Your job contains 1 sequence.
>023772
MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHG
REVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSA
GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELS
DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSD
AHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLLL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023772
(277 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 1243 1.4e-126 1
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 763 1.0e-75 1
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 759 2.7e-75 1
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 754 9.3e-75 1
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 753 1.2e-74 1
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 751 1.9e-74 1
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 749 3.1e-74 1
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 729 4.1e-72 1
WB|WBGene00018014 - symbol:F33G12.2 species:6239 "Caenorh... 620 1.5e-60 1
UNIPROTKB|Q19986 - symbol:F33G12.2 "Protein F33G12.2" spe... 620 1.5e-60 1
FB|FBgn0028897 - symbol:CG4935 species:7227 "Drosophila m... 586 5.9e-57 1
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 513 3.2e-49 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 381 3.1e-35 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 381 3.1e-35 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 381 3.1e-35 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 381 3.1e-35 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 381 3.1e-35 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 381 3.1e-35 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 376 1.1e-34 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 373 2.2e-34 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 362 3.2e-33 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 358 8.5e-33 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 352 3.7e-32 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 352 3.7e-32 1
TAIR|locus:2157762 - symbol:AT5G50230 "AT5G50230" species... 349 8.1e-32 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 343 3.3e-31 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 337 1.4e-30 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 335 2.3e-30 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 333 3.8e-30 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 306 2.8e-27 1
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 301 9.4e-27 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 300 1.2e-26 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 300 1.2e-26 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 300 1.2e-26 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 300 1.2e-26 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 300 1.2e-26 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 300 1.2e-26 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 302 2.5e-26 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 297 2.5e-26 1
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 292 8.4e-26 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 281 1.2e-24 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 281 1.2e-24 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 293 1.9e-24 1
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 281 3.4e-24 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 277 1.1e-23 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 274 1.3e-23 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 274 2.2e-23 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 267 5.0e-23 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 269 7.8e-23 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 268 1.0e-22 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 266 1.3e-22 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 263 1.8e-22 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 262 1.9e-22 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 262 1.9e-22 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 262 2.2e-22 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 259 2.6e-22 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 264 2.8e-22 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 259 4.4e-22 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 256 5.5e-22 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 263 6.9e-22 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 265 7.3e-22 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 263 8.1e-22 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 262 8.8e-22 1
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 259 1.0e-21 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 262 1.0e-21 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 253 1.1e-21 1
ASPGD|ASPL0000058626 - symbol:AN1208 species:162425 "Emer... 257 1.3e-21 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 262 1.3e-21 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 262 1.4e-21 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 257 1.6e-21 1
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 250 2.4e-21 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 248 3.9e-21 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 254 6.2e-21 1
TAIR|locus:2005539 - symbol:PRL1 "AT4G15900" species:3702... 252 6.3e-21 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 249 7.0e-21 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 249 7.0e-21 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 259 7.7e-21 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 247 1.2e-20 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 245 4.3e-20 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 245 4.3e-20 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 253 5.3e-20 1
TAIR|locus:2089303 - symbol:AT3G16650 "AT3G16650" species... 243 5.9e-20 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 237 6.3e-20 1
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 235 9.2e-20 1
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 244 1.1e-19 1
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 241 1.2e-19 1
CGD|CAL0001327 - symbol:orf19.6347 species:5476 "Candida ... 241 1.2e-19 1
FB|FBgn0263933 - symbol:ebi "ebi" species:7227 "Drosophil... 243 1.5e-19 1
TAIR|locus:2194589 - symbol:AT1G10580 "AT1G10580" species... 240 2.0e-19 1
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 239 2.1e-19 1
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 239 2.1e-19 1
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 239 2.1e-19 1
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 239 2.1e-19 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 241 2.7e-19 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 241 3.0e-19 1
UNIPROTKB|F1NQ45 - symbol:CDC40 "Uncharacterized protein"... 238 3.4e-19 1
WB|WBGene00006481 - symbol:plrg-1 species:6239 "Caenorhab... 236 3.8e-19 1
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 237 4.3e-19 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 235 6.2e-19 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 228 6.9e-19 1
WARNING: Descriptions of 1233 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 225/273 (82%), Positives = 253/273 (92%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHG 60
MS ++LP EA++LKGHEGAVLAARFNGDGNY L+CGKDRTIRLWNPHRGI IKTYKSHG
Sbjct: 1 MSATELPTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHG 60
Query: 61 REVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSA 120
REVRDVHVT+DN+K SCGGDRQ++YWDVSTGRVIRKFRGH+ EVNAVKFN+ SSVVVSA
Sbjct: 61 REVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSA 120
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELS 180
G+D+SLR WDCRSHS EP+QIID+F D+VMSV LTKTEIIGGSVDGTVRTFD+R+GRE+S
Sbjct: 121 GFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMS 180
Query: 181 DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSD 240
D+LGQPVNCIS+SNDGNC+LA CLDSTLRLLDR+TGELLQ YKGHI KSFKTDCCLTNSD
Sbjct: 181 DNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSD 240
Query: 241 AHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
AHV GGSEDG ++FWDLVDA V++KF+AH LVV
Sbjct: 241 AHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVV 273
Score = 153 (58.9 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 54/204 (26%), Positives = 96/204 (47%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHRGIHIKTYKSHGREVRDVHVTADN 72
+GH+G V A +FN + +S G DR++R+W+ H ++ + V V +T
Sbjct: 99 RGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLT--K 156
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+++I D + +D+ GR + G VN + + + V++ D +LR D R
Sbjct: 157 TEIIGGSVDGTVRTFDMRIGREMSDNLGQP--VNCISISNDGNCVLAGCLDSTLRLLD-R 213
Query: 133 SHSTEPIQIIDSFQDSVMSV--CLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP-- 186
+ + E +Q+ CLT ++ +IGGS DG V +D+ + LS
Sbjct: 214 T-TGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLV 272
Query: 187 VNCISMSNDGNCILASCLDSTLRL 210
V +S +C+L S +D T+R+
Sbjct: 273 VTSVSYHPKEDCMLTSSVDGTIRV 296
Score = 136 (52.9 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 27 NGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH-GREVR-DVHVTADNSKLISCGGDRQI 84
+ DGN L+ D T+RL + G ++ YK H + + D +T ++ +I D +
Sbjct: 193 SNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLV 252
Query: 85 FYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
F+WD+ +V+ KFR H+ V +V ++ ++++ D ++R W
Sbjct: 253 FFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 140/272 (51%), Positives = 184/272 (67%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
+LPR + L +GAV A RFN DGNYCL+CG D+T++LWNP RG ++TY HG EV
Sbjct: 12 ELPRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVL 71
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D + DNS L S GGD+ + WDV+TG+V+RKFRGH +VN V+FNE ++V++S D
Sbjct: 72 DAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLG 184
S+R WDCRS EP+Q +D +D + SV ++ EI+ GSVDG VR +D+R+G+ SD +G
Sbjct: 132 SVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGRVRRYDLRMGQVTSDYVG 191
Query: 185 QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
P+ C S DG C L S LDSTLRLLD+ TGELL EY GH + +K DCCL+ D HV
Sbjct: 192 SPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHVV 251
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
SEDG ++FWDLV+ S+ S VV+ L
Sbjct: 252 SCSEDGKVFFWDLVEGSLALALPVGSNVVQSL 283
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 139/272 (51%), Positives = 184/272 (67%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
+LP+ L +GAV A RFN DGNYCL+CG D+T++LWNP RG ++TY HG EV
Sbjct: 12 ELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVL 71
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D + DNS L S GGD+ + WDV++G+V+RKFRGH +VN V+FNE ++V++S D
Sbjct: 72 DAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLG 184
S+R WDCRS EP+Q +D +D V SV ++ EI+ GSVDG VR +D+R+G+ SD +G
Sbjct: 132 SIRCWDCRSRRPEPVQTLDEARDGVSSVKVSDHEILAGSVDGRVRRYDLRMGQLFSDYVG 191
Query: 185 QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
P+ C S DG C L S LDSTLRLLD+ TGELL EYKGH + +K DCCL+ D HV
Sbjct: 192 SPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVV 251
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
SEDG ++FWDLV+ ++ S VV+ L
Sbjct: 252 SCSEDGKVFFWDLVEGALALALPVGSGVVQSL 283
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 138/272 (50%), Positives = 183/272 (67%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
+LP+ L +GAV A RFN DGNYCL+CG D+T++LWNP RG ++TY HG EV
Sbjct: 12 ELPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVL 71
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D + DNS L S GGD+ + WDV+TG+V+RKFRGH +VN V+FNE ++V++S D
Sbjct: 72 DAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLG 184
S+R WDCRS EP+Q +D +D + SV ++ EI+ GSVDG VR +D+R+G+ SD +G
Sbjct: 132 SVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGRVRRYDLRMGQVSSDYVG 191
Query: 185 QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
P+ C S DG C L S LDSTLRLLD+ TGELL EY GH + +K DCCL+ D HV
Sbjct: 192 SPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTHVV 251
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
SEDG ++FWDLV+ ++ S VV+ L
Sbjct: 252 SCSEDGKVFFWDLVEGALALALPVGSNVVQSL 283
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 136/272 (50%), Positives = 183/272 (67%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
+LP+ L +GAV A RFN DGNYCL+CG D+T++LWNP RG ++TY HG EV
Sbjct: 12 ELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVL 71
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D + DNS L S GGD+ + WDV++G+V+RKFRGH +VN V+FNE ++V++S D
Sbjct: 72 DAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLG 184
++R WDCRS EP+Q +D +D + SV ++ E++ GSVDG VR +D+R+G+ SD +G
Sbjct: 132 TIRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVG 191
Query: 185 QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
P+ CI S DG C L S LDSTLRLLD+ TGELL EY GH K +K DCCL+ D HV
Sbjct: 192 SPITCICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHVV 251
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
SEDG ++FWDLV+ ++ VV+ L
Sbjct: 252 SCSEDGKVFFWDLVEGALALALPVGPGVVQSL 283
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 136/272 (50%), Positives = 182/272 (66%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
+LP+ L +GAV A RFN DGNYCL+CG D+T++LWNP RG ++TY HG EV
Sbjct: 12 ELPQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVL 71
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D + DNS L S GGD+ + WDV++G+V+RKFRGH +VN V+FNE ++V++S D
Sbjct: 72 DAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLG 184
S+R WDCRS EP+Q +D +D + SV ++ E++ GSVDG VR +D+R+G+ SD +G
Sbjct: 132 SIRCWDCRSRRPEPVQTLDEARDGISSVKVSDHEVLSGSVDGRVRRYDLRMGQLFSDYVG 191
Query: 185 QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
P+ C S DG C L S LDSTLRLLD+ TGELL EY GH + +K DCCL+ D HV
Sbjct: 192 SPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVV 251
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
SEDG +YFWDLV+ ++ VV+ L
Sbjct: 252 SCSEDGKVYFWDLVEGALALALPVGPGVVQSL 283
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 136/272 (50%), Positives = 182/272 (66%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
+LP+ L +GAV A RFN DGNYCL+CG D+T++LWNP RG ++TY HG EV
Sbjct: 12 ELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVL 71
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D + DNS L S GGD+ + WDV++G+V+RKFRGH +VN V+FNE ++V++S D
Sbjct: 72 DAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDS 131
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLG 184
S+R WDCRS EP+Q +D +D + SV ++ E++ GSVDG VR +D+R+G+ SD +G
Sbjct: 132 SVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVG 191
Query: 185 QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
P+ C S DG C L S LDSTLRLLD+ TGELL EY GH + +K DCCL+ D HV
Sbjct: 192 SPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVV 251
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
SEDG ++FWDLV+ +V VV+ L
Sbjct: 252 SCSEDGKVFFWDLVEGVLVLALPVGPSVVQSL 283
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 131/271 (48%), Positives = 184/271 (67%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
LP+ + +GAV A RFN DGNY L+CG D++++LW+ RG +KTY HG EV D
Sbjct: 13 LPQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLD 72
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
+ DNS+L SC D+ + WDV++G+V RK RGH +VN V+FNE ++V++S D +
Sbjct: 73 ADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGT 132
Query: 126 LRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ 185
+R WD RS EPIQI+D QD + S+ +++ E++ GSVDG VR +D+R+G+ D +G
Sbjct: 133 VRCWDTRSRRMEPIQILDESQDGISSLKVSEHELLTGSVDGRVRRYDLRMGQLQVDYIGS 192
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
P+ C+ S DG C L+S LDST+RLLD+STGE+L EY GH+ K +K DCCLT+ D HV
Sbjct: 193 PITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLS 252
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
SEDG++Y+WDLV+ S+ K VV+ L
Sbjct: 253 CSEDGHVYYWDLVEGSLTLKLPVGKAVVQSL 283
>WB|WBGene00018014 [details] [associations]
symbol:F33G12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0019915 HSSP:P16649
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 KO:K13124
OMA:CKQGAVR EMBL:FO080686 RefSeq:NP_494926.1
ProteinModelPortal:Q19986 SMR:Q19986 IntAct:Q19986 STRING:Q19986
EnsemblMetazoa:F33G12.2 GeneID:173867 KEGG:cel:CELE_F33G12.2
UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2 InParanoid:Q19986
NextBio:881457 Uniprot:Q19986
Length = 305
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 117/274 (42%), Positives = 173/274 (63%)
Query: 3 VSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGRE 62
+S P A + +GAV A R+N DGNYC++CG D+T++LWNP + +KTY G E
Sbjct: 1 MSKCPTVRARAIDCKQGAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNE 60
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
V D ++DNS++ + G DR +DV TG+ +R++R H ++VNAV FNE SSVV S
Sbjct: 61 VLDAASSSDNSQIAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSM 120
Query: 123 DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD 182
D +++A+DCRS S +PIQI + D ++S+ + EI+ GS DG R + IR G D
Sbjct: 121 DCTMQAFDCRSRSEKPIQIFNESTDGILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDY 180
Query: 183 LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
+G VN +S + D NC+LA + +RL+D+S+G+LL YKGH +K DC + S H
Sbjct: 181 MGDSVNSVSFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYKLDCRVLQSIEH 240
Query: 243 VTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
V GSEDG++Y + L+D+ +V+K + S V+ L
Sbjct: 241 VASGSEDGFVYVYSLLDSHIVSKLEHPSKVIHSL 274
>UNIPROTKB|Q19986 [details] [associations]
symbol:F33G12.2 "Protein F33G12.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0019915 HSSP:P16649 GeneTree:ENSGT00700000104496
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR EMBL:FO080686
RefSeq:NP_494926.1 ProteinModelPortal:Q19986 SMR:Q19986
IntAct:Q19986 STRING:Q19986 EnsemblMetazoa:F33G12.2 GeneID:173867
KEGG:cel:CELE_F33G12.2 UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2
InParanoid:Q19986 NextBio:881457 Uniprot:Q19986
Length = 305
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 117/274 (42%), Positives = 173/274 (63%)
Query: 3 VSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGRE 62
+S P A + +GAV A R+N DGNYC++CG D+T++LWNP + +KTY G E
Sbjct: 1 MSKCPTVRARAIDCKQGAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNE 60
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
V D ++DNS++ + G DR +DV TG+ +R++R H ++VNAV FNE SSVV S
Sbjct: 61 VLDAASSSDNSQIAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSM 120
Query: 123 DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD 182
D +++A+DCRS S +PIQI + D ++S+ + EI+ GS DG R + IR G D
Sbjct: 121 DCTMQAFDCRSRSEKPIQIFNESTDGILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDY 180
Query: 183 LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
+G VN +S + D NC+LA + +RL+D+S+G+LL YKGH +K DC + S H
Sbjct: 181 MGDSVNSVSFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQNTEYKLDCRVLQSIEH 240
Query: 243 VTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
V GSEDG++Y + L+D+ +V+K + S V+ L
Sbjct: 241 VASGSEDGFVYVYSLLDSHIVSKLEHPSKVIHSL 274
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 104/250 (41%), Positives = 154/250 (61%)
Query: 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLIS 77
+GAV A R+N DG YCLSCG D+ I+LWNP G+ +KTY H EV D + D+S ++S
Sbjct: 17 QGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVS 76
Query: 78 CGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE 137
D+ I YWDVSTG +R+ R H V V FNE SS+ +S G D ++ WD R+ +
Sbjct: 77 ASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLD 136
Query: 138 PIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGN 197
P+Q++ +D + +V + I S+DG VRT+DIRVG D +G+P+ ++ + D
Sbjct: 137 PVQVMKEARDCITTVATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITYLAQTRDEQ 196
Query: 198 CILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
C++A C DS +RLLD TG LL EY+GH + +C + ++DA + GS DG + +DL
Sbjct: 197 CLVAGCQDSVVRLLDCETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDL 256
Query: 258 VDASVVAKFK 267
+D V+ + +
Sbjct: 257 LDGKVLQRIR 266
Score = 169 (64.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 56/217 (25%), Positives = 92/217 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH V A + D +Y +S D++I W+ G ++ +SH VR V D+S
Sbjct: 57 GHADEVTDAAGSCDSSYIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIA 116
Query: 76 ISCGGDRQIFYWDVSTGRV--IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
IS G D + WD+ T R+ ++ + + V NE + + +A D +R +D R
Sbjct: 117 ISGGRDNAVMCWDIRTRRLDPVQVMKEARDCITTVATNE--NRIYAASLDGCVRTYDIRV 174
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP----- 186
D + + + T+ E ++ G D VR D G LS+ G
Sbjct: 175 GELT----CDKIGEPITYLAQTRDEQCLVAGCQDSVVRLLDCETGGLLSEYRGHRGDDYH 230
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223
+ C +SND + S D + D G++LQ +
Sbjct: 231 IECGILSNDAQIVTGSS-DGDAFVYDLLDGKVLQRIR 266
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 94/233 (40%), Positives = 142/233 (60%)
Query: 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQI 84
++N G Y L+ G +R +RLWN G I Y HG E+ D+ + D++K SCGGD+ I
Sbjct: 21 KYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFI 80
Query: 85 FYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDS 144
WDV+TG+V R+ GH +++N +++NE SS++ S +D +R WDCRS+S PIQ++
Sbjct: 81 QVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQVLAD 140
Query: 145 FQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCL 204
+DSV S+ + + I+ GS DGT+RT+DIR G SD P+ + S + L S L
Sbjct: 141 AKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLSSDYFSHPITSVKTSKSASFSLISSL 200
Query: 205 DSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
+S++ LLD+ TG++L+ Y G ++ S+ V GSEDG +Y WDL
Sbjct: 201 NSSIHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDL 253
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 38/173 (21%), Positives = 73/173 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH +L D SCG D+ I++W+ + G + H ++ + D+S L
Sbjct: 54 GHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSIL 113
Query: 76 ISCGGDRQIFYWDVSTGRV--IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
S D ++ WD + I+ + V+++ E+ ++V+ D +LR +D R
Sbjct: 114 ASGSFDSKVRLWDCRSNSFSPIQVLADAKDSVSSIDIAEH--LIVTGSTDGTLRTYDIRK 171
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIG--GSVDGTVRTFDIRVGRELSDDLG 184
+ D F + SV +K+ S++ ++ D G+ L +G
Sbjct: 172 GTLSS----DYFSHPITSVKTSKSASFSLISSLNSSIHLLDQETGKILKSYIG 220
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 87/269 (32%), Positives = 143/269 (53%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV + +F+ +G + S D+ I++W + G KT H + DV ++D++
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 74
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D+ + WDVS+G+ ++ +GH + V FN S+++VS +D+S+R WD ++
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 134
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
++ + + D V +V + + I+ S DG R +D G + L DD PV+
Sbjct: 135 GKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 192
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILA+ LD+TL+L D S G+ L+ Y GH K+ K C N +
Sbjct: 193 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH--KNEKY-CIFANFSVTGGKWIV 249
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GSED +Y W+L +V K + H+ VV
Sbjct: 250 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 278
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 63/249 (25%), Positives = 109/249 (43%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ + ++ D N +S D+T+++W+ G +KT K H V + ++
Sbjct: 57 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 116
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG+ ++ H V+AV FN S++VS+ YD R WD S
Sbjct: 117 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
+ID V V + I+ ++D T++ +D G+ L G C
Sbjct: 177 GQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 235
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D+ + + + T E++Q+ +GH T C T +
Sbjct: 236 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 295
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 296 ENDKTIKLW 304
Score = 167 (63.8 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T H + V V + + L S D+ I W G+ + GH+ ++ V ++ S
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 73
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD 172
+++VSA D++L+ WD S ++ + + V I+ GS D +VR +D
Sbjct: 74 NLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Query: 173 IRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
++ G+ L PV+ + + DG+ I++S D R+ D ++G+ L+
Sbjct: 132 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 181
Score = 140 (54.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV--HVTADNSKLISCGG-D 81
+F+ +G Y L+ D T++LW+ +G +KTY H E + + + K I G D
Sbjct: 195 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 254
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAW--DC 131
++ W++ T +++K +GH V + + +++ SA D++++ W DC
Sbjct: 255 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 308
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 87/269 (32%), Positives = 143/269 (53%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV + +F+ +G + S D+ I++W + G KT H + DV ++D++
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D+ + WDVS+G+ ++ +GH + V FN S+++VS +D+S+R WD ++
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
++ + + D V +V + + I+ S DG R +D G + L DD PV+
Sbjct: 161 GKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILA+ LD+TL+L D S G+ L+ Y GH K+ K C N +
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH--KNEKY-CIFANFSVTGGKWIV 275
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GSED +Y W+L +V K + H+ VV
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 63/249 (25%), Positives = 109/249 (43%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ + ++ D N +S D+T+++W+ G +KT K H V + ++
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG+ ++ H V+AV FN S++VS+ YD R WD S
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
+ID V V + I+ ++D T++ +D G+ L G C
Sbjct: 203 GQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D+ + + + T E++Q+ +GH T C T +
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 322 ENDKTIKLW 330
Score = 167 (63.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T H + V V + + L S D+ I W G+ + GH+ ++ V ++ S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD 172
+++VSA D++L+ WD S ++ + + V I+ GS D +VR +D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 173 IRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
++ G+ L PV+ + + DG+ I++S D R+ D ++G+ L+
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 140 (54.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV--HVTADNSKLISCGG-D 81
+F+ +G Y L+ D T++LW+ +G +KTY H E + + + K I G D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAW--DC 131
++ W++ T +++K +GH V + + +++ SA D++++ W DC
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 87/269 (32%), Positives = 143/269 (53%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV + +F+ +G + S D+ I++W + G KT H + DV ++D++
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D+ + WDVS+G+ ++ +GH + V FN S+++VS +D+S+R WD ++
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
++ + + D V +V + + I+ S DG R +D G + L DD PV+
Sbjct: 161 GKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILA+ LD+TL+L D S G+ L+ Y GH K+ K C N +
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH--KNEKY-CIFANFSVTGGKWIV 275
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GSED +Y W+L +V K + H+ VV
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 63/249 (25%), Positives = 109/249 (43%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ + ++ D N +S D+T+++W+ G +KT K H V + ++
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG+ ++ H V+AV FN S++VS+ YD R WD S
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
+ID V V + I+ ++D T++ +D G+ L G C
Sbjct: 203 GQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D+ + + + T E++Q+ +GH T C T +
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 322 ENDKTIKLW 330
Score = 167 (63.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T H + V V + + L S D+ I W G+ + GH+ ++ V ++ S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD 172
+++VSA D++L+ WD S ++ + + V I+ GS D +VR +D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 173 IRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
++ G+ L PV+ + + DG+ I++S D R+ D ++G+ L+
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 140 (54.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV--HVTADNSKLISCGG-D 81
+F+ +G Y L+ D T++LW+ +G +KTY H E + + + K I G D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAW--DC 131
++ W++ T +++K +GH V + + +++ SA D++++ W DC
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 87/269 (32%), Positives = 143/269 (53%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV + +F+ +G + S D+ I++W + G KT H + DV ++D++
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D+ + WDVS+G+ ++ +GH + V FN S+++VS +D+S+R WD ++
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
++ + + D V +V + + I+ S DG R +D G + L DD PV+
Sbjct: 161 GKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILA+ LD+TL+L D S G+ L+ Y GH K+ K C N +
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH--KNEKY-CIFANFSVTGGKWIV 275
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GSED +Y W+L +V K + H+ VV
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 63/249 (25%), Positives = 109/249 (43%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ + ++ D N +S D+T+++W+ G +KT K H V + ++
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG+ ++ H V+AV FN S++VS+ YD R WD S
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
+ID V V + I+ ++D T++ +D G+ L G C
Sbjct: 203 GQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D+ + + + T E++Q+ +GH T C T +
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 322 ENDKTIKLW 330
Score = 167 (63.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T H + V V + + L S D+ I W G+ + GH+ ++ V ++ S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD 172
+++VSA D++L+ WD S ++ + + V I+ GS D +VR +D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 173 IRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
++ G+ L PV+ + + DG+ I++S D R+ D ++G+ L+
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 140 (54.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV--HVTADNSKLISCGG-D 81
+F+ +G Y L+ D T++LW+ +G +KTY H E + + + K I G D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAW--DC 131
++ W++ T +++K +GH V + + +++ SA D++++ W DC
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 87/269 (32%), Positives = 143/269 (53%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV + +F+ +G + S D+ I++W + G KT H + DV ++D++
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D+ + WDVS+G+ ++ +GH + V FN S+++VS +D+S+R WD ++
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
++ + + D V +V + + I+ S DG R +D G + L DD PV+
Sbjct: 161 GKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILA+ LD+TL+L D S G+ L+ Y GH K+ K C N +
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH--KNEKY-CIFANFSVTGGKWIV 275
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GSED +Y W+L +V K + H+ VV
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 63/249 (25%), Positives = 109/249 (43%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ + ++ D N +S D+T+++W+ G +KT K H V + ++
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG+ ++ H V+AV FN S++VS+ YD R WD S
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
+ID V V + I+ ++D T++ +D G+ L G C
Sbjct: 203 GQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D+ + + + T E++Q+ +GH T C T +
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 322 ENDKTIKLW 330
Score = 167 (63.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T H + V V + + L S D+ I W G+ + GH+ ++ V ++ S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD 172
+++VSA D++L+ WD S ++ + + V I+ GS D +VR +D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 173 IRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
++ G+ L PV+ + + DG+ I++S D R+ D ++G+ L+
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 140 (54.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV--HVTADNSKLISCGG-D 81
+F+ +G Y L+ D T++LW+ +G +KTY H E + + + K I G D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAW--DC 131
++ W++ T +++K +GH V + + +++ SA D++++ W DC
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 87/269 (32%), Positives = 143/269 (53%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV + +F+ +G + S D+ I++W + G KT H + DV ++D++
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D+ + WDVS+G+ ++ +GH + V FN S+++VS +D+S+R WD ++
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
++ + + D V +V + + I+ S DG R +D G + L DD PV+
Sbjct: 161 GKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILA+ LD+TL+L D S G+ L+ Y GH K+ K C N +
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH--KNEKY-CIFANFSVTGGKWIV 275
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GSED +Y W+L +V K + H+ VV
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 63/249 (25%), Positives = 109/249 (43%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ + ++ D N +S D+T+++W+ G +KT K H V + ++
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG+ ++ H V+AV FN S++VS+ YD R WD S
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
+ID V V + I+ ++D T++ +D G+ L G C
Sbjct: 203 GQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D+ + + + T E++Q+ +GH T C T +
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 322 ENDKTIKLW 330
Score = 167 (63.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T H + V V + + L S D+ I W G+ + GH+ ++ V ++ S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD 172
+++VSA D++L+ WD S ++ + + V I+ GS D +VR +D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 173 IRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
++ G+ L PV+ + + DG+ I++S D R+ D ++G+ L+
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 140 (54.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/114 (26%), Positives = 59/114 (51%)
Query: 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV--HVTADNSKLISCGG-D 81
+F+ +G Y L+ D T++LW+ +G +KTY H E + + + K I G D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAW--DC 131
++ W++ T +++K +GH V + + +++ SA D++++ W DC
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 87/266 (32%), Positives = 140/266 (52%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV A +F+ +G + S D+ I++W + G KT H + DV ++D+
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 127
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D+ + W++STG+ ++ +GH + V FN S+++VS +D+S+R WD R+
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 187
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
++ + + D V +V + + I+ S DG R +D G + L DD PV+
Sbjct: 188 GKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 245
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILA+ LD+TL+L D S G+ L+ Y GH K+ K C N +
Sbjct: 246 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH--KNEKY-CIFANFSVTGGKWIV 302
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHS 270
GSED +Y W+L VV K + H+
Sbjct: 303 SGSEDNMVYIWNLQSKEVVQKLQGHT 328
Score = 214 (80.4 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 61/249 (24%), Positives = 107/249 (42%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ + ++ D +S D+T+++W G +KT K H V + ++
Sbjct: 110 ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSN 169
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG+ ++ H V+AV FN S++VS+ YD R WD S
Sbjct: 170 LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 229
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
+ID V V + I+ ++D T++ +D G+ L G C
Sbjct: 230 GQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 288
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D+ + + + + E++Q+ +GH T C T +
Sbjct: 289 IFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAAL 348
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 349 ENDKTIKLW 357
Score = 158 (60.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 41/170 (24%), Positives = 80/170 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T H + V V + + L S D+ I W G+ + GH+ ++ V ++ S
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD 172
++VS D++L+ W+ + + ++ + + V I+ GS D +VR +D
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKS--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 173 IRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
+R G+ L PV+ + + DG+ I++S D R+ D ++G+ L+
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 234
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 87/269 (32%), Positives = 142/269 (52%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV + +F+ +G + S D+ I++W + G KT H + DV ++D++
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D+ + WDVS+G+ ++ +GH + V FN S+++VS +D+S+R WD ++
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
++ + + D V +V + + I+ S DG R +D G + L DD PV+
Sbjct: 161 GKC--LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILA+ LD+TL+L D S G+ L+ Y H K+ K C N +
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCH--KNEKY-CIFANFSVTGGKWIV 275
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GSED +Y W+L VV K + H+ VV
Sbjct: 276 SGSEDNLVYIWNLQTKEVVQKLQGHTDVV 304
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 62/249 (24%), Positives = 108/249 (43%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ + ++ D N +S D+T+++W+ G +KT K H V + ++
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG+ ++ H V+AV FN S++VS+ YD R WD S
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
+ID V V + I+ ++D T++ +D G+ L C
Sbjct: 203 GQCLKT-LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYC 261
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D+ + + + T E++Q+ +GH T C T +
Sbjct: 262 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 322 ENDKTIKLW 330
Score = 167 (63.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T H + V V + + L S D+ I W G+ + GH+ ++ V ++ S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD 172
+++VSA D++L+ WD S ++ + + V I+ GS D +VR +D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 173 IRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
++ G+ L PV+ + + DG+ I++S D R+ D ++G+ L+
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 140 (54.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 31/114 (27%), Positives = 59/114 (51%)
Query: 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV--HVTADNSKLISCGG-D 81
+F+ +G Y L+ D T++LW+ +G +KTY H E + + + K I G D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAW--DC 131
++ W++ T V++K +GH V + + +++ SA D++++ W DC
Sbjct: 281 NLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC 334
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 87/272 (31%), Positives = 145/272 (53%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH A+ + +F+ +G + S D I +W + G KT H E+ DV ++D+S
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+L+S D+ + WD+ +G+ ++ +GH V FN S+++VS +D+S++ W+ ++
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Query: 134 HSTEPIQIIDSFQDSVMSV---CLTKTEIIGGSVDGTVRTFDIRVG---RELSDDLGQPV 187
++ + + D + +V C + I+ GS DG R +D G R L+D+ PV
Sbjct: 155 GKC--LKTLSAHSDPISAVNFNC-NGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPV 211
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG-- 245
+ + S +G IL + LD+TL+L D S G L+ Y GH K+ K CL S + VTG
Sbjct: 212 SFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGH--KNEKY--CLFASFS-VTGRK 266
Query: 246 ----GSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GSED +Y W+L +V + + H+ VV
Sbjct: 267 WVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVV 298
Score = 196 (74.1 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 60/249 (24%), Positives = 104/249 (41%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH + ++ D + +S D+T+++W+ G +KT K H V ++
Sbjct: 77 LYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSN 136
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + W+V TG+ ++ H ++AV FN S++VS YD R WD S
Sbjct: 137 LIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAAS 196
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
+ D V V + I+ ++D T++ +D GR L G C
Sbjct: 197 GQCLRT-LADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYC 255
Query: 190 I--SMSNDGN-CILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
+ S S G +++ D+ + + + T E++Q +GH C T +
Sbjct: 256 LFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAAL 315
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 316 ENDKTIKVW 324
Score = 165 (63.1 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 49/229 (21%), Positives = 99/229 (43%)
Query: 47 PHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVN 106
P+ + + T H + V + + L S D I W G + GH E++
Sbjct: 27 PNYALRL-TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEIS 85
Query: 107 AVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSV 164
V ++ SS +VSA D++L+ WD RS ++ + D V I+ GS
Sbjct: 86 DVAWSSDSSRLVSASDDKTLKVWDMRSGKC--LKTLKGHSDFVFCCDFNPPSNLIVSGSF 143
Query: 165 DGTVRTFDIRVGRELS--DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEY 222
D +V+ ++++ G+ L P++ ++ + +G+ I++ D R+ D ++G+ L+
Sbjct: 144 DESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL 203
Query: 223 --KGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
+G+ SF + + ++ + D + WD + + H
Sbjct: 204 ADEGNPPVSFVK---FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGH 249
Score = 138 (53.6 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 29/114 (25%), Positives = 58/114 (50%)
Query: 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT--ADNSKLISCGG-D 81
+F+ +G Y L+ D T++LW+ RG +KTY H E + + K + G D
Sbjct: 215 KFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSED 274
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAW--DC 131
++ W++ T ++++ +GH V + + +++ SA D++++ W DC
Sbjct: 275 NMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSSDC 328
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 85/271 (31%), Positives = 145/271 (53%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
LKGH ++ + +F+ DG + S D+TI++W + G +T + H + D+ + D+
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSK 101
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+ S D+ I WDV +G++++ +GH+ V V FN S+++VS +D+++R WD
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDV-- 159
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGREL---SDDLGQPVN 188
++ E ++I + D V V + T ++ GS DGTVR +D G+ L S + G+ V+
Sbjct: 160 NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVS 219
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGE-LLQEYKGHICKSFKTDCCLTNSDAHVTG-- 245
+ S +G +LA LD+TLRL + + L+ Y GH K+ K C+ ++ + G
Sbjct: 220 FVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGH--KNEKY--CIFSTFSVTCGKW 275
Query: 246 ---GSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GSED IY ++L +V H VV
Sbjct: 276 IVTGSEDNLIYIYNLQTREIVQTLAGHEDVV 306
Score = 194 (73.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 43/169 (25%), Positives = 80/169 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T K H + + V + D L S D+ I W G+ R GH+ ++ + +++ S
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD 172
++ SA D++++ WD S ++ + ++ V V I+ GS D VR +D
Sbjct: 101 KLICSASDDKTIKIWDVESGKM--VKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 173 IRVGR--ELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
+ G ++ PV + + DG +++ D T+R+ D +TG+LL
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL 207
Score = 123 (48.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 38/162 (23%), Positives = 75/162 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH-GREVRDVHVTAD 71
++ H V FN DG +S D T+R+W+ G + T + G+EV V +
Sbjct: 167 MISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSP- 225
Query: 72 NSKLISCGG-DRQIFYWDVSTGR-VIRKFRGHESEVNAVKFNEYSSV----VVSAGYDQS 125
N K + G D + W + + ++ + GH++E + F+ +S +V+ D
Sbjct: 226 NGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI-FSTFSVTCGKWIVTGSEDNL 284
Query: 126 LRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVD 165
+ ++ ++ E +Q + +D V++V TE I G+++
Sbjct: 285 IYIYNLQTR--EIVQTLAGHEDVVLTVACHPTENIIASGALE 324
Score = 112 (44.5 bits), Expect = 0.00069, P = 0.00068
Identities = 31/125 (24%), Positives = 60/125 (48%)
Query: 12 NVLKGHEGAVLA-ARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVT 69
N + +G ++ +F+ +G + L+ D T+RLW+ + +KTY H E + T
Sbjct: 208 NTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFST 267
Query: 70 ADNS--KLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQ 124
+ K I G D I+ +++ T +++ GHE V V + +++ S D+
Sbjct: 268 FSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDR 327
Query: 125 SLRAW 129
S++ W
Sbjct: 328 SVKIW 332
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 85/266 (31%), Positives = 138/266 (51%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+GH ++ +A+F+ G Y + D+T+++WN I +T H V D+ ++D+
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D+ + +++ T R+ + +GH + V FN SS+VVS +D+S+R WD ++
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
I+ + + D V +V + + I GS DG VR +D G + L DD PV
Sbjct: 203 GMC--IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILAS LDSTL+L D S G+ L++Y GH + C N +
Sbjct: 261 FVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKY---CIFANFSVTGGKWII 317
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHS 270
GSED IY W+L +V + H+
Sbjct: 318 SGSEDCKIYIWNLQTREIVQCLEGHT 343
Score = 204 (76.9 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 62/250 (24%), Positives = 106/250 (42%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH+ V ++ D +S D+T++++ KT K H V + +S
Sbjct: 125 LTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS 184
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG I+ H V+AV FN S++ S YD +R WD +
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
++D V V + I+ ++D T++ +D G+ L G + C
Sbjct: 245 GQCIKT-LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D + + + T E++Q +GH +DC + +G
Sbjct: 304 IFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNII-ASGA 362
Query: 247 SE-DGYIYFW 255
E D I+ W
Sbjct: 363 LEPDNKIHIW 372
Score = 130 (50.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 36/169 (21%), Positives = 80/169 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T + H + + + L + D+ + W++ R GH+ VN + ++ S
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 115 SVVVSAGYDQSLRAWDC-RSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
VVSA D++L+ ++ S T+ ++ +++ + + ++ GS D +VR +D+
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYV-FCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 174 RVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
+ G + PV+ +S + DG+ I + D +R+ D + G+ ++
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIK 249
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 85/266 (31%), Positives = 138/266 (51%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+GH ++ +A+F+ G Y + D+T+++WN I +T H V D+ ++D+
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D+ + +++ T R+ + +GH + V FN SS+VVS +D+S+R WD ++
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 134 HSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVN 188
I+ + + D V +V + + I GS DG VR +D G + L DD PV
Sbjct: 203 GMC--IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH----VT 244
+ S +G ILAS LDSTL+L D S G+ L++Y GH + C N +
Sbjct: 261 FVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKY---CIFANFSVTGGKWII 317
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHS 270
GSED IY W+L +V + H+
Sbjct: 318 SGSEDCKIYIWNLQTREIVQCLEGHT 343
Score = 204 (76.9 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 62/250 (24%), Positives = 106/250 (42%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH+ V ++ D +S D+T++++ KT K H V + +S
Sbjct: 125 LTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS 184
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D + WDV TG I+ H V+AV FN S++ S YD +R WD +
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN--C 189
++D V V + I+ ++D T++ +D G+ L G + C
Sbjct: 245 GQCIKT-LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I + G I++ D + + + T E++Q +GH +DC + +G
Sbjct: 304 IFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNII-ASGA 362
Query: 247 SE-DGYIYFW 255
E D I+ W
Sbjct: 363 LEPDNKIHIW 372
Score = 130 (50.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 36/169 (21%), Positives = 80/169 (47%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS 114
T + H + + + L + D+ + W++ R GH+ VN + ++ S
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 115 SVVVSAGYDQSLRAWDC-RSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
VVSA D++L+ ++ S T+ ++ +++ + + ++ GS D +VR +D+
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYV-FCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 174 RVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
+ G + PV+ +S + DG+ I + D +R+ D + G+ ++
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIK 249
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 349 (127.9 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 87/273 (31%), Positives = 144/273 (52%)
Query: 4 SDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKT-YKSHGRE 62
S +P T AN + HEG + F + + G+DR +++W+ + G IK+ Y S G
Sbjct: 211 STIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGN- 269
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV-VVSAG 121
+ D+ VT DN +I+ +F WDVS+GRV GH +V AV +++SS VVSA
Sbjct: 270 ILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAA 329
Query: 122 YDQSLRAWDC-RSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTFDIRVGRE 178
YD++++ WD + + T + F + ++CL+ + G +DG +R +DI+ G+
Sbjct: 330 YDRTIKLWDLHKGYCTNTVL----FTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKL 385
Query: 179 LSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK--GHICKSFKTDC 234
LS+ G V +S+S +GN IL S D+ + D T E+ + G+ S +
Sbjct: 386 LSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRS 445
Query: 235 CLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFK 267
C++ D +V GS DG ++ W L ++V+ K
Sbjct: 446 CISPDDDYVAAGSADGSVHVWSLSKGNIVSILK 478
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 81/271 (29%), Positives = 145/271 (53%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTADN 72
L+GHEG + A F+ +G LS G DR I +W + ++ H V + H T D
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD-QSLRAWDC 131
S + +C D+ + +WD++TG+ R+F+GH + VN+V+ + ++ +G D ++++ WD
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDA 170
Query: 132 RS-HSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP-- 186
R H+ ++ FQ V +VC T ++I G +D V+ +DIR L G
Sbjct: 171 RKKHAAHTLE--SPFQ--VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDT 226
Query: 187 VNCISMSNDGNCILASCLDSTLRLLD-R--STGE-LLQEYKGHICKSFKTD---CCLTNS 239
+ +S+S +G+ IL + +D+TLR+ D R + GE ++ ++GH +F+ + C +
Sbjct: 227 ITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQ-HNFEKNLLRCAWSPG 285
Query: 240 DAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+T GS D ++Y WD+ ++ K H+
Sbjct: 286 SDKITSGSADRHVYIWDVNTRRILYKLPGHN 316
Score = 151 (58.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 33/121 (27%), Positives = 62/121 (51%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHR-GIH-IKTYKSHGREVRDVHV- 68
L+GH + + +G++ L+ D T+R+W+ P+ G +K ++ H +
Sbjct: 220 LRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLR 279
Query: 69 ---TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
+ + K+ S DR ++ WDV+T R++ K GH VNAV F+ +++S D++
Sbjct: 280 CAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKT 339
Query: 126 L 126
L
Sbjct: 340 L 340
Score = 135 (52.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 44/183 (24%), Positives = 79/183 (43%)
Query: 95 IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL 154
I + GHE E+ +F+ +++S+G+D+ + W E + + +VM
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYE-DCENVMAMSGHSGAVMEAHF 106
Query: 155 TK--TEIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLR 209
T + I S D T+ +DI G+ G VN + S G +L S D T++
Sbjct: 107 TPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIK 166
Query: 210 LLDRSTGELLQEYKGHICKS-FK-TDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFK 267
+ D +++ H +S F+ T C ++ V G D + WD+ +V+ +
Sbjct: 167 IWDAR-----KKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLR 221
Query: 268 AHS 270
HS
Sbjct: 222 GHS 224
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 54/240 (22%), Positives = 93/240 (38%)
Query: 22 LAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGD 81
L A N D L G RT L P I + H E+ + L+S G D
Sbjct: 23 LMAYTNRD-KALLESGVRRTSNLQAP-----IMQLEGHEGEIFTAEFHPEGELLLSSGFD 76
Query: 82 RQIFYWDVSTG-RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEP-I 139
RQI+ W V + GH V F S + + D++L WD + +
Sbjct: 77 RQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRF 136
Query: 140 QIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGN 197
+ +F +SV + + GS D T++ +D R + + L P V + + G
Sbjct: 137 KGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK-KHAAHTLESPFQVTAVCFGDTGE 195
Query: 198 CILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
+++ +D+ +++ D +L +GH T L+ + + D + WD+
Sbjct: 196 QVISGGIDNEVKIWDIRKQAVLHHLRGH--SDTITGMSLSPEGDFILTNAMDNTLRVWDV 253
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 78/271 (28%), Positives = 136/271 (50%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P L+GH A+ +F+ DGN S D+T+ LW+ I Y+ H + D+
Sbjct: 32 PYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDL 91
Query: 67 HVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
++D+ S D + WD S ++ RGH + V V FN S+++VS +D++
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDET 151
Query: 126 LRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELS 180
+R W+ ++ +++I + + SV + + I+ S DG+ + +D + G + L
Sbjct: 152 IRIWEVKTGKC--VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
Query: 181 DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK-TDCCLTNS 239
DD V+ S +G IL + LDSTL+L + +TG+ L+ Y GH K F T +
Sbjct: 210 DDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTN 269
Query: 240 DAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
++ GSED +Y WDL +++ + + H+
Sbjct: 270 GKYIVSGSEDNCVYLWDLQARNILQRLEGHT 300
Score = 219 (82.2 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 60/249 (24%), Positives = 109/249 (43%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADNS 73
+GH + ++ D +Y S D T+R+W+ +K + H V V+ ++
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D I W+V TG+ +R + H +++V FN S++VSA +D S + WD +
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNC 189
T +ID +V + I+ ++D T++ + G+ L G V C
Sbjct: 202 -GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFC 260
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
I+ + +G I++ D+ + L D +LQ +GH C ++ +G
Sbjct: 261 ITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGN 320
Query: 247 SEDGYIYFW 255
D I W
Sbjct: 321 HLDKTIRIW 329
Score = 198 (74.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 49/201 (24%), Positives = 95/201 (47%)
Query: 24 ARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQ 83
A N GN G + ++ P+R H+KT + H + V + D + L S D+
Sbjct: 13 ANANSTGN----AGTSGNVPIYKPYR--HLKTLEGHTAAISCVKFSNDGNLLASASVDKT 66
Query: 84 IFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIID 143
+ W + +I ++ GH S ++ + ++ S SA D +LR WD RS E ++++
Sbjct: 67 MILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS-PYECLKVLR 125
Query: 144 SFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGR--ELSDDLGQPVNCISMSNDGNCI 199
+ V V I+ GS D T+R ++++ G+ + P++ + + DG+ I
Sbjct: 126 GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLI 185
Query: 200 LASCLDSTLRLLDRSTGELLQ 220
+++ D + ++ D G L+
Sbjct: 186 VSASHDGSCKIWDAKEGTCLK 206
Score = 154 (59.3 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 51/210 (24%), Positives = 90/210 (42%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL+GH V FN N +S D TIR+W G ++ K+H + VH D
Sbjct: 123 VLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDG 182
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESE-VNAVKFNEYSSVVVSAGYDQSLRAWDC 131
S ++S D WD G ++ +S V+ KF+ ++ A D +L+
Sbjct: 183 SLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL--- 239
Query: 132 RSHSTEP-IQIIDSFQDSVMSVC----LTKTE-IIGGSVDGTVRTFDIRVGRELS----- 180
+++T +++ + V + +T + I+ GS D V +D++ L
Sbjct: 240 SNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGH 299
Query: 181 DDLGQPVNCISMSNDGNCILASCLDSTLRL 210
D V+C + N+ + + LD T+R+
Sbjct: 300 TDAVISVSCHPVQNEISSS-GNHLDKTIRI 328
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 80/284 (28%), Positives = 139/284 (48%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW-----NPHRGIHIKTY 56
+ S P + L H AV + +F+ DG S D+TIR + N ++ +
Sbjct: 8 TASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEF 67
Query: 57 KSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116
H + DV ++D ++S D+ + WDV TG +I+ GH + V FN S++
Sbjct: 68 TGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNM 127
Query: 117 VVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIR 174
+VS +D+++R WD + ++++ + D V +V + + I+ S DG R +D
Sbjct: 128 IVSGSFDETVRIWDVTTGKC--LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 175 VG---RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSF- 230
G + L DD PV+ + S +G IL LD+TLRL + S+ + L+ Y GH+ +
Sbjct: 186 TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYC 245
Query: 231 -KTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
+ +TN + GSED ++ W+L ++ K + H+ V
Sbjct: 246 ISSAFSVTNGK-RIVSGSEDNCVHMWELNSKKLLQKLEGHTETV 288
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 69/249 (27%), Positives = 117/249 (46%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GHE + F+ D + +S D+T++LW+ G IKT H V+ ++ +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS-H 134
+S D + WDV+TG+ ++ H V AV FN S++VS+ YD R WD + H
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGH 188
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVN---C 189
+ + ID V V + I+ G++D T+R ++I + L G VN C
Sbjct: 189 CVKTL--IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH-VNAQYC 245
Query: 190 ISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
IS + +G I++ D+ + + + ++ +LLQ+ +GH C T + + G
Sbjct: 246 ISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTEN--LIASG 303
Query: 247 SEDGYIYFW 255
S D + W
Sbjct: 304 SLDKTVRIW 312
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 81/271 (29%), Positives = 137/271 (50%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ ++GH ++ A +F+ G + + D+T+++WN +T H V D +AD
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSAD 132
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+ +++ D+ + ++V T ++ + +GH + V FN SS+VVS +D+S+R WD
Sbjct: 133 SKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDV 192
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG---RELSDDLGQP 186
R+ ++ + + D V +V + + I GS DG VR +D G + L DD P
Sbjct: 193 RTGMC--VKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPP 250
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH---- 242
V + S +G IL+S LD+TL+L D G+ L++Y+GH + C N
Sbjct: 251 VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKY---CIFANFSVTGGKW 307
Query: 243 VTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
+ GSED IY W+L VV + H+ V
Sbjct: 308 IISGSEDCKIYVWNLQTKEVVQSLEGHTQAV 338
Score = 201 (75.8 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 67/263 (25%), Positives = 113/263 (42%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
++SDL E L GH+ V ++ D ++ D+T++++ KT K H
Sbjct: 107 NMSDLS-CE-RTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTN 164
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
V + +S ++S D + WDV TG ++ H V+AV FN S++ S
Sbjct: 165 YVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGS 224
Query: 122 YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGREL 179
YD +R WD + ++D V V + I+ ++D T++ +D G+ L
Sbjct: 225 YDGLVRIWDTANGQCVKT-LVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTL 283
Query: 180 SDDLGQPVN--CISMS---NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDC 234
G N CI + G I++ D + + + T E++Q +GH +DC
Sbjct: 284 KQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDC 343
Query: 235 C-LTNSDAHVTGGSE-DGYIYFW 255
+ N A +G E D I W
Sbjct: 344 HPMQNMIA--SGALEPDNTIRIW 364
Score = 165 (63.1 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 1 MSVSDLPRTE-ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH 59
+ + ++P + A LKGH V FN + +S D ++R+W+ G+ +KT +H
Sbjct: 145 LKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAH 204
Query: 60 GREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESE-VNAVKFNEYSSVVV 118
V V D S + S D + WD + G+ ++ E+ V VKF+ ++
Sbjct: 205 SDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYIL 264
Query: 119 SAGYDQSLRAWD 130
S+ D +L+ WD
Sbjct: 265 SSNLDNTLKLWD 276
Score = 130 (50.8 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 37/172 (21%), Positives = 78/172 (45%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNE 112
I T + H + + V + L + D+ + W++S R GH+ VN ++
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA 131
Query: 113 YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRT 170
S +V+A D++L+ ++ + + + + + V ++ GS D +VR
Sbjct: 132 DSKSIVTASDDKTLKIYEVPT--VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 171 FDIRVGR--ELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
+D+R G + PV+ +S + DG+ I + D +R+ D + G+ ++
Sbjct: 190 WDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVK 241
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 21 VLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV--HVTADNSKLISC 78
V +F+ +G Y LS D T++LW+ +G +K Y+ H + + + K I
Sbjct: 251 VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIIS 310
Query: 79 GG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAWDCRSHS 135
G D +I+ W++ T V++ GH V A + +++ S D ++R W RS S
Sbjct: 311 GSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW--RSDS 368
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 35/175 (20%), Positives = 73/175 (41%)
Query: 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV 152
++I GH ++AVKF+ + ++ D++++ W+ S E + +
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 153 CLTKTEIIGGSVDGTVRTFDI---RVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLR 209
I+ S D T++ +++ ++ + L V C + + + +++ D ++R
Sbjct: 130 SADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNY-VFCCNFNPQSSLVVSGSFDESVR 188
Query: 210 LLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH-VTGGSEDGYIYFWDLVDASVV 263
+ D TG ++ H S N D +T GS DG + WD + V
Sbjct: 189 IWDVRTGMCVKTLPAH---SDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCV 240
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 76/273 (27%), Positives = 137/273 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GHEG V +F+ GN S G DR I LWN + + T K H V ++H D
Sbjct: 88 LLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 147
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWD 130
S L S D+ + WD TG +++ +GH S VN+ +V G D +++ WD
Sbjct: 148 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 131 CRSHSTEPIQIIDSFQDS--VMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP 186
R + + +FQ++ V++V T +II G +D ++ +D+R + G
Sbjct: 208 IRKKAA-----VQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA 262
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD-RSTG---ELLQEYKGHICKSFKTD---CCLT 237
V +S+S++G+ +L++ +D+T+R+ D R ++ ++G++ +F+ + C +
Sbjct: 263 DSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWS 321
Query: 238 NSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ + GGS D ++Y WD ++ K H+
Sbjct: 322 PDGSKIAGGSADRFVYVWDTTSRRILYKLPGHA 354
Score = 148 (57.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 37/135 (27%), Positives = 65/135 (48%)
Query: 1 MSVSDLPRTEAN-VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--P----HRGIHI 53
+ V DL + + ++GH +V + +G+Y LS D T+R+W+ P R + I
Sbjct: 244 IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKI 303
Query: 54 KTYKSHGREVRDVHVT--ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
H E + + D SK+ DR ++ WD ++ R++ K GH VN + F+
Sbjct: 304 FQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFH 363
Query: 112 EYSSVVVSAGYDQSL 126
+++SA D+ L
Sbjct: 364 PEEPIILSASSDKRL 378
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 53/148 (35%), Positives = 95/148 (64%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL H G+V ++N DG YCLS D++I+L+N +G I +++ HG + D+ T+DN
Sbjct: 9 VLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLVSTSDN 68
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRG-HESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+L SC ++Q++ WD+++G+VIR+F+ H + +V N S+++ S D+ ++AWD
Sbjct: 69 KQLFSCA-EKQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSDRLVKAWDL 127
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTEI 159
R+ S P+QI+D +D++ S+ + + I
Sbjct: 128 RTKSINPVQILDDAKDTITSIIVNEQTI 155
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 65/246 (26%), Positives = 124/246 (50%)
Query: 29 DGNYCLSCGKDRTIRLWNPHRGIHIKTYKS-HGREVRDVHVTADNSKLISCGGDRQIFYW 87
D SC ++ + W+ G I+ +++ H + V V D++ L S DR + W
Sbjct: 67 DNKQLFSCA-EKQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSDRLVKAW 125
Query: 88 DVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD 147
D+ T + I + + + + +S++V+ +Q++ H +
Sbjct: 126 DLRT-KSINPVQILDDAKDTI-----TSIIVN---EQTITHNHSHGHGHS-----HGNNN 171
Query: 148 SVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDST 207
+ T+ E+I SVDG +RT+D+R+G ++ + P++ +S++ D C +ASC D T
Sbjct: 172 NNQPHTHTQKEVITSSVDGCIRTYDVRMGTLVTYEDTIPISSVSITKDKKCFIASCTDET 231
Query: 208 LRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFK 267
++L+D + E L+EYKGH K +K + C D+ + GSED Y ++L+ +++K
Sbjct: 232 VKLIDIDSYETLKEYKGHKNKVYKINSCSNFDDSLIISGSEDNDFYIYELLSGKLLSKLS 291
Query: 268 AHSLVV 273
HS ++
Sbjct: 292 GHSNII 297
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/273 (27%), Positives = 137/273 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GHEG V +F+ +G+ S G DR I LWN + + T K H V ++H D
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 120
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWD 130
S L S D+ + WD TG +++ +GH S VN+ +V G D +++ WD
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 131 CRSHSTEPIQIIDSFQDS--VMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP 186
R + I +FQ++ V++V T +II G +D ++ +D+R + G
Sbjct: 181 IRKKAA-----IQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA 235
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD-RSTG---ELLQEYKGHICKSFKTD---CCLT 237
V +S+S++G+ +L++ +D+T+R+ D R ++ ++G++ +F+ + C +
Sbjct: 236 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWS 294
Query: 238 NSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ + GS D ++Y WD ++ K H+
Sbjct: 295 PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 327
Score = 151 (58.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 1 MSVSDLPRTEAN-VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--P----HRGIHI 53
+ V DL + + ++GH +V + +G+Y LS D T+R+W+ P R + I
Sbjct: 217 IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 276
Query: 54 KTYKSHGREVRDVHVT--ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
H E + + D SK+ + DR ++ WD ++ R++ K GH +N V F+
Sbjct: 277 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 336
Query: 112 EYSSVVVSAGYDQSL 126
+++SA D+ L
Sbjct: 337 PDEPIIISASSDKRL 351
Score = 140 (54.3 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 47/208 (22%), Positives = 88/208 (42%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFN 111
I H EV + S L S G DR I W+V +GH V + +N
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 112 EYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170
S++ SA D+++ WD + + ++ SF +S + GS DGTV+
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 171 FDIRVGRELSDDLGQ-PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+DIR + V ++ ++ + I++ +D+ +++ D +L +GH
Sbjct: 179 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA--D 236
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T L++ +++ + D + WD+
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/273 (27%), Positives = 137/273 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GHEG V +F+ +G+ S G DR I LWN + + T K H V ++H D
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWD 130
S L S D+ + WD TG +++ +GH S VN+ +V G D +++ WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 131 CRSHSTEPIQIIDSFQDS--VMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP 186
R + I +FQ++ V++V T +II G +D ++ +D+R + G
Sbjct: 182 IRKKAA-----IQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA 236
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD-RSTG---ELLQEYKGHICKSFKTD---CCLT 237
V +S+S++G+ +L++ +D+T+R+ D R ++ ++G++ +F+ + C +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNV-HNFEKNLLRCSWS 295
Query: 238 NSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ + GS D ++Y WD ++ K H+
Sbjct: 296 PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 328
Score = 150 (57.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 1 MSVSDLPRTEAN-VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--P----HRGIHI 53
+ V DL + + ++GH +V + +G+Y LS D T+R+W+ P R + I
Sbjct: 218 IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRI 277
Query: 54 KTYKSHGREVRDVHVT--ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
H E + + D SK+ + DR ++ WD ++ R++ K GH +N V F+
Sbjct: 278 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 337
Query: 112 EYSSVVVSAGYDQSL 126
+++SA D+ L
Sbjct: 338 PDEPIILSASSDKRL 352
Score = 140 (54.3 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 47/208 (22%), Positives = 88/208 (42%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFN 111
I H EV + S L S G DR I W+V +GH V + +N
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 112 EYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170
S++ SA D+++ WD + + ++ SF +S + GS DGTV+
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 171 FDIRVGRELSDDLGQ-PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+DIR + V ++ ++ + I++ +D+ +++ D +L +GH
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA--D 237
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T L++ +++ + D + WD+
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/273 (27%), Positives = 137/273 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GHEG V +F+ +G+ S G DR I LWN + + T K H V ++H D
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWD 130
S L S D+ + WD TG +++ +GH S VN+ +V G D +++ WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 131 CRSHSTEPIQIIDSFQDS--VMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP 186
R + + +FQ++ V++V T +II G +D ++ +D+R + G
Sbjct: 182 IRKKAA-----VQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA 236
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD-RSTG---ELLQEYKGHICKSFKTD---CCLT 237
V +S+S++G+ +L++ +D+T+R+ D R ++ ++G++ +F+ + C +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWS 295
Query: 238 NSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ + GS D ++Y WD V+ K H+
Sbjct: 296 PDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHA 328
Score = 150 (57.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 1 MSVSDLPRTEAN-VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--P----HRGIHI 53
+ V DL + + ++GH +V + +G+Y LS D T+R+W+ P R + I
Sbjct: 218 IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 54 KTYKSHGREVRDVHVT--ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
H E + + D SK+ + DR ++ WD ++ RV+ K GH +N V F+
Sbjct: 278 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFH 337
Query: 112 EYSSVVVSAGYDQSL 126
+++SA D+ L
Sbjct: 338 PDEPIILSASSDKRL 352
Score = 139 (54.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 47/208 (22%), Positives = 88/208 (42%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFN 111
I H EV + S L S G DR I W+V +GH V + +N
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 112 EYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170
S++ SA D+++ WD + + ++ SF +S + GS DGTV+
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 171 FDIRVGRELSDDLGQ-PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+DIR + V ++ ++ + I++ +D+ +++ D +L +GH
Sbjct: 180 WDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA--D 237
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T L++ +++ + D + WD+
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/273 (27%), Positives = 137/273 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GHEG V +F+ +G+ S G DR I LWN + + T K H V ++H D
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWD 130
S L S D+ + WD TG +++ +GH S VN+ +V G D +++ WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 131 CRSHSTEPIQIIDSFQDS--VMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP 186
R + I +FQ++ V++V T +II G +D ++ +D+R + G
Sbjct: 182 IRKKAA-----IQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA 236
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD-RSTG---ELLQEYKGHICKSFKTD---CCLT 237
V +S+S++G+ +L++ +D+T+R+ D R ++ ++G++ +F+ + C +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWS 295
Query: 238 NSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ + GS D ++Y WD ++ K H+
Sbjct: 296 PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 328
Score = 149 (57.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 1 MSVSDLPRTEAN-VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--P----HRGIHI 53
+ V DL + + ++GH +V + +G+Y LS D T+R+W+ P R + I
Sbjct: 218 IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 54 KTYKSHGREVRDVHVT--ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
H E + + D SK+ + DR ++ WD ++ R++ K GH +N V F+
Sbjct: 278 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 337
Query: 112 EYSSVVVSAGYDQSL 126
+++SA D+ L
Sbjct: 338 PDEPIILSASSDKRL 352
Score = 140 (54.3 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 47/208 (22%), Positives = 88/208 (42%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFN 111
I H EV + S L S G DR I W+V +GH V + +N
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 112 EYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170
S++ SA D+++ WD + + ++ SF +S + GS DGTV+
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 171 FDIRVGRELSDDLGQ-PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+DIR + V ++ ++ + I++ +D+ +++ D +L +GH
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA--D 237
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T L++ +++ + D + WD+
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/273 (27%), Positives = 137/273 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GHEG V +F+ +G+ S G DR I LWN + + T K H V ++H D
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWD 130
S L S D+ + WD TG +++ +GH S VN+ +V G D +++ WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 131 CRSHSTEPIQIIDSFQDS--VMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP 186
R + I +FQ++ V++V T +II G +D ++ +D+R + G
Sbjct: 182 IRKKAA-----IQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA 236
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD-RSTG---ELLQEYKGHICKSFKTD---CCLT 237
V +S+S++G+ +L++ +D+T+R+ D R ++ ++G++ +F+ + C +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWS 295
Query: 238 NSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ + GS D ++Y WD ++ K H+
Sbjct: 296 PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 328
Score = 149 (57.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 1 MSVSDLPRTEAN-VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--P----HRGIHI 53
+ V DL + + ++GH +V + +G+Y LS D T+R+W+ P R + I
Sbjct: 218 IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 54 KTYKSHGREVRDVHVT--ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
H E + + D SK+ + DR ++ WD ++ R++ K GH +N V F+
Sbjct: 278 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 337
Query: 112 EYSSVVVSAGYDQSL 126
+++SA D+ L
Sbjct: 338 PDEPIILSASSDKRL 352
Score = 140 (54.3 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 47/208 (22%), Positives = 88/208 (42%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFN 111
I H EV + S L S G DR I W+V +GH V + +N
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 112 EYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170
S++ SA D+++ WD + + ++ SF +S + GS DGTV+
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 171 FDIRVGRELSDDLGQ-PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+DIR + V ++ ++ + I++ +D+ +++ D +L +GH
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA--D 237
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T L++ +++ + D + WD+
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 75/273 (27%), Positives = 137/273 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GHEG V +F+ +G+ S G DR I LWN + + T K H V ++H D
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 120
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWD 130
S L S D+ + WD TG +++ +GH S VN+ +V G D +++ WD
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 131 CRSHSTEPIQIIDSFQDS--VMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP 186
R + I +FQ++ V++V T +II G +D ++ +D+R + G
Sbjct: 181 IRKKAA-----IQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA 235
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD-RSTG---ELLQEYKGHICKSFKTD---CCLT 237
V +S+S++G+ +L++ +D+T+R+ D R ++ ++G++ +F+ + C +
Sbjct: 236 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWS 294
Query: 238 NSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ + GS D ++Y WD ++ K H+
Sbjct: 295 PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHA 327
Score = 140 (54.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 47/208 (22%), Positives = 88/208 (42%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFN 111
I H EV + S L S G DR I W+V +GH V + +N
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 112 EYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170
S++ SA D+++ WD + + ++ SF +S + GS DGTV+
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 171 FDIRVGRELSDDLGQ-PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+DIR + V ++ ++ + I++ +D+ +++ D +L +GH
Sbjct: 179 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA--D 236
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T L++ +++ + D + WD+
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 1 MSVSDLPRTEAN-VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--P----HRGIHI 53
+ V DL + + ++GH +V + +G+Y LS D T+R+W+ P R + I
Sbjct: 217 IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 276
Query: 54 KTYKSHGREVRDVHVT--ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
H E + + D SK+ + DR ++ WD ++ R++ K GH +N V F+
Sbjct: 277 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFH 336
Query: 112 EYSSVVVSAGY 122
++ G+
Sbjct: 337 P-DEPIIETGF 346
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 302 (111.4 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 84/277 (30%), Positives = 130/277 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L+GH V A RF+ D + S G D +++W G I T++ H + + + D
Sbjct: 171 LLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDG 230
Query: 73 SKLISCGGDRQIFYWDVSTGRVI-RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+ + S D+ I W+V TG+ F GH + V A+ F+ +++VS YD+++ WD
Sbjct: 231 ATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDV 290
Query: 132 RSHSTEPIQIIDSFQDSV--MSVCLTKTEIIGGSVDGTVRTFDIRVG---RELSDDLGQP 186
RS ++ + + D V + V T I + DG VR +D G R L + P
Sbjct: 291 RS--ARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPP 348
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCL---------- 236
V+ + S +G +LA LD +RL D G L+ Y+GH K +
Sbjct: 349 VSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGR 408
Query: 237 TNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
T A GSEDG I WD+V V+ + +AH VV
Sbjct: 409 TPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVV 445
Score = 156 (60.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 60/261 (22%), Positives = 99/261 (37%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-IHIKTYKSHGREVRDVHVTADNS 73
+GH + ++ DG S D+TIRLWN G H + H V + + +
Sbjct: 215 EGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGN 274
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D +F WDV + RV++ H V+ + +++ S D +R WD +
Sbjct: 275 MLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTST 334
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCIS 191
++ V SV + ++ ++D VR +D GR L G S
Sbjct: 335 GQCLRT-LVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYS 393
Query: 192 MSND----GNCI----------LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLT 237
+S G I ++ D + D T ++LQ + H D C T
Sbjct: 394 LSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCST 453
Query: 238 NSDAHVTGGSEDGYIYFWDLV 258
+ DG + W+ V
Sbjct: 454 GEGRFMVSCGLDGTVRVWEEV 474
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 75/273 (27%), Positives = 138/273 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GHEG V +F+ +G S G DR I +WN + + T K H V ++H D
Sbjct: 51 LLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTD 110
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWD 130
S L S D+ + WD TG +++ +GH S VN+ + G D +++ WD
Sbjct: 111 GSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWD 170
Query: 131 CRSHSTEPIQIIDSFQDS--VMSVCLTKT--EIIGGSVDGTVRTFDIRVGREL--SDDLG 184
R ++ + +FQ++ V+SV T +II G +D ++ +D+R + + G
Sbjct: 171 IRKKAS-----VHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHG 225
Query: 185 QPVNCISMSNDGNCILASCLDSTLRLLD-RSTG---ELLQEYKGHICKSFKTDC--CLTN 238
V +S+S DG+ +L++ +D+++R+ D R ++ ++G++ +F+ + C +
Sbjct: 226 DSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNV-HNFEKNLLRCSWS 284
Query: 239 SD-AHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+D + + GS D ++Y WD +V K H+
Sbjct: 285 ADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHA 317
Score = 224 (83.9 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 68/259 (26%), Positives = 115/259 (44%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
LKGH GAV+ +N DG+ S D+T+ +W+ G +K K H V A
Sbjct: 95 LKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCF-PARRG 153
Query: 74 KLISCGG--DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++C G D + WD+ + F+ + +V +V FN+ S ++S G D ++ WD
Sbjct: 154 PQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDL 212
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIR--VGRELSDDLGQP- 186
R + I + DSV + L+ + ++ S+D +VR +DIR +E + Q
Sbjct: 213 RQNKL--IYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGN 270
Query: 187 --------VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
+ C S S DG+ I A D + + D +T ++ + GH +
Sbjct: 271 VHNFEKNLLRC-SWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHA--GSVNEVAFHP 327
Query: 239 SDAHVTGGSEDGYIYFWDL 257
+ V GS D +Y ++
Sbjct: 328 EEPIVLSGSSDKRLYIGEI 346
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 47/208 (22%), Positives = 87/208 (41%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFN 111
I H EV + + L S G DR I W+V +GH V + +N
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYN 108
Query: 112 EYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170
S++ SA D+++ WD + + ++ SF +S GS DGTV+
Sbjct: 109 TDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKL 168
Query: 171 FDIRVGRELSDDLGQ-PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+DIR + V ++ ++ + I++ +D+ +++ D +L+ +GH
Sbjct: 169 WDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGH--GD 226
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T L+ +++ S D + WD+
Sbjct: 227 SVTGLSLSADGSYLLSNSMDNSVRVWDI 254
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 74/267 (27%), Positives = 128/267 (47%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
VL+GH G + ++F+ DG++ S G D+ I LWN + K H + +V AD
Sbjct: 31 VLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNAD 90
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYS-SVVVSAGYDQSLRAWD 130
+S L+S G D+ + WD+ TG IR F+ H VN+V N ++ SA D ++ D
Sbjct: 91 SSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHD 150
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG--RELSDDLGQPVN 188
RS + I +Q + ++ +I G +D ++ +D+ R + +
Sbjct: 151 MRSKEAAK-KFICKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTIT 209
Query: 189 CISMSNDGNCILASCLDSTLRLLD-RS---TGELLQEYKG--HICKSFKTDCCLTNSDAH 242
+S+S++GN +L++ +D +L D R L+ Y+G H + C + D +
Sbjct: 210 SLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNY 269
Query: 243 VTGGSEDGYIYFWDLVDASVVAKFKAH 269
+T GS D ++Y W+ + V K H
Sbjct: 270 ITAGSADRFVYVWNAKSRACVYKLPGH 296
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 75/269 (27%), Positives = 119/269 (44%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GH AV +FN G S DR I LW H + K H + D+H T+D
Sbjct: 48 LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSD 107
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAV-KFNEYSSVVVSAGYDQSLRAWD 130
S+++S D+ + WDV TG+ I+K H S VN+ +++S D + + WD
Sbjct: 108 GSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Query: 131 CRSHSTEPIQII-DSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
R IQ D +Q + +S +I G VD V+ +D+R G G +
Sbjct: 168 MRQRGA--IQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTI 225
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRST----GELLQEYKGHICKSFKT--DCCLTNSDA 241
+S+S DG+ +L + +D+ L + D ++ ++GH K C +
Sbjct: 226 TGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGT 285
Query: 242 HVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
VT GS D ++ WD + K H+
Sbjct: 286 KVTAGSSDRMVHIWDTTSRRTIYKLPGHT 314
Score = 157 (60.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 57/227 (25%), Positives = 99/227 (43%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG-RVI 95
GK+RT L P I H V + + + S DR+IF W V +
Sbjct: 35 GKNRTSSLEAP-----IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNF 89
Query: 96 RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT 155
+GH++ + + + S +VSA D+++RAWD + + I+ + V S C T
Sbjct: 90 MVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETG--KQIKKMAEHSSFVNSCCPT 147
Query: 156 KTE---IIGGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRL 210
+ II GS DGT + +D+R + D Q + +S S+ + I +D+ +++
Sbjct: 148 RRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKV 206
Query: 211 LDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
D GE +GH + T L+ +++ D + WD+
Sbjct: 207 WDLRKGEATMTLEGH--QDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 138 (53.6 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 34/135 (25%), Positives = 66/135 (48%)
Query: 1 MSVSDLPRTEANV-LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHRGIH--IKT 55
+ V DL + EA + L+GH+ + + DG+Y L+ G D + +W+ P+ + +K
Sbjct: 204 VKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKI 263
Query: 56 YKSHG----REVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
++ H + + + D +K+ + DR + WD ++ R I K GH VN F+
Sbjct: 264 FEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFH 323
Query: 112 EYSSVVVSAGYDQSL 126
++ S D+++
Sbjct: 324 PTEPIIGSCSSDKNI 338
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 73/274 (26%), Positives = 136/274 (49%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTAD 71
+L GHEG V +F+ +G+ S G DR I LW+ + + T K H V ++H D
Sbjct: 62 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTD 121
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWD 130
S L S D+ + WD TG +++ +GH S VN+ +V G D +++ WD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 131 CRSHSTEPIQIIDSFQDS--VMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP 186
R + I +FQ++ V++V T +II G +D ++ +D+R + G
Sbjct: 182 IRKKAA-----IQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA 236
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD-RSTG---ELLQEYKGHICKSFKTD---CCLT 237
V +S+S++G+ +L++ +D+T+R+ D R ++ ++G++ +F+ + C +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWS 295
Query: 238 NSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSL 271
+ + GS D ++Y W + + + H L
Sbjct: 296 PDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRL 329
Score = 139 (54.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 47/208 (22%), Positives = 87/208 (41%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFN 111
I H EV + S L S G DR I W V +GH V + +N
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYN 119
Query: 112 EYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170
S++ SA D+++ WD + + ++ SF +S + GS DGTV+
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 171 FDIRVGRELSDDLGQ-PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+DIR + V ++ ++ + I++ +D+ +++ D +L +GH
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHA--D 237
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T L++ +++ + D + WD+
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 293 (108.2 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 78/263 (29%), Positives = 126/263 (47%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+GH +V + F+ DG S D TI+LWN G +T+K H +R V + D
Sbjct: 956 LEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGK 1015
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L+S D I WD++T + + H V+AV F+ + S+ D +++ WD S
Sbjct: 1016 HLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD--S 1073
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDL-GQP--VN 188
+ E + ++ V SV + + S DGT++ ++ G EL L G+ V+
Sbjct: 1074 ATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG-ELQQTLTGRSDWVD 1132
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHV-TGGS 247
++ S DG + + DST++L D +TGELLQ +GH S + + + D + GS
Sbjct: 1133 SVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGH---SDRIQSVVFSPDGKLLASGS 1189
Query: 248 EDGYIYFWDLVDASVVAKFKAHS 270
D WD ++ F+ HS
Sbjct: 1190 YDQTAKLWDPATGELLQIFEGHS 1212
Score = 288 (106.4 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 74/263 (28%), Positives = 124/263 (47%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+G G V + F+ DG S + T++LWNP G ++T + H + VR V + D
Sbjct: 914 LEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGK 973
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+L S D I W+ +TG + + F+GH+ + AV F+ +VS D +++ WD +
Sbjct: 974 QLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLAT 1033
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDL---GQPVN 188
+ Q ++ SV +V + + + S+D T++ +D G EL L Q V
Sbjct: 1034 SELQ--QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATG-ELQRTLEGHSQGVR 1090
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA-HVTGGS 247
++ S DG + ++ D T++L + TGEL Q G +S D + D + G
Sbjct: 1091 SVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTG---RSDWVDSVAFSPDGKQLASGY 1147
Query: 248 EDGYIYFWDLVDASVVAKFKAHS 270
D I WD ++ + HS
Sbjct: 1148 YDSTIKLWDSATGELLQTLEGHS 1170
Score = 287 (106.1 bits), Expect = 8.3e-24, P = 8.3e-24
Identities = 72/261 (27%), Positives = 121/261 (46%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V + F+ DG S D TI LW+ G ++T++ H + V D
Sbjct: 788 LDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGK 847
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+L S D I WD++TG + + H V +V F+ ++ S+ D +++ W+ +
Sbjct: 848 ELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPAT 907
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLG--QPVNC 189
+ Q ++ V SV + ++ GS TV+ ++ G L G Q V
Sbjct: 908 GELQ--QSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRS 965
Query: 190 ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249
++ S DG + +S D+T++L + +TGEL Q +KGH + + H+ GS+D
Sbjct: 966 VAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGH--DLWIRAVAFSPDGKHLVSGSDD 1023
Query: 250 GYIYFWDLVDASVVAKFKAHS 270
I WDL + + + HS
Sbjct: 1024 NTIKLWDLATSELQQSLEDHS 1044
Score = 281 (104.0 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 74/270 (27%), Positives = 126/270 (46%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
E L+ H G V + F+ DG +S D T+++W+P G ++T H V + +
Sbjct: 742 EQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFS 801
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
D L S D I WD +TG +++ F GH + +V F + SA D +++ W
Sbjct: 802 PDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIW 861
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDL-GQP 186
D + + Q +DS SV SV + + S+D T++ ++ G EL L G+
Sbjct: 862 DLATGELQ--QTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATG-ELQQSLEGRS 918
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
V ++ S DG + + +T++L + +TGELLQ +GH +S ++ + +
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGH-SQSVRS-VAFSPDGKQLA 976
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVVK 274
S D I W+ + FK H L ++
Sbjct: 977 SSSSDTTIKLWNSTTGELQQTFKGHDLWIR 1006
Score = 247 (92.0 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 71/229 (31%), Positives = 109/229 (47%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
+ +L RT L+GH V + F+ DG S D TI+LWNP G +T
Sbjct: 1074 ATGELQRT----LEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSD 1129
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
V V + D +L S D I WD +TG +++ GH + +V F+ ++ S
Sbjct: 1130 WVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGS 1189
Query: 122 YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-EIIGGSVDG-TVRTFDIRVGREL 179
YDQ+ + WD + E +QI + V SV + +++ S G T++ +D G EL
Sbjct: 1190 YDQTAKLWD--PATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTG-EL 1246
Query: 180 SDDLGQP---VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
L P ++ S DGN + + + T ++ D +TGELLQ KGH
Sbjct: 1247 LQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIWDPATGELLQALKGH 1294
Score = 226 (84.6 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 66/265 (24%), Positives = 115/265 (43%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSK 74
+GH ++ + F DG S D TI++W+ G +T SH + VR V + D
Sbjct: 831 EGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKL 890
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L S D I W+ +TG + + G V +V F+ + S +++ W+
Sbjct: 891 LASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN--PA 948
Query: 135 STEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDL-GQP--VNC 189
+ E +Q ++ SV SV + ++ S D T++ ++ G EL G +
Sbjct: 949 TGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG-ELQQTFKGHDLWIRA 1007
Query: 190 ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249
++ S DG +++ D+T++L D +T EL Q + H +S + D + S D
Sbjct: 1008 VAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDH-SRSVHA-VAFSPDDKQLASSSLD 1065
Query: 250 GYIYFWDLVDASVVAKFKAHSLVVK 274
I WD + + HS V+
Sbjct: 1066 STIKLWDSATGELQRTLEGHSQGVR 1090
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 281 (104.0 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 73/255 (28%), Positives = 125/255 (49%)
Query: 7 PRTEANVLKGHEGAVLAARFN-GDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
P T V+ GH G V G+ +C G DRTI++W+ G+ T H VR
Sbjct: 152 PWTLMRVISGHLGWVRCVDVEPGNQWFCTGAG-DRTIKIWDLASGVLKLTLTGHIATVRG 210
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
+ V+ + L SCG D+ + WD+ T +VIR + GH S V A+K + V+V+AG D
Sbjct: 211 LAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAV 270
Query: 126 LRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELSD-- 181
R WD R+ + ++ + +V S+ + + +++ GS+D T+R +D+ G+ L+
Sbjct: 271 ARVWDMRTRQN--VHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLT 328
Query: 182 DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA 241
+ V +S+ D AS ++ G + ++GH + + NSD
Sbjct: 329 HHKKTVRALSLHPD-EFTFASGSSDNIKHWKFPEGAFMGNFEGH---NAIVNTLSINSDN 384
Query: 242 HVTGGSEDGYIYFWD 256
+ G+++G + FWD
Sbjct: 385 VMFSGADNGSMCFWD 399
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 277 (102.6 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 67/253 (26%), Positives = 108/253 (42%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P+ A GH + F G+ S +D+T+RLW P +K+H VR V
Sbjct: 49 PKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSV 108
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
H + D +L++ D+ + W V + + H + V +F+ ++ S G D+++
Sbjct: 109 HFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTV 168
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELSDDL- 183
R WD SH I I + S V T I D T++ +DIR + +
Sbjct: 169 RLWDTSSHQC--INIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKV 226
Query: 184 -GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
VNC S GN +++ DST+++LD G L+ GH T + D
Sbjct: 227 HNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVL-TVTFSRDGDLF 285
Query: 243 VTGGSEDGYIYFW 255
+GG+ D + W
Sbjct: 286 ASGGA-DSQVLMW 297
Score = 187 (70.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 64/274 (23%), Positives = 117/274 (42%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGK-DRTIRLWNPHRGIHIKTYKSHG 60
SV + P E + KGH+ + A FN + N L+ G D+++ +WN + H
Sbjct: 3 SVMEDPTLERH-FKGHKDVISCADFNPN-NKQLATGSCDKSLMIWNLAPKARAFRFVGHT 60
Query: 61 REVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSA 120
+ V+ S + S D+ + W S F+ H + V +V F+ +V+A
Sbjct: 61 DVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTA 120
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSV--DGTVRTFDIRVGR- 177
D+S++ W + ++ + V + + S D TVR +D +
Sbjct: 121 SDDKSVKVWGVERKKF--LYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQC 178
Query: 178 -ELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCL 236
+ D G + ++ G CI +S D+T+++ D T +L+Q YK H + +C
Sbjct: 179 INIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVH---NAGVNCFS 235
Query: 237 TN-SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
+ S ++ GS D I DL++ ++ H
Sbjct: 236 FHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGH 269
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 56/228 (24%), Positives = 102/228 (44%)
Query: 55 TYKSHGREVRDVHVTAD---NSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
T + H + +DV AD N+K ++ G D+ + W+++ +F GH + V F
Sbjct: 9 TLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNF 68
Query: 111 NEYSSVVVSAGYDQSLRAW--DCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDG 166
S+V S+ DQ++R W + ST + + SV SV ++ ++ S D
Sbjct: 69 APSGSLVASSSRDQTVRLWTPSIKGEST----VFKAHTASVRSVHFSRDGQRLVTASDDK 124
Query: 167 TVRTFDIRVGRELSDDLGQPVN---CISMSNDGNCILASCLDS-TLRLLDRSTGELLQEY 222
+V+ + + + L L + N C S DG ++ASC D T+RL D S+ + + +
Sbjct: 125 SVKVWGVERKKFLYS-LNRHTNWVRCARFSPDGR-LIASCGDDRTVRLWDTSSHQCINIF 182
Query: 223 KGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ + D +S + D I WD+ ++ +K H+
Sbjct: 183 TDYGGSATFVD--FNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHN 228
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 274 (101.5 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 74/256 (28%), Positives = 115/256 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P A GH+ V + +F+ GN S +DRT+RLW P + +K+H VR V
Sbjct: 7 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV 66
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+AD L + D+ I W + R + H V KF+ ++VS D+++
Sbjct: 67 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 126
Query: 127 RAWDCRSHSTEPIQIIDSFQDSV-----MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
+ WD T Q +++F DSV + + T I D TV+ +D+RV + L
Sbjct: 127 KIWD-----TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQH 181
Query: 182 DLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
VNCIS GN ++ + D TL++LD G L+ +GH F T
Sbjct: 182 YQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF-TVSFSKGG 240
Query: 240 DAHVTGGSEDGYIYFW 255
+ +GG+ D + W
Sbjct: 241 ELFASGGA-DTQVLLW 255
Score = 210 (79.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
R + + K H V + F+ DG + + +D++I++W+ +R + + H VR
Sbjct: 50 RGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAK 109
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+ D ++SC D+ I WD + + + F N V FN + + SAG DQ+++
Sbjct: 110 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 169
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ-- 185
WD R + + S + +S + +I S DGT++ D+ GR + G
Sbjct: 170 VWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 229
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218
PV +S S G + D+ + L + EL
Sbjct: 230 PVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 262
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 53/237 (22%), Positives = 98/237 (41%)
Query: 44 LWN--PHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGH 101
LWN PH + Y H V V + + L S DR + W +F+ H
Sbjct: 2 LWNFKPHARAY--RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAH 59
Query: 102 ESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--- 158
+ V +V F+ + +A D+S++ W + ++ + C +
Sbjct: 60 TAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRF----LYSLYRHTHWVRCAKFSPDGR 115
Query: 159 -IIGGSVDGTVRTFDI---RVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRS 214
I+ S D T++ +D + SD +G N + + G CI ++ D T+++ D
Sbjct: 116 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVR 174
Query: 215 TGELLQEYKGHICKSFKTDCCLTN-SDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+LLQ Y+ H S +C + S ++ S DG + DL++ ++ + H+
Sbjct: 175 VNKLLQHYQVH---SGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHT 228
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 274 (101.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 74/256 (28%), Positives = 115/256 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P A GH+ V + +F+ GN S +DRT+RLW P + +K+H VR V
Sbjct: 49 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV 108
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+AD L + D+ I W + R + H V KF+ ++VS D+++
Sbjct: 109 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 127 RAWDCRSHSTEPIQIIDSFQDSV-----MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
+ WD T Q +++F DSV + + T I D TV+ +D+RV + L
Sbjct: 169 KIWD-----TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQH 223
Query: 182 DLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
VNCIS GN ++ + D TL++LD G L+ +GH F T
Sbjct: 224 YQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF-TVSFSKGG 282
Query: 240 DAHVTGGSEDGYIYFW 255
+ +GG+ D + W
Sbjct: 283 ELFASGGA-DTQVLLW 297
Score = 210 (79.0 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
R + + K H V + F+ DG + + +D++I++W+ +R + + H VR
Sbjct: 92 RGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAK 151
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+ D ++SC D+ I WD + + + F N V FN + + SAG DQ+++
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 211
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ-- 185
WD R + + S + +S + +I S DGT++ D+ GR + G
Sbjct: 212 VWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 271
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218
PV +S S G + D+ + L + EL
Sbjct: 272 PVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
Score = 177 (67.4 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 62/279 (22%), Positives = 116/279 (41%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHRGIHIKTYKSH 59
S ++ P E KGH+ A+ + + +G + D + LWN PH + Y H
Sbjct: 3 SATEDPVLE-RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAY--RYVGH 59
Query: 60 GREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVS 119
V V + + L S DR + W +F+ H + V +V F+ + +
Sbjct: 60 KDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLAT 119
Query: 120 AGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDI-- 173
A D+S++ W + ++ + C + I+ S D T++ +D
Sbjct: 120 ASEDKSIKVWSMYRQRF----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 174 -RVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKT 232
+ SD +G N + + G CI ++ D T+++ D +LLQ Y+ H S
Sbjct: 176 KQCVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH---SGGV 231
Query: 233 DCCLTN-SDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+C + S ++ S DG + DL++ ++ + H+
Sbjct: 232 NCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHT 270
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 267 (99.0 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 73/267 (27%), Positives = 119/267 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P++ A GH+ AV F+ G+ S +D+T+R+W P+ +++H VR V
Sbjct: 50 PQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSV 109
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
H +D L++ D+ + W + + H + V +F+ ++VSA D+++
Sbjct: 110 HFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTV 169
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSD-DL 183
+ WD S E + V V + T I S+D TV+ +D+R R L L
Sbjct: 170 KLWD--KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQL 227
Query: 184 -GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
VN +S GN +L + DSTL++LD G LL GH + T + + +
Sbjct: 228 HSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGH--QGPATTVAFSRTGEY 285
Query: 243 VTGGSEDGYIYFW----DLVDASVVAK 265
G D + W D+VD V K
Sbjct: 286 FASGGSDEQVMVWKSNFDVVDYREVIK 312
Score = 165 (63.1 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 54/228 (23%), Positives = 96/228 (42%)
Query: 56 YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115
+K H + V + + +L S D + W + +F GH+ V V F+
Sbjct: 15 FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGH 74
Query: 116 VVVSAGYDQSLRAW--DCRSHSTEPIQIIDSFQDSVMSV--CLTKTEIIGGSVDGTVRTF 171
++ S D+++R W + + ST + + +V SV C ++ S D TV+ +
Sbjct: 75 LLASGSRDKTVRIWIPNVKGEST----VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 172 DIRVGRELSDDLGQPVN---CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228
+ L L Q +N C S DG I+++ D T++L D+++ E + Y H
Sbjct: 131 STHRQKFLFS-LSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH--G 187
Query: 229 SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
F T S + S D + WD+ ++ ++ HS V L
Sbjct: 188 GFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Score = 150 (57.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 61/271 (22%), Positives = 107/271 (39%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P E + KGH A+ + F+ + S D + +W+ + H V V
Sbjct: 9 PSLERH-FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCV 67
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+ + L S D+ + W + FR H + V +V F +V+A D+++
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSV-CLTKTE----IIGGSVDGTVRTFDIRVGRELSD 181
+ W ST + + S + V C + I+ S D TV+ +D + RE
Sbjct: 128 KVW-----STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-KTSRECVH 181
Query: 182 DL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
G V + G CI A+ +D+T+++ D T LLQ Y+ H +
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLH--SAAVNALSFHP 239
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
S ++ S D + DL++ ++ H
Sbjct: 240 SGNYLLTASSDSTLKILDLMEGRLLYTLHGH 270
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 269 (99.8 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 73/256 (28%), Positives = 113/256 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P+ A GH+ + + +F+ GN S +DRTIRLW P + +K+H VR V
Sbjct: 49 PQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSV 108
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+AD L S D+ I W++ R + H V KF+ ++VS D+++
Sbjct: 109 DFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 127 RAWDCRSHSTEPIQIIDSFQDSV-----MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
+ WD T Q +++F D V ++ T I D TV+ +DIRV + L
Sbjct: 169 KIWD-----TTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQH 223
Query: 182 DLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
VNC+S GN ++ + D TL++LD G L+ +GH F +
Sbjct: 224 YQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS--FSKG 281
Query: 240 DAHVTGGSEDGYIYFW 255
T G D + W
Sbjct: 282 GELFTSGGADAQVLLW 297
Score = 216 (81.1 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 57/218 (26%), Positives = 98/218 (44%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
R +++ K H V + F+ DG + S +D++I++WN +R + + H VR
Sbjct: 92 RGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAK 151
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+ D ++SC D+ I WD + + + F N V FN + + SAG D +++
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVK 211
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ-- 185
WD R + + S + +S + +I S DGT++ D+ GR + G
Sbjct: 212 IWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 271
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223
PV +S S G + D+ + L + EL YK
Sbjct: 272 PVFTVSFSKGGELFTSGGADAQVLLWRTNFDEL--NYK 307
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 58/264 (21%), Positives = 112/264 (42%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSK 74
KGH+ A+ + F+ +G + D + LW+ Y H + V + +
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNL 74
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L S DR I W +F+ H + V +V F+ + SA D+S++ W+
Sbjct: 75 LASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQ 134
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDI---RVGRELSDDLGQPV 187
+ ++ + C + I+ S D T++ +D + SD +G
Sbjct: 135 RF----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGF-A 189
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN-SDAHVTGG 246
N ++ + +G CI ++ D T+++ D +LLQ Y+ H S +C + S ++
Sbjct: 190 NFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH---SGGVNCVSFHPSGNYLITA 246
Query: 247 SEDGYIYFWDLVDASVVAKFKAHS 270
S DG + DL++ ++ + H+
Sbjct: 247 SSDGTLKILDLLEGRLIYTLQGHT 270
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 42/235 (17%), Positives = 95/235 (40%)
Query: 46 NPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEV 105
+P + + +K H + V + + +L + D + W + ++ GH+ +
Sbjct: 4 SPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVI 63
Query: 106 NAVKFNEYSSVVVSAGYDQSLRAW--DCRSHSTE------PIQIIDSFQDSVMSVCLTKT 157
+V+F+ +++ SA D+++R W D R S+E P++ +D D
Sbjct: 64 TSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQF------- 116
Query: 158 EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRST 215
+ S D +++ +++ R L V C S DG I++ D T+++ D +
Sbjct: 117 -LASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 216 GELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ + + + F + + D + WD+ ++ ++ HS
Sbjct: 176 KQCVNNFSDFV--GFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHS 228
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 75/256 (29%), Positives = 116/256 (45%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P+ A GH+ V + +F+ GN S +DRT+RLW P + +K+H VR V
Sbjct: 49 PQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSV 108
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+AD L + D+ I W++ R + H V KF+ ++VS D+++
Sbjct: 109 DFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 127 RAWDCRSHSTEPIQIIDSFQDSV-----MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
+ WD T Q +++F DSV + T I D TV+ +DIRV + L
Sbjct: 169 KIWD-----TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQH 223
Query: 182 DLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
VNC+S GN I+ + D TL++LD G L+ +GH F T
Sbjct: 224 YQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVF-TVSFSKGG 282
Query: 240 DAHVTGGSEDGYIYFW 255
+ +GG+ D + W
Sbjct: 283 ELFSSGGA-DTQVLLW 297
Score = 212 (79.7 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 56/214 (26%), Positives = 98/214 (45%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
R +++ K H V + F+ DG + + +D++I++WN +R + + H VR
Sbjct: 92 RGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAK 151
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+ D ++SC D+ I WD + + + F N V FN + + SAG D +++
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVK 211
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ-- 185
WD R + + S + +S + II S DGT++ D+ GR + G
Sbjct: 212 IWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTG 271
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
PV +S S G + D+ + LL R+ + L
Sbjct: 272 PVFTVSFSKGGELFSSGGADTQV-LLWRTNFDYL 304
Score = 178 (67.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 63/277 (22%), Positives = 115/277 (41%)
Query: 6 LPRTEANVL----KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
LP E VL KGH+ A+ + F+ G + D + LWN Y H
Sbjct: 2 LPFQEDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKD 61
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
V V + + L S DR + W +F+ H + V +V F+ + +A
Sbjct: 62 VVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATAS 121
Query: 122 YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDI---R 174
D+S++ W+ + ++ + C + I+ S D T++ +D +
Sbjct: 122 EDKSIKVWNMYRQRF----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 175 VGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDC 234
SD +G N + + +G CI ++ D T+++ D +LLQ Y+ H S +C
Sbjct: 178 CVNNFSDSVGF-ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH---SGGVNC 233
Query: 235 CLTN-SDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ S ++ S DG + DL++ ++ + H+
Sbjct: 234 VSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHT 270
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 266 (98.7 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 73/256 (28%), Positives = 114/256 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P A GH+ V + +F+ GN S +DRT+RLW P + +K+H VR V
Sbjct: 49 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV 108
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+AD L + D+ I W + R + H V KF+ ++VS D+++
Sbjct: 109 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 127 RAWDCRSHSTEPIQIIDSFQDSV-----MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
+ WD T Q +++F DSV + + T I D TV+ +D+RV + L
Sbjct: 169 KIWD-----TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQH 223
Query: 182 DLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
VNCIS N ++ + D TL++LD G L+ +GH F T
Sbjct: 224 YQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVF-TVSFSKGG 282
Query: 240 DAHVTGGSEDGYIYFW 255
+ +GG+ D + W
Sbjct: 283 ELFASGGA-DTQVLLW 297
Score = 210 (79.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 53/213 (24%), Positives = 96/213 (45%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
R + + K H V + F+ DG + + +D++I++W+ +R + + H VR
Sbjct: 92 RGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAK 151
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+ D ++SC D+ I WD + + + F N V FN + + SAG DQ+++
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVK 211
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ-- 185
WD R + + S + +S + ++ S DGT++ D+ GR + G
Sbjct: 212 VWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTG 271
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218
PV +S S G + D+ + L + EL
Sbjct: 272 PVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
Score = 185 (70.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 63/279 (22%), Positives = 117/279 (41%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHRGIHIKTYKSH 59
S ++ P E KGH+ A+ + + +G + D + LWN PH + Y H
Sbjct: 3 SATEDPVLE-RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAY--RYVGH 59
Query: 60 GREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVS 119
V V + + L S DR + W +F+ H + V +V F+ + +
Sbjct: 60 KDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLAT 119
Query: 120 AGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDI-- 173
A D+S++ W + ++ + C + I+ S D T++ +D
Sbjct: 120 ASEDKSIKVWSMYRQRF----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 174 -RVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKT 232
+ SD +G N + + G CI ++ D T+++ D +LLQ Y+ H S
Sbjct: 176 KQCVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH---SGGV 231
Query: 233 DCCLTN-SDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+C + SD ++ S DG + DL++ ++ + H+
Sbjct: 232 NCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHT 270
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 263 (97.6 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 83/277 (29%), Positives = 127/277 (45%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPH-RGIHIKTYKSHGREVRD 65
P++ A GH+ AV +F+ + S +D+T+RLW P +G + +++H VR
Sbjct: 49 PQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVRS 107
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
V +AD L++ D+ I W V ++I R H + V +F+ ++VS D++
Sbjct: 108 VCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRT 167
Query: 126 LRAWDCRSHSTEPIQIIDSFQD-----SVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELS 180
++ WD S Q+I +F + S + + T I S D TVR +DIR L
Sbjct: 168 VKLWDASSR-----QLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQ 222
Query: 181 DDL--GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH----ICKSFKTDC 234
VN +S GN +L + DSTL++LD G LL GH C SF
Sbjct: 223 HYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSR-- 280
Query: 235 CLTNSDAHVTGGSEDGYIYFW----DLVDASVVAKFK 267
+ D + GS D + W D VD S V + K
Sbjct: 281 ---SGDQFASAGS-DQQVMVWRTNFDSVDYSRVLQQK 313
Score = 169 (64.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 64/273 (23%), Positives = 105/273 (38%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S D P E N KGH A+ + F+ G S D ++ +WN + H
Sbjct: 3 SALDDPTLERN-FKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKD 61
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
V V + L S D+ + W S FR H V +V F+ +++A
Sbjct: 62 AVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTAS 121
Query: 122 YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGREL 179
DQS++ W H + I + + V + ++ S D TV+ +D R+L
Sbjct: 122 DDQSIKLWSV--HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS-SRQL 178
Query: 180 SDDLGQP---VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCL 236
+P + + CI + D+T+R+ D T LLQ Y+ H +
Sbjct: 179 IHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVH--SAAVNALSF 236
Query: 237 TNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
S H+ S D + DL++ ++ H
Sbjct: 237 HPSGNHLLTASSDSTLKILDLLEGRLLYTLHGH 269
Score = 152 (58.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/229 (19%), Positives = 100/229 (43%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
+ +K H + + + ++ S D + W++ +F GH+ V V+F+
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTF 171
+ ++ S+ D+++R W S E + + + SV SVC + ++ S D +++ +
Sbjct: 72 AHLLASSSRDKTVRLW-VPSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 172 DIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK- 228
+ + + + V C S DG +++ D T++L D S+ +L+ + C+
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTF----CEP 185
Query: 229 -SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
+ + S + S D + WD+ +++ ++ HS V L
Sbjct: 186 GGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNAL 234
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 25/116 (21%), Positives = 50/116 (43%)
Query: 33 CLS-CGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST 91
C++ D T+R+W+ ++ Y+ H V + + L++ D + D+
Sbjct: 200 CIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLE 259
Query: 92 GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD 147
GR++ GH+ + V F+ SAG DQ + W S + +++ +D
Sbjct: 260 GRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYSRVLQQKRD 315
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 262 (97.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 72/261 (27%), Positives = 115/261 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P++ A GH+ AV F+ G+ S +D+T+R+W P+ +++H VR V
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
H +D L++ D+ + W R + H + V KF+ ++VSA D+++
Sbjct: 110 HFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSD-DL 183
+ WD S E I V V + T I +D TV+ +D R R L L
Sbjct: 170 KLWD--KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQL 227
Query: 184 -GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
VN +S GN ++ + DSTL++LD G LL GH + T + + +
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH--QGPATTVAFSRTGEY 285
Query: 243 VTGGSEDGYIYFW----DLVD 259
G D + W D+VD
Sbjct: 286 FASGGSDEQVMVWKSNFDIVD 306
Score = 161 (61.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 63/271 (23%), Positives = 107/271 (39%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P E + KGH AV F+ + + S D T+ +W+ + H V V
Sbjct: 9 PSLERH-FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+ + L S D+ + W + FR H + V +V F +V+A D+++
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTV 127
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-----IIGGSVDGTVRTFDIRVGRELSD 181
+ W ST + + S + V K I+ S D TV+ +D + RE
Sbjct: 128 KVW-----STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECIH 181
Query: 182 DL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
G V + G CI A+ +D+T+++ D T LLQ Y+ H +
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLH--SAAVNALSFHP 239
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
S ++ S D + DL++ ++ H
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 55/228 (24%), Positives = 93/228 (40%)
Query: 56 YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115
+K H V V + + L S D + W + +F GH+ V V F+
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 116 VVVSAGYDQSLRAW--DCRSHSTEPIQIIDSFQDSVMSV--CLTKTEIIGGSVDGTVRTF 171
++ S D+++R W + + ST + + +V SV C ++ S D TV+ +
Sbjct: 75 LLASGSRDKTVRIWVPNVKGEST----VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 172 DIRVGRELSDDLGQPVN---CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228
R L L Q +N C S DG I+++ D T++L D+++ E + Y H
Sbjct: 131 STHRQRFLFS-LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEH--G 187
Query: 229 SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
F T S + D + WD ++ ++ HS V L
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNAL 235
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 262 (97.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 71/267 (26%), Positives = 117/267 (43%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P+T A GH+ AV F+ G+ S +D+T+R+W P+ +++H VR V
Sbjct: 50 PQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
H +D ++ D+ + W + + H + V KF+ ++VSA D+++
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSD-DL 183
+ WD S E + V V + T I +D TV+ +D+R R L L
Sbjct: 170 KLWD--KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL 227
Query: 184 -GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
VN +S GN ++ + DSTL++LD G LL GH + T + + +
Sbjct: 228 HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGH--QGPATTVAFSRTGEY 285
Query: 243 VTGGSEDGYIYFW----DLVDASVVAK 265
G D + W D+VD V +
Sbjct: 286 FASGGSDEQVMVWKSNFDIVDYGEVLR 312
Score = 161 (61.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 54/228 (23%), Positives = 94/228 (41%)
Query: 56 YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115
+K H V V + + +L S D + W + +F GH+ V V F+
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGH 74
Query: 116 VVVSAGYDQSLRAW--DCRSHSTEPIQIIDSFQDSVMSV--CLTKTEIIGGSVDGTVRTF 171
++ S D+++R W + + ST + + +V SV C + S D TV+ +
Sbjct: 75 LLASGSRDKTVRIWVPNVKGEST----VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 172 DIRVGRELSDDLGQPVN---CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228
+ L L Q +N C S DG I+++ D T++L D+++ E + Y H
Sbjct: 131 STHRQKFLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH--G 187
Query: 229 SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
F T S + D + WD+ ++ ++ HS V L
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 62/271 (22%), Positives = 105/271 (38%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P E + KGH AV + F+ + S D + +W+ + H V V
Sbjct: 9 PSLERH-FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCV 67
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+ + L S D+ + W + FR H + V +V F V+A D+++
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-----IIGGSVDGTVRTFDIRVGRELSD 181
+ W ST + + S + V K I+ S D TV+ +D + RE
Sbjct: 128 KVW-----STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVH 181
Query: 182 DL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
G V + G CI A+ +D+T+++ D T LLQ Y+ H +
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH--SAAVNALSFHP 239
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
S ++ S D + DL++ ++ H
Sbjct: 240 SGNYLVTASSDSTLKILDLMEGRLLYTLHGH 270
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 262 (97.3 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 62/249 (24%), Positives = 108/249 (43%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ +GH ++ FN + D T +LW+ G + T + H E+ +
Sbjct: 171 HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTS 230
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++I+ D + WD TGR + GH +E+++ FN S++++ D++ + WD
Sbjct: 231 GDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDA 290
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKT-EIIG-GSVDGTVRTFDIRVGR---ELSDDLGQP 186
+ + + D ++ C T ++I S DGT R F + +L G+
Sbjct: 291 TNGKC--VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGE- 347
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
++ IS + GN +L D T R+ D TG+ LQ +GH + F C V G
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFS--CAFNYKGNIVITG 405
Query: 247 SEDGYIYFW 255
S+D W
Sbjct: 406 SKDNTCRIW 414
Score = 243 (90.6 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 67/262 (25%), Positives = 113/262 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VLK H + N G+ ++ DRT +LW+ G + T + H V +
Sbjct: 87 VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPY 146
Query: 73 SKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
I+ G D+ W V TG+ FRGH +E+ + FN S++V + D + + WD
Sbjct: 147 GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQPVNC 189
++ E + + ++S+ + II GS D TV +D GR+++ +G
Sbjct: 207 QNG--EEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEI 264
Query: 190 ISMSNDGNC--ILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
S S + +C IL +D T +L D + G+ + GH + D C + + S
Sbjct: 265 SSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEIL--DSCFDYTGKLIATAS 322
Query: 248 EDGYIYFWDLVDASVVAKFKAH 269
DG + +AK + H
Sbjct: 323 ADGTARIFSAATRKCIAKLEGH 344
Score = 218 (81.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/265 (23%), Positives = 110/265 (41%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGK-DRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
E N L+GH V A FN ++ G D+T +LW+ G T++ H E+ +
Sbjct: 126 ELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF 185
Query: 69 TADNSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
S L++ G D WD+ G + RGH +E+ ++ FN +++ +D ++
Sbjct: 186 NPQ-STLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVV 244
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPV 187
WD + I I + S S + I+ GS+D T + +D G+ ++ G
Sbjct: 245 VWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDD 304
Query: 188 NCISMSND--GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
+ D G I + D T R+ +T + + + +GH + K H+
Sbjct: 305 EILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKIS--FNPQGNHLLT 362
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHS 270
GS D WD + + H+
Sbjct: 363 GSSDKTARIWDAQTGQCLQVLEGHT 387
Score = 191 (72.3 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 61/228 (26%), Positives = 96/228 (42%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNE- 112
K K+H + +V + S I+ DR WD ++G + GH + V A+ FN
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145
Query: 113 YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMS-VCLT----KTEIIGGSVDGT 167
Y + + +D++ + W S E + +F+ VCL+ T + GS+D T
Sbjct: 146 YGDKIATGSFDKTCKLW-----SVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTT 200
Query: 168 VRTFDIRVGRELSDDLGQPVNCISMS--NDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
+ +DI+ G E+ G IS+S G+ I+ D T+ + D TG + GH
Sbjct: 201 AKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGH 260
Query: 226 ICK----SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
+ SF DC L + GS D WD + VA H
Sbjct: 261 CAEISSASFNWDCSL------ILTGSMDKTCKLWDATNGKCVATLTGH 302
Score = 182 (69.1 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 43/162 (26%), Positives = 75/162 (46%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
+ N+L GH + +A FN D + L+ D+T +LW+ G + T H E+ D
Sbjct: 253 KVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFD 312
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+ + D + +T + I K GHE E++ + FN + +++ D++ R W
Sbjct: 313 YTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIW 372
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLT-KTEI-IGGSVDGTVR 169
D ++ +Q+++ D + S K I I GS D T R
Sbjct: 373 DAQTGQC--LQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCR 412
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 36/168 (21%), Positives = 71/168 (42%)
Query: 94 VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVC 153
+ + + H + V N+ S ++ YD++ + WD + S E + ++ ++ V ++
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWD--TASGEELNTLEGHRNVVYAIA 141
Query: 154 LTKT---EIIGGSVDGTVRTFDIRVGRELSDDLGQPVN--CISMSNDGNCILASCLDSTL 208
+I GS D T + + + G+ G C+S + + +D+T
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 209 RLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
+L D GE + +GH + T+ D +TG S D + WD
Sbjct: 202 KLWDIQNGEEVYTLRGHSAEIISLSFN-TSGDRIITG-SFDHTVVVWD 247
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 72/267 (26%), Positives = 119/267 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P++ A GH+ AV F+ G+ S +D+T+R+W P+ +++H VR V
Sbjct: 12 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 71
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
H +D ++ D+ + W + + H + V KF+ ++VSA D+++
Sbjct: 72 HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 131
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSD-DL 183
+ WD +S S E + V V + T I +D TV+ +D+R R L L
Sbjct: 132 KLWD-KS-SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL 189
Query: 184 -GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
VN +S GN ++ + DSTL++LD G LL GH + T + + +
Sbjct: 190 HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH--QGPATTVAFSRTGEY 247
Query: 243 VTGGSEDGYIYFW----DLVDASVVAK 265
G D + W D+VD V K
Sbjct: 248 FASGGSDEQVMVWKSNFDIVDHGEVTK 274
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 52/232 (22%), Positives = 100/232 (43%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
E+ V + H V + F DG ++ D+T+++W HR + + H VR +
Sbjct: 57 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFS 116
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
D ++S D+ + WD S+ + + H V V F+ + + +AG D +++ W
Sbjct: 117 PDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 176
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ--PV 187
D R+H + S + +S + +I S D T++ D+ GR L G P
Sbjct: 177 DVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 236
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
++ S G + D + ++ +S +++ G + K + L +S
Sbjct: 237 TTVAFSRTGEYFASGGSDEQV-MVWKSNFDIVDH--GEVTKVPRPPATLASS 285
Score = 140 (54.3 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 48/200 (24%), Positives = 83/200 (41%)
Query: 81 DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--DCRSHSTEP 138
D + W + +F GH+ V V F+ ++ S D+++R W + + ST
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-- 59
Query: 139 IQIIDSFQDSVMSV--CLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVN---CISMS 193
+ + +V SV C + S D TV+ + + L L Q +N C S
Sbjct: 60 --VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFS-LSQHINWVRCAKFS 116
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253
DG I+++ D T++L D+S+ E + Y H F T S + D +
Sbjct: 117 PDGRLIVSASDDKTVKLWDKSSRECVHSYCEH--GGFVTYVDFHPSGTCIAAAGMDNTVK 174
Query: 254 FWDLVDASVVAKFKAHSLVV 273
WD+ ++ ++ HS V
Sbjct: 175 VWDVRTHRLLQHYQLHSAAV 194
Score = 121 (47.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 52/239 (21%), Positives = 92/239 (38%)
Query: 39 DRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF 98
D + +W+ + H V V+ + L S D+ + W + F
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 99 RGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE 158
R H + V +V F V+A D++++ W +T + + S + V K
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVW-----ATHRQKFLFSLSQHINWVRCAKFS 116
Query: 159 -----IIGGSVDGTVRTFDIRVGRELSDDL---GQPVNCISMSNDGNCILASCLDSTLRL 210
I+ S D TV+ +D + RE G V + G CI A+ +D+T+++
Sbjct: 117 PDGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 175
Query: 211 LDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
D T LLQ Y+ H + S ++ S D + DL++ ++ H
Sbjct: 176 WDVRTHRLLQHYQLH--SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH 232
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 264 (98.0 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 72/257 (28%), Positives = 112/257 (43%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P A GH+ V + +F+ GN S +D+T+RLW R +K+H VR V
Sbjct: 49 PHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSV 108
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+AD L++ D+ I W + R + H V KF+ ++VS D+++
Sbjct: 109 DFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 127 RAWDCRSHSTEPIQIIDSFQDSV-----MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
+ WD S Q +++F DSV + T I D VR +DIR+ R L
Sbjct: 169 KIWDTTSK-----QCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQH 223
Query: 182 DLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
VNC+S GN ++ + D T+++LD G L+ +GH F +
Sbjct: 224 YQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSF---SK 280
Query: 240 DAHV-TGGSEDGYIYFW 255
D + T G D + W
Sbjct: 281 DGELFTSGGADAQVLVW 297
Score = 181 (68.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 59/266 (22%), Positives = 112/266 (42%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHRGIHIKTYKSHGREVRDVHVTADN 72
KGH+ A+ +A F+ + + D + LW+ PH + Y H V + +
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAY--RYVGHKDVVTSLQFSPQG 72
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+ L S D+ + W + +F+ H + V +V F+ +V+A D+S++ W
Sbjct: 73 NLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMY 132
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDI---RVGRELSDDLGQ 185
+ ++ + C + I+ S D T++ +D + SD +G
Sbjct: 133 RQRF----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGF 188
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH-VT 244
N + S +G CI ++ D +R+ D LLQ Y+ H C +C + + +
Sbjct: 189 -ANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCG---VNCLSFHPSGNSLV 244
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHS 270
S DG + DLV+ ++ + H+
Sbjct: 245 TASSDGTVKILDLVEGRLIYTLQGHT 270
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 47/240 (19%), Positives = 100/240 (41%)
Query: 47 PHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVN 106
P I + +K H + + + ++ + D + W + ++ GH+ V
Sbjct: 5 PEDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVT 64
Query: 107 AVKFNEYSSVVVSAGYDQSLRAW--DCRSHSTE------PIQIIDSFQDSVMSVCLTKTE 158
+++F+ +++ SA D+++R W D + S+E P++ +D D V T +E
Sbjct: 65 SLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLV--TASE 122
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
D +++ + + R L V C S DG I++ D T+++ D ++
Sbjct: 123 ------DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK 176
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
+ + + + + D N + GS D + WD+ ++ ++ HS V L
Sbjct: 177 QCVNNFSDSVGFANFVDFS-PNGTCIASAGS-DHAVRIWDIRMNRLLQHYQVHSCGVNCL 234
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 259 (96.2 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 72/267 (26%), Positives = 119/267 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P++ A GH+ AV F+ G+ S +D+T+R+W P+ +++H VR V
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
H +D ++ D+ + W + + H + V KF+ ++VSA D+++
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSD-DL 183
+ WD +S S E + V V + T I +D TV+ +D+R R L L
Sbjct: 170 KLWD-KS-SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL 227
Query: 184 -GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
VN +S GN ++ + DSTL++LD G LL GH + T + + +
Sbjct: 228 HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH--QGPATTVAFSRTGEY 285
Query: 243 VTGGSEDGYIYFW----DLVDASVVAK 265
G D + W D+VD V K
Sbjct: 286 FASGGSDEQVMVWKSNFDIVDHGEVTK 312
Score = 193 (73.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 52/232 (22%), Positives = 100/232 (43%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
E+ V + H V + F DG ++ D+T+++W HR + + H VR +
Sbjct: 95 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFS 154
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
D ++S D+ + WD S+ + + H V V F+ + + +AG D +++ W
Sbjct: 155 PDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ--PV 187
D R+H + S + +S + +I S D T++ D+ GR L G P
Sbjct: 215 DVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 274
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
++ S G + D + ++ +S +++ G + K + L +S
Sbjct: 275 TTVAFSRTGEYFASGGSDEQV-MVWKSNFDIVDH--GEVTKVPRPPATLASS 323
Score = 156 (60.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 54/225 (24%), Positives = 93/225 (41%)
Query: 56 YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115
+K H V V + + +L S D + W + +F GH+ V V F+
Sbjct: 15 FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 116 VVVSAGYDQSLRAW--DCRSHSTEPIQIIDSFQDSVMSV--CLTKTEIIGGSVDGTVRTF 171
++ S D+++R W + + ST + + +V SV C + S D TV+ +
Sbjct: 75 LLASGSRDKTVRIWVPNVKGEST----VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 172 DIRVGRELSDDLGQPVN---CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228
+ L L Q +N C S DG I+++ D T++L D+S+ E + Y H
Sbjct: 131 ATHRQKFLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH--G 187
Query: 229 SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
F T S + D + WD+ ++ ++ HS V
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 61/271 (22%), Positives = 104/271 (38%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P E + KGH AV F+ + S D + +W+ + H V V
Sbjct: 9 PSLERH-FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 67
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+ + L S D+ + W + FR H + V +V F V+A D+++
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-----IIGGSVDGTVRTFDIRVGRELSD 181
+ W +T + + S + V K I+ S D TV+ +D + RE
Sbjct: 128 KVW-----ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KSSRECVH 181
Query: 182 DL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
G V + G CI A+ +D+T+++ D T LLQ Y+ H +
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH--SAAVNGLSFHP 239
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
S ++ S D + DL++ ++ H
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 69/267 (25%), Positives = 117/267 (43%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P++ A GH+ AV F+ G+ S +D+T+R+W P+ +++H VR V
Sbjct: 81 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSV 140
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
H +D ++ D+ I W + + H + V KF+ ++VSA D+++
Sbjct: 141 HFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 200
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSD-DL 183
+ WD S E + V V + T + +D TV+ +D+R R L L
Sbjct: 201 KLWD--KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQL 258
Query: 184 -GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
VN +S GN ++ + DSTL++LD G LL GH + T + + +
Sbjct: 259 HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGH--QGPATTVAFSRTGEY 316
Query: 243 VTGGSEDGYIYFW----DLVDASVVAK 265
G D + W D++D V +
Sbjct: 317 FASGGSDEQVMVWKSNFDVIDYGEVLR 343
Score = 197 (74.4 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 52/232 (22%), Positives = 103/232 (44%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
E+ V + H V + F DG ++ D+TI++W+ HR + + H VR +
Sbjct: 126 ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFS 185
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
D ++S D+ + WD ++ + + H V V F+ + V +AG D +++ W
Sbjct: 186 PDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ--PV 187
D R+H + S + +S + ++ S D T++ D+ GR L G P
Sbjct: 246 DVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPA 305
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
++ S G + D + ++ +S +++ +Y G + + + L +S
Sbjct: 306 TTVAFSRTGEYFASGGSDEQV-MVWKSNFDVI-DY-GEVLRVQRPPATLASS 354
Score = 155 (59.6 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 54/228 (23%), Positives = 94/228 (41%)
Query: 56 YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115
+K H V V + + +L S D + W + +F GH+ V V F+
Sbjct: 46 FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 105
Query: 116 VVVSAGYDQSLRAW--DCRSHSTEPIQIIDSFQDSVMSV--CLTKTEIIGGSVDGTVRTF 171
++ S D+++R W + + ST + + +V SV C + S D T++ +
Sbjct: 106 LLASGSRDKTVRIWVPNIKGEST----VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 172 DIRVGRELSDDLGQPVN---CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228
+ L L Q +N C S DG I+++ D T++L D+++ E + Y H
Sbjct: 162 STHRQKFLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH--G 218
Query: 229 SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
F T S V D + WD+ ++ ++ HS V L
Sbjct: 219 GFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 266
Score = 148 (57.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 61/271 (22%), Positives = 104/271 (38%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P E + KGH AV F+ + S D + +W+ + H V V
Sbjct: 40 PSLERH-FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCV 98
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+ + L S D+ + W + FR H + V +V F V+A D+++
Sbjct: 99 NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 158
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-----IIGGSVDGTVRTFDIRVGRELSD 181
+ W ST + + S + V K I+ S D TV+ +D + RE
Sbjct: 159 KVW-----STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVH 212
Query: 182 DL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
G V + G C+ A+ +D+T+++ D T LLQ Y+ H +
Sbjct: 213 SYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLH--SAAVNALSFHP 270
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
S ++ S D + DL++ ++ H
Sbjct: 271 SGNYLVTASSDSTLKILDLMEGRLLYTLHGH 301
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 263 (97.6 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V +++ N +S DRT+++WN G I T H VR +H+
Sbjct: 339 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEK 394
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+++S D + WD+ TG+ + GH + V V+++ VVS YD ++ WD +
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPET 452
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
+ + + + V S+ ++ GS+D ++R +D+ G + G M
Sbjct: 453 ETC--LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 510
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253
N +++ DST+++ D TG+ LQ +G C N + +T S+DG +
Sbjct: 511 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITS-SDDGTVK 569
Query: 254 FWDL 257
WDL
Sbjct: 570 LWDL 573
Score = 206 (77.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 65/245 (26%), Positives = 106/245 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VLKGH+ V+ GN +S D T+++W+ G ++T H V + DN
Sbjct: 297 VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DN 354
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+IS DR + W+ TG I GH S V + +E VVS D +LR WD
Sbjct: 355 I-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIE 411
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+ + ++ +V V ++ G+ D V+ +D L G S+
Sbjct: 412 TGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
DG +++ LD+++R+ D TG + GH +S + L D + G+ D +
Sbjct: 470 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMEL--KDNILVSGNADSTV 525
Query: 253 YFWDL 257
WD+
Sbjct: 526 KIWDI 530
Score = 185 (70.2 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 45/166 (27%), Positives = 80/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+VL GH AV ++ DG +S D +++W+P + T + H V + D
Sbjct: 417 HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D 472
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D I WDV TG I GH+S + ++ + +++VS D +++ WD
Sbjct: 473 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDI 530
Query: 132 RS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG 176
++ + +Q Q +V + K +I S DGTV+ +D++ G
Sbjct: 531 KTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 576
Score = 176 (67.0 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 52/218 (23%), Positives = 94/218 (43%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
K K H V N +++S D + W TG+ +R GH V + + +
Sbjct: 296 KVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD- 353
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
++++S D++L+ W+ + + E I + +V + L + ++ GS D T+R +DI
Sbjct: 354 -NIIISGSTDRTLKVWN--AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 410
Query: 174 RVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK 231
G+ L +G V C+ DG +++ D +++ D T L +GH + +
Sbjct: 411 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 468
Query: 232 TDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
L HV GS D I WD+ + + H
Sbjct: 469 ----LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 502
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 265 (98.3 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 68/245 (27%), Positives = 116/245 (47%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V +++ N +S DRT+++WN G I T H VR +H+
Sbjct: 470 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEK 525
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+++S D + WD+ TG+ + GH + V V+++ VVS YD ++ WD +
Sbjct: 526 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPET 583
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
+ + + + V S+ ++ GS+D ++R +D+ G + G M
Sbjct: 584 ETC--LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 641
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKG-HICKSFKTDCCLTNSDAHVTGGSEDGYI 252
N +++ DST+++ D TG+ LQ +G H +S T CL + V S+DG +
Sbjct: 642 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVT--CLQFNKNFVITSSDDGTV 699
Query: 253 YFWDL 257
WDL
Sbjct: 700 KLWDL 704
Score = 206 (77.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 65/245 (26%), Positives = 106/245 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VLKGH+ V+ GN +S D T+++W+ G ++T H V + DN
Sbjct: 428 VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DN 485
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+IS DR + W+ TG I GH S V + +E VVS D +LR WD
Sbjct: 486 I-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIE 542
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+ + ++ +V V ++ G+ D V+ +D L G S+
Sbjct: 543 TGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 600
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
DG +++ LD+++R+ D TG + GH +S + L D + G+ D +
Sbjct: 601 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMEL--KDNILVSGNADSTV 656
Query: 253 YFWDL 257
WD+
Sbjct: 657 KIWDI 661
Score = 187 (70.9 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+VL GH AV ++ DG +S D +++W+P + T + H V + D
Sbjct: 548 HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D 603
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D I WDV TG I GH+S + ++ + +++VS D +++ WD
Sbjct: 604 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDI 661
Query: 132 RS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG 176
++ + +Q Q +V + K +I S DGTV+ +D+R G
Sbjct: 662 KTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTG 707
Score = 176 (67.0 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 52/218 (23%), Positives = 94/218 (43%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
K K H V N +++S D + W TG+ +R GH V + + +
Sbjct: 427 KVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD- 484
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
++++S D++L+ W+ + + E I + +V + L + ++ GS D T+R +DI
Sbjct: 485 -NIIISGSTDRTLKVWN--AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 541
Query: 174 RVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK 231
G+ L +G V C+ DG +++ D +++ D T L +GH + +
Sbjct: 542 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 599
Query: 232 TDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
L HV GS D I WD+ + + H
Sbjct: 600 ----LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 633
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 263 (97.6 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V +++ N +S DRT+++WN G I T H VR +H+
Sbjct: 339 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEK 394
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+++S D + WD+ TG+ + GH + V V+++ VVS YD ++ WD +
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPET 452
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
+ + + + V S+ ++ GS+D ++R +D+ G + G M
Sbjct: 453 ETC--LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 510
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253
N +++ DST+++ D TG+ LQ +G C N + +T S+DG +
Sbjct: 511 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITS-SDDGTVK 569
Query: 254 FWDL 257
WDL
Sbjct: 570 LWDL 573
Score = 206 (77.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 65/245 (26%), Positives = 106/245 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VLKGH+ V+ GN +S D T+++W+ G ++T H V + DN
Sbjct: 297 VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DN 354
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+IS DR + W+ TG I GH S V + +E VVS D +LR WD
Sbjct: 355 I-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIE 411
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+ + ++ +V V ++ G+ D V+ +D L G S+
Sbjct: 412 TGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
DG +++ LD+++R+ D TG + GH +S + L D + G+ D +
Sbjct: 470 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMEL--KDNILVSGNADSTV 525
Query: 253 YFWDL 257
WD+
Sbjct: 526 KIWDI 530
Score = 185 (70.2 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 45/166 (27%), Positives = 80/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+VL GH AV ++ DG +S D +++W+P + T + H V + D
Sbjct: 417 HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D 472
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D I WDV TG I GH+S + ++ + +++VS D +++ WD
Sbjct: 473 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDI 530
Query: 132 RS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG 176
++ + +Q Q +V + K +I S DGTV+ +D++ G
Sbjct: 531 KTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 576
Score = 176 (67.0 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 52/218 (23%), Positives = 94/218 (43%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
K K H V N +++S D + W TG+ +R GH V + + +
Sbjct: 296 KVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD- 353
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
++++S D++L+ W+ + + E I + +V + L + ++ GS D T+R +DI
Sbjct: 354 -NIIISGSTDRTLKVWN--AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 410
Query: 174 RVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK 231
G+ L +G V C+ DG +++ D +++ D T L +GH + +
Sbjct: 411 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 468
Query: 232 TDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
L HV GS D I WD+ + + H
Sbjct: 469 ----LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 502
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 262 (97.3 bits), Expect = 8.8e-22, P = 8.8e-22
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V +++ N +S DRT+++WN G I T H VR +H+
Sbjct: 297 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEK 352
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+++S D + WD+ TG+ + GH + V V+++ VVS YD ++ WD +
Sbjct: 353 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPET 410
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
+ + + + V S+ ++ GS+D ++R +D+ G + G M
Sbjct: 411 ETC--LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 468
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253
N +++ DST+++ D TG+ LQ +G C N + +T S+DG +
Sbjct: 469 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS-SDDGTVK 527
Query: 254 FWDL 257
WDL
Sbjct: 528 LWDL 531
Score = 206 (77.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 65/245 (26%), Positives = 106/245 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VLKGH+ V+ GN +S D T+++W+ G ++T H V + DN
Sbjct: 255 VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DN 312
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+IS DR + W+ TG I GH S V + +E VVS D +LR WD
Sbjct: 313 I-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIE 369
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+ + ++ +V V ++ G+ D V+ +D L G S+
Sbjct: 370 TGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 427
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
DG +++ LD+++R+ D TG + GH +S + L D + G+ D +
Sbjct: 428 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMEL--KDNILVSGNADSTV 483
Query: 253 YFWDL 257
WD+
Sbjct: 484 KIWDI 488
Score = 186 (70.5 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+VL GH AV ++ DG +S D +++W+P + T + H V + D
Sbjct: 375 HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D 430
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D I WDV TG I GH+S + ++ + +++VS D +++ WD
Sbjct: 431 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDI 488
Query: 132 RS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG 176
++ + +Q + Q +V + K +I S DGTV+ +D++ G
Sbjct: 489 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 534
Score = 176 (67.0 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 52/218 (23%), Positives = 94/218 (43%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
K K H V N +++S D + W TG+ +R GH V + + +
Sbjct: 254 KVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD- 311
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
++++S D++L+ W+ + + E I + +V + L + ++ GS D T+R +DI
Sbjct: 312 -NIIISGSTDRTLKVWN--AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 368
Query: 174 RVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK 231
G+ L +G V C+ DG +++ D +++ D T L +GH + +
Sbjct: 369 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 426
Query: 232 TDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
L HV GS D I WD+ + + H
Sbjct: 427 ----LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 460
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 259 (96.2 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 71/250 (28%), Positives = 117/250 (46%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGK-DRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
+ V+ GH G V GN + G DR I++W+ G + H VR V V+
Sbjct: 165 SRVISGHLGWVRCIAVE-PGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVS 223
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+ L SCG DRQ+ WD+ +VIR + GH S V ++ + V+ ++G D + R W
Sbjct: 224 TKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIW 283
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPV 187
D R+ + + + ++V SV T +II GS D TVR +D+ G+ +
Sbjct: 284 DMRTKAN--VHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKK 341
Query: 188 NCISMS-NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
+ S+ + + AS ++ G+ +Q GH S +C NS+ + G
Sbjct: 342 SVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHT--SI-VNCMAANSEGVLVSG 398
Query: 247 SEDGYIYFWD 256
++G ++FWD
Sbjct: 399 GDNGTMFFWD 408
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 8 RTEANV--LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
RT+ANV L GH V + ++ D T+RLW+ G + T +H + VR
Sbjct: 286 RTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRS 345
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
+ + S D I W G+ ++ GH S VN + N V+VS G + +
Sbjct: 346 IVLHPSLYMFASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANS-EGVLVSGGDNGT 403
Query: 126 LRAWDCRS-HSTE----PIQ--IIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVG 176
+ WD R+ ++ + P+Q +DS + + ++C ++ +I D T++ + +
Sbjct: 404 MFFWDWRTGYNFQRFQAPVQPGSMDS-EAGIFAMCFDQSGSRLITAEADKTIKVY--KED 460
Query: 177 RELSDDLGQPVN 188
E S++ P+N
Sbjct: 461 DEASEE-SHPIN 471
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 262 (97.3 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V +++ N +S DRT+++WN G I T H VR +H+
Sbjct: 337 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEK 392
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+++S D + WD+ TG+ + GH + V V+++ VVS YD ++ WD +
Sbjct: 393 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPET 450
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
+ + + + V S+ ++ GS+D ++R +D+ G + G M
Sbjct: 451 ETC--LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 508
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253
N +++ DST+++ D TG+ LQ +G C N + +T S+DG +
Sbjct: 509 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS-SDDGTVK 567
Query: 254 FWDL 257
WDL
Sbjct: 568 LWDL 571
Score = 206 (77.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 65/245 (26%), Positives = 106/245 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VLKGH+ V+ GN +S D T+++W+ G ++T H V + DN
Sbjct: 295 VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DN 352
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+IS DR + W+ TG I GH S V + +E VVS D +LR WD
Sbjct: 353 I-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIE 409
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+ + ++ +V V ++ G+ D V+ +D L G S+
Sbjct: 410 TGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 467
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
DG +++ LD+++R+ D TG + GH +S + L D + G+ D +
Sbjct: 468 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMEL--KDNILVSGNADSTV 523
Query: 253 YFWDL 257
WD+
Sbjct: 524 KIWDI 528
Score = 186 (70.5 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+VL GH AV ++ DG +S D +++W+P + T + H V + D
Sbjct: 415 HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D 470
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D I WDV TG I GH+S + ++ + +++VS D +++ WD
Sbjct: 471 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDI 528
Query: 132 RS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG 176
++ + +Q + Q +V + K +I S DGTV+ +D++ G
Sbjct: 529 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 574
Score = 176 (67.0 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 52/218 (23%), Positives = 94/218 (43%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
K K H V N +++S D + W TG+ +R GH V + + +
Sbjct: 294 KVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD- 351
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
++++S D++L+ W+ + + E I + +V + L + ++ GS D T+R +DI
Sbjct: 352 -NIIISGSTDRTLKVWN--AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 408
Query: 174 RVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK 231
G+ L +G V C+ DG +++ D +++ D T L +GH + +
Sbjct: 409 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 466
Query: 232 TDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
L HV GS D I WD+ + + H
Sbjct: 467 ----LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 500
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 67/253 (26%), Positives = 111/253 (43%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P++ A GH+ AV F+ G+ S +D+T+R+W P+ +++H VR V
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
H +D L++ D+ + W R + H + V KF+ ++VSA D+++
Sbjct: 110 HFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSD-DL 183
+ WD S E + V V + T I +D TV+ +D R R + L
Sbjct: 170 KLWD--KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQL 227
Query: 184 -GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
VN +S GN ++ + DSTL++LD G LL GH + T + + +
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH--QGPATTVAFSRTGEY 285
Query: 243 VTGGSEDGYIYFW 255
G D + W
Sbjct: 286 FASGGSDEQVMVW 298
Score = 161 (61.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 62/271 (22%), Positives = 108/271 (39%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P E + KGH AV F+ + + S D T+ +W+ + H V V
Sbjct: 9 PSLERH-FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCV 67
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+ + L S D+ + W + FR H + V +V F ++V+A D+++
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTV 127
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-----IIGGSVDGTVRTFDIRVGRELSD 181
+ W ST + + S + V K I+ S D TV+ +D + RE
Sbjct: 128 KVW-----STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVH 181
Query: 182 DL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
G V + G CI A+ +D+T+++ D T L+Q Y+ H +
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLH--SAAVNALSFHP 239
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
S ++ S D + DL++ ++ H
Sbjct: 240 SGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Score = 159 (61.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 56/228 (24%), Positives = 93/228 (40%)
Query: 56 YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115
+K H V V + + L S D + W + +F GH+ V V F+
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 116 VVVSAGYDQSLRAW--DCRSHSTEPIQIIDSFQDSVMSV--CLTKTEIIGGSVDGTVRTF 171
++ S D+++R W + + ST + + +V SV C ++ S D TV+ +
Sbjct: 75 LLASGSRDKTVRIWVPNVKGEST----VFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 172 DIRVGRELSDDLGQPVN---CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228
R L L Q +N C S DG I+++ D T++L D+++ E + Y H
Sbjct: 131 STHRQRFLFS-LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH--G 187
Query: 229 SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
F T S + D + WD +V ++ HS V L
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNAL 235
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 257 (95.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 69/247 (27%), Positives = 114/247 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V + + + S DRTI++WN G T H VR + V+ +
Sbjct: 138 VISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRH 197
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L SCG D+ + WD+ T +VIR + GH S V + + ++V+ G D R WD R
Sbjct: 198 PYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMR 257
Query: 133 SHSTEPIQIIDSFQDSVMSV-CL-TKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCI 190
+ S I ++ +V V C ++I GS+D TVR +D+ G+ +
Sbjct: 258 TRSN--IHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIR 315
Query: 191 SMS-NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249
S++ + AS +++ GE +Q ++GH + + N D + G ++
Sbjct: 316 SLATHPREFTFASASTGSIKQWKCPGGEFMQNFEGH---NAIINTLSVNEDNVLFSGGDN 372
Query: 250 GYIYFWD 256
G + FWD
Sbjct: 373 GSMSFWD 379
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 53/229 (23%), Positives = 93/229 (40%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNE 112
++ H VR + V +N S GDR I W+++TG + GH S V + +
Sbjct: 136 MRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSP 195
Query: 113 YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL-TKTEI-IGGSVDGTVRT 170
+ S G D+ ++ WD ++ I+ V ++ L + ++ + G DG R
Sbjct: 196 RHPYLFSCGEDKMVKCWDLETNKV--IRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARV 253
Query: 171 FDIRVGRE---LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHIC 227
+D+R LS G + D I S LD+T+RL D + G+ + H
Sbjct: 254 WDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGS-LDATVRLWDLAAGKTMGVLTHHK- 311
Query: 228 KSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
K ++ T+ + G I W + F+ H+ ++ L
Sbjct: 312 KGIRS--LATHPREFTFASASTGSIKQWKCPGGEFMQNFEGHNAIINTL 358
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 31/126 (24%), Positives = 54/126 (42%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
R+ +VL GH G V + ++ D T+RLW+ G + H + +R +
Sbjct: 259 RSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSL- 317
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
T + I W G ++ F GH + +N + NE +V+ S G + S+
Sbjct: 318 ATHPREFTFASASTGSIKQWKCPGGEFMQNFEGHNAIINTLSVNE-DNVLFSGGDNGSMS 376
Query: 128 AWDCRS 133
WD ++
Sbjct: 377 FWDWKT 382
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 262 (97.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V +++ N +S DRT+++WN G I T H VR +H+
Sbjct: 417 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEK 472
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+++S D + WD+ TG+ + GH + V V+++ VVS YD ++ WD +
Sbjct: 473 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPET 530
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
+ + + + V S+ ++ GS+D ++R +D+ G + G M
Sbjct: 531 ETC--LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 588
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253
N +++ DST+++ D TG+ LQ +G C N + +T S+DG +
Sbjct: 589 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS-SDDGTVK 647
Query: 254 FWDL 257
WDL
Sbjct: 648 LWDL 651
Score = 206 (77.6 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 65/245 (26%), Positives = 106/245 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VLKGH+ V+ GN +S D T+++W+ G ++T H V + DN
Sbjct: 375 VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DN 432
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+IS DR + W+ TG I GH S V + +E VVS D +LR WD
Sbjct: 433 I-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIE 489
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+ + ++ +V V ++ G+ D V+ +D L G S+
Sbjct: 490 TGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 547
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
DG +++ LD+++R+ D TG + GH +S + L D + G+ D +
Sbjct: 548 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMEL--KDNILVSGNADSTV 603
Query: 253 YFWDL 257
WD+
Sbjct: 604 KIWDI 608
Score = 186 (70.5 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+VL GH AV ++ DG +S D +++W+P + T + H V + D
Sbjct: 495 HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D 550
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D I WDV TG I GH+S + ++ + +++VS D +++ WD
Sbjct: 551 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDI 608
Query: 132 RS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG 176
++ + +Q + Q +V + K +I S DGTV+ +D++ G
Sbjct: 609 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 654
Score = 176 (67.0 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 52/218 (23%), Positives = 94/218 (43%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
K K H V N +++S D + W TG+ +R GH V + + +
Sbjct: 374 KVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD- 431
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
++++S D++L+ W+ + + E I + +V + L + ++ GS D T+R +DI
Sbjct: 432 -NIIISGSTDRTLKVWN--AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 488
Query: 174 RVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK 231
G+ L +G V C+ DG +++ D +++ D T L +GH + +
Sbjct: 489 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 546
Query: 232 TDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
L HV GS D I WD+ + + H
Sbjct: 547 ----LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 580
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 262 (97.3 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V +++ N +S DRT+++WN G I T H VR +H+
Sbjct: 422 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEK 477
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+++S D + WD+ TG+ + GH + V V+++ VVS YD ++ WD +
Sbjct: 478 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPET 535
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
+ + + + V S+ ++ GS+D ++R +D+ G + G M
Sbjct: 536 ETC--LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 593
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253
N +++ DST+++ D TG+ LQ +G C N + +T S+DG +
Sbjct: 594 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS-SDDGTVK 652
Query: 254 FWDL 257
WDL
Sbjct: 653 LWDL 656
Score = 206 (77.6 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 65/245 (26%), Positives = 106/245 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VLKGH+ V+ GN +S D T+++W+ G ++T H V + DN
Sbjct: 380 VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DN 437
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+IS DR + W+ TG I GH S V + +E VVS D +LR WD
Sbjct: 438 I-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIE 494
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+ + ++ +V V ++ G+ D V+ +D L G S+
Sbjct: 495 TGQC--LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 552
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
DG +++ LD+++R+ D TG + GH +S + L D + G+ D +
Sbjct: 553 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMEL--KDNILVSGNADSTV 608
Query: 253 YFWDL 257
WD+
Sbjct: 609 KIWDI 613
Score = 186 (70.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+VL GH AV ++ DG +S D +++W+P + T + H V + D
Sbjct: 500 HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D 555
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D I WDV TG I GH+S + ++ + +++VS D +++ WD
Sbjct: 556 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDI 613
Query: 132 RS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG 176
++ + +Q + Q +V + K +I S DGTV+ +D++ G
Sbjct: 614 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 659
Score = 176 (67.0 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 52/218 (23%), Positives = 94/218 (43%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
K K H V N +++S D + W TG+ +R GH V + + +
Sbjct: 379 KVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD- 436
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
++++S D++L+ W+ + + E I + +V + L + ++ GS D T+R +DI
Sbjct: 437 -NIIISGSTDRTLKVWN--AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI 493
Query: 174 RVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK 231
G+ L +G V C+ DG +++ D +++ D T L +GH + +
Sbjct: 494 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS 551
Query: 232 TDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
L HV GS D I WD+ + + H
Sbjct: 552 ----LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 585
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 257 (95.5 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 70/256 (27%), Positives = 111/256 (43%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P A GH+ V + +F+ GN S +DRT+RLW R +K+H VR V
Sbjct: 49 PHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSV 108
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+AD L++ D+ I W + R + H V KF+ ++VS D+++
Sbjct: 109 DFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 127 RAWDCRSHSTEPIQIIDSFQDSV-----MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
+ WD T Q +++F DSV + T I D V+ +DIR+ + L
Sbjct: 169 KIWD-----TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQH 223
Query: 182 DLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
VNC+S GN ++ + D T+++LD G L+ +GH F +
Sbjct: 224 YQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVS--FSKD 281
Query: 240 DAHVTGGSEDGYIYFW 255
+T G D + W
Sbjct: 282 GELLTSGGADAQVLIW 297
Score = 177 (67.4 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 59/267 (22%), Positives = 116/267 (43%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHRGIHIKTYKSHGREVRDVHVTADN 72
KGH+ A+ +A F+ + + D + LW+ PH + Y H V + +
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAY--RYVGHKDVVTSLQFSPQG 72
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+ L S DR + W + +F+ H + V +V F+ ++V+A D+S++ W
Sbjct: 73 NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMF 132
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDI---RVGRELSDDLGQ 185
+ ++ + C + I+ S D T++ +D + SD +G
Sbjct: 133 RQRF----LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN--SDAHV 243
N + + +G CI ++ D +++ D +LLQ Y+ H C +C + ++ V
Sbjct: 189 -ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG---VNCLSFHPLGNSLV 244
Query: 244 TGGSEDGYIYFWDLVDASVVAKFKAHS 270
T S DG + DL++ ++ + H+
Sbjct: 245 TASS-DGTVKMLDLIEGRLIYTLQGHT 270
Score = 122 (48.0 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 42/233 (18%), Positives = 96/233 (41%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
+++K H + + + ++ + D + W + ++ GH+ V +++F+
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 114 SSVVVSAGYDQSLRAW--DCRSHSTE------PIQIIDSFQDSVMSVCLTKTEIIGGSVD 165
+++ SA D+++R W D + S+E P++ +D D + V T +E D
Sbjct: 72 GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLV--TASE------D 123
Query: 166 GTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223
+++ + + R L V C S DG I++ D T+++ D + + + +
Sbjct: 124 KSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 224 GHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
+ F + + D + WD+ ++ ++ HS V L
Sbjct: 184 DSV--GFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCL 234
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 74/255 (29%), Positives = 128/255 (50%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKS-HGRE--VRDVHVTADN 72
GH VL ARF+ G+Y S G DR I LWN G +K Y +G + + D+ + D
Sbjct: 48 GHTAEVLVARFDPSGSYFASGGMDRQILLWNVF-G-DVKNYGVLNGCKGAITDLQWSRD- 104
Query: 73 SKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWD 130
S+++ C D + WD +G+ IRK +GH VNA+ + S ++ S D +++ WD
Sbjct: 105 SRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWD 164
Query: 131 CRSHSTEPIQIIDS-FQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDL-GQP-- 186
RS I+ I+ + + +++ T++ G +DG ++ +D+R S L G
Sbjct: 165 SRSKDC--IKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLR-NNHCSHVLKGHKDI 221
Query: 187 VNCISMSNDGNCILASCLDSTLRLLD----RSTGELLQEYKG--HICKSFKTDCCLTNSD 240
+ +++S DG+ +L++ +D+T+R+ D S LQ ++G H + + +
Sbjct: 222 ITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNS 281
Query: 241 AHVTGGSEDGYIYFW 255
V GS D +Y W
Sbjct: 282 RFVGAGSSDKNVYVW 296
Score = 147 (56.8 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 42/167 (25%), Positives = 79/167 (47%)
Query: 13 VLKGHEGAVLAARFNGDGN--YCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
VL G +GA+ +++ D YC S D + W+ G I+ +K H V + V
Sbjct: 88 VLNGCKGAITDLQWSRDSRVVYCSS--SDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLK 145
Query: 71 DNSKLI-SCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
S+L+ S D + WD + I+ + + AV + + V G D +++ W
Sbjct: 146 VGSELLTSVSDDCTMKVWDSRSKDCIKTIE-EKYPLTAVAIAQQGTQVFIGGIDGAIKIW 204
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIR 174
D R++ ++ +D + S+ ++K + ++ S+D TVR FD++
Sbjct: 205 DLRNNHCS--HVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVK 249
Score = 137 (53.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 35/124 (28%), Positives = 65/124 (52%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--P----HRGIHIKTYKSHGREVR 64
++VLKGH+ + + + DG+ LS D T+R+++ P R + I HG+E
Sbjct: 212 SHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHN 271
Query: 65 DVHVT-ADNSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
+ V + NS+ + G D+ ++ W +TG + GHE VN V F+ + +++S
Sbjct: 272 LLGVAWSRNSRFVGAGSSDKNVYVWS-ATGDLRYVLPGHEGSVNHVDFHPHQDIILSCSS 330
Query: 123 DQSL 126
D+++
Sbjct: 331 DRTI 334
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 72/258 (27%), Positives = 116/258 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P+ A L GH+ AV+ +F+ G+ S +D+T+ LW P +K+H VR V
Sbjct: 51 PQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSV 110
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
H ++D L++ D+ I W V + + H + V +F+ ++ SA D+++
Sbjct: 111 HFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTV 170
Query: 127 RAWDCRSHSTEPIQII---DSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDL 183
+ WD S E I F + V + T I D TV+ +D+R+ R L
Sbjct: 171 KLWD--KTSRECIHSFCEHGGFANHV-EFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQ 227
Query: 184 GQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH----ICKSFKTDCCLT 237
VN +S GN ++ + DSTL++LD G LL GH C +F
Sbjct: 228 VHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSR----- 282
Query: 238 NSDAHVTGGSEDGYIYFW 255
D +GGS++ + W
Sbjct: 283 TGDFFASGGSDE-QVMVW 299
Score = 207 (77.9 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 56/226 (24%), Positives = 102/226 (45%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
E+ V K H V + F+ DG ++ D+TI++W HR + + H VR +
Sbjct: 96 ESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFS 155
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
D + S D+ + WD ++ I F H N V+F+ + + +AG D++++ W
Sbjct: 156 PDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
Query: 130 DCRSHST-EPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ--P 186
D R + + Q+ + +S +S + +I S D T++ D+ GR L G P
Sbjct: 216 DVRMNRLLQHYQVHTAAVNS-LSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGP 274
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKT 232
C++ S G+ + D + + T +Y G + K+ K+
Sbjct: 275 ATCVAFSRTGDFFASGGSDEQVMVW--KTNFSAADYDG-VLKTHKS 317
Score = 143 (55.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 57/273 (20%), Positives = 104/273 (38%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
SV + P E + +GH A+ + F+ + S D +++W+ + H
Sbjct: 5 SVEEDPSLERH-FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKD 63
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
V V + + S D+ + W S F+ H + V +V F+ +V+A
Sbjct: 64 AVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTAS 123
Query: 122 YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGREL 179
D++++ W H + + + + V + I S D TV+ +D + RE
Sbjct: 124 DDKTIKVWTV--HRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD-KTSREC 180
Query: 180 SDDL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCL 236
G N + G CI A+ D T+++ D LLQ Y+ H
Sbjct: 181 IHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAV--NSLSF 238
Query: 237 TNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
S ++ S D + DL++ ++ H
Sbjct: 239 HPSGNYLITASNDSTLKILDLLEGRLLYTLHGH 271
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 254 (94.5 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 69/258 (26%), Positives = 116/258 (44%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+GHE AVL+ ++ D S DRT+++W+ G T + H VR V + + +S
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSV-IFSHDS 350
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+L++ D + WD TG + GH V +V F+ S ++ SA D +++ WD +
Sbjct: 351 RLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 410
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDL-GQP--VN 188
S + ++ +D V SV + + S D TV+ +D G L L G V
Sbjct: 411 GSLQ--HTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG-SLQHTLEGHRDWVR 467
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
+ S+D + ++ D T+R+ D G +GH S T ++ + S
Sbjct: 468 SVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGH--SSLVTSVSFSHDSRLLASASN 525
Query: 249 DGYIYFWDLVDASVVAKF 266
D + WD+ S+ F
Sbjct: 526 DQTVRIWDIEARSLQHTF 543
Score = 203 (76.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 55/205 (26%), Positives = 93/205 (45%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L+GH V + F+ D L+ D T+++W+ G T + H VR V + D
Sbjct: 332 HTLEGHSDLVRSVIFSHDSRL-LASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHD 390
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+ L S D + WD TG + GH V +V F+ S ++ SA D +++ WD
Sbjct: 391 SQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 450
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVG--RELSDDLGQPV 187
+ S + ++ +D V SV + + S D TVR +D G + + V
Sbjct: 451 GTGSLQ--HTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLV 508
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
+S S+D + ++ D T+R+ D
Sbjct: 509 TSVSFSHDSRLLASASNDQTVRIWD 533
Score = 189 (71.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 59/234 (25%), Positives = 101/234 (43%)
Query: 45 WNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESE 104
W+P ++ + H V V + D+ L S DR + WD TG + GH
Sbjct: 285 WSPC----LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDL 340
Query: 105 VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGG 162
V +V F+ S ++ SA D +++ WD + S + ++ +D V SV + +
Sbjct: 341 VRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQ--HTLEGHRDWVRSVIFSHDSQLLASA 397
Query: 163 SVDGTVRTFDIRVGRELSDDL-GQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
S D TV+ +D G L L G V + S+D + ++ DST+++ D TG L
Sbjct: 398 SDDSTVKIWDTGTG-SLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQ 456
Query: 220 QEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
+GH + + ++ + S+D + WD S + HS +V
Sbjct: 457 HTLEGH--RDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLV 508
Score = 179 (68.1 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 47/164 (28%), Positives = 73/164 (44%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L+GH V + F+ D S D T+++W+ G T + H VR V + D
Sbjct: 373 HTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHD 432
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+ L S D + WD TG + GH V +V F+ S ++ SA D+++R WD
Sbjct: 433 SQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDT 492
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDI 173
S + ++ V SV + + S D TVR +DI
Sbjct: 493 EKGSHK--HTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDI 534
Score = 174 (66.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/126 (30%), Positives = 59/126 (46%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L+GH V + F+ D S D T+++W+ G T + H VR V + D
Sbjct: 415 HTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHD 474
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+ L S DR + WD G GH S V +V F+ S ++ SA DQ++R WD
Sbjct: 475 SRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDI 534
Query: 132 RSHSTE 137
+ S +
Sbjct: 535 EARSLQ 540
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 252 (93.8 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 67/254 (26%), Positives = 119/254 (46%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P V++GH G V + F+ + + DRTI++W+ G+ T H +VR +
Sbjct: 165 PWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGL 224
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
V+ ++ + S G D+Q+ WD+ +VIR + GH S V + + V+++ G D
Sbjct: 225 AVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVC 284
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSD--D 182
R WD R+ I + ++V SV T+ ++ GS D T++ +D+R G+ +S
Sbjct: 285 RVWDIRTKMQ--IFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTH 342
Query: 183 LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
+ V +++ N ++ D+T + GE K+ +
Sbjct: 343 HKKSVRAMTLHPKENAFASASADNTKKF-SLPKGEFCHNMLSQQ-KTIINAMAVNEDGVM 400
Query: 243 VTGGSEDGYIYFWD 256
VTGG ++G I+FWD
Sbjct: 401 VTGG-DNGSIWFWD 413
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 249 (92.7 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 62/246 (25%), Positives = 107/246 (43%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSK 74
+GH ++ FN + D T +LW+ G + T H E+ + +
Sbjct: 174 RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR 233
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L++ D WDV +GR + GH E++ V+FN S++ +A D+S + WD +
Sbjct: 234 LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWD--AE 291
Query: 135 STEPIQIIDSFQDSVMSVCLTKT-EIIG-GSVDGTVRTFDIRVGR---ELSDDLGQPVNC 189
+ + + D V+ VC T ++I S DGT R F + +L G+ ++
Sbjct: 292 GGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGE-ISK 350
Query: 190 ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249
+ + G+ +L + +D T R+ TG LQ +GH + F C + GS+D
Sbjct: 351 VCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFS--CAFNYEGDTIITGSKD 408
Query: 250 GYIYFW 255
W
Sbjct: 409 NTCRIW 414
Score = 226 (84.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 60/243 (24%), Positives = 106/243 (43%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+ H + FN G+ ++ DRT ++W+ G + T + H V +
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 74 KLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
++ G D+ W TG+ FRGH +E+ + FN S++V + D + + WD
Sbjct: 148 DKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVE 207
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRE---LSDDLGQPV 187
S E + + ++S+C T ++ GS D T +D+ GR+ LS G+ +
Sbjct: 208 SG--EEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGE-I 264
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
+C+ + D + I + LD + ++ D G+ L GH D C + + S
Sbjct: 265 SCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGH--NDEVLDVCFNYTGQLIATAS 322
Query: 248 EDG 250
DG
Sbjct: 323 ADG 325
Score = 189 (71.6 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 62/267 (23%), Positives = 110/267 (41%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGK-DRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
E + L+GH V A FN ++ G D+T +LW+ G T++ H E+ +
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAF 185
Query: 69 TADNSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
S L++ G D WDV +G + GH +E+ ++ FN +V+ +D +
Sbjct: 186 NPQ-STLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAI 244
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLT-KTEIIG-GSVDGTVRTFDIRVGRELSDDLGQ 185
WD S + ++ + + V +I S+D + + +D G+ L+ LG
Sbjct: 245 LWDVPSG--RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGH 302
Query: 186 --PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHV 243
V + + G I + D T R+ T + L + +GH K + C + V
Sbjct: 303 NDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGH--KGEISKVCFNAQGSRV 360
Query: 244 TGGSEDGYIYFWDLVDASVVAKFKAHS 270
S D W + + + + HS
Sbjct: 361 LTASVDKTSRVWCVKTGACLQVLEGHS 387
Score = 180 (68.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 49/171 (28%), Positives = 83/171 (48%)
Query: 5 DLPR-TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREV 63
D+P + +VL GH G + +FN D + + D++ ++W+ G + T H EV
Sbjct: 247 DVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEV 306
Query: 64 RDV--HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
DV + T S G ++F D T + + + GH+ E++ V FN S V++A
Sbjct: 307 LDVCFNYTGQLIATASADGTSRVFSTD--TFQCLCQLEGHKGEISKVCFNAQGSRVLTAS 364
Query: 122 YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE---IIGGSVDGTVR 169
D++ R W ++ + +Q+++ D + S C E II GS D T R
Sbjct: 365 VDKTSRVWCVKTGAC--LQVLEGHSDEIFS-CAFNYEGDTIITGSKDNTCR 412
Score = 164 (62.8 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 57/229 (24%), Positives = 94/229 (41%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNE- 112
+ ++H + +V S I+ DR WD ++G + GH + V A+ FN
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 113 YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMS-VCLT----KTEIIGGSVDGT 167
Y V + +D++ + W S E + +F+ VCL T + GS+D T
Sbjct: 146 YGDKVATGSFDKTCKLW-----SAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTT 200
Query: 168 VRTFDIRVGRELSDDLGQPVNCISM--SNDGNCILASCLDSTLRLLDRSTGE---LLQEY 222
+ +D+ G E+S G IS+ + G+ ++ D T L D +G +L +
Sbjct: 201 AKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGH 260
Query: 223 KGHI-CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+G I C F DC L + S D WD +A H+
Sbjct: 261 RGEISCVQFNWDCSL------IATASLDKSCKVWDAEGGQCLATLLGHN 303
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/208 (22%), Positives = 89/208 (42%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
E + L GH +++ FN G+ ++ D T LW+ G + H E+ V
Sbjct: 211 EVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFN 270
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
D S + + D+ WD G+ + GH EV V FN ++ +A D + R +
Sbjct: 271 WDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVF 330
Query: 130 DCRSHSTEPIQII---DSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGR--ELSDD 182
ST+ Q + + + + VC + ++ SVD T R + ++ G ++ +
Sbjct: 331 -----STDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEG 385
Query: 183 LGQPVNCISMSNDGNCILASCLDSTLRL 210
+ + + +G+ I+ D+T R+
Sbjct: 386 HSDEIFSCAFNYEGDTIITGSKDNTCRI 413
Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
KL+ C ++ D + R + H + V FN+ S ++ YD++ + WD +
Sbjct: 64 KLLICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWD--T 121
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKT---EIIGGSVDGTVRTFDIRVGRELSDDLGQPVN-- 188
S E + ++ ++ V ++ ++ GS D T + + G+ G
Sbjct: 122 ASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIV 181
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
C++ + + +D+T +L D +GE + GH + C T D VTG S
Sbjct: 182 CLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISL-CFNTTGDRLVTG-SF 239
Query: 249 DGYIYFWDLVDASVVAKFKAH 269
D WD+ V H
Sbjct: 240 DHTAILWDVPSGRKVHVLSGH 260
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 29/116 (25%), Positives = 49/116 (42%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH VL FN G + D T R+++ + + H E+ V A S
Sbjct: 299 LLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGS 358
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
++++ D+ W V TG ++ GH E+ + FN +++ D + R W
Sbjct: 359 RVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 249 (92.7 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 62/249 (24%), Positives = 108/249 (43%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ +GH ++ FN + D T +LW+ G + T H E+ +
Sbjct: 171 HTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTS 230
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++I+ D + WD STGR + GH +E+++ F+ S++++ D++ WD
Sbjct: 231 GDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDA 290
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKT-EIIG-GSVDGTVRTFDIRVGR---ELSDDLGQP 186
S + + D ++ C T ++I S DGT R ++ + +L G+
Sbjct: 291 TSGKC--VATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGE- 347
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
++ IS + GN +L D T R+ D TG+ LQ +GH + F C V G
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFS--CAFNYKGNIVITG 405
Query: 247 SEDGYIYFW 255
S+D W
Sbjct: 406 SKDNSCRIW 414
Score = 227 (85.0 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 64/261 (24%), Positives = 111/261 (42%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL+ H + N G+ ++ DRT ++W+ G + T + H V +
Sbjct: 87 VLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPY 146
Query: 73 SKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
I+ G D+ W TG+ FRGH +E+ + FN S+VV + D + + WD
Sbjct: 147 GDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDI 206
Query: 132 RSHSTEPIQIIDSFQDSV-MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ--PVN 188
+S E + + + + +S + II GS D TV +D GR++ +G ++
Sbjct: 207 QS-GEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEIS 265
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
S D + IL +D T L D ++G+ + GH + D C + + S
Sbjct: 266 SALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEIL--DSCFDYTGKLIATASA 323
Query: 249 DGYIYFWDLVDASVVAKFKAH 269
DG ++ + K + H
Sbjct: 324 DGTARVYNATTRKCITKLEGH 344
Score = 191 (72.3 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 62/234 (26%), Positives = 97/234 (41%)
Query: 48 HRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNA 107
H K ++H + +V + S I+ DR WD ++G + GH + V A
Sbjct: 80 HNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYA 139
Query: 108 VKFNE-YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMS-VCLT----KTEIIG 161
+ FN Y + + +D++ + W S E + +F+ VCL+ T +
Sbjct: 140 IAFNNPYGDKIATGSFDKTCKLW-----SAETGKCYHTFRGHTAEIVCLSFNPQSTVVAT 194
Query: 162 GSVDGTVRTFDIRVGRELSDDLGQPVNCISMSND--GNCILASCLDSTLRLLDRSTGELL 219
GS+D T + +DI+ G E+ G IS+S D G+ I+ D T+ + D STG +
Sbjct: 195 GSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKV 254
Query: 220 QEYKGHICKS----FKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
GH + F DC L + GS D WD VA H
Sbjct: 255 HTLIGHCAEISSALFSWDCSL------ILTGSMDKTCMLWDATSGKCVATLTGH 302
Score = 180 (68.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 54/264 (20%), Positives = 107/264 (40%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGK-DRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
E + L+GH V A FN ++ G D+T +LW+ G T++ H E+ +
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSF 185
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
++ + + D WD+ +G + GH +E+ ++ F+ +++ +D ++
Sbjct: 186 NPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVV 245
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVN 188
WD + I + S + I+ GS+D T +D G+ ++ G
Sbjct: 246 WDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDE 305
Query: 189 CISMSND--GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
+ D G I + D T R+ + +T + + + +GH + K + G
Sbjct: 306 ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS--FNPQGNRLLTG 363
Query: 247 SEDGYIYFWDLVDASVVAKFKAHS 270
S D WD+ + + H+
Sbjct: 364 SSDKTARIWDVQTGQCLQVLEGHT 387
Score = 162 (62.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 40/206 (19%), Positives = 91/206 (44%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
E L GH +++ F+ G+ ++ D T+ +W+ G + T H E+ +
Sbjct: 211 EVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFS 270
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
D S +++ D+ WD ++G+ + GH+ E+ F+ ++ +A D + R +
Sbjct: 271 WDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGR---ELSDDLG 184
+ + I ++ + + + ++ GS D T R +D++ G+ L
Sbjct: 331 NATTRKC--ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTD 388
Query: 185 QPVNCISMSNDGNCILASCLDSTLRL 210
+ +C + + GN ++ D++ R+
Sbjct: 389 EIFSC-AFNYKGNIVITGSKDNSCRI 413
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 259 (96.2 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 64/244 (26%), Positives = 114/244 (46%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V +++ +G N +S DRT+++W+ G + T + H VR +H+ S
Sbjct: 1031 LVGHTGGVWSSQMSG--NIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL--HGS 1086
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
K++S D + WD+ G + GH + V V+++ ++VS YD ++ W
Sbjct: 1087 KVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIW--HP 1142
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
E + + + V S+ ++ GS+D ++R +D+ G +G M
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGME 1202
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253
N +++ DST+++ D +TG+ LQ G K CL + V S+DG +
Sbjct: 1203 LRQNILVSGNADSTVKVWDITTGQCLQTLSGPN-KHHSAVTCLQFNSRFVVTSSDDGTVK 1261
Query: 254 FWDL 257
WD+
Sbjct: 1262 LWDV 1265
Score = 197 (74.4 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 68/273 (24%), Positives = 114/273 (41%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P + VLKGH+ V+ GN +S D T+++W+ G ++T H V
Sbjct: 983 PVRKPKVLKGHDDHVITC-LQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSS 1041
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
++ + +IS DR + WD+ +G + +GH S V + + S VVS D +L
Sbjct: 1042 QMSGNI--IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL--HGSKVVSGSRDATL 1097
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP 186
R WD S + ++ +V V I+ G+ D V+ + L G
Sbjct: 1098 RVWDIEQGSC--LHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHT 1155
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
S+ DG +++ LD+++R+ D TG GH +S + L + + G
Sbjct: 1156 NRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGH--QSLTSGMELRQNI--LVSG 1211
Query: 247 SEDGYIYFWDLVDASVVAKF----KAHSLVVKL 275
+ D + WD+ + K HS V L
Sbjct: 1212 NADSTVKVWDITTGQCLQTLSGPNKHHSAVTCL 1244
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 51/214 (23%), Positives = 95/214 (44%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L+GH V +G + +S +D T+R+W+ +G + H VR V D
Sbjct: 1069 HTLQGHTSTVRCMHLHG--SKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY--D 1124
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D + W + +GH + V +++F+ VVS D S+R WD
Sbjct: 1125 GKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRVWDV 1182
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLG-----QP 186
+ + + + Q + L + ++ G+ D TV+ +DI G+ L G
Sbjct: 1183 ETGNCK--HTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSA 1240
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220
V C+ ++ ++ S D T++L D TG+ ++
Sbjct: 1241 VTCLQFNS--RFVVTSSDDGTVKLWDVKTGDFIR 1272
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 36/145 (24%), Positives = 61/145 (42%)
Query: 132 RSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNC 189
RS +++ D V++ CL + I+ GS D T++ + G+ L +G
Sbjct: 980 RSRPVRKPKVLKGHDDHVIT-CLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGV 1038
Query: 190 ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249
S GN I++ D TL++ D +G + +GH T C+ + V GS D
Sbjct: 1039 WSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHT----STVRCMHLHGSKVVSGSRD 1094
Query: 250 GYIYFWDLVDASVVAKFKAHSLVVK 274
+ WD+ S + H V+
Sbjct: 1095 ATLRVWDIEQGSCLHVLVGHLAAVR 1119
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 247 (92.0 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ +GH ++ FN + D T +LW+ G + T H E+ +
Sbjct: 171 HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTS 230
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+++I+ D + W+ TGR + GH +E+++ FN S++++ D++ + WD
Sbjct: 231 GNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDA 290
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKT-EIIG-GSVDGTVRTFDIRVGRELSDDL-GQP-- 186
+ + + D ++ C T ++I S DGT R F RE L G
Sbjct: 291 VNGKC--VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT-RECVTKLEGHEGE 347
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
++ IS + GN +L D T R+ D TG+ LQ +GH + F C + G
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFS--CAFNYKGDIIITG 405
Query: 247 SEDGYIYFW 255
S+D W
Sbjct: 406 SKDNTCRIW 414
Score = 226 (84.6 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 65/262 (24%), Positives = 109/262 (41%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL+ H + N G+ ++ DRT +LW+ G + T + H V +
Sbjct: 87 VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPY 146
Query: 73 SKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
I+ G D+ W V TG+ FRGH +E+ + FN S++V + D + + WD
Sbjct: 147 GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQPVNC 189
+S E + + ++S+ + II GS D TV ++ GR++ +G
Sbjct: 207 QSG--EEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEI 264
Query: 190 ISMSNDGNC--ILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
S + +C IL +D T +L D G+ + GH + D C + + S
Sbjct: 265 SSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEIL--DSCFDYTGKLIATAS 322
Query: 248 EDGYIYFWDLVDASVVAKFKAH 269
DG + V K + H
Sbjct: 323 ADGTARIFSAATRECVTKLEGH 344
Score = 196 (74.1 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 60/231 (25%), Positives = 98/231 (42%)
Query: 48 HRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNA 107
H+ K ++H + +V + S I+ DR WD ++G + GH + V A
Sbjct: 80 HKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYA 139
Query: 108 VKFNE-YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMS-VCLT----KTEIIG 161
+ FN Y + + +D++ + W S E + +F+ VCL+ T +
Sbjct: 140 IAFNNPYGDKIATGSFDKTCKLW-----SVETGKCYHTFRGHTAEIVCLSFNPQSTLVAT 194
Query: 162 GSVDGTVRTFDIRVGRELSDDLGQPVNCISMS--NDGNCILASCLDSTLRLLDRSTGELL 219
GS+D T + +DI+ G E+ G IS+S GN I+ D T+ + + TG +
Sbjct: 195 GSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKV 254
Query: 220 QEYKGHICKSFKTDCCLTNSDAH-VTGGSEDGYIYFWDLVDASVVAKFKAH 269
GH C + + N D + GS D WD V+ VA H
Sbjct: 255 YTLIGH-CAEISS--AVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGH 302
Score = 189 (71.6 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 58/266 (21%), Positives = 110/266 (41%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGK-DRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
E + L+GH V A FN ++ G D+T +LW+ G T++ H E+ +
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF 185
Query: 69 TADNSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
S L++ G D WD+ +G + GH +E+ ++ FN + +++ +D ++
Sbjct: 186 NPQ-STLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVT 244
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEII-GGSVDGTVRTFDIRVGRELSDDLGQP 186
W+ + + +I + +V +I GS+D T + +D G+ ++ G
Sbjct: 245 VWEADT-GRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHD 303
Query: 187 VNCISMSND--GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
+ D G I + D T R+ +T E + + +GH + K +
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKIS--FNPQGNRLL 361
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHS 270
GS D WD + + H+
Sbjct: 362 TGSSDKTARIWDAQTGQCLQVLEGHT 387
Score = 162 (62.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 43/206 (20%), Positives = 86/206 (41%)
Query: 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
E L GH +++ FN GN ++ D T+ +W G + T H E+
Sbjct: 211 EVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN 270
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
D S +++ D+ WD G+ + GH+ E+ F+ ++ +A D + R +
Sbjct: 271 WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF 330
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGR---ELSDDLG 184
+ E + ++ + + + ++ GS D T R +D + G+ L
Sbjct: 331 SAATR--ECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTD 388
Query: 185 QPVNCISMSNDGNCILASCLDSTLRL 210
+ +C + + G+ I+ D+T R+
Sbjct: 389 EIFSC-AFNYKGDIIITGSKDNTCRI 413
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 245 (91.3 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 81/285 (28%), Positives = 133/285 (46%)
Query: 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-IHIKTYKSHGREVRDVHVTAD---- 71
H V RF+ DG + ++ G ++T +++N G + K E +D + TA
Sbjct: 199 HSSVVCCVRFSRDGKF-IATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 72 --------NSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
+ KL++ G D+ I WD+ST R+I+ RGHE ++ ++ F +VS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 123 DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD-------- 172
D+S+R WD R T + S +D V +V ++ I GS+D TVR +D
Sbjct: 318 DRSVRIWDLR---TSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVE 374
Query: 173 -IRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRL--LD-----RSTGELLQEYKG 224
+ G E + V ++ SN+G I + LD T++L L+ +ST E+ Y G
Sbjct: 375 RLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVT--YIG 432
Query: 225 HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
H K F C T + ++ GS+D + FWD + + + H
Sbjct: 433 H--KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGH 475
Score = 161 (61.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 52/180 (28%), Positives = 83/180 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L+GHE + + F DG+ +S DR++R+W+ R S V V V+ D
Sbjct: 292 ILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL-RTSQCSLTLSIEDGVTTVAVSPDG 350
Query: 73 SKLISCGG-DRQIFYWDVSTGRVIRKF-------RGHESEVNAVKFNEYSSVVVSAGYDQ 124
KLI+ G DR + WD +TG ++ + GHE V +V F+ + S D+
Sbjct: 351 -KLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDR 409
Query: 125 SLRAWDCRSHSTEPIQIIDSF---QDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGREL 179
+++ W S + ++ +D V+SVC T I+ GS D V +D G L
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPL 469
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/123 (29%), Positives = 55/123 (44%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK-----TYKSHGREVRDVHVTA 70
GHE +V + F+ +G S DRT++LW+ K TY H V V T
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTP 444
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVN--AVKFNEYSS--VVVSAGYDQSL 126
DN ++S DR + +WD ++G + +GH + V AV N + + + D
Sbjct: 445 DNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKA 504
Query: 127 RAW 129
R W
Sbjct: 505 RIW 507
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 245 (91.3 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 81/285 (28%), Positives = 133/285 (46%)
Query: 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-IHIKTYKSHGREVRDVHVTAD---- 71
H V RF+ DG + ++ G ++T +++N G + K E +D + TA
Sbjct: 199 HSSVVCCVRFSRDGKF-IATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 72 --------NSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
+ KL++ G D+ I WD+ST R+I+ RGHE ++ ++ F +VS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 123 DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD-------- 172
D+S+R WD R T + S +D V +V ++ I GS+D TVR +D
Sbjct: 318 DRSVRIWDLR---TSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVE 374
Query: 173 -IRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRL--LD-----RSTGELLQEYKG 224
+ G E + V ++ SN+G I + LD T++L L+ +ST E+ Y G
Sbjct: 375 RLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVT--YIG 432
Query: 225 HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
H K F C T + ++ GS+D + FWD + + + H
Sbjct: 433 H--KDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGH 475
Score = 161 (61.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 52/180 (28%), Positives = 83/180 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L+GHE + + F DG+ +S DR++R+W+ R S V V V+ D
Sbjct: 292 ILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL-RTSQCSLTLSIEDGVTTVAVSPDG 350
Query: 73 SKLISCGG-DRQIFYWDVSTGRVIRKF-------RGHESEVNAVKFNEYSSVVVSAGYDQ 124
KLI+ G DR + WD +TG ++ + GHE V +V F+ + S D+
Sbjct: 351 -KLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDR 409
Query: 125 SLRAWDCRSHSTEPIQIIDSF---QDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGREL 179
+++ W S + ++ +D V+SVC T I+ GS D V +D G L
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPL 469
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 36/123 (29%), Positives = 55/123 (44%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK-----TYKSHGREVRDVHVTA 70
GHE +V + F+ +G S DRT++LW+ K TY H V V T
Sbjct: 385 GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTP 444
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVN--AVKFNEYSS--VVVSAGYDQSL 126
DN ++S DR + +WD ++G + +GH + V AV N + + + D
Sbjct: 445 DNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKA 504
Query: 127 RAW 129
R W
Sbjct: 505 RIW 507
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 253 (94.1 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 62/259 (23%), Positives = 114/259 (44%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSK 74
KGH+ AV + F+ D S D T+++W+ T + H V+ V + D+
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRL 319
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L S D + WD +TG + R +GH V +V F+ S ++ S D+++R W+ +
Sbjct: 320 LASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG 379
Query: 135 STEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTFDIRVG--RELSDDLGQPVNCI 190
+ +DSVM+V + S G V+ +D R G + + + VN +
Sbjct: 380 LLR--HTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSV 437
Query: 191 SMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDG 250
S S D + ++ D T+++ +TG L + +GH + ++ + S+D
Sbjct: 438 SFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGH--NDWVRSVVFSHDSRLIASASDDM 495
Query: 251 YIYFWDLVDASVVAKFKAH 269
+ WD + ++H
Sbjct: 496 TVKIWDTATVPLQNNLESH 514
Score = 237 (88.5 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 68/264 (25%), Positives = 118/264 (44%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
T +LKGH +V + F+ D S DRT+R+W G+ T++ H V V
Sbjct: 338 TLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSF 397
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ +L S + WD TG + GH+ VN+V F+ S ++ SA D++++
Sbjct: 398 AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKI 457
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
W + S + + ++ D V SV + I S D TV+ +D L ++L
Sbjct: 458 WHAATGSLQ--RTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATV-PLQNNLESH 514
Query: 187 ---VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHV 243
V + S+D + ++ D T+++ D +TG L +GH + + + D+ +
Sbjct: 515 DNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGH---DDRVNSVSFSPDSRL 571
Query: 244 -TGGSEDGYIYFWDLVDASVVAKF 266
S+DG + W +V F
Sbjct: 572 LASASDDGTVKIWYAATGTVQHTF 595
Score = 230 (86.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 66/263 (25%), Positives = 115/263 (43%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
N L+GH V + F+ D S D T+++W+ G + K H VR V V +
Sbjct: 299 NTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSV-VFSH 357
Query: 72 NSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
+S+LI+ G DR + W+ +TG + F HE V AV F S + SA +++ WD
Sbjct: 358 DSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVG--RELSDDLGQP 186
R+ S + +++ D V SV + + S D TV+ + G + +
Sbjct: 418 TRTGSLQ--NVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDW 475
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
V + S+D I ++ D T+++ D +T L + H ++ ++ +
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESH--DNWVRSVVFSHDSRLLASA 533
Query: 247 SEDGYIYFWDLVDASVVAKFKAH 269
S+D + WD S+ + H
Sbjct: 534 SDDMTVKIWDTATGSLENTLEGH 556
Score = 215 (80.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 62/252 (24%), Positives = 110/252 (43%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ + HE +V+A F D S +++W+ G + H V V + D
Sbjct: 383 HTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPD 442
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+ L S DR + W +TG + R GH V +V F+ S ++ SA D +++ WD
Sbjct: 443 SRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDT 502
Query: 132 RSHSTEPIQI-IDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDL-GQP- 186
+T P+Q ++S + V SV + + S D TV+ +D G L + L G
Sbjct: 503 ---ATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATG-SLENTLEGHDD 558
Query: 187 -VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN +S S D + ++ D T+++ +TG + + G +++ +
Sbjct: 559 RVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGS--GRVAISLAFSHTSNLLAS 616
Query: 246 GSEDGYIYFWDL 257
+DG + WD+
Sbjct: 617 AMDDGTVKIWDM 628
Score = 190 (71.9 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 63/224 (28%), Positives = 98/224 (43%)
Query: 56 YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115
+K H R V V + D+ L S GD + WD +T + GH V +V F+ S
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSR 318
Query: 116 VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDI 173
++ SA D +++ WD + + + +++ DSV SV + I GS D TVR ++
Sbjct: 319 LLASASDDGTVKIWDTATGTLQ--RMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWET 376
Query: 174 RVG--RELSDDLGQPVNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGHI-CK- 228
G R +D V +S ++D LAS D +++ D TG L +GH C
Sbjct: 377 TTGLLRHTFEDHEDSVMAVSFAHDSRR-LASASDGGNVKIWDTRTGSLQNVLEGHDDCVN 435
Query: 229 --SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
SF D L S S+D + W S+ + H+
Sbjct: 436 SVSFSPDSRLLAS------ASDDRTVKIWHAATGSLQRTLEGHN 473
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 43/164 (26%), Positives = 75/164 (45%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+GH V + F+ D S D T+++W+ +SH VR V + D+
Sbjct: 469 LEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSR 528
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L S D + WD +TG + GH+ VN+V F+ S ++ SA D +++ W +
Sbjct: 529 LLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAAT 588
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSV--DGTVRTFDIRV 175
+ + D +S+ + T + S DGTV+ +D+ +
Sbjct: 589 GTVQ--HTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEI 630
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 33/124 (26%), Positives = 56/124 (45%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
N L+ H+ V + F+ D S D T+++W+ G T + H V V + D
Sbjct: 509 NNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPD 568
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+ L S D + W +TG V F G ++ F+ S+++ SA D +++ WD
Sbjct: 569 SRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDM 628
Query: 132 RSHS 135
+S
Sbjct: 629 EIYS 632
Score = 138 (53.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 43/181 (23%), Positives = 79/181 (43%)
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+F+GH+ V +V F+ S ++ SA D +++ WD + + ++ + V SV +
Sbjct: 258 QFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQ--NTLEGHNEWVKSVVFSH 315
Query: 157 TE--IIGGSVDGTVRTFDIRVG--RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLD 212
+ S DGTV+ +D G + + V + S+D I + D T+R+ +
Sbjct: 316 DSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWE 375
Query: 213 RSTGELLQEYKGHICKSFKTDCCLTNSDAH----VTGGSEDGYIYFWDLVDASVVAKFKA 268
+TG L ++ H D + S AH + S+ G + WD S+ +
Sbjct: 376 TTTGLLRHTFEDH------EDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEG 429
Query: 269 H 269
H
Sbjct: 430 H 430
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 243 (90.6 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 68/255 (26%), Positives = 119/255 (46%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P VL+GH G V + F+ + + DRTI++W+ G+ T H +VR +
Sbjct: 159 PWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGL 218
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
V+ ++ + S G D+Q+ WD+ +VIR + GH V + + VV++ G D
Sbjct: 219 AVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVC 278
Query: 127 RAWDCRSHSTEPIQIIDSFQDS-VMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDL 183
R WD R+ +QI DS V SV T+ +I GS D T++ +D+R G+ ++
Sbjct: 279 RVWDIRTK----MQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATIT 334
Query: 184 G--QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA 241
+ V +++ N +++ D+ ++ GE + + +
Sbjct: 335 NHKKTVRAMALHPKENDFVSASADN-IKKFSLPKGEFCHNMLS-LQRDIINAVAVNEDGV 392
Query: 242 HVTGGSEDGYIYFWD 256
VTGG + G ++FWD
Sbjct: 393 MVTGGDKGG-LWFWD 406
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 237 (88.5 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 72/284 (25%), Positives = 126/284 (44%)
Query: 3 VSDLPRTEA-NV----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTY 56
V +PRT N L GH G V A RF+ + S DR+I LWN + +
Sbjct: 46 VQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGIL 105
Query: 57 KSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS- 115
H + D+ + D+ + S D + WD+ +G+ IR++ GHE +N+V+ ++
Sbjct: 106 SGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQE 165
Query: 116 VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDI 173
++VSA D ++ WD R E I +++ + + +V ++ E+ G +D + +DI
Sbjct: 166 MLVSASDDGTMGIWDPRQK--EAIDYLET-ELPITAVAQSEAGNEVFSGGIDNAIHVWDI 222
Query: 174 RVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLD----RSTGELLQEYKGHIC 227
R + G + + +S D +L++ DST+R D T ++ Y G
Sbjct: 223 RKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPV 282
Query: 228 KSFKTDCCLTNSDA--HVTGGSEDGYIYFWDLVDASVVAKFKAH 269
K + + A + GS D + WD ++ K H
Sbjct: 283 GLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGH 326
Score = 140 (54.3 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHRGI--HIKTYKSH--GREVRDVH 67
+ GH + + + D LS D T+R W+ P HI+TY G E +
Sbjct: 231 MAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIR 290
Query: 68 VTAD--NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQ 124
+ + K+ + GDR + WD TG+++ K GH+ VN V+F + ++VSA D+
Sbjct: 291 ASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDR 350
Query: 125 SL 126
+L
Sbjct: 351 NL 352
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 65/272 (23%), Positives = 117/272 (43%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTADN 72
L GH G + A+FN G Y S DR+I LW + + H + D+ + D+
Sbjct: 56 LSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQWSRDS 115
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-SLRAWDC 131
+ S D + WD++TG IR++ GHE +N++ ++ ++ +G D ++ WD
Sbjct: 116 DIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDP 175
Query: 132 RS-HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ--PVN 188
R H+ + I+ F + +++ EI G +D ++ +D+R + + G +
Sbjct: 176 RKKHAADYIE--SDFPVTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTIT 233
Query: 189 CISMSNDGNCILASCLDSTLRLLD----RSTGELLQEYKGH---ICKSFKTDCCLTNSDA 241
+ +S D +L+ +DST R D T ++ + G I K+
Sbjct: 234 TLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGW-DKEGK 292
Query: 242 HVTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
V G+ DG + W + K H V
Sbjct: 293 RVAMGAADGTVVIWSNETGKLTYKLPGHKAAV 324
Score = 169 (64.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 50/226 (22%), Positives = 93/226 (41%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH GA+L +++ D + S D + W+ G I+ Y H + + ++
Sbjct: 98 ILSGHRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRG 157
Query: 73 SKLISCGGDR-QIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+++ G D I WD + V AV +E + + S G D ++ WD
Sbjct: 158 EEILFSGSDDGTIGIWDPRKKHAADYIES-DFPVTAVAISEAGNEIYSGGIDNDIKVWDV 216
Query: 132 RSHSTEPIQIIDSFQDSV--MSVCLTKTEIIGGSVDGTVRTFDIR----VGRELSDDLGQ 185
R + + + +D++ + V ++ ++D T RT+DIR R + G
Sbjct: 217 RKKAV--VYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGA 274
Query: 186 PV----NCI--SMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
P+ N + +G + D T+ + TG+L + GH
Sbjct: 275 PMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGH 320
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 244 (91.0 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 66/225 (29%), Positives = 109/225 (48%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V F + N LSC +D TIRLW+ + TY+ H V DV
Sbjct: 446 LMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGY 505
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+SC D+ W + + +R F GH S+V+ V+F+ S+ V + D+++R WD +
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWD--N 563
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNC 189
+ + ++++ + SV S+ + + GSVD + +D+ G ++ L V
Sbjct: 564 MTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTT 623
Query: 190 ISMSNDGNCILASCLDSTLRLLDRSTGELLQEY-KGHICKSFKTD 233
I+ S DG + A+ LD+ L L D ++ ++Y HI S D
Sbjct: 624 ITFSRDGTVLAAAGLDNNLTLWDFH--KVTEDYISNHITVSHHQD 666
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V GH V +F+ + NY + DRT+RLW+ G ++ H V + +A
Sbjct: 529 VFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACG 588
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
L S D I WD+S G ++ H S V + F+ +V+ +AG D +L WD
Sbjct: 589 RYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 151 (58.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/282 (23%), Positives = 112/282 (39%)
Query: 1 MSVSDLPRTEA-NVLKGHEGAVLAARFNGDGNYCLSCG-KDRTIRLWNPHRGIHIKTYKS 58
+S LP VL H+G V A + D L+CG D ++R+W+ ++T K
Sbjct: 360 LSKDQLPSAVFYTVLNSHQG-VTCAEISDDSTM-LACGFGDSSVRIWSLTPA-KLRTLKD 416
Query: 59 HGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVV 118
+R++ D D + D +G V R GH V F ++++
Sbjct: 417 -ADSLREL----DKES-----ADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLL 466
Query: 119 SAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-----IIGGSVDGTVRTFDI 173
S D ++R W + S + +++ V V + + S D T R +
Sbjct: 467 SCSEDSTIRLWSLLTWSC-----VVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWAT 521
Query: 174 RVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK 231
+ L +G V+C+ + N + D T+RL D TG+ ++ GH K
Sbjct: 522 DSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGH--KGSV 579
Query: 232 TDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
+ + ++ GS D I WDL + S+V H+ V
Sbjct: 580 SSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTV 621
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/222 (22%), Positives = 86/222 (38%)
Query: 39 DRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF 98
D +R+ + G ++ H V + + L+SC D I W + T + +
Sbjct: 429 DINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTY 488
Query: 99 RGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TK 156
RGH V V+F + VS YD++ R W + S + +++ V V
Sbjct: 489 RGHVYPVWDVRFAPHGYYFVSCSYDKTARLW--ATDSNQALRVFVGHLSDVDCVQFHPNS 546
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRS 214
+ GS D TVR +D G+ + G V+ ++ S G + + +D + + D S
Sbjct: 547 NYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLS 606
Query: 215 TGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
G L+ H S T + + D + WD
Sbjct: 607 NGSLVTTLLRHT--STVTTITFSRDGTVLAAAGLDNNLTLWD 646
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 71/249 (28%), Positives = 117/249 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V A D + S DRTI++W+ G T H VR + V+ +
Sbjct: 196 VISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRH 255
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L SC D+ + WD+ T +VIR + GH S V + + V+V+ G D R WD R
Sbjct: 256 PYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMR 315
Query: 133 SHSTEPIQIIDSFQDSVMS-VCL-TKTEIIGGSVDGTVRTFDIRVGRELS--DDLGQPVN 188
+ S I ++ +V VC ++I GS+D TVR +D+ G+ + + V
Sbjct: 316 TRSN--IHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVR 373
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT-GGS 247
++ ++ AS +++ G +Q ++GH T L+ +D +V G+
Sbjct: 374 ALA-THPTEFTFASGSAGSIKQWKCPEGAFMQNFEGHN-SIINT---LSVNDQNVFFSGA 428
Query: 248 EDGYIYFWD 256
++G + FWD
Sbjct: 429 DNGSMSFWD 437
Score = 162 (62.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 55/229 (24%), Positives = 92/229 (40%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNE 112
++ H VR + V DN S GDR I WD+++GR+ GH S V + +
Sbjct: 194 MRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSP 253
Query: 113 YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRT 170
+ S D+ ++ WD ++ I+ V ++ L T ++ G DG R
Sbjct: 254 RHPYLFSCAEDKMVKCWDLETNKV--IRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARV 311
Query: 171 FDIRVGRE---LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHIC 227
+D+R LS G + D I S LDST+R+ D + G+ + H
Sbjct: 312 WDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGS-LDSTVRMWDLAAGKTMGVLTHHK- 369
Query: 228 KSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
K + T+ G I W + + + F+ H+ ++ L
Sbjct: 370 KGVRA--LATHPTEFTFASGSAGSIKQWKCPEGAFMQNFEGHNSIINTL 416
>CGD|CAL0001327 [details] [associations]
symbol:orf19.6347 species:5476 "Candida albicans" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0000348 "mRNA branch site recognition"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0001327 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12816
RefSeq:XP_711565.1 RefSeq:XP_711633.1 ProteinModelPortal:Q59PE6
STRING:Q59PE6 GeneID:3646758 GeneID:3646818 KEGG:cal:CaO19.13703
KEGG:cal:CaO19.6347 Uniprot:Q59PE6
Length = 520
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 72/282 (25%), Positives = 127/282 (45%)
Query: 6 LPRTEANVLKGHEGAVLAARF-NGDGNYCLSCGKDRTIRLW---NPHRGIH---IKTYKS 58
+P+ ++ GH+ + RF G+ LSCG D I+LW N +G ++ +K
Sbjct: 201 VPKRVIHIFPGHKKGINRLRFFPNSGHLLLSCGNDNLIKLWSIYNTFQGKQYQLLRIFKG 260
Query: 59 HGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN--EYSSV 116
H V+D+ + +SCG D+ I WD TG +I+ + +S N + FN ++
Sbjct: 261 HNLPVKDIIFNQSGERFLSCGYDKYIRLWDTKTGEMIKSIK-LKSIPNVLLFNPNNKNNT 319
Query: 117 VVSAGYDQ-SLRAWDCRS-HSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVRTFDI 173
G ++ +D S T PIQI D Q S+ + L + I S D TVR +
Sbjct: 320 EFIVGLSNFTIEHYDFNSIQYTNPIQIYDHHQGSINDLKSLGLDKFISSSDDKTVRIWSW 379
Query: 174 RVG---RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK-----GH 225
++ + ++D + CI + N I +D++++++ S G+ + YK GH
Sbjct: 380 QINIPIKVITDPSQHSIPCIKIHPQANYIALQSMDNSIKVI-HSYGKF-KWYKKKFFTGH 437
Query: 226 ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFK 267
+ + + + G +G+ YFWD ++ K K
Sbjct: 438 QIAGYGIEIDFSPDGKILMSGDCNGFAYFWDWKTCKLIKKLK 479
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 243 (90.6 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 70/259 (27%), Positives = 113/259 (43%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ G + + H DV
Sbjct: 444 ASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQT 503
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
N SC D++I + I+ F+GH +EVNA+K+ ++ S D +L+ W
Sbjct: 504 -NQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWS 562
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++HS E I S + T + S D TVR +D+ G
Sbjct: 563 MNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHT 622
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + TG+L+ YKG + C +
Sbjct: 623 LTKHT-EPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKG---TGGIFEVCWNS 678
Query: 239 SDAHVTGGSEDGYIYFWDL 257
V + DG ++ DL
Sbjct: 679 KGTKVGASASDGSVFVLDL 697
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 60/261 (22%), Positives = 99/261 (37%)
Query: 21 VLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGG 80
V + +N DG+ + D R+W G T H + + + ++S G
Sbjct: 413 VTSLDWNCDGSLLATGSYDGYARIWKTD-GRLASTLGQHKGPIFALKWNKCGNYILSAGV 471
Query: 81 DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ 140
D+ WD STG+ ++F H + V + + + S DQ + CR EPI+
Sbjct: 472 DKTTIIWDASTGQCTQQFAFHSAPALDVDW-QTNQAFASCSTDQRIHV--CRLGVNEPIK 528
Query: 141 IIDSFQDSVMSV--CLTKTEIIGGSVDGTVRTFDIRVGRELSDDL---GQPVNCISMSND 195
+ V ++ C + S D T++ + + R DL + + I S
Sbjct: 529 TFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDR-CCHDLQAHSKEIYTIKWSPT 587
Query: 196 G--------NCILASC-LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
G N ILAS DST+RL D G + H + + H+ G
Sbjct: 588 GPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSV--AFSPDGKHLASG 645
Query: 247 SEDGYIYFWDLVDASVVAKFK 267
S D ++ W +V +K
Sbjct: 646 SFDKCVHIWSTQTGQLVHSYK 666
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 58/239 (24%), Positives = 95/239 (39%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW-------NPHRGIHIKTYK 57
++P ++A VL+GHE V +N + S D T R+W N ++ + +
Sbjct: 342 EIPESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQ 401
Query: 58 SHGREV---RDVHV---TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
G EV +DV D S L + D W GR+ H+ + A+K+N
Sbjct: 402 KGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTD-GRLASTLGQHKGPIFALKWN 460
Query: 112 EYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDS-VMSV-CLTKTEIIGGSVDGTVR 169
+ + ++SAG D++ WD ST +F + + V T S D +
Sbjct: 461 KCGNYILSAGVDKTTIIWDA---STGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIH 517
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ V + G VN I G +LASC D TL++ + + + H
Sbjct: 518 VCRLGVNEPIKTFKGHTNEVNAIKWCPQGQ-LLASCSDDMTLKIWSMNRDRCCHDLQAH 575
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 53/191 (27%), Positives = 78/191 (40%)
Query: 96 RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQII--DSFQDSVMSVC 153
R RGHESEV +N ++ S D + R WD +T Q++ Q V
Sbjct: 349 RVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVP 408
Query: 154 LTK--TEI---------IGGSVDGTVRTFDIRVGRELSDDLGQ---PVNCISMSNDGNCI 199
K T + GS DG R + GR L+ LGQ P+ + + GN I
Sbjct: 409 SNKDVTSLDWNCDGSLLATGSYDGYARIWKTD-GR-LASTLGQHKGPIFALKWNKCGNYI 466
Query: 200 LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259
L++ +D T + D STG+ Q++ H + D + A S D I+ L
Sbjct: 467 LSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASC---STDQRIHVCRLGV 523
Query: 260 ASVVAKFKAHS 270
+ FK H+
Sbjct: 524 NEPIKTFKGHT 534
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 240 (89.5 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 72/280 (25%), Positives = 126/280 (45%)
Query: 6 LPRTEANVLKGHEGAVLAARF-NGDGNYCLSCGKDRTIRLWNPHR-GIHIKTYKSHGREV 63
+P+ + GH V A RF G+ LS G D +++W+ + G ++TY H + V
Sbjct: 270 IPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAV 329
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ + D SK ++ G D+ I YWD TG+VI F + VK N + +++++
Sbjct: 330 RDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPY-VVKLNPDDDKQNILLAG 388
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVG-- 176
D+ + WD ++ E Q D +V ++ + S D ++R ++ +
Sbjct: 389 MSDKKIVQWDI--NTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 446
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ-----EYKGHICKSF 230
+ +S+ + IS+ +GN + A LD+ ++L ST E Q + GHI +
Sbjct: 447 IKYISEPHMHSMPSISVHPNGNWLAAQSLDN--QILIYSTRERFQLNKKKRFAGHIVAGY 504
Query: 231 KTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ V G +G +FWD V K H+
Sbjct: 505 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHN 544
Score = 159 (61.0 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 63/255 (24%), Positives = 112/255 (43%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSK- 74
GH AV F+ DG+ L+ G D+ I+ W+ G I T+ S G+ V + D+ K
Sbjct: 324 GHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTF-STGKIPYVVKLNPDDDKQ 382
Query: 75 -LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
++ G D++I WD++TG V +++ H VN + F + + V++ D+SLR W+
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 442
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDD---LGQPV 187
I + S+ S+ + + S+D + + R +L+ G V
Sbjct: 443 IPVVIKY-ISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 501
Query: 188 N---C-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSDA 241
C ++ S DG +++ + D + ++ + K H +C + L S
Sbjct: 502 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHP-LEQSKV 560
Query: 242 HVTGGSEDGYIYFWD 256
G DG I +WD
Sbjct: 561 ATCGW--DGLIKYWD 573
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 239 (89.2 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 72/259 (27%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ H G + + H DV
Sbjct: 269 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD-WQ 327
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SCG D I + ++ F+GH +EVNA+K++ ++ S D +L+ W
Sbjct: 328 NNTTFASCGTDMCIHVCRLGCDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 387
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++HS E I S S + + S D TVR +D+ G
Sbjct: 388 MKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHT 447
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV I+ S DG + + D + + + +G L+ Y+G F+ C
Sbjct: 448 LTKHQ-EPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQG-TGGIFEV-CWNAR 504
Query: 239 SDAHVTGGSEDGYIYFWDL 257
D V + DG + DL
Sbjct: 505 GDK-VGASASDGSVCVLDL 522
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 61/241 (25%), Positives = 95/241 (39%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR---GIHIKTYKSHG- 60
++P +A VL+GHE V +N + S D T R+WN + G + H
Sbjct: 166 EIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 225
Query: 61 REV-RDVHVTAD------NSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
RE DV D NS L++ G D W G + H+ + A+K+
Sbjct: 226 REGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKGPIFALKW 284
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V T D +
Sbjct: 285 NKKGNYILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQNNTTFASCGTDMCIH 342
Query: 170 TFDIRVGRELSDDLGQ----PVNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKG 224
R+G +L Q VN I G +LASC D TL++ + + +
Sbjct: 343 V--CRLGCDLPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQDACVHDLQA 399
Query: 225 H 225
H
Sbjct: 400 H 400
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 239 (89.2 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 71/259 (27%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ H G + + H DV
Sbjct: 272 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD-WQ 330
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R ++ F+GH +EVNA+K++ ++ S D +L+ W
Sbjct: 331 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 390
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++HS E I S S + + S D TVR +D+ G
Sbjct: 391 MKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHT 450
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + +G L+ Y+G F+ C
Sbjct: 451 LTKHQ-EPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEV-CWNAR 507
Query: 239 SDAHVTGGSEDGYIYFWDL 257
D V + DG + DL
Sbjct: 508 GDK-VGASASDGSVCVLDL 525
Score = 132 (51.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 59/239 (24%), Positives = 96/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR---GIHIKTYKSH-- 59
++P ++A VL+GHE V +N + S D T R+WN + G + H
Sbjct: 169 EIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 228
Query: 60 ---GREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
G +V +DV NS L++ G D W G + H+ + A+K+
Sbjct: 229 REGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKW 287
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V T S D +
Sbjct: 288 NKKGNYILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 345
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I G +LASC D TL++ + + + H
Sbjct: 346 VCRLGCDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQDACVHDLQAH 403
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 32/110 (29%), Positives = 49/110 (44%)
Query: 24 ARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDR 82
A N + N L S D T+RLW+ RG+ I T H V V + D L S D+
Sbjct: 418 ATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDK 477
Query: 83 QIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+ W+ +G ++ +RG + V +N V ++ D S+ D R
Sbjct: 478 CVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLR 526
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 239 (89.2 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 71/259 (27%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ H G + + H DV
Sbjct: 272 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD-WQ 330
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R ++ F+GH +EVNA+K++ ++ S D +L+ W
Sbjct: 331 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 390
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++HS E I S S + + S D TVR +D+ G
Sbjct: 391 MKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHT 450
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + +G L+ Y+G F+ C
Sbjct: 451 LTKHQ-EPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEV-CWNAR 507
Query: 239 SDAHVTGGSEDGYIYFWDL 257
D V + DG + DL
Sbjct: 508 GDK-VGASASDGSVCVLDL 525
Score = 132 (51.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 59/239 (24%), Positives = 96/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR---GIHIKTYKSH-- 59
++P ++A VL+GHE V +N + S D T R+WN + G + H
Sbjct: 169 EIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 228
Query: 60 ---GREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
G +V +DV NS L++ G D W G + H+ + A+K+
Sbjct: 229 REGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKW 287
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V T S D +
Sbjct: 288 NKKGNYILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 345
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I G +LASC D TL++ + + + H
Sbjct: 346 VCRLGCDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQDACVHDLQAH 403
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 32/110 (29%), Positives = 49/110 (44%)
Query: 24 ARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDR 82
A N + N L S D T+RLW+ RG+ I T H V V + D L S D+
Sbjct: 418 ATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDK 477
Query: 83 QIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+ W+ +G ++ +RG + V +N V ++ D S+ D R
Sbjct: 478 CVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLR 526
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 239 (89.2 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 71/258 (27%), Positives = 115/258 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ H G + + H DV
Sbjct: 273 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD-WQ 331
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R ++ F+GH +EVNA+K++ ++ S D +L+ W
Sbjct: 332 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 391
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
D ++HS E I S S + + S D TVR +D+ G L
Sbjct: 392 MKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHT 451
Query: 182 --DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
+PV ++ S DG + + D + + + +G L+ Y+G F+ C
Sbjct: 452 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEV-CWNARG 509
Query: 240 DAHVTGGSEDGYIYFWDL 257
D V + DG + DL
Sbjct: 510 DK-VGASASDGSVCVLDL 526
Score = 132 (51.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 59/239 (24%), Positives = 96/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR---GIHIKTYKSH-- 59
++P ++A VL+GHE V +N + S D T R+WN + G + H
Sbjct: 170 EIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 229
Query: 60 ---GREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
G +V +DV NS L++ G D W G + H+ + A+K+
Sbjct: 230 REGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKW 288
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V T S D +
Sbjct: 289 NKKGNYILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 346
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I G +LASC D TL++ + + + H
Sbjct: 347 VCRLGCDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQDTCVHDLQAH 404
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 241 (89.9 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 60/208 (28%), Positives = 99/208 (47%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
+E+ +L GH G V F+ D NY LS +D TIRLW+ + YK H V D
Sbjct: 490 SESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQF 549
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ +S G DR W + +R F GH ++V +F+ S+ V + D+++R
Sbjct: 550 SPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRL 609
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
WD + + ++I + + S+ + + GS DG V +DI G +++ G
Sbjct: 610 WDVLNGNC--VRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHT 667
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD 212
+ + S DG I + +D+T+RL D
Sbjct: 668 GTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 171 (65.3 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA--DN 72
KGH V +F+ G Y +S G DR RLW ++ + H + DV T N
Sbjct: 538 KGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGH---LADVTCTRFHPN 594
Query: 73 SKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
S ++ G DR + WDV G +R F GH+ ++++ F+ + S D + WD
Sbjct: 595 SNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKT-EIIG-GSVDGTVRTFDI 173
H I + ++ ++ ++ EII GS+D TVR +D+
Sbjct: 655 -GHGLM-IAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 162 (62.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 53/214 (24%), Positives = 90/214 (42%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
K H V V + D + L+S D I W + T + ++GH V +F+ +
Sbjct: 493 KILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPF 552
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-----IIGGSVDGTV 168
VS G+D+ R W H +P++I F + V T+ + GS D TV
Sbjct: 553 GYYFVSGGHDRVARLW-ATDHY-QPLRI---FAGHLADVTCTRFHPNSNYVATGSSDRTV 607
Query: 169 RTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D+ G + G P++ ++ S +G + + D + L D G ++ E KGH
Sbjct: 608 RLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHT 667
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260
+ + + GS D + WD++ A
Sbjct: 668 GTIYALK--FSRDGEIIASGSIDNTVRLWDVMRA 699
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 241 (89.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 57/211 (27%), Positives = 101/211 (47%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P+ L GH G V F+ D Y LSC +D+T+RLW+ + +YK H + V DV
Sbjct: 506 PQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDV 565
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+ ++ D+ W +R F GH ++V+ V+F+ S+ V + D++
Sbjct: 566 KFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTC 625
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLG 184
R WD H+ +++ +SV + ++ + G DG + +DI GR L G
Sbjct: 626 RMWDV--HTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRG 683
Query: 185 QP---VNCISMSNDGNCILASCLDSTLRLLD 212
+ ++ S DG +++ C D+++R+ D
Sbjct: 684 HARASLYSLAFSRDGTVLVSGCADNSVRVWD 714
Score = 198 (74.8 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 65/250 (26%), Positives = 105/250 (42%)
Query: 26 FNGDGNYCLSCGKDRTIRLWN----PHRGI-----HI---KTYK--SHGREVRDVHVTAD 71
FN D + +D I+LW+ P + + H T K H V V + D
Sbjct: 469 FNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPD 528
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
N L+SC D+ + W + T + ++GH V VKF+ V+A +DQ+ R W
Sbjct: 529 NKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLW-A 587
Query: 132 RSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
H P++I + V V + GS D T R +D+ G + LG V
Sbjct: 588 TDH-IYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSV 646
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
NC+++S DG + + D + + D +G L+ +GH S + + + G
Sbjct: 647 NCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYS-LAFSRDGTVLVSGC 705
Query: 248 EDGYIYFWDL 257
D + WD+
Sbjct: 706 ADNSVRVWDV 715
Score = 189 (71.6 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 39/138 (28%), Positives = 71/138 (51%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+ GH V F+ + NY + D+T R+W+ H G ++ + H V + V+ D
Sbjct: 596 IFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDG 655
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGH-ESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L S G D I WD+ +GR ++ RGH + + ++ F+ +V+VS D S+R WD
Sbjct: 656 RWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Query: 132 RSHSTEPIQIIDSFQDSV 149
+ ++ + ++F ++V
Sbjct: 716 KKNTNDAGPEPEAFNNNV 733
Score = 170 (64.9 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 45/185 (24%), Positives = 84/185 (45%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSK 74
KGH V +F+ G+Y ++ D+T RLW ++ + H +V V +++
Sbjct: 556 KGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNY 615
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
+ + D+ WDV TG +R F GH + VN + + + S G D + WD S
Sbjct: 616 VFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGS- 674
Query: 135 STEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+ + S+ S+ ++ T ++ G D +VR +D++ ++D G +
Sbjct: 675 GRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKN---TNDAGPEPEAFNN 731
Query: 193 SNDGN 197
+ +GN
Sbjct: 732 NVNGN 736
Score = 125 (49.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 43/184 (23%), Positives = 75/184 (40%)
Query: 96 RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT 155
RK GH V V F+ + ++S D+++R W +++ + S++ V
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTA-----LVSYKGHTQPVWDV 565
Query: 156 KTEIIG-----GSVDGTVR---TFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDST 207
K +G S D T R T I R + + V+C+ + N + D T
Sbjct: 566 KFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHIND-VDCVEFHPNSNYVFTGSSDKT 624
Query: 208 LRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH-VTGGSEDGYIYFWDLVDASVVAKF 266
R+ D TG ++ + GH + +C + D + G EDG I WD+ +
Sbjct: 625 CRMWDVHTGNCVRVFLGH---TNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSM 681
Query: 267 KAHS 270
+ H+
Sbjct: 682 RGHA 685
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 238 (88.8 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 70/280 (25%), Positives = 126/280 (45%)
Query: 6 LPRTEANVLKGHEGAVLAAR-FNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
LP+ + +V GH V A R F G+ LSC D I+LW + ++T+ HG+ V
Sbjct: 277 LPKKQIHVWSGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAV 336
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ ++ +S DR I WD TG+ I +F + VKFN + ++ V+
Sbjct: 337 RDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAG 395
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTF--DIRVG 176
D+ + WD RS E +Q D +V ++ + S D ++R + DI V
Sbjct: 396 MSDKKIVQWDIRSG--EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVD 453
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE---YKGHICKSFKT 232
+ +++ + +++S +G + +D+ + + L + +KGH+ +
Sbjct: 454 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 513
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ ++V G DG + WD + ++ KAH V
Sbjct: 514 QVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKV 553
Score = 150 (57.9 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 66/256 (25%), Positives = 107/256 (41%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-VHVTADNSK 74
GH AV FN G LS DR I+LW+ G I + + R+V V D K
Sbjct: 331 GHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTN--RKVPYCVKFNPDEDK 388
Query: 75 --LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L G D++I WD+ +G +++++ H VN + F + + VS D+SLR W+
Sbjct: 389 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 448
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD----IRVGRE--LSDDL 183
+ I + S+ +V L+ + S+D + F R+ ++ +
Sbjct: 449 -DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHM 507
Query: 184 GQPVNC-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSD 240
C + S D + +++ D L + D T +L K H +C T+
Sbjct: 508 VAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETSKV 567
Query: 241 AHVTGGSEDGYIYFWD 256
+T G DG I WD
Sbjct: 568 --ITCGW-DGLIKLWD 580
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 236 (88.1 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 69/248 (27%), Positives = 112/248 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V GH G V A + S G DR I++W+ G + H VR V V+ +
Sbjct: 179 VASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRH 238
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L S G D+Q+ WD+ +VIR + GH S V A+ + V+V+ D + R WD R
Sbjct: 239 PFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMR 298
Query: 133 SHSTEPIQIIDSFQDSVMSV-CLT-KTEIIGGSVDGTVRTFDIRVGRELSD--DLGQPVN 188
+ + + ++V V C + ++I S D TVR +D+ GR + + V
Sbjct: 299 TKAQ--VHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVR 356
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
+++ N + AS ++ GE +Q GH + + +N D V G++
Sbjct: 357 ALTIHPRLN-MFASASPDNIKQWKLPKGEFMQNLSGH---NAIINTLSSNDDGVVVSGAD 412
Query: 249 DGYIYFWD 256
+G + FWD
Sbjct: 413 NGSLCFWD 420
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 46/175 (26%), Positives = 73/175 (41%)
Query: 8 RTEANV--LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
RT+A V GH V ++ D T+RLW+ G + T H + VR
Sbjct: 298 RTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRA 357
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
+ + + S D I W + G ++ GH + +N + N+ VVVS + S
Sbjct: 358 LTIHPRLNMFASASPDN-IKQWKLPKGEFMQNLSGHNAIINTLSSND-DGVVVSGADNGS 415
Query: 126 LRAWDCRSH------STEPIQ-IIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTF 171
L WD RS T+P I+S + + + C KT +I D T++ +
Sbjct: 416 LCFWDWRSGFCFQKIQTKPQPGSIES-EAGIYASCFDKTGLRLITAEADKTIKMY 469
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 237 (88.5 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 71/259 (27%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ H G + + H DV
Sbjct: 322 ASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD-WQ 380
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R ++ F+GH +EVNA+K++ ++ S D +L+ W
Sbjct: 381 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 440
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++H+ E I S S + + S D TVR +DI G
Sbjct: 441 MKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHT 500
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + +G L+ Y+G F+ C
Sbjct: 501 LTKHQ-EPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEV-CWNAR 557
Query: 239 SDAHVTGGSEDGYIYFWDL 257
D V + DG + DL
Sbjct: 558 GDK-VGASASDGSVCVLDL 575
Score = 133 (51.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 59/240 (24%), Positives = 96/240 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR---GIHIKTYKSH-- 59
++P ++A VL+GHE V +N + S D T R+WN + G + H
Sbjct: 219 EIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 278
Query: 60 ---GREV---RDVHVTAD---NSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVK 109
G +V +DV + D N L++ G D W G + H+ + A+K
Sbjct: 279 REGGHDVPSNKDV-TSLDWNTNGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALK 336
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTV 168
+N + ++SAG D++ WD +H+ E Q + V T S D +
Sbjct: 337 WNRKGNYILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCI 394
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I G +LASC D TL++ + + + H
Sbjct: 395 HVCRLGCDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQEVCIHDLQAH 453
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 235 (87.8 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 60/208 (28%), Positives = 99/208 (47%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
+E +L GH G V A F+ D NY LS +D T+RLW+ + YK H V D
Sbjct: 294 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 353
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ +S G DR W + +R F GH ++VN +F+ S+ V + D+++R
Sbjct: 354 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 413
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
WD + + ++I + + S+ + + G+ DG V +DI G + + G
Sbjct: 414 WDVLNGNC--VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 471
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD 212
S+ S DG + + +D+T+RL D
Sbjct: 472 DTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 172 (65.6 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 57/224 (25%), Positives = 90/224 (40%)
Query: 43 RLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHE 102
R+ + +K H V + D + L+S D + W + T + ++GH
Sbjct: 286 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 345
Query: 103 SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEII 160
V +F+ Y VS G+D+ R W H +P++I V +
Sbjct: 346 YPVWDTQFSPYGYYFVSGGHDRVARLW-ATDHY-QPLRIFAGHLADVNCTRFHPNSNYVA 403
Query: 161 GGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218
GS D TVR +D+ G + G P++ ++ S +G + D + L D G +
Sbjct: 404 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 463
Query: 219 LQEYKGHICKSFKTDCCLTNS-DAHV-TGGSEDGYIYFWDLVDA 260
+ E KGH T C L S D + GS D + WD V A
Sbjct: 464 VGELKGHT----DTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 503
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 228 (85.3 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 70/258 (27%), Positives = 122/258 (47%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPH-RGIHIKTYKSHGREVRDVHVTADN 72
L GH+G + + +FN G S G D+ I LWN + I+ K H + ++H + D+
Sbjct: 58 LIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDS 117
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAV-KFNEYSSVVVSAGYDQSLRAWDC 131
+++ + D+ I WD + G +I++ R H VN+ +V S D+S R +D
Sbjct: 118 NEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDT 177
Query: 132 RSH-STEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQPVN 188
RS ST Q + V SVC + ++I G +D +R +DIR + L +
Sbjct: 178 RSKGSTHLFQ----HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQD 233
Query: 189 CI---SMSNDGNCILASCLDSTLRLLD----RSTGELLQEYKGHICKSFKTDCCLTN--S 239
I S+S DG +L++ +D++ ++ D ++ + G +F+ + ++
Sbjct: 234 TITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNG-AQNNFEKNLIKSSWSI 292
Query: 240 DAHVTG-GSEDGYIYFWD 256
D G GS D +Y WD
Sbjct: 293 DGRRIGCGSSDRQVYIWD 310
Score = 194 (73.4 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 60/227 (26%), Positives = 105/227 (46%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+VLKGH+G +L ++ D N + D++I +W+ ++G IK + H V
Sbjct: 99 SVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARR 158
Query: 72 NSKLISCGGD-RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
L++ G D R +D + F+ H+ V +V F++ S +++ G D +R WD
Sbjct: 159 GPPLVASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTSVCFSDASDQLITGGIDNVIRVWD 217
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRV----GRELSDDLG 184
R+ +P+ + S QD++ S ++K ++ S+D + + +DIR R + G
Sbjct: 218 IRNQE-DPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNG 276
Query: 185 QP----VNCI--SMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
N I S S DG I D + + D +T +L GH
Sbjct: 277 AQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGH 323
Score = 129 (50.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 48/196 (24%), Positives = 88/196 (44%)
Query: 74 KLISCGGDRQIFYWDVSTGRV---IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
+++S GG R+I T ++ I + GH+ E+ + KFN Y + + S G D+ + W+
Sbjct: 31 QVVSSGGGREIILGTERTSKLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWN 90
Query: 131 CRSHSTEPIQIIDSFQDSVMSV--CLTKTEIIGGSVDGTVRTFDIRVG---RELSDDLGQ 185
++ + +++ + EI D ++ +D G + + + G
Sbjct: 91 VYGECIN-YSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGV 149
Query: 186 PVNCISMSNDGNCILASCLDS-TLRLLD-RSTGEL-LQEYKGHICKSFKTDCCLTN-SDA 241
VN + G ++AS D + R+ D RS G L ++K + T C ++ SD
Sbjct: 150 -VNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYPV-----TSVCFSDASDQ 203
Query: 242 HVTGGSEDGYIYFWDL 257
+TGG D I WD+
Sbjct: 204 LITGGI-DNVIRVWDI 218
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/121 (24%), Positives = 56/121 (46%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHR--GIHIKTYKSHGREVRDVHVT 69
L H+ + + + DG Y LS D + ++W+ P+ +IKT+ +
Sbjct: 228 LASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIK 287
Query: 70 AD---NSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
+ + + I CG DRQ++ WD +T ++ GH VN V F+ ++ S D++
Sbjct: 288 SSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKT 347
Query: 126 L 126
+
Sbjct: 348 I 348
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 235 (87.8 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 71/259 (27%), Positives = 115/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ H G + + H DV
Sbjct: 314 ASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD-WQ 372
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N SC D I + R ++ F+GH +EVNA+K++ ++ S D +L+ W
Sbjct: 373 NNMTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 432
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++H+ E I S S + + S D TVR +DI G
Sbjct: 433 MKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHT 492
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + +G L+ Y+G F+ C
Sbjct: 493 LTKHQ-EPVYSVAFSPDGRYLASGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEV-CWNAR 549
Query: 239 SDAHVTGGSEDGYIYFWDL 257
D V + DG + DL
Sbjct: 550 GDK-VGASASDGSVCVLDL 567
Score = 132 (51.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 59/240 (24%), Positives = 95/240 (39%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR---GIHIKTYKSH-- 59
D+P ++A VL+GHE V +N + S D T R+WN + G + H
Sbjct: 211 DIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 270
Query: 60 ---GREV---RDVHVTAD---NSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVK 109
G +V +DV + D N L++ G D W G + H+ + A+K
Sbjct: 271 REGGHDVPSNKDV-TSLDWNTNGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALK 328
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGG-SVDGTV 168
+N + ++SAG D++ WD +H+ E Q + V S D +
Sbjct: 329 WNRKGNYILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCI 386
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I G +LASC D TL++ + + + H
Sbjct: 387 HVCRLGCDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQEVCIHDLQAH 445
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 234 (87.4 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 69/259 (26%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GN+ LS G D+T +W+ H G + + H DV +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQS 318
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R I+ F+GH +EVNA+K++ +++ S D +L+ W
Sbjct: 319 NNT-FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS 377
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++H+ E I S S + S D TVR +D+ G
Sbjct: 378 MKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHT 437
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + TG L+ Y+G + C
Sbjct: 438 LTKHQ-EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG---TGGIFEVCWNA 493
Query: 239 SDAHVTGGSEDGYIYFWDL 257
+ V + DG + DL
Sbjct: 494 AGDKVGASASDGSVCVLDL 512
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 57/239 (23%), Positives = 98/239 (41%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-------IHIK-TY 56
++P +A VL+GHE V +N + S D T R+WN + ++
Sbjct: 156 EIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCI 215
Query: 57 KSHGREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
+ G++V +DV NS+ L++ G D W G + H+ + A+K+
Sbjct: 216 REGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKW 274
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGG-SVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q+ + V S D +
Sbjct: 275 NKKGNFILSAGVDKTTIIWD--AHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I GN +LASC D TL++ + + + H
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNCVHDLQAH 390
Score = 126 (49.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 60/231 (25%), Positives = 98/231 (42%)
Query: 58 SHGREVRDVHVTADN-SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116
++G E H A+N + ++ GD +I + + RGHESEV +N S +
Sbjct: 131 ANGEE-NGAHTIANNHTDMMEVDGDVEI-----PPNKAV-VLRGHESEVFICAWNPVSDL 183
Query: 117 VVSAGYDQSLRAWDCRSHSTE-PIQII------DSFQDSVMSVCLTK-------TEIIGG 162
+ S D + R W+ +ST Q++ + QD + +T T + G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 163 SVDGTVRTFDIRVGRELSDDLGQ---PVNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
S DG R + + G L+ LGQ P+ + + GN IL++ +D T + D TGE
Sbjct: 244 SYDGFARIWT-KDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK 301
Query: 220 QEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
Q + H + D N+ A S D I+ L + F+ H+
Sbjct: 302 QLFPFHSAPALDVDWQSNNTFASC---STDMCIHVCKLGQDRPIKTFQGHT 349
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 33/107 (30%), Positives = 48/107 (44%)
Query: 27 NGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIF 85
N + N L S D T+RLW+ RGI I T H V V + D L S D+ +
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 86 YWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
W+ TG ++ +RG + V +N V ++ D S+ D R
Sbjct: 468 IWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 233 (87.1 bits), Expect = 9.3e-19, P = 9.3e-19
Identities = 71/259 (27%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ H G + + H DV
Sbjct: 268 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD-WQ 326
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R ++ F+GH +EVNA+K++ ++ S D +L+ W
Sbjct: 327 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 386
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++HS E I S S + + S D TVR +D+ G
Sbjct: 387 MKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHT 446
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + +G L+ Y+G F+ C
Sbjct: 447 LTKHQ-EPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRG-TGGIFEV-CWNAR 503
Query: 239 SDAHVTGGSEDGYIYFWDL 257
D V + DG + DL
Sbjct: 504 GDK-VGASASDGSVCVLDL 521
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 58/239 (24%), Positives = 96/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK---SH-- 59
++P +A VL+GHE V +N + S D T R+WN + + + + H
Sbjct: 165 EIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCI 224
Query: 60 ---GREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
G +V +DV NS L++ G D W G + H+ + A+K+
Sbjct: 225 REGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TEDGNLASTLGQHKGPIFALKW 283
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V T S D +
Sbjct: 284 NKKGNYILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 341
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I G +LASC D TL++ + + + H
Sbjct: 342 VCRLGCDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQDTCVHDLQAH 399
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 234 (87.4 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 72/256 (28%), Positives = 123/256 (48%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V ++ + G Y +S DRT+++W+ G + T + H VR + + S
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG--S 349
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L++ D + WDV +GR + GH + V V+F+ + VVS GYD +++ W+ +
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWN--A 405
Query: 134 HSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTFDIR--VGRELSDDLGQPVNC 189
H+ I+ + + V S+ ++ + GS+D ++R +D G+E L +
Sbjct: 406 HTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL 465
Query: 190 IS-MSNDGNCILASC-LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
S M GN IL SC DS +R+ D G + GH +S T + T S
Sbjct: 466 TSGMQLRGN-ILVSCNADSHVRVWDIHEGTCVHMLSGH--RSAITSLQWFGRNMVATS-S 521
Query: 248 EDGYIYFWDLVDASVV 263
+DG + WD+ +++
Sbjct: 522 DDGTVKLWDIERGALI 537
Score = 211 (79.3 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 58/212 (27%), Positives = 94/212 (44%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L+GH V G + ++ +D T+R+W+ G H+ T H VR V D
Sbjct: 332 HTLQGHTSTVRCMAMAG--SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--D 387
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD- 130
+ ++S G D + W+ TGR IR GH + V ++ F S+V S D S+R WD
Sbjct: 388 GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF 447
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCI 190
R E + ++ + L ++ + D VR +DI G + G
Sbjct: 448 TRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAIT 507
Query: 191 SMSNDG-NCILASCLDSTLRLLDRSTGELLQE 221
S+ G N + S D T++L D G L+++
Sbjct: 508 SLQWFGRNMVATSSDDGTVKLWDIERGALIRD 539
Score = 186 (70.5 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 55/201 (27%), Positives = 91/201 (45%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV +F DG +S G D T+++WN H G I+T H V + ++ S
Sbjct: 374 LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERS 431
Query: 74 KLISCGG--DRQIFYWDVST--GR-VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
I C G D I WD + G+ + +GH S + ++ +++VS D +R
Sbjct: 432 --IVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRV 487
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPV 187
WD H + ++ + ++ S+ + + S DGTV+ +DI G + D +
Sbjct: 488 WDI--HEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRD-----L 540
Query: 188 NCISMSNDGNCILASCLDSTL 208
+ +G CI C ST+
Sbjct: 541 VTLDSGGNGGCIWRLCSTSTM 561
Score = 170 (64.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 60/269 (22%), Positives = 114/269 (42%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL+GHE V+ D + ++ D T+++W +G + T H V ++
Sbjct: 250 VLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCG 308
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
++S DR + W G ++ +GH S V + S++V+ D +LR WD
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVE 366
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
S + + +V V T ++ G D TV+ ++ GR + G S+
Sbjct: 367 SG--RHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSL 424
Query: 193 --SNDGNCILASCLDSTLRLLD--RSTG-ELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
++ + + + LD+++R+ D R G E + +GH S + L + + +
Sbjct: 425 LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHT--SLTSGMQLRGNI--LVSCN 480
Query: 248 EDGYIYFWDLVDASVVAKFKAH-SLVVKL 275
D ++ WD+ + + V H S + L
Sbjct: 481 ADSHVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 153 (58.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 48/223 (21%), Positives = 95/223 (42%)
Query: 39 DRTIRLWN--PHRGIHI-KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVI 95
D+ + WN P G + + ++ H +H + L++ D + W + G V+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIH----DDVLVTGSDDNTLKVWCIDKGEVM 289
Query: 96 RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT 155
GH V + ++ +VS D++++ W S + + +V + +
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSL--LHTLQGHTSTVRCMAMA 347
Query: 156 KTEIIGGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDR 213
+ ++ GS D T+R +D+ GR L+ G V C+ DG +++ D T+++ +
Sbjct: 348 GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNA 405
Query: 214 STGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
TG ++ GH + + + + V GS D I WD
Sbjct: 406 HTGRCIRTLTGHNNRVYSL--LFESERSIVCSGSLDTSIRVWD 446
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 234 (87.4 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 72/256 (28%), Positives = 123/256 (48%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V ++ + G Y +S DRT+++W+ G + T + H VR + + S
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG--S 349
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L++ D + WDV +GR + GH + V V+F+ + VVS GYD +++ W+ +
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWN--A 405
Query: 134 HSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTFDIR--VGRELSDDLGQPVNC 189
H+ I+ + + V S+ ++ + GS+D ++R +D G+E L +
Sbjct: 406 HTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL 465
Query: 190 IS-MSNDGNCILASC-LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
S M GN IL SC DS +R+ D G + GH +S T + T S
Sbjct: 466 TSGMQLRGN-ILVSCNADSHVRVWDIHEGTCVHMLSGH--RSAITSLQWFGRNMVATS-S 521
Query: 248 EDGYIYFWDLVDASVV 263
+DG + WD+ +++
Sbjct: 522 DDGTVKLWDIERGALI 537
Score = 211 (79.3 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 58/212 (27%), Positives = 94/212 (44%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L+GH V G + ++ +D T+R+W+ G H+ T H VR V D
Sbjct: 332 HTLQGHTSTVRCMAMAG--SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--D 387
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD- 130
+ ++S G D + W+ TGR IR GH + V ++ F S+V S D S+R WD
Sbjct: 388 GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF 447
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCI 190
R E + ++ + L ++ + D VR +DI G + G
Sbjct: 448 TRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAIT 507
Query: 191 SMSNDG-NCILASCLDSTLRLLDRSTGELLQE 221
S+ G N + S D T++L D G L+++
Sbjct: 508 SLQWFGRNMVATSSDDGTVKLWDIERGALIRD 539
Score = 186 (70.5 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 55/201 (27%), Positives = 91/201 (45%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH AV +F DG +S G D T+++WN H G I+T H V + ++ S
Sbjct: 374 LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERS 431
Query: 74 KLISCGG--DRQIFYWDVST--GR-VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
I C G D I WD + G+ + +GH S + ++ +++VS D +R
Sbjct: 432 --IVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRV 487
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPV 187
WD H + ++ + ++ S+ + + S DGTV+ +DI G + D +
Sbjct: 488 WDI--HEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRD-----L 540
Query: 188 NCISMSNDGNCILASCLDSTL 208
+ +G CI C ST+
Sbjct: 541 VTLDSGGNGGCIWRLCSTSTM 561
Score = 170 (64.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 60/269 (22%), Positives = 114/269 (42%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL+GHE V+ D + ++ D T+++W +G + T H V ++
Sbjct: 250 VLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCG 308
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
++S DR + W G ++ +GH S V + S++V+ D +LR WD
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVE 366
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
S + + +V V T ++ G D TV+ ++ GR + G S+
Sbjct: 367 SG--RHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSL 424
Query: 193 --SNDGNCILASCLDSTLRLLD--RSTG-ELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
++ + + + LD+++R+ D R G E + +GH S + L + + +
Sbjct: 425 LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHT--SLTSGMQLRGNI--LVSCN 480
Query: 248 EDGYIYFWDLVDASVVAKFKAH-SLVVKL 275
D ++ WD+ + + V H S + L
Sbjct: 481 ADSHVRVWDIHEGTCVHMLSGHRSAITSL 509
Score = 153 (58.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 48/223 (21%), Positives = 95/223 (42%)
Query: 39 DRTIRLWN--PHRGIHI-KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVI 95
D+ + WN P G + + ++ H +H + L++ D + W + G V+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIH----DDVLVTGSDDNTLKVWCIDKGEVM 289
Query: 96 RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT 155
GH V + ++ +VS D++++ W S + + +V + +
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSL--LHTLQGHTSTVRCMAMA 347
Query: 156 KTEIIGGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDR 213
+ ++ GS D T+R +D+ GR L+ G V C+ DG +++ D T+++ +
Sbjct: 348 GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNA 405
Query: 214 STGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
TG ++ GH + + + + V GS D I WD
Sbjct: 406 HTGRCIRTLTGHNNRVYSL--LFESERSIVCSGSLDTSIRVWD 446
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 231 (86.4 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 68/280 (24%), Positives = 126/280 (45%)
Query: 6 LPRTEANVLKGHEGAVLAAR-FNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
LP+ + +V GH V A R F G+ LSC D I+LW + ++T+ H + V
Sbjct: 141 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAV 200
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ ++ +S DR + WD TG+ I +F + VKFN + ++ V+
Sbjct: 201 RDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAG 259
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTF--DIRVG 176
D+ + WD RS E +Q D +V ++ + S D ++R + DI V
Sbjct: 260 MSDKKIVQWDIRSG--EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVD 317
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE---YKGHICKSFKT 232
+ +++ + +++S +G + +D+ + + L + +KGH+ +
Sbjct: 318 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 377
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ ++V G +G + WD + ++FKAH V
Sbjct: 378 QVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKV 417
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 64/256 (25%), Positives = 108/256 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-VHVTADNSK 74
GH AV FN G LS DR ++LW+ G I + + R+V V D K
Sbjct: 195 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN--RKVPYCVKFNPDEDK 252
Query: 75 --LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L G D++I WD+ +G +++++ H VN + F + + VS D+SLR W+
Sbjct: 253 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 312
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD----IRVGRE--LSDDL 183
+ I + S+ +V L+ + S+D + F R+ ++ +
Sbjct: 313 -DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHM 371
Query: 184 GQPVNC-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSD 240
C + S D + +++ + L + D T +L +K H +C T+
Sbjct: 372 VAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKV 431
Query: 241 AHVTGGSEDGYIYFWD 256
+T G DG I WD
Sbjct: 432 --ITCGW-DGLIKLWD 444
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 231 (86.4 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 68/280 (24%), Positives = 126/280 (45%)
Query: 6 LPRTEANVLKGHEGAVLAAR-FNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
LP+ + +V GH V A R F G+ LSC D I+LW + ++T+ H + V
Sbjct: 144 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAV 203
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ ++ +S DR + WD TG+ I +F + VKFN + ++ V+
Sbjct: 204 RDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAG 262
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTF--DIRVG 176
D+ + WD RS E +Q D +V ++ + S D ++R + DI V
Sbjct: 263 MSDKKIVQWDIRSG--EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVD 320
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE---YKGHICKSFKT 232
+ +++ + +++S +G + +D+ + + L + +KGH+ +
Sbjct: 321 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 380
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ ++V G +G + WD + ++FKAH V
Sbjct: 381 QVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKV 420
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 64/256 (25%), Positives = 108/256 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-VHVTADNSK 74
GH AV FN G LS DR ++LW+ G I + + R+V V D K
Sbjct: 198 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN--RKVPYCVKFNPDEDK 255
Query: 75 --LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L G D++I WD+ +G +++++ H VN + F + + VS D+SLR W+
Sbjct: 256 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 315
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD----IRVGRE--LSDDL 183
+ I + S+ +V L+ + S+D + F R+ ++ +
Sbjct: 316 -DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHM 374
Query: 184 GQPVNC-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSD 240
C + S D + +++ + L + D T +L +K H +C T+
Sbjct: 375 VAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKV 434
Query: 241 AHVTGGSEDGYIYFWD 256
+T G DG I WD
Sbjct: 435 --ITCGW-DGLIKLWD 447
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 234 (87.4 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 65/280 (23%), Positives = 120/280 (42%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGD-GNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
+P+ + GH V A R+ G+ LS G D T+++W+ + I+TY H + V
Sbjct: 292 VPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQAV 351
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ + D + +SCG DRQ WD TG+++ F + +KFN + +
Sbjct: 352 RDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPY-CIKFNPDDDKQEQFLCG 410
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTFDIRVG-- 176
G D+ + WD +S+ +Q D +V ++ + S D ++R +D +
Sbjct: 411 GSDKKIIQWDIKSNQI--VQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDWGIPVV 468
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLL---DRSTGELLQEYKGHICKSFKT 232
+ +SD + +++ G A LD+ + + DR + + GH +
Sbjct: 469 IKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLGHNVSGYAC 528
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ + G G +FWD + ++ AH+ V
Sbjct: 529 QLGFSPDGKFIYSGDSTGKAFFWDWKTSKIIKTINAHNNV 568
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 236 (88.1 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 57/208 (27%), Positives = 98/208 (47%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
+E +L GH G V F+ D NY LSC +D T+RLW+ + YK H V D
Sbjct: 514 SELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 573
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ +S G DR W + +R F GH ++V +F+ S+ + + D+++R
Sbjct: 574 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRL 633
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
WD + + ++I + + S+ + + G+ DG V +DI G + + G
Sbjct: 634 WDVLNGNC--VRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 691
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD 212
+ + S DG + + +D+T+RL D
Sbjct: 692 DTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 175 (66.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 56/225 (24%), Positives = 92/225 (40%)
Query: 43 RLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHE 102
R+ + +K H V + D + L+SC D + W + T + ++GH
Sbjct: 506 RIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHN 565
Query: 103 SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE---- 158
V +F+ Y VS G+D+ R W H +P++I F + V T+
Sbjct: 566 YPVWDTQFSPYGYYFVSGGHDRVARLW-ATDHY-QPLRI---FAGHLADVTCTRFHPNSN 620
Query: 159 -IIGGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRST 215
I GS D TVR +D+ G + G P++ ++ S +G + D + L D
Sbjct: 621 YIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGH 680
Query: 216 GELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260
G ++ E KGH + + + GS D + WD V A
Sbjct: 681 GLMVGELKGHTDTIYALR--FSRDGEILASGSMDNTVRLWDAVKA 723
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 232 (86.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 64/248 (25%), Positives = 116/248 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V + ++ DRTI++W+ G + H VR V V+A +
Sbjct: 201 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARS 260
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L SCG D+Q+ WD+ +VIR + GH S V + + V+V+ D + R WD R
Sbjct: 261 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 320
Query: 133 SHSTEPIQIIDSFQDSVMSV-C-LTKTEIIGGSVDGTVRTFDIRVG--RELSDDLGQPVN 188
+ ++ + + ++V +V C + +++ GS D T+R +D+ G R + + V
Sbjct: 321 TKAS--VHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 378
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
+ + + + AS ++ G +Q GH + + NSD + G++
Sbjct: 379 AVIL-HPRHYTFASGSPDNIKQWKFPDGNFIQNLSGH---NAIINTLTVNSDGVLVSGAD 434
Query: 249 DGYIYFWD 256
+G ++ WD
Sbjct: 435 NGTMHLWD 442
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 46/211 (21%), Positives = 87/211 (41%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH AV + + ++C +D T R+W+ + T H V V A ++
Sbjct: 288 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQV 347
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS 135
++ D I WD+ G+ H+ V AV + S D +++ W +
Sbjct: 348 VTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPD-NIKQWKFPDGN 406
Query: 136 TEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
IQ + S +++++ ++ ++ G+ +GT+ +D R G + V S+
Sbjct: 407 F--IQNL-SGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQR-VHAAVQPGSLD 462
Query: 194 NDGNCILASCLD-STLRLLDRSTGELLQEYK 223
++ I A D S RLL + ++ YK
Sbjct: 463 SESG-IFACVFDQSESRLLTAEADKTIKVYK 492
Score = 124 (48.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 36/128 (28%), Positives = 55/128 (42%)
Query: 8 RTEANV--LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
RT+A+V L GH AV + ++ D TIRLW+ G T +H + VR
Sbjct: 320 RTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 379
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
V + + G I W G I+ GH + +N + N V+VS + +
Sbjct: 380 V-ILHPRHYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLTVNS-DGVLVSGADNGT 437
Query: 126 LRAWDCRS 133
+ WD R+
Sbjct: 438 MHLWDWRT 445
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 189 (71.6 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 81 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 139
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 140 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 199
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 200 TKECKAELREHEHVVE 215
Score = 166 (63.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 149 (57.5 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 123 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 182
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 183 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 233
Score = 149 (57.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 21 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 79
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 137
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 138 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 196
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 197 VVATKECKAELREH 210
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 306 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 82 (33.9 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 306 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 57 (25.1 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 300
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSL 321
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 57/216 (26%), Positives = 105/216 (48%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S+ R +L GH G V +A F+ G++ LS D TIRLW+ ++ YK H
Sbjct: 402 SIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNY 461
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
V D + SC DR W + + +R GH S+V+ V+++ + + +
Sbjct: 462 PVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGS 521
Query: 122 YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGREL 179
D+++R WD ++ E ++I + V+S+ ++ + G DGT+ +D+ R +
Sbjct: 522 SDKTVRLWDVQTG--ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI 579
Query: 180 SDDLGQPVNCI---SMSNDGNCILASCLDSTLRLLD 212
+ +G +C+ S S +G+ + + D T++L D
Sbjct: 580 TPLMGHN-SCVWSLSYSGEGSLLASGSADCTVKLWD 614
Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
++ GH V +++ + NY + D+T+RLW+ G ++ + H V + ++ D
Sbjct: 497 IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDG 556
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+ S D I WD+ST R I GH S V ++ ++ S++ S D +++ WD
Sbjct: 557 RYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVT 616
Query: 133 SHSTE 137
S ST+
Sbjct: 617 S-STK 620
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 52/246 (21%), Positives = 93/246 (37%)
Query: 24 ARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQ 83
A+ G+ L D + + P+ H V + ++S D
Sbjct: 382 AKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTT 441
Query: 84 IFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIID 143
I W + ++GH V +F+ + S +D++ R W +P++I+
Sbjct: 442 IRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSM--DRIQPLRIMA 499
Query: 144 SFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCI 199
V V I GS D TVR +D++ G + +G V ++MS DG +
Sbjct: 500 GHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYM 559
Query: 200 LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259
+ D T+ + D ST + GH S + + + GS D + WD+
Sbjct: 560 ASGDEDGTIMMWDLSTARCITPLMGH--NSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
Query: 260 ASVVAK 265
++ + K
Sbjct: 618 STKLTK 623
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 48/184 (26%), Positives = 73/184 (39%)
Query: 100 GHESEVNAVKFNEYSSVVVSAGYDQSLRAWD--------CRSHSTEPI--QIIDSFQDSV 149
GH V + F+ V+S+ D ++R W C P+ F
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 150 MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLR 209
S +T I S+D ++ I G LSD V+C+ + N I D T+R
Sbjct: 476 ASCSHDRTARIW-SMD-RIQPLRIMAGH-LSD-----VDCVQWHPNCNYIATGSSDKTVR 527
Query: 210 LLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
L D TGE ++ + GH +S ++ ++ G EDG I WDL A + H
Sbjct: 528 LWDVQTGECVRIFIGH--RSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGH 585
Query: 270 SLVV 273
+ V
Sbjct: 586 NSCV 589
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 235 (87.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 60/208 (28%), Positives = 99/208 (47%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
+E +L GH G V A F+ D NY LS +D T+RLW+ + YK H V D
Sbjct: 532 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 591
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ +S G DR W + +R F GH ++VN +F+ S+ V + D+++R
Sbjct: 592 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 651
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
WD + + ++I + + S+ + + G+ DG V +DI G + + G
Sbjct: 652 WDVLNGNC--VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 709
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD 212
S+ S DG + + +D+T+RL D
Sbjct: 710 DTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 171 (65.3 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 56/224 (25%), Positives = 90/224 (40%)
Query: 43 RLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHE 102
R+ + +K H V + D + L+S D + W + T + ++GH
Sbjct: 524 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 583
Query: 103 SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEII 160
V +F+ Y VS G+D+ R W H +P++I V +
Sbjct: 584 YPVWDTQFSPYGYYFVSGGHDRVARLW-ATDHY-QPLRIFAGHLADVNCTRFHPNSNYVA 641
Query: 161 GGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218
GS D TVR +D+ G + G P++ ++ S +G + D + L D G +
Sbjct: 642 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 701
Query: 219 LQEYKGHICKSFKTDCCLTNS-DAHV-TGGSEDGYIYFWDLVDA 260
+ E KGH T C L S D + GS D + WD + A
Sbjct: 702 VGELKGHT----DTVCSLRFSRDGEILASGSMDNTVRLWDAIKA 741
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 235 (87.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 60/208 (28%), Positives = 99/208 (47%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
+E +L GH G V A F+ D NY LS +D T+RLW+ + YK H V D
Sbjct: 534 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 593
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ +S G DR W + +R F GH ++VN +F+ S+ V + D+++R
Sbjct: 594 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
WD + + ++I + + S+ + + G+ DG V +DI G + + G
Sbjct: 654 WDVLNGNC--VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 711
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD 212
S+ S DG + + +D+T+RL D
Sbjct: 712 DTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 172 (65.6 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 57/224 (25%), Positives = 90/224 (40%)
Query: 43 RLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHE 102
R+ + +K H V + D + L+S D + W + T + ++GH
Sbjct: 526 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 585
Query: 103 SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEII 160
V +F+ Y VS G+D+ R W H +P++I V +
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLW-ATDHY-QPLRIFAGHLADVNCTRFHPNSNYVA 643
Query: 161 GGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218
GS D TVR +D+ G + G P++ ++ S +G + D + L D G +
Sbjct: 644 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 703
Query: 219 LQEYKGHICKSFKTDCCLTNS-DAHV-TGGSEDGYIYFWDLVDA 260
+ E KGH T C L S D + GS D + WD V A
Sbjct: 704 VGELKGHT----DTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 743
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 235 (87.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 60/208 (28%), Positives = 99/208 (47%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
+E +L GH G V A F+ D NY LS +D T+RLW+ + YK H V D
Sbjct: 534 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 593
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ +S G DR W + +R F GH ++VN +F+ S+ V + D+++R
Sbjct: 594 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
WD + + ++I + + S+ + + G+ DG V +DI G + + G
Sbjct: 654 WDVLNGNC--VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 711
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD 212
S+ S DG + + +D+T+RL D
Sbjct: 712 DTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 171 (65.3 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 56/224 (25%), Positives = 90/224 (40%)
Query: 43 RLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHE 102
R+ + +K H V + D + L+S D + W + T + ++GH
Sbjct: 526 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 585
Query: 103 SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEII 160
V +F+ Y VS G+D+ R W H +P++I V +
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLW-ATDHY-QPLRIFAGHLADVNCTRFHPNSNYVA 643
Query: 161 GGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218
GS D TVR +D+ G + G P++ ++ S +G + D + L D G +
Sbjct: 644 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 703
Query: 219 LQEYKGHICKSFKTDCCLTNS-DAHV-TGGSEDGYIYFWDLVDA 260
+ E KGH T C L S D + GS D + WD + A
Sbjct: 704 VGELKGHT----DTVCSLRFSRDGEILASGSMDNTVRLWDAIKA 743
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 235 (87.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 60/208 (28%), Positives = 99/208 (47%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
+E +L GH G V A F+ D NY LS +D T+RLW+ + YK H V D
Sbjct: 535 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 594
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ +S G DR W + +R F GH ++VN +F+ S+ V + D+++R
Sbjct: 595 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 654
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
WD + + ++I + + S+ + + G+ DG V +DI G + + G
Sbjct: 655 WDVLNGNC--VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 712
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD 212
S+ S DG + + +D+T+RL D
Sbjct: 713 DTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 172 (65.6 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 57/224 (25%), Positives = 90/224 (40%)
Query: 43 RLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHE 102
R+ + +K H V + D + L+S D + W + T + ++GH
Sbjct: 527 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 586
Query: 103 SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEII 160
V +F+ Y VS G+D+ R W H +P++I V +
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLW-ATDHY-QPLRIFAGHLADVNCTRFHPNSNYVA 644
Query: 161 GGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218
GS D TVR +D+ G + G P++ ++ S +G + D + L D G +
Sbjct: 645 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLM 704
Query: 219 LQEYKGHICKSFKTDCCLTNS-DAHV-TGGSEDGYIYFWDLVDA 260
+ E KGH T C L S D + GS D + WD V A
Sbjct: 705 VGELKGHT----DTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 744
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 231 (86.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 68/259 (26%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GN+ LS G D+T +W+ H G + + H DV +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS 318
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R I+ F+GH +EVNA+K++ +++ S D +L+ W
Sbjct: 319 NNT-FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS 377
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++H+ E I S + + S D TVR +D+ G
Sbjct: 378 MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT 437
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + TG L+ Y+G + C
Sbjct: 438 LTKHQ-EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG---TGGIFEVCWNA 493
Query: 239 SDAHVTGGSEDGYIYFWDL 257
+ V + DG + DL
Sbjct: 494 AGDKVGASASDGSVCVLDL 512
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 61/231 (26%), Positives = 100/231 (43%)
Query: 58 SHGREVRDVHVTADN-SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116
++G E H A+N + ++ GD +I + + RGHESEV +N S +
Sbjct: 131 ANGEE-NGAHTIANNHTDMMEVDGDVEI-----PPNKAV-VLRGHESEVFICAWNPVSDL 183
Query: 117 VVSAGYDQSLRAWDCRSHSTE-PIQII------DSFQDSVMSVCLTK-------TEIIGG 162
+ S D + R W+ +ST P Q++ + QD + +T T + G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 163 SVDGTVRTFDIRVGRELSDDLGQ---PVNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
S DG R + + G L+ LGQ P+ + + GN IL++ +D T + D TGE
Sbjct: 244 SYDGFARIWT-KDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK 301
Query: 220 QEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
Q++ H + D N+ A S D I+ L + F+ H+
Sbjct: 302 QQFPFHSAPALDVDWQSNNTFASC---STDMCIHVCKLGQDRPIKTFQGHT 349
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 58/239 (24%), Positives = 97/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--------PHRGIHIKTY 56
++P +A VL+GHE V +N + S D T R+WN P + +
Sbjct: 156 EIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCI 215
Query: 57 KSHGREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
+ G++V +DV NS+ L++ G D W G + H+ + A+K+
Sbjct: 216 REGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKW 274
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGG-SVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V S D +
Sbjct: 275 NKKGNFILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I GN +LASC D TL++ + + + H
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNCVHDLQAH 390
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 33/107 (30%), Positives = 48/107 (44%)
Query: 27 NGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIF 85
N + N L S D T+RLW+ RGI I T H V V + D L S D+ +
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 86 YWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
W+ TG ++ +RG + V +N V ++ D S+ D R
Sbjct: 468 IWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 231 (86.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 68/259 (26%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GN+ LS G D+T +W+ H G + + H DV +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS 318
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R I+ F+GH +EVNA+K++ +++ S D +L+ W
Sbjct: 319 NNT-FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS 377
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++H+ E I S + + S D TVR +D+ G
Sbjct: 378 MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT 437
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + TG L+ Y+G + C
Sbjct: 438 LTKHQ-EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG---TGGIFEVCWNA 493
Query: 239 SDAHVTGGSEDGYIYFWDL 257
+ V + DG + DL
Sbjct: 494 AGDKVGASASDGSVCVLDL 512
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 60/231 (25%), Positives = 99/231 (42%)
Query: 58 SHGREVRDVHVTADN-SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116
++G E H A+N + ++ GD +I + + RGHESEV +N S +
Sbjct: 131 ANGEE-NGAHTIANNHTDMMEVDGDVEI-----PPNKAV-VLRGHESEVFICAWNPVSDL 183
Query: 117 VVSAGYDQSLRAWDCRSHSTE-PIQII------DSFQDSVMSVCLTK-------TEIIGG 162
+ S D + R W+ +ST Q++ + QD + +T T + G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 163 SVDGTVRTFDIRVGRELSDDLGQ---PVNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
S DG R + + G L+ LGQ P+ + + GN IL++ +D T + D TGE
Sbjct: 244 SYDGFARIWT-KDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK 301
Query: 220 QEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
Q++ H + D N+ A S D I+ L + F+ H+
Sbjct: 302 QQFPFHSAPALDVDWQSNNTFASC---STDMCIHVCKLGQDRPIKTFQGHT 349
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 57/239 (23%), Positives = 97/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-------IHIK-TY 56
++P +A VL+GHE V +N + S D T R+WN + ++
Sbjct: 156 EIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCI 215
Query: 57 KSHGREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
+ G++V +DV NS+ L++ G D W G + H+ + A+K+
Sbjct: 216 REGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKW 274
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGG-SVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V S D +
Sbjct: 275 NKKGNFILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I GN +LASC D TL++ + + + H
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNCVHDLQAH 390
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 33/107 (30%), Positives = 48/107 (44%)
Query: 27 NGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIF 85
N + N L S D T+RLW+ RGI I T H V V + D L S D+ +
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 86 YWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
W+ TG ++ +RG + V +N V ++ D S+ D R
Sbjct: 468 IWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 231 (86.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 68/259 (26%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GN+ LS G D+T +W+ H G + + H DV +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS 318
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R I+ F+GH +EVNA+K++ +++ S D +L+ W
Sbjct: 319 NNT-FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS 377
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++H+ E I S + + S D TVR +D+ G
Sbjct: 378 MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT 437
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + TG L+ Y+G + C
Sbjct: 438 LTKHQ-EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG---TGGIFEVCWNA 493
Query: 239 SDAHVTGGSEDGYIYFWDL 257
+ V + DG + DL
Sbjct: 494 AGDKVGASASDGSVCVLDL 512
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 60/231 (25%), Positives = 99/231 (42%)
Query: 58 SHGREVRDVHVTADN-SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116
++G E H A+N + ++ GD +I + + RGHESEV +N S +
Sbjct: 131 ANGEE-NGAHTIANNHTDMMEVDGDVEI-----PPNKAV-VLRGHESEVFICAWNPVSDL 183
Query: 117 VVSAGYDQSLRAWDCRSHSTE-PIQII------DSFQDSVMSVCLTK-------TEIIGG 162
+ S D + R W+ +ST Q++ + QD + +T T + G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 163 SVDGTVRTFDIRVGRELSDDLGQ---PVNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
S DG R + + G L+ LGQ P+ + + GN IL++ +D T + D TGE
Sbjct: 244 SYDGFARIWT-KDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK 301
Query: 220 QEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
Q++ H + D N+ A S D I+ L + F+ H+
Sbjct: 302 QQFPFHSAPALDVDWQSNNTFASC---STDMCIHVCKLGQDRPIKTFQGHT 349
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 57/239 (23%), Positives = 97/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-------IHIK-TY 56
++P +A VL+GHE V +N + S D T R+WN + ++
Sbjct: 156 EIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCI 215
Query: 57 KSHGREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
+ G++V +DV NS+ L++ G D W G + H+ + A+K+
Sbjct: 216 REGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKW 274
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGG-SVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V S D +
Sbjct: 275 NKKGNFILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I GN +LASC D TL++ + + + H
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNCVHDLQAH 390
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 33/107 (30%), Positives = 48/107 (44%)
Query: 27 NGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIF 85
N + N L S D T+RLW+ RGI I T H V V + D L S D+ +
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 86 YWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
W+ TG ++ +RG + V +N V ++ D S+ D R
Sbjct: 468 IWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 231 (86.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 68/259 (26%), Positives = 116/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GN+ LS G D+T +W+ H G + + H DV +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS 318
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R I+ F+GH +EVNA+K++ +++ S D +L+ W
Sbjct: 319 NNT-FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS 377
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RE 178
D ++H+ E I S + + S D TVR +D+ G
Sbjct: 378 MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT 437
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L+ +PV ++ S DG + + D + + + TG L+ Y+G + C
Sbjct: 438 LTKHQ-EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG---TGGIFEVCWNA 493
Query: 239 SDAHVTGGSEDGYIYFWDL 257
+ V + DG + DL
Sbjct: 494 AGDKVGASASDGSVCVLDL 512
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 58/239 (24%), Positives = 97/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--------PHRGIHIKTY 56
++P +A VL+GHE V +N + S D T R+WN P + +
Sbjct: 156 EIPSNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCI 215
Query: 57 KSHGREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
+ G++V +DV NS+ L++ G D W G + H+ + A+K+
Sbjct: 216 REGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKW 274
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGG-SVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V S D +
Sbjct: 275 NKKGNFILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I GN +LASC D TL++ + + + H
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNCVHDLQAH 390
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 33/107 (30%), Positives = 48/107 (44%)
Query: 27 NGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIF 85
N + N L S D T+RLW+ RGI I T H V V + D L S D+ +
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 86 YWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
W+ TG ++ +RG + V +N V ++ D S+ D R
Sbjct: 468 IWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 230 (86.0 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 65/248 (26%), Positives = 115/248 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V + ++ DRTI++W+ G + H VR V V+ +
Sbjct: 198 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 257
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L SCG D+Q+ WD+ +VIR + GH S V + + V+V+ D + R WD R
Sbjct: 258 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 317
Query: 133 SHSTEPIQIIDSFQDSVMSV-C-LTKTEIIGGSVDGTVRTFDIRVG--RELSDDLGQPVN 188
+ ++ + + ++V +V C + +II GS D T+R +D+ G R + + V
Sbjct: 318 TKAS--VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 375
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
+ + + + AS ++ G +Q GH + + NSD + G++
Sbjct: 376 AVVL-HPRHYTFASGSPDNIKQWKFPDGSFIQNLSGH---NAIINTLTVNSDGVLVSGAD 431
Query: 249 DGYIYFWD 256
+G ++ WD
Sbjct: 432 NGTMHLWD 439
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 48/211 (22%), Positives = 87/211 (41%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH AV + + ++C +D T R+W+ + T H V V A ++
Sbjct: 285 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 344
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS 135
I+ D I WD+ G+ H+ V AV + S D +++ W S
Sbjct: 345 ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGS 403
Query: 136 TEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
IQ + S +++++ ++ ++ G+ +GT+ +D R G + V S+
Sbjct: 404 F--IQNL-SGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQR-VHAAVQPGSLD 459
Query: 194 NDGNCILASCLD-STLRLLDRSTGELLQEYK 223
++ I A D S RLL + ++ YK
Sbjct: 460 SESG-IFACAFDQSESRLLTAEADKTIKVYK 489
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 8 RTEANV--LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
RT+A+V L GH AV R ++ D TIRLW+ G T +H + VR
Sbjct: 317 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 376
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
V V + G I W G I+ GH + +N + N V+VS + +
Sbjct: 377 V-VLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNS-DGVLVSGADNGT 434
Query: 126 LRAWDCRS 133
+ WD R+
Sbjct: 435 MHLWDWRT 442
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 230 (86.0 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 65/248 (26%), Positives = 115/248 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V + ++ DRTI++W+ G + H VR V V+ +
Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 258
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L SCG D+Q+ WD+ +VIR + GH S V + + V+V+ D + R WD R
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 133 SHSTEPIQIIDSFQDSVMSV-C-LTKTEIIGGSVDGTVRTFDIRVG--RELSDDLGQPVN 188
+ ++ + + ++V +V C + +II GS D T+R +D+ G R + + V
Sbjct: 319 TKAS--VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 376
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
+ + + + AS ++ G +Q GH + + NSD + G++
Sbjct: 377 AVVL-HPRHYTFASGSPDNIKQWKFPDGSFIQNLSGH---NAIINTLTVNSDGVLVSGAD 432
Query: 249 DGYIYFWD 256
+G ++ WD
Sbjct: 433 NGTMHLWD 440
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/211 (22%), Positives = 87/211 (41%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH AV + + ++C +D T R+W+ + T H V V A ++
Sbjct: 286 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 345
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS 135
I+ D I WD+ G+ H+ V AV + S D +++ W S
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGS 404
Query: 136 TEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
IQ + S +++++ ++ ++ G+ +GT+ +D R G + V S+
Sbjct: 405 F--IQNL-SGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQR-VHAAVQPGSLD 460
Query: 194 NDGNCILASCLD-STLRLLDRSTGELLQEYK 223
++ I A D S RLL + ++ Y+
Sbjct: 461 SESG-IFACAFDQSESRLLTAEADKTIKVYR 490
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 8 RTEANV--LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
RT+A+V L GH AV R ++ D TIRLW+ G T +H + VR
Sbjct: 318 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 377
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
V V + G I W G I+ GH + +N + N V+VS + +
Sbjct: 378 V-VLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNS-DGVLVSGADNGT 435
Query: 126 LRAWDCRS 133
+ WD R+
Sbjct: 436 MHLWDWRT 443
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 230 (86.0 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 65/248 (26%), Positives = 115/248 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V + ++ DRTI++W+ G + H VR V V+ +
Sbjct: 200 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 259
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L SCG D+Q+ WD+ +VIR + GH S V + + V+V+ D + R WD R
Sbjct: 260 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 319
Query: 133 SHSTEPIQIIDSFQDSVMSV-C-LTKTEIIGGSVDGTVRTFDIRVG--RELSDDLGQPVN 188
+ ++ + + ++V +V C + +II GS D T+R +D+ G R + + V
Sbjct: 320 TKAS--VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 377
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
+ + + + AS ++ G +Q GH + + NSD + G++
Sbjct: 378 AVVL-HPRHYTFASGSPDNIKQWKFPDGSFIQNLSGH---NAIINTLTVNSDGVLVSGAD 433
Query: 249 DGYIYFWD 256
+G ++ WD
Sbjct: 434 NGTMHLWD 441
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 48/211 (22%), Positives = 87/211 (41%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH AV + + ++C +D T R+W+ + T H V V A ++
Sbjct: 287 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 346
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS 135
I+ D I WD+ G+ H+ V AV + S D +++ W S
Sbjct: 347 ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGS 405
Query: 136 TEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
IQ + S +++++ ++ ++ G+ +GT+ +D R G + V S+
Sbjct: 406 F--IQNL-SGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQR-VHAAVQPGSLD 461
Query: 194 NDGNCILASCLD-STLRLLDRSTGELLQEYK 223
++ I A D S RLL + ++ YK
Sbjct: 462 SESG-IFACAFDQSESRLLTAEADKTIKVYK 491
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 8 RTEANV--LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
RT+A+V L GH AV R ++ D TIRLW+ G T +H + VR
Sbjct: 319 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 378
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
V V + G I W G I+ GH + +N + N V+VS + +
Sbjct: 379 V-VLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNS-DGVLVSGADNGT 436
Query: 126 LRAWDCRS 133
+ WD R+
Sbjct: 437 MHLWDWRT 444
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 231 (86.4 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 69/280 (24%), Positives = 124/280 (44%)
Query: 6 LPRTEANVLKGHEGAVLAAR-FNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
LP+ + +V GH V A R F G+ LSC D I+LW + ++T+ H + V
Sbjct: 275 LPKKQLHVWTGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAV 334
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RDV ++ +S DR I WD TG+ I +F + VKFN + +++V+
Sbjct: 335 RDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTNRKVPY-CVKFNPDEDKQNLLVAG 393
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTF--DIRVG 176
D+ + WD RS E +Q D +V ++ + S D ++R + DI
Sbjct: 394 MSDKKIVQWDIRSG--EVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPAD 451
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE---YKGHICKSFKT 232
+ +++ + +++S +G + +D+ + + L + +KGH+ +
Sbjct: 452 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 511
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ ++V G DG + WD + + KAH V
Sbjct: 512 QVDFSPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKV 551
Score = 163 (62.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 68/256 (26%), Positives = 109/256 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-VHVTADNSK 74
GH AV FN G LS DR I+LW+ G I + + R+V V D K
Sbjct: 329 GHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTN--RKVPYCVKFNPDEDK 386
Query: 75 --LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L+ G D++I WD+ +G V++++ H VN + F + + VS D+SLR W+
Sbjct: 387 QNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEW 446
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD----IRVGRE--LSDDL 183
+ I + S+ +V L+ + S+D + F R+ ++ +
Sbjct: 447 -DIPADFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHM 505
Query: 184 GQPVNC-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSD 240
C + S D + +++ D L + D T +L K H +C S T+
Sbjct: 506 VAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHETSKV 565
Query: 241 AHVTGGSEDGYIYFWD 256
+T G DG I WD
Sbjct: 566 --ITCGW-DGQIKLWD 578
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 231 (86.4 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 68/280 (24%), Positives = 126/280 (45%)
Query: 6 LPRTEANVLKGHEGAVLAAR-FNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
LP+ + +V GH V A R F G+ LSC D I+LW + ++T+ H + V
Sbjct: 276 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAV 335
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ ++ +S DR + WD TG+ I +F + VKFN + ++ V+
Sbjct: 336 RDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAG 394
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTF--DIRVG 176
D+ + WD RS E +Q D +V ++ + S D ++R + DI V
Sbjct: 395 MSDKKIVQWDIRSG--EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVD 452
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE---YKGHICKSFKT 232
+ +++ + +++S +G + +D+ + + L + +KGH+ +
Sbjct: 453 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 512
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ ++V G +G + WD + ++FKAH V
Sbjct: 513 QVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKV 552
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 64/256 (25%), Positives = 108/256 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-VHVTADNSK 74
GH AV FN G LS DR ++LW+ G I + + R+V V D K
Sbjct: 330 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN--RKVPYCVKFNPDEDK 387
Query: 75 --LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L G D++I WD+ +G +++++ H VN + F + + VS D+SLR W+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD----IRVGRE--LSDDL 183
+ I + S+ +V L+ + S+D + F R+ ++ +
Sbjct: 448 -DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHM 506
Query: 184 GQPVNC-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSD 240
C + S D + +++ + L + D T +L +K H +C T+
Sbjct: 507 VAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKV 566
Query: 241 AHVTGGSEDGYIYFWD 256
+T G DG I WD
Sbjct: 567 --ITCGW-DGLIKLWD 579
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 231 (86.4 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 68/280 (24%), Positives = 126/280 (45%)
Query: 6 LPRTEANVLKGHEGAVLAAR-FNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
LP+ + +V GH V A R F G+ LSC D I+LW + ++T+ H + V
Sbjct: 276 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAV 335
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ ++ +S DR + WD TG+ I +F + VKFN + ++ V+
Sbjct: 336 RDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAG 394
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTF--DIRVG 176
D+ + WD RS E +Q D +V ++ + S D ++R + DI V
Sbjct: 395 MSDKKIVQWDIRSG--EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVD 452
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE---YKGHICKSFKT 232
+ +++ + +++S +G + +D+ + + L + +KGH+ +
Sbjct: 453 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 512
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ ++V G +G + WD + ++FKAH V
Sbjct: 513 QVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKV 552
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 64/256 (25%), Positives = 108/256 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-VHVTADNSK 74
GH AV FN G LS DR ++LW+ G I + + R+V V D K
Sbjct: 330 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN--RKVPYCVKFNPDEDK 387
Query: 75 --LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L G D++I WD+ +G +++++ H VN + F + + VS D+SLR W+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD----IRVGRE--LSDDL 183
+ I + S+ +V L+ + S+D + F R+ ++ +
Sbjct: 448 -DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHM 506
Query: 184 GQPVNC-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSD 240
C + S D + +++ + L + D T +L +K H +C T+
Sbjct: 507 VAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKV 566
Query: 241 AHVTGGSEDGYIYFWD 256
+T G DG I WD
Sbjct: 567 --ITCGW-DGLIKLWD 579
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 231 (86.4 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 68/280 (24%), Positives = 126/280 (45%)
Query: 6 LPRTEANVLKGHEGAVLAAR-FNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
LP+ + +V GH V A R F G+ LSC D I+LW + ++T+ H + V
Sbjct: 276 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAV 335
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ ++ +S DR + WD TG+ I +F + VKFN + ++ V+
Sbjct: 336 RDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAG 394
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTF--DIRVG 176
D+ + WD RS E +Q D +V ++ + S D ++R + DI V
Sbjct: 395 MSDKKIVQWDIRSG--EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVD 452
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE---YKGHICKSFKT 232
+ +++ + +++S +G + +D+ + + L + +KGH+ +
Sbjct: 453 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 512
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ ++V G +G + WD + ++FKAH V
Sbjct: 513 QVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKV 552
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 64/256 (25%), Positives = 108/256 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-VHVTADNSK 74
GH AV FN G LS DR ++LW+ G I + + R+V V D K
Sbjct: 330 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN--RKVPYCVKFNPDEDK 387
Query: 75 --LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L G D++I WD+ +G +++++ H VN + F + + VS D+SLR W+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD----IRVGRE--LSDDL 183
+ I + S+ +V L+ + S+D + F R+ ++ +
Sbjct: 448 -DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHM 506
Query: 184 GQPVNC-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSD 240
C + S D + +++ + L + D T +L +K H +C T+
Sbjct: 507 VAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKV 566
Query: 241 AHVTGGSEDGYIYFWD 256
+T G DG I WD
Sbjct: 567 --ITCGW-DGLIKLWD 579
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 190 (71.9 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 44/154 (28%), Positives = 73/154 (47%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIG 161
+C++ E +++ + S T +E G
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSTISEATG 298
Score = 167 (63.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 52/198 (26%), Positives = 87/198 (43%)
Query: 6 LPRT-EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
+PR E L GH V F+ + +S +D TI++W+ G +T K H V+
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ 154
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D+ L SC D I WD IR GH+ V++V +VSA D+
Sbjct: 155 DISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDK 214
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELSDD 182
+++ W+ ++ ++ ++ V V + T I S D TVR + + +E +
Sbjct: 215 TIKMWEVQTGYC--VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKAE 271
Query: 183 LGQP---VNCISMSNDGN 197
L + V CIS + + +
Sbjct: 272 LREHEHVVECISWAPESS 289
Score = 165 (63.1 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/102 (30%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WD+STG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 130 (50.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 44/183 (24%), Positives = 86/183 (46%)
Query: 100 GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-E 158
GH S V V F+ SV+VSA D +++ WD + E + + DSV + T +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHTGK 163
Query: 159 IIGG-SVDGTVRTFDIRVGRELSDDL-GQP--VNCISMSNDGNCILASCLDSTLRLLDRS 214
++ S D T++ +D + G E + G V+ +++ +G+ I+++ D T+++ +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 215 TGELLQEYKGHICKSFKTDCCLTNSDAHVTGG-SEDGYIYFWDLVDASVVAKFKAHSLVV 273
TG ++ + GH + + N D + S D + W + A+ + H VV
Sbjct: 223 TGYCVKTFTGH--REW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 274 KLL 276
+ +
Sbjct: 280 ECI 282
Score = 82 (33.9 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 26/100 (26%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +DI G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 58 (25.5 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DFKNKRCMKTLNAHEHFVTSL 386
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 230 (86.0 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 68/280 (24%), Positives = 126/280 (45%)
Query: 6 LPRTEANVLKGHEGAVLAAR-FNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
LP+ + +V GH V A R F G+ LSC D I+LW + ++T+ H + V
Sbjct: 276 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAV 335
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ ++ +S DR + WD TG+ I +F + VKFN + ++ V+
Sbjct: 336 RDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAG 394
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTF--DIRVG 176
D+ + WD RS E +Q D +V ++ + S D ++R + DI V
Sbjct: 395 MSDKKIVQWDIRSG--EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVD 452
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE---YKGHICKSFKT 232
+ +++ + +++S +G + +D+ + + L + +KGH+ +
Sbjct: 453 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 512
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ ++V G +G + WD + ++FKAH V
Sbjct: 513 QVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKV 552
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 64/256 (25%), Positives = 108/256 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-VHVTADNSK 74
GH AV FN G LS DR ++LW+ G I + + R+V V D K
Sbjct: 330 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN--RKVPYCVKFNPDEDK 387
Query: 75 --LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L G D++I WD+ +G +++++ H VN + F + + VS D+SLR W+
Sbjct: 388 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 447
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD----IRVGRE--LSDDL 183
+ I + S+ +V L+ + S+D + F R+ ++ +
Sbjct: 448 -DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHM 506
Query: 184 GQPVNC-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSD 240
C + S D + +++ + L + D T +L +K H +C T+
Sbjct: 507 VAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKV 566
Query: 241 AHVTGGSEDGYIYFWD 256
+T G DG I WD
Sbjct: 567 --ITCGW-DGLIKLWD 579
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 229 (85.7 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 70/259 (27%), Positives = 114/259 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ H G + + H DV
Sbjct: 269 ASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD-WQ 327
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N SC D I + ++ F+GH +EVNA+K++ ++ S D +L+ W
Sbjct: 328 NNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 387
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
D ++HS E I S S + + S D TVR +D+ G +
Sbjct: 388 MKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQG-VCTH 446
Query: 182 DL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
L +PV ++ S DG + + D + + + +G L+ Y+G F+ C
Sbjct: 447 TLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQG-TGGIFEV-CWNAR 504
Query: 239 SDAHVTGGSEDGYIYFWDL 257
D V + DG + DL
Sbjct: 505 GDK-VGASASDGSVCVLDL 522
Score = 123 (48.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 58/239 (24%), Positives = 93/239 (38%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR---GIHIKTYKSH-- 59
++P +A VL+GHE V +N + S D T R+WN + G + H
Sbjct: 166 EIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 225
Query: 60 ---GREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
G +V +DV NS L++ G D W G + H+ + A+K+
Sbjct: 226 REGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKGPIFALKW 284
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGG-SVDGTVR 169
N+ + V+SAG D++ WD +H+ E Q + V S D +
Sbjct: 285 NKKGNYVLSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIH 342
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ + G VN I G +LASC D TL++ + + + H
Sbjct: 343 VCRLGCDHPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQDACVHDLQAH 400
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 231 (86.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 68/280 (24%), Positives = 126/280 (45%)
Query: 6 LPRTEANVLKGHEGAVLAAR-FNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREV 63
LP+ + +V GH V A R F G+ LSC D I+LW + ++T+ H + V
Sbjct: 360 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAV 419
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN---EYSSVVVSA 120
RD+ ++ +S DR + WD TG+ I +F + VKFN + ++ V+
Sbjct: 420 RDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPY-CVKFNPDEDKQNLFVAG 478
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTF--DIRVG 176
D+ + WD RS E +Q D +V ++ + S D ++R + DI V
Sbjct: 479 MSDKKIVQWDIRSG--EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVD 536
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE---YKGHICKSFKT 232
+ +++ + +++S +G + +D+ + + L + +KGH+ +
Sbjct: 537 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 596
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ ++V G +G + WD + ++FKAH V
Sbjct: 597 QVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKV 636
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 64/256 (25%), Positives = 108/256 (42%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-VHVTADNSK 74
GH AV FN G LS DR ++LW+ G I + + R+V V D K
Sbjct: 414 GHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTN--RKVPYCVKFNPDEDK 471
Query: 75 --LISCG-GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L G D++I WD+ +G +++++ H VN + F + + VS D+SLR W+
Sbjct: 472 QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW 531
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFD----IRVGRE--LSDDL 183
+ I + S+ +V L+ + S+D + F R+ ++ +
Sbjct: 532 -DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHM 590
Query: 184 GQPVNC-ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSD 240
C + S D + +++ + L + D T +L +K H +C T+
Sbjct: 591 VAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKV 650
Query: 241 AHVTGGSEDGYIYFWD 256
+T G DG I WD
Sbjct: 651 --ITCGW-DGLIKLWD 663
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 72/271 (26%), Positives = 121/271 (44%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLW----NPHRGIHIKTYKSHGREVRDVHVTA 70
+ HE A R++ + G DR ++LW N + + S G + V +
Sbjct: 315 EAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAG--INSVDFDS 372
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
+ ++ D W V R+ GH +V A K+ + VV+ +D++L+ WD
Sbjct: 373 TGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQEPIKVVTGSHDRTLKIWD 432
Query: 131 CRSHSTEPIQII-DSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
RS + + S D V + L T II G D +R +DIR ++ +DD+ P +
Sbjct: 433 LRSIACIETKFAGSSCNDLVTTDSLGST-IISGHYDKKIRFWDIRTEKQ-ADDVLMPAKI 490
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG-- 245
+ +S D N ++ S D T++LLD +++ + + FK C + + +G
Sbjct: 491 TSLDLSKDCNYLICSVRDDTIKLLDLRKNQVISTFTN---EHFKISCDFARASFNSSGLK 547
Query: 246 ---GSEDGYIYFWDLVDASVVAKFKAHSLVV 273
GS DG IY W+ V+ + A K HS V
Sbjct: 548 IACGSADGAIYIWN-VNGFLEATLKGHSTAV 577
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV 152
+++ KF HE+E +AV+++ +V + G D+ ++ WD +STEP ++ + SV
Sbjct: 309 KILMKFEAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSV 368
Query: 153 CLTKTE--IIGGSVDGTVRTF---DIRVGRELSDDLGQPVNCISMSNDGNCILASCLDST 207
T I+G S D R + D R+ L+ G+ V + ++ D T
Sbjct: 369 DFDSTGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGK-VMAAKYVQEPIKVVTGSHDRT 427
Query: 208 LRLLD-RSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
L++ D RS + ++ G C T L ++ + G D I FWD+
Sbjct: 428 LKIWDLRSIACIETKFAGSSCNDLVTTDSLGST---IISGHYDKKIRFWDI 475
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 50/222 (22%), Positives = 90/222 (40%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL G + + F+ G Y L D R+W T H +V +
Sbjct: 357 VLSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQEP 416
Query: 73 SKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
K+++ DR + WD+ S + KF G + V + S ++S YD+ +R WD
Sbjct: 417 IKVVTGSHDRTLKIWDLRSIACIETKFAGSSCN-DLVTTDSLGSTIISGHYDKKIRFWDI 475
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELSDDLGQ--PV 187
R+ ++ + + S+ L+K +I D T++ D+R + +S + +
Sbjct: 476 RTEKQADDVLMPA---KITSLDLSKDCNYLICSVRDDTIKLLDLRKNQVISTFTNEHFKI 532
Query: 188 NC----ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
+C S ++ G I D + + + + G L KGH
Sbjct: 533 SCDFARASFNSSGLKIACGSADGAIYIWNVN-GFLEATLKGH 573
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 47/198 (23%), Positives = 94/198 (47%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L GH G V+AA++ + ++ DRT+++W+ I+T K G D+ VT D
Sbjct: 398 HTLTGHSGKVMAAKYVQEPIKVVTGSHDRTLKIWDLRSIACIET-KFAGSSCNDL-VTTD 455
Query: 72 N--SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+ S +IS D++I +WD+ T + +++ ++ ++ + ++ + D +++
Sbjct: 456 SLGSTIISGHYDKKIRFWDIRTEKQADDVL-MPAKITSLDLSKDCNYLICSVRDDTIKLL 514
Query: 130 DCRSHSTEPIQIIDSFQDSV----MSVCLTKTEIIGGSVDGTVRTFDIRVGRELS-DDLG 184
D R + + F+ S S + +I GS DG + +++ E +
Sbjct: 515 DLRKNQVISTFTNEHFKISCDFARASFNSSGLKIACGSADGAIYIWNVNGFLEATLKGHS 574
Query: 185 QPVNCISMSNDGNCILAS 202
VN +S S + N +LAS
Sbjct: 575 TAVNAVSWSPNNN-MLAS 591
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 232 (86.7 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 59/208 (28%), Positives = 99/208 (47%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
+E +L GH G V A F+ D NY LS +D T+RLW+ + YK H V D
Sbjct: 535 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 594
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ +S G DR W + +R F GH ++VN +++ S+ V + D+++R
Sbjct: 595 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRL 654
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
WD + + ++I + + S+ + + G+ DG V +DI G + + G
Sbjct: 655 WDVLNGNC--VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 712
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD 212
S+ S DG + + +D+T+RL D
Sbjct: 713 DTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 172 (65.6 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 59/227 (25%), Positives = 94/227 (41%)
Query: 43 RLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHE 102
R+ + +K H V + D + L+S D + W + T + ++GH
Sbjct: 527 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 586
Query: 103 SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE---- 158
V +F+ Y VS G+D+ R W H +P++I F + V T+
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLW-ATDHY-QPLRI---FAGHLADVNCTRYHPNSN 641
Query: 159 -IIGGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRST 215
+ GS D TVR +D+ G + G P++ ++ S +G + D + L D
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 701
Query: 216 GELLQEYKGHICKSFKTDCCLTNS-DAHV-TGGSEDGYIYFWDLVDA 260
G ++ E KGH T C L S D + GS D + WD V A
Sbjct: 702 GLMVGELKGHT----DTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 744
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 228 (85.3 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 69/258 (26%), Positives = 113/258 (43%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GNY LS G D+T +W+ H G + + H DV
Sbjct: 265 ASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVD-WQ 323
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
+N+ SC D I + R ++ F+GH +EVNA+K++ ++ S D +L+ W
Sbjct: 324 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS 383
Query: 131 -----C----RSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG--REL 179
C ++H E I S S + + S D TVR +D+ G
Sbjct: 384 MKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHT 443
Query: 180 SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239
+PV ++ S DG + + D + + + +G L+ Y+G F+ C
Sbjct: 444 LRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQG-TGGIFEV-CWNAQG 501
Query: 240 DAHVTGGSEDGYIYFWDL 257
D V + DG + DL
Sbjct: 502 DK-VGASASDGSVCVLDL 518
Score = 133 (51.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 59/239 (24%), Positives = 94/239 (39%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR-GIHIKTY------- 56
++P +A VL+GHE V +N + S D T R+WN + G T
Sbjct: 162 EIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCI 221
Query: 57 KSHGREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
+ G +V +DV NS L++ G D W G + H+ + A+K+
Sbjct: 222 REGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIW-TENGNLASTLGQHKGPIFALKW 280
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V T S D +
Sbjct: 281 NKKGNYILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 338
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I G +LASC D TL++ + + H
Sbjct: 339 VCRLGCDRPVKTFQGHTNEVNAIKWDPSG-MLLASCSDDMTLKIWSMKQDACVHNLQAH 396
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 48/194 (24%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ + D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 65/241 (26%), Positives = 109/241 (45%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V + F+ DG S D +IRLW+ R + K H R V V + D+
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK 123
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+L S G D++ W+V +GR + GH + + F+ S + + +D ++ WD R+
Sbjct: 124 QLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRA 183
Query: 134 HSTEPIQI--IDSFQDSVMSVCLTKTEIIG-GSVDGTVRTFDIRVGRELSDDLGQP--VN 188
ST + ++ ++ +C + + ++ GS D T+ + G VN
Sbjct: 184 -STPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVN 242
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG-----HICKSFKTDCCLTNSDAHV 243
++ S D + ++ T+++ D TG+ L+ KG H C F D L S A V
Sbjct: 243 SLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHAC-IFTPDGKLLVSGAAV 301
Query: 244 T 244
T
Sbjct: 302 T 302
Score = 192 (72.6 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 58/218 (26%), Positives = 91/218 (41%)
Query: 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI 76
H G V + F+ DG L+ D + +W G + H V+ + D +
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 77 SCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHST 136
S D I WDV+ + + +GH+ V V F+ S + S G+D+ W+ +S
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 137 EPIQI--IDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG------RELSDDLGQPVN 188
+ + DS Q S S T + GS D TV +D+R L G ++
Sbjct: 145 VHLLVGHCDSIQSSDFSP--TSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN-IS 201
Query: 189 CISMSNDGNCILAS-CLDSTLRLLDRSTGELLQEYKGH 225
C+ S G +LAS D T+ + +T L + KGH
Sbjct: 202 CLCYSASG--LLASGSWDKTICVWKPTTNNLPLQLKGH 237
Score = 153 (58.9 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 45/228 (19%), Positives = 92/228 (40%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNE 112
++ Y H EV + D L++ D ++ W +GR++ + GH V + F+
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP 78
Query: 113 YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRT 170
++ S+ D S+R WD ++ + ++ Q SV +V + ++ G D
Sbjct: 79 DGRLIASSSSDHSIRLWDVAR--SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 171 FDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228
++++ GR + +G + S + + DST+ + D + Y
Sbjct: 137 WEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGH 196
Query: 229 SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
+ C ++ + GS D I W ++ + K H++ V L
Sbjct: 197 TGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSL 244
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 38/179 (21%), Positives = 77/179 (43%)
Query: 5 DLPRTEA-NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREV 63
D+ R++ +VLKGH+ +V F+ D S G D+ +W G + H +
Sbjct: 96 DVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSI 155
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDV--STGRV-IRKFRGHESEVNAVKFNEYSSVVVSA 120
+ + + L + D + WD+ ST V GH ++ + ++ S ++ S
Sbjct: 156 QSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA-SGLLASG 214
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEI--IGGSVDGTVRTFDIRVGR 177
+D+++ W +++ P+Q+ V S+ + E+ TV+ +D G+
Sbjct: 215 SWDKTICVWKPTTNNL-PLQL-KGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGK 271
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 66/246 (26%), Positives = 118/246 (47%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSK 74
+GH+GAV ++RFN + L+ D T++LW+ G I + + H V+ + +NS+
Sbjct: 53 EGHKGAVWSSRFNSTASQALTASADYTVKLWDTLNGSEILSIE-HQSIVKTADFSNNNSR 111
Query: 75 LISCGGDRQIFYWDVSTGR-VIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCR 132
+++ G ++ + +D+ + + GH + + ++ ++ +V+S G D+ +R WD R
Sbjct: 112 VVTGGSEKILRIFDLERPNDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIWDLR 171
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTF-DIRVGRELSD-DLGQPVNCI 190
S + Q+ + S+ S+ +K + G TF D + L L VNC
Sbjct: 172 SGT----QVSLCAKSSITSMEFSKDRRFLVTTAGNEVTFWDAQSFYPLKVYSLPFDVNCA 227
Query: 191 SMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSD-AHVTGGSED 249
S+ D + +A D + + D STG ++ KGH +CC + D A GS D
Sbjct: 228 SLHPDNSKFIAGGSDFWVHVYDFSTGNEIEVNKGH---HGPVNCCRFSPDGASFASGSLD 284
Query: 250 GYIYFW 255
G I W
Sbjct: 285 GTIRLW 290
Score = 161 (61.7 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 58/265 (21%), Positives = 108/265 (40%)
Query: 13 VLKGHEGAVLAARF---NGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
+ GH V F N DG++ +S D + L N G I T++ H V
Sbjct: 6 ICSGHSRPVSDLSFSNENSDGSFIVSACLDGSPMLRNGENGDWIGTFEGHKGAVWSSRFN 65
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+ S+ ++ D + WD G I H+S V F+ +S VV+ G ++ LR +
Sbjct: 66 STASQALTASADYTVKLWDTLNGSEILSIE-HQSIVKTADFSNNNSRVVTGGSEKILRIF 124
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTE---IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
D +P+ I +++ + + ++ G +D +R +D+R G ++S
Sbjct: 125 DLE-RPNDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIWDLRSGTQVSLCAKSS 183
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSD--AHVT 244
+ + S D L + + + D + L+ Y F +C + D +
Sbjct: 184 ITSMEFSKDRR-FLVTTAGNEVTFWDAQSFYPLKVYS----LPFDVNCASLHPDNSKFIA 238
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAH 269
GGS D +++ +D + + K H
Sbjct: 239 GGS-DFWVHVYDFSTGNEIEVNKGH 262
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 227 (85.0 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 69/262 (26%), Positives = 118/262 (45%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GN+ LS G D+T +W+ H G + + H DV +
Sbjct: 259 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS 318
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R I+ F+GH +EVNA+K++ +++ S D +L+ W
Sbjct: 319 NNT-FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS 377
Query: 130 --------DCRSHSTEPIQIIDSFQD---SVMSVCLTKTEIIGGSVDGTVRTFDIRVG-- 176
D ++H+ E I S + + L + S D TVR +D+ G
Sbjct: 378 MKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGIC 437
Query: 177 -RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC 235
L+ +PV ++ S DG + + D + + + TG L+ Y+G + C
Sbjct: 438 IHTLTKHQ-EPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG---TGGIFEVC 493
Query: 236 LTNSDAHVTGGSEDGYIYFWDL 257
+ V + DG + DL
Sbjct: 494 WNAAGDKVGASASDGSVCVLDL 515
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 60/231 (25%), Positives = 99/231 (42%)
Query: 58 SHGREVRDVHVTADN-SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116
++G E H A+N + ++ GD +I + + RGHESEV +N S +
Sbjct: 131 ANGEE-NGAHTIANNHTDMMEVDGDVEI-----PPNKAV-VLRGHESEVFICAWNPVSDL 183
Query: 117 VVSAGYDQSLRAWDCRSHSTE-PIQII------DSFQDSVMSVCLTK-------TEIIGG 162
+ S D + R W+ +ST Q++ + QD + +T T + G
Sbjct: 184 LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATG 243
Query: 163 SVDGTVRTFDIRVGRELSDDLGQ---PVNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
S DG R + + G L+ LGQ P+ + + GN IL++ +D T + D TGE
Sbjct: 244 SYDGFARIWT-KDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK 301
Query: 220 QEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
Q++ H + D N+ A S D I+ L + F+ H+
Sbjct: 302 QQFPFHSAPALDVDWQSNNTFASC---STDMCIHVCKLGQDRPIKTFQGHT 349
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 57/239 (23%), Positives = 97/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-------IHIK-TY 56
++P +A VL+GHE V +N + S D T R+WN + ++
Sbjct: 156 EIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCI 215
Query: 57 KSHGREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
+ G++V +DV NS+ L++ G D W G + H+ + A+K+
Sbjct: 216 REGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKW 274
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGG-SVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V S D +
Sbjct: 275 NKKGNFILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I GN +LASC D TL++ + + + H
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDSCVHDLQAH 390
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 188 (71.2 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVEDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V + ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 149 (57.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVVSAG 121
+ SC D+ + W V+T + R HE V + + + YSS+ + G
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATG 298
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/194 (25%), Positives = 82/194 (42%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ ++++ G + G V + + DG ++ASC D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/102 (31%), Positives = 56/102 (54%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WDVSTG + GH++ V V F+ ++S D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ +++ + V S+ KT ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 82 (33.9 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
++ GS D T++ +D+ G L +G V + + G IL+ D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 371 RCMKTLNAH--EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 18/81 (22%), Positives = 32/81 (39%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ + + ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSL 386
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 227 (85.0 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 66/220 (30%), Positives = 106/220 (48%)
Query: 50 GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK 109
G + KT + H V + V DN L+S G DR++ W+++TG I RGH S V +K
Sbjct: 282 GENQKTLEGHVMGVWAM-VPWDNI-LVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLK 339
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVR 169
++ + +S D +LR WD R+ + + + Q SV + + ++ GS D T R
Sbjct: 340 MSD-KNTAISGSRDTTLRIWDLRTGTCRSVLV--GHQASVRCLAVHGDIVVSGSYDTTAR 396
Query: 170 TFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+ I GR L G +++ DG I LD+++R+ D +TG+ +GH
Sbjct: 397 VWSISEGRFLRALSGHFSQIYAIAFDGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLV 456
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
+ + D VTGGS DG + W L + + + AH
Sbjct: 457 GQLQM---SGDTLVTGGS-DGSVRVWSLTRMAPIHRLAAH 492
Score = 174 (66.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 51/209 (24%), Positives = 92/209 (44%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L+GH V + + D N +S +D T+R+W+ G H VR + V D
Sbjct: 327 LLRGHTSTVRCLKMS-DKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGDI 385
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
++S D W +S GR +R GH S++ A+ F+ + + D S+R WD
Sbjct: 386 --VVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFD--GRRIATGSLDTSVRIWDPN 441
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+ I + V + ++ ++ G DG+VR + + + + S+
Sbjct: 442 TGQCHAI--LQGHTSLVGQLQMSGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSL 499
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQE 221
D N I++ D +++ TG+LL+E
Sbjct: 500 QFDNNRIVSGGSDGRVKVWCLRTGQLLRE 528
Score = 167 (63.8 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+VL GH+ +V +GD +S D T R+W+ G ++ H ++ + A
Sbjct: 367 SVLVGHQASVRCLAVHGD--IVVSGSYDTTARVWSISEGRFLRALSGHFSQI---YAIAF 421
Query: 72 NSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
+ + I+ G D + WD +TG+ +GH S V ++ + +V+ G D S+R W
Sbjct: 422 DGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMS--GDTLVTGGSDGSVRVWS 479
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCI 190
+ PI + + +SV S+ I+ G DG V+ + +R G +L +L P + +
Sbjct: 480 LTRMA--PIHRLAAHDNSVTSLQFDNNRIVSGGSDGRVKVWCLRTG-QLLRELSTPSDTV 536
Score = 160 (61.4 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 62/255 (24%), Positives = 103/255 (40%)
Query: 3 VSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGRE 62
V D L+GH V A D N +S G DR +R+WN G I + H
Sbjct: 277 VYDTNGENQKTLEGHVMGVWAM-VPWD-NILVSGGCDREVRVWNMATGESIYLLRGHTST 334
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
VR + ++ D + IS D + WD+ TG GH++ V + + +VVS Y
Sbjct: 335 VRCLKMS-DKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAV--HGDIVVSGSY 391
Query: 123 DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD 182
D + R W ++ + + ++ I GS+D +VR +D G+ +
Sbjct: 392 DTTARVWSISEGRF--LRALSGHFSQIYAIAFDGRRIATGSLDTSVRIWDPNTGQCHAIL 449
Query: 183 LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
G + G+ ++ D ++R+ + + H + T N+
Sbjct: 450 QGHTSLVGQLQMSGDTLVTGGSDGSVRVWSLTRMAPIHRLAAH--DNSVTSLQFDNNRI- 506
Query: 243 VTGGSEDGYIYFWDL 257
V+GGS DG + W L
Sbjct: 507 VSGGS-DGRVKVWCL 520
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 30/118 (25%), Positives = 60/118 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L+GH V + +GD ++ G D ++R+W+ R I +H V + DN
Sbjct: 448 ILQGHTSLVGQLQMSGDT--LVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQF--DN 503
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS-LRAW 129
++++S G D ++ W + TG+++R+ V V F E +V++S+ ++ + W
Sbjct: 504 NRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVW 561
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 226 (84.6 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 72/279 (25%), Positives = 131/279 (46%)
Query: 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGRE------VRDVHVTA 70
HE V RF+ DG Y ++ G +R+ ++++ + G + + + +R V +
Sbjct: 298 HESVVCCVRFSADGKY-VATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIR-KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
D L + D+QI WD++T R IR +F GHE ++ ++ F + S D+++R W
Sbjct: 357 DGKYLATGAEDKQIRVWDITT-RTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLW 415
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTK-TEIIG-GSVDGTVRTFDIRVG----R-ELSDD 182
D + + + I+ D V +V ++ T+ + GS+D +VR +D+ G R E D
Sbjct: 416 DIENGTALTVFTIE---DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDG 472
Query: 183 LGQPVNCISMSNDGNCILASCLDSTLRLLDRST------------GELLQEYKGHICKSF 230
V ++ S +G ++ LD T++L + +T G ++ ++GH + F
Sbjct: 473 HKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGH--RDF 530
Query: 231 KTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
LT + V GS+D + FWD S + H
Sbjct: 531 VLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGH 569
Score = 151 (58.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GHE + + F DG S DRT+RLW+ G + + V V ++ D +K
Sbjct: 386 GHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDG-VTTVAISPD-TKY 443
Query: 76 ISCGG-DRQIFYWDVSTGRVIRKFRG---HESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++ G D+ + WD++ G + + G H+ V +V F+ +V+ D++++ W+
Sbjct: 444 VAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWEL 503
Query: 132 R----------SHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVG 176
S ++ + +D V+SV LT ++ GS D V+ +D R G
Sbjct: 504 ATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTG 560
Score = 123 (48.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWN---PHRGIH---------IKTYKSHGREV 63
GH+ +V + F+ +G ++ D+TI+LW P + +KT++ H V
Sbjct: 472 GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFV 531
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123
V +T DN ++S DR + +WD TG +GH++ V +V + + D
Sbjct: 532 LSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGD 591
Query: 124 QSLRAW 129
R W
Sbjct: 592 MRARIW 597
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 225 (84.3 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 74/279 (26%), Positives = 128/279 (45%)
Query: 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTY------KSHGREVRDVHVTA 70
H+ V RF+ DG Y L+ G +R+ ++++ G ++ KS +R V +
Sbjct: 268 HDSVVCCVRFSRDGKY-LATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D L + D+QI WD++T + F GHE ++ ++ F + S D+++R WD
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP-- 186
+ + S +D V +V ++ + GS+D TVR +D G L + L P
Sbjct: 387 IAEGKL--VYTL-SIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGY-LVERLENPDG 442
Query: 187 ----VNCISMSNDGNCILASCLDSTLRL----LDRST-------GELLQEYKGHICKSFK 231
V ++ + +G +++ LD T++L L R G+ + ++GH K F
Sbjct: 443 HKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGH--KDFV 500
Query: 232 TDCCLTNSDAH-VTGGSEDGYIYFWDLVDASVVAKFKAH 269
CLT D H V GS+D + FWD + + + H
Sbjct: 501 LSVCLT-PDGHWVMSGSKDRGVQFWDPITGNAQMMLQGH 538
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 55/219 (25%), Positives = 98/219 (44%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
RT ++ GHE + + F G+G Y S D+T+RLW+ G + T V V
Sbjct: 348 RTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTVA 406
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFR---GHESEVNAVKFNEYSSVVVSAGYDQ 124
++ D + + D+ + WD +TG ++ + GH+ V +V F +VS D+
Sbjct: 407 MSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDK 466
Query: 125 SLRAWDC----RSHST-----EPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDI 173
+++ W+ + +++ + + + +D V+SVCLT ++ GS D V+ +D
Sbjct: 467 TIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDP 526
Query: 174 RVGRELSDDLGQPVNCISM--SNDGNCILASCLDSTLRL 210
G G + IS+ S GN D R+
Sbjct: 527 ITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARI 565
Score = 115 (45.5 bits), Expect = 0.00073, P = 0.00073
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWN---PHR--------GIHIKTYKSHGREVR 64
GH+ +V + F +G +S D+TI+LW P + G +T++ H V
Sbjct: 442 GHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVL 501
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
V +T D ++S DR + +WD TG +GH++ V +V + ++ + D
Sbjct: 502 SVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDM 561
Query: 125 SLRAW 129
R W
Sbjct: 562 RARIW 566
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 223 (83.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 64/248 (25%), Positives = 115/248 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V + ++ DRTI++W+ G + H VR V V+ +
Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 258
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L SCG D+Q+ WD+ +VIR + GH S V + + V+V+ D + R WD R
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 133 SHSTEPIQIIDSFQDSVMSV-C-LTKTEIIGGSVDGTVRTFDIRVG--RELSDDLGQPVN 188
+ ++ + + ++V +V C + +II GS D T+R +D+ G R + + V
Sbjct: 319 TKAS--VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 376
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
+ + + + AS ++ G +Q GH + + N+D + G++
Sbjct: 377 AVVL-HPLHYTFASGSPDNIKQWKFPDGGFIQNLSGH---NAIINTLAVNTDGVLVSGAD 432
Query: 249 DGYIYFWD 256
+G ++ WD
Sbjct: 433 NGTMHLWD 440
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 47/211 (22%), Positives = 86/211 (40%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH AV + + ++C +D T R+W+ + T H V V A ++
Sbjct: 286 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 345
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS 135
I+ D I WD+ G+ H+ V AV + S D +++ W
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPD-NIKQWKFPDGG 404
Query: 136 TEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
IQ + S +++++ T+ ++ G+ +GT+ +D R G + V S+
Sbjct: 405 F--IQNL-SGHNAIINTLAVNTDGVLVSGADNGTMHLWDWRTGYNFQR-VHAAVQPGSLD 460
Query: 194 NDGNCILASCLD-STLRLLDRSTGELLQEYK 223
++ I A D S RLL + ++ Y+
Sbjct: 461 SESG-IFACAFDRSESRLLTAEADKTIKVYR 490
Score = 124 (48.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 44/175 (25%), Positives = 73/175 (41%)
Query: 8 RTEANV--LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
RT+A+V L GH AV R ++ D TIRLW+ G T +H + VR
Sbjct: 318 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 377
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
V V + G I W G I+ GH + +N + N V+VS + +
Sbjct: 378 V-VLHPLHYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNT-DGVLVSGADNGT 435
Query: 126 LRAWDCRS-------HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTF 171
+ WD R+ H+ +DS + + + ++E ++ D T++ +
Sbjct: 436 MHLWDWRTGYNFQRVHAAVQPGSLDS-ESGIFACAFDRSESRLLTAEADKTIKVY 489
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 186 (70.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDQTGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ + W+V+TG ++ F GH V V+ N+ +++ S DQ++R W
Sbjct: 205 DHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIG 161
+C++ E +++ + S T +E G
Sbjct: 265 TKECKAELREHEHVVECISWAPESAHPTISEATG 298
Score = 164 (62.8 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R ++ HE V ++ F++ S VV+ DQ+++ W+CR
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 37/126 (29%), Positives = 57/126 (45%)
Query: 6 LPRT-EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
+PR E L GH V F+ + +S +D TI++W+ G +T K H V+
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQ 154
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D+ L SC D I WD IR GH+ V++V +VSA D+
Sbjct: 155 DISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDK 214
Query: 125 SLRAWD 130
+++ W+
Sbjct: 215 TMKMWE 220
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 49/194 (25%), Positives = 81/194 (41%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD G R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F++ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCL-DSTLRLL 211
I+ S D T++ +++ G + G V + + DG +LASC D T+R+
Sbjct: 203 NGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGT-LLASCSNDQTVRVW 261
Query: 212 DRSTGELLQEYKGH 225
+T E E + H
Sbjct: 262 VVATKECKAELREH 275
Score = 131 (51.2 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L+S D+ I WD+STG + GH++ V V F+ VVS D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ + + + V S+ K ++ GSVD TV+ ++ R
Sbjct: 371 RC--MKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 81 (33.6 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCIS--MSNDGNCILASCLDS-TLRLLDRST 215
++ GS D T++ +DI G L +G N + + + G + SC D TLR+ D
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHD-NWVRGVLFHPGGRFVVSCADDKTLRIWDYKN 369
Query: 216 GELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 370 KRCMKTLSAH--EHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 19/81 (23%), Positives = 31/81 (38%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D STG L GH ++ V ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGH--DNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + + AH V L
Sbjct: 366 DYKNKRCMKTLSAHEHFVTSL 386
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 63/253 (24%), Positives = 116/253 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK-TYKSHGREVRDVHVTAD 71
V+ GH G V + + + DR I++W+ +K T H +RD+ ++
Sbjct: 281 VILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDL-ASCKLKLTLTGHINSIRDIKISKK 339
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
N L SCG D ++ WD+ +VIR + GH S V + + +++S G D +R WD
Sbjct: 340 NPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDI 399
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGR-ELS-DDLGQPV 187
R+ S+ + ++ +VMS+C E ++ GS D +R +D+ G+ +S + +
Sbjct: 400 RTKSS--VFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSI 457
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI----CKSFKTDCCLTNSDAHV 243
+S+ + SC +++ + E + G C K D +S +
Sbjct: 458 RSLSI-HPFEYSFCSCGTDNVKVWCGADAEFDRNITGFNSIINCSLIKQDPYFNDSSILI 516
Query: 244 TGGSEDGYIYFWD 256
G S +G ++F+D
Sbjct: 517 LG-SNNGQLHFYD 528
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 63/253 (24%), Positives = 116/253 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK-TYKSHGREVRDVHVTAD 71
V+ GH G V + + + DR I++W+ +K T H +RD+ ++
Sbjct: 281 VILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDL-ASCKLKLTLTGHINSIRDIKISKK 339
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
N L SCG D ++ WD+ +VIR + GH S V + + +++S G D +R WD
Sbjct: 340 NPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDI 399
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGR-ELS-DDLGQPV 187
R+ S+ + ++ +VMS+C E ++ GS D +R +D+ G+ +S + +
Sbjct: 400 RTKSS--VFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSI 457
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI----CKSFKTDCCLTNSDAHV 243
+S+ + SC +++ + E + G C K D +S +
Sbjct: 458 RSLSI-HPFEYSFCSCGTDNVKVWCGADAEFDRNITGFNSIINCSLIKQDPYFNDSSILI 516
Query: 244 TGGSEDGYIYFWD 256
G S +G ++F+D
Sbjct: 517 LG-SNNGQLHFYD 528
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 221 (82.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 66/261 (25%), Positives = 116/261 (44%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
A+ L H+G + A ++N GN+ LS G D+T +W+ H G + + H DV +
Sbjct: 255 ASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQS 314
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW- 129
+N+ SC D I + R I+ F+GH +EVNA+K++ +++ S D +L+ W
Sbjct: 315 NNT-FASCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWS 373
Query: 130 --------DCRSHSTEPIQIIDSFQDSVMSVCLTKTEII---GGSVDGTVRTFDIRVGRE 178
D ++HS E I + + ++ S D TVR +D G
Sbjct: 374 MKQDTCVHDLQAHSKEIYTI--KWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGAC 431
Query: 179 LSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCL 236
+ +PV ++ S DG + + D + + + +G L+ Y+G + C
Sbjct: 432 IHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRG---TGGIFEVCW 488
Query: 237 TNSDAHVTGGSEDGYIYFWDL 257
++ V + DG + DL
Sbjct: 489 NSTGDKVGASASDGSVCVLDL 509
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 60/239 (25%), Positives = 97/239 (40%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN---PHRGIHIKTYKSH-- 59
++P ++A VL+GHE V +N + S D T R+WN G + H
Sbjct: 152 EIPASKAMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCI 211
Query: 60 ---GREV---RDVHVTADNSK--LISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
G++V +DV NS+ L++ G D W G + H+ + A+K+
Sbjct: 212 REGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKW 270
Query: 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGG-SVDGTVR 169
N+ + ++SAG D++ WD +H+ E Q + V S D +
Sbjct: 271 NKKGNFILSAGVDKTTIIWD--AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 328
Query: 170 TFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGH 225
+ R + G VN I GN +LASC D TL+L + + + H
Sbjct: 329 VCKLGQERPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKLWSMKQDTCVHDLQAH 386
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 203 (76.5 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 71/271 (26%), Positives = 117/271 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + T T II GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQPVNCISM--SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G N S+ + DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
+ + + H+ G D IY DL
Sbjct: 253 EGVWALQ--VNEAFTHIYSGGRDRKIYCTDL 281
Score = 136 (52.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L G++ ++ + N G +S ++ +R+W+P + K H V+ + + D +
Sbjct: 164 LSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGT 223
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+ +S D I W + R I +R H+ V A++ NE + + S G D+ + D R+
Sbjct: 224 QCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTDLRN 283
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 50/234 (21%), Positives = 96/234 (41%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR---VIRKFRGHESEVNAVK 109
++ Y +G V + + ++L + G D I W V+ + I H VN +
Sbjct: 25 VEKYNRNG--VNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDII 82
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-EIIGGS-VDGT 167
++SA D +++ W+ +H + + + +D V ++ K E++ + +D
Sbjct: 83 LCCNGKTLISASSDTTVKVWN--AHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQ 140
Query: 168 VRTFDIRVGRELS--------DDLG---QPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
+ +D+ L+ L + ++M+ G I++ + LR+ D T
Sbjct: 141 IFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTC 200
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDA-HVTGGSEDGYIYFWDLVDASVVAKFKAH 269
L + KGH + K+ L N D GS DG I W L +A ++ H
Sbjct: 201 AKLMKLKGHT-DNVKS--LLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVH 251
Score = 44 (20.5 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 234 CCLTNSDAHVTGGSEDGYIYFWDLVDA 260
C + N H+ + + FWD++ A
Sbjct: 366 CHILNDKRHILTKDTNNSVAFWDVLKA 392
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 224 (83.9 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 56/202 (27%), Positives = 92/202 (45%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G V + F+ D Y LS +D+T+RLW+ + +YK H V DV +
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+ D+ W +R F GH ++V+ V F+ V + D++ R WD +
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVST 640
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCI--- 190
+ + + + ++VC + GS DG + +DI G+ L G N I
Sbjct: 641 GDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSL 700
Query: 191 SMSNDGNCILASCLDSTLRLLD 212
S S +GN +++ D T+R+ D
Sbjct: 701 SYSKEGNVLISGGADHTVRVWD 722
Score = 190 (71.9 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 55/212 (25%), Positives = 91/212 (42%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
KT H V + DN L+S D+ + W + T + ++GH V V F+
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTF 171
+A +DQ+ R W C H P++I + V V + GS D T R +
Sbjct: 579 GHYFATASHDQTARLWSC-DH-IYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMW 636
Query: 172 DIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
D+ G + LG PV I++ DG + D + + D TG+ L++ +GH +
Sbjct: 637 DVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNA 696
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDLVDAS 261
+ + ++GG+ D + WDL A+
Sbjct: 697 IYSLSYSKEGNVLISGGA-DHTVRVWDLKKAT 727
Score = 182 (69.1 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+ GH V F+ +G Y + D+T R+W+ G ++ + H V + V D
Sbjct: 604 IFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDG 663
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGH-ESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
L + D I WD+ TG+ +++ RGH ++ + ++ +++ +V++S G D ++R WD
Sbjct: 664 RWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
Query: 132 RSHSTEP 138
+ +TEP
Sbjct: 724 KKATTEP 730
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 42/176 (23%), Positives = 71/176 (40%)
Query: 100 GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE- 158
GH V + F+ + ++S D+++R W +H+ + V V +
Sbjct: 523 GHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTA--LVSYKGHNHPVWDVSFSPLGH 580
Query: 159 -IIGGSVDGTVRTFD---IRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRS 214
S D T R + I R + L V+C+S +G + D T R+ D S
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLND-VDCVSFHPNGCYVFTGSSDKTCRMWDVS 639
Query: 215 TGELLQEYKGHICKSFKTDCCLTNSDAH-VTGGSEDGYIYFWDLVDASVVAKFKAH 269
TG+ ++ + GH C D ++ GSEDG I WD+ + + + H
Sbjct: 640 TGDSVRLFLGHTAPVISIAVC---PDGRWLSTGSEDGIINVWDIGTGKRLKQMRGH 692
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 221 (82.9 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 64/274 (23%), Positives = 115/274 (41%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK---TYKSHGRE 62
+P A +L+ H V +F+ +G Y S KD+T +W HI T H +
Sbjct: 262 IPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKP 321
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF-RGHESEVNAVKFNEYSSVVVSAG 121
V + + D+ ++++CG + I WDV +G + + +G S ++ + + ++ AG
Sbjct: 322 VIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGII--AG 379
Query: 122 Y-DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRE 178
D+S+ WD E + V + +T ++ D + FD E
Sbjct: 380 MTDRSICMWDLDGREKECWK--GQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVE 437
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLD-RSTGELLQEYKGHICKSFKTDCCLT 237
+ + S+SND IL + L+ +RL + +++ YKGH F C
Sbjct: 438 RLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFG 497
Query: 238 N-SDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
A + GSED +Y W ++ + H+
Sbjct: 498 GYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHA 531
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 62/257 (24%), Positives = 109/257 (42%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L GH V+A ++ D L+CG + IR W+ G + Y+ G D
Sbjct: 313 HTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPD 372
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESE-VNAVKFNEYSSVVVSAGYDQSLRAWD 130
+I+ DR I WD+ GR ++G ++ V+ + + +VS D + +D
Sbjct: 373 GQGIIAGMTDRSICMWDLD-GREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD 431
Query: 131 CRSHSTEPI----QIIDSFQ----DSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD 182
R + E + +I SF + + V L EI +++G + G + S
Sbjct: 432 -REATVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRF 490
Query: 183 LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN-SDA 241
+ + +C I + DS + + RSTG+L+ E GH + +C + ++
Sbjct: 491 IIR--SCFGGYKQA-FIASGSEDSQVYIWHRSTGKLIVELPGH---AGAVNCVSWSPTNL 544
Query: 242 HV-TGGSEDGYIYFWDL 257
H+ S+DG I W L
Sbjct: 545 HMLASASDDGTIRIWGL 561
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 221 (82.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 47/146 (32%), Positives = 75/146 (51%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V GH V F+ + Y L+ D+T RLW+ HRG ++ + H + V V + D
Sbjct: 458 VFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDG 517
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC- 131
+ S + I WD+ TGR I+ RGH + ++ F+ S+V+VS G D ++RAWD
Sbjct: 518 HTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVF 577
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKT 157
+++ P+ S SV++ KT
Sbjct: 578 KTNYNNPVS--SSLTGSVVTPFSAKT 601
Score = 201 (75.8 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 56/204 (27%), Positives = 87/204 (42%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L H G V F+ D Y LSC +D + RLW+ + YK H V DV
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH 434
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC-R 132
+ D+ W +R F GH S+V+ V F+ S+ V++ D++ R WD R
Sbjct: 435 YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR 494
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD--GTVRTFDIRVGRELSDDLGQPVNC- 189
HS +++ + V +V + S D G + +DI GR + G N
Sbjct: 495 GHS---VRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIY 551
Query: 190 -ISMSNDGNCILASCLDSTLRLLD 212
+S S + +++ D T+R D
Sbjct: 552 SLSFSRESTVLVSGGSDCTVRAWD 575
Score = 191 (72.3 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
SH V + DN L+SC D W V T + ++GH V V F +
Sbjct: 377 SHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYF 436
Query: 118 VSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRV 175
+A +DQ+ + W C H P+++ V V ++ GS D T R +D+
Sbjct: 437 ATASHDQTAQLWSC-DH-IYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR 494
Query: 176 GRELSDDLG--QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTD 233
G + G QPV ++++ DG+ + ++ + + L D TG ++ +GH +
Sbjct: 495 GHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLS 554
Query: 234 CCLTNSDAHVTGGSEDGYIYFWDL 257
S V+GGS D + WD+
Sbjct: 555 FS-RESTVLVSGGS-DCTVRAWDV 576
Score = 160 (61.4 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 41/168 (24%), Positives = 75/168 (44%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
+T KGH G V F G+Y + D+T +LW+ ++ + H +V V
Sbjct: 411 KTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVT 470
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+++ +++ D+ WDV G +R F GH V AV + SA + +
Sbjct: 471 FHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIH 530
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDI 173
WD + I+ + + ++ S+ ++ T ++ G D TVR +D+
Sbjct: 531 LWDIGTGRR--IKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 219 (82.2 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 64/248 (25%), Positives = 114/248 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V + ++ DRTI++W+ G + H VR V V+ +
Sbjct: 198 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 257
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L SCG D+Q+ WD+ +VIR + GH S V + + V+V+ D + R WD R
Sbjct: 258 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVR 317
Query: 133 SHSTEPIQIIDSFQDSVMSV-C-LTKTEIIGGSVDGTVRTFDIRVG--RELSDDLGQPVN 188
+ ++ + + ++V +V C + +II GS D T+R +D+ G R + + V
Sbjct: 318 TKAS--VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 375
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
+ + + AS ++ G +Q GH + + N+D + G++
Sbjct: 376 AVVL-HPLLYTFASGSPDNIKQWKFPDGGFIQNLSGH---NAIINTLAVNADGVLVSGAD 431
Query: 249 DGYIYFWD 256
+G ++ WD
Sbjct: 432 NGTMHLWD 439
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 46/211 (21%), Positives = 85/211 (40%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH AV + + ++C +D T R+W+ + T H V V A ++
Sbjct: 285 GHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 344
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS 135
I+ D I WD+ G+ H+ V AV + S D +++ W
Sbjct: 345 ITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPD-NIKQWKFPDGG 403
Query: 136 TEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
IQ + S +++++ + ++ G+ +GT+ +D R G + V S+
Sbjct: 404 F--IQNL-SGHNAIINTLAVNADGVLVSGADNGTMHLWDWRTGYNFQR-VHAAVQPGSLD 459
Query: 194 NDGNCILASCLD-STLRLLDRSTGELLQEYK 223
++ I A D S RLL + ++ Y+
Sbjct: 460 SESG-IFACAFDRSESRLLTAEADKTIKVYR 489
Score = 123 (48.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 44/175 (25%), Positives = 73/175 (41%)
Query: 8 RTEANV--LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
RT+A+V L GH AV R ++ D TIRLW+ G T +H + VR
Sbjct: 317 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 376
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
V V + G I W G I+ GH + +N + N V+VS + +
Sbjct: 377 V-VLHPLLYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNA-DGVLVSGADNGT 434
Query: 126 LRAWDCRS-------HSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTF 171
+ WD R+ H+ +DS + + + ++E ++ D T++ +
Sbjct: 435 MHLWDWRTGYNFQRVHAAVQPGSLDS-ESGIFACAFDRSESRLLTAEADKTIKVY 488
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 216 (81.1 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 62/267 (23%), Positives = 117/267 (43%)
Query: 6 LPRT-EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
LPR E ++L GH + + +F+ + +S +D TI++W+ G +T K H V+
Sbjct: 93 LPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQ 152
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D+ + L SC D I WD T ++ GH+ V+ V+F ++S+ D+
Sbjct: 153 DIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDK 212
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDD 182
+++ W+ + I+ + +D V + +++ I S D T++T++I G
Sbjct: 213 TIKVWEAATGYC--IKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGE----- 265
Query: 183 LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
C++ + + ++ ST ++D G LL +G L +
Sbjct: 266 ------CLATYREHSHVVECLAFSTANIID-IPGSLLSTPEGKSKVKQGPGGNLVGQCGY 318
Query: 243 VTGGSEDGYIYFWDLVDASVVAKFKAH 269
+ GS D I W+L +A + H
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGH 345
Score = 195 (73.7 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 67/268 (25%), Positives = 107/268 (39%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
LKGH AV F+ GN SC D TI+LW+ +KT H V V T
Sbjct: 144 LKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGD 203
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
+LIS D+ I W+ +TG I+ GHE V + +E S + S DQ+++ W+
Sbjct: 204 QLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVK 263
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMS 193
E + V + + II + G++ G+ G N +
Sbjct: 264 G--ECLATYREHSHVVECLAFSTANII--DIPGSL--LSTPEGKSKVKQ-GPGGNLV--- 313
Query: 194 NDGNC--ILASCLDSTLRLLDRSTGELLQEYKGHI--CKSFKTDCCLTNSDAHVTGGSED 249
G C + D T+++ + +TG L Y GH ++ + C + +D
Sbjct: 314 --GQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPC----GKFLLSVGDD 367
Query: 250 GYIYFWDLVDASVVAKF-KAHSLVVKLL 276
I WD+ + +AH+ + L
Sbjct: 368 KTIRVWDIAQGRCIKTINEAHTHFISCL 395
Score = 130 (50.8 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 81 DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD-CRSHSTEPI 139
D+ I W+++TGR + + GH++ V AV+F+ ++S G D+++R WD + + I
Sbjct: 325 DKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTI 384
Query: 140 QIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
+ S + CL I G VD ++ + ++
Sbjct: 385 NEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 218 (81.8 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 64/249 (25%), Positives = 115/249 (46%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V + + ++ DRTI++W+ G + H VR V V+ +
Sbjct: 203 VISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRS 262
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L SCG D+Q+ WD+ +VIR + GH S V + + V+V+ D + R WD R
Sbjct: 263 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIR 322
Query: 133 SHSTEPIQIIDSFQDSVMSV-CLT-KTEIIG-GSVDGTVRTFDIRVG--RELSDDLGQPV 187
+ + + + ++V +V C + + +++ GS D T+R +D+ G R + + V
Sbjct: 323 TKAN--VHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSV 380
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
+ + + AS ++ G +Q GH + + NSD + G+
Sbjct: 381 RALVL-HPRQYTFASGSPDNIKQWKFPDGNFIQNLSGH---NAIINTLAVNSDGVLVSGA 436
Query: 248 EDGYIYFWD 256
++G I+ WD
Sbjct: 437 DNGTIHMWD 445
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 44/213 (20%), Positives = 88/213 (41%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH AV + + ++C +D T R+W+ ++ T H V V + ++
Sbjct: 290 GHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQV 349
Query: 76 ISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
++ G D I WD+ G+ H+ V A+ + S D +++ W
Sbjct: 350 VTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPD-NIKQWKFPDG 408
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELS--DDLGQPVNCI 190
+ IQ + S +++++ ++ ++ G+ +GT+ +D R G QP +
Sbjct: 409 NF--IQNL-SGHNAIINTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLD 465
Query: 191 SMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223
S S +C+ S RL+ + ++ YK
Sbjct: 466 SESGIFSCVFDQ---SESRLITAEADKTIKVYK 495
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 59/219 (26%), Positives = 111/219 (50%)
Query: 14 LKGHEGAVLA-ARFNGDGNYCLSCGKDRTIRLW------NPHRGIHIKTYKSHGREVRDV 66
L+GH G V + A + LS +D+T+ W + GI K++K H V+DV
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
++AD + +S DR + WD+ TG ++F GH+ +V +V + +VSA D+++
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTV 132
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDIRVGRELSDD 182
+ W+ E + + D V +V ++ ++ +I S D TV+++D+ +D
Sbjct: 133 KVWNTIG---ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADF 189
Query: 183 LGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
+G ++CI++S DG+ ++ D + L D + + L
Sbjct: 190 IGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTL 228
Score = 144 (55.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/235 (23%), Positives = 106/235 (45%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGG-DRQIFYWDVSTGR-----VIRK-FRGHESEVNA 107
T + H V + T + L+ G D+ + W ++ G + +K F+GH V
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 108 VKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVD 165
V + + +SA +D++LR WD + T Q + V+SV + K +I+ S D
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETT--QRFVGHKGDVLSVSIAKNLRQIVSASRD 129
Query: 166 GTVRTFDIRVGRELSDDLGQP--VNC--ISMSNDGNCILASCLDSTLRLLDRSTGELLQE 221
TV+ ++ +G ++ G V+ IS S+ + ++++ D T++ D + + +
Sbjct: 130 KTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNAD 188
Query: 222 YKGHICKSFKTDCCLTNSDAHVTGGS-EDGYIYFWDLVDASVV----AKFKAHSL 271
+ GH + C + D + + +DG I WDL + AK + H+L
Sbjct: 189 FIGH---TGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHAL 240
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 59/219 (26%), Positives = 111/219 (50%)
Query: 14 LKGHEGAVLA-ARFNGDGNYCLSCGKDRTIRLW------NPHRGIHIKTYKSHGREVRDV 66
L+GH G V + A + LS +D+T+ W + GI K++K H V+DV
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
++AD + +S DR + WD+ TG ++F GH+ +V +V + +VSA D+++
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTV 132
Query: 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDIRVGRELSDD 182
+ W+ E + + D V +V ++ ++ +I S D TV+++D+ +D
Sbjct: 133 KVWNTIG---ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADF 189
Query: 183 LGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
+G ++CI++S DG+ ++ D + L D + + L
Sbjct: 190 IGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTL 228
Score = 144 (55.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/235 (23%), Positives = 106/235 (45%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGG-DRQIFYWDVSTGR-----VIRK-FRGHESEVNA 107
T + H V + T + L+ G D+ + W ++ G + +K F+GH V
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 108 VKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVD 165
V + + +SA +D++LR WD + T Q + V+SV + K +I+ S D
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETT--QRFVGHKGDVLSVSIAKNLRQIVSASRD 129
Query: 166 GTVRTFDIRVGRELSDDLGQP--VNC--ISMSNDGNCILASCLDSTLRLLDRSTGELLQE 221
TV+ ++ +G ++ G V+ IS S+ + ++++ D T++ D + + +
Sbjct: 130 KTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNAD 188
Query: 222 YKGHICKSFKTDCCLTNSDAHVTGGS-EDGYIYFWDLVDASVV----AKFKAHSL 271
+ GH + C + D + + +DG I WDL + AK + H+L
Sbjct: 189 FIGH---TGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHAL 240
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 210 (79.0 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 54/210 (25%), Positives = 105/210 (50%)
Query: 14 LKGHEGAVLA-ARFNGDGNYCLSCGKDRTIRLW-----NPHRGIHIKTYKSHGREVRDVH 67
L+GH G V + A G N LS +D+T+ W + G+ ++++K H V+D
Sbjct: 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCT 72
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+TAD + +S D+ + WDV+TG ++F GH+S+V +V ++ +S+++S D++++
Sbjct: 73 LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK 132
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-----IIGGSVDGTVRTFDIRVGRELSDD 182
W + + + + V V K + II D V+ +++ + +D
Sbjct: 133 VWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF 192
Query: 183 LGQP--VNCISMSNDGNCILASCLDSTLRL 210
+G +N ++ S DG I ++ D + L
Sbjct: 193 IGHNSNINTLTASPDGTLIASAGKDGEIML 222
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/214 (23%), Positives = 96/214 (44%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT----AD 71
GH+ V++ + + +S +D+TI++W +G + T H V V V AD
Sbjct: 105 GHKSDVMSVDIDKKASMIISGSRDKTIKVWTI-KGQCLATLLGHNDWVSQVRVVPNEKAD 163
Query: 72 NSK--LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+ +IS G D+ + W+++ ++ F GH S +N + + +++ SAG D + W
Sbjct: 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLW 223
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGT-VRTFDIRVGRELSDDL----- 183
+ + + S QD V S+ + + T ++ F + + L DDL
Sbjct: 224 NL---AAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDP-QYLVDDLRPEFA 279
Query: 184 -----GQPVNCISM--SNDGNCILASCLDSTLRL 210
+P + +S+ S DG + A D+ +R+
Sbjct: 280 GYSKAAEP-HAVSLAWSADGQTLFAGYTDNVIRV 312
Score = 128 (50.1 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 59/239 (24%), Positives = 100/239 (41%)
Query: 55 TYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYW-----DVSTGRVIRKFRGHESEVNAV 108
T + H V + +A L+ S D+ + W D G +R F+GH V
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 109 KFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDG 166
+ +SA +D++LR WD + T Q + VMSV + K + II GS D
Sbjct: 72 TLTADGAYALSASWDKTLRLWDVATGET--YQRFVGHKSDVMSVDIDKKASMIISGSRDK 129
Query: 167 TVRTFDIRVGRELSDDLGQ-----PVNCI---SMSNDGNCILASCLDSTLRLLDRSTGEL 218
T++ + I+ G+ L+ LG V + +D I+++ D ++ + + ++
Sbjct: 130 TIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188
Query: 219 LQEYKGHICKSFKTDCCLTNS-DAH-VTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKL 275
++ GH + T LT S D + +DG I W+L + A V L
Sbjct: 189 EADFIGHN-SNINT---LTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSL 243
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 218 (81.8 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 67/260 (25%), Positives = 113/260 (43%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
+ +L GH G+VL ++ D +S D T+R+W+ G IKT H V +H+
Sbjct: 255 SRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAV--LHLRF 310
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
N +++C DR I WD+ + R I R GH + VN V F++ +VSA D++++
Sbjct: 311 ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDD--RYIVSASGDRTIK 368
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG--RELSDDLGQ 185
W + E ++ + + + + ++ GS D T+R +DI G + + +
Sbjct: 369 VWSM--DTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEE 426
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSD 240
V CI D I++ D +++ D + IC L D
Sbjct: 427 LVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDD 484
Query: 241 AHVTGGSEDGYIYFWDLVDA 260
+ S D I WD +DA
Sbjct: 485 FQIVSSSHDDTILIWDFLDA 504
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 58/240 (24%), Positives = 101/240 (42%)
Query: 27 NGDGNYCLS-------CG-KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISC 78
N G YCL G +D TI++W+ + H V + + DN +IS
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISG 278
Query: 79 GGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEP 138
D + WDV TG I+ H V ++F + ++V+ D+S+ WD S
Sbjct: 279 SSDATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDIT 336
Query: 139 IQ-IIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGN 197
I+ ++ + +V V I+ S D T++ + + + G + G
Sbjct: 337 IRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR 396
Query: 198 CILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
+++ D+T+RL D +G L+ +GH + C+ + + G+ DG I WDL
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHE----ELVRCIRFDEKRIVSGAYDGKIKVWDL 452
Score = 162 (62.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 7 PR--TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
PR T VL GH AV F D Y +S DRTI++W+ ++T H R +
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIA 389
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
+ ++S D I WD+ +G +R GHE V ++F+E +VS YD
Sbjct: 390 CLQYRG--RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDG 445
Query: 125 SLRAWDCRS 133
++ WD ++
Sbjct: 446 KIKVWDLQA 454
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 46/211 (21%), Positives = 91/211 (43%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD R GH V ++++ + V++S D ++R WD
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYD--NRVIISGSSDATVRVWD 288
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
+ E I+ + ++V+ + ++ S D ++ +D+ R+++ +G
Sbjct: 289 VETG--ECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRA 346
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ T E ++ GH + CL V
Sbjct: 347 AVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHR----RGIACLQYRGRLVVS 400
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + H +V+ +
Sbjct: 401 GSSDNTIRLWDIHSGVCLRVLEGHEELVRCI 431
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 218 (81.8 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 67/260 (25%), Positives = 113/260 (43%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA 70
+ +L GH G+VL ++ D +S D T+R+W+ G IKT H V +H+
Sbjct: 255 SRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAV--LHLRF 310
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
N +++C DR I WD+ + R I R GH + VN V F++ +VSA D++++
Sbjct: 311 ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDD--RYIVSASGDRTIK 368
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG--RELSDDLGQ 185
W + E ++ + + + + ++ GS D T+R +DI G + + +
Sbjct: 369 VWSM--DTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEE 426
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSD 240
V CI D I++ D +++ D + IC L D
Sbjct: 427 LVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDD 484
Query: 241 AHVTGGSEDGYIYFWDLVDA 260
+ S D I WD +DA
Sbjct: 485 FQIVSSSHDDTILIWDFLDA 504
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 58/240 (24%), Positives = 101/240 (42%)
Query: 27 NGDGNYCLS-------CG-KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISC 78
N G YCL G +D TI++W+ + H V + + DN +IS
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISG 278
Query: 79 GGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEP 138
D + WDV TG I+ H V ++F + ++V+ D+S+ WD S
Sbjct: 279 SSDATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDIT 336
Query: 139 IQ-IIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGN 197
I+ ++ + +V V I+ S D T++ + + + G + G
Sbjct: 337 IRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR 396
Query: 198 CILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
+++ D+T+RL D +G L+ +GH + C+ + + G+ DG I WDL
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHE----ELVRCIRFDEKRIVSGAYDGKIKVWDL 452
Score = 162 (62.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 7 PR--TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
PR T VL GH AV F D Y +S DRTI++W+ ++T H R +
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIA 389
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
+ ++S D I WD+ +G +R GHE V ++F+E +VS YD
Sbjct: 390 CLQYRG--RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDG 445
Query: 125 SLRAWDCRS 133
++ WD ++
Sbjct: 446 KIKVWDLQA 454
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 46/211 (21%), Positives = 91/211 (43%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD R GH V ++++ + V++S D ++R WD
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYD--NRVIISGSSDATVRVWD 288
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
+ E I+ + ++V+ + ++ S D ++ +D+ R+++ +G
Sbjct: 289 VETG--ECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRA 346
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ T E ++ GH + CL V
Sbjct: 347 AVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHR----RGIACLQYRGRLVVS 400
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + H +V+ +
Sbjct: 401 GSSDNTIRLWDIHSGVCLRVLEGHEELVRCI 431
>GENEDB_PFALCIPARUM|PFL0970w [details] [associations]
symbol:PFL0970w "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188
KO:K12816 HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 217 (81.4 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 65/277 (23%), Positives = 125/277 (45%)
Query: 7 PRTEANVLKGHEGAVLAARFNGD-GNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVR 64
P+ E + KGH+ V RF GNY LS D T++LW+ ++ I+TYK H + V+
Sbjct: 318 PKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYKGHFKGVK 377
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN-EYSSVVVSAGYD 123
DV D S +SC D + YWD G+ I+ + + N + ++ + G +
Sbjct: 378 DVLFDNDGSSFLSCSYDNNVIYWDTEYGK-IKGIYNQKKTPYCLCLNPDDTNTFLVGGAN 436
Query: 124 QSLRAWDCRSHSTEPIQIIDSFQD-SVMSVCLTKTEIIGGSVDGTVRTFDIR---VGREL 179
+ D R+ + E ++ + Q + +++C ++I S D + ++ V + +
Sbjct: 437 NKICHIDFRTGNIE-LEYNEHLQAINTITLCENNKKLISTSDDKKIFIWEYGLPVVVKYI 495
Query: 180 SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELL----QEYKGHICKSFKTDCC 235
SD + +S+ N L +++ + + + +TG+ + +KGH + +
Sbjct: 496 SDASMFSITSVSVHPSNNFFLCQSMNNVITVYE-ATGKFRLFSKKTFKGHHNIGYSINVS 554
Query: 236 LTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+N +V G +G ++ W+ KAH V
Sbjct: 555 CSNDGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNV 591
>UNIPROTKB|Q8I5L1 [details] [associations]
symbol:PFL0970w "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188 KO:K12816
HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 217 (81.4 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 65/277 (23%), Positives = 125/277 (45%)
Query: 7 PRTEANVLKGHEGAVLAARFNGD-GNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVR 64
P+ E + KGH+ V RF GNY LS D T++LW+ ++ I+TYK H + V+
Sbjct: 318 PKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYKGHFKGVK 377
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN-EYSSVVVSAGYD 123
DV D S +SC D + YWD G+ I+ + + N + ++ + G +
Sbjct: 378 DVLFDNDGSSFLSCSYDNNVIYWDTEYGK-IKGIYNQKKTPYCLCLNPDDTNTFLVGGAN 436
Query: 124 QSLRAWDCRSHSTEPIQIIDSFQD-SVMSVCLTKTEIIGGSVDGTVRTFDIR---VGREL 179
+ D R+ + E ++ + Q + +++C ++I S D + ++ V + +
Sbjct: 437 NKICHIDFRTGNIE-LEYNEHLQAINTITLCENNKKLISTSDDKKIFIWEYGLPVVVKYI 495
Query: 180 SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELL----QEYKGHICKSFKTDCC 235
SD + +S+ N L +++ + + + +TG+ + +KGH + +
Sbjct: 496 SDASMFSITSVSVHPSNNFFLCQSMNNVITVYE-ATGKFRLFSKKTFKGHHNIGYSINVS 554
Query: 236 LTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+N +V G +G ++ W+ KAH V
Sbjct: 555 CSNDGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNV 591
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 215 (80.7 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 60/247 (24%), Positives = 109/247 (44%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V+ GH G V A + + + D TI++W+ G T H +R + V++ +
Sbjct: 202 VISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRH 261
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L S G D ++ WD+ + + +R + GH V +V + V+ S G D +R WD R
Sbjct: 262 PYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMR 321
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCI 190
+ + I + + +++S+ + +I GS+D TV+ +D+ G +
Sbjct: 322 TRAN--IFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVR 379
Query: 191 SMS-NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249
SM ++ A+ ++ G ++ GH S L N+D + G ++
Sbjct: 380 SMVIHEKEYSFATGAADNIKQWKCPDGSFIKNLSGH--NSIINAMAL-NADNVLVSGGDN 436
Query: 250 GYIYFWD 256
G I FWD
Sbjct: 437 GSISFWD 443
Score = 159 (61.0 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 50/236 (21%), Positives = 99/236 (41%)
Query: 45 WNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESE 104
W+P + ++ H VR + V N + D I WD+++G + GH S
Sbjct: 193 WHPPWKL-MRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSA 251
Query: 105 VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-EII-GG 162
+ ++ + + S G D + WD S+ + ++ + V SV L T +++ G
Sbjct: 252 IRGLEVSSRHPYLFSVGEDNKVLCWDLESN--KQVRNYYGHRQGVYSVALHPTLDVLFSG 309
Query: 163 SVDGTVRTFDIRVGRELSDDLGQPVNCISMS--NDGNCILASCLDSTLRLLDRSTGELLQ 220
D VR +D+R + + G +S+ N +++ +D+T++L D +TG
Sbjct: 310 GRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAA 369
Query: 221 EYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
H K ++ + TG +++ I W D S + H+ ++ +
Sbjct: 370 TLTNHK-KGVRSMVIHEKEYSFATGAADN--IKQWKCPDGSFIKNLSGHNSIINAM 422
Score = 158 (60.7 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 8 RTEANV--LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
RT AN+ +KGH+G +L+ + +S D T++LW+ G T +H + VR
Sbjct: 321 RTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRS 380
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
+ V + + G I W G I+ GH S +NA+ N +V+VS G + S
Sbjct: 381 M-VIHEKEYSFATGAADNIKQWKCPDGSFIKNLSGHNSIINAMALNA-DNVLVSGGDNGS 438
Query: 126 LRAWDCRS 133
+ WD ++
Sbjct: 439 ISFWDWKT 446
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 208 (78.3 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 68/269 (25%), Positives = 125/269 (46%)
Query: 10 EANVLKGHEGAVLAARFNGDG-NYCLSCGKDRTIRLWN--P----HRGIHIKTYKSHGRE 62
E L GH G V + + + + +S +D+T+ +W P G ++ K H
Sbjct: 13 EVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHF 72
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
V+DV ++ D +S D + WD++ G R F+GH +V +V F+ + ++S
Sbjct: 73 VQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSR 132
Query: 123 DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR---VGR 177
D +++ W+ ++ ++ QD V + + I+ GS D V+ +DI+
Sbjct: 133 DATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNH 192
Query: 178 ELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLT 237
L+D G VN +++S DG+ + D+ L + S+G+ L YK ++ T L
Sbjct: 193 TLTDHTGY-VNTVTISPDGSLCASGGKDTFACLWELSSGKPL--YK---LEARNTINALA 246
Query: 238 NS-DAHVTGGSEDGYIYFWDLVDASVVAK 265
S + + + D I WDL+ V+A+
Sbjct: 247 FSPNKYWLSAATDDKIIIWDLLTKQVLAE 275
Score = 134 (52.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/238 (21%), Positives = 98/238 (41%)
Query: 51 IHIKTYKSHGREVRDVHVTADN-SKLISCGGDRQIFYWDV------STGRVIRKFRGHES 103
+ + + H V + V+ +N +IS D+ + W + S G+ R +GH
Sbjct: 12 LEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSH 71
Query: 104 EVNAVKFNEYSSVVVSAGYDQSLRAWDC-RSHSTEPIQIIDSFQDSVMSVCLTKT--EII 160
V V + +S +D +LR WD + ST ++ VMSV + +II
Sbjct: 72 FVQDVVISHDGQFALSGSWDNTLRLWDITKGVST---RLFKGHTQDVMSVAFSSDNRQII 128
Query: 161 GGSVDGTVRTFDIRVGRELSDDLGQP------VNCISMSNDGNCILASCLDSTLRLLDRS 214
GS D T++ ++ +G E L P V+CI S + I++ D+ +++ D
Sbjct: 129 SGSRDATIKVWNT-LG-ECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIK 186
Query: 215 TGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272
+ + H + ++ + G +D + W+L + K +A + +
Sbjct: 187 SFKCNHTLTDHT--GYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTI 242
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 220 (82.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 66/261 (25%), Positives = 119/261 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+LKGH F+ D ++ D T+RLWN G KT+ H V V +++D
Sbjct: 769 ILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDG 828
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY-DQSLRAWDC 131
+++S G + WD +TG +++ +V F+ S ++AG+ D + WD
Sbjct: 829 RQIVS-GSIEAVKLWDAATGDLLKTLAS--GFAGSVAFSP-DSRQIAAGFKDGKIFIWDA 884
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ ++ ++MS+ + +++ S D T++ +DI +G + + +G V
Sbjct: 885 AGTLQKTLE---RHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG-VQEAVGHSKHV 940
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247
+ +S DG I + D T++L D +TG+L + GH+ K L N V+ S
Sbjct: 941 TTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQI-VSCSS 999
Query: 248 EDGYIYFWDLVDASVVAKFKA 268
E + WD V F++
Sbjct: 1000 EA--VKIWDAATGKVQNSFES 1018
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 58/251 (23%), Positives = 109/251 (43%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH G VL+ + DG +S G ++LW+ G +KT S G V + D+ ++
Sbjct: 814 GHTGTVLSVAISSDGRQIVS-GSIEAVKLWDAATGDLLKTLAS-GF-AGSVAFSPDSRQI 870
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS 135
+ D +IF WD + G + + H + ++ F+ +V+ D +++ WD
Sbjct: 871 AAGFKDGKIFIWDAA-GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG 929
Query: 136 TEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG---RELSDDLGQPVNCISM 192
+ + S + M + I GS D T++ +D G + L+ L V +
Sbjct: 930 VQEA-VGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHL-DTVEKVVF 987
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
S D I+ SC +++ D +TG++ ++ T ++ H+ G +G I
Sbjct: 988 SLDNRQIV-SCSSEAVKIWDAATGKVQNSFESD---DVFTIVAVSPDGKHIASGHCNGRI 1043
Query: 253 YFWDLVDASVV 263
WD+ S++
Sbjct: 1044 KLWDMATGSLL 1054
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/230 (24%), Positives = 105/230 (45%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
+ DL +T A+ G G+V F+ D + KD I +W+ G KT + H
Sbjct: 845 ATGDLLKTLAS---GFAGSVA---FSPDSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPG 897
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + D +L++C D I WD++ G V ++ GH V + + V+ S
Sbjct: 898 AIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGV-QEAVGHSKHVTTMVLSPDGKVIASGS 956
Query: 122 YDQSLRAWDCRSHSTEPIQI--IDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGR-E 178
D++++ WD + + +D+ + V S L +I+ S + V+ +D G+ +
Sbjct: 957 ADKTIKLWDAATGDLQKTLTGHLDTVEKVVFS--LDNRQIVSCSSEA-VKIWDAATGKVQ 1013
Query: 179 LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228
S + +++S DG I + + ++L D +TG LL+ G+ K
Sbjct: 1014 NSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAGYRSK 1063
Score = 146 (56.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 60/252 (23%), Positives = 103/252 (40%)
Query: 23 AARFNGDGNYCLSCG--KDRT-IRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCG 79
A F+ D + G +D T I L++ G K K H E + ++D+ +L++
Sbjct: 734 AGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGS 793
Query: 80 GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPI 139
D + W+ +TG + + F GH V +V + +VS G ++++ WD +
Sbjct: 794 VDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVS-GSIEAVKLWDAATGDLLKT 852
Query: 140 QIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR--VGRELSDDLGQPVNCISMSNDGN 197
+ F SV + +I G DG + +D + + L G + I+ S D
Sbjct: 853 -LASGFAGSV-AFSPDSRQIAAGFKDGKIFIWDAAGTLQKTLERHPGA-IMSIAFSPDVK 909
Query: 198 CILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
++ DST++ D + G + QE GH T L+ + GS D I WD
Sbjct: 910 QLVTCSTDSTIKRWDITIGGV-QEAVGH--SKHVTTMVLSPDGKVIASGSADKTIKLWDA 966
Query: 258 VDASVVAKFKAH 269
+ H
Sbjct: 967 ATGDLQKTLTGH 978
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 215 (80.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 51/212 (24%), Positives = 100/212 (47%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
D +E L+GH G V F D + LSC +D T+R W+ + Y+ H V
Sbjct: 341 DASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVW 400
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
DV V+ + + DR W + +R + GH S+V+ VKF+ S+ + + D+
Sbjct: 401 DVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDK 460
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDD 182
++R W R ++ +++ + V+++ + + D ++ +D+ G D
Sbjct: 461 TVRLWSTRQGAS--VRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDL 518
Query: 183 LGQP--VNCISMSNDGNCILASCLDSTLRLLD 212
G ++ +S S D + + ++ +D+T+R+ D
Sbjct: 519 RGHTDTISSLSFSQDSSLVASASMDNTVRVWD 550
Score = 206 (77.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 37/124 (29%), Positives = 70/124 (56%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH V +F+ + NY + D+T+RLW+ +G ++ + H V + + + L
Sbjct: 436 GHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYL 495
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS-H 134
S G D+++ WD+++G + + RGH ++++ F++ SS+V SA D ++R WD R+ H
Sbjct: 496 ASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAH 555
Query: 135 STEP 138
+ P
Sbjct: 556 GSAP 559
Score = 179 (68.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 57/215 (26%), Positives = 91/215 (42%)
Query: 50 GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK 109
G IKT + H V D S L+SC D + YWD+ + +RGH V V
Sbjct: 344 GSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVD 403
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGT 167
+ S +A +D++ R W T P+++ V V I GS D T
Sbjct: 404 VSPCSLYFSTASHDRTARLWSFAR--TYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKT 461
Query: 168 VRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
VR + R G + G PV ++ S +G + ++ D L+L D ++G L ++ +GH
Sbjct: 462 VRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGH 521
Query: 226 ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260
+ + + V S D + WD+ +A
Sbjct: 522 T--DTISSLSFSQDSSLVASASMDNTVRVWDIRNA 554
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/232 (21%), Positives = 95/232 (40%)
Query: 53 IKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
+K + R+++ AD SK+ ++C + + ++G I+ RGH V F
Sbjct: 304 VKLWSLRARKLKAGPHKADVSKIRLACDVLEEEADDEDASGSEIKTLRGHSGPVYRTAFL 363
Query: 112 EYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQ--DSVMSVCL----TKTEIIGGSVD 165
+S ++S D ++R WD +S + + ++ D +S C T + +
Sbjct: 364 TDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLW 423
Query: 166 GTVRTFDIRV-GRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG 224
RT+ +R+ LSD V+C+ + N I D T+RL G ++ + G
Sbjct: 424 SFARTYPLRLYAGHLSD-----VDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTG 478
Query: 225 HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
H + + + ++ ED + WDL + + H+ + L
Sbjct: 479 H--RGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSL 528
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00059
Identities = 25/90 (27%), Positives = 41/90 (45%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH G VL F+ +G Y S G+D+ ++LW+ G K + H + + + D+S +
Sbjct: 478 GHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLV 537
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEV 105
S D + WD+ G SE+
Sbjct: 538 ASASMDNTVRVWDIRNAHGSAPTDGCSSEL 567
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 215 (80.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 68/278 (24%), Positives = 119/278 (42%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-IHIK-TYKSHGREV 63
+P T ++ H+G V A RF+ + G DR ++LW G K +
Sbjct: 305 VPSTALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGI 364
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123
+ + S L++ D W V R+ GH +V + +F ++ +VS YD
Sbjct: 365 TSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYD 424
Query: 124 QSLRAWDCRSH--STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGR-ELS 180
++L+ WD RS S + + S D V C T+ ++ G D VR +DI +
Sbjct: 425 RTLKLWDLRSKVCSMKTVFAGSSCNDIV---C-TEQCVMSGHFDKKVRFWDISYQNYHIQ 480
Query: 181 DDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEY--KGHICKSFKTDCCL 236
L + V + +++D +L D ++++D T + Q + +G C S T
Sbjct: 481 KQLNKLCRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGFKCGSDFTRVTF 540
Query: 237 TNSDAHVTGGSEDGYIYFWDLVDASVVAKF-KAHSLVV 273
+ + V GS DG +Y W+++ + K HS +
Sbjct: 541 SPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSAI 578
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 215 (80.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 65/271 (23%), Positives = 120/271 (44%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNP--HRGIHIKTYKSHGREV 63
+P T V H+G V A +F+ + G DR ++LW R + +
Sbjct: 310 VPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGI 369
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123
+ + S L++ D W V R+ GH +V + KF ++ +VS +D
Sbjct: 370 TSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHD 429
Query: 124 QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR---VGRELS 180
++L+ WD RS I+ + + VC T+ ++ G D +R +DIR + +EL
Sbjct: 430 RTLKLWDLRSKVCN-IKTVFAGSSCNDIVC-TEQCVMSGHFDKKIRFWDIRTESIVKEL- 486
Query: 181 DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEY--KGHICKSFKTDCCLTN 238
+ LG+ + + ++++ +L D L+++D G + Q + +G C S T +
Sbjct: 487 ELLGR-ITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSP 545
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
+V GS DG +Y W+++ + H
Sbjct: 546 DGNYVAAGSADGALYVWNVLTGKLERTLAKH 576
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 57/251 (22%), Positives = 101/251 (40%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L G + + F+ G+Y L+ D R+W T H +V DN+
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNA 421
Query: 74 KLISCGGDRQIFYWDVSTG--RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+++S DR + WD+ + + F G S N + E V+S +D+ +R WD
Sbjct: 422 RIVSGSHDRTLKLWDLRSKVCNIKTVFAG--SSCNDIVCTE--QCVMSGHFDKKIRFWDI 477
Query: 132 RSHS-TEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNC- 189
R+ S + ++++ + + + +TE++ S D ++ D+RVG Q C
Sbjct: 478 RTESIVKELELLGRI--TALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCG 535
Query: 190 -----ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
+ S DGN + A D L + + TG+L + H + + AHV
Sbjct: 536 SDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSPINA-VAWSPAGAHVV 594
Query: 245 GGSEDGYIYFW 255
+ W
Sbjct: 595 SVDKGNKAVLW 605
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTA 70
+ L GH G VL+A+F D +S DRT++LW+ + +IKT + G D+ T
Sbjct: 402 HTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCNIKTVFA-GSSCNDIVCT- 459
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
++S D++I +WD+ T ++++ + A+ N + +++ D L+ D
Sbjct: 460 -EQCVMSGHFDKKIRFWDIRTESIVKELE-LLGRITALDLNSERTELLTCSRDDLLKIID 517
Query: 131 CRSHSTEPIQIIDSFQ-DSVMSVCLTKTE---IIGGSVDGTVRTFDIRVG---RELSDDL 183
R + + F+ S + + + + GS DG + +++ G R L+
Sbjct: 518 LRVGAVKQTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHH 577
Query: 184 GQPVNCISMSNDG 196
P+N ++ S G
Sbjct: 578 SSPINAVAWSPAG 590
>POMBASE|SPAC4D7.05 [details] [associations]
symbol:sum1 "translation initiation factor eIF3i"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006413 "translational
initiation" evidence=IMP] [GO:0016282 "eukaryotic 43S preinitiation
complex" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0065007 "biological regulation" evidence=NAS]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IDA] [GO:0071541 "eukaryotic translation initiation
factor 3 complex, eIF3m" evidence=IDA] [GO:0003743 "translation
initiation factor activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC4D7.05 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0071470 GO:GO:0003743 GO:GO:0034399 GO:GO:0065007
GO:GO:0002183 GO:GO:0016282 GO:GO:0071540 GO:GO:0071541
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 OMA:ATVAGWS
OrthoDB:EOG44QX8Q EMBL:Y09529 EMBL:D89187 PIR:T38796 PIR:T42745
PIR:T46558 RefSeq:NP_594958.1 ProteinModelPortal:P79083
STRING:P79083 PRIDE:P79083 EnsemblFungi:SPAC4D7.05.1 GeneID:2543537
KEGG:spo:SPAC4D7.05 NextBio:20804546 Uniprot:P79083
Length = 328
Score = 198 (74.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 54/228 (23%), Positives = 108/228 (47%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L+GHE + ++N DG+ SC KD+ I +W H G + TY+ H + + +
Sbjct: 5 ILQGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSS 64
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSA-----GYDQSLR 127
+ ++S D + WDV TG+ + K+ + V V+FNE + +++ GY ++
Sbjct: 65 TLMVSGAADNTMRLWDVKTGKQLYKWE-FPTAVKRVEFNEDDTRILAVTEERMGYAGTVT 123
Query: 128 AW-----DCRSHSTEPIQIIDSFQDSVMSVC----LTKTEIIGGSVDGTVRTFDIRVGRE 178
+ + + + P+ +I + ++S +V L+K + G DG+V +D G
Sbjct: 124 VFRVPISESDAAAETPLYVITT-RESKATVAGWSYLSKF-LFTGHEDGSVSRYDAITGEF 181
Query: 179 LSD----DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEY 222
+ + G + + D + SC D+T + +D + E+++ Y
Sbjct: 182 VESKQVHNSGSTITDLQFYPDRTYFITSCKDTTAKAIDVDSFEVIKTY 229
Score = 108 (43.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 46/195 (23%), Positives = 82/195 (42%)
Query: 57 KSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116
+ H R + + D L SC D+ I W G + + GH + N+ S++
Sbjct: 7 QGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTL 66
Query: 117 VVSAGYDQSLRAWDCRS----HSTE-PIQI--IDSFQDSVMSVCLTKTEIIGGSVDGTVR 169
+VS D ++R WD ++ + E P + ++ +D + +T+ E +G + GTV
Sbjct: 67 MVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRVEFNEDDTRILAVTE-ERMGYA--GTVT 123
Query: 170 TFDIRVGRELSDDLGQ-PVNCISMSND-----GNCILASCL-----DSTLRLLDRSTGEL 218
F + + SD + P+ I+ G L+ L D ++ D TGE
Sbjct: 124 VFRVPISE--SDAAAETPLYVITTRESKATVAGWSYLSKFLFTGHEDGSVSRYDAITGEF 181
Query: 219 LQEYKGHICKSFKTD 233
++ + H S TD
Sbjct: 182 VESKQVHNSGSTITD 196
Score = 43 (20.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI--YFWD 256
E L KGH T + +GG EDGY+ +F+D
Sbjct: 279 EELGRVKGHF-GPINTIAVHPKGTGYASGG-EDGYVRVHFFD 318
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 213 (80.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 67/273 (24%), Positives = 120/273 (43%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPH-RGIHIK-TYKSHGREV 63
+P T V H+G V A +F+ + G DR ++LW K + +
Sbjct: 310 VPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGI 369
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123
+ + S L++ D W V R+ GH +V + KF ++ +VS +D
Sbjct: 370 TSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHD 429
Query: 124 QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR---VGRELS 180
++L+ WD RS S + + VC T+ ++ G D +R +DIR + RE+
Sbjct: 430 RTLKLWDLRSKVCIKTVFAGSSCNDI--VC-TEQCVMSGHFDKKIRFWDIRSESIVREM- 485
Query: 181 DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK--GHICKSFKTDCCLTN 238
+ LG+ + + ++ + +L+ D L+++D T + Q + G C S T +
Sbjct: 486 ELLGK-ITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSP 544
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKF-KAHS 270
++V GS +G +Y W ++ V K HS
Sbjct: 545 DGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHS 577
Score = 142 (55.0 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 45/197 (22%), Positives = 93/197 (47%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L GH G VL+A+F D +S DRT++LW+ + IKT + G D+ T
Sbjct: 402 HTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFA-GSSCNDIVCT-- 458
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D++I +WD+ + ++R+ ++ A+ N + ++S D L+ D
Sbjct: 459 EQCVMSGHFDKKIRFWDIRSESIVREME-LLGKITALDLNPERTELLSCSRDDLLKVIDL 517
Query: 132 RSHSTEPIQIIDSFQ--DSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRE---LSDDLG 184
R+++ + F+ V + + + GS +G++ + + G+ LS
Sbjct: 518 RTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHS 577
Query: 185 QPVNCISMSNDGNCILA 201
+N ++ S G+ +++
Sbjct: 578 SSINAVAWSPSGSHVVS 594
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 211 (79.3 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 74/291 (25%), Positives = 127/291 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHRGIHIKTYKS 58
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKDPYIASMEH 72
Query: 59 HGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVV 118
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 132
Query: 119 SAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVR 169
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +R
Sbjct: 133 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLR 192
Query: 170 TFDIRVGRELSDDLGQPVNCISM--SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHIC 227
+D R +L G N S+ + DG L+ D T+RL + Y+ H
Sbjct: 193 VWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDE 252
Query: 228 KSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + + HV G D IY DL + + + + KA L ++L
Sbjct: 253 GVWALQ--VNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 301
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 212 (79.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 67/273 (24%), Positives = 121/273 (44%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-IHIK-TYKSHGREV 63
+P T + V H+G V A +F+ + G DR ++LW K + +
Sbjct: 310 VPTTASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGI 369
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123
+ + + L++ D W V R+ GH +V + KF ++ +VS +D
Sbjct: 370 TSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHD 429
Query: 124 QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR---VGRELS 180
++L+ WD RS S + + VC T+ ++ G D +R +DIR V RE+
Sbjct: 430 RTLKLWDLRSKVCIKTVFAGSSCNDI--VC-TEQCVMSGHFDKKIRFWDIRSESVVREM- 485
Query: 181 DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK--GHICKSFKTDCCLTN 238
+ LG+ + + ++ + +L+ D L+++D T + Q + G C S T +
Sbjct: 486 ELLGK-ITALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSP 544
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKF-KAHS 270
++V GS +G +Y W ++ V K HS
Sbjct: 545 DGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHS 577
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 45/192 (23%), Positives = 89/192 (46%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L GH G VL+A+F D +S DRT++LW+ + IKT + G D+ T
Sbjct: 402 HTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFA-GSSCNDIVCT-- 458
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D++I +WD+ + V+R+ ++ A+ N + ++S D L+ D
Sbjct: 459 EQCVMSGHFDKKIRFWDIRSESVVREME-LLGKITALDLNPERTELLSCSRDDLLKVIDL 517
Query: 132 RSHSTEPIQIIDSFQ--DSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRE---LSDDLG 184
R+++ + F+ V + + + GS +G++ + + G+ LS
Sbjct: 518 RTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHS 577
Query: 185 QPVNCISMSNDG 196
+N ++ + G
Sbjct: 578 SSINAVAWAPSG 589
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 212 (79.7 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 66/273 (24%), Positives = 115/273 (42%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65
LP GH + FN GN + G D+ +++W+ G T + +
Sbjct: 312 LPSKAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVS 371
Query: 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125
V + ++ ++ D W+ GR GH +V KF S+ VV+ +D++
Sbjct: 372 VSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFIN-SNRVVTGSHDRT 430
Query: 126 LRAWDC-RSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRE---LSD 181
++ WD + + T I S D V+ + + T + G VD +VR +D G LS
Sbjct: 431 IKLWDLQKGYCTRTIFCFSSCNDLVI-LGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSS 489
Query: 182 -DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK--TDCCLTN 238
GQ + + + N IL + D TL+++D T + ++ +K ++ T +
Sbjct: 490 IHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGLNWTKASWSP 549
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKF-KAHS 270
++ GS DG I WD + V K H+
Sbjct: 550 DGRYIASGSIDGSICIWDATNGKTVKVLTKVHN 582
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 211 (79.3 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 39/127 (30%), Positives = 71/127 (55%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+ GH V +F+ + NY + D+T+RLW+ +G ++ + H VR + + +
Sbjct: 418 IYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNG 477
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L+S G D+ + WD+++G + + GH ++ +V F+ SSV+ SA D S+R WD +
Sbjct: 478 QYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIK 537
Query: 133 S-HSTEP 138
S H++ P
Sbjct: 538 SKHNSTP 544
Score = 188 (71.2 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 49/212 (23%), Positives = 96/212 (45%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
D TE VL GH G V + RF D + LSC +D +IR W+ + Y+ H V
Sbjct: 326 DRTATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVW 385
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D+ ++ + S D W +R + GH + V+ VKF+ S+ + + D+
Sbjct: 386 DLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDK 445
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDD 182
++R W + ++ +++ V + + ++ D ++ +D+ G D
Sbjct: 446 TVRLWSAQQGNS--VRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL 503
Query: 183 LGQP--VNCISMSNDGNCILASCLDSTLRLLD 212
G + ++ S D + I ++ +D+++R+ D
Sbjct: 504 HGHTDDITSVTFSLDSSVIASASMDNSVRIWD 535
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 55/208 (26%), Positives = 87/208 (41%)
Query: 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY 113
K H V D+S L+SC D I YWD+ + ++GH V + + +
Sbjct: 333 KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPH 392
Query: 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTF 171
S SA YD + R W T P++I V V + GS D TVR +
Sbjct: 393 SLFFASASYDHTARLWSF--DRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLW 450
Query: 172 DIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+ G + G PV C++ S +G ++++ D L+L D ++G L ++ GH
Sbjct: 451 SAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDI 510
Query: 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
L +S + S D + WD+
Sbjct: 511 TSVTFSLDSSV--IASASMDNSVRIWDI 536
Score = 162 (62.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 46/168 (27%), Positives = 73/168 (43%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
T + +GH V + + S D T RLW+ R ++ Y H V V
Sbjct: 372 TNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKF 431
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+++ L + D+ + W G +R F GH V + F+ +VSAG DQ L+
Sbjct: 432 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKL 491
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVC--LTKTEIIGGSVDGTVRTFDIR 174
WD S + + + D + SV L + I S+D +VR +DI+
Sbjct: 492 WDLASGTL--YKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIK 537
Score = 124 (48.7 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH G V F+ +G Y +S G+D+ ++LW+ G K H ++ V + D+S +
Sbjct: 463 GHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVI 522
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
S D + WD+ + G SE+ V + S+V+
Sbjct: 523 ASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVL 564
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 55/243 (22%), Positives = 95/243 (39%)
Query: 31 NYCLSCG-KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
N L+ G + +I+LW+ K+ K H +V +H+ D ++ DR
Sbjct: 280 NKLLATGLNNSSIKLWSLTS--KFKS-KPHQIDVSHIHLINDTLEVDE--EDR------T 328
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSV 149
+T R + GH V + +F SS ++S D S+R WD S + + ++
Sbjct: 329 ATERKV--LLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWD 386
Query: 150 MSVCLTKTEIIGGSVDGTVR--TFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDST 207
+ + S D T R +FD + V+C+ + N + D T
Sbjct: 387 LDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKT 446
Query: 208 LRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFK 267
+RL G ++ + GH C + N V+ G ED + WDL ++
Sbjct: 447 VRLWSAQQGNSVRLFTGH-CGPVRCLAFSPNGQYLVSAG-EDQLLKLWDLASGTLYKDLH 504
Query: 268 AHS 270
H+
Sbjct: 505 GHT 507
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 208 (78.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 59/251 (23%), Positives = 112/251 (44%)
Query: 11 ANVLKGHEGAVLAARFNG-DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT 69
+ V+ GH G V + D + ++ D T+++W+ G T H VRDV V+
Sbjct: 132 SRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVS 191
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+ L S D+ + WD+ ++IR + GH S V V + ++ +AG D ++ W
Sbjct: 192 DRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLW 251
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELS--DDLGQ 185
D R+ P+ + + + V T + ++ S D TVR +D+ G+ + +
Sbjct: 252 DMRTRI--PVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKR 309
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
V ++ + ++C D +R + G LL ++ K+ + N D +
Sbjct: 310 SVRATALHPKEFSVASACTDD-IRSWGLAEGSLLTNFESE--KTGIINTLSINQDDVLFA 366
Query: 246 GSEDGYIYFWD 256
G ++G + F+D
Sbjct: 367 GGDNGVLSFYD 377
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 210 (79.0 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 63/271 (23%), Positives = 119/271 (43%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-IHIK-TYKSHGREV 63
+P T +V H+G V A +F+ + G DR ++LW K + +
Sbjct: 326 VPTTAMSVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGI 385
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123
+ + S L++ D W V R+ GH +V + KF ++ +VS +D
Sbjct: 386 TSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHD 445
Query: 124 QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR---VGRELS 180
++L+ WD RS S + + VC T+ ++ G D +R +DIR + RE+
Sbjct: 446 RTLKLWDLRSKVCIKTVFAGSSCNDI--VC-TEQCVMSGHFDKKIRFWDIRSESIVREM- 501
Query: 181 DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK--GHICKSFKTDCCLTN 238
+ LG+ + + ++ + +L+ D L+++D + Q + G C S T +
Sbjct: 502 ELLGK-ITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRAVFSP 560
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
++V G+ +G +Y W+++ V H
Sbjct: 561 DGSYVAAGAAEGSLYIWNVLSGKVEKVLSKH 591
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 55/252 (21%), Positives = 105/252 (41%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHRGIHIKTYKSHGREVRDVHVTAD 71
L G + + F+ G+Y L+ D R+W + +R H T H +V D
Sbjct: 378 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRH--TLTGHSGKVLSAKFLLD 435
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRK-FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
N++++S DR + WD+ + I+ F G S N + E V+S +D+ +R WD
Sbjct: 436 NARIVSGSHDRTLKLWDLRSKVCIKTVFAG--SSCNDIVCTE--QCVMSGHFDKKIRFWD 491
Query: 131 CRSHS-TEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNC 189
RS S ++++ + + + +TE++ S D ++ D+R+ C
Sbjct: 492 IRSESIVREMELLGKI--TALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKC 549
Query: 190 IS------MSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHV 243
S S DG+ + A + +L + + +G++ + H S + + +HV
Sbjct: 550 GSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINA-VAWSPAGSHV 608
Query: 244 TGGSEDGYIYFW 255
+ W
Sbjct: 609 VTVDKGSKAVLW 620
Score = 135 (52.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 45/196 (22%), Positives = 93/196 (47%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L GH G VL+A+F D +S DRT++LW+ + IKT + G D+ T
Sbjct: 418 HTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFA-GSSCNDIVCT-- 474
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D++I +WD+ + ++R+ ++ A+ N + ++S D L+ D
Sbjct: 475 EQCVMSGHFDKKIRFWDIRSESIVREME-LLGKITALDLNPERTELLSCSRDDLLKIIDL 533
Query: 132 RSHSTEPIQIIDSFQ---DSVMSVCLTK-TEIIGGSVDGTVRTFDI---RVGRELSDDLG 184
R ++ F+ D +V + + G+ +G++ +++ +V + LS
Sbjct: 534 RINAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHS 593
Query: 185 QPVNCISMSNDGNCIL 200
+N ++ S G+ ++
Sbjct: 594 SSINAVAWSPAGSHVV 609
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 209 (78.6 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 65/277 (23%), Positives = 122/277 (44%)
Query: 6 LPRTEANVLKGH-EGAVLAARFNGDGNYCLSCGKDRTIRLWNPH-RGIHIKTYKSHGREV 63
+P+ + +GH +G F + LSC D I+LW + R ++TY H V
Sbjct: 263 VPKKLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPV 322
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGY 122
R+V + ++ +S DR + WD TG+V ++F GH ++ + + G
Sbjct: 323 REVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRFHTGHVPYCLKYHPDDDKNHMFLVGM 382
Query: 123 -DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFD--IRVGR 177
++ + WD RS E +Q D +V S+ S D +VR ++ I V
Sbjct: 383 QNKKIIQWDSRSG--EIVQEYDRHLQAVNSITFFDKNRRFASTSDDKSVRIWEWEIPVDT 440
Query: 178 ELSDDLG-QPVNCISMSNDGNCILASCLDSTLRLL----DRSTGELLQEYKGHICKSFKT 232
+L ++G + ++ S + ++ C+D+ + L D+ + ++GH +
Sbjct: 441 KLIQNVGLHAIPTMTKSPNDKWVVGQCMDNRIVLFQLVDDKLRFSKKKAFRGHNAAGYAC 500
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
+ + + + G DG ++ WD +V K+KAH
Sbjct: 501 NIDFSPDQSFLISGDADGKLFIWDWRTHKIVGKWKAH 537
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 208 (78.3 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ +N
Sbjct: 239 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAV--LHLRFNN 294
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 295 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 352
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 353 N--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 410
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + G +C + L +
Sbjct: 411 RCIRFDNKR--IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 468
Query: 243 VTGGSEDGYIYFWDLVD 259
+ S D I WD ++
Sbjct: 469 IVSSSHDDTILIWDFLN 485
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 278 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 333
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W+ ST +R GH+ + +++ + +VVS D ++R
Sbjct: 334 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 391
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 392 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 434
Score = 150 (57.9 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 51/241 (21%), Positives = 106/241 (43%)
Query: 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
+D TI++W+ + H V + + D +I+ D + WDV+ G ++
Sbjct: 222 RDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNT 279
Query: 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTK 156
H V ++FN + ++V+ D+S+ WD S + ++ ++ + +V V
Sbjct: 280 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 337
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
I+ S D T++ ++ + G + +++ D+T+RL D G
Sbjct: 338 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 397
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
L+ +GH + C+ + + G+ DG I WDL+ A++ + A +L ++ L
Sbjct: 398 ACLRVLEGHE----ELVRCIRFDNKRIVSGAYDGKIKVWDLM-AALDPRAPAGTLCLRTL 452
Query: 277 L 277
+
Sbjct: 453 V 453
Score = 146 (56.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 49/211 (23%), Positives = 97/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD ST R GH V ++++E V+++ D ++R WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 270
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + ++ S D ++ +D+ +++ +G
Sbjct: 271 V--NAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ + ST E ++ GH K + CL D V
Sbjct: 329 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 382
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 383 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 413
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 209 (78.6 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 39/127 (30%), Positives = 70/127 (55%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+ GH V +F+ + NY + D+T+RLW+ +G ++ + H V + + +
Sbjct: 417 IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG 476
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L S G D+++ WD+++G + ++ RGH + ++ F+ SS+V SA D S+R WD R
Sbjct: 477 KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIR 536
Query: 133 S-HSTEP 138
S H + P
Sbjct: 537 SSHCSTP 543
Score = 205 (77.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 52/212 (24%), Positives = 103/212 (48%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
TE VL+GH G V + RF D + LSC +D +IR W+ + Y+ H V D+ +
Sbjct: 329 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 388
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ + S DR W +R + GH ++V+ VKF+ S+ + + D+++R
Sbjct: 389 SPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 448
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
W + ++ +++ + V+S+ + + D ++ +D+ G + G
Sbjct: 449 WSTQQGNS--VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 506
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD-RST 215
N S+ S D + + ++ +D+++R+ D RS+
Sbjct: 507 DNITSLTFSPDSSLVASASMDNSVRVWDIRSS 538
Score = 183 (69.5 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 56/212 (26%), Positives = 91/212 (42%)
Query: 50 GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK 109
G +K + H V AD+S L+SC D I YWD+ + ++GH V +
Sbjct: 328 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 387
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGT 167
+ +S SA +D++ R W T P++I V V + GS D T
Sbjct: 388 ISPHSLYFASASHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 445
Query: 168 VRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
VR + + G + G PV ++ S +G + ++ D L+L D ++G L +E +GH
Sbjct: 446 VRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGH 505
Query: 226 ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T + + V S D + WD+
Sbjct: 506 TDNI--TSLTFSPDSSLVASASMDNSVRVWDI 535
Score = 133 (51.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH G VL+ F+ +G Y S G+D+ ++LW+ G K + H + + + D+S +
Sbjct: 462 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLV 521
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
S D + WD+ + G SE+ V + S+V+
Sbjct: 522 ASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVL 563
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/240 (21%), Positives = 97/240 (40%)
Query: 34 LSCGKDRT-IRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG 92
L+ G D + I+LW+ R +K+ + H +V +H+ D + D D + G
Sbjct: 279 LAAGFDNSCIKLWSL-RSKKLKS-EPHQVDVSRIHLACD---FLEEEDDE-----DDNLG 328
Query: 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV 152
++ RGH V + +F SS ++S D S+R WD S + + ++ + +
Sbjct: 329 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 388
Query: 153 CLTKTEIIGGSVDGTVR--TFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRL 210
S D T R +FD + V+C+ + N + D T+RL
Sbjct: 389 SPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 448
Query: 211 LDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
G ++ + GH + + + ++ ED + WDL ++ + + H+
Sbjct: 449 WSTQQGNSVRLFTGH--RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 506
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 207 (77.9 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ +N
Sbjct: 239 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNN 294
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 295 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 352
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 353 N--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 410
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + G +C + L +
Sbjct: 411 RCIRFDNKR--IVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 468
Query: 243 VTGGSEDGYIYFWDLVD 259
+ S D I WD ++
Sbjct: 469 IVSSSHDDTILIWDFLN 485
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 278 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 333
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W+ ST +R GH+ + +++ + +VVS D ++R
Sbjct: 334 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 391
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 392 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 434
Score = 157 (60.3 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 52/241 (21%), Positives = 107/241 (44%)
Query: 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
+D TI++W+ + H V + + D +I+ D + WDV+TG ++
Sbjct: 222 RDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNT 279
Query: 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTK 156
H V ++FN + ++V+ D+S+ WD S + ++ ++ + +V V
Sbjct: 280 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 337
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
I+ S D T++ ++ + G + +++ D+T+RL D G
Sbjct: 338 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 397
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
L+ +GH + C+ + + G+ DG I WDL+ A++ + A +L ++ L
Sbjct: 398 ACLRVLEGHE----ELVRCIRFDNKRIVSGAYDGKIKVWDLI-AALDPRAPAGTLCLRTL 452
Query: 277 L 277
+
Sbjct: 453 V 453
Score = 146 (56.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 49/211 (23%), Positives = 97/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD ST R GH V ++++E V+++ D ++R WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 270
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + ++ S D ++ +D+ +++ +G
Sbjct: 271 V--NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ + ST E ++ GH K + CL D V
Sbjct: 329 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 382
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 383 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 413
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 208 (78.3 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 66/278 (23%), Positives = 123/278 (44%)
Query: 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG--IHI---KTYKSHGREVRDVHVTAD 71
H V F+ DG Y L+ G +R+ ++++ G +H ++ K +R V + D
Sbjct: 280 HNSVVCCVNFSNDGKY-LATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
+ L + D+ + WD+ T ++ F GHE ++ ++ ++ +VS D+ + WD
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 132 RSHS---TEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQ- 185
T + + ++ V SV ++ + GS+D VR +D + G L G
Sbjct: 399 EKGKCAFTLGNEEVGP-KNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHL 457
Query: 186 -PVNCISMSNDGNCILASCLDSTLRLLD----RSTGELLQEYKGHICKSFKTDCCLTNSD 240
V ++ S DG + + LD +L+L D RS + GH K F +
Sbjct: 458 DSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGH--KDFVLSVAFSPDG 515
Query: 241 AHVTGGSEDGYIYFWDLVDASVVAKFKAH-SLVVKLLL 277
+ + GS+D + FWD + + + H + V+ + L
Sbjct: 516 SWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVAL 553
Score = 160 (61.4 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 42/151 (27%), Positives = 72/151 (47%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
T N G + V + + DG + D +RLW+ G ++ Y+ H V V
Sbjct: 406 TLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAF 465
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRK----FRGHESEVNAVKFNEYSSVVVSAGYDQ 124
+ D L S D+ + WD+S R + F GH+ V +V F+ S ++S D+
Sbjct: 466 SPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDR 525
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT 155
S++ WD R+ +T ++ ++SV+SV L+
Sbjct: 526 SVQFWDPRNGTTH--MMLQGHKNSVISVALS 554
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/170 (27%), Positives = 83/170 (48%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH--GRE--VRDVHVTAD 71
GHE + + ++ DG + +S D+ ++W+ +G T + G + V V ++ D
Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 72 NSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
+L++ G D + WD TG + ++ GH V +V F+ + S D+SL+ WD
Sbjct: 427 G-RLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWD 485
Query: 131 CR-SHSTEPIQI-IDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG 176
S S + + +D V+SV + + +I GS D +V+ +D R G
Sbjct: 486 LSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 208 (78.3 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ +N
Sbjct: 338 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAV--LHLRFNN 393
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 451
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 452 N--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + G +C + L +
Sbjct: 510 RCIRFDNKR--IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 567
Query: 243 VTGGSEDGYIYFWDLVD 259
+ S D I WD ++
Sbjct: 568 IVSSSHDDTILIWDFLN 584
Score = 179 (68.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 377 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 432
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W+ ST +R GH+ + +++ + +VVS D ++R
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 490
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 491 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 533
Score = 150 (57.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 51/241 (21%), Positives = 106/241 (43%)
Query: 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
+D TI++W+ + H V + + D +I+ D + WDV+ G ++
Sbjct: 321 RDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNT 378
Query: 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTK 156
H V ++FN + ++V+ D+S+ WD S + ++ ++ + +V V
Sbjct: 379 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 436
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
I+ S D T++ ++ + G + +++ D+T+RL D G
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 496
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
L+ +GH + C+ + + G+ DG I WDL+ A++ + A +L ++ L
Sbjct: 497 ACLRVLEGHE----ELVRCIRFDNKRIVSGAYDGKIKVWDLM-AALDPRAPAGTLCLRTL 551
Query: 277 L 277
+
Sbjct: 552 V 552
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 49/211 (23%), Positives = 97/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD ST R GH V ++++E V+++ D ++R WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + ++ S D ++ +D+ +++ +G
Sbjct: 370 V--NAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ + ST E ++ GH K + CL D V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 481
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 482 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 208 (78.3 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ +N
Sbjct: 338 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAV--LHLRFNN 393
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 451
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 452 N--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + G +C + L +
Sbjct: 510 RCIRFDNKR--IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 567
Query: 243 VTGGSEDGYIYFWDLVD 259
+ S D I WD ++
Sbjct: 568 IVSSSHDDTILIWDFLN 584
Score = 179 (68.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 377 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 432
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W+ ST +R GH+ + +++ + +VVS D ++R
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 490
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 491 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 533
Score = 150 (57.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 51/241 (21%), Positives = 106/241 (43%)
Query: 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
+D TI++W+ + H V + + D +I+ D + WDV+ G ++
Sbjct: 321 RDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNT 378
Query: 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTK 156
H V ++FN + ++V+ D+S+ WD S + ++ ++ + +V V
Sbjct: 379 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 436
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
I+ S D T++ ++ + G + +++ D+T+RL D G
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 496
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
L+ +GH + C+ + + G+ DG I WDL+ A++ + A +L ++ L
Sbjct: 497 ACLRVLEGHE----ELVRCIRFDNKRIVSGAYDGKIKVWDLM-AALDPRAPAGTLCLRTL 551
Query: 277 L 277
+
Sbjct: 552 V 552
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 49/211 (23%), Positives = 97/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD ST R GH V ++++E V+++ D ++R WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + ++ S D ++ +D+ +++ +G
Sbjct: 370 V--NAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ + ST E ++ GH K + CL D V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 481
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 482 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 207 (77.9 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ +N
Sbjct: 297 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNN 352
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 353 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 410
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 411 N--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 468
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + G +C + L +
Sbjct: 469 RCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 526
Query: 243 VTGGSEDGYIYFWDLVD 259
+ S D I WD ++
Sbjct: 527 IVSSSHDDTILIWDFLN 543
Score = 179 (68.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 336 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 391
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W+ ST +R GH+ + +++ + +VVS D ++R
Sbjct: 392 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 449
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 450 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 492
Score = 160 (61.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 53/241 (21%), Positives = 108/241 (44%)
Query: 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
+D TI++W+ + + H V + + D +I+ D + WDV+TG ++
Sbjct: 280 RDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNT 337
Query: 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTK 156
H V ++FN + ++V+ D+S+ WD S + ++ ++ + +V V
Sbjct: 338 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 395
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
I+ S D T++ ++ + G + +++ D+T+RL D G
Sbjct: 396 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 455
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
L+ +GH + C+ + + G+ DG I WDLV A++ + A +L ++ L
Sbjct: 456 ACLRVLEGHE----ELVRCIRFDNKRIVSGAYDGKIKVWDLV-AALDPRAPAGTLCLRTL 510
Query: 277 L 277
+
Sbjct: 511 V 511
Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 48/211 (22%), Positives = 97/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD +T R GH V ++++E V+++ D ++R WD
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 328
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + ++ S D ++ +D+ +++ +G
Sbjct: 329 V--NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 386
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ + ST E ++ GH K + CL D V
Sbjct: 387 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 440
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 441 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 471
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 207 (77.9 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ +N
Sbjct: 302 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNN 357
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 358 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 415
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 416 N--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 473
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + G +C + L +
Sbjct: 474 RCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 531
Query: 243 VTGGSEDGYIYFWDLVD 259
+ S D I WD ++
Sbjct: 532 IVSSSHDDTILIWDFLN 548
Score = 179 (68.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 341 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 396
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W+ ST +R GH+ + +++ + +VVS D ++R
Sbjct: 397 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 454
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 455 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 497
Score = 158 (60.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 53/241 (21%), Positives = 107/241 (44%)
Query: 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
+D TI++W+ + H V + + D +I+ D + WDV+TG ++
Sbjct: 285 RDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNT 342
Query: 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTK 156
H V ++FN + ++V+ D+S+ WD S + ++ ++ + +V V
Sbjct: 343 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 400
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
I+ S D T++ ++ + G + +++ D+T+RL D G
Sbjct: 401 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 460
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
L+ +GH + C+ + + G+ DG I WDLV A++ + A +L ++ L
Sbjct: 461 ACLRVLEGHE----ELVRCIRFDNKRIVSGAYDGKIKVWDLV-AALDPRAPAGTLCLRTL 515
Query: 277 L 277
+
Sbjct: 516 V 516
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 49/211 (23%), Positives = 97/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD ST R GH V ++++E V+++ D ++R WD
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 333
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + ++ S D ++ +D+ +++ +G
Sbjct: 334 V--NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 391
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ + ST E ++ GH K + CL D V
Sbjct: 392 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 445
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 446 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 476
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 207 (77.9 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 54/212 (25%), Positives = 103/212 (48%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
TE VL+GH G V + RF D + LSC +D +IR W+ + Y+ H V DV +
Sbjct: 333 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDI 392
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ + S DR W +R + GH ++V+ VKF+ S+ + + D+++R
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
W + ++ +++ + V+S+ + + D ++ +D+ G + G
Sbjct: 453 WSAQQGNS--VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHT 510
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD-RST 215
N S+ S D + I ++ +D+++R+ D R+T
Sbjct: 511 DNITSLTFSPDSSLIASASMDNSVRVWDIRNT 542
Score = 206 (77.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 37/127 (29%), Positives = 70/127 (55%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+ GH V +F+ + NY + D+T+RLW+ +G ++ + H V + + +
Sbjct: 421 IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 480
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
L S G D+++ WD+++G + ++ RGH + ++ F+ SS++ SA D S+R WD R
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Query: 133 S-HSTEP 138
+ H + P
Sbjct: 541 NTHCSAP 547
Score = 187 (70.9 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 56/212 (26%), Positives = 90/212 (42%)
Query: 50 GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK 109
G +K + H V AD+S L+SC D I YWD+ + ++GH V V
Sbjct: 332 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVD 391
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGT 167
+ YS S +D++ R W T P++I V V + GS D T
Sbjct: 392 ISPYSLYFASGSHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 168 VRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
VR + + G + G PV ++ S +G + ++ D L+L D ++G L +E +GH
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGH 509
Query: 226 ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T + + + S D + WD+
Sbjct: 510 TDNI--TSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 52/240 (21%), Positives = 97/240 (40%)
Query: 34 LSCGKDRT-IRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG 92
L+ G D + I+LW+ R +K + H +V +H+ D ++ D D G
Sbjct: 283 LAAGFDNSCIKLWSL-RSKKLKP-EPHRVDVSRIHLACD---ILEEEDDE-----DDDVG 332
Query: 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV 152
++ RGH V + +F SS ++S D S+R WD S + + ++ + +
Sbjct: 333 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDI 392
Query: 153 CLTKTEIIGGSVDGTVR--TFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRL 210
GS D T R +FD + V+C+ + N + D T+RL
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 211 LDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
G ++ + GH + + + ++ ED + WDL ++ + + H+
Sbjct: 453 WSAQQGNSVRLFTGH--RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHT 510
Score = 132 (51.5 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH G VL+ F+ +G Y S G+D+ ++LW+ G K + H + + + D+S +
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLI 525
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
S D + WD+ G SE+ V + S+V+
Sbjct: 526 ASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVL 567
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 206 (77.6 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 68/283 (24%), Positives = 126/283 (44%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHRGIHIK-TYKSHGRE 62
+P +L H+ V +F+ G Y + D T +W + +K T +SH
Sbjct: 212 IPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNP 271
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK----FNEYSSVVV 118
V V + D++KL++CG + WDV TG V+R G+ + V F + + +V
Sbjct: 272 VSFVSWSPDDTKLLTCGNAEVLKLWDVDTG-VLRHTFGNNNTGFTVSSCAWFPDSTRLVC 330
Query: 119 -SAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDI-- 173
S+ ++ + WD + + + + V+ + +T +I D +R ++
Sbjct: 331 GSSDPERGIVMWDTDGNEIKAWR--GTRIPKVVDLAVTPDGESMITVFSDKEIRILNLET 388
Query: 174 RVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ--EYKGHICKSFK 231
+V R +S++ QP+ +S+S DG + + + L D + GE Q ++ GH +
Sbjct: 389 KVERVISEE--QPITSLSISGDGKFFIVNLSCQEIHLWDLA-GEWKQPLKFSGHRQSKYV 445
Query: 232 TDCCLTNSDAH-VTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273
C D+ + GSED +Y W+L + + HS+ V
Sbjct: 446 IRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTV 488
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 207 (77.9 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ +N
Sbjct: 338 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNN 393
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 451
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 452 N--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + G +C + L +
Sbjct: 510 RCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 567
Query: 243 VTGGSEDGYIYFWDLVD 259
+ S D I WD ++
Sbjct: 568 IVSSSHDDTILIWDFLN 584
Score = 179 (68.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 377 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 432
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W+ ST +R GH+ + +++ + +VVS D ++R
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 490
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 491 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 533
Score = 158 (60.7 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 53/241 (21%), Positives = 107/241 (44%)
Query: 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
+D TI++W+ + H V + + D +I+ D + WDV+TG ++
Sbjct: 321 RDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNT 378
Query: 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTK 156
H V ++FN + ++V+ D+S+ WD S + ++ ++ + +V V
Sbjct: 379 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 436
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
I+ S D T++ ++ + G + +++ D+T+RL D G
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 496
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
L+ +GH + C+ + + G+ DG I WDLV A++ + A +L ++ L
Sbjct: 497 ACLRVLEGHE----ELVRCIRFDNKRIVSGAYDGKIKVWDLV-AALDPRAPAGTLCLRTL 551
Query: 277 L 277
+
Sbjct: 552 V 552
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 49/211 (23%), Positives = 97/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD ST R GH V ++++E V+++ D ++R WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + ++ S D ++ +D+ +++ +G
Sbjct: 370 V--NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ + ST E ++ GH K + CL D V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 481
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 482 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 207 (77.9 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ +N
Sbjct: 338 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNN 393
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 451
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 452 N--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + G +C + L +
Sbjct: 510 RCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 567
Query: 243 VTGGSEDGYIYFWDLVD 259
+ S D I WD ++
Sbjct: 568 IVSSSHDDTILIWDFLN 584
Score = 179 (68.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 377 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 432
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W+ ST +R GH+ + +++ + +VVS D ++R
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 490
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 491 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 533
Score = 160 (61.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 53/241 (21%), Positives = 108/241 (44%)
Query: 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
+D TI++W+ + + H V + + D +I+ D + WDV+TG ++
Sbjct: 321 RDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNT 378
Query: 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTK 156
H V ++FN + ++V+ D+S+ WD S + ++ ++ + +V V
Sbjct: 379 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 436
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
I+ S D T++ ++ + G + +++ D+T+RL D G
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 496
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
L+ +GH + C+ + + G+ DG I WDLV A++ + A +L ++ L
Sbjct: 497 ACLRVLEGHE----ELVRCIRFDNKRIVSGAYDGKIKVWDLV-AALDPRAPAGTLCLRTL 551
Query: 277 L 277
+
Sbjct: 552 V 552
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 48/211 (22%), Positives = 97/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD +T R GH V ++++E V+++ D ++R WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + ++ S D ++ +D+ +++ +G
Sbjct: 370 V--NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ + ST E ++ GH K + CL D V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 481
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 482 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 207 (77.9 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 62/257 (24%), Positives = 117/257 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ +N
Sbjct: 338 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAV--LHLRFNN 393
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 451
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 452 N--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + G +C + L +
Sbjct: 510 RCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ 567
Query: 243 VTGGSEDGYIYFWDLVD 259
+ S D I WD ++
Sbjct: 568 IVSSSHDDTILIWDFLN 584
Score = 179 (68.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 377 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 432
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W+ ST +R GH+ + +++ + +VVS D ++R
Sbjct: 433 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 490
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 491 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 533
Score = 155 (59.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/241 (21%), Positives = 107/241 (44%)
Query: 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
+D TI++W+ + + H V + + D +I+ D + WDV+ G ++
Sbjct: 321 RDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNT 378
Query: 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTK 156
H V ++FN + ++V+ D+S+ WD S + ++ ++ + +V V
Sbjct: 379 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD 436
Query: 157 TEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216
I+ S D T++ ++ + G + +++ D+T+RL D G
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 496
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
L+ +GH + C+ + + G+ DG I WDLV A++ + A +L ++ L
Sbjct: 497 ACLRVLEGHE----ELVRCIRFDNKRIVSGAYDGKIKVWDLV-AALDPRAPAGTLCLRTL 551
Query: 277 L 277
+
Sbjct: 552 V 552
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 48/211 (22%), Positives = 97/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K++S D I WD +T R GH V ++++E V+++ D ++R WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + ++ S D ++ +D+ +++ +G
Sbjct: 370 V--NAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ + ST E ++ GH K + CL D V
Sbjct: 428 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 481
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 482 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 512
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 204 (76.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 66/260 (25%), Positives = 119/260 (45%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
T +++ H+ AV +++ D ++ +S D I++W P+ + + +H +RD+
Sbjct: 126 TFETLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTESIRDMAF 185
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
++++SK ++C D + W+ S G+ R GH +V + ++ ++ SA D ++
Sbjct: 186 SSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKL 245
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE---IIGGSVDGTVRTFDIRVG-RELS---D 181
WD RS + I I F+ +V+ T+ ++ S D + R FDIR +EL D
Sbjct: 246 WDPRSGNC--ISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMCVRD 303
Query: 182 DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK-SFKTDCCLT--- 237
+ N+ LA C D +L+ D LLQ I + D C+T
Sbjct: 304 ETDYMTLEWHPINESMFTLA-CYDGSLKHFD-----LLQNLNEPILTIPYAHDKCITSLS 357
Query: 238 -NSDAHVTG-GSEDGYIYFW 255
N H+ ++D I FW
Sbjct: 358 YNPVGHIFATAAKDRTIRFW 377
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 206 (77.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 67/271 (24%), Positives = 110/271 (40%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-IHIK-TYKSHGREV 63
+P T V H+G V A +F+ + G DR ++LW K + +
Sbjct: 310 VPVTAVCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGI 369
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123
+ + S L++ D W V R+ GH +V + KF ++ +VS +D
Sbjct: 370 TSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHD 429
Query: 124 QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDL 183
++L+ WD RS S + + VC T+ ++ G D +R +DIR L
Sbjct: 430 RTLKLWDLRSKVCIKTVFAGSSCNDI--VC-TEQCVMSGHFDKKIRFWDIRYNTRSLVSL 486
Query: 184 GQPVN--CISMSNDGNCILASCL-DSTLRLLDRSTGELLQEYK--GHICKSFKTDCCLTN 238
GQ + S N L SC D L+++D + Q + G C S T +
Sbjct: 487 GQLLGKQTASRFNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSP 546
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
++V GS +G +Y W ++ V H
Sbjct: 547 DGSYVAAGSAEGSLYVWSVLSGKVEKVLSKH 577
Score = 141 (54.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 53/240 (22%), Positives = 97/240 (40%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHRGIHIKTYKSHGREVRDVHVTAD 71
L G + + F+ G+Y L+ D R+W + +R H T H +V D
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRH--TLTGHSGKVLSAKFLLD 419
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRK-FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
N++++S DR + WD+ + I+ F G S N + E V+S +D+ +R WD
Sbjct: 420 NARIVSGSHDRTLKLWDLRSKVCIKTVFAG--SSCNDIVCTE--QCVMSGHFDKKIRFWD 475
Query: 131 CRSHSTEPIQIIDSFQDSVMS-VCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNC 189
R ++ + + S +TE++ S D ++ D+R+ C
Sbjct: 476 IRYNTRSLVSLGQLLGKQTASRFNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKC 535
Query: 190 ------ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHV 243
+ S DG+ + A + +L + +G++ + H + S AHV
Sbjct: 536 GSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLSGKVEKVLSKHHSSPINA-VAWSPSGAHV 594
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/193 (24%), Positives = 86/193 (44%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L GH G VL+A+F D +S DRT++LW+ + IKT + G D+ T
Sbjct: 402 HTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFA-GSSCNDIVCT-- 458
Query: 72 NSKLISCGGDRQIFYWDVSTG-RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
++S D++I +WD+ R + + A +FN + ++S D L+ D
Sbjct: 459 EQCVMSGHFDKKIRFWDIRYNTRSLVSLGQLLGKQTASRFNPERTELLSCSRDDLLKIID 518
Query: 131 CRSHSTEPIQIIDSFQ---DSVMSVCLTK-TEIIGGSVDGTVRTFDI---RVGRELSDDL 183
R ++ F+ D V + + GS +G++ + + +V + LS
Sbjct: 519 LRINAVRQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLSGKVEKVLSKHH 578
Query: 184 GQPVNCISMSNDG 196
P+N ++ S G
Sbjct: 579 SSPINAVAWSPSG 591
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 202 (76.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 63/255 (24%), Positives = 115/255 (45%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
LKGH V + DG Y LS D+T+RLW G + + H +V V +ADN
Sbjct: 59 LKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNR 118
Query: 74 KLISCGGDRQIFYWD-VSTGRVIRKFRGHESEVNAVKF--NEYSSVVVSAGYDQSLRAWD 130
+++S DR I W+ + + +GH V+ V+F N + V+VS+G+D+ ++ W+
Sbjct: 119 QIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWE 178
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGREL-SDDLGQPVNC 189
S + I + + +++ + G DGT +D+ + L S + ++
Sbjct: 179 LSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEIHA 238
Query: 190 ISMSNDGNCILASCLDSTLRL-LDRST--GELLQEYKGHICKSFKTDCCLT--NSDAHVT 244
+ S + + A+ S + L++ + EL E+ KS + +C ++D
Sbjct: 239 LVFSPNRYWLCAATASSIIIFDLEKKSKVDELKPEFAAVGKKSREPECISLAWSADGQTL 298
Query: 245 -GGSEDGYIYFWDLV 258
G D I W ++
Sbjct: 299 FAGYTDNIIRAWGVM 313
Score = 190 (71.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 55/212 (25%), Positives = 101/212 (47%)
Query: 14 LKGHEGAVLAARFNGDG-NYCLSCGKDRTIRLWNPHR-----GIHIKTYKSHGREVRDVH 67
L+GH G V + + + N LS +D+T+ +WN R G ++ K H V D
Sbjct: 11 LEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCV 70
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+++D + +S D+ + W+++TG R+F GH ++V +V F+ + +VS D+S++
Sbjct: 71 ISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIK 130
Query: 128 AW----DCRSHSTEPIQIIDSFQDSV-MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD 182
W DC+ TE + V S I+ D V+ +++ + +D
Sbjct: 131 LWNTLGDCKYTITEKGH--SEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDH 188
Query: 183 LGQP--VNCISMSNDGNCILASCLDSTLRLLD 212
+G +N +++S DG+ + D T L D
Sbjct: 189 IGHTGYINTVTISPDGSLCASGGKDGTTMLWD 220
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 54/236 (22%), Positives = 111/236 (47%)
Query: 55 TYKSHGREVRDVHVTADN-SKLISCGGDRQIFYWDV-----STGRVIRKFRGHESEVNAV 108
T + H V + + +N + L+S D+ + W++ S G R +GH V+
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 109 KFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDG 166
+ + +SA +D++LR W+ + +T + + D V+SV + +I+ GS D
Sbjct: 70 VISSDGAYALSASWDKTLRLWELATGTTTR-RFVGHTND-VLSVSFSADNRQIVSGSRDR 127
Query: 167 TVRTFDIRVG--RELSDDLGQP--VNCISMS-NDGN-CILASCLDSTLRLLDRSTGELLQ 220
+++ ++ +G + + G V+C+ S N N I++S D +++ + S+ +L
Sbjct: 128 SIKLWNT-LGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQT 186
Query: 221 EYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA----SVVAKFKAHSLV 272
++ GH + ++ + G +DG WDL ++ S+ A + H+LV
Sbjct: 187 DHIGHT--GYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEIHALV 240
>UNIPROTKB|Q8NAA4 [details] [associations]
symbol:ATG16L2 "Autophagy-related protein 16-2"
species:9606 "Homo sapiens" [GO:0006914 "autophagy" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000112569
HOVERGEN:HBG050534 InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914
EMBL:AK093017 EMBL:AK090597 EMBL:CH471076 EMBL:BC036713
EMBL:BC137489 EMBL:BC137490 EMBL:BC142718 EMBL:BC146660
EMBL:AL832974 IPI:IPI00300536 IPI:IPI00892538 IPI:IPI00892678
RefSeq:NP_203746.1 UniGene:Hs.653186 ProteinModelPortal:Q8NAA4
SMR:Q8NAA4 IntAct:Q8NAA4 PhosphoSite:Q8NAA4 DMDM:189027648
PRIDE:Q8NAA4 Ensembl:ENST00000321297 GeneID:89849 KEGG:hsa:89849
UCSC:uc001otd.3 CTD:89849 GeneCards:GC11P072525 H-InvDB:HIX0009913
HGNC:HGNC:25464 HPA:HPA045444 neXtProt:NX_Q8NAA4
PharmGKB:PA142672575 InParanoid:Q8NAA4 OrthoDB:EOG44F68R
PhylomeDB:Q8NAA4 GenomeRNAi:89849 NextBio:76342 ArrayExpress:Q8NAA4
Bgee:Q8NAA4 CleanEx:HS_ATG16L2 Genevestigator:Q8NAA4 Uniprot:Q8NAA4
Length = 619
Score = 206 (77.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 68/261 (26%), Positives = 119/261 (45%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK---TYKSHGRE 62
LP +VL H V A RF + + + G DR I LWN G ++ T + G
Sbjct: 324 LPTRAQDVLDAHLSEVNAVRFGPNSSLLATGGADRLIHLWNVV-GSRLEANQTLEGAGGS 382
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
+ V ++++ ++ W V + GH+ +V A KF V+
Sbjct: 383 ITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKETLSGHKDKVTAAKFKLTRHQAVTGSR 442
Query: 123 DQSLRAWDC-RSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
D++++ WD R++ + I ++ S+ + V VC II G D +R +D R G +
Sbjct: 443 DRTVKEWDLGRAYCSRTINVL-SYCNDV--VCGDHI-IISGHNDQKIRFWDSR-GPHCTQ 497
Query: 182 DL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK--GHICKSFKTDCCL 236
+ G+ V +S+S+D +L+ D+TL+++D + Q ++ G C S T
Sbjct: 498 VIPVQGR-VTSLSLSHDQLHLLSCSRDNTLKVIDLRVSNIRQVFRADGFKCGSDWTKAVF 556
Query: 237 TNSDAHVTGGSEDGYIYFWDL 257
+ ++ GS DG +Y WD+
Sbjct: 557 SPDRSYALAGSCDGALYIWDV 577
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 62/259 (23%), Positives = 106/259 (40%)
Query: 8 RTEAN-VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
R EAN L+G G++ + F+ G L+ ++ +LW +T H +V
Sbjct: 369 RLEANQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKETLSGHKDKVTAA 428
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
+ ++ DR + WD+ R S N V ++ +++S DQ +
Sbjct: 429 KFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVL-SYCNDVVCGDH--IIISGHNDQKI 485
Query: 127 RAWDCRS-HSTEPIQIIDSFQDSVMSVCLTKTEI--IGGSVDGTVRTFDIRVG--REL-- 179
R WD R H T+ I + Q V S+ L+ ++ + S D T++ D+RV R++
Sbjct: 486 RFWDSRGPHCTQVIPV----QGRVTSLSLSHDQLHLLSCSRDNTLKVIDLRVSNIRQVFR 541
Query: 180 SDDL--GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDC-CL 236
+D G S D + LA D L + D TG+L +G C + C
Sbjct: 542 ADGFKCGSDWTKAVFSPDRSYALAGSCDGALYIWDVDTGKLESRLQGPHCAAVNAVAWCY 601
Query: 237 TNSDAHVTGGSEDGYIYFW 255
+ S H+ + + W
Sbjct: 602 SGS--HMVSVDQGRKVVLW 618
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 204 (76.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 226 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 281
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 282 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 339
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 340 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 397
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 398 RCIRFDNKR--IVSGAYDGKIKVWD 420
Score = 180 (68.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 265 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNV-V 320
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 321 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 378
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 379 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 422
Score = 169 (64.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S +D+ T VL GH AV F D Y +S DRTI++W+ ++T H R
Sbjct: 300 SATDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 355
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + ++S D I WD+ G +R GHE V ++F+ + +VS
Sbjct: 356 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA 411
Query: 122 YDQSLRAWDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
YD ++ WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 412 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 469
Score = 152 (58.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 49/211 (23%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD S+ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 200 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 257
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 258 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 315
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 316 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 369
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 370 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 400
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 204 (76.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 243 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 298
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 299 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 356
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 357 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 414
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 415 RCIRFDNKR--IVSGAYDGKIKVWD 437
Score = 180 (68.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 282 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNV-V 337
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 338 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 395
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 396 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 439
Score = 169 (64.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S +D+ T VL GH AV F D Y +S DRTI++W+ ++T H R
Sbjct: 317 SATDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 372
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + ++S D I WD+ G +R GHE V ++F+ + +VS
Sbjct: 373 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA 428
Query: 122 YDQSLRAWDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
YD ++ WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 429 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 486
Score = 149 (57.5 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 48/211 (22%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD ++ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 274
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 275 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 333 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 386
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 387 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 417
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 204 (76.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 243 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 298
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 299 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 356
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 357 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 414
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 415 RCIRFDNKR--IVSGAYDGKIKVWD 437
Score = 180 (68.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 282 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNV-V 337
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 338 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 395
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 396 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 439
Score = 169 (64.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S +D+ T VL GH AV F D Y +S DRTI++W+ ++T H R
Sbjct: 317 SATDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 372
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + ++S D I WD+ G +R GHE V ++F+ + +VS
Sbjct: 373 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA 428
Query: 122 YDQSLRAWDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
YD ++ WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 429 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 486
Score = 149 (57.5 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 48/211 (22%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD ++ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 274
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 275 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 333 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 386
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 387 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 417
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 205 (77.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 52/212 (24%), Positives = 102/212 (48%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
TE +L+GH G V + RF D + LSC +D +IR W+ + Y+ H V DV +
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDI 392
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ + S DR W +R + GH ++V+ VKF+ S+ + + D+++R
Sbjct: 393 SPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
W + ++ +++ + V+S+ + + D ++ +D+ G + G
Sbjct: 453 WSAQQGNS--VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHT 510
Query: 187 --VNCISMSNDGNCILASCLDSTLRLLD-RST 215
+ ++ S D I ++ +D+++R+ D RST
Sbjct: 511 DSITSLAFSPDSGLIASASMDNSVRVWDIRST 542
Score = 186 (70.5 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 57/212 (26%), Positives = 90/212 (42%)
Query: 50 GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK 109
G +K + H V AD+S L+SC D I YWD+ + ++GH V V
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVD 391
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGT 167
+ +S S +D++ R W T P++I V V + GS D T
Sbjct: 392 ISPFSLYFASGSHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 168 VRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
VR + + G + G PV +S S +G + ++ D L+L D ++G L +E +GH
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGH 509
Query: 226 ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
S T + + S D + WD+
Sbjct: 510 T-DSI-TSLAFSPDSGLIASASMDNSVRVWDI 539
Score = 134 (52.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 55/251 (21%), Positives = 102/251 (40%)
Query: 24 ARFNGDGNYCLSCGKDRT-IRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL-ISCGGD 81
A + D L+ G D + I+LW+ + K KS HV D S++ ++C
Sbjct: 274 AEISSDSKL-LAAGFDNSCIKLWS----LRSKKLKSEPH-----HV--DTSRIRLACDTL 321
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQI 141
+ + +TG ++ RGH V + +F SS ++S D S+R WD S + +
Sbjct: 322 EEEENEEDNTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQ 381
Query: 142 IDSFQDSVMSVCLTKTEIIGGSVDGTVR--TFDIRVGRELSDDLGQPVNCISMSNDGNCI 199
++ + + GS D T R +FD + V+C+ + N +
Sbjct: 382 GHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 441
Query: 200 LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259
D T+RL G ++ + GH + + + ++ ED + WDL
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGH--RGPVLSLSFSPNGKYLASAGEDQRLKLWDLAS 499
Query: 260 ASVVAKFKAHS 270
++ + + H+
Sbjct: 500 GTLFKELRGHT 510
Score = 123 (48.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 29/115 (25%), Positives = 55/115 (47%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH G VL+ F+ +G Y S G+D+ ++LW+ G K + H + + + D+ +
Sbjct: 466 GHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLI 525
Query: 76 ISCGGDRQIFYWDV-----------STGRVIRKFRGHESEVNAVKFNEYSSVVVS 119
S D + WD+ S+G ++ + G S V +V+F + ++V+
Sbjct: 526 ASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVT 580
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 204 (76.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 260 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 315
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 316 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 373
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 374 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 431
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 432 RCIRFDNKR--IVSGAYDGKIKVWD 454
Score = 180 (68.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 299 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNV-V 354
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 355 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 412
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 413 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 456
Score = 169 (64.5 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S +D+ T VL GH AV F D Y +S DRTI++W+ ++T H R
Sbjct: 334 SATDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 389
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + ++S D I WD+ G +R GHE V ++F+ + +VS
Sbjct: 390 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA 445
Query: 122 YDQSLRAWDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
YD ++ WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 446 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 503
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 49/211 (23%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD S+ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 234 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 291
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 292 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 349
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 350 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 403
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 434
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 204 (76.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 262 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 317
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 318 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 375
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 376 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 433
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 434 RCIRFDNKR--IVSGAYDGKIKVWD 456
Score = 180 (68.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 301 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNV-V 356
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 357 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 414
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 415 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 458
Score = 169 (64.5 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S +D+ T VL GH AV F D Y +S DRTI++W+ ++T H R
Sbjct: 336 SATDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 391
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + ++S D I WD+ G +R GHE V ++F+ + +VS
Sbjct: 392 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA 447
Query: 122 YDQSLRAWDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
YD ++ WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 448 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 505
Score = 149 (57.5 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 48/211 (22%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD ++ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 236 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 293
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 294 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 351
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 352 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 405
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 406 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 436
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 204 (76.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 263 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 318
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 319 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 376
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 377 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 434
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 435 RCIRFDNKR--IVSGAYDGKIKVWD 457
Score = 180 (68.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 302 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNV-V 357
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 358 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 415
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 416 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 459
Score = 169 (64.5 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S +D+ T VL GH AV F D Y +S DRTI++W+ ++T H R
Sbjct: 337 SATDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 392
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + ++S D I WD+ G +R GHE V ++F+ + +VS
Sbjct: 393 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA 448
Query: 122 YDQSLRAWDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
YD ++ WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 449 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 506
Score = 149 (57.5 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 48/211 (22%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD ++ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 237 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 294
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 295 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 352
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 353 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 406
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 407 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 437
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 204 (76.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 275 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 330
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 388
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 389 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 446
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 447 RCIRFDNKR--IVSGAYDGKIKVWD 469
Score = 180 (68.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 314 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNV-V 369
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 427
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 428 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 471
Score = 169 (64.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S +D+ T VL GH AV F D Y +S DRTI++W+ ++T H R
Sbjct: 349 SATDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 404
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + ++S D I WD+ G +R GHE V ++F+ + +VS
Sbjct: 405 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA 460
Query: 122 YDQSLRAWDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
YD ++ WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 461 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 152 (58.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/211 (23%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD S+ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 249 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 306
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 307 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 365 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 418
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 419 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 449
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 204 (76.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 275 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 330
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 388
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 389 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 446
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 447 RCIRFDNKR--IVSGAYDGKIKVWD 469
Score = 180 (68.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 314 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNV-V 369
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 427
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 428 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 471
Score = 169 (64.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S +D+ T VL GH AV F D Y +S DRTI++W+ ++T H R
Sbjct: 349 SATDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 404
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + ++S D I WD+ G +R GHE V ++F+ + +VS
Sbjct: 405 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA 460
Query: 122 YDQSLRAWDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
YD ++ WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 461 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 48/211 (22%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD ++ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 306
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 307 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 365 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 418
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 419 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 449
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 204 (76.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 55/205 (26%), Positives = 99/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 275 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 330
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 331 GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 388
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 389 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 446
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 447 RCIRFDNKR--IVSGAYDGKIKVWD 469
Score = 180 (68.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 314 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNV-V 369
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 370 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 427
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 428 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 471
Score = 169 (64.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 2 SVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR 61
S +D+ T VL GH AV F D Y +S DRTI++W+ ++T H R
Sbjct: 349 SATDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 404
Query: 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
+ + + ++S D I WD+ G +R GHE V ++F+ + +VS
Sbjct: 405 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGA 460
Query: 122 YDQSLRAWDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
YD ++ WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 461 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 518
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 48/211 (22%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD ++ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 306
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 307 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 365 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 418
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 419 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 449
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 203 (76.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 62/256 (24%), Positives = 114/256 (44%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH G+VL ++ D +S D T+R+W+ + G + T H V +H+ +N
Sbjct: 246 LMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFNNG 301
Query: 74 KLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
+++C DR I WD+++ I R GH + VN V F+E +VSA D++++ W
Sbjct: 302 MMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWS 359
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--VN 188
+ + E ++ ++ + + + ++ GS D ++R +DI G L G V
Sbjct: 360 --TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVR 417
Query: 189 CISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAHV 243
CI D I++ D +++ D + +C + + L + +
Sbjct: 418 CIRF--DTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQI 475
Query: 244 TGGSEDGYIYFWDLVD 259
S D I WD ++
Sbjct: 476 VSSSHDDTILIWDFLN 491
Score = 179 (68.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 46/165 (27%), Positives = 79/165 (47%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RFN ++C KDR+I +W+ I + H R +V V
Sbjct: 284 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMTSPSEITLRRVLVGH-RAAVNV-V 339
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D ++S GDR I W ST +R GH+ + +++ + +VVS D S+R
Sbjct: 340 DFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNSIRL 397
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173
WD + +++++ ++ V + I+ G+ DG ++ +D+
Sbjct: 398 WDIECGAC--LRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDL 440
Score = 177 (67.4 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 62/260 (23%), Positives = 115/260 (44%)
Query: 27 NGDGNYCLSC--GK------DRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISC 78
N G YCL GK D TI++W+ +KT H V + + D+ +IS
Sbjct: 209 NSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV--LCLQYDDKVIISG 266
Query: 79 GGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEP 138
D + WDV+TG ++ H V ++FN + ++V+ D+S+ WD S S
Sbjct: 267 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMTSPSEIT 324
Query: 139 IQ-IIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGN 197
++ ++ + +V V + I+ S D T++ + + G +
Sbjct: 325 LRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 384
Query: 198 CILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
+++ D+++RL D G L+ +GH + C+ + G+ DG I WDL
Sbjct: 385 LVVSGSSDNSIRLWDIECGACLRVLEGHE----ELVRCIRFDTKRIVSGAYDGKIKVWDL 440
Query: 258 VDASVVAKFKAHSLVVKLLL 277
V A++ + +++L + L+
Sbjct: 441 V-AALDPRAASNTLCLNTLV 459
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 203 (76.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 55/205 (26%), Positives = 100/205 (48%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 248 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSN 303
Query: 73 SKLISCGGDRQIFYWDVS--TGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD++ T +R+ GH + VN V F++ +VSA D++++ W
Sbjct: 304 GLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 361
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 362 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 419
Query: 188 NCISMSNDGNCILASCLDSTLRLLD 212
CI N I++ D +++ D
Sbjct: 420 RCIRFDNKR--IVSGAYDGKIKVWD 442
Score = 178 (67.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI---KTYKSHGREVRDVHV 68
N L H AVL RF+ ++C KDR+I +W+ I + H R +V V
Sbjct: 287 NTLIHHNEAVLHLRFSN--GLMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNV-V 342
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 343 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 400
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 401 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 444
Score = 167 (63.8 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 46/171 (26%), Positives = 76/171 (44%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
T VL GH AV F D Y +S DRTI++W+ ++T H R + +
Sbjct: 327 TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 384
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ ++S D I WD+ G +R GHE V ++F+ + +VS YD ++
Sbjct: 385 R--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKV 440
Query: 129 WDCRSH-------STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFD 172
WD ++ ST ++ + V + + +II S D T+ +D
Sbjct: 441 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWD 491
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 48/211 (22%), Positives = 98/211 (46%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD ++ ++ GH V ++++E V+V+ D ++R WD
Sbjct: 222 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 279
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
++ E + + ++V+ + + ++ S D ++ +D+ +++ +G
Sbjct: 280 V--NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 337
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 338 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 391
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 392 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 422
>WB|WBGene00019427 [details] [associations]
symbol:atg-16.2 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00700000104505
HOGENOM:HOG000016928 InterPro:IPR020472 PRINTS:PR00320
EMBL:FO081583 PIR:T34332 RefSeq:NP_495299.2
ProteinModelPortal:Q09406 SMR:Q09406 DIP:DIP-27464N
MINT:MINT-1077081 PaxDb:Q09406 EnsemblMetazoa:K06A1.5.1
EnsemblMetazoa:K06A1.5.2 GeneID:174067 KEGG:cel:CELE_K06A1.5
CTD:174067 WormBase:K06A1.5 InParanoid:Q09406 OMA:IWNTKTT
NextBio:882359 GO:GO:0006914 GO:GO:0071688 Uniprot:Q09406
Length = 534
Score = 203 (76.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 63/268 (23%), Positives = 122/268 (45%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR--GIHIKTY 56
M LP L H+G V + D + + G D +++W +P++ + T
Sbjct: 228 MMTDVLPSEVKFKLSTHDGEVHDVEWMSDDTFA-TAGSDSKVQIWRVSPNKTDASKVSTL 286
Query: 57 KSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116
V + + ++ D+ W++ + R++ F GH +V++ + + S
Sbjct: 287 SGCLGPVNRLDYDSQRHVCLASSNDKTCRLWNIDSQRLLSTFSGHTDKVSSARLFQ-SHN 345
Query: 117 VVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVC-LTKTEIIGGSVDGTVRTFDIRV 175
V+S D++++ WD S ++ S +++ C ++++ I D VR +D R
Sbjct: 346 VISGSADRTIKNWDISSIRCLKSYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDARS 405
Query: 176 G-RELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLD-RSTGELLQEYKGHICKSFKTD 233
S +LGQ V+ + +S DG +LAS D TL L+D R+ G ++ Y + +KT
Sbjct: 406 SDATYSVELGQKVSSLDISMDGLQVLASSRDDTLSLIDVRNYG-IIHLYSA---EQYKTS 461
Query: 234 CCLT-----NSDAHVTGGSEDGYIYFWD 256
C T ++ +V GS + ++ W+
Sbjct: 462 CDSTRAIFSSTGEYVLAGSSNSSVFIWN 489
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 201 (75.8 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 67/257 (26%), Positives = 118/257 (45%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+GH V + DG Y LS D+++RLW G +T+ H +V V +ADN
Sbjct: 59 LEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNR 118
Query: 74 KLISCGGDRQIFYWD-VSTGRVIRKFRGHESEVNAVKF--NEYSSVVVSAGYDQSLRAWD 130
+++S DR I W+ + + +GH V+ V+F N + V+VSAG+D+ ++ W+
Sbjct: 119 QIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWE 178
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGREL-SDDLGQPVNC 189
S + I + + +++ + G DG +D+ + L S G ++
Sbjct: 179 LASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDEIHA 238
Query: 190 ISMSNDGNCILASCLDS-TLRLLDRST--GELLQEY--KGHICKSFKTDCCLT--NSDAH 242
+ S + + A+ S T+ L++ + EL EY KG KS + +C ++D
Sbjct: 239 LVFSPNRYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGK--KSREPECVSLAWSADGQ 296
Query: 243 VT-GGSEDGYIYFWDLV 258
G D I W ++
Sbjct: 297 TLFAGYTDNKIRAWGVM 313
Score = 173 (66.0 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 52/212 (24%), Positives = 100/212 (47%)
Query: 14 LKGHEGAVLAARFNGDG-NYCLSCGKDRTIRLWNPHR-----GIHIKTYKSHGREVRDVH 67
L+GH G V + + + N LS +D+T+ +WN R G ++ + H V D
Sbjct: 11 LEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCV 70
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+++D + +S D+ + W++S+G+ R F GH ++V +V F+ + +VS D++++
Sbjct: 71 ISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIK 130
Query: 128 AW----DCRSHSTEPIQIIDSFQDSV-MSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD 182
W DC+ T+ + V S I+ D V+ +++ R +D
Sbjct: 131 LWNTLGDCKYTITDKGHT--EWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDH 188
Query: 183 LGQP--VNCISMSNDGNCILASCLDSTLRLLD 212
+G +N +++S DG+ + D L D
Sbjct: 189 IGHTGYINTVTISPDGSLCASGGKDGVTMLWD 220
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 204 (76.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 73/292 (25%), Positives = 127/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN--PHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+WN H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWNVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R ++L G V + ++ DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCQKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNEGFTHVYSGGRDRKIYCTDLRNPDIRLLICEEKAPVLKMEL 302
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 203 (76.5 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 62/264 (23%), Positives = 115/264 (43%)
Query: 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG-IHIK-TYKSHGREV 63
+P T + H+G V A +F+ + G DR ++LW K + +
Sbjct: 310 VPTTAMCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGI 369
Query: 64 RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123
+ + S L++ D W V R+ GH +V + KF ++ +VS +D
Sbjct: 370 TSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHD 429
Query: 124 QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR---VGRELS 180
++L+ WD RS S + + VC T+ ++ G D +R +DIR + RE+
Sbjct: 430 RTLKLWDLRSKVCIKTVFAGSSCNDI--VC-TEQCVMSGHFDKKIRFWDIRSESIVREM- 485
Query: 181 DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK--GHICKSFKTDCCLTN 238
+ LG+ + + ++ + +L+ D L+++D + Q + G C S T +
Sbjct: 486 ELLGK-ITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSP 544
Query: 239 SDAHVTGGSEDGYIYFWDLVDASV 262
+V GS +G +Y W ++ V
Sbjct: 545 DGGYVAAGSAEGSLYIWSVLSGKV 568
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 46/197 (23%), Positives = 94/197 (47%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
+ L GH G VL+A+F D +S DRT++LW+ + IKT + G D+ T
Sbjct: 402 HTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFA-GSSCNDIVCT-- 458
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D++I +WD+ + ++R+ ++ A+ N + ++S D L+ D
Sbjct: 459 EQCVMSGHFDKKIRFWDIRSESIVREME-LLGKITALDLNPERTELLSCSRDDLLKIIDL 517
Query: 132 RSHSTEPIQIIDSFQ-DSVMSVCLTKTE---IIGGSVDGTVRTFDI---RVGRELSDDLG 184
R ++ F+ S + + + + GS +G++ + + +V + LS G
Sbjct: 518 RINAVRQTFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHG 577
Query: 185 QPVNCISMSNDGNCILA 201
+N ++ S G+ +++
Sbjct: 578 SSINAVAWSPSGSHVVS 594
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 203 (76.5 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 73/292 (25%), Positives = 128/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + ++ DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + ++ HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 190 (71.9 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D TI+LW+ +G I+T H V V + +
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW--- 129
++S D+ I W+V+TG ++ F GH V V+ N+ +++ S+ DQ++R W
Sbjct: 205 DHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVA 264
Query: 130 --DCRSHSTEPIQIID 143
+C++ E +++
Sbjct: 265 TKECKAELREHEHVVE 280
Score = 166 (63.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89
G + LS +D+TI++W+ G+ + T H VR V V ++SC D+ + WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
R + HE V ++ F++ + VV+ DQ+++ W+CR
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 147 (56.8 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 48/193 (24%), Positives = 79/193 (40%)
Query: 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96
G+ R + W P R H V V S ++S D I WD TG R
Sbjct: 86 GQKRDPKEWIP-RPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFER 144
Query: 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156
+GH V + F+ ++ S D +++ WD + E I+ + +V SV +
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVAIMP 202
Query: 157 T--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLD 212
I+ S D T++ +++ G + G V + + DG I +S D T+R+
Sbjct: 203 NGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWV 262
Query: 213 RSTGELLQEYKGH 225
+T E E + H
Sbjct: 263 VATKECKAELREH 275
Score = 128 (50.1 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 26/97 (26%), Positives = 47/97 (48%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + +G++ +S +D+TI++W G +KT+ H VR V D +
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110
+ S D+ + W V+T + R HE V + +
Sbjct: 248 LIASSSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Score = 123 (48.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS- 133
L+S D+ I WDVS G + GH++ V V + +VS D++LR WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNK 370
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
T+ + + F S + T ++ GSVD TV+ ++ R
Sbjct: 371 RCTKTLSAHEHFVTS-LDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 53 (23.7 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 17/81 (20%), Positives = 31/81 (38%)
Query: 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255
G +L+ D T+++ D S G L GH ++ + ++ ++D + W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGH--DNWVRGVLVHPGGKYIVSCADDKTLRIW 365
Query: 256 DLVDASVVAKFKAHSLVVKLL 276
D + AH V L
Sbjct: 366 DYKNKRCTKTLSAHEHFVTSL 386
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 203 (76.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 73/292 (25%), Positives = 128/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + ++ DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + ++ HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 203 (76.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 73/292 (25%), Positives = 128/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + ++ DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + ++ HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 203 (76.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 73/292 (25%), Positives = 128/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + ++ DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + ++ HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>UNIPROTKB|Q8TAF3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W HOVERGEN:HBG079413 OMA:NRLYSAG EMBL:AF468833
EMBL:AB040882 EMBL:AK297349 EMBL:AK298810 EMBL:AK302307
EMBL:AL162064 EMBL:AL832926 EMBL:BX649170 EMBL:BC026353
EMBL:BC037168 IPI:IPI00658079 IPI:IPI00658210 IPI:IPI00791758
IPI:IPI00792902 IPI:IPI00937128 PIR:T47168 RefSeq:NP_065890.1
UniGene:Hs.109778 ProteinModelPortal:Q8TAF3 SMR:Q8TAF3
IntAct:Q8TAF3 STRING:Q8TAF3 PhosphoSite:Q8TAF3 DMDM:74760390
PaxDb:Q8TAF3 PeptideAtlas:Q8TAF3 PRIDE:Q8TAF3
Ensembl:ENST00000302313 Ensembl:ENST00000396258
Ensembl:ENST00000544962 GeneID:57599 KEGG:hsa:57599 UCSC:uc003cit.3
UCSC:uc011ayt.1 UCSC:uc011ayu.1 UCSC:uc011ayv.1
GeneCards:GC03P039069 HGNC:HGNC:30914 HPA:HPA038421 MIM:612167
neXtProt:NX_Q8TAF3 PharmGKB:PA134956949 InParanoid:Q8TAF3
ChiTaRS:WDR48 GenomeRNAi:57599 NextBio:64214 ArrayExpress:Q8TAF3
Bgee:Q8TAF3 CleanEx:HS_WDR48 Genevestigator:Q8TAF3
GermOnline:ENSG00000114742 Uniprot:Q8TAF3
Length = 677
Score = 203 (76.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 73/292 (25%), Positives = 128/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + ++ DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + ++ HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>UNIPROTKB|F2Z5V5 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 KO:K15361
InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:CU856480
RefSeq:XP_003132167.1 UniGene:Ssc.3296 ProteinModelPortal:F2Z5V5
SMR:F2Z5V5 PRIDE:F2Z5V5 Ensembl:ENSSSCT00000012329 GeneID:100518629
KEGG:ssc:100518629 Uniprot:F2Z5V5
Length = 677
Score = 203 (76.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 73/292 (25%), Positives = 128/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + ++ DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + ++ HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>UNIPROTKB|Q5RAW8 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9601
"Pongo abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413
OMA:NRLYSAG EMBL:CR858893 RefSeq:NP_001125636.1 UniGene:Pab.18183
ProteinModelPortal:Q5RAW8 Ensembl:ENSPPYT00000016282
GeneID:100172554 KEGG:pon:100172554 InParanoid:Q5RAW8
Uniprot:Q5RAW8
Length = 677
Score = 203 (76.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 73/292 (25%), Positives = 128/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + ++ DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + ++ HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>UNIPROTKB|Q5F3K4 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9031
"Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W EMBL:AJ851646
IPI:IPI00571490 RefSeq:NP_001026135.1 UniGene:Gga.3234
ProteinModelPortal:Q5F3K4 STRING:Q5F3K4 Ensembl:ENSGALT00000031283
GeneID:420427 KEGG:gga:420427 GeneTree:ENSGT00520000055738
HOVERGEN:HBG079413 InParanoid:Q5F3K4 OMA:NRLYSAG NextBio:20823337
Uniprot:Q5F3K4
Length = 678
Score = 203 (76.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 73/292 (25%), Positives = 127/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V D+ + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + ++ DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + + HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 205 (77.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 43/129 (33%), Positives = 68/129 (52%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+GH G VL+ F+ DG S D+T+RLW+P G +T + H VR V + D
Sbjct: 733 LEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGR 792
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
L S D+ + WD +TG + + RGH V +V F+ ++ S +D+++R WD +
Sbjct: 793 LLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPAT 852
Query: 134 HSTEPIQII 142
+ + II
Sbjct: 853 GTLQQTLII 861
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/190 (27%), Positives = 86/190 (45%)
Query: 54 KTYKSHGREVRDV--HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
K + G E++ + H + + L S D + WD +TG + + GH V +V F+
Sbjct: 687 KVNEKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFS 746
Query: 112 EYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVR 169
++ S +D+++R WD + S + Q + + V SV + + GS D TVR
Sbjct: 747 PDGRLLASGSFDKTVRLWDPATGSLQ--QTLRGHSNWVRSVAFSPDGRLLASGSFDKTVR 804
Query: 170 TFDIRVGRELSDDL---GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEY--KG 224
+D G L L V ++ S DG + + D T+RL D +TG L Q KG
Sbjct: 805 LWDPATG-SLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKG 863
Query: 225 HICK-SFKTD 233
+ + F D
Sbjct: 864 TVTELQFSQD 873
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 52/194 (26%), Positives = 80/194 (41%)
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
V A + LI + W +V K+ G E + N +V+ S D+++R
Sbjct: 662 VFAPQTALIRSNFSEDLPSWICQLPKVNEKW-GAELQTLEGHSNSVWAVLASGSDDETVR 720
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDL-G 184
WD + S + Q ++ V+SV + + GS D TVR +D G L L G
Sbjct: 721 LWDPATGSLQ--QTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATG-SLQQTLRG 777
Query: 185 QP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242
V ++ S DG + + D T+RL D +TG L Q +GH +
Sbjct: 778 HSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGH--SDTVRSVAFSPDGRL 835
Query: 243 VTGGSEDGYIYFWD 256
+ GS D + WD
Sbjct: 836 LASGSFDKTVRLWD 849
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 42/168 (25%), Positives = 72/168 (42%)
Query: 115 SVVVSAGYDQSLRAWDCRSHSTEP-----IQIIDSFQDSVMSVCLTKTEIIGGSVDGTVR 169
+ ++ + + + L +W C+ +Q ++ +SV +V + GS D TVR
Sbjct: 667 TALIRSNFSEDLPSWICQLPKVNEKWGAELQTLEGHSNSVWAV------LASGSDDETVR 720
Query: 170 TFDIRVGRELSDDL-GQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
+D G L L G V ++ S DG + + D T+RL D +TG L Q +GH
Sbjct: 721 LWDPATG-SLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGH- 778
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVK 274
++ + + GS D + WD S+ + HS V+
Sbjct: 779 -SNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVR 825
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 201 (75.8 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 64/198 (32%), Positives = 97/198 (48%)
Query: 14 LKGHEGAVLAARFNGDGNYCL-SCGKDRTIRLW--NPHRGIHIKTYKSHGREVRDVHVTA 70
L GH+ V F +G+ L S +D+T+R+W N H G I+ H + V ++
Sbjct: 149 LSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKH-GKQIQVLSGHLQWVYCCSISP 207
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D S L S G++ +F W + + +IRK GH+S V + F+ S+++V+A YD S+ WD
Sbjct: 208 DCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWD 267
Query: 131 ------CRS-HSTE---PIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELS 180
RS H T+ P+ D S+ SVC + G TV D R+ R +
Sbjct: 268 PYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSPE----GLYLATVA--DDRLLRIWA 321
Query: 181 DDLGQPVNCISMSNDGNC 198
+L PV M+N G C
Sbjct: 322 LELKAPVAFAPMTN-GLC 338
Score = 140 (54.3 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 60/237 (25%), Positives = 101/237 (42%)
Query: 34 LSCG-KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSK-LISCGGDRQIFYWDVST 91
L+ G D I++W G+ + H VRD+ T + S L+S D+ + WD++
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNK 185
Query: 92 -GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVM 150
G+ I+ GH V + S++ SA ++S+ W RS++ I+ ++ Q SV+
Sbjct: 186 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTL--IRKLEGHQSSVV 243
Query: 151 SVCLTKTE--IIGGSVDGTVRTFDIRVGRELSD----DLGQPVNC--ISMSNDGN-CILA 201
S + ++ S D +V +D G L L PV+ + MS+ + C
Sbjct: 244 SCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSP 303
Query: 202 SCLDSTLRLLDRSTGELLQEYKGHICKSFKTD--CCLTNSDAHVTG-GSEDGYIYFW 255
L DR E K + + T+ CC V G+ DG++ FW
Sbjct: 304 EGLYLATVADDRLLRIWALELKAPVAFAPMTNGLCCTFFPHGGVIATGTRDGHVQFW 360
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 60/249 (24%), Positives = 110/249 (44%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH-GREV-- 63
P E + KG E +++ + G L K++T+ G+ + S R++
Sbjct: 56 PLEEQFIPKGFEAKSRSSKNDSKGRGSL---KEKTLDCGQIVWGLAFSPWPSPPSRKLWL 112
Query: 64 RDVHVTADNSKLISCGG--DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV-VSA 120
R D S LI G D QI W+V TG ++ GH+ V + F S++ VSA
Sbjct: 113 RHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSA 172
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIR---V 175
D++LR WD H + IQ++ V ++ + + + + +V + +R +
Sbjct: 173 SRDKTLRIWDLNKHGKQ-IQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTL 231
Query: 176 GRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC 235
R+L V+C S D ++ + D+++ + D TGE L+ H + +
Sbjct: 232 IRKLEGHQSSVVSC-DFSPDSALLVTASYDTSVIMWDPYTGERLRSLH-HT----QLEAP 285
Query: 236 LTNSDAHVT 244
+ +SD H++
Sbjct: 286 VDDSDVHMS 294
>DICTYBASE|DDB_G0278945 [details] [associations]
symbol:DDB_G0278945 "WD repeat-containing protein 82"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278945 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030587 EMBL:AAFI02000024 KO:K14962 OMA:CTNMAFW
RefSeq:XP_641992.1 ProteinModelPortal:Q54XN8 STRING:Q54XN8
EnsemblProtists:DDB0218126 GeneID:8621724 KEGG:ddi:DDB_G0278945
InParanoid:Q54XN8 ProtClustDB:CLSZ2729103 Uniprot:Q54XN8
Length = 319
Score = 199 (75.1 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 74/267 (27%), Positives = 123/267 (46%)
Query: 26 FNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGG----D 81
FN DG+ ++ D +I L+N G KT S V + T +N+ +I C D
Sbjct: 34 FNKDGSLLITASDDESIHLYNIDTGELQKTLNSKKYGVDLIKFTHNNNSII-CASKNSWD 92
Query: 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQI 141
+ Y + + ++ F+GH ++V ++ + + + +S D ++R WD R++ + +
Sbjct: 93 ESLRYLSLHDNKYLKYFKGHRNKVVSISMSPINDMFLSGSLDDTIRMWDLRTNVCQGLLR 152
Query: 142 IDSFQDSVMSVCLTKTEII-GGSVD-GTVRTFDIR---VG--RELSDDLGQPVNCISM-- 192
++ +V II +V T++ +D+R G S D PV SM
Sbjct: 153 ----RNGRPAVSFDPQGIIFATAVSVNTIKLYDLRNYDKGPFSSFSIDHPIPVEWTSMKF 208
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTD--CCLTNS---DA-HVTGG 246
+ DG IL S + + L+D TGE+ Q Y SFK D + +S DA +V G
Sbjct: 209 TADGKYILLSTKTNIIFLIDSFTGEVKQRYT-----SFKNDNGSVIESSFSPDAQYVLSG 263
Query: 247 SEDGYIYFWDLVDASVVAKFKAHSLVV 273
SEDG ++ W + VA + HS V
Sbjct: 264 SEDGTVHIWKTLTGEEVAVWGGHSSTV 290
Score = 119 (46.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 45/183 (24%), Positives = 87/183 (47%)
Query: 41 TIRLW-NPHRGIHI-KTYKSHGREV-RDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97
T+RL N + + I K +K V + D S LI+ D I +++ TG + +
Sbjct: 4 TLRLTDNVVQNMGIGKLHKDDNSSVINSMDFNKDGSLLITASDDESIHLYNIDTGELQKT 63
Query: 98 FRGHESEVNAVKFNEYSSVVVSAG---YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL 154
+ V+ +KF ++ ++ A +D+SLR H + ++ ++ V+S+ +
Sbjct: 64 LNSKKYGVDLIKFTHNNNSIICASKNSWDESLRYLSL--HDNKYLKYFKGHRNKVVSISM 121
Query: 155 TKTE--IIGGSVDGTVRTFDIR--VGRELSDDLGQPVNCISMSNDGNCILASCLD-STLR 209
+ + GS+D T+R +D+R V + L G+P +S G I A+ + +T++
Sbjct: 122 SPINDMFLSGSLDDTIRMWDLRTNVCQGLLRRNGRPA--VSFDPQG-IIFATAVSVNTIK 178
Query: 210 LLD 212
L D
Sbjct: 179 LYD 181
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 198 (74.8 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 67/255 (26%), Positives = 114/255 (44%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH V + D +Y LS D+TIRLW+ +G + H +V V ++ DN
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNR 118
Query: 74 KLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKF--NEYSSVVVSAGYDQSLRAWD 130
+++S D+ I W++ + GH V+ V+F N + VSAG+D++++ WD
Sbjct: 119 QVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWD 178
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGREL-SDDLGQPVNC 189
+ S + S +++ + G DGT+ +D+ L S + +N
Sbjct: 179 LETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINA 238
Query: 190 ISMSNDGNCILASCLDSTLRLLDRSTGELLQE----YKGHICKSFKTDCC-LTNSDAHVT 244
+ S + + A+ S++R+ D T E + E + G KS + +C LT S T
Sbjct: 239 LVFSPNRYWLCAAT-GSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQT 297
Query: 245 --GGSEDGYIYFWDL 257
G D I W +
Sbjct: 298 LFSGWTDNLIRVWQV 312
Score = 155 (59.6 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 59/237 (24%), Positives = 105/237 (44%)
Query: 55 TYKSHGREVRDVHVTADNSKLISCGG-DRQIFYW-----DVSTGRVIRKFRGHESEVNAV 108
T + H V + +N ++ G D+ I W DV+ G R+ GH V+
Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDC 69
Query: 109 KFNEYSSVVVSAGYDQSLRAWDC-RSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVD 165
+ S +SA +D+++R WD + T Q + D V+SV ++ +++ GS D
Sbjct: 70 ALSFDSHYALSASWDKTIRLWDLEKGECTH--QFVGHTSD-VLSVSISPDNRQVVSGSRD 126
Query: 166 GTVRTFDIRVG--RELSDDLGQP--VNCISMS-NDGNCILASC-LDSTLRLLDRSTGELL 219
T++ ++I +G + D G V+C+ S N N S D +++ D T L
Sbjct: 127 KTIKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLR 185
Query: 220 QEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA----SVVAKFKAHSLV 272
+ GH + + ++ + G DG + WDL ++ S+ AK ++LV
Sbjct: 186 TSHYGHT--GYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALV 240
Score = 152 (58.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 57/227 (25%), Positives = 97/227 (42%)
Query: 14 LKGHEGAVLAARFNGDG-NYCLSCGKDRTIRLWNPHR-----GIHIKTYKSHGREVRDVH 67
L+GH G V + + + LS +D++I LWN R G+ + H V D
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA 70
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
++ D+ +S D+ I WD+ G +F GH S+V +V + + VVS D++++
Sbjct: 71 LSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIK 130
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDIRVGRELSDDL 183
W+ + I D V V + + D V+ +D+ +
Sbjct: 131 IWNIIGNCKYTITD-GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHY 189
Query: 184 GQP--VNCISMSNDGNCILASCLDSTLRL--LDRSTGELLQEYKGHI 226
G V+ +++S DG+ + D TL L L+ ST E K +I
Sbjct: 190 GHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANI 236
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 202 (76.2 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 52/212 (24%), Positives = 103/212 (48%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
TE +L+GH G V + RF D + LSC +D +IR W+ + Y+ H V D+ +
Sbjct: 351 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 410
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ + S DR W +R + GH ++V+ VKF+ S+ + + D+++R
Sbjct: 411 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 470
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
W + ++ +++ + V+S+ + + D ++ +D+ G + G
Sbjct: 471 WSAQQGNS--VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 528
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD-RST 215
N S+ S D + I ++ +D+++R+ D R+T
Sbjct: 529 DNITSLTFSPDSSLIASASMDNSVRVWDIRNT 560
Score = 182 (69.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/212 (25%), Positives = 90/212 (42%)
Query: 50 GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK 109
G +K + H V AD+S L+SC D I YWD+ + ++GH V +
Sbjct: 350 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 409
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGT 167
+ YS S +D++ R W T P++I V V + GS D T
Sbjct: 410 ISPYSLYFASGSHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 467
Query: 168 VRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
VR + + G + G PV ++ S +G + ++ D L+L D ++G L +E +GH
Sbjct: 468 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGH 527
Query: 226 ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T + + + S D + WD+
Sbjct: 528 TDNI--TSLTFSPDSSLIASASMDNSVRVWDI 557
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 52/240 (21%), Positives = 99/240 (41%)
Query: 34 LSCGKDRT-IRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG 92
L+ G D + I+LW+ R +K+ + H +V +H+ D ++ D D + G
Sbjct: 301 LAAGFDNSCIKLWSL-RSKKLKS-EPHQVDVSRIHLACD---ILEEEDDE-----DDNAG 350
Query: 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV 152
++ RGH V + +F SS ++S D S+R WD S + + ++ + +
Sbjct: 351 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 410
Query: 153 CLTKTEIIGGSVDGTVR--TFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRL 210
GS D T R +FD + V+C+ + N + D T+RL
Sbjct: 411 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 470
Query: 211 LDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
G ++ + GH + + + ++ ED + WDL ++ + + H+
Sbjct: 471 WSAQQGNSVRLFTGH--RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 528
Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 30/115 (26%), Positives = 56/115 (48%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH G VL+ F+ +G Y S G+D+ ++LW+ G K + H + + + D+S +
Sbjct: 484 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLI 543
Query: 76 ISCGGDRQIFYWDV-----------STGRVIRKFRGHESEVNAVKFNEYSSVVVS 119
S D + WD+ S+G ++ + G S V +V+F + ++V+
Sbjct: 544 ASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVT 598
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 202 (76.2 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 74/267 (27%), Positives = 111/267 (41%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH V F D ++ D+TIR+WN G I TY+ H V + V +
Sbjct: 338 LSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSV--LSVDSYQK 393
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S D+ + W V + R RGH VN VK + S S D ++R WD R+
Sbjct: 394 VIVSGSADKTVKVWHVES-RTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRT 452
Query: 134 HSTEPIQIIDSFQDSVMSVC-LTKTEIIGGSVDGTV---RTFDIRVGRELSDDLGQPVNC 189
+S +++ V + LT ++ + D T D + +D+ P N
Sbjct: 453 NSC--LKVFRGHVGQVQKIIPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNE 510
Query: 190 ISMSNDGNCI----LASC-LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244
D N L SC LD+T++L D TG+ ++ GH+ + D N +
Sbjct: 511 QETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVW--DIAADNF--RII 566
Query: 245 GGSEDGYIYFWDLVDASVVAKFKAHSL 271
GS DG I WDL + F L
Sbjct: 567 SGSHDGSIKVWDLQSGKCMHTFNGRRL 593
Score = 170 (64.9 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 58/205 (28%), Positives = 96/205 (46%)
Query: 53 IKTYKSHGREVRDVHVTADNSKLISCGG-DRQIFYWDVSTGRVIRKFRGHESEVNAVKFN 111
I+ +K H V + N +L+ G D I WD+ TG++IR+ GH V + F+
Sbjct: 295 IQEFKGHMDGVLTLQF---NYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFD 351
Query: 112 EYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTF 171
+ +++ D+++R W+ + E I DSV+SV + I+ GS D TV+ +
Sbjct: 352 DRK--LITGSLDKTIRVWNYITG--ECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVW 407
Query: 172 DIRVGRELSDDLGQP--VNCISMSNDG-NCILASCLD-STLRLLDRSTGELLQEYKGHIC 227
+ R G VNC+ + +C SC D +T+R+ D T L+ ++GH+
Sbjct: 408 HVE-SRTCYTLRGHTEWVNCVKLHPKSFSCF--SCSDDTTIRMWDIRTNSCLKVFRGHVG 464
Query: 228 KSFKTDCCLTNSDAH--VTGGSEDG 250
+ K LT D T + DG
Sbjct: 465 QVQKI-IPLTIKDVENLATDNTSDG 488
Score = 151 (58.2 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSK 74
KGH VL +FN + D TI +W+ G I+ H V+ ++ D+ K
Sbjct: 299 KGHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF--DDRK 354
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
LI+ D+ I W+ TG I +RGH V +V + Y V+VS D++++ W S
Sbjct: 355 LITGSLDKTIRVWNYITGECISTYRGHSDSVLSV--DSYQKVIVSGSADKTVKVWHVESR 412
Query: 135 STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
+ ++ + + V + S D T+R +DIR
Sbjct: 413 TCYTLRGHTEWVNCV-KLHPKSFSCFSCSDDTTIRMWDIR 451
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 198 (74.8 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 64/255 (25%), Positives = 113/255 (44%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTAD 71
++ H+G V + F+ DG Y S D TI + N + I + H V D
Sbjct: 32 LINSHKGEVYSINFSSDGKYIASSSFDMTIMVHNVYNECETIGVLRGHKNAVLQAKWLQD 91
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++ + S D ++F WDV +R F+GH++ VN + ++ + VS D +L+ WD
Sbjct: 92 DNYICSASADHKLFLWDVECESKLRSFKGHDNIVNGLDIINHN-LFVSCSDDNTLKFWDI 150
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKT-EIIGGS-VDGTVRTFDIRVGRELSDD-LGQP-- 186
RS + II ++SVC K E + S VD T++ +D + +L D +G
Sbjct: 151 RSKWA--VHII-KHDFPLLSVCSDKKGEFLFTSCVDNTIKKYDCK-NYKLKDTFIGHKDY 206
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI-CKSFKTDCCLT----NSDA 241
+ + ++ D + + D ++ D ++ + + D L N+D
Sbjct: 207 ITGLDINKDETMLASISADESICFWDIQPFSCEEKLLFQLNSPKYNIDYNLIKLSFNNDN 266
Query: 242 HVTGGSEDGYIYFWD 256
+ GS D Y+Y +D
Sbjct: 267 LLACGSGDNYLYIYD 281
Score = 164 (62.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 51/224 (22%), Positives = 102/224 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL+GH+ AVL A++ D NY S D + LW+ ++++K H V + + N
Sbjct: 75 VLRGHKNAVLQAKWLQDDNYICSASADHKLFLWDVECESKLRSFKGHDNIVNGLDIINHN 134
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+SC D + +WD+ + + + H+ + +V ++ + ++ D +++ +DC+
Sbjct: 135 L-FVSCSDDNTLKFWDIRSKWAVHIIK-HDFPLLSVCSDKKGEFLFTSCVDNTIKKYDCK 192
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSV--DGTVRTFDIR---VGRELSDDLGQP- 186
++ + I +D + + + K E + S+ D ++ +DI+ +L L P
Sbjct: 193 NYKLKDTFI--GHKDYITGLDINKDETMLASISADESICFWDIQPFSCEEKLLFQLNSPK 250
Query: 187 ----VNCISMS-NDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
N I +S N+ N + D+ L + D L GH
Sbjct: 251 YNIDYNLIKLSFNNDNLLACGSGDNYLYIYDYKQKILKYSLPGH 294
Score = 140 (54.3 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 48/205 (23%), Positives = 86/205 (41%)
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDV-STGRVIRKFRGHESEVNAVKFNEYSSV 116
SH EV ++ ++D + S D I +V + I RGH++ V K+ + +
Sbjct: 35 SHKGEVYSINFSSDGKYIASSSFDMTIMVHNVYNECETIGVLRGHKNAVLQAKWLQDDNY 94
Query: 117 VVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEI-IGGSVDGTVRTFDIR- 174
+ SA D L WD S ++ + V + + + + S D T++ +DIR
Sbjct: 95 ICSASADHKLFLWDVECESK--LRSFKGHDNIVNGLDIINHNLFVSCSDDNTLKFWDIRS 152
Query: 175 --VGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKT 232
+ D P+ + G + SC+D+T++ D +L + GH K + T
Sbjct: 153 KWAVHIIKHDF--PLLSVCSDKKGEFLFTSCVDNTIKKYDCKNYKLKDTFIGH--KDYIT 208
Query: 233 DCCLTNSDAHVTGGSEDGYIYFWDL 257
+ + + S D I FWD+
Sbjct: 209 GLDINKDETMLASISADESICFWDI 233
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 202 (76.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 74/292 (25%), Positives = 127/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V DV + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + + DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + ++ HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 202 (76.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 74/292 (25%), Positives = 127/292 (43%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW--NPHR-GIHIKTYK 57
+ VS + R E V K + V A + + N + G+D IR+W N H+ +I + +
Sbjct: 15 VQVSYVIRDE--VEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASME 72
Query: 58 SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
H V DV + + LIS D + W+ G + R H+ V A+ + + +V
Sbjct: 73 HHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELV 132
Query: 118 VSAGYDQSLRAWDCR-------SHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168
SAG D+ + WD S++T + +DS+ S+ + + T I+ GS + +
Sbjct: 133 ASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVL 192
Query: 169 RTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226
R +D R +L G V + + DG L+ D T+RL + Y+ H
Sbjct: 193 RVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Query: 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---VAKFKAHSLVVKL 275
+ + ++ HV G D IY DL + + + + KA L ++L
Sbjct: 253 EGVWALQ--VNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMEL 302
>WB|WBGene00001232 [details] [associations]
symbol:eif-3.I species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0006915 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0000003 GO:GO:0003743
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:FO081786
RefSeq:NP_490988.2 ProteinModelPortal:Q965S8 SMR:Q965S8
STRING:Q965S8 PaxDb:Q965S8 EnsemblMetazoa:Y74C10AR.1 GeneID:171809
KEGG:cel:CELE_Y74C10AR.1 UCSC:Y74C10AR.1 CTD:171809
WormBase:Y74C10AR.1 InParanoid:Q965S8 NextBio:872787 Uniprot:Q965S8
Length = 327
Score = 198 (74.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 62/251 (24%), Positives = 115/251 (45%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
LKGHE A+ RFN +G+ SC KD+ +W G I +Y H V D+ V+ D +
Sbjct: 6 LKGHERALTRVRFNREGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDIDVSWDTT 65
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV--VSAGYDQSLRAWDC 131
K ++ GD + WD G + H++ + + F+ ++V + ++L +
Sbjct: 66 KCVTASGDLTVKIWDAELGNCLYTIN-HQTPMKSCGFSYSGNLVCFTTQKMTKNLSTFQV 124
Query: 132 RS--HSTEPIQIIDSFQDSVMSVCLTKT------EIIG-GSVDGTVRTFDIR---VGREL 179
R S++ ++ +SF S V T +++ G G ++ +D+R
Sbjct: 125 RDLRDSSQMVEGGESFFYSQFDVNATTALFTQMDDLVTIGFESGLLQQYDLRNPDTPIHT 184
Query: 180 SDDLGQ-PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238
++ + + V + +S G+ ++++ D T LLD + + L++YK + + C N
Sbjct: 185 NESVHRYSVQDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQYKSE--RPVNSACISPN 242
Query: 239 SDAHVTGGSED 249
D GG ED
Sbjct: 243 RDHICLGGGED 253
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 201 (75.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 63/268 (23%), Positives = 117/268 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GH G+VL ++ D ++ D T+R+W+ + G + T H V +H+ N
Sbjct: 260 ILTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAV--LHLRFCN 315
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 316 GLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 373
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 374 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 431
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + +C + L +
Sbjct: 432 RCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ 489
Query: 243 VTGGSEDGYIYFWDLVDASVVAKFKAHS 270
+ S D I WD ++ S + + S
Sbjct: 490 IISSSHDDTILIWDFLNVSTNGQTEGRS 517
Score = 179 (68.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 45/166 (27%), Positives = 82/166 (49%)
Query: 12 NVLKGHEGAVLAARF-NGDGNYCLSCGKDRTIRLWN--PHRGIHIKTYKSHGREVRDVHV 68
N L H AVL RF NG ++C KDR+I +W+ I ++ R +V V
Sbjct: 299 NTLIHHNEAVLHLRFCNG---LMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNV-V 354
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 355 DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 412
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 413 WDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 456
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 51/211 (24%), Positives = 96/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD T ++ GH V ++++E V+V+ D ++R WD
Sbjct: 234 DDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 291
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
+S E + + ++V+ + ++ S D ++ +D+ ++S +G
Sbjct: 292 V--NSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRA 349
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 350 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 403
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 434
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 201 (75.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 63/259 (24%), Positives = 113/259 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL GH G+VL ++ D ++ D T+R+W+ G + T H V +H+ N
Sbjct: 260 VLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAV--LHLRFCN 315
Query: 73 SKLISCGGDRQIFYWDVSTGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
+++C DR I WD+++ I R GH + VN V F++ +VSA D++++ W
Sbjct: 316 GLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVW 373
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP--V 187
+ + E ++ ++ + + + ++ GS D T+R +DI G L G V
Sbjct: 374 S--TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 431
Query: 188 NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-----LTNSDAH 242
CI N I++ D +++ D + +C + L +
Sbjct: 432 RCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ 489
Query: 243 VTGGSEDGYIYFWDLVDAS 261
+ S D I WD ++ S
Sbjct: 490 IISSSHDDTILIWDFLNVS 508
Score = 180 (68.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 46/167 (27%), Positives = 82/167 (49%)
Query: 12 NVLKGHEGAVLAARF-NGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK---SHGREVRDVH 67
N L H AVL RF NG ++C KDR+I +W+ I + H R +V
Sbjct: 299 NTLIHHNEAVLHLRFCNG---LMVTCSKDRSIAVWDMASATDISLRRVLVGH-RAAVNV- 353
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
V D+ ++S GDR I W ST +R GH+ + +++ + +VVS D ++R
Sbjct: 354 VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIR 411
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIR 174
WD + +++++ ++ V + I+ G+ DG ++ +D++
Sbjct: 412 LWDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQ 456
Score = 150 (57.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 50/211 (23%), Positives = 95/211 (45%)
Query: 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130
D+ K+IS D I WD + ++ GH V ++++E V+V+ D ++R WD
Sbjct: 234 DDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 291
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD---LGQ-- 185
S E + + ++V+ + ++ S D ++ +D+ ++S +G
Sbjct: 292 VSSG--EVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRA 349
Query: 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245
VN + D I+++ D T+++ ST E ++ GH K + CL D V
Sbjct: 350 AVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--K--RGIACLQYRDRLVVS 403
Query: 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
GS D I WD+ + + + H +V+ +
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHEELVRCI 434
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 201 (75.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 52/216 (24%), Positives = 103/216 (47%)
Query: 5 DLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
D TE +L+GH G V + RF D + LSC +D +IR W+ + Y+ H V
Sbjct: 329 DSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVW 388
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
D+ ++ + S DR W +R + GH +V+ VKF+ S+ + + D+
Sbjct: 389 DLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDK 448
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDD 182
++R W + ++ +++ + V+++ + + D ++ +D+ G +
Sbjct: 449 TVRLWSTQQGNS--VRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 506
Query: 183 LGQPVNCISM--SNDGNCILASCLDSTLRLLD-RST 215
G N S+ S D + I ++ +D+++R+ D R+T
Sbjct: 507 RGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNT 542
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/185 (21%), Positives = 73/185 (39%)
Query: 88 DVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD 147
D S G ++ RGH V + +F SS ++S D S+R WD RS + + ++
Sbjct: 328 DDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPV 387
Query: 148 SVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLD 205
+ + S D T R + L G V+C+ + N + D
Sbjct: 388 WDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTD 447
Query: 206 STLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAK 265
T+RL G ++ + GH + + + ++ ED + WDL ++ +
Sbjct: 448 KTVRLWSTQQGNSVRLFTGH--RGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 505
Query: 266 FKAHS 270
+ H+
Sbjct: 506 LRGHT 510
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH G VLA F+ +G Y S G+D+ ++LW+ G K + H + + + D+S +
Sbjct: 466 GHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLI 525
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAV 108
S D + WD+ G SE+ V
Sbjct: 526 ASASMDNSVRVWDIRNTYCNAPADGSSSELVGV 558
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 43/170 (25%), Positives = 76/170 (44%)
Query: 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHG 60
++ SD +K H+ V A + + DG S +D+TI+LW+ G + + H
Sbjct: 448 LNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHR 507
Query: 61 REVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSA 120
R V + +L S GDR I W+V T + ++ GH + + + + VVSA
Sbjct: 508 RGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSA 567
Query: 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVC--LTKTEIIGGSVDGTV 168
D ++ W S E + +D+ +D V ++ + ++ G D V
Sbjct: 568 AADGLVKVWSLSSG--ECVATLDNHEDRVWALASRFDGSLLVSGGADAVV 615
Score = 150 (57.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 38/167 (22%), Positives = 80/167 (47%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
++ K + V A D ++ + R + ++ G IK+ K+H V + +
Sbjct: 55 SIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPT 114
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV-VVSAGYDQS-LRAW 129
N+ L + G + + WD++ V FRGH ++A+ F ++ + V+++G D S +R W
Sbjct: 115 NTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLW 174
Query: 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
D +S+ + + + + + T ++ GS D TV+ ++I+
Sbjct: 175 DL--NSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 33/117 (28%), Positives = 53/117 (45%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
VL+GH V A FN S DRTIR+WN ++T + H + + +
Sbjct: 502 VLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQG 561
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
++++S D + W +S+G + HE V A+ S++VS G D + W
Sbjct: 562 TQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 56/288 (19%), Positives = 115/288 (39%)
Query: 1 MSVSDLPR-TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH 59
+++ ++P +K HE V+ + + G + +++W+ +++ H
Sbjct: 85 LTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGH 144
Query: 60 GREVRDVHVTA-DNSKLISCGGD-RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
G + + N+ +++ G D ++ WD+++ R + F GH S + + F S +
Sbjct: 145 GGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFL 204
Query: 118 VSAGYDQSLRAWDCRSHST-EPIQIIDSFQDSVMSVCLTKTEIIGGSVDGT-VRTFDIRV 175
+S D++++ W+ + S I + S + + +I+ + +G + +D +
Sbjct: 205 LSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKS 264
Query: 176 GRELS---DDLGQPVNCIS--MSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSF 230
G L D N I + N +L+ D +L L R GE K + SF
Sbjct: 265 GSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLLRKRVPGEGFITIK-KLNGSF 323
Query: 231 KT--DCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
DC D H+ S +I V + H+ +V L
Sbjct: 324 DEVIDCAWIGDD-HLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTL 370
Score = 108 (43.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
VN I +S DG I ++ D T++L D STGE++ +GH + C + G
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGH--RRGVWACSFNPFSRQLASG 525
Query: 247 SEDGYIYFWDLVDASVVAKFKAHS-LVVKLL 276
S D I W++ V + H+ ++KL+
Sbjct: 526 SGDRTIRIWNVDTQQCVQTLEGHTGAILKLI 556
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 172 (65.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 36/117 (30%), Positives = 55/117 (47%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADN 72
LKGH +V F+ G SC D +I+LW+ + IKT H V V
Sbjct: 146 LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAG 205
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
++S DR I W+V+TG ++ + GH V V+ + S+ + DQ++R W
Sbjct: 206 DYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 162 (62.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 38/127 (29%), Positives = 60/127 (47%)
Query: 6 LPRT-EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVR 64
+PR E L GH ++ F+ +S +D TIR+W+ G + ++ K H V+
Sbjct: 95 IPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQ 154
Query: 65 DVHVTADNSKLISCGGDRQIFYWDVSTG-RVIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123
DV A L SC D I WD I+ GH+ V++V F V+SA D
Sbjct: 155 DVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRD 214
Query: 124 QSLRAWD 130
++++ W+
Sbjct: 215 RTIKMWE 221
Score = 151 (58.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 7 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV 66
P A+ + GA + + G + S +D+TIR+W+ G+ + T H VR +
Sbjct: 287 PEAAASAINEAAGAD-NKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGL 345
Query: 67 HVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSL 126
L+S D+ I WD+ R ++ H+ ++ F++ V+S DQ++
Sbjct: 346 AFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTV 405
Query: 127 RAWDCR 132
+ W+CR
Sbjct: 406 KVWECR 411
Score = 141 (54.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
+ GH+ V + F G+Y LS +DRTI++W G +KTY H VR V V + S
Sbjct: 189 MHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGS 248
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAV 108
+C D+ I W ++ + R HE V +
Sbjct: 249 IFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECI 283
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/102 (31%), Positives = 52/102 (50%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L S D+ I WDVS G + GH++ V + F+ +VSA D+++R WD R+
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 135 STEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIR 174
++ + + Q S+ K +I GSVD TV+ ++ R
Sbjct: 372 RC--MKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 112 (44.5 bits), Expect = 0.00097, P = 0.00097
Identities = 32/131 (24%), Positives = 66/131 (50%)
Query: 100 GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL-TKTE 158
GH + + V F+ +++VSA D ++R WD + E + + DSV V + +
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYE--RSLKGHTDSVQDVAFDAQGK 163
Query: 159 IIGG-SVDGTVRTFDIRVGRELSDDL-GQPVNCISMS--NDGNCILASCLDSTLRLLDRS 214
++ S D +++ +D + E + G N S++ G+ +L++ D T+++ + +
Sbjct: 164 LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVA 223
Query: 215 TGELLQEYKGH 225
TG ++ Y GH
Sbjct: 224 TGYCVKTYTGH 234
Score = 72 (30.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 159 IIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTG 216
+ GS D T+R +D+ VG L G V ++ G ++++ D T+R+ D
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 217 ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256
++ H + F T + +V GS D + W+
Sbjct: 372 RCMKTLYAH--QHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 59 (25.8 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 194 NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253
+ G + + D T+R+ D S G L GH ++ ++ S+D I
Sbjct: 307 HQGPFLASGSRDKTIRIWDVSVGLCLLTLSGH--DNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 254 FWDLVDASVVAKFKAH 269
WDL + + AH
Sbjct: 365 VWDLRNKRCMKTLYAH 380
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 201 (75.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 52/212 (24%), Positives = 102/212 (48%)
Query: 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV 68
TE +L+GH G V + RF D + LSC +D +IR W+ + Y+ H V D+ +
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 392
Query: 69 TADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128
+ + S DR W +R + GH ++V+ VKF+ S+ + + D+++R
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQP 186
W + ++ +++ + V+S+ + + D ++ +D+ G + G
Sbjct: 453 WSAQQGNS--VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 510
Query: 187 VNCISM--SNDGNCILASCLDSTLRLLD-RST 215
N S+ S D I ++ +D+++R+ D R+T
Sbjct: 511 DNITSLTFSPDSGLIASASMDNSVRVWDIRNT 542
Score = 181 (68.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 55/212 (25%), Positives = 89/212 (41%)
Query: 50 GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK 109
G +K + H V AD+S L+SC D I YWD+ + ++GH V +
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 391
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTEIIGGSVDGT 167
+ YS S +D++ R W T P++I V V + GS D T
Sbjct: 392 ISPYSLYFASGSHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 168 VRTFDIRVGRELSDDLGQ--PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
VR + + G + G PV ++ S +G + ++ D L+L D ++G L +E +GH
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGH 509
Query: 226 ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257
T + + S D + WD+
Sbjct: 510 TDNI--TSLTFSPDSGLIASASMDNSVRVWDI 539
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 52/240 (21%), Positives = 99/240 (41%)
Query: 34 LSCGKDRT-IRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG 92
L+ G D + I+LW+ R +K+ + H +V +H+ D ++ D D + G
Sbjct: 283 LAAGFDNSCIKLWSL-RSKKLKS-EPHQVDVSRIHLACD---ILEEEDDE-----DDNAG 332
Query: 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSV 152
++ RGH V + +F SS ++S D S+R WD S + + ++ + +
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 392
Query: 153 CLTKTEIIGGSVDGTVR--TFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRL 210
GS D T R +FD + V+C+ + N + D T+RL
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 211 LDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270
G ++ + GH + + + ++ ED + WDL ++ + + H+
Sbjct: 453 WSAQQGNSVRLFTGH--RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 510
Score = 125 (49.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH G VL+ F+ +G Y S G+D+ ++LW+ G K + H + + + D+ +
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLI 525
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV 117
S D + WD+ G SE+ V + S+V+
Sbjct: 526 ASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVL 567
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 58/220 (26%), Positives = 91/220 (41%)
Query: 2 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTY 56
S+ +L E NV L GH G + RF D S G D T LW+ G T+
Sbjct: 22 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTF 80
Query: 57 KSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116
H +V + + D +S D WDV G + F GHES++NA+ F +
Sbjct: 81 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 140
Query: 117 VVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE--IIGGSVDGTVRTFDI- 173
+ D + R +D R+ D+ + SV +K+ ++ G D +D
Sbjct: 141 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 200
Query: 174 ---RVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRL 210
R G D V+C+ +++DG + DS L++
Sbjct: 201 KADRAGVLAGHD--NRVSCLGVTDDGMAVATGSWDSFLKI 238
Score = 173 (66.0 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 58/243 (23%), Positives = 98/243 (40%)
Query: 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDV--HVT-------ADNSKLISCGG 80
GNY G D ++N +KT + + R R++ H D++++++ G
Sbjct: 9 GNYVACGGLDNICSIYN------LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG 62
Query: 81 DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ 140
D WD+ TG+ F GH +V ++ + + VS D S + WD R Q
Sbjct: 63 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR--Q 120
Query: 141 IIDSFQDSVMSVCL--TKTEIIGGSVDGTVRTFDIRVGRELS----DDLGQPVNCISMSN 194
+ + ++C GS D T R FD+R +EL D++ + +S S
Sbjct: 121 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 180
Query: 195 DGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-LTNSDAHVTGGSEDGYIY 253
G +LA D + D + GH + C +T+ V GS D ++
Sbjct: 181 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH---DNRVSCLGVTDDGMAVATGSWDSFLK 237
Query: 254 FWD 256
W+
Sbjct: 238 IWN 240
Score = 137 (53.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 54/218 (24%), Positives = 90/218 (41%)
Query: 70 ADNSKLISCGG-DRQIFYWDVST--G--RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124
A + ++CGG D +++ T G RV R+ GH ++ +F + + +V S+G D
Sbjct: 6 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DT 64
Query: 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK-TEI-IGGSVDGTVRTFDIRVG--RELS 180
+ WD + + VMS+ L T + + G+ D + + +D+R G R+
Sbjct: 65 TCALWDIETG--QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF 122
Query: 181 DDLGQPVNCISMSNDGNCILASCLDSTLRLLD-RSTGELLQ-EYKGHICKSFKTDCCLTN 238
+N I +GN D+T RL D R+ EL+ + IC T +
Sbjct: 123 TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI--TSVSFSK 180
Query: 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276
S + G +D WD + A H V L
Sbjct: 181 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCL 218
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 200 (75.5 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 62/243 (25%), Positives = 106/243 (43%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L+GH V +F D +S D+TIR+WN I H V + +T D+
Sbjct: 308 LLEGHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSV--LCLTFDS 363
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+ L+S D + W S G+ I RGH VN+V+ +V+S D +++ W
Sbjct: 364 TLLVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLE 422
Query: 133 SHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISM 192
+++ + + V S+ L + + S+DGT++ +DI + + G +
Sbjct: 423 TNTC--LHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEI 480
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
+ D +++ D +++ + E + K H T L D V GSEDG I
Sbjct: 481 AADHLRLISGAHDGVVKVWEAC--ECVHTLKNH--SEPVTSVAL--GDCEVVSGSEDGKI 534
Query: 253 YFW 255
Y W
Sbjct: 535 YLW 537
Score = 180 (68.4 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 52/197 (26%), Positives = 91/197 (46%)
Query: 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
L S D I W+++T + + GH S V ++F++ ++S D+++R W+ R+
Sbjct: 286 LASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRT- 342
Query: 135 STEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELS--DDLGQPVNCISM 192
+E I I+ DSV+ + T ++ GS D TV+ + G+ ++ G PVN + +
Sbjct: 343 -SECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTG-PVNSVRI 400
Query: 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252
D +L+ DST+++ T L + HI L +D+ + S DG I
Sbjct: 401 IRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQS----LALADSRLFSCSLDGTI 456
Query: 253 YFWDLVDASVVAKFKAH 269
WD+ V H
Sbjct: 457 KQWDIEKKKCVHTLFGH 473
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 43/191 (22%), Positives = 79/191 (41%)
Query: 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD 71
++L GH +VL F D +S D T++LW+ G I T + H V V + D
Sbjct: 347 SILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRD 403
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
++S D I W + T + F H V ++ + S + S D +++ WD
Sbjct: 404 RGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALAD--SRLFSCSLDGTIKQWDI 461
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCIS 191
+ + + V + +I G+ DG V+ ++ + +PV ++
Sbjct: 462 EKKKC--VHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEACECVHTLKNHSEPVTSVA 519
Query: 192 MSNDGNCILAS 202
+ G+C + S
Sbjct: 520 L---GDCEVVS 527
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/170 (21%), Positives = 75/170 (44%)
Query: 100 GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEI 159
GH V ++ +++ S YD ++R W+ + + + +++ V + + ++
Sbjct: 271 GHSDGVMCLQL--VRNILASGSYDATIRLWNLATF--QQVALLEGHSSGVTCLQFDQCKL 326
Query: 160 IGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219
I GS+D T+R ++ R +S G + + ++ D +++ D T++L S G+ +
Sbjct: 327 ISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRI 386
Query: 220 QEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269
+GH + V GS+D I W L + + F AH
Sbjct: 387 T-LRGHTGPV--NSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAH 433
>CGD|CAL0005343 [details] [associations]
symbol:DOA1 species:5476 "Candida albicans" [GO:0004620
"phospholipase activity" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005343 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004620 GO:GO:0006511
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044182 GO:GO:1900429
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 RefSeq:XP_723325.1 RefSeq:XP_723515.1
ProteinModelPortal:Q5APD6 STRING:Q5APD6 GeneID:3634871
GeneID:3635107 KEGG:cal:CaO19.12292 KEGG:cal:CaO19.4829
Uniprot:Q5APD6
Length = 761
Score = 197 (74.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 52/161 (32%), Positives = 81/161 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GHE +V + G+ +Y L+C D+TIR W H +K + H +R + +
Sbjct: 132 ILSGHESSVWDCQVLGEDHY-LTCSADKTIRFW--HGKSEVKQFVGHSDVIRKLLILEGG 188
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+ +SC D I WD+ TG+ ++ F GHES V + + VS G D+++R WD
Sbjct: 189 EQFLSCSNDGTIKLWDLQTGKNLQTFYGHESFVYDLALIA-NGKFVSTGEDRTVRIWDLA 247
Query: 133 SHSTEPIQIIDSFQDSVMSV-CLTKTEI-IGGSVDGTVRTF 171
+ + +Q+I SV V L + +GGS D VR F
Sbjct: 248 TGNV--LQVITLPCISVWCVTALPNGDFAVGGS-DNLVRVF 285
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 63/257 (24%), Positives = 110/257 (42%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK-TYKSHGREVRDVHVT 69
++ L GHE V G +S +D T R+W+ H + T H ++
Sbjct: 6 SSTLLGHEQDVKDVATTEYGGL-VSVSRDGTTRIWSDIYTTHSEATIVFHSPTNSFINSV 64
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
A + LI+ GG + Y G + GHE V ++ ++ ++S+ +D + W
Sbjct: 65 ACINGLIASGGQDTMIYLSDEHGEDKYQLIGHEGNVCSMSYSH--GQLISSSWDCTAIVW 122
Query: 130 DCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP-- 186
+ + P I+ + SV L + + S D T+R + + E+ +G
Sbjct: 123 NLKEFV--PKYILSGHESSVWDCQVLGEDHYLTCSADKTIRFWHGK--SEVKQFVGHSDV 178
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
+ + + G L+ D T++L D TG+ LQ + GH +SF D L + V+ G
Sbjct: 179 IRKLLILEGGEQFLSCSNDGTIKLWDLQTGKNLQTFYGH--ESFVYDLALIANGKFVSTG 236
Query: 247 SEDGYIYFWDLVDASVV 263
ED + WDL +V+
Sbjct: 237 -EDRTVRIWDLATGNVL 252
Score = 149 (57.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 51/190 (26%), Positives = 80/190 (42%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
++E GH + G LSC D TI+LW+ G +++T+ H V D+
Sbjct: 166 KSEVKQFVGHSDVIRKLLILEGGEQFLSCSNDGTIKLWDLQTGKNLQTFYGHESFVYDLA 225
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+ A N K +S G DR + WD++TG V++ V V V G D +R
Sbjct: 226 LIA-NGKFVSTGEDRTVRIWDLATGNVLQVITLPCISVWCVTALPNGDFAVG-GSDNLVR 283
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPV 187
+ P + + F+++V S + I S+D +T DI LS Q
Sbjct: 284 VFTAHPEKVAPEEELLKFKEAVQS-----SSIAEQSLDDLKKT-DIPGYEALSQPGKQEG 337
Query: 188 NCISMSNDGN 197
+ I + N N
Sbjct: 338 STIMVKNPDN 347
Score = 116 (45.9 bits), Expect = 0.00081, P = 0.00081
Identities = 55/222 (24%), Positives = 98/222 (44%)
Query: 35 SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRV 94
S G+D I L + H Y+ G E ++ + +LIS D W++
Sbjct: 73 SGGQDTMIYLSDEHGE---DKYQLIGHEGNVCSMSYSHGQLISSSWDCTAIVWNLK--EF 127
Query: 95 IRKF--RGHESEV-NAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMS 151
+ K+ GHES V + E + SA D+++R W H ++ D +
Sbjct: 128 VPKYILSGHESSVWDCQVLGEDHYLTCSA--DKTIRFW----HGKSEVKQFVGHSDVIRK 181
Query: 152 VCLTK--TEIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDST 207
+ + + + + S DGT++ +D++ G+ L G V +++ +G + ++ D T
Sbjct: 182 LLILEGGEQFLSCSNDGTIKLWDLQTGKNLQTFYGHESFVYDLALIANGKFV-STGEDRT 240
Query: 208 LRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249
+R+ D +TG +LQ C S L N D V GGS++
Sbjct: 241 VRIWDLATGNVLQVITLP-CISVWCVTALPNGDFAV-GGSDN 280
Score = 40 (19.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 179 LSDDLGQPVNCIS-MSNDGNCILASCLDSTLRL 210
L +++G I M N GN I+AS ++ RL
Sbjct: 683 LKNNMGSAKPVIEFMDNLGNQIVASSSEAAYRL 715
>UNIPROTKB|Q5APD6 [details] [associations]
symbol:DOA1 "Putative uncharacterized protein DOA1"
species:237561 "Candida albicans SC5314" [GO:0004620 "phospholipase
activity" evidence=IMP] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005343 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004620 GO:GO:0006511
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044182 GO:GO:1900429
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 RefSeq:XP_723325.1 RefSeq:XP_723515.1
ProteinModelPortal:Q5APD6 STRING:Q5APD6 GeneID:3634871
GeneID:3635107 KEGG:cal:CaO19.12292 KEGG:cal:CaO19.4829
Uniprot:Q5APD6
Length = 761
Score = 197 (74.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 52/161 (32%), Positives = 81/161 (50%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
+L GHE +V + G+ +Y L+C D+TIR W H +K + H +R + +
Sbjct: 132 ILSGHESSVWDCQVLGEDHY-LTCSADKTIRFW--HGKSEVKQFVGHSDVIRKLLILEGG 188
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132
+ +SC D I WD+ TG+ ++ F GHES V + + VS G D+++R WD
Sbjct: 189 EQFLSCSNDGTIKLWDLQTGKNLQTFYGHESFVYDLALIA-NGKFVSTGEDRTVRIWDLA 247
Query: 133 SHSTEPIQIIDSFQDSVMSV-CLTKTEI-IGGSVDGTVRTF 171
+ + +Q+I SV V L + +GGS D VR F
Sbjct: 248 TGNV--LQVITLPCISVWCVTALPNGDFAVGGS-DNLVRVF 285
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 63/257 (24%), Positives = 110/257 (42%)
Query: 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK-TYKSHGREVRDVHVT 69
++ L GHE V G +S +D T R+W+ H + T H ++
Sbjct: 6 SSTLLGHEQDVKDVATTEYGGL-VSVSRDGTTRIWSDIYTTHSEATIVFHSPTNSFINSV 64
Query: 70 ADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129
A + LI+ GG + Y G + GHE V ++ ++ ++S+ +D + W
Sbjct: 65 ACINGLIASGGQDTMIYLSDEHGEDKYQLIGHEGNVCSMSYSH--GQLISSSWDCTAIVW 122
Query: 130 DCRSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQP-- 186
+ + P I+ + SV L + + S D T+R + + E+ +G
Sbjct: 123 NLKEFV--PKYILSGHESSVWDCQVLGEDHYLTCSADKTIRFWHGK--SEVKQFVGHSDV 178
Query: 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246
+ + + G L+ D T++L D TG+ LQ + GH +SF D L + V+ G
Sbjct: 179 IRKLLILEGGEQFLSCSNDGTIKLWDLQTGKNLQTFYGH--ESFVYDLALIANGKFVSTG 236
Query: 247 SEDGYIYFWDLVDASVV 263
ED + WDL +V+
Sbjct: 237 -EDRTVRIWDLATGNVL 252
Score = 149 (57.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 51/190 (26%), Positives = 80/190 (42%)
Query: 8 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH 67
++E GH + G LSC D TI+LW+ G +++T+ H V D+
Sbjct: 166 KSEVKQFVGHSDVIRKLLILEGGEQFLSCSNDGTIKLWDLQTGKNLQTFYGHESFVYDLA 225
Query: 68 VTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127
+ A N K +S G DR + WD++TG V++ V V V G D +R
Sbjct: 226 LIA-NGKFVSTGEDRTVRIWDLATGNVLQVITLPCISVWCVTALPNGDFAVG-GSDNLVR 283
Query: 128 AWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPV 187
+ P + + F+++V S + I S+D +T DI LS Q
Sbjct: 284 VFTAHPEKVAPEEELLKFKEAVQS-----SSIAEQSLDDLKKT-DIPGYEALSQPGKQEG 337
Query: 188 NCISMSNDGN 197
+ I + N N
Sbjct: 338 STIMVKNPDN 347
Score = 116 (45.9 bits), Expect = 0.00081, P = 0.00081
Identities = 55/222 (24%), Positives = 98/222 (44%)
Query: 35 SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRV 94
S G+D I L + H Y+ G E ++ + +LIS D W++
Sbjct: 73 SGGQDTMIYLSDEHGE---DKYQLIGHEGNVCSMSYSHGQLISSSWDCTAIVWNLK--EF 127
Query: 95 IRKF--RGHESEV-NAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMS 151
+ K+ GHES V + E + SA D+++R W H ++ D +
Sbjct: 128 VPKYILSGHESSVWDCQVLGEDHYLTCSA--DKTIRFW----HGKSEVKQFVGHSDVIRK 181
Query: 152 VCLTK--TEIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDGNCILASCLDST 207
+ + + + + S DGT++ +D++ G+ L G V +++ +G + ++ D T
Sbjct: 182 LLILEGGEQFLSCSNDGTIKLWDLQTGKNLQTFYGHESFVYDLALIANGKFV-STGEDRT 240
Query: 208 LRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249
+R+ D +TG +LQ C S L N D V GGS++
Sbjct: 241 VRIWDLATGNVLQVITLP-CISVWCVTALPNGDFAV-GGSDN 280
Score = 40 (19.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 179 LSDDLGQPVNCIS-MSNDGNCILASCLDSTLRL 210
L +++G I M N GN I+AS ++ RL
Sbjct: 683 LKNNMGSAKPVIEFMDNLGNQIVASSSEAAYRL 715
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 195 (73.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 47/170 (27%), Positives = 88/170 (51%)
Query: 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72
V++ H AV A F+ DG SCG D+T++++ G + K+H EV ++D+
Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD 669
Query: 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF-NEYSSVVVSAGYDQS-LRAWD 130
S + +C D+++ WD TG+++ + H +VN F N+ + ++++ G + S L+ WD
Sbjct: 670 SYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWD 729
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKT-EIIGG-SVDGTVRTFDIRVGRE 178
+ E + +SV + E++ S DGT++ +D+R E
Sbjct: 730 L--NQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANE 777
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 67/290 (23%), Positives = 125/290 (43%)
Query: 5 DLPRTEA-NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLW-----NPHRGIHIKTYKS 58
DL + E N + GH +V RF+ D SC D T++LW N + I++K +
Sbjct: 729 DLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKRFFL 788
Query: 59 HGREV-RDVHV-------TADNSKLISCGGDRQIFYWDVSTGRVIRKFR-GHESEVNAVK 109
+ DV V +AD ++I ++ + D+ T ++ + GH S +
Sbjct: 789 SSEDPPEDVEVIVKCCSWSADGDRIIVAAKNK-VLLLDIHTSGLLTEIHTGHHSTIQYCD 847
Query: 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIID--SFQDSVMSVCLTK--TEIIGGSVD 165
F+ Y + V A + W+ S +++ D V V + + + S D
Sbjct: 848 FSPYDHLAVIALSQYCVELWNIDSR----VKVADCRGHLSWVHGVMFSPDGSSFLTASDD 903
Query: 166 GTVRTFDIR-VGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG 224
T+R ++ R V + + L Q ++ + N+ +LA L+L+ TG++ +Y
Sbjct: 904 QTIRVWETRKVCKNSAIVLKQEIDVVFQENE-MMVLAVDNIRGLQLIAGKTGQI--DY-- 958
Query: 225 HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVK 274
+ ++ + CCL+ +V G E+G I +L + V + H V+
Sbjct: 959 -LPEAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVR 1007
Score = 146 (56.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 48/206 (23%), Positives = 90/206 (43%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH+ AV +F DG +S +D I++WN ++ ++H V+D + D S+L
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYV-FLQAHQETVKDFRLLRD-SRL 1058
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS 135
+S D + W+V TGR+ R F H+ V + + ++ S D++ + W S
Sbjct: 1059 LSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPS 1118
Query: 136 TEPIQIIDSFQDSVMSVCLTKTEII--GGSVDGTVRTFDIRVGRELSDDLGQPVNCIS-M 192
P+ + V + I+ G +G +R +++ G+ L L P++
Sbjct: 1119 --PLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLH--LCAPISIEEGT 1174
Query: 193 SNDGNCILASCLDSTLRLLDRSTGEL 218
+ G + C ++L + G L
Sbjct: 1175 ATHGGWVTDVCFSPDRKMLVSAGGYL 1200
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 41/184 (22%), Positives = 85/184 (46%)
Query: 88 DVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD 147
++ RV GH+ V ++F ++S+ D ++ W+ + TE + + Q+
Sbjct: 989 ELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ---TEEYVFLQAHQE 1045
Query: 148 SVMSVCLTK-TEIIGGSVDGTVRTFDI---RVGRELSDDLGQPVNCISMSNDGNCILASC 203
+V L + + ++ S DGTV+ +++ R+ R+ + G ++C ++S+D ++
Sbjct: 1046 TVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSC-AISSDATKFSSTS 1104
Query: 204 LDSTLRLLDRSTGELLQEYKGHI----CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259
D T ++ L E KGH C +F D L + G ++G I W++ D
Sbjct: 1105 ADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGIL------LATGDDNGEIRIWNVSD 1158
Query: 260 ASVV 263
++
Sbjct: 1159 GQLL 1162
Score = 130 (50.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 141 IIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSDDLGQP--VNCISMSNDG 196
++ D+V C ++ I D T++ F G +L D V C + S+D
Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD 669
Query: 197 NCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC-LTNSDAHV--TGGSEDGYIY 253
+ I +D +++ D TG+L+ Y+ H S + +CC TN H+ GS D ++
Sbjct: 670 SYIATCSVDKKVKIWDSGTGKLVHTYEEH---SEQVNCCHFTNKSNHLLLATGSNDSFLK 726
Query: 254 FWDL 257
WDL
Sbjct: 727 LWDL 730
Score = 128 (50.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 55/261 (21%), Positives = 108/261 (41%)
Query: 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL 75
GH + F+ + + + LWN + + + H V V + D S
Sbjct: 838 GHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSF 897
Query: 76 ISCGGDRQIFYWDVSTGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH 134
++ D+ I W+ T +V + + E++ V F E +V++ ++R +
Sbjct: 898 LTASDDQTIRVWE--TRKVCKNSAIVLKQEIDVV-FQENEMMVLAV---DNIRGLQLIAG 951
Query: 135 STEPIQIIDSFQDSVMSVCLTK-TEIIG-GSVDGTVRTFDIRVGRELSDDLG--QPVNCI 190
T I + Q V CL+ E + G +G ++ ++ R S +G + V I
Sbjct: 952 KTGQIDYLPEAQ--VSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHI 1009
Query: 191 SMSNDGNCILASCLDSTLRLLDRSTGE--LLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248
+ DG +++S DS +++ + T E LQ ++ + K F+ L D+ + S
Sbjct: 1010 QFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQETV-KDFR----LLR-DSRLLSWSF 1063
Query: 249 DGYIYFWDLVDASVVAKFKAH 269
DG + W+++ + F H
Sbjct: 1064 DGTVKVWNVITGRIERDFTCH 1084
Score = 50 (22.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 14/76 (18%), Positives = 33/76 (43%)
Query: 199 ILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV 258
+L+ D T+++ + TG + +++ H + C +++ + S D W
Sbjct: 1058 LLSWSFDGTVKVWNVITGRIERDFTCH--QGTVLSCAISSDATKFSSTSADKTAKIWSFE 1115
Query: 259 DASVVAKFKAHSLVVK 274
S + + K H+ V+
Sbjct: 1116 LPSPLHELKGHNSCVR 1131
>FB|FBgn0024314 [details] [associations]
symbol:Plap "Phospholipase A2 activator protein" species:7227
"Drosophila melanogaster" [GO:0045169 "fusome" evidence=NAS]
[GO:0016005 "phospholipase A2 activator activity" evidence=ISS;NAS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR015155 InterPro:IPR013535 Pfam:PF09070
Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396 FlyBase:FBgn0024314
EMBL:AF106852 ProteinModelPortal:Q9GUB1 SMR:Q9GUB1 STRING:Q9GUB1
PRIDE:Q9GUB1 InParanoid:Q9GUB1 ArrayExpress:Q9GUB1 Bgee:Q9GUB1
Uniprot:Q9GUB1
Length = 787
Score = 200 (75.5 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 58/171 (33%), Positives = 84/171 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L+GHE AV A + ++ G DR I WN +G ++ K H VR V + D +
Sbjct: 148 LEGHEAAVWAVATLKEQRKYVTGGADRNIYYWNA-KGEKLRLLKGHTDCVRGV-MGLDAN 205
Query: 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY--SSVVVSAGYDQSLRAWDC 131
L+SCG D + +W+ G +R+ GH + + ++ NE VVVS G D +LR W+
Sbjct: 206 TLLSCGNDAVLRFWN-EDGECVREMNGHSNYIYSMARNEALGDQVVVSCGEDSTLRMWNV 264
Query: 132 RSHSTEPIQIIDSFQDSVMSV-CLTKTEIIGGSVDGTVRTFDIRVGRELSD 181
+ II SV SV CL +I+ G DG VR F R+ S+
Sbjct: 265 ITGDELGAPIIHP-GISVWSVTCLQNGDIVTGCSDGVVRVFSHVPARQASE 314
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWN-PHRG-IHIKTYKSHGREVRDVHVTAD 71
LKGHE V A + +S D+T R+W G + + H V V +
Sbjct: 104 LKGHESTVCALSAGLEPRSLISGSWDKTARVWTISEAGDVSFVALEGHEAAVWAVATLKE 163
Query: 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDC 131
K ++ G DR I+YW+ G +R +GH V V + ++ ++S G D LR W+
Sbjct: 164 QRKYVTGGADRNIYYWNAK-GEKLRLLKGHTDCVRGVMGLD-ANTLLSCGNDAVLRFWN- 220
Query: 132 RSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSV------DGTVRTFDIRVGRELSDDLGQ 185
E ++ ++ + + S + + E +G V D T+R +++ G EL +
Sbjct: 221 --EDGECVREMNGHSNYIYS--MARNEALGDQVVVSCGEDSTLRMWNVITGDELGAPIIH 276
Query: 186 P---VNCISMSNDGNCILASCLDSTLRL 210
P V ++ +G+ I+ C D +R+
Sbjct: 277 PGISVWSVTCLQNGD-IVTGCSDGVVRV 303
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 46/231 (19%), Positives = 93/231 (40%)
Query: 34 LSCGKDRTIRLWNPHRGIHIK--TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST 91
LS +D++ ++W PH +++ T + H + + + + D I +
Sbjct: 38 LSGSRDKSTKVWKPHGNEYLESLTLQDHKNFISYICFLESERWICTASNDATICIYKQDG 97
Query: 92 GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMS 151
+ +GHES V A+ ++S +D++ R W ++ + +V +
Sbjct: 98 FVPLLTLKGHESTVCALSAGLEPRSLISGSWDKTARVWTISEAGDVSFVALEGHEAAVWA 157
Query: 152 VCLTKTE--IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCIS--MSNDGNCILASCLDST 207
V K + + G D + ++ + G +L G +C+ M D N +L+ D+
Sbjct: 158 VATLKEQRKYVTGGADRNIYYWNAK-GEKLRLLKGH-TDCVRGVMGLDANTLLSCGNDAV 215
Query: 208 LRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV 258
LR + GE ++E GH + D V ED + W+++
Sbjct: 216 LRFWNED-GECVREMNGHSNYIYSMARNEALGDQVVVSCGEDSTLRMWNVI 265
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 194 (73.4 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 56/220 (25%), Positives = 109/220 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH V + DG + LS D+T+RLW+ ++G+ + + SH ++V V +ADN
Sbjct: 65 LTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR 124
Query: 74 KLISCGGDRQIFYWD-VSTGRVIRKFRGHESEVNAVKFNEYSS--VVVSAGYDQSLRAWD 130
+++S D+ I W+ ++ + H V+ V+F+ + V+VSAG+D+ ++ W+
Sbjct: 125 QIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWN 184
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPV-NC 189
+ + I + + ++V + G DG +D+ G+ L G V N
Sbjct: 185 LGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDVINA 244
Query: 190 ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+S S + + A+ + S++++ D + ++E K I S
Sbjct: 245 MSFSPNRYWLCAA-VGSSIKIWDLEDKKEIEELKPEIASS 283
Score = 165 (63.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/229 (24%), Positives = 103/229 (44%)
Query: 14 LKGHEGAV--LAARFNGDGNYCLSCGKDRTIRLWNPHR---------GIHIKTYKSHGRE 62
L+GH G V +A D LS +D+TI +W+ G +++ H
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHF 71
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
V DV +++D +S D+ + WD++ G R+F H +V +V F+ + +VS
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSR 131
Query: 123 DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDIRVGRE 178
D+S++ W+ + I D D V +V + + I+ D V+ +++ R
Sbjct: 132 DKSIKLWNTLAQCKYTITD-DCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRL 190
Query: 179 LSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
++ +G VN +++S DG+ + D L D + G+ L G+
Sbjct: 191 KTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Score = 131 (51.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 47/203 (23%), Positives = 88/203 (43%)
Query: 71 DNSKLISCGGDRQIFYWDVST---------GRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
D + ++S D+ I WDV + GR +R GH V+ V + +S
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 122 YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTFDI--RVGR 177
+D++LR WD + Q I +D V+SV + +I+ GS D +++ ++ +
Sbjct: 89 WDKTLRLWDL-NQGVSTRQFISHTKD-VLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKY 146
Query: 178 ELSDDLGQP-VNCI--SMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDC 234
++DD V+ + S SN I+++ D +++ + L + GH +
Sbjct: 147 TITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHT--GYVNTV 204
Query: 235 CLTNSDAHVTGGSEDGYIYFWDL 257
++ + G +DG WDL
Sbjct: 205 TVSPDGSLCASGGKDGQAMLWDL 227
Score = 129 (50.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 46/210 (21%), Positives = 87/210 (41%)
Query: 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTADNSK- 74
H VL+ F+ D +S +D++I+LWN + T H V V + N
Sbjct: 110 HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDP 169
Query: 75 -LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S G D+ + W++ R+ GH VN V + S+ S G D WD
Sbjct: 170 VIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDL-- 227
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEI-IGGSVDGTVRTFDIRVGRELSD----------D 182
+ + + + D + ++ + + +V +++ +D+ +E+ +
Sbjct: 228 NEGKHLYTLPG-NDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSS 286
Query: 183 LGQPVNCISM--SNDGNCILASCLDSTLRL 210
G CIS+ S DG + A D+ +R+
Sbjct: 287 RGSSPQCISLAWSQDGQTLFAGYTDNIIRV 316
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 194 (73.4 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 56/220 (25%), Positives = 109/220 (49%)
Query: 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNS 73
L GH V + DG + LS D+T+RLW+ ++G+ + + SH ++V V +ADN
Sbjct: 65 LTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR 124
Query: 74 KLISCGGDRQIFYWD-VSTGRVIRKFRGHESEVNAVKFNEYSS--VVVSAGYDQSLRAWD 130
+++S D+ I W+ ++ + H V+ V+F+ + V+VSAG+D+ ++ W+
Sbjct: 125 QIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWN 184
Query: 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPV-NC 189
+ + I + + ++V + G DG +D+ G+ L G V N
Sbjct: 185 LGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDVINA 244
Query: 190 ISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229
+S S + + A+ + S++++ D + ++E K I S
Sbjct: 245 MSFSPNRYWLCAA-VGSSIKIWDLEDKKEIEELKPEIASS 283
Score = 165 (63.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/229 (24%), Positives = 103/229 (44%)
Query: 14 LKGHEGAV--LAARFNGDGNYCLSCGKDRTIRLWNPHR---------GIHIKTYKSHGRE 62
L+GH G V +A D LS +D+TI +W+ G +++ H
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHF 71
Query: 63 VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY 122
V DV +++D +S D+ + WD++ G R+F H +V +V F+ + +VS
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSR 131
Query: 123 DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE----IIGGSVDGTVRTFDIRVGRE 178
D+S++ W+ + I D D V +V + + I+ D V+ +++ R
Sbjct: 132 DKSIKLWNTLAQCKYTITD-DCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRL 190
Query: 179 LSDDLGQP--VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225
++ +G VN +++S DG+ + D L D + G+ L G+
Sbjct: 191 KTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Score = 131 (51.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 47/203 (23%), Positives = 88/203 (43%)
Query: 71 DNSKLISCGGDRQIFYWDVST---------GRVIRKFRGHESEVNAVKFNEYSSVVVSAG 121
D + ++S D+ I WDV + GR +R GH V+ V + +S
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 122 YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTFDI--RVGR 177
+D++LR WD + Q I +D V+SV + +I+ GS D +++ ++ +
Sbjct: 89 WDKTLRLWDL-NQGVSTRQFISHTKD-VLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKY 146
Query: 178 ELSDDLGQP-VNCI--SMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDC 234
++DD V+ + S SN I+++ D +++ + L + GH +
Sbjct: 147 TITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHT--GYVNTV 204
Query: 235 CLTNSDAHVTGGSEDGYIYFWDL 257
++ + G +DG WDL
Sbjct: 205 TVSPDGSLCASGGKDGQAMLWDL 227
Score = 129 (50.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 46/210 (21%), Positives = 87/210 (41%)
Query: 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTADNSK- 74
H VL+ F+ D +S +D++I+LWN + T H V V + N
Sbjct: 110 HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDP 169
Query: 75 -LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS 133
++S G D+ + W++ R+ GH VN V + S+ S G D WD
Sbjct: 170 VIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDL-- 227
Query: 134 HSTEPIQIIDSFQDSVMSVCLTKTEI-IGGSVDGTVRTFDIRVGRELSD----------D 182
+ + + + D + ++ + + +V +++ +D+ +E+ +
Sbjct: 228 NEGKHLYTLPG-NDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSS 286
Query: 183 LGQPVNCISM--SNDGNCILASCLDSTLRL 210
G CIS+ S DG + A D+ +R+
Sbjct: 287 RGSSPQCISLAWSQDGQTLFAGYTDNIIRV 316
WARNING: HSPs involving 1083 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 277 277 0.00080 115 3 11 22 0.48 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1333
No. of states in DFA: 616 (65 KB)
Total size of DFA: 216 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.87u 0.11s 24.98t Elapsed: 00:00:01
Total cpu time: 24.97u 0.11s 25.08t Elapsed: 00:00:01
Start: Fri May 10 20:07:31 2013 End: Fri May 10 20:07:32 2013
WARNINGS ISSUED: 2