Query 023772
Match_columns 277
No_of_seqs 193 out of 1565
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 12:33:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023772.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023772hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 7.2E-49 2.4E-53 319.8 38.4 263 10-275 5-275 (304)
2 1vyh_C Platelet-activating fac 100.0 9.8E-48 3.4E-52 325.6 35.9 262 11-276 101-386 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 6.8E-46 2.3E-50 306.8 38.5 265 9-276 46-318 (340)
4 4ery_A WD repeat-containing pr 100.0 1.2E-45 4.1E-50 301.6 38.1 264 11-276 16-285 (312)
5 2pbi_B Guanine nucleotide-bind 100.0 2.6E-45 8.9E-50 305.0 38.2 266 9-276 55-332 (354)
6 3ow8_A WD repeat-containing pr 100.0 1.2E-45 4E-50 303.0 33.4 261 12-276 26-296 (321)
7 3frx_A Guanine nucleotide-bind 100.0 1.9E-44 6.3E-49 295.7 35.4 247 11-260 10-318 (319)
8 1vyh_C Platelet-activating fac 100.0 1.1E-44 3.8E-49 306.9 32.8 244 11-258 143-410 (410)
9 3iz6_a 40S ribosomal protein R 100.0 6.4E-45 2.2E-49 305.4 29.2 264 11-276 59-350 (380)
10 4gqb_B Methylosome protein 50; 100.0 5.1E-44 1.7E-48 295.8 33.6 245 14-262 78-334 (344)
11 2pm7_B Protein transport prote 100.0 1E-43 3.5E-48 288.4 33.1 245 12-258 3-284 (297)
12 3ow8_A WD repeat-containing pr 100.0 1.7E-43 5.9E-48 290.2 34.0 243 12-258 74-320 (321)
13 1erj_A Transcriptional repress 100.0 5.2E-43 1.8E-47 295.0 32.9 255 16-276 62-358 (393)
14 4gqb_B Methylosome protein 50; 100.0 3.4E-43 1.1E-47 290.9 31.1 256 14-276 26-305 (344)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.4E-42 8.1E-47 286.2 34.7 265 10-276 7-309 (345)
16 2xzm_R RACK1; ribosome, transl 100.0 2.4E-42 8.3E-47 285.8 34.4 251 10-264 13-290 (343)
17 1got_B GT-beta; complex (GTP-b 100.0 4.5E-42 1.5E-46 283.9 35.2 241 11-256 90-340 (340)
18 4g56_B MGC81050 protein; prote 100.0 2.3E-42 7.9E-47 287.5 31.6 247 12-262 88-346 (357)
19 4g56_B MGC81050 protein; prote 100.0 2.4E-42 8.1E-47 287.4 31.0 257 14-276 38-317 (357)
20 2ynn_A Coatomer subunit beta'; 100.0 2.1E-41 7.1E-46 275.7 35.3 247 10-260 47-303 (304)
21 3bg1_A Protein SEC13 homolog; 100.0 5.7E-43 2E-47 286.5 25.9 259 11-271 6-308 (316)
22 1nr0_A Actin interacting prote 100.0 1.6E-41 5.6E-46 301.1 35.3 261 9-275 50-372 (611)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-41 4.3E-46 281.8 32.4 252 14-267 57-343 (345)
24 2hes_X YDR267CP; beta-propelle 100.0 4.9E-41 1.7E-45 276.6 35.3 261 10-275 6-300 (330)
25 1nr0_A Actin interacting prote 100.0 2.3E-41 7.7E-46 300.2 35.6 263 11-276 140-542 (611)
26 2hes_X YDR267CP; beta-propelle 100.0 1.9E-41 6.6E-46 279.0 32.7 242 16-259 56-328 (330)
27 2pbi_B Guanine nucleotide-bind 100.0 9.3E-41 3.2E-45 277.5 33.9 242 11-256 99-354 (354)
28 4aow_A Guanine nucleotide-bind 100.0 8E-40 2.8E-44 269.3 36.9 252 11-267 31-294 (340)
29 3jrp_A Fusion protein of prote 100.0 1.3E-40 4.5E-45 277.7 32.4 250 11-260 4-288 (379)
30 2xzm_R RACK1; ribosome, transl 100.0 2.7E-40 9.3E-45 273.6 33.4 244 11-261 69-342 (343)
31 1yfq_A Cell cycle arrest prote 100.0 2.1E-40 7.1E-45 273.2 31.8 259 13-276 6-300 (342)
32 1erj_A Transcriptional repress 100.0 4.8E-40 1.6E-44 277.0 33.8 239 19-260 124-390 (393)
33 3zwl_B Eukaryotic translation 100.0 3.1E-39 1.1E-43 268.2 37.7 262 11-276 25-321 (369)
34 2ymu_A WD-40 repeat protein; u 100.0 1.4E-39 4.7E-44 286.5 36.2 261 9-276 7-309 (577)
35 3dm0_A Maltose-binding peripla 100.0 4.8E-40 1.7E-44 295.7 33.4 254 12-269 376-642 (694)
36 3odt_A Protein DOA1; ubiquitin 100.0 2.6E-39 8.8E-44 263.2 34.6 257 9-276 9-272 (313)
37 4ery_A WD repeat-containing pr 100.0 2.8E-39 9.7E-44 263.8 34.8 245 11-258 58-311 (312)
38 3f3f_A Nucleoporin SEH1; struc 100.0 1.6E-39 5.4E-44 267.5 33.3 255 11-267 4-345 (351)
39 1sq9_A Antiviral protein SKI8; 100.0 7.9E-40 2.7E-44 275.2 31.9 254 10-267 8-330 (397)
40 3iz6_a 40S ribosomal protein R 100.0 5.7E-41 1.9E-45 281.4 24.8 249 10-261 100-377 (380)
41 2ymu_A WD-40 repeat protein; u 100.0 4E-39 1.4E-43 283.5 37.3 258 9-276 294-555 (577)
42 3ei3_B DNA damage-binding prot 100.0 2.8E-39 9.5E-44 271.0 33.2 259 11-275 66-357 (383)
43 3mkq_A Coatomer beta'-subunit; 100.0 6.4E-39 2.2E-43 292.7 37.0 263 11-276 6-276 (814)
44 3v7d_B Cell division control p 100.0 1.4E-38 4.9E-43 273.2 36.8 250 11-267 114-389 (464)
45 3i2n_A WD repeat-containing pr 100.0 1.7E-39 5.7E-44 269.1 29.5 273 1-276 1-327 (357)
46 3mmy_A MRNA export factor; mRN 100.0 1E-38 3.5E-43 265.0 33.9 266 7-276 28-321 (368)
47 1k8k_C P40, ARP2/3 complex 41 100.0 8.2E-39 2.8E-43 266.5 32.6 244 13-259 3-274 (372)
48 3dw8_B Serine/threonine-protei 100.0 2.4E-39 8.3E-44 276.2 29.4 250 16-269 26-382 (447)
49 3k26_A Polycomb protein EED; W 100.0 1.1E-39 3.7E-44 270.9 25.9 243 17-259 68-366 (366)
50 3gre_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 275.0 27.4 254 12-269 56-369 (437)
51 4gga_A P55CDC, cell division c 100.0 7.1E-38 2.4E-42 265.9 35.2 253 14-270 143-406 (420)
52 4e54_B DNA damage-binding prot 100.0 1.1E-38 3.9E-43 272.0 30.4 260 12-274 113-403 (435)
53 3dm0_A Maltose-binding peripla 100.0 3.9E-38 1.3E-42 283.3 35.0 246 11-259 423-693 (694)
54 3vl1_A 26S proteasome regulato 100.0 6.3E-38 2.2E-42 265.5 32.7 242 14-260 94-366 (420)
55 1gxr_A ESG1, transducin-like e 100.0 2.4E-37 8.3E-42 253.9 33.5 255 13-274 46-310 (337)
56 1r5m_A SIR4-interacting protei 100.0 2E-37 6.9E-42 262.0 33.9 258 15-276 42-400 (425)
57 4aez_A CDC20, WD repeat-contai 100.0 1.3E-37 4.5E-42 262.6 32.6 246 16-267 132-388 (401)
58 3dwl_C Actin-related protein 2 100.0 1.6E-39 5.4E-44 271.7 20.6 243 13-258 6-280 (377)
59 1p22_A F-BOX/WD-repeat protein 100.0 2.6E-37 8.9E-42 263.5 33.9 250 15-276 130-391 (435)
60 3k26_A Polycomb protein EED; W 100.0 2.2E-37 7.6E-42 257.0 31.1 259 12-276 12-341 (366)
61 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7.4E-37 2.5E-41 261.3 34.6 253 11-276 111-368 (445)
62 1gxr_A ESG1, transducin-like e 100.0 3E-36 1E-40 247.4 36.5 237 16-258 95-336 (337)
63 3jro_A Fusion protein of prote 100.0 3.9E-38 1.3E-42 285.5 27.2 248 12-261 3-287 (753)
64 4a11_B DNA excision repair pro 100.0 1.2E-36 4.1E-41 256.1 34.3 255 10-269 35-375 (408)
65 3ei3_B DNA damage-binding prot 100.0 5.7E-37 1.9E-41 257.0 31.0 239 15-259 115-382 (383)
66 3i2n_A WD repeat-containing pr 100.0 2.8E-37 9.5E-42 255.7 28.7 244 14-262 61-356 (357)
67 2pm9_A Protein WEB1, protein t 100.0 3.3E-37 1.1E-41 260.6 29.1 247 15-265 64-343 (416)
68 1r5m_A SIR4-interacting protei 100.0 1.9E-36 6.4E-41 256.0 33.5 239 17-258 107-424 (425)
69 1sq9_A Antiviral protein SKI8; 100.0 2.4E-37 8.2E-42 260.0 27.8 247 10-261 54-397 (397)
70 3v7d_B Cell division control p 100.0 3.5E-36 1.2E-40 258.3 35.5 256 10-276 154-439 (464)
71 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.3E-36 1.8E-40 256.1 36.3 254 11-276 152-413 (445)
72 3vl1_A 26S proteasome regulato 100.0 3.4E-38 1.2E-42 267.2 22.6 252 20-276 58-341 (420)
73 3zwl_B Eukaryotic translation 100.0 2.9E-36 1E-40 250.3 32.6 255 10-268 66-355 (369)
74 4ggc_A P55CDC, cell division c 100.0 1.1E-35 3.9E-40 242.3 35.5 244 14-261 63-317 (318)
75 4aow_A Guanine nucleotide-bind 100.0 8.5E-36 2.9E-40 245.3 33.9 248 11-261 79-339 (340)
76 3sfz_A APAF-1, apoptotic pepti 100.0 2.8E-36 9.5E-41 286.7 35.5 261 11-276 608-888 (1249)
77 2pm9_A Protein WEB1, protein t 100.0 6.4E-38 2.2E-42 265.0 20.6 256 17-275 11-310 (416)
78 1k8k_C P40, ARP2/3 complex 41 100.0 2.5E-36 8.5E-41 251.4 29.2 250 10-262 44-364 (372)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-36 3.7E-41 257.1 27.3 249 11-263 74-346 (402)
80 1pgu_A Actin interacting prote 100.0 6.7E-36 2.3E-40 264.4 33.1 262 9-276 54-345 (615)
81 2j04_B YDR362CP, TAU91; beta p 100.0 6.8E-37 2.3E-41 265.5 25.9 241 13-258 202-516 (524)
82 2j04_B YDR362CP, TAU91; beta p 100.0 1.8E-37 6.1E-42 269.1 22.2 240 17-260 132-429 (524)
83 3odt_A Protein DOA1; ubiquitin 100.0 2.2E-35 7.6E-40 240.0 33.1 246 11-268 52-305 (313)
84 4e54_B DNA damage-binding prot 100.0 1E-36 3.5E-41 259.9 26.4 249 13-263 159-434 (435)
85 4aez_A CDC20, WD repeat-contai 100.0 1.1E-35 3.6E-40 251.0 32.2 253 16-276 89-355 (401)
86 1p22_A F-BOX/WD-repeat protein 100.0 7.2E-36 2.5E-40 254.6 30.3 243 11-267 166-422 (435)
87 4gga_A P55CDC, cell division c 100.0 5E-35 1.7E-39 248.4 35.3 248 21-276 108-370 (420)
88 2xyi_A Probable histone-bindin 100.0 6E-36 2.1E-40 254.8 29.0 249 12-262 122-413 (430)
89 1pgu_A Actin interacting prote 100.0 1.5E-35 5.2E-40 262.1 32.5 247 15-269 15-293 (615)
90 4h5i_A Guanine nucleotide-exch 100.0 1.6E-36 5.5E-41 253.0 24.4 242 13-260 68-344 (365)
91 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.5E-35 1.6E-39 250.7 32.3 254 18-274 4-358 (450)
92 4ggc_A P55CDC, cell division c 100.0 3.2E-34 1.1E-38 233.7 35.7 265 4-276 7-290 (318)
93 3dwl_C Actin-related protein 2 100.0 2.2E-36 7.4E-41 252.7 23.2 204 9-214 46-280 (377)
94 3sfz_A APAF-1, apoptotic pepti 100.0 8.9E-35 3.1E-39 276.4 34.9 263 10-275 649-1049(1249)
95 3frx_A Guanine nucleotide-bind 100.0 1.7E-34 6E-39 236.4 31.3 217 51-271 8-239 (319)
96 2pm7_B Protein transport prote 100.0 1.1E-34 3.9E-39 235.2 29.7 205 54-260 3-239 (297)
97 3gre_A Serine/threonine-protei 100.0 5.4E-35 1.8E-39 249.1 28.5 238 16-256 109-437 (437)
98 3vu4_A KMHSV2; beta-propeller 100.0 7.1E-34 2.4E-38 236.2 30.6 238 11-261 12-273 (355)
99 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-34 3.7E-39 244.8 25.3 251 20-274 36-317 (402)
100 1yfq_A Cell cycle arrest prote 100.0 4.2E-34 1.4E-38 235.5 28.3 237 11-256 49-321 (342)
101 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-33 6.1E-38 256.8 33.7 254 10-267 47-310 (814)
102 3dw8_B Serine/threonine-protei 100.0 1.7E-33 5.7E-38 240.1 29.1 244 11-258 74-445 (447)
103 3bg1_A Protein SEC13 homolog; 100.0 2.7E-34 9.3E-39 235.0 22.8 219 55-275 8-267 (316)
104 3lrv_A PRE-mRNA-splicing facto 100.0 2.2E-34 7.4E-39 238.1 22.0 229 25-261 43-294 (343)
105 2oaj_A Protein SNI1; WD40 repe 100.0 5.1E-33 1.7E-37 255.8 32.9 241 13-257 12-310 (902)
106 3mmy_A MRNA export factor; mRN 100.0 1.7E-33 5.8E-38 233.5 26.5 242 12-259 80-346 (368)
107 2oaj_A Protein SNI1; WD40 repe 100.0 9.5E-34 3.3E-38 260.6 24.0 253 13-268 430-792 (902)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.3E-32 1.1E-36 233.0 30.9 240 15-259 99-391 (450)
109 2j04_A TAU60, YPL007P, hypothe 100.0 6.3E-33 2.2E-37 237.1 24.5 232 16-258 13-296 (588)
110 4gq1_A NUP37; propeller, trans 100.0 2.4E-33 8.4E-38 236.0 20.6 239 17-258 88-388 (393)
111 2w18_A PALB2, fancn, partner a 100.0 9.2E-33 3.2E-37 222.8 22.3 210 17-257 110-355 (356)
112 1l0q_A Surface layer protein; 100.0 4.1E-31 1.4E-35 221.7 33.4 252 12-272 26-288 (391)
113 3jrp_A Fusion protein of prote 100.0 4.9E-32 1.7E-36 225.7 26.5 224 50-275 1-261 (379)
114 4h5i_A Guanine nucleotide-exch 100.0 4.9E-32 1.7E-36 225.9 26.2 198 16-215 131-343 (365)
115 3f3f_A Nucleoporin SEH1; struc 100.0 1E-31 3.5E-36 220.8 27.1 213 10-222 49-344 (351)
116 4a11_B DNA excision repair pro 100.0 3.9E-31 1.3E-35 222.4 30.1 239 15-259 96-405 (408)
117 2j04_A TAU60, YPL007P, hypothe 100.0 7.1E-33 2.4E-37 236.8 18.8 192 16-214 83-296 (588)
118 3lrv_A PRE-mRNA-splicing facto 100.0 9.1E-31 3.1E-35 216.4 26.8 229 19-258 77-332 (343)
119 3bws_A Protein LP49; two-domai 100.0 1.2E-29 4.1E-34 215.6 30.9 239 14-259 165-432 (433)
120 4gq1_A NUP37; propeller, trans 100.0 7.4E-31 2.5E-35 220.9 22.7 252 22-276 19-365 (393)
121 3jro_A Fusion protein of prote 100.0 1.9E-30 6.6E-35 235.1 23.2 220 53-274 2-258 (753)
122 3bws_A Protein LP49; two-domai 100.0 1.7E-29 5.8E-34 214.7 27.4 247 19-271 123-402 (433)
123 2xyi_A Probable histone-bindin 100.0 1.8E-29 6.2E-34 214.8 27.3 207 9-216 172-411 (430)
124 1l0q_A Surface layer protein; 100.0 2.1E-28 7.1E-33 205.3 31.4 235 31-273 3-247 (391)
125 3vu4_A KMHSV2; beta-propeller 100.0 1.9E-28 6.5E-33 203.4 27.7 237 17-262 57-339 (355)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.6E-26 5.5E-31 195.7 26.2 253 13-275 112-402 (415)
127 2w18_A PALB2, fancn, partner a 100.0 5.6E-26 1.9E-30 183.4 26.5 244 21-272 42-327 (356)
128 1nir_A Nitrite reductase; hemo 99.9 6.4E-25 2.2E-29 191.6 29.3 241 25-272 144-422 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.5E-24 2.2E-28 179.7 30.1 224 9-240 169-409 (415)
130 3vgz_A Uncharacterized protein 99.9 1E-22 3.4E-27 168.1 33.5 248 17-271 39-315 (353)
131 1ri6_A Putative isomerase YBHE 99.9 2.1E-23 7.2E-28 171.3 29.2 249 15-268 34-321 (343)
132 1nir_A Nitrite reductase; hemo 99.9 2.1E-23 7.2E-28 182.1 30.1 241 21-266 181-466 (543)
133 2ecf_A Dipeptidyl peptidase IV 99.9 2.8E-24 9.4E-29 194.5 24.2 250 18-273 36-381 (741)
134 3u4y_A Uncharacterized protein 99.9 7.1E-23 2.4E-27 167.8 30.2 247 13-262 35-307 (331)
135 1pby_B Quinohemoprotein amine 99.9 7.3E-24 2.5E-28 173.6 23.6 240 20-270 35-321 (337)
136 1jmx_B Amine dehydrogenase; ox 99.9 1.7E-23 5.8E-28 172.4 25.8 239 23-269 4-335 (349)
137 2ojh_A Uncharacterized protein 99.9 2.5E-23 8.4E-28 167.0 23.9 233 35-273 17-274 (297)
138 2ojh_A Uncharacterized protein 99.9 2E-23 6.7E-28 167.6 22.5 236 9-250 32-293 (297)
139 3hfq_A Uncharacterized protein 99.9 4.2E-22 1.4E-26 164.4 28.2 246 15-263 36-323 (347)
140 3u4y_A Uncharacterized protein 99.9 7E-22 2.4E-26 161.8 28.3 232 24-262 3-255 (331)
141 1xfd_A DIP, dipeptidyl aminope 99.9 3.3E-23 1.1E-27 186.9 19.5 245 19-268 17-356 (723)
142 3vgz_A Uncharacterized protein 99.9 4.1E-21 1.4E-25 158.4 27.6 228 19-249 89-334 (353)
143 3o4h_A Acylamino-acid-releasin 99.9 8.9E-22 3.1E-26 173.5 22.9 237 17-264 20-279 (582)
144 1ri6_A Putative isomerase YBHE 99.9 7.1E-21 2.4E-25 156.2 26.8 235 32-269 7-276 (343)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 9.1E-21 3.1E-25 161.2 27.2 158 16-176 90-279 (434)
146 1k32_A Tricorn protease; prote 99.9 7.3E-21 2.5E-25 178.2 27.4 251 12-273 197-474 (1045)
147 2ecf_A Dipeptidyl peptidase IV 99.9 8.9E-22 3E-26 178.1 20.1 244 20-268 110-423 (741)
148 2z3z_A Dipeptidyl aminopeptida 99.9 2.8E-21 9.5E-26 174.0 22.8 247 10-261 112-437 (706)
149 1pby_B Quinohemoprotein amine 99.9 4.7E-21 1.6E-25 156.9 21.3 231 31-269 2-279 (337)
150 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-21 5.6E-26 165.8 18.6 196 18-216 36-279 (434)
151 2z3z_A Dipeptidyl aminopeptida 99.9 6.3E-21 2.2E-25 171.7 23.0 243 21-273 28-357 (706)
152 3scy_A Hypothetical bacterial 99.9 2.4E-19 8.2E-24 148.7 30.3 245 17-266 48-346 (361)
153 1q7f_A NHL, brain tumor CG1071 99.9 1.4E-18 4.9E-23 139.4 30.3 239 16-262 27-283 (286)
154 1k32_A Tricorn protease; prote 99.9 2E-19 6.8E-24 168.5 28.1 238 12-261 330-639 (1045)
155 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.7E-19 5.9E-24 150.0 24.3 240 18-260 39-342 (365)
156 1xfd_A DIP, dipeptidyl aminope 99.9 4.2E-20 1.4E-24 166.7 21.1 244 12-260 51-394 (723)
157 1z68_A Fibroblast activation p 99.8 3.5E-20 1.2E-24 167.2 18.1 241 23-270 20-356 (719)
158 3hfq_A Uncharacterized protein 99.8 4.6E-18 1.6E-22 140.2 26.9 232 37-269 13-284 (347)
159 3fvz_A Peptidyl-glycine alpha- 99.8 7.3E-18 2.5E-22 138.2 27.9 238 17-259 22-322 (329)
160 4a5s_A Dipeptidyl peptidase 4 99.8 1.9E-19 6.5E-24 163.0 19.9 242 18-264 16-358 (740)
161 3pe7_A Oligogalacturonate lyas 99.8 4.2E-18 1.4E-22 142.3 26.5 257 10-270 22-339 (388)
162 2xdw_A Prolyl endopeptidase; a 99.8 3.4E-17 1.2E-21 147.6 32.5 243 16-261 122-416 (710)
163 2oiz_A Aromatic amine dehydrog 99.8 8.1E-18 2.8E-22 139.7 25.9 245 14-267 47-344 (361)
164 3o4h_A Acylamino-acid-releasin 99.8 7.2E-19 2.5E-23 155.0 19.2 204 60-271 21-238 (582)
165 1jmx_B Amine dehydrogenase; ox 99.8 7.2E-18 2.5E-22 138.6 20.5 197 20-224 44-334 (349)
166 3e5z_A Putative gluconolactona 99.8 2.3E-16 8E-21 127.2 28.0 244 10-266 19-293 (296)
167 3azo_A Aminopeptidase; POP fam 99.8 2.1E-17 7.2E-22 147.7 20.9 259 12-274 17-339 (662)
168 3no2_A Uncharacterized protein 99.8 5.2E-16 1.8E-20 123.9 26.1 237 28-269 3-262 (276)
169 2gop_A Trilobed protease; beta 99.8 4E-16 1.4E-20 128.4 26.2 233 19-272 59-342 (347)
170 3scy_A Hypothetical bacterial 99.8 1.1E-15 3.8E-20 126.6 29.0 220 37-258 24-290 (361)
171 2bkl_A Prolyl endopeptidase; m 99.8 7.1E-17 2.4E-21 145.2 23.4 245 16-268 118-405 (695)
172 3c5m_A Oligogalacturonate lyas 99.8 1.3E-17 4.3E-22 139.6 17.3 240 21-269 38-338 (396)
173 1z68_A Fibroblast activation p 99.8 1E-17 3.5E-22 151.1 15.9 232 20-259 61-391 (719)
174 1rwi_B Serine/threonine-protei 99.8 1E-15 3.5E-20 121.5 24.6 239 20-264 25-269 (270)
175 2dg1_A DRP35, lactonase; beta 99.7 1.9E-14 6.6E-19 117.7 32.4 233 13-249 39-300 (333)
176 2dg1_A DRP35, lactonase; beta 99.7 3.9E-16 1.3E-20 127.9 22.3 247 19-269 6-272 (333)
177 3pe7_A Oligogalacturonate lyas 99.7 6.7E-17 2.3E-21 135.0 17.4 240 14-257 76-380 (388)
178 3c5m_A Oligogalacturonate lyas 99.7 2.2E-16 7.4E-21 132.0 18.7 235 23-262 85-387 (396)
179 3azo_A Aminopeptidase; POP fam 99.7 1.7E-15 5.7E-20 135.4 23.4 252 12-269 61-379 (662)
180 1yr2_A Prolyl oligopeptidase; 99.7 6E-15 2E-19 133.6 26.4 247 16-267 160-448 (741)
181 3dsm_A Uncharacterized protein 99.7 1.3E-14 4.3E-19 118.9 24.5 238 20-268 45-310 (328)
182 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.7E-14 5.9E-19 119.8 24.5 231 33-264 5-297 (365)
183 2gop_A Trilobed protease; beta 99.7 2.2E-14 7.5E-19 117.9 24.4 232 19-273 15-304 (347)
184 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2.3E-13 7.7E-18 110.2 29.4 251 1-260 1-300 (314)
185 2z2n_A Virginiamycin B lyase; 99.7 1.4E-12 4.9E-17 104.5 33.9 240 14-262 10-257 (299)
186 3fvz_A Peptidyl-glycine alpha- 99.7 6.3E-14 2.1E-18 114.7 25.3 206 60-267 23-285 (329)
187 2oiz_A Aromatic amine dehydrog 99.7 3.4E-14 1.2E-18 117.9 22.2 236 29-270 14-306 (361)
188 3dsm_A Uncharacterized protein 99.7 4.5E-14 1.5E-18 115.6 22.7 222 37-263 14-257 (328)
189 4a5s_A Dipeptidyl peptidase 4 99.7 5E-14 1.7E-18 127.6 25.0 208 11-220 49-358 (740)
190 3e5z_A Putative gluconolactona 99.6 2E-13 6.9E-18 109.9 25.1 214 50-271 17-257 (296)
191 2xdw_A Prolyl endopeptidase; a 99.6 3.9E-13 1.3E-17 121.1 29.1 245 28-274 81-383 (710)
192 1q7f_A NHL, brain tumor CG1071 99.6 1.2E-13 4E-18 110.6 22.1 204 59-269 28-247 (286)
193 1qks_A Cytochrome CD1 nitrite 99.6 1.3E-12 4.4E-17 114.2 29.8 236 28-268 165-437 (567)
194 3sjl_D Methylamine dehydrogena 99.6 7.8E-13 2.7E-17 109.3 26.5 239 23-268 82-372 (386)
195 2mad_H Methylamine dehydrogena 99.6 4.1E-12 1.4E-16 105.7 30.7 233 25-266 27-357 (373)
196 3hrp_A Uncharacterized protein 99.6 1.6E-12 5.4E-17 109.5 28.1 236 19-257 131-408 (409)
197 2z2n_A Virginiamycin B lyase; 99.6 1.1E-11 3.6E-16 99.4 31.6 235 17-261 55-297 (299)
198 3iuj_A Prolyl endopeptidase; h 99.6 1.5E-12 5E-17 117.1 26.0 241 16-262 126-408 (693)
199 3no2_A Uncharacterized protein 99.6 5E-13 1.7E-17 106.6 19.2 189 71-269 4-205 (276)
200 1qks_A Cytochrome CD1 nitrite 99.6 1.4E-11 4.8E-16 107.6 29.7 248 20-268 198-547 (567)
201 2bkl_A Prolyl endopeptidase; m 99.6 1.4E-12 4.7E-17 117.3 23.8 239 27-269 76-360 (695)
202 1xip_A Nucleoporin NUP159; bet 99.5 2.6E-13 8.9E-18 112.5 17.0 168 20-201 39-230 (388)
203 1rwi_B Serine/threonine-protei 99.5 9.1E-13 3.1E-17 104.3 18.7 197 18-218 66-267 (270)
204 2qc5_A Streptogramin B lactona 99.5 1.4E-10 4.7E-15 92.9 31.6 239 16-262 17-262 (300)
205 3c75_H MADH, methylamine dehyd 99.5 9.9E-12 3.4E-16 104.4 25.5 237 23-266 122-409 (426)
206 1xip_A Nucleoporin NUP159; bet 99.5 1.5E-12 5.2E-17 107.9 18.2 170 62-245 39-230 (388)
207 2hz6_A Endoplasmic reticulum t 99.5 2.6E-14 9E-19 118.9 6.3 191 71-270 8-203 (369)
208 1kb0_A Quinohemoprotein alcoho 99.5 9.1E-12 3.1E-16 111.4 22.7 237 30-270 128-518 (677)
209 2qc5_A Streptogramin B lactona 99.5 4.8E-10 1.7E-14 89.7 30.0 233 17-258 60-299 (300)
210 3dr2_A Exported gluconolactona 99.5 8.7E-11 3E-15 94.9 25.2 231 11-256 37-303 (305)
211 1yiq_A Quinohemoprotein alcoho 99.5 2E-11 7E-16 109.3 23.2 236 30-269 121-515 (689)
212 1mda_H Methylamine dehydrogena 99.5 5.9E-11 2E-15 98.0 23.9 224 41-272 47-359 (368)
213 3g4e_A Regucalcin; six bladed 99.4 4.6E-10 1.6E-14 90.3 27.9 222 15-244 9-257 (297)
214 2hz6_A Endoplasmic reticulum t 99.4 3E-14 1E-18 118.5 3.1 189 29-223 8-200 (369)
215 1yr2_A Prolyl oligopeptidase; 99.4 8.9E-11 3.1E-15 106.3 25.4 237 27-268 115-403 (741)
216 3sjl_D Methylamine dehydrogena 99.4 2E-10 6.7E-15 95.0 24.7 239 24-268 38-329 (386)
217 3q7m_A Lipoprotein YFGL, BAMB; 99.4 3.3E-10 1.1E-14 94.2 26.5 231 29-268 102-346 (376)
218 2ghs_A AGR_C_1268P; regucalcin 99.4 6.4E-09 2.2E-13 84.8 30.0 213 20-244 50-287 (326)
219 2mad_H Methylamine dehydrogena 99.4 1.1E-09 3.6E-14 91.1 25.2 195 23-222 70-357 (373)
220 2qe8_A Uncharacterized protein 99.3 8.3E-11 2.8E-15 96.7 18.4 228 19-263 17-282 (343)
221 3g4e_A Regucalcin; six bladed 99.3 7.8E-09 2.7E-13 83.1 27.1 211 59-273 11-243 (297)
222 3q7m_A Lipoprotein YFGL, BAMB; 99.3 3.3E-09 1.1E-13 88.1 23.9 227 30-267 53-304 (376)
223 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 2.2E-09 7.5E-14 86.6 21.8 210 57-270 14-267 (314)
224 3c75_H MADH, methylamine dehyd 99.3 2.8E-09 9.6E-14 89.5 22.7 236 28-268 82-368 (426)
225 2qe8_A Uncharacterized protein 99.2 1.7E-09 5.9E-14 88.8 20.2 220 16-252 64-314 (343)
226 3hrp_A Uncharacterized protein 99.2 1.2E-08 4.2E-13 85.8 25.6 199 61-263 131-358 (409)
227 1kv9_A Type II quinohemoprotei 99.2 4.1E-09 1.4E-13 94.2 21.1 237 30-270 117-499 (668)
228 1fwx_A Nitrous oxide reductase 99.2 1.3E-08 4.4E-13 87.9 22.9 234 28-262 99-434 (595)
229 3dr2_A Exported gluconolactona 99.2 8.7E-09 3E-13 83.1 20.3 195 12-212 79-303 (305)
230 2ece_A 462AA long hypothetical 99.1 1.7E-07 6E-12 78.3 25.9 217 28-247 93-399 (462)
231 2ghs_A AGR_C_1268P; regucalcin 99.1 7.4E-08 2.5E-12 78.5 23.4 203 62-271 50-271 (326)
232 1mda_H Methylamine dehydrogena 99.1 1.1E-08 3.9E-13 84.4 17.3 199 23-225 69-356 (368)
233 3iuj_A Prolyl endopeptidase; h 99.1 2.5E-08 8.5E-13 89.6 20.6 195 22-218 178-408 (693)
234 1w6s_A Methanol dehydrogenase 99.1 5.6E-08 1.9E-12 85.4 22.2 233 33-269 124-513 (599)
235 2ad6_A Methanol dehydrogenase 99.0 1E-07 3.5E-12 83.6 23.5 236 30-269 115-504 (571)
236 1yiq_A Quinohemoprotein alcoho 99.0 5.3E-08 1.8E-12 87.3 21.6 188 38-225 181-515 (689)
237 3hxj_A Pyrrolo-quinoline quino 99.0 7.2E-08 2.5E-12 78.2 20.5 216 30-260 107-325 (330)
238 1kb0_A Quinohemoprotein alcoho 99.0 4.6E-08 1.6E-12 87.5 20.0 191 30-223 77-354 (677)
239 1npe_A Nidogen, entactin; glyc 99.0 2.4E-06 8.2E-11 67.3 27.9 231 31-268 2-247 (267)
240 2fp8_A Strictosidine synthase; 99.0 9E-07 3.1E-11 71.8 25.6 246 6-259 6-313 (322)
241 2iwa_A Glutamine cyclotransfer 99.0 5.5E-07 1.9E-11 70.6 22.6 192 21-216 23-238 (266)
242 1flg_A Protein (quinoprotein e 99.0 3.2E-07 1.1E-11 80.6 23.4 238 30-270 117-527 (582)
243 3hxj_A Pyrrolo-quinoline quino 98.9 3.9E-08 1.3E-12 79.8 15.6 229 20-268 61-292 (330)
244 3nol_A Glutamine cyclotransfer 98.9 2.4E-07 8.1E-12 72.0 19.0 179 21-204 45-244 (262)
245 2iwa_A Glutamine cyclotransfer 98.9 4.1E-06 1.4E-10 65.7 23.9 206 51-261 10-239 (266)
246 3nok_A Glutaminyl cyclase; bet 98.8 1.1E-06 3.8E-11 68.3 19.9 176 21-203 57-253 (268)
247 4a2l_A BT_4663, two-component 98.8 1.5E-05 5.3E-10 72.6 30.4 238 21-263 175-440 (795)
248 2p4o_A Hypothetical protein; p 98.8 3.1E-05 1.1E-09 62.2 28.7 223 19-246 32-275 (306)
249 1npe_A Nidogen, entactin; glyc 98.8 1.9E-05 6.4E-10 62.1 25.9 202 19-223 36-246 (267)
250 3mbr_X Glutamine cyclotransfer 98.8 3.1E-06 1.1E-10 65.1 20.3 183 17-204 17-223 (243)
251 1k3i_A Galactose oxidase precu 98.7 7.4E-07 2.5E-11 79.5 18.6 239 23-262 190-500 (656)
252 2ece_A 462AA long hypothetical 98.7 1.5E-06 5.2E-11 72.7 18.7 181 22-203 141-399 (462)
253 3nol_A Glutamine cyclotransfer 98.7 1.7E-05 6E-10 61.6 21.5 188 52-246 33-243 (262)
254 4a2l_A BT_4663, two-component 98.7 0.00017 6E-09 65.7 31.5 235 18-262 356-617 (795)
255 1kv9_A Type II quinohemoprotei 98.6 5E-06 1.7E-10 74.3 19.3 187 39-225 177-498 (668)
256 1fwx_A Nitrous oxide reductase 98.6 1.9E-05 6.4E-10 68.4 21.7 195 71-269 100-381 (595)
257 3v9f_A Two-component system se 98.6 0.00046 1.6E-08 62.8 31.2 238 19-264 211-483 (781)
258 2xe4_A Oligopeptidase B; hydro 98.5 1.5E-05 5.2E-10 72.2 19.1 193 16-213 170-398 (751)
259 3nok_A Glutaminyl cyclase; bet 98.5 2.6E-05 9E-10 60.6 17.4 169 93-268 44-219 (268)
260 3mbr_X Glutamine cyclotransfer 98.4 5E-05 1.7E-09 58.5 18.3 169 93-267 10-187 (243)
261 1w6s_A Methanol dehydrogenase 98.4 4.1E-05 1.4E-09 67.3 20.2 196 72-267 62-350 (599)
262 3tc9_A Hypothetical hydrolase; 98.4 0.0003 1E-08 59.4 24.6 194 20-219 138-374 (430)
263 3v9f_A Two-component system se 98.4 0.00059 2E-08 62.1 28.3 238 19-263 163-440 (781)
264 2ad6_A Methanol dehydrogenase 98.4 0.0001 3.5E-09 64.6 21.9 185 39-224 175-503 (571)
265 1k3i_A Galactose oxidase precu 98.4 1E-05 3.5E-10 72.2 15.0 222 23-248 247-530 (656)
266 3v64_C Agrin; beta propeller, 98.4 0.0007 2.4E-08 55.4 28.8 241 19-267 34-283 (349)
267 2p4o_A Hypothetical protein; p 98.3 0.00072 2.5E-08 54.1 26.1 203 50-262 22-244 (306)
268 2fp8_A Strictosidine synthase; 98.3 0.0006 2E-08 55.0 23.2 189 20-214 81-312 (322)
269 2vpj_A Kelch-like protein 12; 98.3 0.00036 1.2E-08 55.7 20.8 229 29-262 14-281 (301)
270 4hw6_A Hypothetical protein, I 98.2 0.0016 5.6E-08 54.9 26.2 200 20-223 140-380 (433)
271 3qqz_A Putative uncharacterize 98.2 0.00099 3.4E-08 51.8 28.4 199 13-214 21-252 (255)
272 3amr_A 3-phytase; beta-propell 98.2 0.00093 3.2E-08 54.2 21.6 193 71-267 39-272 (355)
273 3v65_B Low-density lipoprotein 98.2 0.002 6.8E-08 53.5 25.9 202 19-223 116-326 (386)
274 2xe4_A Oligopeptidase B; hydro 98.2 0.00031 1E-08 63.7 20.4 192 62-257 175-398 (751)
275 1flg_A Protein (quinoprotein e 98.2 0.00032 1.1E-08 61.6 19.8 193 72-269 68-365 (582)
276 3v64_C Agrin; beta propeller, 98.2 0.002 6.7E-08 52.7 25.7 200 20-222 74-282 (349)
277 1ijq_A LDL receptor, low-densi 98.2 0.0018 6.2E-08 52.2 30.0 223 40-267 10-246 (316)
278 3v65_B Low-density lipoprotein 98.1 0.0024 8.1E-08 53.0 28.1 237 23-267 81-326 (386)
279 2xn4_A Kelch-like protein 2; s 98.1 0.0012 4.1E-08 52.6 20.6 227 31-263 17-280 (302)
280 3amr_A 3-phytase; beta-propell 98.1 0.0026 8.8E-08 51.6 22.6 190 29-223 39-272 (355)
281 3ii7_A Kelch-like protein 7; p 98.1 0.0014 4.9E-08 52.3 20.6 226 32-263 14-276 (306)
282 1ijq_A LDL receptor, low-densi 98.0 0.0031 1E-07 50.8 25.8 203 18-223 29-246 (316)
283 3p5b_L Low density lipoprotein 98.0 0.0044 1.5E-07 51.7 29.9 231 32-267 85-328 (400)
284 3p5b_L Low density lipoprotein 98.0 0.0047 1.6E-07 51.5 27.5 204 17-223 110-328 (400)
285 3tc9_A Hypothetical hydrolase; 97.9 0.0062 2.1E-07 51.3 22.3 150 62-214 138-300 (430)
286 3sov_A LRP-6, low-density lipo 97.9 0.0061 2.1E-07 49.1 26.9 223 39-267 12-246 (318)
287 1zgk_A Kelch-like ECH-associat 97.9 0.0042 1.4E-07 49.7 19.8 229 29-263 24-291 (308)
288 1n7d_A LDL receptor, low-densi 97.8 0.0003 1E-08 63.1 13.6 226 38-267 384-622 (699)
289 3m0c_C LDL receptor, low-densi 97.8 0.02 6.7E-07 52.1 28.8 226 38-267 402-640 (791)
290 3m0c_C LDL receptor, low-densi 97.8 0.021 7.3E-07 51.9 27.2 203 17-222 422-639 (791)
291 3kya_A Putative phosphatase; s 97.7 0.017 5.9E-07 49.3 26.3 242 20-264 140-480 (496)
292 4hw6_A Hypothetical protein, I 97.7 0.014 4.8E-07 49.2 21.1 115 17-132 180-303 (433)
293 4asc_A Kelch repeat and BTB do 97.7 0.014 4.9E-07 46.6 21.3 226 33-265 8-283 (315)
294 2xzh_A Clathrin heavy chain 1; 97.6 0.02 6.7E-07 45.9 30.4 232 23-263 71-336 (365)
295 2vpj_A Kelch-like protein 12; 97.6 0.0089 3E-07 47.4 17.4 186 29-218 62-281 (301)
296 2xn4_A Kelch-like protein 2; s 97.5 0.0081 2.8E-07 47.7 16.8 186 29-218 61-279 (302)
297 2p9w_A MAL S 1 allergenic prot 97.5 0.015 5E-07 46.8 17.8 160 56-215 8-215 (334)
298 3ii7_A Kelch-like protein 7; p 97.5 0.01 3.4E-07 47.3 17.0 185 29-218 55-275 (306)
299 3qqz_A Putative uncharacterize 97.5 0.02 6.8E-07 44.4 25.3 200 55-257 21-251 (255)
300 1n7d_A LDL receptor, low-densi 97.4 0.00063 2.1E-08 61.1 9.9 201 20-223 407-622 (699)
301 3sov_A LRP-6, low-density lipo 97.4 0.031 1.1E-06 45.0 24.8 202 19-223 35-246 (318)
302 1bpo_A Protein (clathrin); cla 97.4 0.043 1.5E-06 45.8 31.0 231 23-263 70-335 (494)
303 3ei3_A DNA damage-binding prot 97.2 0.15 5.1E-06 48.5 31.7 253 18-276 553-891 (1158)
304 2p9w_A MAL S 1 allergenic prot 97.1 0.077 2.6E-06 42.7 21.8 192 21-213 15-263 (334)
305 2woz_A Kelch repeat and BTB do 97.1 0.08 2.7E-06 42.3 21.2 220 41-265 25-293 (318)
306 2xbg_A YCF48-like protein; pho 97.1 0.085 2.9E-06 42.5 23.2 189 18-213 121-320 (327)
307 1zgk_A Kelch-like ECH-associat 97.0 0.034 1.2E-06 44.3 14.9 186 29-218 70-290 (308)
308 3s94_A LRP-6, low-density lipo 97.0 0.17 5.7E-06 44.8 23.2 198 18-218 39-246 (619)
309 4asc_A Kelch repeat and BTB do 97.0 0.1 3.4E-06 41.6 17.6 188 28-219 44-281 (315)
310 2be1_A Serine/threonine-protei 96.9 0.0055 1.9E-07 49.7 9.6 189 73-264 11-236 (339)
311 2uvk_A YJHT; unknown function, 96.9 0.092 3.1E-06 42.6 17.2 93 29-123 19-128 (357)
312 2woz_A Kelch repeat and BTB do 96.8 0.14 4.9E-06 40.8 17.0 190 27-220 54-292 (318)
313 3kya_A Putative phosphatase; s 96.8 0.21 7.2E-06 42.7 23.7 150 63-213 141-339 (496)
314 3sre_A PON1, serum paraoxonase 96.7 0.19 6.4E-06 41.0 20.6 196 14-214 45-297 (355)
315 1xi4_A Clathrin heavy chain; a 96.7 0.13 4.5E-06 49.3 17.7 231 24-263 71-335 (1630)
316 3s94_A LRP-6, low-density lipo 96.7 0.3 1E-05 43.1 25.7 225 38-267 16-251 (619)
317 2be1_A Serine/threonine-protei 96.6 0.17 5.8E-06 41.0 16.0 105 31-136 11-133 (339)
318 4a0p_A LRP6, LRP-6, low-densit 96.5 0.42 1.4E-05 42.3 28.7 224 38-267 13-245 (628)
319 1bpo_A Protein (clathrin); cla 96.5 0.32 1.1E-05 40.7 24.7 222 37-269 45-299 (494)
320 2xbg_A YCF48-like protein; pho 96.3 0.31 1.1E-05 39.1 27.9 231 18-260 35-279 (327)
321 2xzh_A Clathrin heavy chain 1; 96.2 0.38 1.3E-05 38.7 27.7 224 37-271 46-302 (365)
322 4a0p_A LRP6, LRP-6, low-densit 96.0 0.75 2.6E-05 40.7 27.2 196 19-218 37-240 (628)
323 2uvk_A YJHT; unknown function, 95.8 0.38 1.3E-05 38.9 14.5 55 167-221 286-348 (357)
324 3pbp_A Nucleoporin NUP82; beta 95.6 0.81 2.8E-05 38.2 22.1 106 27-134 29-159 (452)
325 2ism_A Putative oxidoreductase 95.6 0.72 2.5E-05 37.4 27.0 101 18-121 30-153 (352)
326 1xi4_A Clathrin heavy chain; a 95.6 1.6 5.3E-05 42.4 18.7 217 37-267 45-297 (1630)
327 2zwa_A Leucine carboxyl methyl 95.1 1.5 5.3E-05 39.2 16.9 191 28-219 396-639 (695)
328 3ei3_A DNA damage-binding prot 95.0 2.6 8.8E-05 40.2 26.7 173 83-259 808-999 (1158)
329 2zwa_A Leucine carboxyl methyl 94.7 2.2 7.6E-05 38.2 20.3 194 70-263 396-639 (695)
330 3pbp_A Nucleoporin NUP82; beta 94.2 2.2 7.4E-05 35.7 18.6 70 184-254 124-207 (452)
331 3ott_A Two-component system se 93.8 3.6 0.00012 37.1 27.1 229 18-262 21-263 (758)
332 3a9g_A Putative uncharacterize 93.7 2.3 8E-05 34.5 27.7 102 18-121 28-153 (354)
333 3das_A Putative oxidoreductase 93.7 2.3 8E-05 34.4 14.8 109 13-121 26-158 (347)
334 3qhy_B Beta-lactamase inhibito 93.6 2.1 7.1E-05 33.5 19.2 222 20-262 25-249 (282)
335 1cru_A Protein (soluble quinop 93.5 3 0.0001 35.2 15.6 105 18-122 26-163 (454)
336 1tl2_A L10, protein (tachylect 93.1 2.2 7.4E-05 32.2 15.9 104 103-211 41-159 (236)
337 3sre_A PON1, serum paraoxonase 92.7 3.5 0.00012 33.5 21.2 153 62-215 51-252 (355)
338 3ott_A Two-component system se 92.2 6.4 0.00022 35.4 30.4 234 19-263 146-405 (758)
339 3qhy_B Beta-lactamase inhibito 92.1 3.5 0.00012 32.2 16.3 164 39-215 80-246 (282)
340 2g8s_A Glucose/sorbosone dehyd 92.1 4.1 0.00014 33.0 24.6 103 18-122 17-149 (353)
341 2ism_A Putative oxidoreductase 91.9 4.3 0.00015 32.8 20.9 103 18-122 74-222 (352)
342 1tl2_A L10, protein (tachylect 91.4 3.6 0.00012 31.0 17.4 172 29-208 3-203 (236)
343 4gq2_M Nucleoporin NUP120; bet 86.8 9.2 0.00031 35.7 12.3 38 186-223 237-274 (950)
344 3a9g_A Putative uncharacterize 85.4 13 0.00045 30.0 22.9 101 18-120 72-215 (354)
345 4gq2_M Nucleoporin NUP120; bet 85.2 1.8 6.3E-05 40.3 6.9 39 19-57 236-274 (950)
346 3sbq_A Nitrous-oxide reductase 81.7 3.8 0.00013 35.5 6.8 73 60-133 322-408 (638)
347 4fhn_B Nucleoporin NUP120; pro 78.4 2 6.9E-05 40.9 4.6 38 20-57 239-276 (1139)
348 3sbq_A Nitrous-oxide reductase 78.4 19 0.00065 31.4 9.9 104 156-259 334-478 (638)
349 3f7f_A Nucleoporin NUP120; nuc 78.4 4.2 0.00014 36.3 6.2 38 19-58 222-259 (729)
350 4fhn_B Nucleoporin NUP120; pro 76.1 3 0.0001 39.7 5.1 38 186-223 239-276 (1139)
351 3f7f_A Nucleoporin NUP120; nuc 75.6 5.9 0.0002 35.4 6.4 36 187-224 224-259 (729)
352 2wg3_C Hedgehog-interacting pr 67.4 56 0.0019 27.5 13.2 105 20-124 15-160 (463)
353 1cru_A Protein (soluble quinop 62.0 70 0.0024 26.8 19.1 101 103-203 27-162 (454)
354 3zwu_A Alkaline phosphatase PH 59.5 56 0.0019 28.6 9.1 58 21-78 478-548 (592)
355 4a9v_A PHOX; hydrolase, beta-p 57.4 84 0.0029 27.4 9.6 60 19-78 476-548 (592)
356 3das_A Putative oxidoreductase 53.3 87 0.003 25.2 18.8 80 54-133 25-116 (347)
357 3zwu_A Alkaline phosphatase PH 44.6 1.1E+02 0.0037 26.8 8.5 58 63-120 478-548 (592)
358 2g8s_A Glucose/sorbosone dehyd 44.6 1.2E+02 0.004 24.2 21.7 44 159-202 292-340 (353)
359 3s25_A Hypothetical 7-bladed b 43.4 1.2E+02 0.004 23.8 24.7 209 28-258 23-254 (302)
360 4a9v_A PHOX; hydrolase, beta-p 38.8 1.9E+02 0.0063 25.3 8.9 59 62-120 477-548 (592)
361 4hvt_A Ritya.17583.B, post-pro 28.5 3.2E+02 0.011 24.4 21.3 193 22-217 132-383 (711)
362 1q47_A Semaphorin 3A; beta pro 24.8 2.7E+02 0.0093 23.6 7.6 52 159-210 424-487 (495)
363 2wg3_C Hedgehog-interacting pr 24.6 3.1E+02 0.011 23.0 14.6 53 61-113 14-79 (463)
364 3s25_A Hypothetical 7-bladed b 23.2 2.7E+02 0.0091 21.6 23.8 174 24-214 58-254 (302)
365 3mwp_A Nucleoprotein; structur 23.0 25 0.00085 29.1 0.9 19 245-263 162-180 (577)
366 4h3o_A Lectin; cadmium, plant 21.0 1.7E+02 0.0057 18.5 8.6 24 65-90 54-77 (105)
367 3uc1_A DNA gyrase subunit A; D 20.6 3.2E+02 0.011 21.6 21.2 154 19-174 95-278 (327)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.2e-49 Score=319.83 Aligned_cols=263 Identities=17% Similarity=0.267 Sum_probs=234.9
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
...++++|.++|.+++|+|++++|++++.|++|++||+.++..+..+..|..+|.+++|+|++++|++|+.|++|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 35578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC---CeEEEeecCC
Q 023772 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK---TEIIGGSVDG 166 (277)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~d~ 166 (277)
++++++..+.+|...|.+++|+|+++++++|+.|++|++||++... .....+..|...+.++.+++ ..+++|+.|+
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 9999999999999999999999999999999999999999997642 23455677888899999876 3599999999
Q ss_pred cEEEEEccCCcccc---cCCCCCeeEEEEeC--CCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCc
Q 023772 167 TVRTFDIRVGRELS---DDLGQPVNCISMSN--DGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA 241 (277)
Q Consensus 167 ~i~i~d~~~~~~~~---~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (277)
+|++||++...... ..+...+..+.|+| ++.+|++++.|++|++||+++++++..+.+|... ...++++|++.
T Consensus 164 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~--v~~~~~~p~~~ 241 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN--VSFAVFHPTLP 241 (304)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEECSSSS
T ss_pred eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCC--EEEEEECCCCC
Confidence 99999998765432 23446788999987 7789999999999999999999999999998644 45567899999
Q ss_pred eEEeecCCCeEEEEECcCccceeeeccCcceeEe
Q 023772 242 HVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKL 275 (277)
Q Consensus 242 ~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~ 275 (277)
+|++|+.||.|++||..+++++++++.|...+..
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~ 275 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC 275 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCSSSSEEE
T ss_pred EEEEEcCCCeEEEEECCCCceeeeccCCCccEEE
Confidence 9999999999999999999999999998776654
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.8e-48 Score=325.59 Aligned_cols=262 Identities=25% Similarity=0.384 Sum_probs=236.8
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.++|++++|+|++.+|+||+.|++|++||..+++...++.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecCCcE
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i 168 (277)
+++++.++.+|...|.+++|+|+++++++|+.|++|++||+++.. ....+..|...+..+.+++ ..+++|+.|++|
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 999999999999999999999999999999999999999998653 4555667778888887765 459999999999
Q ss_pred EEEEccCCcccc--cCCCCCeeEEEEeCC--------------------CCEEEEEecCCeEEEEECCCCceEEEEeccc
Q 023772 169 RTFDIRVGRELS--DDLGQPVNCISMSND--------------------GNCILASCLDSTLRLLDRSTGELLQEYKGHI 226 (277)
Q Consensus 169 ~i~d~~~~~~~~--~~~~~~v~~~~~s~~--------------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 226 (277)
++||+++++... ..+...|.+++|+|+ |.+|++|+.|+.|++||+++++++..+.+|.
T Consensus 259 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 259 RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 999998876543 245678999999996 6789999999999999999999999999886
Q ss_pred cceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
.. +..++++|++.+|++|+.|+.|++||+.+++++..+.+|...|..+
T Consensus 339 ~~--v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l 386 (410)
T 1vyh_C 339 NW--VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386 (410)
T ss_dssp SC--EEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEE
T ss_pred Cc--EEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEE
Confidence 43 4566789999999999999999999999999999999999887654
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.8e-46 Score=306.83 Aligned_cols=265 Identities=20% Similarity=0.309 Sum_probs=232.9
Q ss_pred cccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
.....|++|.++|.+++|+|++++|+||+.|++|++||..+++.+..+..|...|.+++|+|++++|++|+.|+.+++||
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC----ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--eEEEe
Q 023772 89 VSTG----RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGG 162 (277)
Q Consensus 89 ~~~~----~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g 162 (277)
+.++ .....+.+|...|.++.|.+++ .+++++.|++|++||+++. .....+..|...+.++.++++ .+++|
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETG--QQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCC--cEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 9865 3566788999999999999876 4889999999999999764 345566778888988888764 58999
Q ss_pred ecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCC
Q 023772 163 SVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSD 240 (277)
Q Consensus 163 ~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
+.|++|++||++++..... .+...|++++|+|++++|++|+.|++|++||+++++.+..+..+........++++|++
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence 9999999999998765433 45678999999999999999999999999999998888777644323345667899999
Q ss_pred ceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 241 AHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 241 ~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
.++++|+.|+.|++||+.+++.+..+.+|...|..+
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~ 318 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCL 318 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEE
Confidence 999999999999999999999999999999988765
No 4
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.2e-45 Score=301.56 Aligned_cols=264 Identities=31% Similarity=0.569 Sum_probs=233.8
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.++|.+++|+|++++|++|+.|+.|++|+..+++....+.+|...|.+++|+|++++|++++.|+.|++||++
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecCCcE
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i 168 (277)
+++++..+.+|...|.++.|+|+++++++++.|++|++||++... ....+..+...+..+.+++ ..+++++.|+.|
T Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 96 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE--EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999997643 3455666777888888765 469999999999
Q ss_pred EEEEccCCccccc---CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEec-CCCceEE
Q 023772 169 RTFDIRVGRELSD---DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLT-NSDAHVT 244 (277)
Q Consensus 169 ~i~d~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 244 (277)
++||+++++.+.. ....++.+++|+|++++|++++.|+.|++||+++++++..+.+|..........++ +++.+++
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 253 (312)
T ss_dssp EEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEE
T ss_pred EEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEE
Confidence 9999998765432 34567999999999999999999999999999999999999888654433333343 6788999
Q ss_pred eecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 245 sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
+|+.||.|++||+.+++++.++++|...|..+
T Consensus 254 sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 285 (312)
T 4ery_A 254 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 285 (312)
T ss_dssp ECCTTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EECCCCEEEEEECCCchhhhhhhccCCcEEEE
Confidence 99999999999999999999999998877543
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.6e-45 Score=304.97 Aligned_cols=266 Identities=18% Similarity=0.242 Sum_probs=233.0
Q ss_pred cccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
.....|.+|.++|++++|+|++++|+|||.|++|++||..+++....+..|...|.+++|+|++.+|++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC------ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC----Ce
Q 023772 89 VSTG------RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK----TE 158 (277)
Q Consensus 89 ~~~~------~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 158 (277)
+... .....+..|...|.++.|+|++..+++++.|++|++||+++.. ....+..|...+..+.+.+ ..
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ--LLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 8643 3456778899999999999999999999999999999997653 4556677788887777653 46
Q ss_pred EEEeecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEe
Q 023772 159 IIGGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCL 236 (277)
Q Consensus 159 ~~~g~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 236 (277)
+++|+.|++|++||+++++.+.. .+...|++++|+|++.+|++++.|++|++||+++++.+..+..+........+++
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 99999999999999998876543 4567899999999999999999999999999999888777765433333456789
Q ss_pred cCCCceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 237 TNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 237 ~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
+|++.++++|+.|+.|++||+.+++.+..+.+|...|..+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l 332 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTL 332 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEE
Confidence 9999999999999999999999999999999999888764
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=303.04 Aligned_cols=261 Identities=17% Similarity=0.305 Sum_probs=228.1
Q ss_pred ceeeccCCcEEEEEEeCC----CCEEEEEeCCCcEEEEcCCCCee--EEEEeccCccEEEEEEcCCCCEEEEEeCCCcEE
Q 023772 12 NVLKGHEGAVLAARFNGD----GNYCLSCGKDRTIRLWNPHRGIH--IKTYKSHGREVRDVHVTADNSKLISCGGDRQIF 85 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~----~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~ 85 (277)
..+.+|.++|.+++|+++ +.+|+|||.|++||+||..+++. ...+.+|...|.+++|++++..+++++.|++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 345689999999999874 67999999999999999877653 456889999999999999999999999999999
Q ss_pred EEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEee
Q 023772 86 YWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGS 163 (277)
Q Consensus 86 ~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~ 163 (277)
+||+++++.+..+..|...+.+++|+|+++++++++.|+.|++|+++... ....+..+...+..+.+++ ..+++|+
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~--~~~~~~~~~~~v~~~~~spdg~~lasg~ 183 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKYLASGA 183 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS--EEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc--eeEEecCCCceEEEEEECCCCCEEEEEc
Confidence 99999999999999999999999999999999999999999999997653 3444555666777777765 4699999
Q ss_pred cCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCc
Q 023772 164 VDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA 241 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (277)
.|+.|++||+++++.+.. .+..+|++++|+|++++|++++.|+.|++||+++++++..+.+|.. .+..++++|++.
T Consensus 184 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~sp~~~ 261 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS--WVLNVAFCPDDT 261 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSS
T ss_pred CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC--ceEEEEECCCCC
Confidence 999999999998876543 3556899999999999999999999999999999999999998854 346678999999
Q ss_pred eEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 242 HVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 242 ~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
+|++|+.|+.|++||+.+++++.++.+|...|..+
T Consensus 262 ~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v 296 (321)
T 3ow8_A 262 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 296 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEE
Confidence 99999999999999999999999999998877654
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-44 Score=295.71 Aligned_cols=247 Identities=23% Similarity=0.416 Sum_probs=206.8
Q ss_pred cceeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEcCCC-----CeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcE
Q 023772 11 ANVLKGHEGAVLAARFNGDG-NYCLSCGKDRTIRLWNPHR-----GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQI 84 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~-~~l~s~s~d~~v~iwd~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v 84 (277)
...|.||.++|.+++|+|++ ++|+|||.|++|++|++.. +.++..+.+|...|.+++|+|++++|++|+.|++|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 45688999999999999965 8999999999999999753 34577899999999999999999999999999999
Q ss_pred EEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC-------
Q 023772 85 FYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT------- 157 (277)
Q Consensus 85 ~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 157 (277)
++||+++++++..+.+|..+|.+++|+|++.++++|+.|++|++||++. .....+..+...+..+.+.+.
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG---QCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECCC------C
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC---CeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999864 244556677778888877653
Q ss_pred -eEEEeecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEecccc-------
Q 023772 158 -EIIGGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHIC------- 227 (277)
Q Consensus 158 -~~~~g~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~------- 227 (277)
.+++++.|++|++||++..+.... .+..+|++++|+|+|++|++++.|+.|++||+.+++++..+..+..
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s 246 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFS 246 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEEC
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEc
Confidence 589999999999999987764432 4567899999999999999999999999999998877666543210
Q ss_pred ---------------------------------------ceeeeeeEecCCCceEEeecCCCeEEEEECcCc
Q 023772 228 ---------------------------------------KSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 228 ---------------------------------------~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~ 260 (277)
......++++|++++|++|+.||.|++||+.++
T Consensus 247 p~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 247 PNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp SSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 011234566777777777777777777777654
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-44 Score=306.86 Aligned_cols=244 Identities=25% Similarity=0.415 Sum_probs=220.1
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.++|.+++|+|++++|++|+.|++|++||+.+++++.++.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~ 222 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 222 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--------------
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK-------------- 156 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 156 (277)
+++++.++.+|...|.++.+++++.++++|+.|++|++||++... ....+..+...+.++.+.+
T Consensus 223 ~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 300 (410)
T 1vyh_C 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE--CKAELREHRHVVECISWAPESSYSSISEATGSE 300 (410)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC
T ss_pred CCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--eeeEecCCCceEEEEEEcCcccccchhhhcccc
Confidence 999999999999999999999999999999999999999997643 3445667778888888765
Q ss_pred --------CeEEEeecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccc
Q 023772 157 --------TEIIGGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226 (277)
Q Consensus 157 --------~~~~~g~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 226 (277)
..+++|+.|++|++||+++++.+.. .+...|++++|+|+|++|++|+.|+.|++||+.+++++..+.+|.
T Consensus 301 ~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~ 380 (410)
T 1vyh_C 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380 (410)
T ss_dssp -------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCS
T ss_pred ccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC
Confidence 3589999999999999998876543 356689999999999999999999999999999999999999886
Q ss_pred cceeeeeeEecCCCceEEeecCCCeEEEEECc
Q 023772 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~ 258 (277)
.. +..++++|++.+|++|+.||.|++|+++
T Consensus 381 ~~--v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 381 HF--VTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SC--EEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred Cc--EEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 43 5667889999999999999999999863
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.4e-45 Score=305.40 Aligned_cols=264 Identities=23% Similarity=0.384 Sum_probs=225.2
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...|.+|.++|++++|+|++++|+|||.|++|+|||..+++....+..|...|.+++|+|++++|++|+.|+.+++||+.
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCc-------eeEEeecccCceeEEEEecC-CCEEEEEeCCCcEEEEeCccCCCcceEee-----ccccCcEEEEEec--
Q 023772 91 TGR-------VIRKFRGHESEVNAVKFNEY-SSVVVSAGYDQSLRAWDCRSHSTEPIQII-----DSFQDSVMSVCLT-- 155 (277)
Q Consensus 91 ~~~-------~~~~~~~h~~~v~~i~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~-- 155 (277)
+.. ....+.+|...|.++.|.|+ +..+++|+.|++|++||+++... ...+ ..|...+..+.+.
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR--ISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE--EEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE--EEEeecccCCCCccCeEEEEeecC
Confidence 532 34567899999999999987 45799999999999999986543 2222 3566778888774
Q ss_pred -CCeEEEeecCCcEEEEEccCC-cccc--cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccc---
Q 023772 156 -KTEIIGGSVDGTVRTFDIRVG-RELS--DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK--- 228 (277)
Q Consensus 156 -~~~~~~g~~d~~i~i~d~~~~-~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~--- 228 (277)
++.+++|+.|++|++||++.. +.+. ..+...|++++|+|++++|++|+.|++|++||+++++.+..+..+...
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 456999999999999999844 3322 345678999999999999999999999999999999998888654321
Q ss_pred --eeeeeeEecCCCceEEeecCCCeEEEEECcCccceeee----ccCcceeEee
Q 023772 229 --SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKF----KAHSLVVKLL 276 (277)
Q Consensus 229 --~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~----~~h~~~v~~~ 276 (277)
.....++++|++.++++|+.||.|++||..+++.+..+ .+|...|..+
T Consensus 297 ~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 297 ELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp SSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred ccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 12456789999999999999999999999999988877 6788877654
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.1e-44 Score=295.81 Aligned_cols=245 Identities=19% Similarity=0.214 Sum_probs=200.3
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEE----EEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK----TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~----~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
...|+.+|.+++|++++ .|++|+.||+|+|||+.+++.+. ...+|...|++++|+|++++|++|+.|++|++||+
T Consensus 78 ~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 34578899999999985 78899999999999998876543 34589999999999999999999999999999999
Q ss_pred CCCceeEEeecccCceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC---CeEEEeecC
Q 023772 90 STGRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK---TEIIGGSVD 165 (277)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~d 165 (277)
++++++.++.+|...|.+++|++++. ++++++.|++|++||++............+...+.++.+.+ ..+++|+.|
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 99999999999999999999999874 78999999999999998764432222233444567777664 347899999
Q ss_pred CcEEEEEccCCccccc--CCCCCeeEEEEeCCC-CEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCc-
Q 023772 166 GTVRTFDIRVGRELSD--DLGQPVNCISMSNDG-NCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA- 241 (277)
Q Consensus 166 ~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 241 (277)
++|++||+++++.+.. .+...|++++|+|++ ++|++|+.|++|++||+++++++ .+.+|.. .+..++|+|++.
T Consensus 237 g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~--~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRD--FVRDATWSPLNHS 313 (344)
T ss_dssp SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSS--CEEEEEECSSSTT
T ss_pred CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCC--CEEEEEEeCCCCe
Confidence 9999999998876543 456789999999998 57899999999999999988765 4677754 356678899876
Q ss_pred eEEeecCCCeEEEEECcCccc
Q 023772 242 HVTGGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 242 ~l~sgs~d~~i~iwd~~~~~~ 262 (277)
+|++|+.|++|++|++.+..+
T Consensus 314 llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 314 LLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEEEEETTSCEEEEECCC---
T ss_pred EEEEEcCCCeEEEEECCCCCC
Confidence 577999999999999987644
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1e-43 Score=288.41 Aligned_cols=245 Identities=17% Similarity=0.234 Sum_probs=205.2
Q ss_pred ceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCC--CeeEEEEeccCccEEEEEEcCC--CCEEEEEeCCCcEEEE
Q 023772 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR--GIHIKTYKSHGREVRDVHVTAD--NSKLISCGGDRQIFYW 87 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~t~s~d~~v~~w 87 (277)
.++.+|.++|.+++|+|+|++|+||+.|++|+|||+.. ++.+.++.+|.++|++++|+++ +++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 46789999999999999999999999999999999864 4678899999999999999863 7899999999999999
Q ss_pred ECCCCc--eeEEeecccCceeEEEEecC--CCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC------
Q 023772 88 DVSTGR--VIRKFRGHESEVNAVKFNEY--SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT------ 157 (277)
Q Consensus 88 d~~~~~--~~~~~~~h~~~v~~i~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 157 (277)
|+++++ .+..+..|...|.+++|+|+ +.+|++++.|++|++||++.........+..|...+.++.+++.
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998874 56678889999999999997 88999999999999999976533233456677888888888763
Q ss_pred ---------eEEEeecCCcEEEEEccCCcc----c--ccCCCCCeeEEEEeCCC---CEEEEEecCCeEEEEECCCCc--
Q 023772 158 ---------EIIGGSVDGTVRTFDIRVGRE----L--SDDLGQPVNCISMSNDG---NCILASCLDSTLRLLDRSTGE-- 217 (277)
Q Consensus 158 ---------~~~~g~~d~~i~i~d~~~~~~----~--~~~~~~~v~~~~~s~~~---~~l~~~~~d~~i~~wd~~~~~-- 217 (277)
.+++|+.|++|++||++.++. . ...+...|++++|+|++ .+|++++.|++|++||+++..
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 699999999999999987542 1 22456789999999984 889999999999999997643
Q ss_pred e-EEEE--eccccceeeeeeEecCCCceEEeecCCCeEEEEECc
Q 023772 218 L-LQEY--KGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 218 ~-~~~~--~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~ 258 (277)
. ...+ ..| ......++++|++.+|++|+.|+.|++|+..
T Consensus 243 ~~~~~~~~~~~--~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 243 WKKTLLKEEKF--PDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CEEEESSSSCC--SSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred cceeeeecccC--CCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 1 1222 233 2345667899999999999999999999976
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=290.16 Aligned_cols=243 Identities=14% Similarity=0.225 Sum_probs=219.3
Q ss_pred ceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 023772 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST 91 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~ 91 (277)
..+.+|..+|.+++|++++.+++|++.|++|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.|++||+++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~ 153 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 153 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTT
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--eEEEeecCCcEE
Q 023772 92 GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVR 169 (277)
Q Consensus 92 ~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~d~~i~ 169 (277)
++....+..|...|.+++|+|++++|++++.|+.|++||+++. .....+..+...+.++.++++ .+++|+.|++|+
T Consensus 154 ~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 154 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG--KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 231 (321)
T ss_dssp CSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred CceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC--cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence 9999999999999999999999999999999999999999764 345556677777888877654 599999999999
Q ss_pred EEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeec
Q 023772 170 TFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS 247 (277)
Q Consensus 170 i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs 247 (277)
+||++.++.... .+...|.+++|+|++.+|++++.|++|++||+.+++++..+.+|... +..++++|++.+|++++
T Consensus 232 iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~--v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 232 IYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ--VWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEECTTSSEEEEEE
T ss_pred EEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCc--EEEEEECCCCCEEEEEe
Confidence 999987765433 35568999999999999999999999999999999999999988643 45677899999999999
Q ss_pred CCCeEEEEECc
Q 023772 248 EDGYIYFWDLV 258 (277)
Q Consensus 248 ~d~~i~iwd~~ 258 (277)
.||.|++||..
T Consensus 310 ~d~~i~vwd~p 320 (321)
T 3ow8_A 310 DDQEIHIYDCP 320 (321)
T ss_dssp TTCCEEEEECC
T ss_pred CCCeEEEEeCC
Confidence 99999999974
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.2e-43 Score=295.04 Aligned_cols=255 Identities=23% Similarity=0.426 Sum_probs=214.3
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCc------------------cEEEEEEcCCCCEEEE
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR------------------EVRDVHVTADNSKLIS 77 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~l~t 77 (277)
+|.+.|.+++|+|+|++|++|+ |+++++|++.+++.+..+..|.. .|++++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999976 68999999999988887765532 4999999999999999
Q ss_pred EeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC-
Q 023772 78 CGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK- 156 (277)
Q Consensus 78 ~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (277)
|+.|++|++||+++++++..+.+|...|.+++|+|+++++++++.|++|++||+++... ...+ .+...+..+.+.+
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC--SLTL-SIEDGVTTVAVSPG 217 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEE-ECSSCEEEEEECST
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee--EEEE-EcCCCcEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999986532 2222 2345566666654
Q ss_pred --CeEEEeecCCcEEEEEccCCcccc---------cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCC---------
Q 023772 157 --TEIIGGSVDGTVRTFDIRVGRELS---------DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG--------- 216 (277)
Q Consensus 157 --~~~~~g~~d~~i~i~d~~~~~~~~---------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~--------- 216 (277)
..+++|+.|+.|++||+++++.+. ..+...|.+++|+|+|++|++++.|+.|++||+++.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 569999999999999998775432 234568999999999999999999999999998753
Q ss_pred ---ceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 217 ---ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 217 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
.+...+.+|.. ....+++++++.+|++|+.|+.|++||..+++.+..+++|...|..+
T Consensus 298 ~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 298 NSGTCEVTYIGHKD--FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 358 (393)
T ss_dssp ---CEEEEEECCSS--CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCCcceEEEecccC--cEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEE
Confidence 34556677754 34567789999999999999999999999999999999998877543
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.4e-43 Score=290.90 Aligned_cols=256 Identities=16% Similarity=0.175 Sum_probs=208.6
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCC-----------CeeEEEEeccCccEEEEEEcCCCCEEEEEeCCC
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR-----------GIHIKTYKSHGREVRDVHVTADNSKLISCGGDR 82 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~ 82 (277)
...|++.|.+++|+|||++|++++ |+++|+||... .........|...|.+++|+++ ++|++|+.||
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg 103 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSG 103 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCC
Confidence 346888999999999999999887 77889987321 1111222345678999999998 5788999999
Q ss_pred cEEEEECCCCceeEE----eecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC-
Q 023772 83 QIFYWDVSTGRVIRK----FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT- 157 (277)
Q Consensus 83 ~v~~wd~~~~~~~~~----~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~- 157 (277)
+|++||+++++.+.. ..+|...|++++|+|++++|++|+.|++|++||+++. ..+..+..|...+..+.+++.
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~--~~~~~~~~h~~~V~~~~~~~~~ 181 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ--VVLSSYRAHAAQVTCVAASPHK 181 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECSSC
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--cEEEEEcCcCCceEEEEecCCC
Confidence 999999998876543 4589999999999999999999999999999999764 345667788899999888654
Q ss_pred --eEEEeecCCcEEEEEccCCccccc----CCCCCeeEEEEeCC-CCEEEEEecCCeEEEEECCCCceEEEEecccccee
Q 023772 158 --EIIGGSVDGTVRTFDIRVGRELSD----DLGQPVNCISMSND-GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSF 230 (277)
Q Consensus 158 --~~~~g~~d~~i~i~d~~~~~~~~~----~~~~~v~~~~~s~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 230 (277)
.+++++.|++|++||+++++.... .....+.+++|+|+ +++|++|+.|+.|++||+++++++..+.+|...
T Consensus 182 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~-- 259 (344)
T 4gqb_B 182 DSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQC-- 259 (344)
T ss_dssp TTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSC--
T ss_pred CCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCC--
Confidence 478999999999999998875433 23457899999995 567889999999999999999999999998654
Q ss_pred eeeeEecCCC-ceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 231 KTDCCLTNSD-AHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 231 ~~~~~~~~~~-~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
+..++|+|++ ++|++|+.|++|++||+.+++++ ++.+|...|..+
T Consensus 260 v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v 305 (344)
T 4gqb_B 260 VTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDA 305 (344)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEE
T ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEE
Confidence 4566789987 57999999999999999998765 578999888764
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=286.16 Aligned_cols=265 Identities=20% Similarity=0.288 Sum_probs=216.4
Q ss_pred ccceeeccCC-cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEE---EEeccCccEEEEEEcCCCCEEEEEeCCCcEE
Q 023772 10 EANVLKGHEG-AVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK---TYKSHGREVRDVHVTADNSKLISCGGDRQIF 85 (277)
Q Consensus 10 ~~~~l~~H~~-~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~---~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~ 85 (277)
....+.+|.+ +|.+++|+|+|++|+||+.|++|+|||..++.... ...+|...|.+++|+|++++|++|+.|++++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 4566789988 99999999999999999999999999998875432 2367999999999999999999999999999
Q ss_pred EEECCCC--ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCC-cceEeeccccCcEEEEEecCC--eEE
Q 023772 86 YWDVSTG--RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHST-EPIQIIDSFQDSVMSVCLTKT--EII 160 (277)
Q Consensus 86 ~wd~~~~--~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~ 160 (277)
+||+.++ +++..+.+|..+|.+++|+|++++|++|+.|++|++||++.... .....+..+...+..+.++++ .++
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE
Confidence 9999876 46788999999999999999999999999999999999976432 234456677888888887754 599
Q ss_pred EeecCCcEEEEEccCCccc----ccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCC---------------ceEEE
Q 023772 161 GGSVDGTVRTFDIRVGREL----SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG---------------ELLQE 221 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~---------------~~~~~ 221 (277)
+|+.|++|++||++.+... ...+...|++++|+|+|++|++++.|++|++||.... +++..
T Consensus 167 s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICT 246 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEE
Confidence 9999999999999876422 2345678999999999999999999999999996321 23344
Q ss_pred Eec-cccceeeeeeEecCCCceEEeecCCCeEEEEECcCccc---------eeeeccCcceeEee
Q 023772 222 YKG-HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV---------VAKFKAHSLVVKLL 276 (277)
Q Consensus 222 ~~~-~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~---------~~~~~~h~~~v~~~ 276 (277)
+.+ |. ..+..+++++++..+++++.|+.|++|+...+.. .+.+.+|...|..+
T Consensus 247 ~~~~h~--~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 309 (345)
T 3fm0_A 247 LSGFHS--RTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCV 309 (345)
T ss_dssp ECSSCS--SCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEE
T ss_pred ecCCCC--CcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEe
Confidence 444 32 2345677899999999999999999999876531 23345788777654
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.4e-42 Score=285.84 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=204.7
Q ss_pred ccceeeccCCcEEEEEE-----eC-CCCEEEEEeCCCcEEEEcCCC-------CeeEEEEeccCccEEEEEEcCCCCEEE
Q 023772 10 EANVLKGHEGAVLAARF-----NG-DGNYCLSCGKDRTIRLWNPHR-------GIHIKTYKSHGREVRDVHVTADNSKLI 76 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~-----~~-~~~~l~s~s~d~~v~iwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~ 76 (277)
....|.||.++|++++| ++ ++++|+||+.|++|++||+.+ +.+...+.+|...|.+++|+|++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 35678999999999999 66 899999999999999999864 345678899999999999999999999
Q ss_pred EEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC
Q 023772 77 SCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK 156 (277)
Q Consensus 77 t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (277)
+|+.|++|++||+++++++..+.+|..+|.+++|+|+++++++++.|++|++||+.............+...+..+.+++
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECC
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999986321111111124566777777765
Q ss_pred ------------CeEEEeecCCcEEEEEccCCcc-cccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECC-CCceEEEE
Q 023772 157 ------------TEIIGGSVDGTVRTFDIRVGRE-LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRS-TGELLQEY 222 (277)
Q Consensus 157 ------------~~~~~g~~d~~i~i~d~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~ 222 (277)
..+++++.|+.|++||...... ....+...|++++|+|+|++|++|+.|+.|++||+. .......+
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~ 252 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF 252 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEE
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceee
Confidence 3589999999999999543221 123456789999999999999999999999999994 44444444
Q ss_pred eccccceeeeeeEecCCCceEEeecCCCeEEEEECcCcccee
Q 023772 223 KGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVA 264 (277)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~ 264 (277)
... .....++++|++.++++| .|+.|++||+.+++...
T Consensus 253 ~~~---~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 253 DAG---STINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp ECS---SCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCS
T ss_pred cCC---CcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCc
Confidence 322 124567889999888765 57789999999877654
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.5e-42 Score=283.95 Aligned_cols=241 Identities=22% Similarity=0.378 Sum_probs=213.0
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC----eeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEE
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG----IHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFY 86 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~ 86 (277)
...+..|...|.+++|+|++++|++|+.|+.+++||+.++ .....+.+|.+.|.++.|++++ .+++++.|++|++
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~ 168 (340)
T 1got_B 90 VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCAL 168 (340)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEE
T ss_pred ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEE
Confidence 4556789999999999999999999999999999998765 4567788999999999999876 5899999999999
Q ss_pred EECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeec
Q 023772 87 WDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSV 164 (277)
Q Consensus 87 wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~ 164 (277)
||+++++++.++.+|..+|.+++|+|+++++++|+.|++|++||++... ....+..|...+.++.+++ ..+++|+.
T Consensus 169 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM--CRQTFTGHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS--EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe--eEEEEcCCcCCEEEEEEcCCCCEEEEEcC
Confidence 9999999999999999999999999999999999999999999997643 4556677888888888875 45999999
Q ss_pred CCcEEEEEccCCcccccC----CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCC
Q 023772 165 DGTVRTFDIRVGRELSDD----LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSD 240 (277)
Q Consensus 165 d~~i~i~d~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
|++|++||++.++.+... ....+.+++|+|+|++|++|+.|+.|++||..+++.+..+.+|... +..++++|++
T Consensus 247 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~--v~~~~~s~dg 324 (340)
T 1got_B 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR--VSCLGVTDDG 324 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECTTS
T ss_pred CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCc--EEEEEEcCCC
Confidence 999999999987654321 2246999999999999999999999999999999999999998654 4566789999
Q ss_pred ceEEeecCCCeEEEEE
Q 023772 241 AHVTGGSEDGYIYFWD 256 (277)
Q Consensus 241 ~~l~sgs~d~~i~iwd 256 (277)
.+|++|+.|+.|++||
T Consensus 325 ~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 325 MAVATGSWDSFLKIWN 340 (340)
T ss_dssp SCEEEEETTSCEEEEC
T ss_pred CEEEEEcCCccEEecC
Confidence 9999999999999997
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.3e-42 Score=287.51 Aligned_cols=247 Identities=19% Similarity=0.243 Sum_probs=200.0
Q ss_pred ceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeE----EEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 023772 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI----KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYW 87 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~----~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~w 87 (277)
....+|.+.|.+++|+|++. +++++.||+|+|||+.+++.. ....+|...|++++|+|++++|++|+.|++|++|
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp SEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred cccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 34467999999999999975 557889999999999887643 2345799999999999999999999999999999
Q ss_pred ECCCCceeEEeecccCceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC---eEEEee
Q 023772 88 DVSTGRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT---EIIGGS 163 (277)
Q Consensus 88 d~~~~~~~~~~~~h~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~ 163 (277)
|+++++++..+.+|...|++++|++++. ++++++.|++|++||++............+...+.++.+++. .+++|+
T Consensus 167 d~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 9999999999999999999999999874 789999999999999987654444444455667888887653 488999
Q ss_pred cCCcEEEEEccCCccccc--CCCCCeeEEEEeCCC-CEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecC-C
Q 023772 164 VDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDG-NCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN-S 239 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (277)
.|+.|++||+++++.+.. .+...|++++|+|++ ++|++|+.|++|++||++++++++.+ +|.. .+..++|+| +
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~--~V~~vafsP~d 323 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRD--FVTGVAWSPLD 323 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSS--CEEEEEECSSS
T ss_pred cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCC--CEEEEEEeCCC
Confidence 999999999998776543 355789999999987 57899999999999999999887654 5643 356678898 7
Q ss_pred CceEEeecCCCeEEEEECcCccc
Q 023772 240 DAHVTGGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 240 ~~~l~sgs~d~~i~iwd~~~~~~ 262 (277)
+.+|++|+.||+|++||+.+...
T Consensus 324 ~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 324 HSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp TTEEEEEETTSCEEEEECC----
T ss_pred CCEEEEEcCCCeEEEEECCCCCc
Confidence 89999999999999999976433
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.4e-42 Score=287.44 Aligned_cols=257 Identities=15% Similarity=0.177 Sum_probs=206.2
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeC------CCcEEEEcCCCCee----EEEEeccCccEEEEEEcCCCCEEEEEeCCCc
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGK------DRTIRLWNPHRGIH----IKTYKSHGREVRDVHVTADNSKLISCGGDRQ 83 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~------d~~v~iwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~ 83 (277)
..+|++.|++++|+|||++|+|||. |+.+++|+..++.. .....+|...|.+++|+|++ .+++++.|++
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~ 116 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASDSGA 116 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEETTSC
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEECCCE
Confidence 3579999999999999999999998 78899999876543 23455688899999999986 5667889999
Q ss_pred EEEEECCCCceeE----EeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--
Q 023772 84 IFYWDVSTGRVIR----KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-- 157 (277)
Q Consensus 84 v~~wd~~~~~~~~----~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (277)
|++||+.+++... ...+|..+|.+++|+|++++|++++.|++|++||+++. .....+..|...+..+.+.+.
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~--~~~~~~~~h~~~v~~v~~s~~~~ 194 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK--AVLKSYNAHSSEVNCVAACPGKD 194 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTCS
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--cEEEEEcCCCCCEEEEEEccCCC
Confidence 9999998876432 34579999999999999999999999999999998764 345566778888988888643
Q ss_pred -eEEEeecCCcEEEEEccCCccccc----CCCCCeeEEEEeCC-CCEEEEEecCCeEEEEECCCCceEEEEeccccceee
Q 023772 158 -EIIGGSVDGTVRTFDIRVGRELSD----DLGQPVNCISMSND-GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFK 231 (277)
Q Consensus 158 -~~~~g~~d~~i~i~d~~~~~~~~~----~~~~~v~~~~~s~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 231 (277)
.+++++.|++|++||+++++.... .....+.+++|+|+ +.+|++|+.|+.|++||++++++++.+.+|... +
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~--v 272 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN--I 272 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC--E
T ss_pred ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee--E
Confidence 488999999999999998765432 23457999999997 467889999999999999999999999888644 4
Q ss_pred eeeEecCCC-ceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 232 TDCCLTNSD-AHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 232 ~~~~~~~~~-~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
..++++|++ ++|++|+.|++|++||+++++++..+ +|...|+.+
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~v 317 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGV 317 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEE
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEE
Confidence 556788876 67999999999999999999887655 798888764
No 20
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.1e-41 Score=275.74 Aligned_cols=247 Identities=19% Similarity=0.275 Sum_probs=207.1
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
....+.+|..+|.+++|+|++++|++|+.|++|++||+.+++.+..+++|...|.+++|+|++++|++|+.|++|++||+
T Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-ceeEEeecccCceeEEEEec-CCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEec----CCeEEEee
Q 023772 90 STG-RVIRKFRGHESEVNAVKFNE-YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT----KTEIIGGS 163 (277)
Q Consensus 90 ~~~-~~~~~~~~h~~~v~~i~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~ 163 (277)
+++ .+...+.+|...|.+++|+| ++.++++|+.|++|++||++..... ......+...+..+.+. +..+++|+
T Consensus 127 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s 205 (304)
T 2ynn_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN-FTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (304)
T ss_dssp GGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS-EEEECCCTTCEEEEEECCSTTCCEEEEEE
T ss_pred CCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc-ceeccCCcCcEEEEEEEEcCCCCEEEEEc
Confidence 887 55677899999999999999 5789999999999999999765432 22233444556666554 34699999
Q ss_pred cCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCc
Q 023772 164 VDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA 241 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (277)
.|++|++||+++++.+.. .+...|.+++|+|++.+|++|+.|++|++||.+++++++.+..|.... ..++++|++.
T Consensus 206 ~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 283 (304)
T 2ynn_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERS--WCIATHPTGR 283 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSE--EEEEECTTCG
T ss_pred CCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccE--EEEEECCCCC
Confidence 999999999998876543 456789999999999999999999999999999999999998775433 3455667664
Q ss_pred --eEEeecCCCeEEEEECcCc
Q 023772 242 --HVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 242 --~l~sgs~d~~i~iwd~~~~ 260 (277)
++++|+.|| +.+|++.+.
T Consensus 284 ~~~~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 284 KNYIASGFDNG-FTVLSLGND 303 (304)
T ss_dssp GGCEEEEETTE-EEEEECC--
T ss_pred ceEEEEecCCc-eEEEEeccC
Confidence 588887665 668887653
No 21
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.7e-43 Score=286.48 Aligned_cols=259 Identities=14% Similarity=0.197 Sum_probs=198.5
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe--eEEEEeccCccEEEEEEcC--CCCEEEEEeCCCcEEE
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI--HIKTYKSHGREVRDVHVTA--DNSKLISCGGDRQIFY 86 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~--~~~~l~t~s~d~~v~~ 86 (277)
..++.+|+++|.+++|+|+|++|+||+.|++|++||+.++. .+..+.+|.++|++++|++ ++++|++|+.|++|++
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 44678999999999999999999999999999999998764 4678999999999999986 4789999999999999
Q ss_pred EECCCC--ceeEEeecccCceeEEEEecC--CCEEEEEeCCCcEEEEeCccCCCc-ceEeeccccCcEEEEEecC-----
Q 023772 87 WDVSTG--RVIRKFRGHESEVNAVKFNEY--SSVVVSAGYDQSLRAWDCRSHSTE-PIQIIDSFQDSVMSVCLTK----- 156 (277)
Q Consensus 87 wd~~~~--~~~~~~~~h~~~v~~i~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~----- 156 (277)
||++++ +....+.+|...|++++|+|+ +.+|++|+.|++|++||++..... .......|...+..+.+++
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 999887 456778899999999999998 789999999999999998754211 1223344555565555554
Q ss_pred --------------CeEEEeecCCcEEEEEccCCc---cc--ccCCCCCeeEEEEeCCC----CEEEEEecCCeEEEEEC
Q 023772 157 --------------TEIIGGSVDGTVRTFDIRVGR---EL--SDDLGQPVNCISMSNDG----NCILASCLDSTLRLLDR 213 (277)
Q Consensus 157 --------------~~~~~g~~d~~i~i~d~~~~~---~~--~~~~~~~v~~~~~s~~~----~~l~~~~~d~~i~~wd~ 213 (277)
..+++|+.|++|++||++... .. ...+...|++++|+|++ ++|++++.|++|++||+
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 368999999999999997542 22 22456689999999986 78999999999999998
Q ss_pred CCC---c-eEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcC-c--cceeeeccCcc
Q 023772 214 STG---E-LLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD-A--SVVAKFKAHSL 271 (277)
Q Consensus 214 ~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~-~--~~~~~~~~h~~ 271 (277)
.+. . ....+..|. .....++++|++.+|++|+.|+.|++|+... + .++..+...++
T Consensus 246 ~~~~~~~~~~~~~~~~~--~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~~~~ 308 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFN--DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQG 308 (316)
T ss_dssp SSTTCCCCBCCEEEECS--SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC----
T ss_pred cCccccchhhhhhhcCC--CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccCCCC
Confidence 762 1 122344453 3345678999999999999999999999763 3 44555654443
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-41 Score=301.13 Aligned_cols=261 Identities=18% Similarity=0.298 Sum_probs=219.1
Q ss_pred cccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC--eeEEEEeccCccEEEEEEcCCCCEEEEEeCC----C
Q 023772 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG--IHIKTYKSHGREVRDVHVTADNSKLISCGGD----R 82 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d----~ 82 (277)
.....+.+|.+.|.+++|+|+|++|+||+.|++|||||+.++ .....+.+|.++|.+++|+|++++|++++.+ +
T Consensus 50 ~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~ 129 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 129 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSE
T ss_pred ccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCcee
Confidence 345668899999999999999999999999999999998654 3456788999999999999999999998875 4
Q ss_pred cEEEEECCCCceeEEeecccCceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--eE
Q 023772 83 QIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EI 159 (277)
Q Consensus 83 ~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 159 (277)
.|++|| +++...++.+|...|++++|+|++. .+++++.|++|++||.... +....+..|...+.++.++++ .+
T Consensus 130 ~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~--~~~~~l~~H~~~V~~v~fspdg~~l 205 (611)
T 1nr0_A 130 HVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--KFKSTFGEHTKFVHSVRYNPDGSLF 205 (611)
T ss_dssp EEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--EEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC--eEeeeeccccCceEEEEECCCCCEE
Confidence 788887 4667778899999999999999986 6999999999999997653 334567788889999988764 59
Q ss_pred EEeecCCcEEEEEccCCccccc---------CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe-------
Q 023772 160 IGGSVDGTVRTFDIRVGRELSD---------DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK------- 223 (277)
Q Consensus 160 ~~g~~d~~i~i~d~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~------- 223 (277)
++|+.|++|++||+.+++.... .+...|.+++|+|+|++|++++.|++|++||+.+++++..+.
T Consensus 206 as~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~ 285 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 285 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGG
T ss_pred EEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccc
Confidence 9999999999999987754321 356789999999999999999999999999999887765543
Q ss_pred ------------------------------------ccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeee-
Q 023772 224 ------------------------------------GHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKF- 266 (277)
Q Consensus 224 ------------------------------------~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~- 266 (277)
+|. .....++++|++++|++|+.|+.|++||+.++++...+
T Consensus 286 ~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~--~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~ 363 (611)
T 1nr0_A 286 QQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHN--KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP 363 (611)
T ss_dssp CEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSS
T ss_pred eeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCC--CCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecc
Confidence 332 23456788999999999999999999999999887766
Q ss_pred ccCcceeEe
Q 023772 267 KAHSLVVKL 275 (277)
Q Consensus 267 ~~h~~~v~~ 275 (277)
.+|...|..
T Consensus 364 ~~h~~~v~~ 372 (611)
T 1nr0_A 364 DVHATMITG 372 (611)
T ss_dssp CSCSSCEEE
T ss_pred cCCcceEEE
Confidence 467766543
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=281.80 Aligned_cols=252 Identities=18% Similarity=0.319 Sum_probs=204.7
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC--eeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG--IHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST 91 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~ 91 (277)
..+|.++|.+++|+|+|++|++|+.|+++++||..++ +++..+.+|..+|.+++|+|++++|++|+.|++|++||+.+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 4689999999999999999999999999999998766 45788999999999999999999999999999999999987
Q ss_pred C---ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--eEEEeecCC
Q 023772 92 G---RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDG 166 (277)
Q Consensus 92 ~---~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~d~ 166 (277)
+ +++..+..|...|.+++|+|++++|++++.|++|++||.+.........+..|...+.++.++++ .+++|+.|+
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 6 34667889999999999999999999999999999999876543444567788889999888764 599999999
Q ss_pred cEEEEEccCCccc------------------ccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCc----eE-----
Q 023772 167 TVRTFDIRVGREL------------------SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGE----LL----- 219 (277)
Q Consensus 167 ~i~i~d~~~~~~~------------------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~----~~----- 219 (277)
+|++||....... ...+...|.+++|+|++..|++++.|+.|++|+...+. ..
T Consensus 217 ~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~ 296 (345)
T 3fm0_A 217 TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTA 296 (345)
T ss_dssp CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEE
T ss_pred eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEe
Confidence 9999997532110 11245679999999999999999999999999986542 11
Q ss_pred EEEeccccceeeeeeEecCCC-ceEEeecCCCeEEEEECcCccceeeec
Q 023772 220 QEYKGHICKSFKTDCCLTNSD-AHVTGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~-~~l~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
..+.+|.. .+..++++|++ .+|++|+.||.|++|++.+++....+.
T Consensus 297 ~~~~~h~~--~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 297 HLHQAHSQ--DVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp EETTSSSS--CEEEEEECSSSTTEEEEEETTSCEEEEEECC--------
T ss_pred eecccccC--cEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccccc
Confidence 11234543 35667789987 589999999999999999987765554
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-41 Score=276.62 Aligned_cols=261 Identities=18% Similarity=0.205 Sum_probs=204.5
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC--eeEEEE-ec-cCccEEEEEEcCCCCEEEEEeCCCcEE
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG--IHIKTY-KS-HGREVRDVHVTADNSKLISCGGDRQIF 85 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~-~~-h~~~v~~~~~~~~~~~l~t~s~d~~v~ 85 (277)
....+.+|.++|.+++|+++ +|++|+.|++|++||+.++ .....+ .. |..+|.+++|+|++++|++|+.|++|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 35678999999999999987 9999999999999999875 445556 34 999999999999999999999999999
Q ss_pred EEECCC-------CceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCC--CcceEeeccccCcEEEEEecC
Q 023772 86 YWDVST-------GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS--TEPIQIIDSFQDSVMSVCLTK 156 (277)
Q Consensus 86 ~wd~~~-------~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~ 156 (277)
+||++. .+++..+.+|..+|.+++|+|++++|++|+.|++|++||++... .+....+..|...+..+.+++
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 999853 35677889999999999999999999999999999999985322 233455677888898888875
Q ss_pred --CeEEEeecCCcEEEEEccCC--ccc--ccCCCCCeeEEEEeCC--CCEEEEEecCCeEEEEECCCC--------ceEE
Q 023772 157 --TEIIGGSVDGTVRTFDIRVG--REL--SDDLGQPVNCISMSND--GNCILASCLDSTLRLLDRSTG--------ELLQ 220 (277)
Q Consensus 157 --~~~~~g~~d~~i~i~d~~~~--~~~--~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~~wd~~~~--------~~~~ 220 (277)
..+++|+.|++|++||.+.+ +.+ ...+...|.+++|+|+ +.+|++++.|++|++||+..+ .+..
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEee
Confidence 45999999999999998765 222 2345678999999998 778999999999999998654 3344
Q ss_pred EEec-cccceeeeeeEecCCCceEEeecCCCeEEEEECcCcc--cee-eeccCcc-eeEe
Q 023772 221 EYKG-HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDAS--VVA-KFKAHSL-VVKL 275 (277)
Q Consensus 221 ~~~~-~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~--~~~-~~~~h~~-~v~~ 275 (277)
.+.+ |.. ....++++++ .++++|+.||.|++||..+++ ... .+.+|.. .|..
T Consensus 244 ~~~~~h~~--~v~~v~~s~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~ 300 (330)
T 2hes_X 244 ILPDVHKR--QVYNVAWGFN-GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINV 300 (330)
T ss_dssp ECCSCCSS--CEEEEEECTT-SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEE
T ss_pred eccccccc--ceEEEEEcCC-CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEE
Confidence 4443 533 3455667754 489999999999999998874 333 3457765 5543
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.3e-41 Score=300.24 Aligned_cols=263 Identities=17% Similarity=0.288 Sum_probs=217.8
Q ss_pred cceeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 11 ANVLKGHEGAVLAARFNGDGN-YCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
...+.+|.++|++++|+|++. .|+||+.|++|++||..++++..++.+|...|++++|+|++++|++++.|++|++||+
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 345789999999999999987 5999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEee-------cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc-------------------------
Q 023772 90 STGRVIRKFR-------GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE------------------------- 137 (277)
Q Consensus 90 ~~~~~~~~~~-------~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~------------------------- 137 (277)
.+++++..+. +|...|.+++|+|++++|++++.|++|++||+++....
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 9999888884 79999999999999999999999999999998753211
Q ss_pred ----------------ceEeeccccCcEEEEEecC--CeEEEeecCCcEEEEEccCCccccc------------------
Q 023772 138 ----------------PIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELSD------------------ 181 (277)
Q Consensus 138 ----------------~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i~i~d~~~~~~~~~------------------ 181 (277)
....+..|...+.++.+++ ..+++++.|++|++||+.+++....
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC
Confidence 1122345677788888765 4599999999999999875432100
Q ss_pred ------------------------------------------------------------------CCCCCeeEEEEeCC
Q 023772 182 ------------------------------------------------------------------DLGQPVNCISMSND 195 (277)
Q Consensus 182 ------------------------------------------------------------------~~~~~v~~~~~s~~ 195 (277)
.+...+.+++|+|+
T Consensus 380 ~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd 459 (611)
T 1nr0_A 380 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND 459 (611)
T ss_dssp CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT
T ss_pred cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC
Confidence 00124678999999
Q ss_pred CCEEEEEecCCeEEEEECCCCce--EEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcC-ccceee--eccCc
Q 023772 196 GNCILASCLDSTLRLLDRSTGEL--LQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD-ASVVAK--FKAHS 270 (277)
Q Consensus 196 ~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~-~~~~~~--~~~h~ 270 (277)
|++|++|+.|++|++||+..++. +.. .+|. ..+..++|+|++++|++++.|++|++||+.+ ++++.. +.+|.
T Consensus 460 g~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~--~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~ 536 (611)
T 1nr0_A 460 KQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHP--AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHT 536 (611)
T ss_dssp SCEEEEEETTSEEEEEEEETTEEEEEEE-EECS--SCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCS
T ss_pred CCEEEEeCCCCeEEEEEccCCceeeeec-cCCC--CceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecc
Confidence 99999999999999999987654 233 4554 3456678999999999999999999999998 666654 34598
Q ss_pred ceeEee
Q 023772 271 LVVKLL 276 (277)
Q Consensus 271 ~~v~~~ 276 (277)
..|..+
T Consensus 537 ~~V~~v 542 (611)
T 1nr0_A 537 AKVACV 542 (611)
T ss_dssp SCEEEE
T ss_pred cceeEE
Confidence 877654
No 26
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-41 Score=279.04 Aligned_cols=242 Identities=20% Similarity=0.343 Sum_probs=193.2
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCC-------CeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR-------GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
+|.++|.+++|+|++++|++|+.|++|++||... .+.+..+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 3999999999999999999999999999999842 356778899999999999999999999999999999999
Q ss_pred CCC----CceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC----eEE
Q 023772 89 VST----GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT----EII 160 (277)
Q Consensus 89 ~~~----~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 160 (277)
+.. .+++..+.+|...|.++.|+|++++|++++.|++|++||.+....+....+..|...+..+.+++. .++
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 943 256778899999999999999999999999999999999875433456667788889999998875 489
Q ss_pred EeecCCcEEEEEccCCc--------cc---ccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCc--eEEE-Eeccc
Q 023772 161 GGSVDGTVRTFDIRVGR--------EL---SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGE--LLQE-YKGHI 226 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~~--------~~---~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~--~~~~-~~~~~ 226 (277)
+|+.|++|++||++.+. .. ...+...|.+++|++++ +|++++.|+.|++||..+++ .... +.+|.
T Consensus 216 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~ 294 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHG 294 (330)
T ss_dssp EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTT
T ss_pred EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccc
Confidence 99999999999997542 11 11256789999999766 78999999999999998764 2322 24453
Q ss_pred cceeeeeeEecC--CCceEEeecCCCeEEEEECcC
Q 023772 227 CKSFKTDCCLTN--SDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 227 ~~~~~~~~~~~~--~~~~l~sgs~d~~i~iwd~~~ 259 (277)
.. ....++++| ++.+|++|+.||.|++||+++
T Consensus 295 ~~-~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 295 VY-EINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TS-CEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cc-eEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 21 234456777 688999999999999999875
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.3e-41 Score=277.52 Aligned_cols=242 Identities=21% Similarity=0.331 Sum_probs=212.0
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC------eeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcE
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG------IHIKTYKSHGREVRDVHVTADNSKLISCGGDRQI 84 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v 84 (277)
...+..|...|.+++|+|+|.++++++.|+.+++|++... .....+..|...|.++.|+|++..|++++.|++|
T Consensus 99 ~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v 178 (354)
T 2pbi_B 99 EHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTC 178 (354)
T ss_dssp EEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred ceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcE
Confidence 4456789999999999999999999999999999987542 3456778899999999999999999999999999
Q ss_pred EEEECCCCceeEEeecccCceeEEEEec--CCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEE
Q 023772 85 FYWDVSTGRVIRKFRGHESEVNAVKFNE--YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEII 160 (277)
Q Consensus 85 ~~wd~~~~~~~~~~~~h~~~v~~i~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 160 (277)
++||+++++++.++.+|...|.++++.| ++++|++|+.||+|++||+++.. ....+..|...+.++.+++ ..++
T Consensus 179 ~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~ 256 (354)
T 2pbi_B 179 ALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ--CVQAFETHESDVNSVRYYPSGDAFA 256 (354)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCCCCCeEEEEEeCCCCEEE
Confidence 9999999999999999999999999987 46899999999999999998653 4556677888898888865 5699
Q ss_pred EeecCCcEEEEEccCCcccccC----CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEe
Q 023772 161 GGSVDGTVRTFDIRVGRELSDD----LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCL 236 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 236 (277)
+|+.|++|++||++..+.+... ....+.+++|+|++.+|++|+.|+.|++||+.+++.+..+.+|... +..+++
T Consensus 257 s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~--v~~l~~ 334 (354)
T 2pbi_B 257 SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENR--VSTLRV 334 (354)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC--EEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCc--EEEEEE
Confidence 9999999999999887654321 2246889999999999999999999999999999999999888643 466789
Q ss_pred cCCCceEEeecCCCeEEEEE
Q 023772 237 TNSDAHVTGGSEDGYIYFWD 256 (277)
Q Consensus 237 ~~~~~~l~sgs~d~~i~iwd 256 (277)
+|++.+|++|+.|+.|++|+
T Consensus 335 spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 335 SPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSCEEEEETTSEEEEEC
T ss_pred CCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999996
No 28
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8e-40 Score=269.35 Aligned_cols=252 Identities=23% Similarity=0.365 Sum_probs=212.7
Q ss_pred cceeeccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEcCCCC-----eeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcE
Q 023772 11 ANVLKGHEGAVLAARFNGD-GNYCLSCGKDRTIRLWNPHRG-----IHIKTYKSHGREVRDVHVTADNSKLISCGGDRQI 84 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~-~~~l~s~s~d~~v~iwd~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v 84 (277)
..+|+||.++|++++|+|+ +++|+|||.|++|+|||+.++ .+...+.+|...|.+++|+|++++|++++.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3468999999999999997 689999999999999997653 4567889999999999999999999999999999
Q ss_pred EEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC----eEE
Q 023772 85 FYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT----EII 160 (277)
Q Consensus 85 ~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 160 (277)
++|+............+...+..+.+.++++.+++++.|+.+++||..... ........+...+..+.+.+. .++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC-KYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc-eEEEEeccccCcccceEEccCCCCcEEE
Confidence 999999999888888899999999999999999999999999999986532 223334456667777766532 378
Q ss_pred EeecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecC
Q 023772 161 GGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (277)
+++.|+.|++||++.++.... .+..+|++++|+|++++|++|+.|+.|++||+++.+++..+.++. ....++++|
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~---~v~~~~~~~ 266 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD---IINALCFSP 266 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS---CEEEEEECS
T ss_pred EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc---eEEeeecCC
Confidence 899999999999998775543 356789999999999999999999999999999999998887663 345566788
Q ss_pred CCceEEeecCCCeEEEEECcCccceeeec
Q 023772 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 239 ~~~~l~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
++.+ ++++.|+.|++||++++.++..++
T Consensus 267 ~~~~-~~~~~d~~i~iwd~~~~~~~~~~~ 294 (340)
T 4aow_A 267 NRYW-LCAATGPSIKIWDLEGKIIVDELK 294 (340)
T ss_dssp SSSE-EEEEETTEEEEEETTTTEEEEEEC
T ss_pred CCce-eeccCCCEEEEEECCCCeEEEecc
Confidence 7654 556679999999999988777665
No 29
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-40 Score=277.65 Aligned_cols=250 Identities=17% Similarity=0.228 Sum_probs=213.1
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCC--CCeeEEEEeccCccEEEEEEcCC--CCEEEEEeCCCcEEE
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPH--RGIHIKTYKSHGREVRDVHVTAD--NSKLISCGGDRQIFY 86 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~t~s~d~~v~~ 86 (277)
..++.+|.++|++++|+|++++|++|+.|+.|++||+. +++....+.+|..+|++++|+++ +++|++++.|+.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 45789999999999999999999999999999999987 56777889999999999999977 899999999999999
Q ss_pred EECCCCc--eeEEeecccCceeEEEEecC--CCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC------
Q 023772 87 WDVSTGR--VIRKFRGHESEVNAVKFNEY--SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK------ 156 (277)
Q Consensus 87 wd~~~~~--~~~~~~~h~~~v~~i~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------ 156 (277)
||+.+++ .+..+..|...|.+++|+|+ +.++++++.|+.|++||++.........+..+...+..+.+.+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 9999987 77788889999999999999 9999999999999999998765555556677888888888875
Q ss_pred ---------CeEEEeecCCcEEEEEccCCccc------ccCCCCCeeEEEEeCC---CCEEEEEecCCeEEEEECCCCc-
Q 023772 157 ---------TEIIGGSVDGTVRTFDIRVGREL------SDDLGQPVNCISMSND---GNCILASCLDSTLRLLDRSTGE- 217 (277)
Q Consensus 157 ---------~~~~~g~~d~~i~i~d~~~~~~~------~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~~wd~~~~~- 217 (277)
..+++++.|+.|++||++.+... ...+..+|.+++|+|+ +++|++++.|+.|++||++++.
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~ 243 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 243 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence 45999999999999999876422 1235678999999999 8999999999999999998764
Q ss_pred --eEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCc
Q 023772 218 --LLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~ 260 (277)
....+...........++++|++.+|++++.||.|++||+..+
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 244 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred cceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 2222222112334566789999999999999999999999854
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.7e-40 Score=273.55 Aligned_cols=244 Identities=20% Similarity=0.334 Sum_probs=201.6
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.++|.+++|+|++.+++||+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCceeEEee---cccCceeEEEEecCC----------CEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC
Q 023772 91 TGRVIRKFR---GHESEVNAVKFNEYS----------SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT 157 (277)
Q Consensus 91 ~~~~~~~~~---~h~~~v~~i~~~~~~----------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (277)
.. ...... .|...|.++.|+|++ .++++++.|++|++||.. ......+..|...+..+.++++
T Consensus 149 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 149 GE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN---FQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp SC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT---TEEEEEEECCSSCEEEEEECTT
T ss_pred CC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC---CceeEEEcCccccceEEEECCC
Confidence 43 333333 788999999999986 789999999999999943 2334456677888888888754
Q ss_pred --eEEEeecCCcEEEEEccCCcc-ccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEE--EEe--------
Q 023772 158 --EIIGGSVDGTVRTFDIRVGRE-LSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ--EYK-------- 223 (277)
Q Consensus 158 --~~~~g~~d~~i~i~d~~~~~~-~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~--~~~-------- 223 (277)
.+++|+.|+.|++||++.... ... .....|++++|+|++.+++ ++.|+.+++||+.+++... .+.
T Consensus 225 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAE 303 (343)
T ss_dssp SSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBT
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhh
Confidence 599999999999999954332 211 2456799999999998765 5568889999998766543 333
Q ss_pred ---ccccceeeeeeEecCCCceEEeecCCCeEEEEECcCcc
Q 023772 224 ---GHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDAS 261 (277)
Q Consensus 224 ---~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~ 261 (277)
+|. .....++++|++.+|++|+.||.|++|+++++.
T Consensus 304 ~~~~~~--~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 304 GQKGKN--PQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp TBCCSC--CCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred hhcCCC--CceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 232 234567899999999999999999999998763
No 31
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.1e-40 Score=273.22 Aligned_cols=259 Identities=9% Similarity=0.108 Sum_probs=223.8
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe---eEEEEeccCccEEEEEEcCCCC-EEEEEeCCCcEEEEE
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI---HIKTYKSHGREVRDVHVTADNS-KLISCGGDRQIFYWD 88 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~d~~v~~wd 88 (277)
+..+|.++|.+++|+|++++|++++.|+.|++||+.++. ....+..|...|.+++|+|+++ +|++++.|+.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 446899999999999999999999999999999988766 3556668999999999999999 999999999999999
Q ss_pred C-CCCceeEEeec--ccCceeEEEEecCCCEEEEEeCCCcEEEEeCcc---------CCCcceEeeccccCcEEEEEecC
Q 023772 89 V-STGRVIRKFRG--HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS---------HSTEPIQIIDSFQDSVMSVCLTK 156 (277)
Q Consensus 89 ~-~~~~~~~~~~~--h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 156 (277)
+ ++++. ..+.. |...|.+++|+| ++++++++.|+.|++||++. ... ...+. +...+..+.+++
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN--SNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC--SSSSS-SCCCEEEEEECS
T ss_pred eccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe--eeEEe-eCCceEEEEecC
Confidence 9 87765 67888 999999999999 99999999999999999875 332 22223 677889999999
Q ss_pred CeEEEeecCCcEEEEEccC-Ccc----cccCCCCCeeEEEEeC-CCCEEEEEecCCeEEEEECCCC------ceEEEEec
Q 023772 157 TEIIGGSVDGTVRTFDIRV-GRE----LSDDLGQPVNCISMSN-DGNCILASCLDSTLRLLDRSTG------ELLQEYKG 224 (277)
Q Consensus 157 ~~~~~g~~d~~i~i~d~~~-~~~----~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~wd~~~~------~~~~~~~~ 224 (277)
+.+++++.|+.|++||++. +.. ....+...+.+++|+| +++++++++.||.+++|++... +....+..
T Consensus 161 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 240 (342)
T 1yfq_A 161 SRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC 240 (342)
T ss_dssp SEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC
T ss_pred CcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeec
Confidence 9999999999999999987 442 2234566899999999 9999999999999999999876 77778887
Q ss_pred ccc-------ceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccC-cceeEee
Q 023772 225 HIC-------KSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH-SLVVKLL 276 (277)
Q Consensus 225 ~~~-------~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~ 276 (277)
|.. ......++++|++++|++|+.||.|++||+.+++++..+++| ...|..+
T Consensus 241 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~ 300 (342)
T 1yfq_A 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKI 300 (342)
T ss_dssp CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEE
T ss_pred ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEe
Confidence 743 124566789999999999999999999999999999999998 8888764
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.8e-40 Score=276.96 Aligned_cols=239 Identities=21% Similarity=0.353 Sum_probs=200.5
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF 98 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~ 98 (277)
..|.+++|+|+|++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred ecccCceeEEEEec-CCCEEEEEeCCCcEEEEeCccCCCcceE-----eeccccCcEEEEEecC--CeEEEeecCCcEEE
Q 023772 99 RGHESEVNAVKFNE-YSSVVVSAGYDQSLRAWDCRSHSTEPIQ-----IIDSFQDSVMSVCLTK--TEIIGGSVDGTVRT 170 (277)
Q Consensus 99 ~~h~~~v~~i~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~g~~d~~i~i 170 (277)
. +...+.+++++| +++++++|+.|++|++||++........ ....|...+.++.+++ ..+++|+.|++|++
T Consensus 204 ~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 204 S-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp E-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred E-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 6 567899999999 8999999999999999998764321111 1135677888888865 45999999999999
Q ss_pred EEccCCccc--------------ccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEe
Q 023772 171 FDIRVGREL--------------SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCL 236 (277)
Q Consensus 171 ~d~~~~~~~--------------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 236 (277)
||++..... ...+...|.+++|+|++.+|++|+.|+.|++||.++++++..+.+|..... .+++
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~--~v~~ 360 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI--SVAV 360 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE--EEEE
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEE--EEEe
Confidence 999764321 113456799999999999999999999999999999999999999865443 3344
Q ss_pred c------CCCceEEeecCCCeEEEEECcCc
Q 023772 237 T------NSDAHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 237 ~------~~~~~l~sgs~d~~i~iwd~~~~ 260 (277)
+ |++.++++|+.||.|++|++.+.
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 4 47889999999999999998654
No 33
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-39 Score=268.22 Aligned_cols=262 Identities=20% Similarity=0.331 Sum_probs=226.7
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.++|++++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEeCC-----CcEEEEeCccCCCc---------ceEeeccccC--cEEEEEe
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD-----QSLRAWDCRSHSTE---------PIQIIDSFQD--SVMSVCL 154 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~---------~~~~~~~~~~--~~~~~~~ 154 (277)
+++++..+. |..+|.++.|+|+++.+++++.+ +.|++||+...... ....+..+.. .+..+.+
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 999998888 88999999999999999999999 99999998765321 1222222333 5666666
Q ss_pred cC--CeEEEeecCCcEEEEEccC-Ccccc--cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccce
Q 023772 155 TK--TEIIGGSVDGTVRTFDIRV-GRELS--DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229 (277)
Q Consensus 155 ~~--~~~~~g~~d~~i~i~d~~~-~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 229 (277)
++ ..+++++.|+.|++||++. .+.+. ..+...+.+++|+|++++|++++.|+.|++||+++++.+..+... .
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---~ 260 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD---C 260 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS---S
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC---C
Confidence 54 5699999999999999987 34332 235678999999999999999999999999999999998888733 3
Q ss_pred eeeeeEecCCCceEEeecCCC--------------eEEEEECcCccceeeeccCcceeEee
Q 023772 230 FKTDCCLTNSDAHVTGGSEDG--------------YIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 230 ~~~~~~~~~~~~~l~sgs~d~--------------~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
....++++|++.++++++.++ .+++||..+++.+..+++|...|..+
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~ 321 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTV 321 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEE
Confidence 345677899999999999888 89999999999999999999888754
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.4e-39 Score=286.48 Aligned_cols=261 Identities=25% Similarity=0.452 Sum_probs=217.8
Q ss_pred cccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
+|.+.|.||+++|++++|+|||++|+||+.|++|+|||. ++++++++.+|..+|++++|+|++++|++++.|++|++||
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd 85 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 85 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 566779999999999999999999999999999999995 7788999999999999999999999999999999999999
Q ss_pred CCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc-------------------------------
Q 023772 89 VSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE------------------------------- 137 (277)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~------------------------------- 137 (277)
. +++++.++.+|..+|.+++|+|+++++++++.|+.+++|+.......
T Consensus 86 ~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 164 (577)
T 2ymu_A 86 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 164 (577)
T ss_dssp T-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred C-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceeccccccee
Confidence 6 57888899999999999999999999999999999999996432100
Q ss_pred -------ceEeeccccCcEEEEEecC--CeEEEeecCCcEEEEEccCCcccc--cCCCCCeeEEEEeCCCCEEEEEecCC
Q 023772 138 -------PIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELS--DDLGQPVNCISMSNDGNCILASCLDS 206 (277)
Q Consensus 138 -------~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i~i~d~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~ 206 (277)
.......+...+..+.+.+ ..+++++.|+.|++||... +.+. ..+...+.+++|+|++++|++++.|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~-~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~ 243 (577)
T 2ymu_A 165 LWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 243 (577)
T ss_dssp EECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-CEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCC-cEEEEEecCCCCEEEEEECCCCCEEEEEeCCC
Confidence 0011112334455555554 4589999999999999643 3222 24567899999999999999999999
Q ss_pred eEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 207 TLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 207 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
.|++||. +++.+..+.+|... ...++++|++.++++++.|+.|++||. +++++..+.+|...|..+
T Consensus 244 ~i~~w~~-~~~~~~~~~~~~~~--v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~ 309 (577)
T 2ymu_A 244 TVKLWNR-NGQLLQTLTGHSSS--VNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGV 309 (577)
T ss_dssp CEEEECT-TSCEEEEECCCSSC--EEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEE
T ss_pred EEEEEeC-CCCEEEEEecCCCC--EEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEE
Confidence 9999996 46778888888543 455678999999999999999999996 467888999998877654
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.8e-40 Score=295.74 Aligned_cols=254 Identities=24% Similarity=0.381 Sum_probs=215.5
Q ss_pred ceeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEcCCC-----CeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEE
Q 023772 12 NVLKGHEGAVLAARFNGDG-NYCLSCGKDRTIRLWNPHR-----GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIF 85 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~-~~l~s~s~d~~v~iwd~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~ 85 (277)
..+++|.+.|++++|++++ ++|+|||.|++|++||+.+ +...+.+.+|...|.+++|+|++++|++|+.|++|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4578999999999999864 7999999999999999865 345678899999999999999999999999999999
Q ss_pred EEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceE-eeccccCcEEEEEecCC----eEE
Q 023772 86 YWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-IIDSFQDSVMSVCLTKT----EII 160 (277)
Q Consensus 86 ~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~ 160 (277)
+||+.+++.++.+.+|...|.+++|+|++++|++++.|++|++||.......... ....|...+.++.++++ .++
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 9999999999999999999999999999999999999999999997542111110 11346667888888764 489
Q ss_pred EeecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecC
Q 023772 161 GGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (277)
+|+.|++|++||++.++.... .+...|++++|+|++++|++++.|+.|++||+++++.+..+..+ .....++++|
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp 612 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN---SVIHALCFSP 612 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS---SCEEEEEECS
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC---CcEEEEEEcC
Confidence 999999999999988765433 45678999999999999999999999999999999988776554 2356678999
Q ss_pred CCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 239 ~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
++.++++++ |+.|++||+.+++++..++.|
T Consensus 613 ~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~ 642 (694)
T 3dm0_A 613 NRYWLCAAT-EHGIKIWDLESKSIVEDLKVD 642 (694)
T ss_dssp SSSEEEEEE-TTEEEEEETTTTEEEEEECCC
T ss_pred CCcEEEEEc-CCCEEEEECCCCCChhhhccc
Confidence 988887765 567999999999998887654
No 36
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-39 Score=263.23 Aligned_cols=257 Identities=19% Similarity=0.294 Sum_probs=221.2
Q ss_pred cccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
+....+.+|.++|.+++| +++++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.|+.+++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 445678999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC---ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEe---cCCeEEEe
Q 023772 89 VSTG---RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL---TKTEIIGG 162 (277)
Q Consensus 89 ~~~~---~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g 162 (277)
+... +.+..+..|..+|.++.+ +++++++++.|+.|++||. ......+..+...+..+.+ ++..++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE----GSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET----TEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC----CcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 8654 567788899999999999 4679999999999999992 2344555667777776665 46779999
Q ss_pred ecCCcEEEEEccCCcccccC-CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCc
Q 023772 163 SVDGTVRTFDIRVGRELSDD-LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA 241 (277)
Q Consensus 163 ~~d~~i~i~d~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (277)
+.|+.|++||.......... +...+.+++|+|++. +++++.|+.|++||+++++++..+.+|.. ....++++|++
T Consensus 162 ~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~- 237 (313)
T 3odt_A 162 SADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHES--FVYCIKLLPNG- 237 (313)
T ss_dssp ETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECTTS-
T ss_pred ECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCc--eEEEEEEecCC-
Confidence 99999999996544333333 677899999999998 99999999999999999999999988854 34567789988
Q ss_pred eEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 242 HVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 242 ~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
.+++|+.||.|++||+.+++++..+..|...|..+
T Consensus 238 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~ 272 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSV 272 (313)
T ss_dssp CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEE
T ss_pred CEEEEecCCEEEEEECCCCceeEEEeccCceEEEE
Confidence 68899999999999999999999999998777654
No 37
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.8e-39 Score=263.78 Aligned_cols=245 Identities=23% Similarity=0.389 Sum_probs=207.8
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|..+|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.++.|+|++++|++++.|++|++||++
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecCCcE
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTV 168 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i 168 (277)
+++++..+..|..+|.++.|+|+++++++++.|+.|++||++..... ......+...+..+.+++ ..+++++.|+.|
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 216 (312)
T 4ery_A 138 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 216 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-EEECCSSCCCEEEEEECTTSSEEEEEETTTEE
T ss_pred CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee-eEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 99999999999999999999999999999999999999999765321 112233445566666654 569999999999
Q ss_pred EEEEccCCcccccC--CCC---CeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceE
Q 023772 169 RTFDIRVGRELSDD--LGQ---PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHV 243 (277)
Q Consensus 169 ~i~d~~~~~~~~~~--~~~---~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (277)
++||+++++.+... +.. .+......+++.+|++|+.|+.|++||+++++++..+.+|... ...++++|++.++
T Consensus 217 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~p~~~~l 294 (312)
T 4ery_A 217 KLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDV--VISTACHPTENII 294 (312)
T ss_dssp EEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSC--EEEEEECSSSSEE
T ss_pred EEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCc--EEEEeecCcCCce
Confidence 99999987654332 222 2233333467889999999999999999999999999988643 4566789999999
Q ss_pred Eeec--CCCeEEEEECc
Q 023772 244 TGGS--EDGYIYFWDLV 258 (277)
Q Consensus 244 ~sgs--~d~~i~iwd~~ 258 (277)
++++ .|++|++|+.+
T Consensus 295 ~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 295 ASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECTTTCCEEEEECC
T ss_pred EEEEccCCccEEEecCC
Confidence 9886 69999999975
No 38
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.6e-39 Score=267.48 Aligned_cols=255 Identities=14% Similarity=0.224 Sum_probs=210.8
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC----eeEEEEeccCccEEEEEEcC--CCCEEEEEeCCCcE
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG----IHIKTYKSHGREVRDVHVTA--DNSKLISCGGDRQI 84 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~h~~~v~~~~~~~--~~~~l~t~s~d~~v 84 (277)
...+.+|.++|++++|+|++++|++|+.||.|++||+.++ +....+.+|..+|.+++|+| ++++|++++.|+.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 4567899999999999999999999999999999998876 46778889999999999999 58999999999999
Q ss_pred EEEECCCC---------ceeEEeecccCceeEEEEecC--CCEEEEEeCCCcEEEEeCccCCCcceEee-----------
Q 023772 85 FYWDVSTG---------RVIRKFRGHESEVNAVKFNEY--SSVVVSAGYDQSLRAWDCRSHSTEPIQII----------- 142 (277)
Q Consensus 85 ~~wd~~~~---------~~~~~~~~h~~~v~~i~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~----------- 142 (277)
++||++++ +++..+..|..+|.+++|+|+ ++++++++.||.|++||++..........
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999887 567788899999999999999 99999999999999999876543221111
Q ss_pred ccccCcEEEEEec-----CCeEEEeecCCcEEEEEccCCcc--cc--cCCCCCeeEEEEeCCC----CEEEEEecCCeEE
Q 023772 143 DSFQDSVMSVCLT-----KTEIIGGSVDGTVRTFDIRVGRE--LS--DDLGQPVNCISMSNDG----NCILASCLDSTLR 209 (277)
Q Consensus 143 ~~~~~~~~~~~~~-----~~~~~~g~~d~~i~i~d~~~~~~--~~--~~~~~~v~~~~~s~~~----~~l~~~~~d~~i~ 209 (277)
..+...+..+.+. +..+++++.|+.+.+|+...++. +. ..+...|++++|+|++ ++|++++.|+.|+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 1334455666664 45699999999998888766543 21 2356789999999998 8999999999999
Q ss_pred EEECCCC----------------------------------------------ceEEEEeccccceeeeeeEecCCCceE
Q 023772 210 LLDRSTG----------------------------------------------ELLQEYKGHICKSFKTDCCLTNSDAHV 243 (277)
Q Consensus 210 ~wd~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (277)
+||++.+ +++..+.+|.. .+..++++|++.+|
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNG--EVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEEEEEECTTSS--CEEEEEECSSSCCE
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccc--cEEEEEEcCCCCEE
Confidence 9999764 55666777754 35667889999999
Q ss_pred EeecCCCeEEEEECcCccceeeec
Q 023772 244 TGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 244 ~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
++|+.||.|++||+.+++....+.
T Consensus 322 ~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEecCCCcEEEEecCcCcchhhee
Confidence 999999999999999886655443
No 39
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.9e-40 Score=275.16 Aligned_cols=254 Identities=15% Similarity=0.253 Sum_probs=217.4
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe------eEEEEeccCccEEEEEEcCC----C---CEEE
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI------HIKTYKSHGREVRDVHVTAD----N---SKLI 76 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~------~~~~~~~h~~~v~~~~~~~~----~---~~l~ 76 (277)
....+.+|.++|++++|+| ++|++|+.|++|++||+.+++ ....+..|..+|.+++|+|+ + ++|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 3566789999999999998 799999999999999998887 78889999999999999999 8 9999
Q ss_pred EEeCCCcEEEEECCCCce-----eEEeecc-----cCceeEEEEe----cCCCE-EEEEeCCCcEEEEeCcc------CC
Q 023772 77 SCGGDRQIFYWDVSTGRV-----IRKFRGH-----ESEVNAVKFN----EYSSV-VVSAGYDQSLRAWDCRS------HS 135 (277)
Q Consensus 77 t~s~d~~v~~wd~~~~~~-----~~~~~~h-----~~~v~~i~~~----~~~~~-l~s~~~d~~i~iwd~~~------~~ 135 (277)
+++.|+.|++||+++++. +..+..| ...|.+++|+ |+++. +++++.||.|++||++. ..
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 999999999999998887 8888888 5999999999 99999 99999999999999986 33
Q ss_pred Ccc---eEee-------ccccCcEEEEEecCC-eEEEeecCCcEEEEEccCCccccc--C---C---CCCeeEEEEeCCC
Q 023772 136 TEP---IQII-------DSFQDSVMSVCLTKT-EIIGGSVDGTVRTFDIRVGRELSD--D---L---GQPVNCISMSNDG 196 (277)
Q Consensus 136 ~~~---~~~~-------~~~~~~~~~~~~~~~-~~~~g~~d~~i~i~d~~~~~~~~~--~---~---~~~v~~~~~s~~~ 196 (277)
... ...+ ..+...+..+.++++ .+++++.|+.|++||+++++.+.. . + ..++.+++|+|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~ 245 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 245 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence 222 0022 335666777777654 788999999999999998765433 2 4 6789999999999
Q ss_pred CEEEEEecC---CeEEEEECCCCceEEEEec-------------cccceeeeeeEecCCCceEEeecCCCeEEEEECcCc
Q 023772 197 NCILASCLD---STLRLLDRSTGELLQEYKG-------------HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 197 ~~l~~~~~d---~~i~~wd~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~ 260 (277)
++|++++.| +.|++||+++++.+..+.+ |.. ....++++|++.+|++|+.||.|++||+.++
T Consensus 246 ~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 246 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS--WVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS--CEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC--cEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999999 9999999999999999887 643 4566788999999999999999999999999
Q ss_pred cceeeec
Q 023772 261 SVVAKFK 267 (277)
Q Consensus 261 ~~~~~~~ 267 (277)
+++..++
T Consensus 324 ~~~~~~~ 330 (397)
T 1sq9_A 324 ERITTLN 330 (397)
T ss_dssp EEEEEEE
T ss_pred ceeEEEe
Confidence 9999999
No 40
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.7e-41 Score=281.40 Aligned_cols=249 Identities=23% Similarity=0.359 Sum_probs=210.6
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe-------eEEEEeccCccEEEEEEcCCC-CEEEEEeCC
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-------HIKTYKSHGREVRDVHVTADN-SKLISCGGD 81 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~d 81 (277)
....+.+|...|.+++|+|+|++|++|+.|+.+++||+.+.. ....+.+|.+.|.++.|.|++ .+|++|+.|
T Consensus 100 ~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D 179 (380)
T 3iz6_a 100 KTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGD 179 (380)
T ss_dssp EEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTT
T ss_pred cceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCC
Confidence 345678999999999999999999999999999999986432 345678999999999999974 579999999
Q ss_pred CcEEEEECCCCceeEEe-----ecccCceeEEEEec-CCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEec
Q 023772 82 RQIFYWDVSTGRVIRKF-----RGHESEVNAVKFNE-YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT 155 (277)
Q Consensus 82 ~~v~~wd~~~~~~~~~~-----~~h~~~v~~i~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
++|++||+++++.+..+ .+|...|.++.+++ +++++++|+.|++|++||++... .....+..|...+.++.++
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h~~~v~~v~~~ 258 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGHEGDINSVKFF 258 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCCSSCCCEEEEC
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCcCCCeEEEEEe
Confidence 99999999999988777 67999999999987 78999999999999999997432 3455667788888888876
Q ss_pred C--CeEEEeecCCcEEEEEccCCcccccC---------CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEE--
Q 023772 156 K--TEIIGGSVDGTVRTFDIRVGRELSDD---------LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEY-- 222 (277)
Q Consensus 156 ~--~~~~~g~~d~~i~i~d~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~-- 222 (277)
+ ..+++|+.|++|++||+++++.+... ....+.+++|+|+|++|++|+.||.|++||..+++.+..+
T Consensus 259 p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 338 (380)
T 3iz6_a 259 PDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT 338 (380)
T ss_dssp TTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred cCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEec
Confidence 5 46999999999999999987654321 1124899999999999999999999999999998888776
Q ss_pred --eccccceeeeeeEecCCCceEEeecCCCeEEEEECcCcc
Q 023772 223 --KGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDAS 261 (277)
Q Consensus 223 --~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~ 261 (277)
.+|.. .+..++++|++.+|++|+.|+.|++|++...+
T Consensus 339 ~~~~h~~--~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 339 LQNSHEG--RISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SCSSCCC--CCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ccCCCCC--ceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 45543 35667899999999999999999999987653
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4e-39 Score=283.49 Aligned_cols=258 Identities=25% Similarity=0.461 Sum_probs=224.4
Q ss_pred cccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
+....+.+|.++|.+++|+|+++++++++.|+++++||... ..+..+.+|..++.+++|+|++++|++++.|+.+++||
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 34456789999999999999999999999999999999764 55678889999999999999999999999999999999
Q ss_pred CCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecCC
Q 023772 89 VSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDG 166 (277)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~ 166 (277)
. +++++..+.+|..+|.+++|+|++++|++++.|+.|++||... .....+..+...+..+.+++ ..+++++.|+
T Consensus 373 ~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~---~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~ 448 (577)
T 2ymu_A 373 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDDQTIASASDDK 448 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC---CEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC---CEEEEecCCCCCeEEEEECCCCCEEEEEcCCC
Confidence 5 5778889999999999999999999999999999999999642 34555667888888888775 4599999999
Q ss_pred cEEEEEccCCcccc--cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEE
Q 023772 167 TVRTFDIRVGRELS--DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244 (277)
Q Consensus 167 ~i~i~d~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (277)
+|++||... +.+. ..+..+|++++|+|++++|++++.|+.|++||. ++++++.+.+|... +..++++|++++|+
T Consensus 449 ~v~~w~~~~-~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~--v~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 449 TVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS--VRGVAFSPDGQTIA 524 (577)
T ss_dssp EEEEEETTS-CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSC--EEEEEECTTSSCEE
T ss_pred EEEEEECCC-CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCC--EEEEEEcCCCCEEE
Confidence 999999753 3222 245678999999999999999999999999995 67888999998644 45678999999999
Q ss_pred eecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 245 GGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 245 sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
+|+.||.|++||. +++++..+.+|+..|..+
T Consensus 525 s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~ 555 (577)
T 2ymu_A 525 SASDDKTVKLWNR-NGQLLQTLTGHSSSVWGV 555 (577)
T ss_dssp EEETTSEEEEECT-TSCEEEEEECCSSCEEEE
T ss_pred EEECcCEEEEEeC-CCCEEEEEcCCCCCEEEE
Confidence 9999999999995 688999999999988754
No 42
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.8e-39 Score=271.01 Aligned_cols=259 Identities=14% Similarity=0.101 Sum_probs=215.4
Q ss_pred cceeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCeeEEEEe--ccCccEEEEEEcC-CCCEEEEEeCCCcEEE
Q 023772 11 ANVLKGHEGAVLAARFNGDG-NYCLSCGKDRTIRLWNPHRGIHIKTYK--SHGREVRDVHVTA-DNSKLISCGGDRQIFY 86 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~-~~~~l~t~s~d~~v~~ 86 (277)
...+.+|.++|.+++|+|++ ++|++|+.|+.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.|++
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 44678999999999999999 999999999999999999887777765 6999999999999 6789999999999999
Q ss_pred EECCCCceeEEeecc---cCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC---eEE
Q 023772 87 WDVSTGRVIRKFRGH---ESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT---EII 160 (277)
Q Consensus 87 wd~~~~~~~~~~~~h---~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 160 (277)
||+++ ..+..+..| ...|.+++|+|+++++++++.|+.|++||++ ......+..+...+.++.+++. .++
T Consensus 146 wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 146 RDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD---GHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp EETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT---SCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred EECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC---CCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 99986 445555444 4889999999999999999999999999984 2355666778888999988765 689
Q ss_pred EeecCCcEEEEEccCC----cccc-cCCCCCeeEEEEeC-CCCEEEEEecCCeEEEEECCCCceEEEEeccccc------
Q 023772 161 GGSVDGTVRTFDIRVG----RELS-DDLGQPVNCISMSN-DGNCILASCLDSTLRLLDRSTGELLQEYKGHICK------ 228 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~----~~~~-~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~------ 228 (277)
+++.|+.|++||++.. ..+. ..+...+.+++|+| ++++|++++.|+.|++||+++++....+.+|...
T Consensus 222 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (383)
T 3ei3_B 222 TSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLT 301 (383)
T ss_dssp EEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSC
T ss_pred EEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccccc
Confidence 9999999999999873 2222 23567899999999 9999999999999999999998887777755321
Q ss_pred ---------eeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeecc--CcceeEe
Q 023772 229 ---------SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKA--HSLVVKL 275 (277)
Q Consensus 229 ---------~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~--h~~~v~~ 275 (277)
.....++++|++++ +|+.|+.|++||+.+++++.++++ |...+.+
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~ 357 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISL 357 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCE
T ss_pred ceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEE
Confidence 11122456777777 888999999999999999999987 4455543
No 43
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.4e-39 Score=292.75 Aligned_cols=263 Identities=16% Similarity=0.273 Sum_probs=234.3
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.+.|.+++|+|++++|++++.||.|++||..+++.+..+..|..+|++++|+|++++|++++.|+.|++||+.
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC---CeEEEeecCCc
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK---TEIIGGSVDGT 167 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~d~~ 167 (277)
+++.+..+.+|...|.+++|+|+++.+++++.||+|++||+.... .....+..+...+..+.+++ ..+++++.||.
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~ 164 (814)
T 3mkq_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (814)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCe
Confidence 999999999999999999999999999999999999999997642 33455667788888888876 35899999999
Q ss_pred EEEEEccCCccccc---CCCCCeeEEEEeC--CCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCce
Q 023772 168 VRTFDIRVGRELSD---DLGQPVNCISMSN--DGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242 (277)
Q Consensus 168 i~i~d~~~~~~~~~---~~~~~v~~~~~s~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (277)
|++||++.+..... .....+.+++|+| ++.+|++++.|+.|++||+.+++.+..+.+|... ...++++|++.+
T Consensus 165 v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~--v~~~~~~~~~~~ 242 (814)
T 3mkq_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN--VSFAVFHPTLPI 242 (814)
T ss_dssp EEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSC--EEEEEECSSSSE
T ss_pred EEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcCCCCE
Confidence 99999987654322 3346899999999 9999999999999999999999999999888543 455678999999
Q ss_pred EEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 243 VTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 243 l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
+++|+.||.|++||+.+++.+..+..|...|..+
T Consensus 243 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~ 276 (814)
T 3mkq_A 243 IISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCI 276 (814)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCSSSSEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEE
Confidence 9999999999999999999999999887666543
No 44
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-38 Score=273.16 Aligned_cols=250 Identities=23% Similarity=0.391 Sum_probs=216.2
Q ss_pred cceeeccCCcE-EEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 11 ANVLKGHEGAV-LAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 11 ~~~l~~H~~~V-~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
...+.+|.++| .++.| ++++|++|+.||+|++||+.+++.+..+.+|.++|.+++|++++ ++++|+.|++|++||+
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEET
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEEC
Confidence 45788999885 55555 56799999999999999999999999999999999999999887 9999999999999999
Q ss_pred CCCceeEEeecccCceeEEEEe--cCCCEEEEEeCCCcEEEEeCccCCCcc---------------------eEeecccc
Q 023772 90 STGRVIRKFRGHESEVNAVKFN--EYSSVVVSAGYDQSLRAWDCRSHSTEP---------------------IQIIDSFQ 146 (277)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~i~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~---------------------~~~~~~~~ 146 (277)
++++++..+.+|..+|.++++. +++.++++++.|++|++||++...... ......+.
T Consensus 191 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 191 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 9999999999999999999998 467899999999999999997643221 33456677
Q ss_pred CcEEEEEecCCeEEEeecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEec
Q 023772 147 DSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG 224 (277)
Q Consensus 147 ~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 224 (277)
..+..+..++..+++|+.|+.|++||+++++.+.. .+...+.+++|+|+++++++|+.|+.|++||+++++++..+.+
T Consensus 271 ~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 350 (464)
T 3v7d_B 271 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 350 (464)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred ceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC
Confidence 78888888899999999999999999998776543 3567899999999999999999999999999999999999998
Q ss_pred cccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeec
Q 023772 225 HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
|.... ....++ +.++++|+.||.|++||+.+++....+.
T Consensus 351 h~~~v--~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 389 (464)
T 3v7d_B 351 HTALV--GLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH 389 (464)
T ss_dssp CSSCE--EEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCcE--EEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec
Confidence 86543 333443 6899999999999999999987665553
No 45
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=269.06 Aligned_cols=273 Identities=15% Similarity=0.241 Sum_probs=217.3
Q ss_pred CCcCCccccccceeeccCCcEEEEEEeCCCCEEE-EEeC---CCcEEEEcCCCCeeEEEE-eccCccEEEEEEcCC---C
Q 023772 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCL-SCGK---DRTIRLWNPHRGIHIKTY-KSHGREVRDVHVTAD---N 72 (277)
Q Consensus 1 ~~~~~~~~~~~~~l~~H~~~V~~~~~~~~~~~l~-s~s~---d~~v~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~---~ 72 (277)
|+-.+-|......+.+|.++|.+++|+|++..++ +++. |+.|++||+.+++..... .+|..+|.+++|+|+ +
T Consensus 1 m~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 80 (357)
T 3i2n_A 1 MSAFEKPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQ 80 (357)
T ss_dssp ----CCCCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTT
T ss_pred CCccChhHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCC
Confidence 3444556666677889999999999999996555 5665 999999999988765443 378999999999998 6
Q ss_pred CEEEEEeCCCcEEEEECCCCc-eeEEeecccCceeEEEE------ecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccc
Q 023772 73 SKLISCGGDRQIFYWDVSTGR-VIRKFRGHESEVNAVKF------NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSF 145 (277)
Q Consensus 73 ~~l~t~s~d~~v~~wd~~~~~-~~~~~~~h~~~v~~i~~------~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 145 (277)
++|++++.|+.|++||+++++ ++..+.+|...|.++.+ +++++++++++.|+.|++||++.... ....+..+
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~ 159 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD-PVANMEPV 159 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS-CSEEECCC
T ss_pred ceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC-cceecccc
Confidence 999999999999999999988 88899999999999965 67899999999999999999986542 23333332
Q ss_pred c----CcEEEEE------ecCCeEEEeecCCcEEEEEccCCccccc-CCCCCeeEEEEeC---CCCEEEEEecCCeEEEE
Q 023772 146 Q----DSVMSVC------LTKTEIIGGSVDGTVRTFDIRVGRELSD-DLGQPVNCISMSN---DGNCILASCLDSTLRLL 211 (277)
Q Consensus 146 ~----~~~~~~~------~~~~~~~~g~~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~---~~~~l~~~~~d~~i~~w 211 (277)
. ..+.++. .++..+++++.|+.|++||++.++.... .+...+.+++|+| ++.+|++++.|+.|++|
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~ 239 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVF 239 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEE
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEE
Confidence 2 2566666 3456799999999999999998765432 4567899999999 99999999999999999
Q ss_pred ECCCCceEEEEe-----ccccceeeeeeEecCCCc-eEEeecCCCeEEEEECcCc-------------------cceeee
Q 023772 212 DRSTGELLQEYK-----GHICKSFKTDCCLTNSDA-HVTGGSEDGYIYFWDLVDA-------------------SVVAKF 266 (277)
Q Consensus 212 d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~l~sgs~d~~i~iwd~~~~-------------------~~~~~~ 266 (277)
|+++++.+..+. +|.. ....++++|++. ++++|+.||.|++||+.++ +++..+
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 317 (357)
T 3i2n_A 240 DMRTQHPTKGFASVSEKAHKS--TVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV 317 (357)
T ss_dssp EEEEEETTTEEEEEEEECCSS--CEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred eCcCCCcccceeeeccCCCcC--CEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc
Confidence 998776655444 6643 345677899988 8999999999999999864 467788
Q ss_pred ccCcceeEee
Q 023772 267 KAHSLVVKLL 276 (277)
Q Consensus 267 ~~h~~~v~~~ 276 (277)
.+|...|..+
T Consensus 318 ~~~~~~v~~~ 327 (357)
T 3i2n_A 318 TLSTQPISSL 327 (357)
T ss_dssp ECCSSCEEEE
T ss_pred ccCCCCeeEE
Confidence 8898877654
No 46
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=265.03 Aligned_cols=266 Identities=16% Similarity=0.300 Sum_probs=222.8
Q ss_pred cccccceeeccCCcEEEEEEeCC---CCEEEEEeCCCcEEEEcCCC-CeeE-EEEeccCccEEEEEEcCCCCEEEEEeCC
Q 023772 7 PRTEANVLKGHEGAVLAARFNGD---GNYCLSCGKDRTIRLWNPHR-GIHI-KTYKSHGREVRDVHVTADNSKLISCGGD 81 (277)
Q Consensus 7 ~~~~~~~l~~H~~~V~~~~~~~~---~~~l~s~s~d~~v~iwd~~~-~~~~-~~~~~h~~~v~~~~~~~~~~~l~t~s~d 81 (277)
|......+.+|.++|++++|+|+ |++|++|+.|+.|++||+.+ +..+ ..+.+|..+|.+++|+|++++|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 44556678899999999999999 69999999999999999987 5544 7888999999999999999999999999
Q ss_pred CcEEEEECCCCceeEEeecccCceeEEEE--ecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeE
Q 023772 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKF--NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEI 159 (277)
Q Consensus 82 ~~v~~wd~~~~~~~~~~~~h~~~v~~i~~--~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
+.|++||+++++++. +..|..+|.++.| +++++++++++.||.|++||++.... ...+.. ...+..+.+.+..+
T Consensus 108 g~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~-~~~~~~~~~~~~~~ 183 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP--MMVLQL-PERCYCADVIYPMA 183 (368)
T ss_dssp SEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC--SEEEEC-SSCEEEEEEETTEE
T ss_pred CcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE--EEEEec-CCCceEEEecCCee
Confidence 999999999988776 5669999999999 88999999999999999999987543 333333 34677777888889
Q ss_pred EEeecCCcEEEEEccCCccc----ccCCCCCeeEEEEeCCCCE----EEEEecCCeEEEEECCCC---ceEEEEeccccc
Q 023772 160 IGGSVDGTVRTFDIRVGREL----SDDLGQPVNCISMSNDGNC----ILASCLDSTLRLLDRSTG---ELLQEYKGHICK 228 (277)
Q Consensus 160 ~~g~~d~~i~i~d~~~~~~~----~~~~~~~v~~~~~s~~~~~----l~~~~~d~~i~~wd~~~~---~~~~~~~~~~~~ 228 (277)
++++.++.+++||++..... .........++.+.++... +++++.|+.|++||+... +.+..+.+|...
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecc
Confidence 99999999999999875432 2233456777777766554 999999999999999877 556777777432
Q ss_pred e----------eeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 229 S----------FKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 229 ~----------~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
. ....++++|++.+|++|+.||.|++||+.+++++..+++|...|..+
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 321 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISAC 321 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEE
T ss_pred cccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEE
Confidence 1 35667899999999999999999999999999999999999888754
No 47
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.2e-39 Score=266.45 Aligned_cols=244 Identities=14% Similarity=0.200 Sum_probs=208.8
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe--eEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI--HIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
.+..|.++|.+++|+|++++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 456799999999999999999999999999999999887 888999999999999999999999999999999999998
Q ss_pred CCceeEE--eecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc--ceEeeccccCcEEEEEecC--CeEEEeec
Q 023772 91 TGRVIRK--FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE--PIQIIDSFQDSVMSVCLTK--TEIIGGSV 164 (277)
Q Consensus 91 ~~~~~~~--~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~g~~ 164 (277)
+++.... +..|...|.+++|+|+++++++++.|+.|++||++..... .......+...+..+.+.+ ..+++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 8875443 4678999999999999999999999999999999865421 1222345677888888865 45999999
Q ss_pred CCcEEEEEcc------------------CCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEec
Q 023772 165 DGTVRTFDIR------------------VGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG 224 (277)
Q Consensus 165 d~~i~i~d~~------------------~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 224 (277)
|+.|++||++ .++.+.. .+...+.+++|+|++++|++++.|+.|++||+++++++..+..
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 9999999964 2332222 3456899999999999999999999999999999999999988
Q ss_pred cccceeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 225 HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
|.. ....++++|++.++++| .|+.|++|++.+
T Consensus 243 ~~~--~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 243 ETL--PLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SSC--CEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCC--CeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 753 34556788999999988 899999999988
No 48
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=276.24 Aligned_cols=250 Identities=16% Similarity=0.310 Sum_probs=204.7
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe-----------eEEEEeccC------------ccEEEEEEcCCC
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-----------HIKTYKSHG------------REVRDVHVTADN 72 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~-----------~~~~~~~h~------------~~v~~~~~~~~~ 72 (277)
.|.++|.+++|+|+|++|++|+.||.|+|||+.++. ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 468999999999999999999999999999998776 578899998 889999999998
Q ss_pred --CEEEEEeCCCcEEEEECCCCcee---------------------------------------EE-eecccCceeEEEE
Q 023772 73 --SKLISCGGDRQIFYWDVSTGRVI---------------------------------------RK-FRGHESEVNAVKF 110 (277)
Q Consensus 73 --~~l~t~s~d~~v~~wd~~~~~~~---------------------------------------~~-~~~h~~~v~~i~~ 110 (277)
.+|++++.|++|++||+.+++.. +. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999999764432 12 3579999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEeCccCCCcceE-------eeccccCcEEEEEecCC---eEEEeecCCcEEEEEccCCcc--
Q 023772 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ-------IIDSFQDSVMSVCLTKT---EIIGGSVDGTVRTFDIRVGRE-- 178 (277)
Q Consensus 111 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~g~~d~~i~i~d~~~~~~-- 178 (277)
+|++++|++| .|+.|++||++.... ... .+..+...+.++.+++. .+++|+.|+.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCc-eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 9999999998 899999999974221 121 24467778888888764 599999999999999988764
Q ss_pred --ccc--CCCC------------CeeEEEEeCCCCEEEEEecCCeEEEEECCC-CceEEEEecccccee-----------
Q 023772 179 --LSD--DLGQ------------PVNCISMSNDGNCILASCLDSTLRLLDRST-GELLQEYKGHICKSF----------- 230 (277)
Q Consensus 179 --~~~--~~~~------------~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~----------- 230 (277)
... .+.. .|.+++|+|+|++|++++. +.|++||+++ ++++..+.+|.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 221 2222 8999999999999999998 9999999987 888888888743111
Q ss_pred --eeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 231 --KTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 231 --~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
...++++|++.+|++|+.||.|++||+.+++.+ .+.+|
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~ 382 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEAS 382 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECC
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeec
Confidence 123689999999999999999999999998775 44444
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.1e-39 Score=270.89 Aligned_cols=243 Identities=19% Similarity=0.291 Sum_probs=207.0
Q ss_pred cCCcEEEEEEeCC----CCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcC-CCCEEEEEeCCCcEEEEECCC
Q 023772 17 HEGAVLAARFNGD----GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA-DNSKLISCGGDRQIFYWDVST 91 (277)
Q Consensus 17 H~~~V~~~~~~~~----~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~d~~v~~wd~~~ 91 (277)
|.+.|.+++|+|+ +.+|++|+.|+.|++||+.+++.+..+.+|..+|.+++|+| ++.+|++++.|+.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6688999999999 67999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CceeEEe---ecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc--------------------------ceEee
Q 023772 92 GRVIRKF---RGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE--------------------------PIQII 142 (277)
Q Consensus 92 ~~~~~~~---~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--------------------------~~~~~ 142 (277)
++.+..+ ..|...|.+++|+|+++++++++.||.|++||++..... .....
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 9998888 689999999999999999999999999999998753211 01112
Q ss_pred ccccCcEEEEEecCCeEEEeecCCcEEEEEccCCccc--------------c--cCCCCCeeEEEEeCC--CCEEEEEec
Q 023772 143 DSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGREL--------------S--DDLGQPVNCISMSND--GNCILASCL 204 (277)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~--------------~--~~~~~~v~~~~~s~~--~~~l~~~~~ 204 (277)
..+...+.++.++++.+++++.|+.|++||++..... . ..+...+++++|+|+ +++|++++.
T Consensus 228 ~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~ 307 (366)
T 3k26_A 228 DIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ 307 (366)
T ss_dssp SSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT
T ss_pred cCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec
Confidence 2366778888888889999999999999999876431 1 123457888999999 999999999
Q ss_pred CCeEEEEECCCCc----eEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 205 DSTLRLLDRSTGE----LLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 205 d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
||.|++||+.+++ ....+.+|........++++|++.+|++|+.||.|++||+.+
T Consensus 308 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 308 VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999998875 344677774345567788999999999999999999999853
No 50
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-39 Score=275.03 Aligned_cols=254 Identities=15% Similarity=0.255 Sum_probs=204.4
Q ss_pred cee-eccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEcCCC---Ce---eEEEEeccCccEEEEEEcCCCCEEEEEeCCCc
Q 023772 12 NVL-KGHEGAVLAARFNG-DGNYCLSCGKDRTIRLWNPHR---GI---HIKTYKSHGREVRDVHVTADNSKLISCGGDRQ 83 (277)
Q Consensus 12 ~~l-~~H~~~V~~~~~~~-~~~~l~s~s~d~~v~iwd~~~---~~---~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~ 83 (277)
..+ .+|.++|++++|+| ++++|+||+.|++|++||+.+ +. ....+ .|..+|.+++|+|++++|++++.|++
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 345 78999999999999 999999999999999999765 32 23344 48999999999999999999999999
Q ss_pred EEEEECC---CCceeEEeec------------ccCceeEEE--EecCCCEEEEEeCCCcEEEEeCccCCCcceEeecc--
Q 023772 84 IFYWDVS---TGRVIRKFRG------------HESEVNAVK--FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDS-- 144 (277)
Q Consensus 84 v~~wd~~---~~~~~~~~~~------------h~~~v~~i~--~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-- 144 (277)
|++||++ +++.+..+.. +...+.++. +++++.++++++.|+.|++||++... ....+..
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~ 212 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE--RLQIIENSP 212 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC--EEEEEECCG
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe--eeEEEccCC
Confidence 9999995 5555544433 344555555 44778999999999999999998654 3444444
Q ss_pred ccCcEEEEEecC--CeEEEeecCCcEEEEEccCCccccc---CCCCCeeEEEEe----CCCCEEEEEecCCeEEEEECCC
Q 023772 145 FQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELSD---DLGQPVNCISMS----NDGNCILASCLDSTLRLLDRST 215 (277)
Q Consensus 145 ~~~~~~~~~~~~--~~~~~g~~d~~i~i~d~~~~~~~~~---~~~~~v~~~~~s----~~~~~l~~~~~d~~i~~wd~~~ 215 (277)
+...+.++.+++ ..+++|+.||.|++||++.++.+.. .+..+|.+++|+ |++.+|++++.|+.|++||+++
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 677888888865 4599999999999999998776543 334579999555 5678999999999999999999
Q ss_pred CceEEEEeccccc------------------------eeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 216 GELLQEYKGHICK------------------------SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 216 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
++++..+.+|... .....++++ ++.+|++|+.|+.|++||+.+++....+.+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecc
Confidence 9999888866311 113345666 6789999999999999999999999999875
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.1e-38 Score=265.88 Aligned_cols=253 Identities=18% Similarity=0.289 Sum_probs=212.3
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG- 92 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~- 92 (277)
+.+|.+.|++++|+|+|++|++|+.|++|++||+.+++.+..+.+|...+.++.++ +..|++|+.|+.+++||....
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc
Confidence 35788899999999999999999999999999999999999999999999988875 678999999999999998864
Q ss_pred ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc--ceEeeccccCcEEEEEecCC---eEEE--eecC
Q 023772 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE--PIQIIDSFQDSVMSVCLTKT---EIIG--GSVD 165 (277)
Q Consensus 93 ~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~--g~~d 165 (277)
..+.++.+|...+..+.+.++++++++++.|+.+++|+....... .......+...+..+.+.+. .+++ |+.|
T Consensus 221 ~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 221 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 556788999999999999999999999999999999998765432 33445667778888887653 3443 5689
Q ss_pred CcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEe--cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCce
Q 023772 166 GTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASC--LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242 (277)
Q Consensus 166 ~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (277)
++|++||+++++.... .....+.++.|+|+++.+++++ .|+.|++||+.+++++..+.+|... +..++++|++.+
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~--V~~l~~spdg~~ 378 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR--VLSLTMSPDGAT 378 (420)
T ss_dssp CEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC--EEEEEECTTSSC
T ss_pred CEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcCCCCE
Confidence 9999999998876544 3446789999999999998875 7999999999999999999999654 566789999999
Q ss_pred EEeecCCCeEEEEECcCccceeeeccCc
Q 023772 243 VTGGSEDGYIYFWDLVDASVVAKFKAHS 270 (277)
Q Consensus 243 l~sgs~d~~i~iwd~~~~~~~~~~~~h~ 270 (277)
|++|+.|++|+|||+.+.....+.+.|.
T Consensus 379 l~S~s~D~tvriWdv~~~~~~~~~~~~~ 406 (420)
T 4gga_A 379 VASAAADETLRLWRCFELDPARRREREK 406 (420)
T ss_dssp EEEEETTTEEEEECCSCSSCC-------
T ss_pred EEEEecCCeEEEEECCCCCccchhhhcc
Confidence 9999999999999999877776666554
No 52
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-38 Score=271.96 Aligned_cols=260 Identities=14% Similarity=0.100 Sum_probs=205.4
Q ss_pred ceeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCee--EEEEeccCccEEEEEEcC-CCCEEEEEeCCCcEEEE
Q 023772 12 NVLKGHEGAVLAARFNG-DGNYCLSCGKDRTIRLWNPHRGIH--IKTYKSHGREVRDVHVTA-DNSKLISCGGDRQIFYW 87 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~-~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~h~~~v~~~~~~~-~~~~l~t~s~d~~v~~w 87 (277)
....+|...|++++|+| ++++||+|+.||+|+|||+.++.. ...+.+|.++|++++|+| ++++|+|||.|++|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 34568999999999999 567999999999999999887654 445668999999999998 67899999999999999
Q ss_pred ECCCCceeEEeec--ccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC---eEEEe
Q 023772 88 DVSTGRVIRKFRG--HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT---EIIGG 162 (277)
Q Consensus 88 d~~~~~~~~~~~~--h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g 162 (277)
|++++........ +...+.+++|++++++|++|+.||.|++||++.. .+..+..|...+.++.+++. .+++|
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---ELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---BCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---eeEEEecccceEEeeeecCCCceEEEEe
Confidence 9987654433333 3456789999999999999999999999998643 33445678888999998754 47899
Q ss_pred ecCCcEEEEEccCCcccc-----cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccc----eeeee
Q 023772 163 SVDGTVRTFDIRVGRELS-----DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK----SFKTD 233 (277)
Q Consensus 163 ~~d~~i~i~d~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~----~~~~~ 233 (277)
+.|++|++||++..+... ..+..+|++++|+|+|++|++++.|+.|++||+.+++....+..|... .....
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE
Confidence 999999999998765332 235568999999999999999999999999999998887777665321 11223
Q ss_pred eEecCCCceEEee------------cCCCeEEEEECcCccceeeec-cCcceeE
Q 023772 234 CCLTNSDAHVTGG------------SEDGYIYFWDLVDASVVAKFK-AHSLVVK 274 (277)
Q Consensus 234 ~~~~~~~~~l~sg------------s~d~~i~iwd~~~~~~~~~~~-~h~~~v~ 274 (277)
+.+++++.+++++ ..++.|++||..+++++.++. +|...|.
T Consensus 350 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~ 403 (435)
T 4e54_B 350 AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGIS 403 (435)
T ss_dssp CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCC
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEE
Confidence 3455555555444 345689999999999998876 5766554
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.9e-38 Score=283.35 Aligned_cols=246 Identities=21% Similarity=0.404 Sum_probs=206.5
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.+.|.+++|+|++++|+||+.|++|++||+.++.....+.+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 423 ~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 423 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred cceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCceeEE---eecccCceeEEEEecCC--CEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEee
Q 023772 91 TGRVIRK---FRGHESEVNAVKFNEYS--SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGS 163 (277)
Q Consensus 91 ~~~~~~~---~~~h~~~v~~i~~~~~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~ 163 (277)
....... ..+|...|.++.|+|++ ..+++++.|++|++||++... ....+..|...+.++.+++ ..+++|+
T Consensus 503 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~--~~~~~~~h~~~v~~v~~spdg~~l~sg~ 580 (694)
T 3dm0_A 503 GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK--LRSTLAGHTGYVSTVAVSPDGSLCASGG 580 (694)
T ss_dssp SCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc--EEEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 5543322 24688999999999986 589999999999999997643 3455677888898888875 4599999
Q ss_pred cCCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccc--------------
Q 023772 164 VDGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK-------------- 228 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~-------------- 228 (277)
.|++|++||+++++.+.. .....+.+++|+|++.+++++ .|+.|++||+++++.+..+..+...
T Consensus 581 ~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (694)
T 3dm0_A 581 KDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATK 659 (694)
T ss_dssp TTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEE-ETTEEEEEETTTTEEEEEECCCCC---------------
T ss_pred CCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCC
Confidence 999999999998876544 334679999999999876665 5667999999999888877543210
Q ss_pred ---eeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 229 ---SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 229 ---~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
.....++++|++.+|++|+.||.|++||+..
T Consensus 660 ~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 660 RKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp -CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 1234567899999999999999999999863
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.3e-38 Score=265.54 Aligned_cols=242 Identities=19% Similarity=0.260 Sum_probs=200.3
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR 93 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~ 93 (277)
+.+| ..+....|++++++|++|+.|+.|++||+.+++....+.+|...|++++|+|++++|++++.|++|++||+++++
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 3445 445556789999999999999999999999999888888999999999999999999999999999999999999
Q ss_pred eeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeec---cccCcEEEEEe----------------
Q 023772 94 VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIID---SFQDSVMSVCL---------------- 154 (277)
Q Consensus 94 ~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~---------------- 154 (277)
.+..+.+|..+|.+++|+|++++|++++.|++|++||+++... ...+. .+...+..+.+
T Consensus 173 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 173 NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 9999999999999999999999999999999999999976532 22332 23333444433
Q ss_pred -------cCCeEEEeecCCcEEEEEccCCccccc---CCCCCeeEEEEeCCCC-EEEEEecCCeEEEEECCCCce-EEEE
Q 023772 155 -------TKTEIIGGSVDGTVRTFDIRVGRELSD---DLGQPVNCISMSNDGN-CILASCLDSTLRLLDRSTGEL-LQEY 222 (277)
Q Consensus 155 -------~~~~~~~g~~d~~i~i~d~~~~~~~~~---~~~~~v~~~~~s~~~~-~l~~~~~d~~i~~wd~~~~~~-~~~~ 222 (277)
++..+++|+.||.|++||+++++.... .+...+.+++|+|++. +|++|+.||.|++||+++++. +..+
T Consensus 251 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 251 NNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEF 330 (420)
T ss_dssp CTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred cceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhh
Confidence 334689999999999999998765432 3456899999999998 999999999999999998744 6777
Q ss_pred eccccceeeeeeEecCCCceEEeecCCCeEEEEECcCc
Q 023772 223 KGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~ 260 (277)
.+|.... ..+.+.+++.++++|+.|+.|++||+.+.
T Consensus 331 ~~~~~~~--v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 331 LINEGTP--INNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EESTTSC--EEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred hccCCCC--ceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 7643322 22334567889999999999999998874
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.4e-37 Score=253.94 Aligned_cols=255 Identities=16% Similarity=0.280 Sum_probs=214.6
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe---eEEEEe--ccCccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI---HIKTYK--SHGREVRDVHVTADNSKLISCGGDRQIFYW 87 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~--~h~~~v~~~~~~~~~~~l~t~s~d~~v~~w 87 (277)
...+|.++|.+++|+|+++++++++ |+.|++||+.++. ....+. .|...|.+++|+|++++|++++.|+.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3458999999999999999999999 9999999988754 233444 789999999999999999999999999999
Q ss_pred ECCCCc--eeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEee
Q 023772 88 DVSTGR--VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGS 163 (277)
Q Consensus 88 d~~~~~--~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~ 163 (277)
|+++++ ....+..|...|.+++|+|+++++++++.|+.|++||++.. .....+..+...+..+.+++ ..+++++
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ--TLVRQFQGHTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC--ceeeeeecccCceEEEEECCCCCEEEEEe
Confidence 999877 66778889999999999999999999999999999999764 34455666778888888865 4699999
Q ss_pred cCCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCce
Q 023772 164 VDGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (277)
.|+.|++||++.++.... ....++.+++|+|+++++++++.|+.|++||+.+++.. .+..|.. ....++++|++++
T Consensus 203 ~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~--~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHES--CVLSLKFAYCGKW 279 (337)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSS--CEEEEEECTTSSE
T ss_pred cCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCcc--ceeEEEECCCCCE
Confidence 999999999998765433 35678999999999999999999999999999987754 4555543 3566788999999
Q ss_pred EEeecCCCeEEEEECcCccceeeeccCcceeE
Q 023772 243 VTGGSEDGYIYFWDLVDASVVAKFKAHSLVVK 274 (277)
Q Consensus 243 l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~ 274 (277)
+++++.||.|++||+.+++.+.... |...|.
T Consensus 280 l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~v~ 310 (337)
T 1gxr_A 280 FVSTGKDNLLNAWRTPYGASIFQSK-ESSSVL 310 (337)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEE-CSSCEE
T ss_pred EEEecCCCcEEEEECCCCeEEEEec-CCCcEE
Confidence 9999999999999999998875543 444443
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-37 Score=262.02 Aligned_cols=258 Identities=15% Similarity=0.198 Sum_probs=214.1
Q ss_pred eccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEcC----CCCe------eEEEEec----------cCccEEEEEEcCCCC
Q 023772 15 KGHEGAVLAARFNGDGN-YCLSCGKDRTIRLWNP----HRGI------HIKTYKS----------HGREVRDVHVTADNS 73 (277)
Q Consensus 15 ~~H~~~V~~~~~~~~~~-~l~s~s~d~~v~iwd~----~~~~------~~~~~~~----------h~~~v~~~~~~~~~~ 73 (277)
..|.++|.+++|+|+++ +|++|+.|+.|++||+ .+++ ....+.. |...|++++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34669999999999999 9999999999999999 8877 4555554 678999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc----------------
Q 023772 74 KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE---------------- 137 (277)
Q Consensus 74 ~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---------------- 137 (277)
+|++++.|+.|++|| .+++.+..+..|..+|.+++|+|+++++++++.|+.|++||+......
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAE 200 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----------
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeec
Confidence 999999999999999 677888899999999999999999999999999999999998643210
Q ss_pred --------------------------------------ceEeeccccCcEEEEEecC--CeEEEeecCCcEEEEEccCCc
Q 023772 138 --------------------------------------PIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGR 177 (277)
Q Consensus 138 --------------------------------------~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i~i~d~~~~~ 177 (277)
....+..+...+..+.+++ ..+++++.|+.|++||++.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN 280 (425)
T ss_dssp -----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS
T ss_pred cccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 1112223455667776654 459999999999999998876
Q ss_pred cccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEE
Q 023772 178 ELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255 (277)
Q Consensus 178 ~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iw 255 (277)
.... .+...+.+++|+|++ ++++++.|+.|++||+++++++..+..|.. ....++++|++.++++|+.||.|++|
T Consensus 281 ~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 281 SQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV--PIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp CSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC--CEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc--cEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 5433 356789999999999 999999999999999999999998887754 34567789999999999999999999
Q ss_pred ECcCcc--------------------ceeeeccCcc--eeEee
Q 023772 256 DLVDAS--------------------VVAKFKAHSL--VVKLL 276 (277)
Q Consensus 256 d~~~~~--------------------~~~~~~~h~~--~v~~~ 276 (277)
|+.+++ ++..+.+|.. .|..+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 400 (425)
T 1r5m_A 358 DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDL 400 (425)
T ss_dssp ECHHHHC--------------CEECCEEEEECCTTCCCCEEEE
T ss_pred ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEE
Confidence 999998 8999999965 66543
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-37 Score=262.64 Aligned_cols=246 Identities=19% Similarity=0.278 Sum_probs=205.6
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCce
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS-TGRV 94 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~-~~~~ 94 (277)
.|.++|.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|.++.|+ +..|++++.|+.|++||+. .+..
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcce
Confidence 389999999999999999999999999999999999999999999999999994 5799999999999999998 5677
Q ss_pred eEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC---eEEEee--cCCcEE
Q 023772 95 IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT---EIIGGS--VDGTVR 169 (277)
Q Consensus 95 ~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~--~d~~i~ 169 (277)
+..+.+|...|.+++|+|+++++++++.|+.|++||++.. .....+..+...+.++.+.+. .+++|+ .|+.|+
T Consensus 210 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 8889999999999999999999999999999999999864 344556667778888888763 356654 799999
Q ss_pred EEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEe--cCCeEEEEECCCCceEEE--EeccccceeeeeeEecCCCceEE
Q 023772 170 TFDIRVGRELSD-DLGQPVNCISMSNDGNCILASC--LDSTLRLLDRSTGELLQE--YKGHICKSFKTDCCLTNSDAHVT 244 (277)
Q Consensus 170 i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~--~d~~i~~wd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~ 244 (277)
+||+++++.+.. .....+.+++|+|+++++++++ .|+.|++||+.+++.... +.+|.. ....++++|++.+|+
T Consensus 288 i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~--~v~~~~~s~dg~~l~ 365 (401)
T 4aez_A 288 FWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDT--RVLYSALSPDGRILS 365 (401)
T ss_dssp EEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSS--CCCEEEECTTSSEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCC--CEEEEEECCCCCEEE
Confidence 999998765543 3456899999999999999954 899999999988765554 556643 456678899999999
Q ss_pred eecCCCeEEEEECcCccceeeec
Q 023772 245 GGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 245 sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
+|+.||.|++||+.+++.+.+..
T Consensus 366 s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 366 TAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EECTTSEEEEEECCC--------
T ss_pred EEeCCCcEEEEECCCCccccccc
Confidence 99999999999999998876654
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-39 Score=271.75 Aligned_cols=243 Identities=14% Similarity=0.168 Sum_probs=197.5
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC--eeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG--IHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
..+.|.++|++++|+|++++|++|+.|+.|++||+.++ +....+.+|...|.+++|+|++++|++++.|++|++||++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 45668899999999999999999999999999999988 7788899999999999999999999999999999999999
Q ss_pred CCc---eeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCC-cceEeecc-ccCcEEEEEecCC--eEEEee
Q 023772 91 TGR---VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHST-EPIQIIDS-FQDSVMSVCLTKT--EIIGGS 163 (277)
Q Consensus 91 ~~~---~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~-~~~~~~~~~~~~~--~~~~g~ 163 (277)
+++ ....+..|...|.+++|+|++++|++++.|+.|++||++.... .....+.. +...+..+.++++ .+++++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 877 6777888999999999999999999999999999999986542 12334444 7888988888764 599999
Q ss_pred cCCcEEEEEccCC------------------ccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCce----EE
Q 023772 164 VDGTVRTFDIRVG------------------RELSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGEL----LQ 220 (277)
Q Consensus 164 ~d~~i~i~d~~~~------------------~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~----~~ 220 (277)
.|++|++||++.. +.+.. .+...|.+++|+|++++|++++.|+.|++||+.+++. +.
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECC
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeE
Confidence 9999999998532 11111 4456799999999999999999999999999999887 77
Q ss_pred EEeccccceeeeeeEecCCCceEEeecCCCeEEEEECc
Q 023772 221 EYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~ 258 (277)
.+.+|... ...++++|++.+|++|+.|+.+ +|+..
T Consensus 246 ~~~~~~~~--v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 246 TVKLSQLP--LRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEECSSSC--EEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred eecCCCCc--eEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 78877543 4567789999999999887766 66554
No 59
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.6e-37 Score=263.53 Aligned_cols=250 Identities=22% Similarity=0.356 Sum_probs=217.0
Q ss_pred eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Q 023772 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRV 94 (277)
Q Consensus 15 ~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~ 94 (277)
.+|..+|.++.| +++++++|+.||+|++||..+++....+.+|...|.+++| ++++|++|+.||+|++||++++++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 457778998876 7899999999999999999999999999999999999999 678999999999999999999999
Q ss_pred eEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcc-eEeeccccCcEEEEEecCCeEEEeecCCcEEEEEc
Q 023772 95 IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEP-IQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDI 173 (277)
Q Consensus 95 ~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~ 173 (277)
+.++.+|...|.++.+++ ..+++|+.||.|++||++...... ......+...+.++.+++..+++|+.|+.|++||+
T Consensus 206 ~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT 283 (435)
T ss_dssp EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEET
T ss_pred EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEEC
Confidence 999999999999999974 599999999999999998654332 24566788889999999999999999999999999
Q ss_pred cCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCe
Q 023772 174 RVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGY 251 (277)
Q Consensus 174 ~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~ 251 (277)
++++.+.. .+...+.++.++ ++++++|+.|+.|++||+++++++..+.+|.... ..+. .++.++++|+.||.
T Consensus 284 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v--~~~~--~~~~~l~sg~~dg~ 357 (435)
T 1p22_A 284 STCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV--RCIR--FDNKRIVSGAYDGK 357 (435)
T ss_dssp TTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCE--EEEE--CCSSEEEEEETTSC
T ss_pred CcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcE--EEEE--ecCCEEEEEeCCCc
Confidence 98776543 345678888884 6799999999999999999999999999886443 3233 37889999999999
Q ss_pred EEEEECcCcc---------ceeeeccCcceeEee
Q 023772 252 IYFWDLVDAS---------VVAKFKAHSLVVKLL 276 (277)
Q Consensus 252 i~iwd~~~~~---------~~~~~~~h~~~v~~~ 276 (277)
|++||+.++. ++..+.+|...|..+
T Consensus 358 i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 391 (435)
T 1p22_A 358 IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL 391 (435)
T ss_dssp EEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCE
T ss_pred EEEEECCCCCCccccccchheeeccCCCCCeEEE
Confidence 9999998887 889999998877643
No 60
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.2e-37 Score=256.95 Aligned_cols=259 Identities=18% Similarity=0.309 Sum_probs=212.6
Q ss_pred ceeeccCCcEEEEEEeCC----CCEEEEEeCCCcEEEEcCCCCeeEEEEec-----cCccEEEEEEcCC----CCEEEEE
Q 023772 12 NVLKGHEGAVLAARFNGD----GNYCLSCGKDRTIRLWNPHRGIHIKTYKS-----HGREVRDVHVTAD----NSKLISC 78 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~----~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~~----~~~l~t~ 78 (277)
..+.+|.++|.+++|+|+ ...+++++.++.|++||..+++.+..+.. |...|.+++|+|+ +++|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345689999999999984 45666777777999999998877766654 5577999999998 6689999
Q ss_pred eCCCcEEEEECCCCceeEEeecccCceeEEEEec-CCCEEEEEeCCCcEEEEeCccCCCcceEee---ccccCcEEEEEe
Q 023772 79 GGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNE-YSSVVVSAGYDQSLRAWDCRSHSTEPIQII---DSFQDSVMSVCL 154 (277)
Q Consensus 79 s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~ 154 (277)
+.|+.|++||+++++.+..+.+|..+|.+++|+| +++++++++.||.|++||++... ....+ ..+...+..+.+
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~ 169 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT--LVAIFGGVEGHRDEVLSADY 169 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE--EEEEECSTTSCSSCEEEEEE
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe--EEEEecccccccCceeEEEE
Confidence 9999999999999999999999999999999999 89999999999999999997643 33344 567788888888
Q ss_pred cC--CeEEEeecCCcEEEEEccCCccccc------------------------------CCCCCeeEEEEeCCCCEEEEE
Q 023772 155 TK--TEIIGGSVDGTVRTFDIRVGRELSD------------------------------DLGQPVNCISMSNDGNCILAS 202 (277)
Q Consensus 155 ~~--~~~~~g~~d~~i~i~d~~~~~~~~~------------------------------~~~~~v~~~~~s~~~~~l~~~ 202 (277)
++ ..+++++.|+.|++||++.++.... .+...|.+++|+ +++|+++
T Consensus 170 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 170 DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK 247 (366)
T ss_dssp CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE
T ss_pred CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE
Confidence 75 4699999999999999987643211 156689999998 6799999
Q ss_pred ecCCeEEEEECCCCce--------------EEEEeccccceeeeeeEecCC--CceEEeecCCCeEEEEECcCcccee--
Q 023772 203 CLDSTLRLLDRSTGEL--------------LQEYKGHICKSFKTDCCLTNS--DAHVTGGSEDGYIYFWDLVDASVVA-- 264 (277)
Q Consensus 203 ~~d~~i~~wd~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~l~sgs~d~~i~iwd~~~~~~~~-- 264 (277)
+.|+.|++||+.+++. +..+.+|... ...++++|+ +.+|++|+.||.|++||+.+++...
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD--IWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC--SSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheeccccccCCc--EEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc
Confidence 9999999999987643 6677777543 344566777 9999999999999999999987554
Q ss_pred --eeccC--cceeEee
Q 023772 265 --KFKAH--SLVVKLL 276 (277)
Q Consensus 265 --~~~~h--~~~v~~~ 276 (277)
.+.+| ...|..+
T Consensus 326 ~~~~~~~~~~~~v~~~ 341 (366)
T 3k26_A 326 CTTLTHHKCGAAIRQT 341 (366)
T ss_dssp EEEECCTTCCSCEEEE
T ss_pred ceEEcccccCCceEEE
Confidence 78877 5666543
No 61
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=7.4e-37 Score=261.35 Aligned_cols=253 Identities=25% Similarity=0.444 Sum_probs=218.4
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.+.|.. ++.++|++|++|+.||+|++||+.+++.+..+.+|...|.++.|+ ++.+++|+.|++|++||++
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 4568899997643 345568999999999999999999999999999999999999997 5699999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecCCcEEE
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~i 170 (277)
+++++..+.+|...|.++.++ ++.+++|+.||+|++||+++.. ....+..+...+.++.+++..+++|+.|+.|++
T Consensus 188 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 188 TGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ--CLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 263 (445)
T ss_dssp TTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC--EEEEEECCSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred cCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc--EEEEEcCCcccEEEEEECCCEEEEEcCCCEEEE
Confidence 999999999999999999996 5689999999999999997643 455566788889999998889999999999999
Q ss_pred EEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecC
Q 023772 171 FDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248 (277)
Q Consensus 171 ~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 248 (277)
||+++++.+.. .+...+.++.| ++.++++++.|+.|++||+++++++..+.+|.... . ++.+++.++++|+.
T Consensus 264 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v--~--~~~~~~~~l~~~~~ 337 (445)
T 2ovr_B 264 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--S--GMELKDNILVSGNA 337 (445)
T ss_dssp EEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE--E--EEEEETTEEEEEET
T ss_pred EECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccE--E--EEEEeCCEEEEEeC
Confidence 99998775543 34567888888 78899999999999999999999999998875432 2 23446779999999
Q ss_pred CCeEEEEECcCccceeeecc---CcceeEee
Q 023772 249 DGYIYFWDLVDASVVAKFKA---HSLVVKLL 276 (277)
Q Consensus 249 d~~i~iwd~~~~~~~~~~~~---h~~~v~~~ 276 (277)
||.|++||+.+++.+..+.+ |..+|..+
T Consensus 338 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 338 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp TSCEEEEETTTCCEEEEECSTTSCSSCEEEE
T ss_pred CCeEEEEECCCCcEEEEEccCCCCCCCEEEE
Confidence 99999999999999999987 77777653
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3e-36 Score=247.44 Aligned_cols=237 Identities=17% Similarity=0.311 Sum_probs=205.6
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe--eEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI--HIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR 93 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~ 93 (277)
+|.++|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...|.+++|+|+++++++++.|+.|++||+++++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 799999999999999999999999999999998876 567788899999999999999999999999999999999999
Q ss_pred eeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecCCcEEEE
Q 023772 94 VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTF 171 (277)
Q Consensus 94 ~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i~i~ 171 (277)
.+..+..|...|.+++|+|+++.+++++.|+.|++||++.... .... .+...+..+.+++ ..+++++.|+.|++|
T Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~ 251 (337)
T 1gxr_A 175 LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ--LQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVL 251 (337)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce--Eeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence 9999999999999999999999999999999999999976532 2222 3456677777765 468999999999999
Q ss_pred EccCCcccc-cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCC
Q 023772 172 DIRVGRELS-DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDG 250 (277)
Q Consensus 172 d~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~ 250 (277)
|++.++... ..+..++.+++|+|++++|++++.|+.|++||+.+++.+.... |. .....++++|++.++++++.||
T Consensus 252 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~--~~v~~~~~s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 252 HVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ES--SSVLSCDISVDDKYIVTGSGDK 328 (337)
T ss_dssp ETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CS--SCEEEEEECTTSCEEEEEETTS
T ss_pred ECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec-CC--CcEEEEEECCCCCEEEEecCCC
Confidence 998776443 2456789999999999999999999999999999988875543 32 3355678899999999999999
Q ss_pred eEEEEECc
Q 023772 251 YIYFWDLV 258 (277)
Q Consensus 251 ~i~iwd~~ 258 (277)
.|++||+.
T Consensus 329 ~i~iw~~~ 336 (337)
T 1gxr_A 329 KATVYEVI 336 (337)
T ss_dssp CEEEEEEE
T ss_pred eEEEEEEe
Confidence 99999973
No 63
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-38 Score=285.49 Aligned_cols=248 Identities=17% Similarity=0.239 Sum_probs=208.9
Q ss_pred ceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCC--CCeeEEEEeccCccEEEEEEcCC--CCEEEEEeCCCcEEEE
Q 023772 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPH--RGIHIKTYKSHGREVRDVHVTAD--NSKLISCGGDRQIFYW 87 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~t~s~d~~v~~w 87 (277)
.++.+|.++|++++|+|+++++++|+.||+|++||+. ++.....+.+|.++|++++|+++ +++|++|+.||+|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4678999999999999999999999999999999987 55778889999999999999988 8999999999999999
Q ss_pred ECCCCc--eeEEeecccCceeEEEEecC--CCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC-------
Q 023772 88 DVSTGR--VIRKFRGHESEVNAVKFNEY--SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK------- 156 (277)
Q Consensus 88 d~~~~~--~~~~~~~h~~~v~~i~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------- 156 (277)
|+.+++ .+..+..|..+|.++.|+|+ ++.+++|+.||+|++||++............+...+.++.+.+
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 999886 67788899999999999999 9999999999999999998765555556677888888888876
Q ss_pred --------CeEEEeecCCcEEEEEccCCccc------ccCCCCCeeEEEEeCC---CCEEEEEecCCeEEEEECCCCc--
Q 023772 157 --------TEIIGGSVDGTVRTFDIRVGREL------SDDLGQPVNCISMSND---GNCILASCLDSTLRLLDRSTGE-- 217 (277)
Q Consensus 157 --------~~~~~g~~d~~i~i~d~~~~~~~------~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~~wd~~~~~-- 217 (277)
..+++|+.||.|++||++.+... ...+..+|.+++|+|+ +++|++++.||.|++||+.+++
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence 35999999999999999876421 1245678999999999 8999999999999999998764
Q ss_pred ---eEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCcc
Q 023772 218 ---LLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDAS 261 (277)
Q Consensus 218 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~ 261 (277)
.......| ......++++|++.++++|+.||.|++||+.++.
T Consensus 243 ~~~~~~~~~~~--~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 243 WKKTLLKEEKF--PDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CBCCBSSSSCC--SSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred ceeEEeccCCC--CCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 22222223 2344567889999999999999999999998643
No 64
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=256.09 Aligned_cols=255 Identities=22% Similarity=0.307 Sum_probs=204.5
Q ss_pred ccceeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCeeEEEEe-------------ccCccEEEEEEcC-CCCE
Q 023772 10 EANVLKGHEGAVLAARFNG-DGNYCLSCGKDRTIRLWNPHRGIHIKTYK-------------SHGREVRDVHVTA-DNSK 74 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-------------~h~~~v~~~~~~~-~~~~ 74 (277)
....+.+|.++|++++|+| ++++|++|+.||.|++||+.++.....+. +|...|.+++|+| ++.+
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 3456789999999999999 99999999999999999998775544432 5899999999999 7789
Q ss_pred EEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecC---CCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEE
Q 023772 75 LISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEY---SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMS 151 (277)
Q Consensus 75 l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 151 (277)
|++++.|+.|++||+.+++.+..+. +...+.++.+.+. +.++++++.|+.|++||++... ....+..+...+..
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS--CSHILQGHRQEILA 191 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC--CCEEECCCCSCEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc--eeeeecCCCCcEEE
Confidence 9999999999999999999888776 7888999999885 4499999999999999998653 34556677888888
Q ss_pred EEecCC---eEEEeecCCcEEEEEccCCcccc------------------cCCCCCeeEEEEeCCCCEEEEEecCCeEEE
Q 023772 152 VCLTKT---EIIGGSVDGTVRTFDIRVGRELS------------------DDLGQPVNCISMSNDGNCILASCLDSTLRL 210 (277)
Q Consensus 152 ~~~~~~---~~~~g~~d~~i~i~d~~~~~~~~------------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~ 210 (277)
+.+.+. .+++|+.||.|++||++...... ..+...|.+++|+|++++|++++.|+.|++
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE
Confidence 888765 38899999999999997654110 234567999999999999999999999999
Q ss_pred EECCCCc-----------------------------------------------eEEEEeccccceeeeeeEecCCCceE
Q 023772 211 LDRSTGE-----------------------------------------------LLQEYKGHICKSFKTDCCLTNSDAHV 243 (277)
Q Consensus 211 wd~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (277)
||+.+++ ++..+.+|.. .+..++++|++.+|
T Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l 349 (408)
T 4a11_B 272 WNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK--TVDCCVFQSNFQEL 349 (408)
T ss_dssp EETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS--CEEEEEEETTTTEE
T ss_pred EECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC--eEEEEEEcCCCCEE
Confidence 9986543 3444555543 34567889999999
Q ss_pred EeecCCCeEEEEECcCccceeeeccC
Q 023772 244 TGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 244 ~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
++|+.||.|++||+.+++.+.....+
T Consensus 350 ~s~~~dg~i~iw~~~~~~~~~~~~~~ 375 (408)
T 4a11_B 350 YSGSRDCNILAWVPSLYEPVPDDDET 375 (408)
T ss_dssp EEEETTSCEEEEEECC----------
T ss_pred EEECCCCeEEEEeCCCCCccCCCCce
Confidence 99999999999999999887665443
No 65
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.7e-37 Score=256.97 Aligned_cols=239 Identities=14% Similarity=0.186 Sum_probs=196.8
Q ss_pred eccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCeeEEEEecc---CccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 15 KGHEGAVLAARFNG-DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH---GREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 15 ~~H~~~V~~~~~~~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
.+|.++|.+++|+| ++++|++++.|+.|++||+.. .....+..| ...|.+++|+|++++|++++.|+.|++||+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~- 192 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL- 192 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-
Confidence 47999999999999 789999999999999999986 455566544 378999999999999999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCC--cceEeeccccCcEEEEEecC---CeEEEeec
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHST--EPIQIIDSFQDSVMSVCLTK---TEIIGGSV 164 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~g~~ 164 (277)
+++.+..+..|...|.+++|+|+++ ++++++.|++|++||++.... ...... .+...+..+.+++ ..+++++.
T Consensus 193 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 193 DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 5778889999999999999999998 999999999999999986432 222223 5778888888876 56999999
Q ss_pred CCcEEEEEccCCcccccC---------CC----------CCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEecc
Q 023772 165 DGTVRTFDIRVGRELSDD---------LG----------QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH 225 (277)
Q Consensus 165 d~~i~i~d~~~~~~~~~~---------~~----------~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 225 (277)
|+.|++||+++++..... +. ..+..++|+|++++ +++.|+.|++||+.+++++..+.++
T Consensus 272 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 272 RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBT
T ss_pred CCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCC
Confidence 999999999876543211 11 23444667777765 7789999999999999999999876
Q ss_pred ccceeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 226 ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
........++++|++.+|++|+ |+.|++||+++
T Consensus 350 ~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 350 NAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 4344445458999999999997 99999999874
No 66
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=255.68 Aligned_cols=244 Identities=13% Similarity=0.167 Sum_probs=203.1
Q ss_pred eeccCCcEEEEEEeCC---CCEEEEEeCCCcEEEEcCCCCe-eEEEEeccCccEEEEEE------cCCCCEEEEEeCCCc
Q 023772 14 LKGHEGAVLAARFNGD---GNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHV------TADNSKLISCGGDRQ 83 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~---~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~h~~~v~~~~~------~~~~~~l~t~s~d~~ 83 (277)
..+|.++|.+++|+|+ +++|++|+.|+.|++||+.+++ .+..+.+|...|.++.| +|++++|++++.|+.
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 3479999999999998 7999999999999999999887 88899999999999965 678999999999999
Q ss_pred EEEEECCCCc-eeEEeecccC----ceeEEE----EecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEe
Q 023772 84 IFYWDVSTGR-VIRKFRGHES----EVNAVK----FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL 154 (277)
Q Consensus 84 v~~wd~~~~~-~~~~~~~h~~----~v~~i~----~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
|++||+.+++ ++..+..|.. .+.++. |+++++++++++.|+.|++||++.... .....+...+..+.+
T Consensus 141 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~ 217 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWETNIKNGVCSLEF 217 (357)
T ss_dssp EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEEEECSSCEEEEEE
T ss_pred EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce---eeecCCCCceEEEEc
Confidence 9999999886 6777776654 888888 678999999999999999999986542 233456677888888
Q ss_pred cC-----CeEEEeecCCcEEEEEccCCccccc-------CCCCCeeEEEEeCCCC-EEEEEecCCeEEEEECCCC-----
Q 023772 155 TK-----TEIIGGSVDGTVRTFDIRVGRELSD-------DLGQPVNCISMSNDGN-CILASCLDSTLRLLDRSTG----- 216 (277)
Q Consensus 155 ~~-----~~~~~g~~d~~i~i~d~~~~~~~~~-------~~~~~v~~~~~s~~~~-~l~~~~~d~~i~~wd~~~~----- 216 (277)
++ ..+++++.|+.|++||++.++.... .+...|.+++|+|++. +|++++.||.|++||++++
T Consensus 218 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 297 (357)
T 3i2n_A 218 DRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSK 297 (357)
T ss_dssp SCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--
T ss_pred CCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccc
Confidence 75 5699999999999999987654322 4567899999999998 8999999999999998753
Q ss_pred --------------ceEEEEeccccceeeeeeEecCCCceEE-eecCCCeEEEEECcCccc
Q 023772 217 --------------ELLQEYKGHICKSFKTDCCLTNSDAHVT-GGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 217 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sgs~d~~i~iwd~~~~~~ 262 (277)
+++..+.+|.. .+..++++|++.+++ +|+.||.|++||+.+.+.
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 298 KDSEGIEMGVAGSVSLLQNVTLSTQ--PISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CCTTSCCCCCCCEEEEEEEEECCSS--CEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccCCCCccccccccceeeccccCCC--CeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 35667777743 356678899999998 899999999999988764
No 67
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-37 Score=260.59 Aligned_cols=247 Identities=15% Similarity=0.211 Sum_probs=210.3
Q ss_pred eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCC----CeeEEEEeccCccEEEEEEcCC-CCEEEEEeCCCcEEEEEC
Q 023772 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR----GIHIKTYKSHGREVRDVHVTAD-NSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 15 ~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~s~d~~v~~wd~ 89 (277)
..|.++|.+++|+|++++|++++.|+.|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 46999999999999999999999999999999987 4578889999999999999998 899999999999999999
Q ss_pred CCCc------eeE---EeecccCceeEEEEecC-CCEEEEEeCCCcEEEEeCccCCCcceEeeccc------cCcEEEEE
Q 023772 90 STGR------VIR---KFRGHESEVNAVKFNEY-SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSF------QDSVMSVC 153 (277)
Q Consensus 90 ~~~~------~~~---~~~~h~~~v~~i~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~ 153 (277)
.+++ ... .+..|...|.+++|+|+ +.++++++.|+.|++||++... ....+..+ ...+..+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK--EVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE--EEEEECCCCCSSCCCCCEEEEE
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC--cceEEeccccccccCCceEEEE
Confidence 9876 332 34679999999999999 7899999999999999997643 23333333 56788888
Q ss_pred ecCC---eEEEeecCC---cEEEEEccCCcc-cc--c-CCCCCeeEEEEeC-CCCEEEEEecCCeEEEEECCCCceEEEE
Q 023772 154 LTKT---EIIGGSVDG---TVRTFDIRVGRE-LS--D-DLGQPVNCISMSN-DGNCILASCLDSTLRLLDRSTGELLQEY 222 (277)
Q Consensus 154 ~~~~---~~~~g~~d~---~i~i~d~~~~~~-~~--~-~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 222 (277)
+++. .+++++.|+ .|++||++.+.. .. . .+...+.+++|+| ++.+|++++.|+.|++||+++++++..+
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee
Confidence 8764 588999998 999999998632 22 2 3556899999999 8999999999999999999999999999
Q ss_pred eccccceeeeeeEecCCC-ceEEeecCCCeEEEEECcCccceee
Q 023772 223 KGHICKSFKTDCCLTNSD-AHVTGGSEDGYIYFWDLVDASVVAK 265 (277)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~-~~l~sgs~d~~i~iwd~~~~~~~~~ 265 (277)
.+|... ...++++|++ .++++++.|+.|++||+.++.....
T Consensus 302 ~~~~~~--v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 343 (416)
T 2pm9_A 302 PARGNW--CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLD 343 (416)
T ss_dssp ECSSSC--CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSC
T ss_pred cCCCCc--eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcc
Confidence 888543 4567789998 8999999999999999998775543
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-36 Score=256.04 Aligned_cols=239 Identities=20% Similarity=0.335 Sum_probs=207.6
Q ss_pred cCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeE
Q 023772 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~ 96 (277)
|.++|.+++|+|++++|++++.|+.|++|| .++..+..+..|..+|.+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 788999999999999999999999999999 6778889999999999999999999999999999999999998765433
Q ss_pred --------------------------------------------------------EeecccCceeEEEEecCCCEEEEE
Q 023772 97 --------------------------------------------------------KFRGHESEVNAVKFNEYSSVVVSA 120 (277)
Q Consensus 97 --------------------------------------------------------~~~~h~~~v~~i~~~~~~~~l~s~ 120 (277)
.+..|..+|.+++|+|++++++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 344678889999999999999999
Q ss_pred eCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC-eEEEeecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCC
Q 023772 121 GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-EIIGGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGN 197 (277)
Q Consensus 121 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~ 197 (277)
+.|+.|++||++... ....+..+...+..+.+.+. .+++++.|+.|++||+++++.+.. .+..++.+++|+|+++
T Consensus 266 ~~d~~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~ 343 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGN--SQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQ 343 (425)
T ss_dssp ETTSCEEEECSSSBS--CSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSS
T ss_pred cCCCEEEEEECCCCc--cceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCC
Confidence 999999999987643 34455667778888888765 689999999999999988765543 3467899999999999
Q ss_pred EEEEEecCCeEEEEECCCCc--------------------eEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEEC
Q 023772 198 CILASCLDSTLRLLDRSTGE--------------------LLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257 (277)
Q Consensus 198 ~l~~~~~d~~i~~wd~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~ 257 (277)
+|++++.|+.|++||+.+++ ++..+.+|........++++|++++|++|+.||.|++||+
T Consensus 344 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 344 KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp EEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred EEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 99999999999999999888 8888888754214567789999999999999999999998
Q ss_pred c
Q 023772 258 V 258 (277)
Q Consensus 258 ~ 258 (277)
+
T Consensus 424 ~ 424 (425)
T 1r5m_A 424 P 424 (425)
T ss_dssp C
T ss_pred c
Confidence 5
No 69
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.4e-37 Score=260.04 Aligned_cols=247 Identities=11% Similarity=0.126 Sum_probs=209.3
Q ss_pred ccceeeccCCcEEEEEEeCC----C---CEEEEEeCCCcEEEEcCCCCee-----EEEEecc-----CccEEEEEEc---
Q 023772 10 EANVLKGHEGAVLAARFNGD----G---NYCLSCGKDRTIRLWNPHRGIH-----IKTYKSH-----GREVRDVHVT--- 69 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~----~---~~l~s~s~d~~v~iwd~~~~~~-----~~~~~~h-----~~~v~~~~~~--- 69 (277)
....+.+|..+|.+++|+|+ + ++|++++.|+.|++||+.+++. ...+..| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 35667899999999999999 9 9999999999999999988876 8888888 5899999999
Q ss_pred -CCCCE-EEEEeCCCcEEEEECCC------CceeE-----Eee-------cccCceeEEEEecCCCEEEEEeCCCcEEEE
Q 023772 70 -ADNSK-LISCGGDRQIFYWDVST------GRVIR-----KFR-------GHESEVNAVKFNEYSSVVVSAGYDQSLRAW 129 (277)
Q Consensus 70 -~~~~~-l~t~s~d~~v~~wd~~~------~~~~~-----~~~-------~h~~~v~~i~~~~~~~~l~s~~~d~~i~iw 129 (277)
|++++ |++++.|+.|++||+.+ ++.+. .+. .|...|.+++|+|++ ++++++.|+.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999998 76666 774 489999999999999 99999999999999
Q ss_pred eCccCCCcceEeecc---c---cCcEEEEEecC--CeEEEeecC---CcEEEEEccCCccccc--C-------------C
Q 023772 130 DCRSHSTEPIQIIDS---F---QDSVMSVCLTK--TEIIGGSVD---GTVRTFDIRVGRELSD--D-------------L 183 (277)
Q Consensus 130 d~~~~~~~~~~~~~~---~---~~~~~~~~~~~--~~~~~g~~d---~~i~i~d~~~~~~~~~--~-------------~ 183 (277)
|++.. .....+.. + ...+..+.+++ ..+++++.| +.|++||+++++.+.. . +
T Consensus 213 d~~~~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (397)
T 1sq9_A 213 ELSTL--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 290 (397)
T ss_dssp ETTTT--EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB
T ss_pred ECCCC--ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccccc
Confidence 99864 34444555 6 77788888764 569999999 9999999988765432 2 5
Q ss_pred CCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe------cc---------------ccceeeeeeEecCCC--
Q 023772 184 GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK------GH---------------ICKSFKTDCCLTNSD-- 240 (277)
Q Consensus 184 ~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~------~~---------------~~~~~~~~~~~~~~~-- 240 (277)
...|.+++|+|++++|++++.|+.|++||+++++++..+. +| . ..+..++++|++
T Consensus 291 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~v~~~~~~~~g~~ 368 (397)
T 1sq9_A 291 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE--PGVFDVKFLKKGWR 368 (397)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSS--CCEEEEEEECTTTS
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccC--CceeEEEecccccc
Confidence 6789999999999999999999999999999999999998 55 3 335667789988
Q ss_pred --------ceEEeecCCCeEEEEECcCcc
Q 023772 241 --------AHVTGGSEDGYIYFWDLVDAS 261 (277)
Q Consensus 241 --------~~l~sgs~d~~i~iwd~~~~~ 261 (277)
.++++|+.||.|++||+.+|+
T Consensus 369 ~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 369 SGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp BSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998874
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.5e-36 Score=258.31 Aligned_cols=256 Identities=21% Similarity=0.378 Sum_probs=215.1
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEc--CCCCEEEEEeCCCcEEEE
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT--ADNSKLISCGGDRQIFYW 87 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~t~s~d~~v~~w 87 (277)
....+.+|.++|.+++|++++ ++++|+.|++|++||+.+++.+..+.+|..+|.+++|. ++++++++++.|++|++|
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vw 232 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 232 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEE
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEe
Confidence 345678999999999999988 99999999999999999999999999999999999998 577899999999999999
Q ss_pred ECCCCce-----------------------eEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeecc
Q 023772 88 DVSTGRV-----------------------IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDS 144 (277)
Q Consensus 88 d~~~~~~-----------------------~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 144 (277)
|+.++.. +..+.+|...|.++ .++++++++++.|+.|++||+++. .....+..
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~--~~~~~~~~ 308 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM--KCLYILSG 308 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT--EEEEEECC
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC--cEEEEecC
Confidence 9987652 45677898888876 567889999999999999999764 34556667
Q ss_pred ccCcEEEEEecC--CeEEEeecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEE
Q 023772 145 FQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220 (277)
Q Consensus 145 ~~~~~~~~~~~~--~~~~~g~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~ 220 (277)
+...+..+.+++ ..+++|+.|+.|++||+++++.+.. .+...|.++.|+ +.+|++++.||.|++||+.+++...
T Consensus 309 ~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 309 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceee
Confidence 788888888765 4699999999999999998876543 356689999997 5789999999999999999887665
Q ss_pred EEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceee-eccCcceeEee
Q 023772 221 EYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAK-FKAHSLVVKLL 276 (277)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~-~~~h~~~v~~~ 276 (277)
.+... ......++++++.++++|+ ||.|++||+.+++++.+ +..|...|..+
T Consensus 387 ~~~~~---~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v 439 (464)
T 3v7d_B 387 SYHHT---NLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSV 439 (464)
T ss_dssp EEECT---TCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEE
T ss_pred eecCC---CCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEE
Confidence 55322 2234456889999999998 99999999999999986 66787777643
No 71
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.3e-36 Score=256.07 Aligned_cols=254 Identities=26% Similarity=0.466 Sum_probs=216.6
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.++|.++.|+ ++++++|+.|++|++||+.+++.+..+.+|...|.++.++ ++.+++|+.|++|++||++
T Consensus 152 ~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~ 227 (445)
T 2ovr_B 152 LRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE 227 (445)
T ss_dssp EEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESS
T ss_pred EEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECC
Confidence 45678999999999998 5699999999999999999999999999999999999996 5689999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecCCcEEE
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRT 170 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~i 170 (277)
+++++..+.+|..+|.++.+ +++.+++++.||.|++||++.. .....+..+...+.++.+++..+++|+.|+.|++
T Consensus 228 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i 303 (445)
T 2ovr_B 228 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRV 303 (445)
T ss_dssp SCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT--EEEEEECCCSSCEEEEEECSSEEEEEETTSCEEE
T ss_pred CCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC--cEeEEecCCCCceEEEEECCCEEEEEeCCCeEEE
Confidence 99999999999999999998 6789999999999999998764 3455566788889999998899999999999999
Q ss_pred EEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccc-cceeeeeeEecCCCceEEeec
Q 023772 171 FDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI-CKSFKTDCCLTNSDAHVTGGS 247 (277)
Q Consensus 171 ~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~sgs 247 (277)
||+++++.+.. .+...+.++.+ +++++++++.||.|++||+++++.+..+.++. .......+.+ ++.++++|+
T Consensus 304 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~ 379 (445)
T 2ovr_B 304 WDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSS 379 (445)
T ss_dssp EETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEE
T ss_pred EECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE--CCCEEEEEe
Confidence 99998876544 33456666666 46799999999999999999999999888632 1222333334 578999999
Q ss_pred CCCeEEEEECcCccceeee-----ccCcceeEee
Q 023772 248 EDGYIYFWDLVDASVVAKF-----KAHSLVVKLL 276 (277)
Q Consensus 248 ~d~~i~iwd~~~~~~~~~~-----~~h~~~v~~~ 276 (277)
.||.|++||+.+++.+..+ .+|...|..+
T Consensus 380 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 413 (445)
T 2ovr_B 380 DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 413 (445)
T ss_dssp TTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEE
T ss_pred CCCeEEEEECCCCceeeeeeccccCCCCceEEEE
Confidence 9999999999999999888 4677766543
No 72
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.4e-38 Score=267.21 Aligned_cols=252 Identities=16% Similarity=0.207 Sum_probs=209.4
Q ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEee
Q 023772 20 AVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFR 99 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~ 99 (277)
.+++++|+|++++|++++.|+.+++||..+++....+..| ..+....+++++++|++++.|+.|++||++++++...+.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 3457999999999999999999999999887766666665 455566789999999999999999999999999988888
Q ss_pred cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecCCcEEEEEccCCc
Q 023772 100 GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGR 177 (277)
Q Consensus 100 ~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i~i~d~~~~~ 177 (277)
+|...|.+++|+|++++|++++.|++|++||++... ....+..|...+.++.+++ ..+++++.|++|++||+++++
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 999999999999999999999999999999998654 3455667888888888865 469999999999999998876
Q ss_pred ccccC-----C---------------------CCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEec-ccccee
Q 023772 178 ELSDD-----L---------------------GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG-HICKSF 230 (277)
Q Consensus 178 ~~~~~-----~---------------------~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~ 230 (277)
.+... . ..++.+++|+|++++|++++.||.|++||+++++.+..+.. |. ..
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~ 292 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT--CS 292 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS--SC
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC--CC
Confidence 54321 1 23445556689999999999999999999999888777654 43 34
Q ss_pred eeeeEecCCCc-eEEeecCCCeEEEEECcCccc-eeeecc-CcceeEee
Q 023772 231 KTDCCLTNSDA-HVTGGSEDGYIYFWDLVDASV-VAKFKA-HSLVVKLL 276 (277)
Q Consensus 231 ~~~~~~~~~~~-~l~sgs~d~~i~iwd~~~~~~-~~~~~~-h~~~v~~~ 276 (277)
...++++|++. ++++|+.||.|++||+.+++. +..+.+ |..+|..+
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 341 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV 341 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE
Confidence 56677899998 999999999999999999754 788886 56666553
No 73
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-36 Score=250.29 Aligned_cols=255 Identities=18% Similarity=0.298 Sum_probs=220.2
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCC-----CcE
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGD-----RQI 84 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d-----~~v 84 (277)
....+.+|.++|.+++|+|++++|++++.|+.|++||+.+++.+..+. |..++.+++|+|+++++++++.+ +.|
T Consensus 66 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 66 RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEE
T ss_pred hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEE
Confidence 345678999999999999999999999999999999999999988888 88899999999999999999999 999
Q ss_pred EEEECCCCc-----------eeEEeecccC--ceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEE
Q 023772 85 FYWDVSTGR-----------VIRKFRGHES--EVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMS 151 (277)
Q Consensus 85 ~~wd~~~~~-----------~~~~~~~h~~--~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 151 (277)
++||+..+. .+..+..|.. .+.+++|+|+++.+++++.||.|++||++.. ......+..+...+..
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN-YEYVDSIDLHEKSISD 223 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTT-TEEEEEEECCSSCEEE
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCC-cEeEEEEecCCCceeE
Confidence 999997653 3445556666 9999999999999999999999999999763 2345556667788888
Q ss_pred EEecC--CeEEEeecCCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCC--------------eEEEEECC
Q 023772 152 VCLTK--TEIIGGSVDGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDS--------------TLRLLDRS 214 (277)
Q Consensus 152 ~~~~~--~~~~~g~~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~--------------~i~~wd~~ 214 (277)
+.+++ ..+++++.|+.|++||+++++.+.. ....++.+++|+|+++++++++.++ .+++||..
T Consensus 224 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 224 MQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred EEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 88865 4599999999999999998765443 3567899999999999999999988 89999999
Q ss_pred CCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeecc
Q 023772 215 TGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~ 268 (277)
+++.+..+.+|.. ....++++|++.+|++|+.||.|++|+++++....++..
T Consensus 304 ~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 355 (369)
T 3zwl_B 304 FEEEIGRVQGHFG--PLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYDV 355 (369)
T ss_dssp TCCEEEEEECCSS--CEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCCHH
T ss_pred CCcchhheecccC--cEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHHHH
Confidence 9999999998854 346677899999999999999999999999877666654
No 74
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=242.33 Aligned_cols=244 Identities=19% Similarity=0.305 Sum_probs=205.3
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG- 92 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~- 92 (277)
+.+|...|++++|+|++++|++|+.|++|++||+.+++.+..+.+|...+.++.+ ++..+++++.++.+++|+...+
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~ 140 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE 140 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc
Confidence 3478889999999999999999999999999999999999999999988877665 4678999999999999999875
Q ss_pred ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc--ceEeeccccCcEEEEEecCC---e--EEEeecC
Q 023772 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE--PIQIIDSFQDSVMSVCLTKT---E--IIGGSVD 165 (277)
Q Consensus 93 ~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~--~~~g~~d 165 (277)
..+..+.+|...+..+.+.++++++++++.|++|++||++..... .......+...+..+.+.+. . +++++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 141 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 456778899999999999999999999999999999999765432 22334445566777666543 2 3467788
Q ss_pred CcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEe--cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCce
Q 023772 166 GTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASC--LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242 (277)
Q Consensus 166 ~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (277)
++|++||.+....... .....+..+.|+|++..+++++ .|+.|++||+++++++..+.+|... +..++++|++.+
T Consensus 221 ~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~--V~~l~~spdg~~ 298 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR--VLSLTMSPDGAT 298 (318)
T ss_dssp CEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC--EEEEEECTTSSC
T ss_pred CEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcCCCCE
Confidence 9999999987765433 3456799999999999888765 7999999999999999999999654 566789999999
Q ss_pred EEeecCCCeEEEEECcCcc
Q 023772 243 VTGGSEDGYIYFWDLVDAS 261 (277)
Q Consensus 243 l~sgs~d~~i~iwd~~~~~ 261 (277)
|++|+.||+|++||+.+..
T Consensus 299 l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 299 VASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEETTTEEEEECCSCCC
T ss_pred EEEEecCCeEEEEECCCCC
Confidence 9999999999999997654
No 75
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.5e-36 Score=245.28 Aligned_cols=248 Identities=21% Similarity=0.372 Sum_probs=208.8
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+++|.++|.+++|+|++++|++++.|+.+++|+............+...+..+.+.+++++|++++.|+.+++||+.
T Consensus 79 ~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~ 158 (340)
T 4aow_A 79 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL 158 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred eEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeC
Confidence 45678999999999999999999999999999999999999888888899999999999999999999999999999997
Q ss_pred CCce-eEEeecccCceeEEEEecCC--CEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecC
Q 023772 91 TGRV-IRKFRGHESEVNAVKFNEYS--SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVD 165 (277)
Q Consensus 91 ~~~~-~~~~~~h~~~v~~i~~~~~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d 165 (277)
.... .....+|...+..+.+.+++ .++++++.|+.|++||++... ....+..+...+.++.+++ ..+++|+.|
T Consensus 159 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 236 (340)
T 4aow_A 159 GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK--LKTNHIGHTGYLNTVTVSPDGSLCASGGKD 236 (340)
T ss_dssp SCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc--eeeEecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 6544 34567899999999998764 578999999999999997643 4455667788888888875 459999999
Q ss_pred CcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccc-------cceeeeeeEec
Q 023772 166 GTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI-------CKSFKTDCCLT 237 (277)
Q Consensus 166 ~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-------~~~~~~~~~~~ 237 (277)
++|++||++..+.+.. .....+.++.|+|++. +++++.|+.|++||++++..+..+..+. ....+..++++
T Consensus 237 g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 315 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDGGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWS 315 (340)
T ss_dssp CEEEEEETTTTEEEEEEECSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEEC
T ss_pred CeEEEEEeccCceeeeecCCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEEC
Confidence 9999999998776543 3446899999999876 5677789999999999888777665321 12345667899
Q ss_pred CCCceEEeecCCCeEEEEECcCcc
Q 023772 238 NSDAHVTGGSEDGYIYFWDLVDAS 261 (277)
Q Consensus 238 ~~~~~l~sgs~d~~i~iwd~~~~~ 261 (277)
|++++|++|+.||.|++||+.+|+
T Consensus 316 ~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 316 ADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCCEEEEEeCCCEEEEEeCCCcC
Confidence 999999999999999999999985
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.8e-36 Score=286.69 Aligned_cols=261 Identities=26% Similarity=0.429 Sum_probs=228.9
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.+.|++++|+|+|+++++|+.||+|++||..+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEeecccCceeEEEEec--CCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecCC
Q 023772 91 TGRVIRKFRGHESEVNAVKFNE--YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDG 166 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~ 166 (277)
+++++.++.+|..+|.++.|++ +..++++++.|+.|++||+++.. ....+..|...+..+.+++ ..+++++.||
T Consensus 688 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 9999999999999999999999 55689999999999999997653 4555667888888888765 4599999999
Q ss_pred cEEEEEccCCccccc---------------CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe-cccccee
Q 023772 167 TVRTFDIRVGRELSD---------------DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK-GHICKSF 230 (277)
Q Consensus 167 ~i~i~d~~~~~~~~~---------------~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~ 230 (277)
+|++||++.++.... .....+.+++|+|+|+.+++++ ++.+++||..++..+..+. +|. ..
T Consensus 766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~--~~ 842 (1249)
T 3sfz_A 766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHH--ST 842 (1249)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSS--SC
T ss_pred eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCCC--Cc
Confidence 999999987653221 1123688999999999988876 7899999999998887765 453 33
Q ss_pred eeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 231 KTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 231 ~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
...++++|++.++++|+.||.|++||+.++..+..+++|...|..+
T Consensus 843 v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v 888 (1249)
T 3sfz_A 843 IQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGV 888 (1249)
T ss_dssp CCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEE
Confidence 4567889999999999999999999999999999999999887654
No 77
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-38 Score=264.95 Aligned_cols=256 Identities=15% Similarity=0.214 Sum_probs=214.0
Q ss_pred cCCcEEEEEEeCCCC-EEEEE----------eCCCcEEEEcCCCCe---eEEEEeccCccEEEEEEcCCCCEEEEEeCCC
Q 023772 17 HEGAVLAARFNGDGN-YCLSC----------GKDRTIRLWNPHRGI---HIKTYKSHGREVRDVHVTADNSKLISCGGDR 82 (277)
Q Consensus 17 H~~~V~~~~~~~~~~-~l~s~----------s~d~~v~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~ 82 (277)
+...|.+++|+|+++ +++++ +.|+.|++||+.++. .+..+ .|...|.+++|+|++++|++++.|+
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 456788999999987 99999 899999999998775 33334 5888999999999999999999999
Q ss_pred cEEEEECCC----CceeEEeecccCceeEEEEecC-CCEEEEEeCCCcEEEEeCccCC------Cc-ceEeeccccCcEE
Q 023772 83 QIFYWDVST----GRVIRKFRGHESEVNAVKFNEY-SSVVVSAGYDQSLRAWDCRSHS------TE-PIQIIDSFQDSVM 150 (277)
Q Consensus 83 ~v~~wd~~~----~~~~~~~~~h~~~v~~i~~~~~-~~~l~s~~~d~~i~iwd~~~~~------~~-~~~~~~~~~~~~~ 150 (277)
.|++||+.+ .+.+..+.+|..+|.+++|+|+ ++++++++.|+.|++||++... .. .......+...+.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 999999987 4578889999999999999998 8999999999999999998654 11 1112345667777
Q ss_pred EEEecCC---eEEEeecCCcEEEEEccCCccccc--CC------CCCeeEEEEeCCC-CEEEEEecCC---eEEEEECCC
Q 023772 151 SVCLTKT---EIIGGSVDGTVRTFDIRVGRELSD--DL------GQPVNCISMSNDG-NCILASCLDS---TLRLLDRST 215 (277)
Q Consensus 151 ~~~~~~~---~~~~g~~d~~i~i~d~~~~~~~~~--~~------~~~v~~~~~s~~~-~~l~~~~~d~---~i~~wd~~~ 215 (277)
.+.+++. .+++++.|+.|++||++.++.+.. .. ...+.+++|+|++ .++++++.|+ .|++||+++
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 8887754 589999999999999998765432 12 5689999999997 6899999998 999999998
Q ss_pred C-ceEEEEe-ccccceeeeeeEecC-CCceEEeecCCCeEEEEECcCccceeeeccCcceeEe
Q 023772 216 G-ELLQEYK-GHICKSFKTDCCLTN-SDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKL 275 (277)
Q Consensus 216 ~-~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~ 275 (277)
+ +++..+. +|.. ....++++| ++.++++|+.|+.|++||+.+++.+..+++|...|..
T Consensus 250 ~~~~~~~~~~~~~~--~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~ 310 (416)
T 2pm9_A 250 ANTPLQTLNQGHQK--GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFK 310 (416)
T ss_dssp TTSCSBCCCSCCSS--CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCC
T ss_pred CCCCcEEeecCccC--ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEE
Confidence 6 5666776 6753 345667888 8999999999999999999999999999999877654
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.5e-36 Score=251.44 Aligned_cols=250 Identities=19% Similarity=0.213 Sum_probs=202.2
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEE--EeccCccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKT--YKSHGREVRDVHVTADNSKLISCGGDRQIFYW 87 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~w 87 (277)
....+.+|.++|.+++|+|++++|++++.|+.|++||+.+++.... +..|...|.+++|+|++++|++++.|+.|++|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 4566789999999999999999999999999999999988875444 46788999999999999999999999999999
Q ss_pred ECCCCce----eEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCcc----------------CCCcceEeeccccC
Q 023772 88 DVSTGRV----IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS----------------HSTEPIQIIDSFQD 147 (277)
Q Consensus 88 d~~~~~~----~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~----------------~~~~~~~~~~~~~~ 147 (277)
|++.++. ......|...|.+++|+|+++++++++.|+.|++||++. ........+..+..
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 203 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC
Confidence 9988762 233367899999999999999999999999999999752 12234445556777
Q ss_pred cEEEEEecCC--eEEEeecCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCC--Cce--E
Q 023772 148 SVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRST--GEL--L 219 (277)
Q Consensus 148 ~~~~~~~~~~--~~~~g~~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~--~~~--~ 219 (277)
.+..+.++++ .+++++.|+.|++||+++++.+.. .+..++.+++|+|++.+++++ .|+.|++||+.. ++. +
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFG 282 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEEC
T ss_pred eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEe
Confidence 8888888654 699999999999999998775543 345689999999999877776 999999999977 421 0
Q ss_pred ------------------------------------EEE-eccccceeeeeeE-ecCCC---ceEEeecCCCeEEEEECc
Q 023772 220 ------------------------------------QEY-KGHICKSFKTDCC-LTNSD---AHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 220 ------------------------------------~~~-~~~~~~~~~~~~~-~~~~~---~~l~sgs~d~~i~iwd~~ 258 (277)
..+ .+|... +..++ +++++ .+|++|+.||.|++||+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 283 GRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNS--VSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp CCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSC--EEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred eccCccccchhhhcchhhhhhhcccccccccCccccccccccccCC--cceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 112 255433 34444 44666 899999999999999998
Q ss_pred Cccc
Q 023772 259 DASV 262 (277)
Q Consensus 259 ~~~~ 262 (277)
+++.
T Consensus 361 ~~~~ 364 (372)
T 1k8k_C 361 SLES 364 (372)
T ss_dssp HHHH
T ss_pred ChhH
Confidence 8654
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-36 Score=257.06 Aligned_cols=249 Identities=18% Similarity=0.230 Sum_probs=204.2
Q ss_pred cceeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCC-------eeEEEEeccCccEEEEEEcCCC-CEEEEEeCC
Q 023772 11 ANVLKGHEGAVLAARFNG-DGNYCLSCGKDRTIRLWNPHRG-------IHIKTYKSHGREVRDVHVTADN-SKLISCGGD 81 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~-~~~~l~s~s~d~~v~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~d 81 (277)
...+.+|.++|.+++|+| ++++|++|+.|++|++||+.++ +.+..+.+|...|.+++|+|++ .+|++++.|
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 445789999999999999 9999999999999999999887 5678899999999999999998 699999999
Q ss_pred CcEEEEECCCCceeEEe--ecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEee-ccccCc-EEEEEecC-
Q 023772 82 RQIFYWDVSTGRVIRKF--RGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQII-DSFQDS-VMSVCLTK- 156 (277)
Q Consensus 82 ~~v~~wd~~~~~~~~~~--~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~-~~~~~~~~- 156 (277)
++|++||+++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||++... ....+ ..+... +..+.+.+
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE--EEEEEECSSCSSSCCEEEECST
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc--eeeeeccCCCCCcceEEEEcCC
Confidence 99999999999999999 8899999999999999999999999999999998643 23333 344433 55555554
Q ss_pred -CeEEEe---ecCCcEEEEEccCCccc----ccCCCCCeeEEEEeCCCCEEEE-EecCCeEEEEECCCCce-EEEEeccc
Q 023772 157 -TEIIGG---SVDGTVRTFDIRVGREL----SDDLGQPVNCISMSNDGNCILA-SCLDSTLRLLDRSTGEL-LQEYKGHI 226 (277)
Q Consensus 157 -~~~~~g---~~d~~i~i~d~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~-~~~d~~i~~wd~~~~~~-~~~~~~~~ 226 (277)
..+++| +.|+.|++||++..+.. .......+.+++|+|++++|++ |+.|+.|++||+.+++. +..+..+.
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~ 311 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS 311 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc
Confidence 447777 68999999999876541 1234567999999999999865 55799999999998874 55555544
Q ss_pred cceeeeeeEecCCCceEEeecCCCeEEEEECcCccce
Q 023772 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~ 263 (277)
.......++++|++.++++ .|+.+++|++.++.+.
T Consensus 312 ~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 312 SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred cCCcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence 3345567789999988775 4669999999987553
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.7e-36 Score=264.39 Aligned_cols=262 Identities=17% Similarity=0.248 Sum_probs=225.1
Q ss_pred cccceeeccCCc-EEEEEEeC--CCCEEEEEeCCCcEEEEcCCCC--------eeEEEEeccCccEEEEEEcCCCCEEEE
Q 023772 9 TEANVLKGHEGA-VLAARFNG--DGNYCLSCGKDRTIRLWNPHRG--------IHIKTYKSHGREVRDVHVTADNSKLIS 77 (277)
Q Consensus 9 ~~~~~l~~H~~~-V~~~~~~~--~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~l~t 77 (277)
.....+.+|.++ |.+++|+| ++++|++++.|++|++||+.++ +....+..|..+|.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 356678899999 99999999 9999999999999999999754 677888899999999999999999999
Q ss_pred EeCC----CcEEEEECCCCceeEEeecccCceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcceEeeccccC---cE
Q 023772 78 CGGD----RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD---SV 149 (277)
Q Consensus 78 ~s~d----~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~ 149 (277)
++.+ +.|.+|| .++.+..+.+|...|.++.|+|+++ ++++++.|+.|++||+... .....+..+.. .+
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~--~~~~~~~~~~~~~~~v 209 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF--KFSASDRTHHKQGSFV 209 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB--EEEEEECSSSCTTCCE
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc--ceeeeecccCCCCceE
Confidence 9988 6888887 6678889999999999999999998 8999999999999998754 34455666777 78
Q ss_pred EEEEecCC---eEEEeecCCcEEEEEccCCccccc------CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEE
Q 023772 150 MSVCLTKT---EIIGGSVDGTVRTFDIRVGRELSD------DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220 (277)
Q Consensus 150 ~~~~~~~~---~~~~g~~d~~i~i~d~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~ 220 (277)
.++.++++ .+++++.|+.|++||+++++.+.. .+..+|.+++|+ ++++|++++.|+.|++||+++++.+.
T Consensus 210 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp EEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 88888765 599999999999999988765432 456789999999 99999999999999999999999998
Q ss_pred EEeccc--cceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 221 EYKGHI--CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 221 ~~~~~~--~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
.+..+. .......+.+ +++.++++|+.||.|++||+.+++.+..+++|...|..+
T Consensus 289 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~ 345 (615)
T 1pgu_A 289 KWTLDKQQLGNQQVGVVA-TGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITAL 345 (615)
T ss_dssp EEECCTTCGGGCEEEEEE-EETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEcCCCCcccCceeEEEe-CCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEE
Confidence 887652 1122344444 378899999999999999999999999999999888765
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-37 Score=265.50 Aligned_cols=241 Identities=12% Similarity=0.076 Sum_probs=187.9
Q ss_pred eeeccCCcEEEEEEeCC------CCEEEEEeCCCcEEEEcCCCCee-----------EEEEeccCccEEEEEEcCCCCEE
Q 023772 13 VLKGHEGAVLAARFNGD------GNYCLSCGKDRTIRLWNPHRGIH-----------IKTYKSHGREVRDVHVTADNSKL 75 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~------~~~l~s~s~d~~v~iwd~~~~~~-----------~~~~~~h~~~v~~~~~~~~~~~l 75 (277)
.+.+|.+.|.+++|+|+ +.+|++++.|++|++||+.++.. ..++.+|...|++++|+++ ..|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~l 280 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTV 280 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeE
Confidence 46778999999999996 57999999999999999876532 3478889999999999986 589
Q ss_pred EEEeCCCcEEEEECCCCc-eeEEeecccCceeEE--EEecCC-CEEEEEeCCCcEEEEeCccCCCcceEeecccc--CcE
Q 023772 76 ISCGGDRQIFYWDVSTGR-VIRKFRGHESEVNAV--KFNEYS-SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQ--DSV 149 (277)
Q Consensus 76 ~t~s~d~~v~~wd~~~~~-~~~~~~~h~~~v~~i--~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~ 149 (277)
++|+.||+|++||+++++ +...+.+|..+|.++ .+++++ .+|+||+.|++|++||++....... +..+. ..+
T Consensus 281 asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~--~~~~~~~~~v 358 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT--TVSRFRGSNL 358 (524)
T ss_dssp EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE--EEEECSCCSC
T ss_pred EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc--cccccccCcc
Confidence 999999999999999764 456788999999999 567887 8999999999999999986433222 22222 234
Q ss_pred EEEEecC--CeEEEeecCCcEEEEEccCCcccc--cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCc--------
Q 023772 150 MSVCLTK--TEIIGGSVDGTVRTFDIRVGRELS--DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGE-------- 217 (277)
Q Consensus 150 ~~~~~~~--~~~~~g~~d~~i~i~d~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~-------- 217 (277)
.++.++| ..+++++.|++|++||++.+..+. ..+...|++++|+|+|++|++|+.|++|++||+..+.
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~ 438 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSS 438 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC----
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCc
Confidence 4555554 468999999999999999876533 2466789999999999999999999999999863210
Q ss_pred ------eE------------------------------EEEeccccceeeeeeEecCCC---ceEEeecCCCeEEEEECc
Q 023772 218 ------LL------------------------------QEYKGHICKSFKTDCCLTNSD---AHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 218 ------~~------------------------------~~~~~~~~~~~~~~~~~~~~~---~~l~sgs~d~~i~iwd~~ 258 (277)
.+ ..+.+|. ..+..++|+|++ .++|+|+.||.||||++.
T Consensus 439 ~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~--~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 439 ATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHG--INITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp --CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CC--CSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred cceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCC--ceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 01 1111222 223456788985 489999999999999986
No 82
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-37 Score=269.13 Aligned_cols=240 Identities=14% Similarity=0.093 Sum_probs=191.8
Q ss_pred cCCcEEEEEEeCCC---------CEEEE-------------------EeCCCcEEEEcCCCCee----EEEEeccCccEE
Q 023772 17 HEGAVLAARFNGDG---------NYCLS-------------------CGKDRTIRLWNPHRGIH----IKTYKSHGREVR 64 (277)
Q Consensus 17 H~~~V~~~~~~~~~---------~~l~s-------------------~s~d~~v~iwd~~~~~~----~~~~~~h~~~v~ 64 (277)
+.++|.+++|+|++ ++||+ ++.|++|+|||+.+++. ..++..|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 67788888888775 45554 66889999999877653 245677889999
Q ss_pred EEEEcCC------CCEEEEEeCCCcEEEEECCCCce-----------eEEeecccCceeEEEEecCCCEEEEEeCCCcEE
Q 023772 65 DVHVTAD------NSKLISCGGDRQIFYWDVSTGRV-----------IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLR 127 (277)
Q Consensus 65 ~~~~~~~------~~~l~t~s~d~~v~~wd~~~~~~-----------~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~ 127 (277)
+++|+|+ +.+|++++.|++|++||+.+++. ..++.+|...|.+++|+++ ..|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999996 57999999999999999986632 3467889999999999986 4899999999999
Q ss_pred EEeCccCCCcceEeeccccCcEEEE--EecC---CeEEEeecCCcEEEEEccCCcccccC--C--CCCeeEEEEeCCCCE
Q 023772 128 AWDCRSHSTEPIQIIDSFQDSVMSV--CLTK---TEIIGGSVDGTVRTFDIRVGRELSDD--L--GQPVNCISMSNDGNC 198 (277)
Q Consensus 128 iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~g~~d~~i~i~d~~~~~~~~~~--~--~~~v~~~~~s~~~~~ 198 (277)
+||++... .+...+..|...|.++ .+.+ ..+++|+.|++|++||+++++..... + ...+.+++|+|+++.
T Consensus 291 lWD~~~~~-~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~ 369 (524)
T 2j04_B 291 EFDLTDPE-VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS 369 (524)
T ss_dssp EEETTBCS-SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE
T ss_pred EEECCCCC-CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe
Confidence 99998643 2344566788889888 4444 45899999999999999887643321 1 135789999999999
Q ss_pred EEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCc
Q 023772 199 ILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 199 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~ 260 (277)
+++++.|++|++||++++.++..+.+|... +..++++|++.+|++|+.||+|++||+...
T Consensus 370 l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~--V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 370 YIYSDGASSLRAVPSRAAFAVHPLVSRETT--ITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EEEECSSSEEEEEETTCTTCCEEEEECSSC--EEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred EEEeCCCCcEEEEECcccccceeeecCCCc--eEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 999999999999999999888888888654 456778999999999999999999998754
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-35 Score=239.96 Aligned_cols=246 Identities=18% Similarity=0.255 Sum_probs=205.8
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCC---CeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEE
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR---GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYW 87 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~w 87 (277)
...+..|.++|.+++|+|+++++++++.|+.+++|++.. ++....+..|...|.++.| +++++++++.|+.|++|
T Consensus 52 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~ 129 (313)
T 3odt_A 52 GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVW 129 (313)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEE
Confidence 456778999999999999999999999999999999764 3567788999999999999 57799999999999999
Q ss_pred ECCCCceeEEeecccCceeEEEEec-CCCEEEEEeCCCcEEEEeCccCCCcceEeecc-ccCcEEEEEecCC-eEEEeec
Q 023772 88 DVSTGRVIRKFRGHESEVNAVKFNE-YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDS-FQDSVMSVCLTKT-EIIGGSV 164 (277)
Q Consensus 88 d~~~~~~~~~~~~h~~~v~~i~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~g~~ 164 (277)
| .++.+..+..|..++.++.+.+ +++.+++++.|+.|++||... ....+.. +...+..+.+.+. .+++++.
T Consensus 130 d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 203 (313)
T 3odt_A 130 K--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK----VIKTFSGIHNDVVRHLAVVDDGHFISCSN 203 (313)
T ss_dssp E--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE----EEEEECSSCSSCEEEEEEEETTEEEEEET
T ss_pred c--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc----eEEEEeccCcccEEEEEEcCCCeEEEccC
Confidence 9 6778888999999999999988 899999999999999999432 2333443 6677777777643 3999999
Q ss_pred CCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCce
Q 023772 165 DGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH 242 (277)
Q Consensus 165 d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (277)
|+.|++||+++++.+.. .+..++++++|+|++ .|++++.|+.|++||+++++++..+..|.. ....++++|++.
T Consensus 204 dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--~i~~~~~~~~~~- 279 (313)
T 3odt_A 204 DGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI--SIWSVDCMSNGD- 279 (313)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSS--CEEEEEECTTSC-
T ss_pred CCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCc--eEEEEEEccCCC-
Confidence 99999999998776543 356789999999999 589999999999999999999999988754 345667899888
Q ss_pred EEeecCCCeEEEEECcCccceeeecc
Q 023772 243 VTGGSEDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 243 l~sgs~d~~i~iwd~~~~~~~~~~~~ 268 (277)
+++++.||.|++||+++++.+.....
T Consensus 280 ~~~~~~dg~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 280 IIVGSSDNLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp EEEEETTSCEEEEESCGGGCCC----
T ss_pred EEEEeCCCcEEEEeCCCCceeehhhh
Confidence 55688999999999999988766553
No 84
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1e-36 Score=259.89 Aligned_cols=249 Identities=14% Similarity=0.161 Sum_probs=189.2
Q ss_pred eeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCeeEEEEecc--CccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 13 VLKGHEGAVLAARFNG-DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH--GREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
.+.+|.++|++++|+| ++++|+|||.|++|++||+.++........| ...+.+++|++++++|++|+.|+.|++||+
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~ 238 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNM 238 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEES
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeecc
Confidence 3568999999999998 7899999999999999999876544333333 345789999999999999999999999998
Q ss_pred CCCceeEEeecccCceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcc-eEeeccccCcEEEEEecC--CeEEEeecC
Q 023772 90 STGRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEP-IQIIDSFQDSVMSVCLTK--TEIIGGSVD 165 (277)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~g~~d 165 (277)
+. +.+.++.+|..+|.+++|+|++. ++++++.|++|++||++...... ......|...+.++.+++ ..+++++.|
T Consensus 239 ~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D 317 (435)
T 4e54_B 239 DG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQK 317 (435)
T ss_dssp SS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS
T ss_pred Cc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCC
Confidence 64 56678899999999999999876 78899999999999998654332 223345778888888865 469999999
Q ss_pred CcEEEEEccCCcccccC--C----C--CCeeEEEEeCCCCEEEEEe------------cCCeEEEEECCCCceEEEEecc
Q 023772 166 GTVRTFDIRVGRELSDD--L----G--QPVNCISMSNDGNCILASC------------LDSTLRLLDRSTGELLQEYKGH 225 (277)
Q Consensus 166 ~~i~i~d~~~~~~~~~~--~----~--~~v~~~~~s~~~~~l~~~~------------~d~~i~~wd~~~~~~~~~~~~~ 225 (277)
+.|++||++.+...... + . ..+....|+|++.++++++ .++.|++||..+++++..+..+
T Consensus 318 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~ 397 (435)
T 4e54_B 318 SEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP 397 (435)
T ss_dssp SCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS
T ss_pred CEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC
Confidence 99999999876543211 1 1 1223346677776666654 3467999999999998877543
Q ss_pred ccceeeeeeEecCCCceEEeecCCCeEEEEECcCccce
Q 023772 226 ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~ 263 (277)
....+...+.|+|++.+|++|+ |+.|+|||+++++..
T Consensus 398 ~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 398 ESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp SCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred CCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 2222223346899999999987 889999999998764
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-35 Score=251.02 Aligned_cols=253 Identities=16% Similarity=0.251 Sum_probs=209.7
Q ss_pred ccCCcEE--EEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEec-cCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 023772 16 GHEGAVL--AARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKS-HGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG 92 (277)
Q Consensus 16 ~H~~~V~--~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~ 92 (277)
+|...+. ++.|+ +..+++++.|+.|++||..+++....+.. |...|.+++|+|++++|++|+.||.|++||++++
T Consensus 89 ~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 89 GIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 6766644 45555 46788999999999999999988887776 7889999999999999999999999999999999
Q ss_pred ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecCCcEEE
Q 023772 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRT 170 (277)
Q Consensus 93 ~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i~i 170 (277)
+.+..+.+|...|.++.|+ ++.+++++.||.|++||++... .....+..+...+..+.+++ ..+++|+.|+.|++
T Consensus 167 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 167 TKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIAN-HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp CEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCc-ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 9999999999999999995 5799999999999999998533 34555667888888888865 45999999999999
Q ss_pred EEccCCccccc--CCCCCeeEEEEeCCCC-EEEEEe--cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEe
Q 023772 171 FDIRVGRELSD--DLGQPVNCISMSNDGN-CILASC--LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245 (277)
Q Consensus 171 ~d~~~~~~~~~--~~~~~v~~~~~s~~~~-~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 245 (277)
||++.++.... .+...|.+++|+|++. .+++++ .|+.|++||+.+++++..+..+ .....++++|++.++++
T Consensus 244 wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG---SQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp EETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS---SCEEEEEECSSSSEEEE
T ss_pred ccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC---CcEEEEEECCCCCeEEE
Confidence 99998765433 4567899999999775 455544 6999999999999998888643 23566788999999988
Q ss_pred --ecCCCeEEEEECcCcccee--eeccCcceeEee
Q 023772 246 --GSEDGYIYFWDLVDASVVA--KFKAHSLVVKLL 276 (277)
Q Consensus 246 --gs~d~~i~iwd~~~~~~~~--~~~~h~~~v~~~ 276 (277)
|+.||.|++||+.+++... .+.+|...|..+
T Consensus 321 ~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~ 355 (401)
T 4aez_A 321 THGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYS 355 (401)
T ss_dssp EECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEE
T ss_pred EeecCCCcEEEEecCCccceeEEEecCCCCCEEEE
Confidence 6699999999999966554 466888777543
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.2e-36 Score=254.61 Aligned_cols=243 Identities=24% Similarity=0.479 Sum_probs=201.8
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
...+.+|.++|.+++| ++++|++|+.||+|++||+.+++.+..+..|...|.+++|+ ++.+++|+.|+.|++||+.
T Consensus 166 ~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~ 241 (435)
T 1p22_A 166 KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMA 241 (435)
T ss_dssp EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECS
T ss_pred EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCC
Confidence 4567899999999998 78899999999999999999999999999999999999997 4599999999999999999
Q ss_pred CCcee---EEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecCCc
Q 023772 91 TGRVI---RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGT 167 (277)
Q Consensus 91 ~~~~~---~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 167 (277)
+++.. ..+.+|...|.++.+ +++++++|+.||.|++||+++. .....+..+...+.++.+++..+++|+.||.
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~ 317 (435)
T 1p22_A 242 SPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC--EFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 317 (435)
T ss_dssp SSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEEETTEEEEEETTSC
T ss_pred CCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC--cEEEEEcCCCCcEEEEEeCCCEEEEEeCCCe
Confidence 87755 677899999999999 6789999999999999999865 3455667788889999999999999999999
Q ss_pred EEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCc---------eEEEEeccccceeeeeeEe
Q 023772 168 VRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGE---------LLQEYKGHICKSFKTDCCL 236 (277)
Q Consensus 168 i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~---------~~~~~~~~~~~~~~~~~~~ 236 (277)
|++||+++++.+.. .+...+.+++| ++.+|++|+.||.|++||+.+++ ++..+.+|.... ..+.+
T Consensus 318 i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v--~~l~~ 393 (435)
T 1p22_A 318 IRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV--FRLQF 393 (435)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC--CCEEE
T ss_pred EEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCe--EEEEe
Confidence 99999998876543 35568999888 68899999999999999997665 788888886543 33344
Q ss_pred cCCCceEEeecCCCeEEEEECcCccceeeec
Q 023772 237 TNSDAHVTGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 237 ~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
++.++++|+.||.|++||+.+........
T Consensus 394 --~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 422 (435)
T 1p22_A 394 --DEFQIVSSSHDDTILIWDFLNDPAAQAEP 422 (435)
T ss_dssp --CSSCEEECCSSSEEEEEC-----------
T ss_pred --CCCEEEEEeCCCEEEEEECCCCCCcccCC
Confidence 78899999999999999999876655443
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5e-35 Score=248.38 Aligned_cols=248 Identities=15% Similarity=0.253 Sum_probs=204.9
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEe--ccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 023772 21 VLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK--SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF 98 (277)
Q Consensus 21 V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~ 98 (277)
.+.|+|+++ ++|+.| .|++|+|||..+++....+. +|...|++++|+|++++|++|+.|++|++||++++++++.+
T Consensus 108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 185 (420)
T ss_dssp CBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Confidence 456899975 466665 59999999999998877665 56778999999999999999999999999999999999999
Q ss_pred ecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecCCcEEEEEccCC
Q 023772 99 RGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVG 176 (277)
Q Consensus 99 ~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~~i~i~d~~~~ 176 (277)
.+|...+.++.++ +..+++|+.|+.+++||.+... ..+..+..+...+..+.+.+ ..+++++.|+.+++||...+
T Consensus 186 ~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~-~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 186 TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc-eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 9999999988775 5799999999999999987643 34455667777777777654 56999999999999999876
Q ss_pred ccc------ccCCCCCeeEEEEeCCCC-EEEE--EecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEe--
Q 023772 177 REL------SDDLGQPVNCISMSNDGN-CILA--SCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG-- 245 (277)
Q Consensus 177 ~~~------~~~~~~~v~~~~~s~~~~-~l~~--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-- 245 (277)
+.. ...+...|.+++|+|.+. .+++ |+.|++|++||+.+++++..+..+. ....+.+++++..+++
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~---~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVCSILWSPHYKELISGH 339 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS---CEEEEEEETTTTEEEEEE
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc---ceeeeeecCCCCeEEEEE
Confidence 532 123456899999999764 4444 4579999999999999998887663 3455677888887765
Q ss_pred ecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 246 GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 246 gs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
|+.|+.|++||+.+++++.++++|...|..+
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l 370 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSL 370 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 4589999999999999999999999988765
No 88
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6e-36 Score=254.80 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=208.4
Q ss_pred ceeeccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEcCCC----------CeeEEEEeccCccEEEEEEcCCCC-EEEEEe
Q 023772 12 NVLKGHEGAVLAARFNGD-GNYCLSCGKDRTIRLWNPHR----------GIHIKTYKSHGREVRDVHVTADNS-KLISCG 79 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~-~~~l~s~s~d~~v~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s 79 (277)
..+.+|.++|++++|+|+ +.+|++++.||.|++||+.+ ......+.+|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445789999999999997 78999999999999999876 567888999999999999999988 999999
Q ss_pred CCCcEEEEECCCCce-------eEEeecccCceeEEEEec-CCCEEEEEeCCCcEEEEeCccCC-CcceEeeccccCcEE
Q 023772 80 GDRQIFYWDVSTGRV-------IRKFRGHESEVNAVKFNE-YSSVVVSAGYDQSLRAWDCRSHS-TEPIQIIDSFQDSVM 150 (277)
Q Consensus 80 ~d~~v~~wd~~~~~~-------~~~~~~h~~~v~~i~~~~-~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~ 150 (277)
.||+|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.|+.|++||++... ......+..+...+.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987322 456778999999999999 67899999999999999998653 234445567788888
Q ss_pred EEEecCC---eEEEeecCCcEEEEEccCCcc-cc--cCCCCCeeEEEEeCCCC-EEEEEecCCeEEEEECCC--------
Q 023772 151 SVCLTKT---EIIGGSVDGTVRTFDIRVGRE-LS--DDLGQPVNCISMSNDGN-CILASCLDSTLRLLDRST-------- 215 (277)
Q Consensus 151 ~~~~~~~---~~~~g~~d~~i~i~d~~~~~~-~~--~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~~wd~~~-------- 215 (277)
++.+++. .+++|+.||.|++||++.... +. ..+...|.+++|+|++. +|++++.|+.|++||+..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 8888764 388999999999999987432 22 23567899999999985 689999999999999976
Q ss_pred ------CceEEEEeccccceeeeeeEecCCCc-eEEeecCCCeEEEEECcCccc
Q 023772 216 ------GELLQEYKGHICKSFKTDCCLTNSDA-HVTGGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 216 ------~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~d~~i~iwd~~~~~~ 262 (277)
.+++..+.+|.. .+..++++|++. ++++++.||.|++|++.+..+
T Consensus 362 ~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTA--KISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp HHHHCCTTEEEECCCCSS--CEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred ccccCCcceEEEcCCCCC--CceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence 256666667743 356678899998 899999999999999987644
No 89
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.5e-35 Score=262.12 Aligned_cols=247 Identities=13% Similarity=0.185 Sum_probs=218.2
Q ss_pred eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC----eeEEEEeccCcc-EEEEEEcC--CCCEEEEEeCCCcEEEE
Q 023772 15 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG----IHIKTYKSHGRE-VRDVHVTA--DNSKLISCGGDRQIFYW 87 (277)
Q Consensus 15 ~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~h~~~-v~~~~~~~--~~~~l~t~s~d~~v~~w 87 (277)
..|.+.|.+++|+|+|++|++++ |+.+++||+.++ +....+.+|... |++++|+| ++++|++++.|+.|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 57999999999999999999988 789999999998 889999999999 99999999 99999999999999999
Q ss_pred ECCCC--------ceeEEeecccCceeEEEEecCCCEEEEEeCC----CcEEEEeCccCCCcceEeeccccCcEEEEEec
Q 023772 88 DVSTG--------RVIRKFRGHESEVNAVKFNEYSSVVVSAGYD----QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT 155 (277)
Q Consensus 88 d~~~~--------~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
|+.++ +.+..+..|..+|.+++|+|+++++++++.| +.|++||.. .....+..+...+..+.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~----~~~~~~~~~~~~v~~~~~~ 169 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG----NSLGEVSGHSQRINACHLK 169 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC----CEEEECCSCSSCEEEEEEC
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC----CcceeeecCCccEEEEEEC
Confidence 99754 6777888999999999999999999999988 799999832 3455667788889999888
Q ss_pred CC---eEEEeecCCcEEEEEccCCccccc--CCCC---CeeEEEEeCC-CCEEEEEecCCeEEEEECCCCceEEEE-e--
Q 023772 156 KT---EIIGGSVDGTVRTFDIRVGRELSD--DLGQ---PVNCISMSND-GNCILASCLDSTLRLLDRSTGELLQEY-K-- 223 (277)
Q Consensus 156 ~~---~~~~g~~d~~i~i~d~~~~~~~~~--~~~~---~v~~~~~s~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~-~-- 223 (277)
+. .+++++.|+.|++||++.++.... .+.. .+.+++|+|+ +++|++++.|+.|++||+++++.+..+ .
T Consensus 170 ~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 249 (615)
T 1pgu_A 170 QSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQ 249 (615)
T ss_dssp SSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTT
T ss_pred CCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccc
Confidence 75 589999999999999988765433 3445 8999999999 999999999999999999999999888 4
Q ss_pred -ccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 224 -GHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 224 -~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
+|.. ....++++ ++.++++++.|+.|++||+.+++.+..+..|
T Consensus 250 ~~~~~--~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 250 EPVQG--GIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp BCCCS--CEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred cccCC--ceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 5643 34556677 8999999999999999999999999999877
No 90
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.6e-36 Score=253.01 Aligned_cols=242 Identities=12% Similarity=0.085 Sum_probs=185.0
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEE-----------eCCCcEEEEcCCCCee-EE---EE-----eccCccEEEEEEcCCC
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSC-----------GKDRTIRLWNPHRGIH-IK---TY-----KSHGREVRDVHVTADN 72 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~-----------s~d~~v~iwd~~~~~~-~~---~~-----~~h~~~v~~~~~~~~~ 72 (277)
.|.+|+..|.++++++ +.+++| +.|+++|+|+..+... +. .. ..+...+.+++|+|++
T Consensus 68 ~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 4678999998887764 455554 5678899998755422 11 11 1234568999999999
Q ss_pred CEEEEE--eCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEE
Q 023772 73 SKLISC--GGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVM 150 (277)
Q Consensus 73 ~~l~t~--s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 150 (277)
++++++ +.|++|++||+++++++..+. |..+|.+++|+|+++++++++.|+ +.+|+..............+...+.
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~ 223 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLS 223 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEE
Confidence 998654 478999999999999988886 778899999999999999998655 5566655443322233344566677
Q ss_pred EEEecC--CeEEEeecCC----cEEEEEccCCccc------ccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCce
Q 023772 151 SVCLTK--TEIIGGSVDG----TVRTFDIRVGREL------SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218 (277)
Q Consensus 151 ~~~~~~--~~~~~g~~d~----~i~i~d~~~~~~~------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~ 218 (277)
.+.+++ ..+++++.|+ .++.||+...... ...+..+|++++|+|+|++|++|+.|++|+|||++++++
T Consensus 224 ~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM 303 (365)
T ss_dssp EEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE
Confidence 766654 5588888887 5888998765421 123456899999999999999999999999999999999
Q ss_pred EEEE-eccccceeeeeeEecCCCceEEeecCCCeEEEEECcCc
Q 023772 219 LQEY-KGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 219 ~~~~-~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~ 260 (277)
+..+ .+|.. .+..++|+|++++|++||.|++|||||++..
T Consensus 304 ~~~~~~gH~~--~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 304 SKIFKQAHSF--AITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTSSSS--CEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEecCcccC--CEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9886 57854 4567789999999999999999999999753
No 91
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-35 Score=250.74 Aligned_cols=254 Identities=15% Similarity=0.119 Sum_probs=207.4
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe---eEEEEecc-----------------------------------
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI---HIKTYKSH----------------------------------- 59 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h----------------------------------- 59 (277)
..|+.+++|+++|++|+++ .++.|++||+.+|+ .+..+..+
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4688999999999976665 57899999999888 66655533
Q ss_pred -------------------CccEEEEEEcCCCCEE-EEEeCCCcEEEEECC--CCceeEEee--cccCceeEEEEecCCC
Q 023772 60 -------------------GREVRDVHVTADNSKL-ISCGGDRQIFYWDVS--TGRVIRKFR--GHESEVNAVKFNEYSS 115 (277)
Q Consensus 60 -------------------~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~--~~~~~~~~~--~h~~~v~~i~~~~~~~ 115 (277)
...|++++|+|++++| ++++.|+.|++||+. +++++..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 3369999999999996 899999999999999 888888876 5678999999999999
Q ss_pred EEEEEeCCCcEEEEeCccCCCc--ceEeeccccCcEEEEEecCC-----eEEEeecCCcEEEEEccCCccccc---CCCC
Q 023772 116 VVVSAGYDQSLRAWDCRSHSTE--PIQIIDSFQDSVMSVCLTKT-----EIIGGSVDGTVRTFDIRVGRELSD---DLGQ 185 (277)
Q Consensus 116 ~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~g~~d~~i~i~d~~~~~~~~~---~~~~ 185 (277)
+|++++.||.+++|++...... ....+..+...+.++.++++ .+++|+.|++|++||+++++.+.. .+..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 9999999999999998765432 22244567778888887765 699999999999999998765533 4567
Q ss_pred CeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccc-----------------------cceeeeeeEecCCCce
Q 023772 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI-----------------------CKSFKTDCCLTNSDAH 242 (277)
Q Consensus 186 ~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 242 (277)
.|.+++|+ ++++|++++.|+.|++||+++++++..+..+. .......++++|++.+
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 89999999 99999999999999999999999888876431 1122345678899999
Q ss_pred EEeec-CCCeEEEEEC--cCc---cceeeeccCcceeE
Q 023772 243 VTGGS-EDGYIYFWDL--VDA---SVVAKFKAHSLVVK 274 (277)
Q Consensus 243 l~sgs-~d~~i~iwd~--~~~---~~~~~~~~h~~~v~ 274 (277)
+++++ .|+.|++|++ .++ +.+..++.| ..|.
T Consensus 322 l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~ 358 (450)
T 2vdu_B 322 VAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVI 358 (450)
T ss_dssp EEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEE
T ss_pred EEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceE
Confidence 99888 8999999999 665 777888888 4443
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.2e-34 Score=233.71 Aligned_cols=265 Identities=14% Similarity=0.232 Sum_probs=209.9
Q ss_pred CCccccccceeec--cCC--cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEe--ccCccEEEEEEcCCCCEEEE
Q 023772 4 SDLPRTEANVLKG--HEG--AVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK--SHGREVRDVHVTADNSKLIS 77 (277)
Q Consensus 4 ~~~~~~~~~~l~~--H~~--~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~t 77 (277)
|.+|..+..+|.+ ... -.++|+||+++ +|++ +.|++|+|||+.++++++.+. +|...|++++|+|++++|++
T Consensus 7 r~~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 7 RYIPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp CCCCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred cccCCCCCEEeeCCCCcccccceEEEECCCC-EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE
Confidence 5667777667753 222 24679999886 6655 569999999999999888775 57778999999999999999
Q ss_pred EeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEec--
Q 023772 78 CGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT-- 155 (277)
Q Consensus 78 ~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-- 155 (277)
|+.|++|++||++++++++.+.+|...+.++.+ ++..+++++.++.+++|+..... .....+..+...+..+.+.
T Consensus 85 gs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 161 (318)
T 4ggc_A 85 GTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE-HHVATLSGHSQEVCGLRWAPD 161 (318)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS-CEEEEEECCSSCEEEEEECTT
T ss_pred EECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc-eeEEEEcCccCceEEEEEcCC
Confidence 999999999999999999999999998876555 46799999999999999987543 3445556677777776665
Q ss_pred CCeEEEeecCCcEEEEEccCCcccc------cCCCCCeeEEEEeCCCCEE---EEEecCCeEEEEECCCCceEEEEeccc
Q 023772 156 KTEIIGGSVDGTVRTFDIRVGRELS------DDLGQPVNCISMSNDGNCI---LASCLDSTLRLLDRSTGELLQEYKGHI 226 (277)
Q Consensus 156 ~~~~~~g~~d~~i~i~d~~~~~~~~------~~~~~~v~~~~~s~~~~~l---~~~~~d~~i~~wd~~~~~~~~~~~~~~ 226 (277)
+..+++++.|++|++||+++++... ......+.++.++|++..+ ++++.++.|++||............+.
T Consensus 162 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~ 241 (318)
T 4ggc_A 162 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS 241 (318)
T ss_dssp SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee
Confidence 4569999999999999998765322 2345679999999976543 456788999999999887776654432
Q ss_pred cceeeeeeEecCCCceEEe--ecCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 227 CKSFKTDCCLTNSDAHVTG--GSEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~s--gs~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
....+++++++..+++ |+.|+.|++||+.++++++++++|...|..+
T Consensus 242 ---~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l 290 (318)
T 4ggc_A 242 ---QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL 290 (318)
T ss_dssp ---CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred ---eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 2344567787776654 5689999999999999999999999988765
No 93
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-36 Score=252.73 Aligned_cols=204 Identities=13% Similarity=0.146 Sum_probs=163.1
Q ss_pred cccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe---eEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEE
Q 023772 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI---HIKTYKSHGREVRDVHVTADNSKLISCGGDRQIF 85 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~ 85 (277)
.....+.+|.++|.+++|+|++++|++++.|++|++||+.++. ....+..|...|.+++|+|++++|++++.|+.|+
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence 3456678999999999999999999999999999999998876 6777888999999999999999999999999999
Q ss_pred EEECCCCc---eeEEeec-ccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCC----------------CcceEeeccc
Q 023772 86 YWDVSTGR---VIRKFRG-HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS----------------TEPIQIIDSF 145 (277)
Q Consensus 86 ~wd~~~~~---~~~~~~~-h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~----------------~~~~~~~~~~ 145 (277)
+||+++++ +...+.. |...|.+++|+|+++++++++.|++|++||++... ......+ .+
T Consensus 126 iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 204 (377)
T 3dwl_C 126 VCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PS 204 (377)
T ss_dssp ECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CC
T ss_pred EEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cC
Confidence 99999877 4677877 99999999999999999999999999999985321 1122223 66
Q ss_pred cCcEEEEEecCC--eEEEeecCCcEEEEEccCCcc----ccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECC
Q 023772 146 QDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRE----LSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRS 214 (277)
Q Consensus 146 ~~~~~~~~~~~~--~~~~g~~d~~i~i~d~~~~~~----~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~ 214 (277)
...+..+.++++ .+++++.|+.|++||+++++. +.. .+..++.+++|+|++++|++++.|+.+ +|+..
T Consensus 205 ~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 205 GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 777888888764 599999999999999998765 332 355689999999999998888766655 77654
No 94
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.9e-35 Score=276.37 Aligned_cols=263 Identities=22% Similarity=0.369 Sum_probs=208.3
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcC--CCCEEEEEeCCCcEEEE
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTA--DNSKLISCGGDRQIFYW 87 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~t~s~d~~v~~w 87 (277)
....+.+|.++|.+++|+|+|++|++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++..+++|+.|+.|++|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 3456789999999999999999999999999999999999999999999999999999999 55689999999999999
Q ss_pred ECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcc-----------------------------
Q 023772 88 DVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEP----------------------------- 138 (277)
Q Consensus 88 d~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~----------------------------- 138 (277)
|+.+++++.++.+|..+|.+++|+|+++.+++++.||+|++||++......
T Consensus 729 d~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 808 (1249)
T 3sfz_A 729 DLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA 808 (1249)
T ss_dssp ETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT
T ss_pred ECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC
Confidence 999999999999999999999999999999999999999999986431100
Q ss_pred ------------------------------------------------------------------eEeeccccCcEEEE
Q 023772 139 ------------------------------------------------------------------IQIIDSFQDSVMSV 152 (277)
Q Consensus 139 ------------------------------------------------------------------~~~~~~~~~~~~~~ 152 (277)
...+..|...+..+
T Consensus 809 dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v 888 (1249)
T 3sfz_A 809 DGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGV 888 (1249)
T ss_dssp TSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEE
Confidence 00011233334445
Q ss_pred EecC--CeEEEeecCCcEEEEEccCCccc---------------------------------------ccCCCCCeeEEE
Q 023772 153 CLTK--TEIIGGSVDGTVRTFDIRVGREL---------------------------------------SDDLGQPVNCIS 191 (277)
Q Consensus 153 ~~~~--~~~~~g~~d~~i~i~d~~~~~~~---------------------------------------~~~~~~~v~~~~ 191 (277)
.+++ ..+++++.|+.+++||+...... .......+.+++
T Consensus 889 ~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 968 (1249)
T 3sfz_A 889 MFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCC 968 (1249)
T ss_dssp EECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEE
T ss_pred EECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEE
Confidence 5543 34677777777777775431100 001134577788
Q ss_pred EeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcc
Q 023772 192 MSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSL 271 (277)
Q Consensus 192 ~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~ 271 (277)
|+|+++++++|+.||.|++||+.+++....+.+|... +..++++|+++++++|+.||.|++||+.+++... +.+|..
T Consensus 969 ~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~--v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~ 1045 (1249)
T 3sfz_A 969 LSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA--VRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQE 1045 (1249)
T ss_dssp ECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSC--CCCEEECSSSSCEEEECSSSBEEEEETTTTEEEC-CBCCSS
T ss_pred EcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCc--eEEEEECCCCCEEEEEcCCCEEEEEECCCCceEE-EecCCC
Confidence 8888888888888888888888888888888777543 4556789999999999999999999999987764 457766
Q ss_pred eeEe
Q 023772 272 VVKL 275 (277)
Q Consensus 272 ~v~~ 275 (277)
.|..
T Consensus 1046 ~v~~ 1049 (1249)
T 3sfz_A 1046 TVKD 1049 (1249)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 6554
No 95
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.7e-34 Score=236.41 Aligned_cols=217 Identities=21% Similarity=0.349 Sum_probs=185.6
Q ss_pred eeEEEEeccCccEEEEEEcCCC-CEEEEEeCCCcEEEEECCC-----CceeEEeecccCceeEEEEecCCCEEEEEeCCC
Q 023772 51 IHIKTYKSHGREVRDVHVTADN-SKLISCGGDRQIFYWDVST-----GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ 124 (277)
Q Consensus 51 ~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~d~~v~~wd~~~-----~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~ 124 (277)
....++++|.++|++++|+|++ ++|+||+.|++|++||+.. +.++..+.+|...|.+++|+|+++++++|+.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 4556889999999999999965 7999999999999999864 345778999999999999999999999999999
Q ss_pred cEEEEeCccCCCcceEeeccccCcEEEEEecCC--eEEEeecCCcEEEEEccCCccc-ccCCCCCeeEEEEeCC------
Q 023772 125 SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGREL-SDDLGQPVNCISMSND------ 195 (277)
Q Consensus 125 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~d~~i~i~d~~~~~~~-~~~~~~~v~~~~~s~~------ 195 (277)
+|++||+.+. +....+..|...+.++.+++. .+++|+.|++|++||++..... ...+...+.++.|+|.
T Consensus 88 ~v~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 88 TLRLWDVATG--ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp EEEEEETTTT--EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------
T ss_pred EEEEEECCCC--CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCC
Confidence 9999999764 345567778888998888764 5999999999999999754321 1235568999999985
Q ss_pred CCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcc
Q 023772 196 GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSL 271 (277)
Q Consensus 196 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~ 271 (277)
+..+++++.|+.|++||+++++....+.+|... ...++++|++.+|++|+.||.|++||+.+++.+..+..|..
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~--v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 239 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN--INTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDE 239 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC--EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSC
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecCCCCc--EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCc
Confidence 458999999999999999999999899888644 45667899999999999999999999999999999987754
No 96
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-34 Score=235.18 Aligned_cols=205 Identities=18% Similarity=0.302 Sum_probs=172.7
Q ss_pred EEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC--CceeEEeecccCceeEEEEec--CCCEEEEEeCCCcEEEE
Q 023772 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST--GRVIRKFRGHESEVNAVKFNE--YSSVVVSAGYDQSLRAW 129 (277)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~--~~~~~~~~~h~~~v~~i~~~~--~~~~l~s~~~d~~i~iw 129 (277)
..+.+|...|++++|+|++++|++|+.|++|++||+++ .+++.++.+|..+|++++|++ ++++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45678999999999999999999999999999999975 467889999999999999975 38899999999999999
Q ss_pred eCccCCCcceEeeccccCcEEEEEecCC----eEEEeecCCcEEEEEccCCcc----cccCCCCCeeEEEEeCC------
Q 023772 130 DCRSHSTEPIQIIDSFQDSVMSVCLTKT----EIIGGSVDGTVRTFDIRVGRE----LSDDLGQPVNCISMSND------ 195 (277)
Q Consensus 130 d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~d~~i~i~d~~~~~~----~~~~~~~~v~~~~~s~~------ 195 (277)
|++.........+..|...+.++.+.+. .+++++.|++|++||++.... ....+...|++++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 9986544455556677888999988763 599999999999999986532 12345668999999997
Q ss_pred -------CCEEEEEecCCeEEEEECCCCc----eEEEEeccccceeeeeeEecCCC---ceEEeecCCCeEEEEECcCc
Q 023772 196 -------GNCILASCLDSTLRLLDRSTGE----LLQEYKGHICKSFKTDCCLTNSD---AHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 196 -------~~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~l~sgs~d~~i~iwd~~~~ 260 (277)
+++|++|+.|++|++||+++++ +...+.+|.. .+..++++|++ .++++|+.|++|++||+++.
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~--~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC--ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 5789999999999999998765 5667888854 34667789984 89999999999999999874
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-35 Score=249.05 Aligned_cols=238 Identities=12% Similarity=0.146 Sum_probs=190.3
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCC---CCeeEEEEec------------cCccEEEEE--EcCCCCEEEEE
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPH---RGIHIKTYKS------------HGREVRDVH--VTADNSKLISC 78 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~---~~~~~~~~~~------------h~~~v~~~~--~~~~~~~l~t~ 78 (277)
+|.++|.+++|+|++++|++|+.|++|++||+. +++....+.. +...+.++. +++++.+|+++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 699999999999999999999999999999984 5555544433 344555665 55788999999
Q ss_pred eCCCcEEEEECCCCceeEEeec--ccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeec-cccCcEEEEEec
Q 023772 79 GGDRQIFYWDVSTGRVIRKFRG--HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIID-SFQDSVMSVCLT 155 (277)
Q Consensus 79 s~d~~v~~wd~~~~~~~~~~~~--h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~ 155 (277)
+.|+.|++||+.+++++..+.. |...|.+++|+|+++++++|+.||+|++||++... ....+. .+...+..+.+.
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~ 266 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV--LIRSWSFGDHAPITHVEVC 266 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE--EEEEEBCTTCEEEEEEEEC
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc--EEEEEecCCCCceEEEEec
Confidence 9999999999999999999988 89999999999999999999999999999998643 333332 455677888554
Q ss_pred CC------eEEEeecCCcEEEEEccCCccccc----------------------------CCCCCeeEEEEeCCCCEEEE
Q 023772 156 KT------EIIGGSVDGTVRTFDIRVGRELSD----------------------------DLGQPVNCISMSNDGNCILA 201 (277)
Q Consensus 156 ~~------~~~~g~~d~~i~i~d~~~~~~~~~----------------------------~~~~~v~~~~~s~~~~~l~~ 201 (277)
+. .+++|+.|+.|++||+++++.+.. .+...|++++|+ ++++|++
T Consensus 267 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s 345 (437)
T 3gre_A 267 QFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLT 345 (437)
T ss_dssp TTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEE
T ss_pred cccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEe
Confidence 32 589999999999999987653211 023458999999 7789999
Q ss_pred EecCCeEEEEECCCCceEEEEeccc-----------------------------------cceeeeeeEecCC--CceEE
Q 023772 202 SCLDSTLRLLDRSTGELLQEYKGHI-----------------------------------CKSFKTDCCLTNS--DAHVT 244 (277)
Q Consensus 202 ~~~d~~i~~wd~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~--~~~l~ 244 (277)
|+.|+.|++||+.+++....+.+|. ....+..+++.++ +.+|+
T Consensus 346 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~ 425 (437)
T 3gre_A 346 DEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLV 425 (437)
T ss_dssp EGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEE
T ss_pred cCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEE
Confidence 9999999999999998877777631 1222344455555 78999
Q ss_pred eecCCCeEEEEE
Q 023772 245 GGSEDGYIYFWD 256 (277)
Q Consensus 245 sgs~d~~i~iwd 256 (277)
+|+.||.|++|+
T Consensus 426 s~~~dG~I~iw~ 437 (437)
T 3gre_A 426 ACDNSGLIGIFQ 437 (437)
T ss_dssp EEETTSCEEEEC
T ss_pred EEcCCceEEEeC
Confidence 999999999995
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.1e-34 Score=236.17 Aligned_cols=238 Identities=12% Similarity=0.185 Sum_probs=182.0
Q ss_pred cceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEE-EEEeCCCcEEEEEC
Q 023772 11 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDV 89 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~ 89 (277)
...+.+|.++|++++|+|||++|++|+.|+ +++||..+++....... ..+..+++.++++.+ ++++.|++|++||+
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEET
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEEC
Confidence 335688999999999999999999988775 79999988766554432 357888898888877 56788899999999
Q ss_pred CCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEE--eecCCc
Q 023772 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIG--GSVDGT 167 (277)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~d~~ 167 (277)
.+++++.++. |..+|.++.++++. ++.+ .|+.|++||+.... ..+..+.. ....+.+.+..++. |+.||.
T Consensus 89 ~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~-~~~~~~~~---~~~~~~~s~~~la~~sg~~~g~ 160 (355)
T 3vu4_A 89 VKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPW-KRITDDIR---FGGVCEFSNGLLVYSNEFNLGQ 160 (355)
T ss_dssp TTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTC-CBSSCCEE---EEEEEEEETTEEEEEESSCTTC
T ss_pred CCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCc-eeeEEecc---CCceEEEEccEEEEeCCCcCcE
Confidence 9999998887 67799999998763 3333 48899999997651 11222222 22233344466655 688999
Q ss_pred EEEEEccCCc------------------ccccCCCCCeeEEEEeCCCCEEEEEecCCe-EEEEECCCCceEEEEe-c-cc
Q 023772 168 VRTFDIRVGR------------------ELSDDLGQPVNCISMSNDGNCILASCLDST-LRLLDRSTGELLQEYK-G-HI 226 (277)
Q Consensus 168 i~i~d~~~~~------------------~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-i~~wd~~~~~~~~~~~-~-~~ 226 (277)
|++||++.+. .....+..+|++++|+|+|++|++|+.|++ |++||+++++++..+. + |.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 9999998754 122345678999999999999999999998 9999999999999998 5 64
Q ss_pred cceeeeeeEecCCCceEEeecCCCeEEEEECcCcc
Q 023772 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDAS 261 (277)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~ 261 (277)
. ....++++|++.+|++|+.|+.|++||++++.
T Consensus 241 ~--~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 241 A--DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp S--CEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred C--cEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 3 45667899999999999999999999998764
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-34 Score=244.84 Aligned_cols=251 Identities=16% Similarity=0.197 Sum_probs=200.1
Q ss_pred cEEEEEEeCCCCEE-EEEeCCCcEEEEcCCCCe----eEEEEeccCccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCC-
Q 023772 20 AVLAARFNGDGNYC-LSCGKDRTIRLWNPHRGI----HIKTYKSHGREVRDVHVTA-DNSKLISCGGDRQIFYWDVSTG- 92 (277)
Q Consensus 20 ~V~~~~~~~~~~~l-~s~s~d~~v~iwd~~~~~----~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~d~~v~~wd~~~~- 92 (277)
....++++|+...+ ++++.||.|+||++.+.. ....+.+|..+|++++|+| ++++|++|+.|++|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 34568888876544 468999999999986542 3456788999999999999 8999999999999999999987
Q ss_pred ------ceeEEeecccCceeEEEEecCC-CEEEEEeCCCcEEEEeCccCCCcceEee--ccccCcEEEEEecC--CeEEE
Q 023772 93 ------RVIRKFRGHESEVNAVKFNEYS-SVVVSAGYDQSLRAWDCRSHSTEPIQII--DSFQDSVMSVCLTK--TEIIG 161 (277)
Q Consensus 93 ------~~~~~~~~h~~~v~~i~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~ 161 (277)
+++..+.+|...|.+++|+|++ +++++++.|++|++||++... ....+ ..+...+.++.+++ ..+++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSRDGALICT 193 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE--EEEEECTTTCCSCEEEEEECTTSSCEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC--ccEEEecCCCCCceEEEEECCCCCEEEE
Confidence 6688899999999999999998 699999999999999998643 34445 56788888888865 45999
Q ss_pred eecCCcEEEEEccCCccccc---CCC-CCeeEEEEeCCCCEEEEE---ecCCeEEEEECCCCce-EEEEe-ccccceeee
Q 023772 162 GSVDGTVRTFDIRVGRELSD---DLG-QPVNCISMSNDGNCILAS---CLDSTLRLLDRSTGEL-LQEYK-GHICKSFKT 232 (277)
Q Consensus 162 g~~d~~i~i~d~~~~~~~~~---~~~-~~v~~~~~s~~~~~l~~~---~~d~~i~~wd~~~~~~-~~~~~-~~~~~~~~~ 232 (277)
++.|+.|++||+++++.+.. .+. ..+.++.|+|++.+|++| +.|+.|++||+++++. +.... .+. ....
T Consensus 194 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~v~ 271 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS--SGVL 271 (402)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC--SSCE
T ss_pred EecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCC--Ccee
Confidence 99999999999998765433 232 348999999999999998 7999999999988654 33332 222 2345
Q ss_pred eeEecCCCceEE-eecCCCeEEEEECcCccc-eeeeccC--cceeE
Q 023772 233 DCCLTNSDAHVT-GGSEDGYIYFWDLVDASV-VAKFKAH--SLVVK 274 (277)
Q Consensus 233 ~~~~~~~~~~l~-sgs~d~~i~iwd~~~~~~-~~~~~~h--~~~v~ 274 (277)
.++++|++.+++ +|+.||.|++||+.+++. +..+..| ...|.
T Consensus 272 ~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~ 317 (402)
T 2aq5_A 272 LPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQR 317 (402)
T ss_dssp EEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCS
T ss_pred EEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCccc
Confidence 668899999886 677899999999999884 5555544 34443
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.2e-34 Score=235.46 Aligned_cols=237 Identities=11% Similarity=0.024 Sum_probs=197.8
Q ss_pred cceeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEcC-CCCeeEEEEec--cCccEEEEEEcCCCCEEEEEeCCCcEEE
Q 023772 11 ANVLKGHEGAVLAARFNGDGN-YCLSCGKDRTIRLWNP-HRGIHIKTYKS--HGREVRDVHVTADNSKLISCGGDRQIFY 86 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~-~l~s~s~d~~v~iwd~-~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~t~s~d~~v~~ 86 (277)
...+.+|.++|.+++|+|+++ +|++|+.|+.|++||+ .+++. ..+.. |...|.+++|+| +++|++++.|+.|++
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~i 126 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEV 126 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEE
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEE
Confidence 455679999999999999999 9999999999999999 77654 77888 999999999999 999999999999999
Q ss_pred EECCC---------CceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCcc-CCCcceEeeccccCcEEEEEecC
Q 023772 87 WDVST---------GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCLTK 156 (277)
Q Consensus 87 wd~~~---------~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~ 156 (277)
||+.+ ++++..+. |...|.++++++++ +++++.|+.|++||++. ...........+...+..+.+.+
T Consensus 127 wd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~ 203 (342)
T 1yfq_A 127 IDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLP 203 (342)
T ss_dssp ECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECS
T ss_pred EcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECC
Confidence 99987 77777776 89999999999886 99999999999999987 44333334445666788877765
Q ss_pred ---CeEEEeecCCcEEEEEccCC------ccccc--CC---------CCCeeEEEEeCCCCEEEEEecCCeEEEEECCCC
Q 023772 157 ---TEIIGGSVDGTVRTFDIRVG------RELSD--DL---------GQPVNCISMSNDGNCILASCLDSTLRLLDRSTG 216 (277)
Q Consensus 157 ---~~~~~g~~d~~i~i~d~~~~------~~~~~--~~---------~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~ 216 (277)
..+++++.||.+++||++.. +.... .+ ..+|.+++|+|++++|++++.||.|++||+.++
T Consensus 204 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 204 KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred CCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 56999999999999999765 22211 22 238999999999999999999999999999999
Q ss_pred ceEEEEecc-ccceeeeeeEecCCCceEEeecCCCe-EEEEE
Q 023772 217 ELLQEYKGH-ICKSFKTDCCLTNSDAHVTGGSEDGY-IYFWD 256 (277)
Q Consensus 217 ~~~~~~~~~-~~~~~~~~~~~~~~~~~l~sgs~d~~-i~iwd 256 (277)
+++..+.+| .... ..++ +++.+|++|+.||. .+.|.
T Consensus 284 ~~~~~~~~~h~~~v--~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 284 KKIKNFAKFNEDSV--VKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEEEECCCCSSSEE--EEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred hHhhhhhcccCCCc--eEec--CCCCeEEEEecCCccccccc
Confidence 999998887 5433 3333 89999999999998 44444
No 101
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.8e-33 Score=256.81 Aligned_cols=254 Identities=19% Similarity=0.247 Sum_probs=212.4
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
....+.+|.++|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|++++|+|++++|++++.|+.|++||+
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-ceeEEeecccCceeEEEEec-CCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEe----cCCeEEEee
Q 023772 90 STG-RVIRKFRGHESEVNAVKFNE-YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL----TKTEIIGGS 163 (277)
Q Consensus 90 ~~~-~~~~~~~~h~~~v~~i~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~ 163 (277)
+++ .....+.+|..+|.+++|+| +++.+++++.||+|++||+....... .....+...+..+.+ ++..+++++
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF-TLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE-EEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee-EEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 987 67788899999999999999 78899999999999999997654322 222223355555555 445699999
Q ss_pred cCCcEEEEEccCCccccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCc
Q 023772 164 VDGTVRTFDIRVGRELSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA 241 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (277)
.||.|++||++.++.+.. .+..++.+++|+|++++|++++.||.|++||..+++.+..+..+... ...++++|++.
T Consensus 206 ~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~ 283 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER--SWCIATHPTGR 283 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSS--EEEEEECTTCG
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCc--EEEEEEccCCC
Confidence 999999999988765443 35568999999999999999999999999999999999988877543 45567788876
Q ss_pred --eEEeecCCCeEEEEECcCccceeeec
Q 023772 242 --HVTGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 242 --~l~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
++++|+ |+.+.+|++........+.
T Consensus 284 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 310 (814)
T 3mkq_A 284 KNYIASGF-DNGFTVLSLGNDEPTLSLD 310 (814)
T ss_dssp GGEEEEEE-TTEEEEEECSCCSCCEEEC
T ss_pred ceEEEEEe-CCCEEEEEcCCCCceeEEC
Confidence 355554 6678899987765544443
No 102
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=240.14 Aligned_cols=244 Identities=14% Similarity=0.252 Sum_probs=189.8
Q ss_pred cceeeccC------------CcEEEEEEeCCC--CEEEEEeCCCcEEEEcCCCCeeE-----------------------
Q 023772 11 ANVLKGHE------------GAVLAARFNGDG--NYCLSCGKDRTIRLWNPHRGIHI----------------------- 53 (277)
Q Consensus 11 ~~~l~~H~------------~~V~~~~~~~~~--~~l~s~s~d~~v~iwd~~~~~~~----------------------- 53 (277)
...+.+|. ++|.+++|+|++ .+|++++.|++|++||+.++...
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 153 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLR 153 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCC
T ss_pred ecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceE
Confidence 45678998 889999999998 79999999999999998764331
Q ss_pred ----------------EE-EeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeE-------EeecccCceeEE
Q 023772 54 ----------------KT-YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST-GRVIR-------KFRGHESEVNAV 108 (277)
Q Consensus 54 ----------------~~-~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~-~~~~~-------~~~~h~~~v~~i 108 (277)
+. ..+|...|.+++|+|++++|++| .|++|++||+++ ++.+. .+.+|...|.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 232 (447)
T 3dw8_B 154 VPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAA 232 (447)
T ss_dssp CCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEE
T ss_pred eccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEE
Confidence 12 36799999999999999999998 799999999984 44444 356899999999
Q ss_pred EEecCC-CEEEEEeCCCcEEEEeCccCCCc--ceEeeccccC------------cEEEEEecCC--eEEEeecCCcEEEE
Q 023772 109 KFNEYS-SVVVSAGYDQSLRAWDCRSHSTE--PIQIIDSFQD------------SVMSVCLTKT--EIIGGSVDGTVRTF 171 (277)
Q Consensus 109 ~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~~------------~~~~~~~~~~--~~~~g~~d~~i~i~ 171 (277)
+|+|++ +++++|+.||+|++||++..... ....+..+.. .+..+.++++ .+++++. +.|++|
T Consensus 233 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 233 EFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVW 311 (447)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred EECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence 999998 99999999999999999875431 1344555544 7888888764 5888888 999999
Q ss_pred EccC-CcccccCCCC-----------------CeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccc-------
Q 023772 172 DIRV-GRELSDDLGQ-----------------PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI------- 226 (277)
Q Consensus 172 d~~~-~~~~~~~~~~-----------------~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------- 226 (277)
|++. ++.+.....+ .+..++|+|++++|++|+.||.|++||+.+++.+. +.++.
T Consensus 312 d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~ 390 (447)
T 3dw8_B 312 DLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRT 390 (447)
T ss_dssp ETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTC
T ss_pred eCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccccccc
Confidence 9987 5443322111 13348999999999999999999999999887763 22221
Q ss_pred ------------------------cceeeeeeEecCCCceEEeecCCCeEEEEECc
Q 023772 227 ------------------------CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 227 ------------------------~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~ 258 (277)
.......++++|++.+||+|+.++ +++|.-+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 391 VLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp BCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 011235578999999999998876 8888653
No 103
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.7e-34 Score=234.97 Aligned_cols=219 Identities=22% Similarity=0.342 Sum_probs=172.8
Q ss_pred EEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--eeEEeecccCceeEEEEec--CCCEEEEEeCCCcEEEEe
Q 023772 55 TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR--VIRKFRGHESEVNAVKFNE--YSSVVVSAGYDQSLRAWD 130 (277)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~--~~~~~~~h~~~v~~i~~~~--~~~~l~s~~~d~~i~iwd 130 (277)
.+.+|.++|++++|+|++++|++|+.|++|++||+++++ ++.++.+|..+|++++|++ ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998764 5678999999999999975 489999999999999999
Q ss_pred CccCCCcceEeeccccCcEEEEEecCC----eEEEeecCCcEEEEEccCCcc-----cccCCCCCeeEEEEeCC------
Q 023772 131 CRSHSTEPIQIIDSFQDSVMSVCLTKT----EIIGGSVDGTVRTFDIRVGRE-----LSDDLGQPVNCISMSND------ 195 (277)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~d~~i~i~d~~~~~~-----~~~~~~~~v~~~~~s~~------ 195 (277)
++.........+..|...+.++.+++. .+++|+.|++|++||++.... ....+...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 986544455556678888888888764 599999999999999986532 12234567899999997
Q ss_pred -----------CCEEEEEecCCeEEEEECCCC---ceEEEEeccccceeeeeeEecCCC----ceEEeecCCCeEEEEEC
Q 023772 196 -----------GNCILASCLDSTLRLLDRSTG---ELLQEYKGHICKSFKTDCCLTNSD----AHVTGGSEDGYIYFWDL 257 (277)
Q Consensus 196 -----------~~~l~~~~~d~~i~~wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~l~sgs~d~~i~iwd~ 257 (277)
+++|++|+.|+.|++||++.. +++..+.+|.. .+..++++|++ .+|++|+.|+.|++||+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~--~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD--WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS--CEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC--ceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 468999999999999999754 45667778854 34567788876 78999999999999999
Q ss_pred cCc---c-ceeeeccCcceeEe
Q 023772 258 VDA---S-VVAKFKAHSLVVKL 275 (277)
Q Consensus 258 ~~~---~-~~~~~~~h~~~v~~ 275 (277)
.+. . ....+.+|...|..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~ 267 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFNDVVWH 267 (316)
T ss_dssp SSTTCCCCBCCEEEECSSCEEE
T ss_pred cCccccchhhhhhhcCCCcEEE
Confidence 873 1 22445567665543
No 104
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-34 Score=238.08 Aligned_cols=229 Identities=13% Similarity=0.118 Sum_probs=179.4
Q ss_pred EEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC---------CCcee
Q 023772 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS---------TGRVI 95 (277)
Q Consensus 25 ~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~---------~~~~~ 95 (277)
.+.+++.++++|+.||+|++||+.+++.+..+. ...|.++.++|. +++++.|++|++|+.. +++.+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 344678899999999999999999998888876 467888888887 9999999999999765 45545
Q ss_pred EEee-cccCceeEEEEec--CCCEEEEEeCCCcEEEEeCccCCCcceEee-ccccCcEEEEEecC--CeEEEeecCCcEE
Q 023772 96 RKFR-GHESEVNAVKFNE--YSSVVVSAGYDQSLRAWDCRSHSTEPIQII-DSFQDSVMSVCLTK--TEIIGGSVDGTVR 169 (277)
Q Consensus 96 ~~~~-~h~~~v~~i~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~g~~d~~i~ 169 (277)
..+. .|..+|.+++++| +++++++++.||+|++||++.... .... ..+...+.++.+++ ..+++|+.||.|+
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE--EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 4444 6778999999999 999999999999999999986543 3322 23344566666655 4588999999999
Q ss_pred EEEccCCccc---ccC-CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEec---cccceeeeeeEecCCCce
Q 023772 170 TFDIRVGREL---SDD-LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG---HICKSFKTDCCLTNSDAH 242 (277)
Q Consensus 170 i~d~~~~~~~---~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 242 (277)
+||+++++.. ... +..+|++++|+|++.+|++++ |+.|++||+++++.+..+.. |........++++|++.+
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 9999988755 223 567999999999999999999 55999999998877655443 221111134789999999
Q ss_pred EEeecC-CCeEEEEECcCcc
Q 023772 243 VTGGSE-DGYIYFWDLVDAS 261 (277)
Q Consensus 243 l~sgs~-d~~i~iwd~~~~~ 261 (277)
+++++. |+.|++|++.+..
T Consensus 275 l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 275 MIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EEEEETTTTEEEEEEECTTT
T ss_pred EEEecCCCCcEEEEEEcccc
Confidence 999888 9999999986653
No 105
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-33 Score=255.80 Aligned_cols=241 Identities=8% Similarity=0.064 Sum_probs=193.8
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG 92 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~ 92 (277)
...||.+.|.+++|+|++++||+|+.||+|+||+..+++....+ .|..+|.+++|+| +++|++++.|++|++||++++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC
Confidence 34689999999999999999999999999999999887766554 4788999999999 889999999999999999999
Q ss_pred ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcce---------EeeccccCcEEEEEecCC---eEE
Q 023772 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPI---------QIIDSFQDSVMSVCLTKT---EII 160 (277)
Q Consensus 93 ~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~~~~~~~~~~---~~~ 160 (277)
+++.++. |...|++++|+|+++++++|+.||+|++||++....... .....|...+.++.+++. .++
T Consensus 90 ~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~ 168 (902)
T 2oaj_A 90 KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVL 168 (902)
T ss_dssp SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEE
T ss_pred cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEE
Confidence 9988886 778999999999999999999999999999976532111 112446678888998874 488
Q ss_pred EeecCCcEEEEEccCCcccccC--------------------CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEE
Q 023772 161 GGSVDGTVRTFDIRVGRELSDD--------------------LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~~~~~~~--------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~ 220 (277)
+|+.|+.+ +||++.++.+... +...|++++|+|+|++|++++.|+.|++||+++++++.
T Consensus 169 ~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 169 ISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp EECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 99999999 9999887643221 12569999999999999999999999999999988875
Q ss_pred E--Ee---ccc-----------cceeeeeeEec----CCC-ceEEeecCC-----CeEEEEEC
Q 023772 221 E--YK---GHI-----------CKSFKTDCCLT----NSD-AHVTGGSED-----GYIYFWDL 257 (277)
Q Consensus 221 ~--~~---~~~-----------~~~~~~~~~~~----~~~-~~l~sgs~d-----~~i~iwd~ 257 (277)
. +. .|. ....+..++++ |++ .++++|+.| +.+++|++
T Consensus 248 ~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 248 ARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred EEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 4 21 121 11123444553 443 567888665 37889984
No 106
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=233.54 Aligned_cols=242 Identities=16% Similarity=0.236 Sum_probs=194.4
Q ss_pred ceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEE--cCCCCEEEEEeCCCcEEEEEC
Q 023772 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHV--TADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~t~s~d~~v~~wd~ 89 (277)
..+.+|.++|.+++|+|++++|++++.|+.|++||+.+++... +..|..+|.+++| ++++.+|++++.|+.|++||+
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 158 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDT 158 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECS
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEEC
Confidence 5678999999999999999999999999999999999988665 5669999999999 899999999999999999999
Q ss_pred CCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeec--cccCcEEEEEecCCe----EEEee
Q 023772 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIID--SFQDSVMSVCLTKTE----IIGGS 163 (277)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~g~ 163 (277)
.+++++..+..|. .+.++.+. ...++.++.|+.+++|+++........... .+...+..+...... +++++
T Consensus 159 ~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (368)
T 3mmy_A 159 RSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235 (368)
T ss_dssp SCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec
Confidence 9999998888765 55556655 458888999999999999764322111111 122334444444433 99999
Q ss_pred cCCcEEEEEccCCcc---ccc--CCC------------CCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccc
Q 023772 164 VDGTVRTFDIRVGRE---LSD--DLG------------QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHI 226 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~---~~~--~~~------------~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 226 (277)
.|+.|++||++.... ... .+. .+|++++|+|++++|++++.||.|++||+.+++++..+.+|.
T Consensus 236 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 315 (368)
T 3mmy_A 236 IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD 315 (368)
T ss_dssp TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS
T ss_pred CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC
Confidence 999999999987632 111 111 169999999999999999999999999999999999998875
Q ss_pred cceeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 227 CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
. ....++++|++.+|++|+.|+..+.|++.+
T Consensus 316 ~--~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 316 Q--PISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp S--CEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred C--CceEEEECCCCCeEEEEecccccccccccC
Confidence 4 456678999999999999998766665544
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-34 Score=260.63 Aligned_cols=253 Identities=13% Similarity=0.098 Sum_probs=196.5
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeE--EEE----e-----ccCccEEEEEEcCCCCEEEEEeCC
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI--KTY----K-----SHGREVRDVHVTADNSKLISCGGD 81 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~--~~~----~-----~h~~~v~~~~~~~~~~~l~t~s~d 81 (277)
.+.||...+..++|+|++++|+||+.|++||+||+.++... ..+ . +|...|++++|+|++++|++|+.|
T Consensus 430 ~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~D 509 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIET 509 (902)
T ss_dssp SCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETT
T ss_pred cccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecC
Confidence 46788888888888999999999999999999998876421 111 1 788999999999999999999999
Q ss_pred CcEEEEECCCC---------------------------------------------ceeEEeecccCceeEEEEecCCCE
Q 023772 82 RQIFYWDVSTG---------------------------------------------RVIRKFRGHESEVNAVKFNEYSSV 116 (277)
Q Consensus 82 ~~v~~wd~~~~---------------------------------------------~~~~~~~~h~~~v~~i~~~~~~~~ 116 (277)
++|++||+.++ +++..+.+|..+|++++|+|++ +
T Consensus 510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~ 588 (902)
T 2oaj_A 510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F 588 (902)
T ss_dssp SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E
T ss_pred cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E
Confidence 99999999766 2467788899999999999999 9
Q ss_pred EEEEeCCCcEEEEeCccCCCcce---Eeec-cccCcEEEEEec-----CC-----eEEEeecCCcEEEEEc---cCCccc
Q 023772 117 VVSAGYDQSLRAWDCRSHSTEPI---QIID-SFQDSVMSVCLT-----KT-----EIIGGSVDGTVRTFDI---RVGREL 179 (277)
Q Consensus 117 l~s~~~d~~i~iwd~~~~~~~~~---~~~~-~~~~~~~~~~~~-----~~-----~~~~g~~d~~i~i~d~---~~~~~~ 179 (277)
|++|+.|++|++||++....... ..+. .|...|.++.|+ ++ .+++|+.|++|++||+ .+++..
T Consensus 589 lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~ 668 (902)
T 2oaj_A 589 VGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFD 668 (902)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEE
T ss_pred EEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEE
Confidence 99999999999999865422110 1122 677789999998 64 5999999999999998 555432
Q ss_pred cc-------CCCCCeeEEE-Ee----------------------CCCCEEEEEecCCeEEEEECCCCceEEEEeccccce
Q 023772 180 SD-------DLGQPVNCIS-MS----------------------NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229 (277)
Q Consensus 180 ~~-------~~~~~v~~~~-~s----------------------~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 229 (277)
.. .+..+|..++ |+ +++.. ++++ +..||+|++.++++.+...+|.+..
T Consensus 669 ~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~-l~~~-~~~ir~~~~~~~k~~~k~~~~~~~~ 746 (902)
T 2oaj_A 669 VQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIV-LITG-FDDIRLITLGKSKSTHKGFKYPLAA 746 (902)
T ss_dssp EEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEE-EEEC-SSEEEEECTTCCCEEEEECSSCEEE
T ss_pred EEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEE-EEEe-ccceEEEeCccccceeeEcccceee
Confidence 11 1235666665 65 44543 3333 7799999999999987776664322
Q ss_pred eeee-eE------ecCCCceEEeecCCCeEEEEECcCccceeeecc
Q 023772 230 FKTD-CC------LTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 230 ~~~~-~~------~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~ 268 (277)
..+. .. +++++..|++++.||.|++|++.+++++.+++.
T Consensus 747 ~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~ 792 (902)
T 2oaj_A 747 TGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHI 792 (902)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eEEEEEEeccccccccCceEEEEEeCCCcEEEEECcchHHHhhccC
Confidence 2210 12 467788999999999999999999999988875
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-32 Score=233.01 Aligned_cols=240 Identities=13% Similarity=0.149 Sum_probs=196.2
Q ss_pred eccCCcEEEEEEeCCCCEE-EEEeCCCcEEEEcCC--CCeeEEEEe--ccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 15 KGHEGAVLAARFNGDGNYC-LSCGKDRTIRLWNPH--RGIHIKTYK--SHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 15 ~~H~~~V~~~~~~~~~~~l-~s~s~d~~v~iwd~~--~~~~~~~~~--~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
.+|.+.|.+++|+|++++| ++++.|+.|++||+. ++..+..+. .|...|.+++|+|++++|++++.|+.+++|++
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 4688899999999999996 899999999999998 888888876 56789999999999999999999999999999
Q ss_pred CCCceeE----EeecccCceeEEEEecC---CCEEEEEeCCCcEEEEeCccCCCcceEe-eccccCcEEEEEec-CCeEE
Q 023772 90 STGRVIR----KFRGHESEVNAVKFNEY---SSVVVSAGYDQSLRAWDCRSHSTEPIQI-IDSFQDSVMSVCLT-KTEII 160 (277)
Q Consensus 90 ~~~~~~~----~~~~h~~~v~~i~~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~ 160 (277)
.+++... .+.+|...|.+++|+|+ +++|++++.|++|++||++.... ... ...|...+..+.++ +..++
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~sd~~~l~ 256 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI--VDKWLFGHKHFVSSICCGKDYLLL 256 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC--EEEECCCCSSCEEEEEECSTTEEE
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce--eeeeecCCCCceEEEEECCCCEEE
Confidence 8877554 78889999999999999 99999999999999999976532 333 44677788888775 66799
Q ss_pred EeecCCcEEEEEccCCccccc---------------------------CCCCCeeEEEEeCCCCEEEEEe-cCCeEEEEE
Q 023772 161 GGSVDGTVRTFDIRVGRELSD---------------------------DLGQPVNCISMSNDGNCILASC-LDSTLRLLD 212 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~~~~~~---------------------------~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~wd 212 (277)
+++.|++|++||+++++.+.. .....+.+++|+|++++|++++ .|+.|++||
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 999999999999988764321 1124688999999999999998 899999999
Q ss_pred C--CCC---ceEEEEeccccceeeeeeEecCCCceEEeecC------CCeEEEEECcC
Q 023772 213 R--STG---ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE------DGYIYFWDLVD 259 (277)
Q Consensus 213 ~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~------d~~i~iwd~~~ 259 (277)
+ .++ +.+..+.++ .....++++|++.+++.++. ++.|++|.+..
T Consensus 337 ~~~~~~~~l~~~~~~~~~---~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFP---YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp ECSSSTTCEEEEEEEECS---SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred eccCCCCceeeccEeccC---CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 9 555 666777766 23466778886555555543 55688887653
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-33 Score=237.11 Aligned_cols=232 Identities=10% Similarity=0.096 Sum_probs=183.9
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe-----------------------------eEEEEe-ccCccEEE
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-----------------------------HIKTYK-SHGREVRD 65 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~-----------------------------~~~~~~-~h~~~v~~ 65 (277)
.-...|.+++|+|||+++||+|.|++|| |...++ ....+. .|...|.+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 3457889999999999999999999995 433222 111222 45778999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccC-----ceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc---
Q 023772 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHES-----EVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE--- 137 (277)
Q Consensus 66 ~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~-----~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--- 137 (277)
++|+|++++|++++.||.|++||.++ ++..+. |.. .|.+++|+|++++|++|+.||+|++||+......
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 99999999999999999999999654 666677 665 4999999999999999999999999999865320
Q ss_pred --ceEee----ccccCcEEEEEecCCeEEEeecCCcEEEEEccCCccc------ccCCCCCeeEEEEeCCCCEEEEEecC
Q 023772 138 --PIQII----DSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGREL------SDDLGQPVNCISMSNDGNCILASCLD 205 (277)
Q Consensus 138 --~~~~~----~~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~------~~~~~~~v~~~~~s~~~~~l~~~~~d 205 (277)
.+..+ .+|...|.+++++|+.+++++.|+++++||+..+... ...+...|.+++|+ |+.|++++ +
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~ 244 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-P 244 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-S
T ss_pred ceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-C
Confidence 13333 4566789999999888989999999999999876632 12345679999999 68888887 6
Q ss_pred CeEEEEECCCCceEEEEeccccceeeeeeEe--cCCCceEEeecCCCeEEEEECc
Q 023772 206 STLRLLDRSTGELLQEYKGHICKSFKTDCCL--TNSDAHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 206 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~sgs~d~~i~iwd~~ 258 (277)
++|++||...++......+|... .....+ +|++..++++++||+ ++|..+
T Consensus 245 ~tIkLWd~~~~~~~~~~~gh~~~--V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 245 GYVHKIDLKNYSISSLKTGSLEN--FHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp SEEEEEETTTTEEEEEECSCCSC--CCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred CeEEEEECCCCeEEEEEcCCCce--EEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999999987774433377543 344678 999999999999999 999986
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.4e-33 Score=236.02 Aligned_cols=239 Identities=13% Similarity=0.123 Sum_probs=169.0
Q ss_pred cCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEE-----EEeccCccEEEEEEcC--------CCCEEEEEeCCCc
Q 023772 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK-----TYKSHGREVRDVHVTA--------DNSKLISCGGDRQ 83 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~-----~~~~h~~~v~~~~~~~--------~~~~l~t~s~d~~ 83 (277)
|.+.+....+.+++.+|++++.|++||+||..++.... .+.+|.+.|++++|+| ++++|+|||.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 44444444455667789999999999999998876533 3578999999999997 7889999999999
Q ss_pred EEEEECCCCceeEEeecccCceeEEEEecCC-CEEEEEeCCCcEEEEeCccCCCcceE----------------------
Q 023772 84 IFYWDVSTGRVIRKFRGHESEVNAVKFNEYS-SVVVSAGYDQSLRAWDCRSHSTEPIQ---------------------- 140 (277)
Q Consensus 84 v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~---------------------- 140 (277)
|++||+.++.++..+..|..+|.+++|+|++ .+|++++.|++|++||++........
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 9999999888888888899999999999987 48999999999999998764321100
Q ss_pred -eeccccCcEEEEEe---cCCeEEEeecCCcEEEEEccCCcccccC--CC------------------CCeeEEEEeC--
Q 023772 141 -IIDSFQDSVMSVCL---TKTEIIGGSVDGTVRTFDIRVGRELSDD--LG------------------QPVNCISMSN-- 194 (277)
Q Consensus 141 -~~~~~~~~~~~~~~---~~~~~~~g~~d~~i~i~d~~~~~~~~~~--~~------------------~~v~~~~~s~-- 194 (277)
....+...+..+.+ ++..+++++.|+++++||+..++..... +. .......++|
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRY 327 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSC
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCC
Confidence 01123333444443 4567999999999999999765432110 00 0111223333
Q ss_pred CCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECc
Q 023772 195 DGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 195 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~ 258 (277)
++.++++|+.|+.|++||..+++++..+.+|.. .+..++|+|+|++||+++.|| +.+|.+.
T Consensus 328 ~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~--~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 328 MDYFATAHSQHGLIQLINTYEKDSNSIPIQLGM--PIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TTEEEEEETTTTEEEEEETTCTTCCEEEEECSS--CEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEecCCCC--cEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 344567788899999999999988887777754 356788999999999999776 5566553
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=9.2e-33 Score=222.80 Aligned_cols=210 Identities=14% Similarity=0.127 Sum_probs=153.1
Q ss_pred cCCcEEEEEEeCC----CCEEEEEeC--------------------CCcEEEEcC-CCCeeEEEEeccCccEEEEEEcC-
Q 023772 17 HEGAVLAARFNGD----GNYCLSCGK--------------------DRTIRLWNP-HRGIHIKTYKSHGREVRDVHVTA- 70 (277)
Q Consensus 17 H~~~V~~~~~~~~----~~~l~s~s~--------------------d~~v~iwd~-~~~~~~~~~~~h~~~v~~~~~~~- 70 (277)
|.+.|++++|+|+ +.++++++. |+.|++|++ .+|+.+..+..|...++.++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 3446677777777 777776553 899999998 44788888888999999999998
Q ss_pred --CCCEEEEEeCCCcEEEEECCCCceeEEeeccc---CceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccc
Q 023772 71 --DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHE---SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSF 145 (277)
Q Consensus 71 --~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~---~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 145 (277)
++++|+++|.|++||+||++++++++++.+|. ..+.+++|+|++.++++++.+.. +|+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w~--------------- 252 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KES--------------- 252 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------------------
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cce---------------
Confidence 77999999999999999999999999998654 36777899999998887765432 232
Q ss_pred cCcEEEEEecCCeEEEeecCCcEEEEEccCCccccc-----CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEE
Q 023772 146 QDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD-----DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220 (277)
Q Consensus 146 ~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~ 220 (277)
+++|+.|++|++||..+++.+.. ..++....+..+..+.++++++.|++|+|||+.++++++
T Consensus 253 -------------laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~ 319 (356)
T 2w18_A 253 -------------ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTA 319 (356)
T ss_dssp ------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEE
T ss_pred -------------eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 34567788888888877654321 112211123333347789999999999999999999999
Q ss_pred EEeccccceeeeeeEecCCCceEEeecCCCeEEEEEC
Q 023772 221 EYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257 (277)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~ 257 (277)
++.+|.... ...++|+|++++|++|+.|++||+||+
T Consensus 320 tL~gH~~~v-vs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 320 LLPPVSDQH-WSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EECCC--CC-CCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EecCCCCCe-EEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999886433 223579999999999999999999995
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.1e-31 Score=221.74 Aligned_cols=252 Identities=10% Similarity=0.119 Sum_probs=203.0
Q ss_pred ceeeccCCcEEEEEEeCCCCEE-EEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEEC
Q 023772 12 NVLKGHEGAVLAARFNGDGNYC-LSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDV 89 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~~~l-~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~ 89 (277)
..+.+|. .+.+++|+|+|+++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+|++++|+ +++.|+.|++||+
T Consensus 26 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 26 ATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp EEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEEC
Confidence 3455554 48999999999977 677899999999999999988888665 999999999999885 4556799999999
Q ss_pred CCCceeEEeecccCceeEEEEecCCCEE-EEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--eE-EEeecC
Q 023772 90 STGRVIRKFRGHESEVNAVKFNEYSSVV-VSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EI-IGGSVD 165 (277)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~i~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~g~~d 165 (277)
++++.+..+..| ..+.+++|+|+++.+ ++++.|+.|++||+.+... ...+.. ...+..+.++++ .+ ++++.+
T Consensus 104 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 104 TSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--INTVSV-GRSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp TTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEEC-CSSEEEEEECTTSSEEEEEETTT
T ss_pred CCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEec-CCCcceEEECCCCCEEEEEeCCC
Confidence 999988887754 467899999999977 7888899999999876532 223332 234466666544 45 577889
Q ss_pred CcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEe---cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCc
Q 023772 166 GTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASC---LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA 241 (277)
Q Consensus 166 ~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (277)
+.|++||+++++.... .....+.+++|+|++++|++++ .++.|++||+.+++.+..+..+.. ...++++|+++
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~s~dg~ 256 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD---PAGIAVTPDGK 256 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS---EEEEEECTTSS
T ss_pred CEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC---ccEEEEccCCC
Confidence 9999999988765433 2345789999999999998888 689999999999998888876642 34567899998
Q ss_pred eE-EeecCCCeEEEEECcCccceeeeccCcce
Q 023772 242 HV-TGGSEDGYIYFWDLVDASVVAKFKAHSLV 272 (277)
Q Consensus 242 ~l-~sgs~d~~i~iwd~~~~~~~~~~~~h~~~ 272 (277)
++ ++++.|+.|++||+.+++++..+..|..+
T Consensus 257 ~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 257 KVYVALSFXNTVSVIDTATNTITATMAVGKNP 288 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred EEEEEcCCCCEEEEEECCCCcEEEEEECCcCC
Confidence 77 67789999999999999999999887655
No 113
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-32 Score=225.74 Aligned_cols=224 Identities=19% Similarity=0.276 Sum_probs=182.4
Q ss_pred CeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC--CCceeEEeecccCceeEEEEecC--CCEEEEEeCCCc
Q 023772 50 GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS--TGRVIRKFRGHESEVNAVKFNEY--SSVVVSAGYDQS 125 (277)
Q Consensus 50 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~--~~~~~~~~~~h~~~v~~i~~~~~--~~~l~s~~~d~~ 125 (277)
|+.+..+.+|..+|++++|+|++++|++|+.|+.|++||++ +++.+..+.+|..+|.+++|+++ +++|++++.||.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 34567789999999999999999999999999999999998 56778889999999999999877 899999999999
Q ss_pred EEEEeCccCCCcceEeeccccCcEEEEEecCC----eEEEeecCCcEEEEEccCCccc----ccCCCCCeeEEEEeC---
Q 023772 126 LRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT----EIIGGSVDGTVRTFDIRVGREL----SDDLGQPVNCISMSN--- 194 (277)
Q Consensus 126 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~d~~i~i~d~~~~~~~----~~~~~~~v~~~~~s~--- 194 (277)
|++||+.............+...+..+.+++. .+++++.|+.|++||++..... ...+...+.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 99999987643455566677888888888754 5999999999999999876332 224567899999999
Q ss_pred ----------CCCEEEEEecCCeEEEEECCCCc----eEEEEeccccceeeeeeEecCC---CceEEeecCCCeEEEEEC
Q 023772 195 ----------DGNCILASCLDSTLRLLDRSTGE----LLQEYKGHICKSFKTDCCLTNS---DAHVTGGSEDGYIYFWDL 257 (277)
Q Consensus 195 ----------~~~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~l~sgs~d~~i~iwd~ 257 (277)
++.+|++++.|+.|++||+++++ ++..+.+|.. ....++++|+ +.++++++.||.|++||+
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC--cEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 69999999999999999997654 4456666643 3566788999 899999999999999999
Q ss_pred cCcc-----ceeeeccCcceeEe
Q 023772 258 VDAS-----VVAKFKAHSLVVKL 275 (277)
Q Consensus 258 ~~~~-----~~~~~~~h~~~v~~ 275 (277)
.++. .+.....|...|..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~ 261 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWR 261 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEE
T ss_pred CCCCccceeeeeccccCCCcEEE
Confidence 9864 22333346666543
No 114
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.9e-32 Score=225.86 Aligned_cols=198 Identities=12% Similarity=0.143 Sum_probs=163.6
Q ss_pred ccCCcEEEEEEeCCCCEEEE--EeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Q 023772 16 GHEGAVLAARFNGDGNYCLS--CGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR 93 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s--~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~ 93 (277)
.++..+.+++|+|||+++++ ++.|++|||||+.+++++..++ |.+.|.+++|+|+++++++++.+ .+.+|+..+++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~ 208 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGS 208 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCC
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCc
Confidence 45566899999999999864 5579999999999999988886 77899999999999999999855 56777777766
Q ss_pred eeE--EeecccCceeEEEEecCCCEEEEEeCCC----cEEEEeCccCCCc--ceEeeccccCcEEEEEecCC--eEEEee
Q 023772 94 VIR--KFRGHESEVNAVKFNEYSSVVVSAGYDQ----SLRAWDCRSHSTE--PIQIIDSFQDSVMSVCLTKT--EIIGGS 163 (277)
Q Consensus 94 ~~~--~~~~h~~~v~~i~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~g~ 163 (277)
.+. ....|...|.+++|+|+++.+++++.|+ .++.|++...... ....+..+...+.++.++++ .+++|+
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc
Confidence 543 3456888999999999999999999888 6888987654322 22335567778888887764 599999
Q ss_pred cCCcEEEEEccCCcccc---cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCC
Q 023772 164 VDGTVRTFDIRVGRELS---DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRST 215 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~ 215 (277)
.|++|++||+++++.+. ..+..+|++++|+|+|++|++||.|++|||||+..
T Consensus 289 ~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 289 NDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999999887654 34677999999999999999999999999999854
No 115
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1e-31 Score=220.80 Aligned_cols=213 Identities=17% Similarity=0.238 Sum_probs=180.9
Q ss_pred ccceeeccCCcEEEEEEeC--CCCEEEEEeCCCcEEEEcCCCC---------eeEEEEeccCccEEEEEEcCC--CCEEE
Q 023772 10 EANVLKGHEGAVLAARFNG--DGNYCLSCGKDRTIRLWNPHRG---------IHIKTYKSHGREVRDVHVTAD--NSKLI 76 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~--~~~~l~s~s~d~~v~iwd~~~~---------~~~~~~~~h~~~v~~~~~~~~--~~~l~ 76 (277)
....+.+|.++|.+++|+| ++++|++|+.|+.|++||+.++ +....+..|...|.+++|+|+ +.+|+
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 128 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA 128 (351)
T ss_dssp EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE
Confidence 3455689999999999999 6999999999999999999876 568888999999999999999 99999
Q ss_pred EEeCCCcEEEEECCCCceeEEee-------------cccCceeEEEEecC---CCEEEEEeCCCcEEEEeCccCCCcceE
Q 023772 77 SCGGDRQIFYWDVSTGRVIRKFR-------------GHESEVNAVKFNEY---SSVVVSAGYDQSLRAWDCRSHSTEPIQ 140 (277)
Q Consensus 77 t~s~d~~v~~wd~~~~~~~~~~~-------------~h~~~v~~i~~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~ 140 (277)
+++.|+.|++||+.+++.+..+. .|...+.++.|+|+ +.++++++.|+.+.+|+..........
T Consensus 129 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (351)
T 3f3f_A 129 CLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAA 208 (351)
T ss_dssp EEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred EecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeee
Confidence 99999999999998887654443 57889999999997 899999999999988887665444456
Q ss_pred eeccccCcEEEEEecCC------eEEEeecCCcEEEEEccCCc-------------------------------------
Q 023772 141 IIDSFQDSVMSVCLTKT------EIIGGSVDGTVRTFDIRVGR------------------------------------- 177 (277)
Q Consensus 141 ~~~~~~~~~~~~~~~~~------~~~~g~~d~~i~i~d~~~~~------------------------------------- 177 (277)
.+..+...+..+.+++. .+++|+.||.|++||++.+.
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceee
Confidence 66778888999998876 48999999999999998641
Q ss_pred ---------ccc--cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEE
Q 023772 178 ---------ELS--DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEY 222 (277)
Q Consensus 178 ---------~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 222 (277)
.+. ..+...|++++|+|++++|++++.||.|++||+.+++..+.+
T Consensus 289 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 289 ELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp --CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred eecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 111 124568999999999999999999999999999988665544
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.9e-31 Score=222.38 Aligned_cols=239 Identities=15% Similarity=0.255 Sum_probs=170.2
Q ss_pred eccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCC---CEEEEEeCCCcEEEEECC
Q 023772 15 KGHEGAVLAARFNG-DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN---SKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 15 ~~H~~~V~~~~~~~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~t~s~d~~v~~wd~~ 90 (277)
.+|.++|.+++|+| ++.++++++.|+.|++||+.+++....+. +...+.++.+.+.+ .++++++.|+.|++||++
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 36999999999999 77899999999999999999998888876 67889999999854 499999999999999999
Q ss_pred CCceeEEeecccCceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcceEee---------------ccccCcEEEEEe
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEPIQII---------------DSFQDSVMSVCL 154 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~---------------~~~~~~~~~~~~ 154 (277)
+++.+..+..|..+|.+++|+|+++ ++++++.||.|++||++.... ....+ ..+...+..+.+
T Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASG-CLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSC-CSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCc-ccccccccccccceeeccccccccCceeEEEE
Confidence 9999999999999999999999988 589999999999999976432 11111 346677888888
Q ss_pred cCC--eEEEeecCCcEEEEEccCCcccc-------------------------------------------------cCC
Q 023772 155 TKT--EIIGGSVDGTVRTFDIRVGRELS-------------------------------------------------DDL 183 (277)
Q Consensus 155 ~~~--~~~~g~~d~~i~i~d~~~~~~~~-------------------------------------------------~~~ 183 (277)
+++ .+++++.|+.|++||+++++... ..+
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 333 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH 333 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence 654 59999999999999998654221 113
Q ss_pred CCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 184 GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 184 ~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
..+|++++|+|++++|++++.||.|++||+.+++.+......... ... .........+...|+.+++|+...
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQL-NPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------------------------------------------
T ss_pred CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec---ccc-ccccceeecccCccCceeecCCcc
Confidence 457999999999999999999999999999998877655433211 111 112334456677899999998763
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-33 Score=236.82 Aligned_cols=192 Identities=9% Similarity=0.115 Sum_probs=161.5
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCc-----cEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR-----EVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
+|+..|.+++|+|+|.+|++++.||+|++||... ++..+. |.. .+.+++|+|++++|++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 6788999999999999999999999999999544 666677 665 49999999999999999999999999999
Q ss_pred CCce-------eEEe----ecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc-ceEee-ccccCcEEEEEecCC
Q 023772 91 TGRV-------IRKF----RGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE-PIQII-DSFQDSVMSVCLTKT 157 (277)
Q Consensus 91 ~~~~-------~~~~----~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 157 (277)
++.. +.++ .+|...|.+++|+|++ +++++.|++|++||+...... ....+ ..+...|.++.+.++
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~ 237 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDY 237 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETT
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECC
Confidence 8753 5676 6778899999999999 888999999999999765432 12333 356677888888766
Q ss_pred eEEEeecCCcEEEEEccCCcc-ccc-CCCCCeeEEEE--eCCCCEEEEEecCCeEEEEECC
Q 023772 158 EIIGGSVDGTVRTFDIRVGRE-LSD-DLGQPVNCISM--SNDGNCILASCLDSTLRLLDRS 214 (277)
Q Consensus 158 ~~~~g~~d~~i~i~d~~~~~~-~~~-~~~~~v~~~~~--s~~~~~l~~~~~d~~i~~wd~~ 214 (277)
.+++++ +++|++||+..++. ... .+...+..+.| +|++..|+++++||+ ++|...
T Consensus 238 ~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 238 KVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 788776 79999999987765 322 56678999999 999999999999999 999975
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-31 Score=216.36 Aligned_cols=229 Identities=12% Similarity=0.046 Sum_probs=174.4
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCC---------CCeeEEEEe-ccCccEEEEEEcC--CCCEEEEEeCCCcEEE
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPH---------RGIHIKTYK-SHGREVRDVHVTA--DNSKLISCGGDRQIFY 86 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~---------~~~~~~~~~-~h~~~v~~~~~~~--~~~~l~t~s~d~~v~~ 86 (277)
++|.++.|+|+ +++++.|+++++|+.. +++.+..+. .|..+|.+++|+| +++++++++.|++|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 45666667776 8999999999999655 455454544 6778999999999 9999999999999999
Q ss_pred EECCCCceeEEee-cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeecc-ccCcEEEEEecCC--eEEEe
Q 023772 87 WDVSTGRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDS-FQDSVMSVCLTKT--EIIGG 162 (277)
Q Consensus 87 wd~~~~~~~~~~~-~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~g 162 (277)
||+++++++..+. .|...+.+++|+|++.++++|+.||.|++||+++..... ..+.. |...+..+.++++ .++++
T Consensus 154 wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~l~s~ 232 (343)
T 3lrv_A 154 QSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWMVVE 232 (343)
T ss_dssp EESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC-EECCCCTTSCEEEEEECTTSSEEEEE
T ss_pred EECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCEEEEE
Confidence 9999998876664 456689999999999999999999999999998764331 33444 7889999988765 57888
Q ss_pred ecCCcEEEEEccCCcccccCC-----CCCe--eEEEEeCCCCEEEEEec-CCeEEEEECCCCceEEEEeccccceeeeee
Q 023772 163 SVDGTVRTFDIRVGRELSDDL-----GQPV--NCISMSNDGNCILASCL-DSTLRLLDRSTGELLQEYKGHICKSFKTDC 234 (277)
Q Consensus 163 ~~d~~i~i~d~~~~~~~~~~~-----~~~v--~~~~~s~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
+ |+.|++||+++.+.+.... ..++ .+++|+|+|++|++++. |+.+++|++......... ......
T Consensus 233 ~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~------~~~~~~ 305 (343)
T 3lrv_A 233 C-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK------DEESAL 305 (343)
T ss_dssp E-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE------EEEEEC
T ss_pred e-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe------cCceeE
Confidence 8 5699999999876543221 1233 36999999999999998 999999999665433222 112233
Q ss_pred EecC---CCceEEeecCCCeEEEEECc
Q 023772 235 CLTN---SDAHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 235 ~~~~---~~~~l~sgs~d~~i~iwd~~ 258 (277)
.+.+ +...+++++.|+.++++-..
T Consensus 306 ~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 306 CLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp CC----CCCCEEEEEEETTEEEEEEEC
T ss_pred ecCccccccceeEEEecCCceEEEEec
Confidence 4555 77889999999999987544
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=1.2e-29 Score=215.59 Aligned_cols=239 Identities=13% Similarity=0.077 Sum_probs=195.9
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCC
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVSTG 92 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~ 92 (277)
+.+|.+.|.+++|++++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|++++++ +++.|+.|++||+.++
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 458999999999999999999999999999999999999999999999999999999999885 4558999999999999
Q ss_pred ceeEEeecccCceeEEEEecCCCEEEEEe--------CCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--e-EEE
Q 023772 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAG--------YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--E-IIG 161 (277)
Q Consensus 93 ~~~~~~~~h~~~v~~i~~~~~~~~l~s~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 161 (277)
+.+..+..+ ..+.+++++|+++.+++++ .|+.|++||++.... .... .+...+..+.++++ . +++
T Consensus 245 ~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~--~~~~-~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 245 LEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL--IDTI-GPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp EEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE--EEEE-EEEECEEEEEECSSTTEEEEE
T ss_pred cEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE--Eeec-cCCCCcceEEECCCCCEEEEE
Confidence 988877754 4589999999999999888 588999999976432 2222 22335556666543 3 566
Q ss_pred eecCCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEec---------------CCeEEEEECCCCceEEEEecc
Q 023772 162 GSVDGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCL---------------DSTLRLLDRSTGELLQEYKGH 225 (277)
Q Consensus 162 g~~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~---------------d~~i~~wd~~~~~~~~~~~~~ 225 (277)
++.|+.|++||+.+++.... .....+.+++|+|+|+++++++. ||.|++||..+++.+..+..+
T Consensus 321 ~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~ 400 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG 400 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS
T ss_pred ecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC
Confidence 78999999999987765432 34567899999999999888876 579999999999998888764
Q ss_pred ccceeeeeeEecCCCceEEeec-CCCeEEEEECcC
Q 023772 226 ICKSFKTDCCLTNSDAHVTGGS-EDGYIYFWDLVD 259 (277)
Q Consensus 226 ~~~~~~~~~~~~~~~~~l~sgs-~d~~i~iwd~~~ 259 (277)
. ....++++|+++++++++ .|+.|++|+++.
T Consensus 401 ~---~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 401 N---QPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp S---SEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred C---CCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 2 345677899999988765 599999999863
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=7.4e-31 Score=220.88 Aligned_cols=252 Identities=17% Similarity=0.228 Sum_probs=172.8
Q ss_pred EEEEE---eCCCCEEEEEeCCCcEEEEcCCC-------Ce---eEEEEeccCccEEEEEE--------------------
Q 023772 22 LAARF---NGDGNYCLSCGKDRTIRLWNPHR-------GI---HIKTYKSHGREVRDVHV-------------------- 68 (277)
Q Consensus 22 ~~~~~---~~~~~~l~s~s~d~~v~iwd~~~-------~~---~~~~~~~h~~~v~~~~~-------------------- 68 (277)
.++.| ++++..+++++.|+.|++|+... +. .+..+ .+..++..+.+
T Consensus 19 ~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (393)
T 4gq1_A 19 YTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTI-QTGLPTLHLSFSSSCSYSENLHDGDGNVNSS 97 (393)
T ss_dssp EEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEE-ECSSCEEEEEECTTCEEECC----------C
T ss_pred eEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEE-ecCCCeeeEeecCCccccccccCCCcceeec
Confidence 34555 44555566666788899996421 11 11111 23334444443
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcee-----EEeecccCceeEEEEec--------CCCEEEEEeCCCcEEEEeCccCC
Q 023772 69 TADNSKLISCGGDRQIFYWDVSTGRVI-----RKFRGHESEVNAVKFNE--------YSSVVVSAGYDQSLRAWDCRSHS 135 (277)
Q Consensus 69 ~~~~~~l~t~s~d~~v~~wd~~~~~~~-----~~~~~h~~~v~~i~~~~--------~~~~l~s~~~d~~i~iwd~~~~~ 135 (277)
.+++.+|++++.|++|++||+++++.. ..+.+|...|++++|+| ++++|+||+.|++|++||++...
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 345567999999999999999887653 34678999999999997 78899999999999999987543
Q ss_pred CcceEeeccccCcEEEEEecCC---eEEEeecCCcEEEEEccCCccccc---------------------------CCCC
Q 023772 136 TEPIQIIDSFQDSVMSVCLTKT---EIIGGSVDGTVRTFDIRVGRELSD---------------------------DLGQ 185 (277)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~d~~i~i~d~~~~~~~~~---------------------------~~~~ 185 (277)
+......+...+.++.+.|. .+++|+.|++|++||+++++.... .+..
T Consensus 178 --~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 178 --PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp --EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred --eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 34445567778888888764 489999999999999987643211 1234
Q ss_pred CeeEEEEe-CCCCEEEEEecCCeEEEEECCCCceEEEEeccccce----------------eeeeeEecC--CCceEEee
Q 023772 186 PVNCISMS-NDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS----------------FKTDCCLTN--SDAHVTGG 246 (277)
Q Consensus 186 ~v~~~~~s-~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~----------------~~~~~~~~~--~~~~l~sg 246 (277)
.+.++.|+ |+++.|++++.|+++++||+..++....+..|.... ....+++.+ ++.++++|
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 57888887 799999999999999999998876665554432111 111122332 45678899
Q ss_pred cCCCeEEEEECcCccceeeeccCcceeEee
Q 023772 247 SEDGYIYFWDLVDASVVAKFKAHSLVVKLL 276 (277)
Q Consensus 247 s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 276 (277)
+.||.|++||+.+++.+..+.+|..+|+-+
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~sv 365 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDF 365 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSSCEEEE
T ss_pred CCCCEEEEEECCCCcEEEEecCCCCcEEEE
Confidence 999999999999999999999998888754
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-30 Score=235.15 Aligned_cols=220 Identities=19% Similarity=0.276 Sum_probs=179.5
Q ss_pred EEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC--CCceeEEeecccCceeEEEEecC--CCEEEEEeCCCcEEE
Q 023772 53 IKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS--TGRVIRKFRGHESEVNAVKFNEY--SSVVVSAGYDQSLRA 128 (277)
Q Consensus 53 ~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~--~~~~~~~~~~h~~~v~~i~~~~~--~~~l~s~~~d~~i~i 128 (277)
...+.+|.++|++++|+|++++|++|+.||+|++||+. +++.+..+.+|..+|.+++|+++ ++++++|+.||+|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 34678999999999999999999999999999999998 55778889999999999999988 899999999999999
Q ss_pred EeCccCCCcceEeeccccCcEEEEEecCC----eEEEeecCCcEEEEEccCCccc----ccCCCCCeeEEEEeC------
Q 023772 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKT----EIIGGSVDGTVRTFDIRVGREL----SDDLGQPVNCISMSN------ 194 (277)
Q Consensus 129 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~d~~i~i~d~~~~~~~----~~~~~~~v~~~~~s~------ 194 (277)
||+.............+...+..+.+++. .+++|+.||.|++||++.+... ...+...+.+++|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 99987544455666778888988888754 5999999999999999876322 224567899999999
Q ss_pred -------CCCEEEEEecCCeEEEEECCCC----ceEEEEeccccceeeeeeEecCC---CceEEeecCCCeEEEEECcCc
Q 023772 195 -------DGNCILASCLDSTLRLLDRSTG----ELLQEYKGHICKSFKTDCCLTNS---DAHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 195 -------~~~~l~~~~~d~~i~~wd~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sgs~d~~i~iwd~~~~ 260 (277)
++.++++|+.||.|++||++++ .+...+.+|.. .+..++++|+ +.++++|+.||.|++||+.++
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~--~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC--cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 5899999999999999999876 45566777754 3566778999 899999999999999999987
Q ss_pred c-----ceeeeccCcceeE
Q 023772 261 S-----VVAKFKAHSLVVK 274 (277)
Q Consensus 261 ~-----~~~~~~~h~~~v~ 274 (277)
+ ......+|...|.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~ 258 (753)
T 3jro_A 240 QGPWKKTLLKEEKFPDVLW 258 (753)
T ss_dssp SSCCBCCBSSSSCCSSCCC
T ss_pred CCcceeEEeccCCCCCceE
Confidence 4 3344445665554
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.7e-29 Score=214.69 Aligned_cols=247 Identities=13% Similarity=0.119 Sum_probs=198.5
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEE-----EEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIK-----TYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR 93 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~ 93 (277)
..+.+++|+|++.++++++.|+.|++||+.+++... .+.+|...|.+++|++++..+++++.|+.|++||+++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 345589999988888899999999999999988876 345788899999999999999999999999999999999
Q ss_pred eeEEeecccCceeEEEEecCCCEEE-EEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEee-------
Q 023772 94 VIRKFRGHESEVNAVKFNEYSSVVV-SAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGS------- 163 (277)
Q Consensus 94 ~~~~~~~h~~~v~~i~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~------- 163 (277)
.+..+..|...+.+++|+|+++.++ +++.|+.|++||+++.. ....+.. ...+..+.+++ ..+++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~--~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL--EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE--EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc--EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccc
Confidence 9999999999999999999999875 45589999999987543 2223322 33466666664 4577766
Q ss_pred -cCCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEE-EEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCC
Q 023772 164 -VDGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCI-LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSD 240 (277)
Q Consensus 164 -~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
.|+.|++||+++++.... .+...+.+++|+|+++++ ++++.|+.|++||+.+++.+..+... .....++++|++
T Consensus 280 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~---~~~~~~~~s~dg 356 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF---DKPNTIALSPDG 356 (433)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECS---SSEEEEEECTTS
T ss_pred cCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCC---CCCCeEEEcCCC
Confidence 488999999988765433 223478899999999765 56689999999999999888777532 224567789999
Q ss_pred ceEEeecC---------------CCeEEEEECcCccceeeeccCcc
Q 023772 241 AHVTGGSE---------------DGYIYFWDLVDASVVAKFKAHSL 271 (277)
Q Consensus 241 ~~l~sgs~---------------d~~i~iwd~~~~~~~~~~~~h~~ 271 (277)
+++++++. ||.|++||..+++.+..+..+..
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~ 402 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQ 402 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSS
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCC
Confidence 98887765 67999999999999988887643
No 123
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.8e-29 Score=214.81 Aligned_cols=207 Identities=21% Similarity=0.348 Sum_probs=175.6
Q ss_pred cccceeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCCee-------EEEEeccCccEEEEEEcC-CCCEEEEEe
Q 023772 9 TEANVLKGHEGAVLAARFNGDGN-YCLSCGKDRTIRLWNPHRGIH-------IKTYKSHGREVRDVHVTA-DNSKLISCG 79 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~~~-------~~~~~~h~~~v~~~~~~~-~~~~l~t~s 79 (277)
.....+.+|.++|.+++|+|++. +|++|+.||.|++||+.++.. ...+..|...|.+++|+| ++..|++++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 34566789999999999999998 999999999999999987321 466778999999999999 677899999
Q ss_pred CCCcEEEEECCCC---ceeEEeecccCceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEec
Q 023772 80 GDRQIFYWDVSTG---RVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT 155 (277)
Q Consensus 80 ~d~~v~~wd~~~~---~~~~~~~~h~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
.|+.|++||+.++ +.+..+..|...|++++|+|++. ++++|+.||+|++||++... .++..+..+...+.++.++
T Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~s 330 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWS 330 (430)
T ss_dssp TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECCSSCEEEEEEC
T ss_pred CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCCCCEEEEEEC
Confidence 9999999999987 57778889999999999999987 68999999999999998643 3455666788889999988
Q ss_pred CCe---EEEeecCCcEEEEEccCCc--------------ccc--cCCCCCeeEEEEeCCCC-EEEEEecCCeEEEEECCC
Q 023772 156 KTE---IIGGSVDGTVRTFDIRVGR--------------ELS--DDLGQPVNCISMSNDGN-CILASCLDSTLRLLDRST 215 (277)
Q Consensus 156 ~~~---~~~g~~d~~i~i~d~~~~~--------------~~~--~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~~wd~~~ 215 (277)
+.. +++++.|+.|++||+.... .+. ..+...|++++|+|++. +|++++.|+.|++|++..
T Consensus 331 p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 331 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 643 8899999999999998621 111 13456799999999999 899999999999999875
Q ss_pred C
Q 023772 216 G 216 (277)
Q Consensus 216 ~ 216 (277)
+
T Consensus 411 ~ 411 (430)
T 2xyi_A 411 N 411 (430)
T ss_dssp H
T ss_pred c
Confidence 4
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.1e-28 Score=205.29 Aligned_cols=235 Identities=12% Similarity=0.135 Sum_probs=189.4
Q ss_pred CEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCceeEEeecccCceeEEE
Q 023772 31 NYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK 109 (277)
Q Consensus 31 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~ 109 (277)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|+++++ ++++.|++|++||+++++++..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 467889999999999999999999998775 58999999999987 677799999999999999988887655 899999
Q ss_pred EecCCCEEE-EEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--eE-EEeecCCcEEEEEccCCccccc-CCC
Q 023772 110 FNEYSSVVV-SAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EI-IGGSVDGTVRTFDIRVGRELSD-DLG 184 (277)
Q Consensus 110 ~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~g~~d~~i~i~d~~~~~~~~~-~~~ 184 (277)
|+|+++.++ +++.|+.|++||+.+... ...+. ....+..+.++++ .+ ++++.++.|++||+.+++.... ...
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTV--AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeE--EEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC
Confidence 999999775 455679999999976532 22232 2345666777654 45 6788899999999988765433 234
Q ss_pred CCeeEEEEeCCCCEE-EEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeec---CCCeEEEEECcCc
Q 023772 185 QPVNCISMSNDGNCI-LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGS---EDGYIYFWDLVDA 260 (277)
Q Consensus 185 ~~v~~~~~s~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs---~d~~i~iwd~~~~ 260 (277)
..+.+++|+|+++++ ++++.|+.|++||+++++.+..+..+. ....++++|+++++++++ .|+.|++||+.++
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA---APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC---CccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 567999999999987 567789999999999998887776442 345567899999888877 6999999999999
Q ss_pred cceeeeccCccee
Q 023772 261 SVVAKFKAHSLVV 273 (277)
Q Consensus 261 ~~~~~~~~h~~~v 273 (277)
+.+..+..|..+.
T Consensus 235 ~~~~~~~~~~~~~ 247 (391)
T 1l0q_A 235 KITARIPVGPDPA 247 (391)
T ss_dssp EEEEEEECCSSEE
T ss_pred eEEEEEecCCCcc
Confidence 9999998876543
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.9e-28 Score=203.44 Aligned_cols=237 Identities=14% Similarity=0.132 Sum_probs=179.8
Q ss_pred cCCcEEEEEEeCCCCEE-EEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-ce
Q 023772 17 HEGAVLAARFNGDGNYC-LSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG-RV 94 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l-~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~-~~ 94 (277)
+...+..+.+.++++++ ++++.|++|++||..+++.+..+. |..+|.++.++++. ++.+ .|+.|++||+.++ +.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~ 132 (355)
T 3vu4_A 57 EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKR 132 (355)
T ss_dssp ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCB
T ss_pred ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCcee
Confidence 33457788899888877 568888999999999999998887 56799999998753 4443 4789999999988 77
Q ss_pred eEEeecccCceeEEEEecCCCEEEE--EeCCCcEEEEeCccCCC-------------cc-eEeeccccCcEEEEEecCC-
Q 023772 95 IRKFRGHESEVNAVKFNEYSSVVVS--AGYDQSLRAWDCRSHST-------------EP-IQIIDSFQDSVMSVCLTKT- 157 (277)
Q Consensus 95 ~~~~~~h~~~v~~i~~~~~~~~l~s--~~~d~~i~iwd~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~- 157 (277)
+.++.. +...+++++ ..++. |+.||.|++||++.... .+ ...+..|...+.++.++++
T Consensus 133 ~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g 207 (355)
T 3vu4_A 133 ITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS 207 (355)
T ss_dssp SSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS
T ss_pred eEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC
Confidence 666654 444455666 55555 58899999999976430 12 5567788899999988764
Q ss_pred -eEEEeecCCc-EEEEEccCCccccc---C-CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceE--EEEec-----
Q 023772 158 -EIIGGSVDGT-VRTFDIRVGRELSD---D-LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELL--QEYKG----- 224 (277)
Q Consensus 158 -~~~~g~~d~~-i~i~d~~~~~~~~~---~-~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~----- 224 (277)
.+++|+.|++ |++||+++++.+.. . +..+|++++|+|+|++|++++.|++|++||++.+... ..+.+
T Consensus 208 ~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 3vu4_A 208 DMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMK 287 (355)
T ss_dssp SEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECC
T ss_pred CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecc
Confidence 5999999998 99999998876543 2 6678999999999999999999999999999765321 11111
Q ss_pred -------------c-ccceeeeeeEecCCCceEEeecCCCeEEEEECcCccc
Q 023772 225 -------------H-ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 225 -------------~-~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~ 262 (277)
. ........+++++++.++++++.||.+++|++..++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 288 YFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp CCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred ccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 0 0000114467899999999999999999999887654
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.6e-26 Score=195.71 Aligned_cols=253 Identities=15% Similarity=0.074 Sum_probs=193.5
Q ss_pred eeeccCCcEEEEEEeC--------------CCCEEEEEeCC------CcEEEEcCCCCeeEEEEeccCccEEEEEEcCCC
Q 023772 13 VLKGHEGAVLAARFNG--------------DGNYCLSCGKD------RTIRLWNPHRGIHIKTYKSHGREVRDVHVTADN 72 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~--------------~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 72 (277)
.+.+|...+..+++++ .+..++.++.+ +.|++||... ...+.+..|...+.+++|+|++
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg 190 (415)
T 2hqs_A 112 SYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDG 190 (415)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTS
T ss_pred EEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCC
Confidence 3677777777766654 25677766654 7999999874 4567788899999999999999
Q ss_pred CEEEEEeCCC---cEEEEECCCCceeEEeecccCceeEEEEecCCCEEE-EEeCCCc--EEEEeCccCCCcceEeecccc
Q 023772 73 SKLISCGGDR---QIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVV-SAGYDQS--LRAWDCRSHSTEPIQIIDSFQ 146 (277)
Q Consensus 73 ~~l~t~s~d~---~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~-s~~~d~~--i~iwd~~~~~~~~~~~~~~~~ 146 (277)
++|++++.|+ .|++||++++++. .+..|...+.+++|+|+++.|+ +++.|+. |++||+.+.. ...+..+.
T Consensus 191 ~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~---~~~l~~~~ 266 (415)
T 2hqs_A 191 SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ---IRQVTDGR 266 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---EEECCCCS
T ss_pred CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC---EEeCcCCC
Confidence 9999999885 9999999998875 5677888999999999999777 6666665 9999987643 23444555
Q ss_pred CcEEEEEecCC--eEEEeec-CC--cEEEEEccCCcccc-cCCCCCeeEEEEeCCCCEEEEEecC---CeEEEEECCCCc
Q 023772 147 DSVMSVCLTKT--EIIGGSV-DG--TVRTFDIRVGRELS-DDLGQPVNCISMSNDGNCILASCLD---STLRLLDRSTGE 217 (277)
Q Consensus 147 ~~~~~~~~~~~--~~~~g~~-d~--~i~i~d~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~~wd~~~~~ 217 (277)
..+..+.++++ .++.++. ++ .|.+||+..++... ......+.+++|+|+|++|+.++.+ ..|++||+.+++
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 66777777654 4776665 45 57777887765322 2344578899999999999888765 589999999887
Q ss_pred eEEEEeccccceeeeeeEecCCCceEEeecCCC---eEEEEECcCccceeeeccCcceeEe
Q 023772 218 LLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDG---YIYFWDLVDASVVAKFKAHSLVVKL 275 (277)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~---~i~iwd~~~~~~~~~~~~h~~~v~~ 275 (277)
.. .+..+. ....++++|++++|+.++.|+ .|++||+. ++....+.+|...|+-
T Consensus 347 ~~-~l~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~ 402 (415)
T 2hqs_A 347 VQ-VLSSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKF 402 (415)
T ss_dssp EE-ECCCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEE
T ss_pred EE-EecCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcC
Confidence 64 444442 345578999999999888777 89999987 6677889999887764
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=5.6e-26 Score=183.37 Aligned_cols=244 Identities=15% Similarity=0.166 Sum_probs=152.7
Q ss_pred EEEEEEeCCC--C-EEEEEeCCCcEEEEcCCCC---eeEEEEeccCccEEEEEEcCCCCEEEEEeC-C---CcEEEEECC
Q 023772 21 VLAARFNGDG--N-YCLSCGKDRTIRLWNPHRG---IHIKTYKSHGREVRDVHVTADNSKLISCGG-D---RQIFYWDVS 90 (277)
Q Consensus 21 V~~~~~~~~~--~-~l~s~s~d~~v~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~-d---~~v~~wd~~ 90 (277)
|.++.|-..| + -++++++ .+|++|+..++ +.+.+.+.|..+|..+.+.|+...|+...- . +.|+..-..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 3445554333 2 4456666 79999999998 889999999888888888875433322110 0 011111000
Q ss_pred CC----ceeEEeecccCceeEEEEecCCCEEEEEe--CCCcEEEEeCcc-CCCcceEeeccccCcEEEEEe---cCCeEE
Q 023772 91 TG----RVIRKFRGHESEVNAVKFNEYSSVVVSAG--YDQSLRAWDCRS-HSTEPIQIIDSFQDSVMSVCL---TKTEII 160 (277)
Q Consensus 91 ~~----~~~~~~~~h~~~v~~i~~~~~~~~l~s~~--~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 160 (277)
.. .....-.+|...|.++ ++++++.+++ .|++|++|++.. ++.......+.....+.++++ ++..++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~La 197 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALL 197 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEE
T ss_pred CCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEE
Confidence 00 1111112344444443 4555555533 588888888743 222122223444445556665 446799
Q ss_pred EeecCCcEEEEEccCCcccccCC-----CCCeeEEEEeCCCCEE------------EEEecCCeEEEEECCCCceEEEEe
Q 023772 161 GGSVDGTVRTFDIRVGRELSDDL-----GQPVNCISMSNDGNCI------------LASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~~~~~~~~-----~~~v~~~~~s~~~~~l------------~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
+|+.|++|++||+.+++.+.... ...+.+++|+|+|.++ ++|+.|++|++||..+++.+..+.
T Consensus 198 SgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~ 277 (356)
T 2w18_A 198 GTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML 277 (356)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEE
T ss_pred EecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE
Confidence 99999999999999998655432 2357788999999876 567889999999999999887652
Q ss_pred -----ccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcce
Q 023772 224 -----GHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLV 272 (277)
Q Consensus 224 -----~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~ 272 (277)
+|... .... ..++.++++|+.|++|+|||+.+++++++|++|...
T Consensus 278 ~~~p~Gh~~~--~lsg--~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~ 327 (356)
T 2w18_A 278 YCLPPGQAGR--FLEG--DVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ 327 (356)
T ss_dssp ECCCTTCCCC--EEEE--EEETTEEEEEETTSCEEEEETTTCSEEEEECCC--C
T ss_pred eeccCCCcce--eEcc--ccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC
Confidence 44322 2222 223778999999999999999999999999998653
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=6.4e-25 Score=191.63 Aligned_cols=241 Identities=12% Similarity=0.108 Sum_probs=187.1
Q ss_pred EEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCceeEEeeccc
Q 023772 25 RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV--STGRVIRKFRGHE 102 (277)
Q Consensus 25 ~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~--~~~~~~~~~~~h~ 102 (277)
.|+|++.++++++.|++|++||..+++.+.++..+.. +..++|+|++++|++++.|++|++||+ .+++++.++.. .
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 3789999999999999999999999999999984433 899999999999999999999999999 88888888874 4
Q ss_pred CceeEEEEec----CCCEEEEEeC-CCcEEEEeCccCCCcceEeecc----------ccC-cEEEEEecC--C-eEEEee
Q 023772 103 SEVNAVKFNE----YSSVVVSAGY-DQSLRAWDCRSHSTEPIQIIDS----------FQD-SVMSVCLTK--T-EIIGGS 163 (277)
Q Consensus 103 ~~v~~i~~~~----~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~----------~~~-~~~~~~~~~--~-~~~~g~ 163 (277)
..+..++|+| +++++++++. +++|.+||..+... +..+.. +.. .+..+.+++ . .+++..
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP--KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE--EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc--ceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 5678999999 9999998885 89999999876432 333321 112 456666654 2 366777
Q ss_pred cCCcEEEEEccCCcccc---cCCCCCeeEEEEeCCCCEEEEEe-cCCeEEEEECCCCceEEEEec----cccceeeeeeE
Q 023772 164 VDGTVRTFDIRVGRELS---DDLGQPVNCISMSNDGNCILASC-LDSTLRLLDRSTGELLQEYKG----HICKSFKTDCC 235 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~----~~~~~~~~~~~ 235 (277)
.++.|.+||+...+.+. ...+..+..+.|+|+|+++++++ .+++|.+||..+++++..+.. |.... ...
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g--~~~- 376 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRG--ANF- 376 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTC--EEE-
T ss_pred CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCC--ccc-
Confidence 88999999997654322 12345678899999999876654 688999999999999888764 32211 222
Q ss_pred ecCC-CceEEeec-CCCeEEEEECcC-------ccceeeeccCcce
Q 023772 236 LTNS-DAHVTGGS-EDGYIYFWDLVD-------ASVVAKFKAHSLV 272 (277)
Q Consensus 236 ~~~~-~~~l~sgs-~d~~i~iwd~~~-------~~~~~~~~~h~~~ 272 (277)
++|+ +..+++++ .|++|.+||+.+ .++++++++|...
T Consensus 377 ~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~ 422 (543)
T 1nir_A 377 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG 422 (543)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC
T ss_pred CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC
Confidence 4566 56667765 689999999998 8999999988643
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=6.5e-24 Score=179.71 Aligned_cols=224 Identities=12% Similarity=0.066 Sum_probs=172.0
Q ss_pred cccceeeccCCcEEEEEEeCCCCEEEEEeCCC---cEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCc-
Q 023772 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDR---TIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQ- 83 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~---~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~- 83 (277)
.....+.+|.+.|.+++|+|+|++|++++.|+ .|++||+.+++.. .+..|...+.+++|+|++++|+ +++.|+.
T Consensus 169 ~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~ 247 (415)
T 2hqs_A 169 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSL 247 (415)
T ss_dssp CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCc
Confidence 34566788999999999999999999999885 9999999988765 5667888999999999999887 6666655
Q ss_pred -EEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeC-CC--cEEEEeCccCCCcceEeeccccCcEEEEEecC--C
Q 023772 84 -IFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY-DQ--SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--T 157 (277)
Q Consensus 84 -v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 157 (277)
|++||+.++++ ..+..|...+.++.|+|+++.|+.++. ++ .|.+||+..... ..+..+...+..+.+++ .
T Consensus 248 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 248 NLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP---QRITWEGSQNQDADVSSDGK 323 (415)
T ss_dssp EEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC---EECCCSSSEEEEEEECTTSS
T ss_pred eEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE---EEEecCCCcccCeEECCCCC
Confidence 99999998876 567778889999999999998888876 45 577778765432 22233344565666655 4
Q ss_pred eEEEeecC---CcEEEEEccCCcccccCCCCCeeEEEEeCCCCEEEEEecCC---eEEEEECCCCceEEEEeccccceee
Q 023772 158 EIIGGSVD---GTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDS---TLRLLDRSTGELLQEYKGHICKSFK 231 (277)
Q Consensus 158 ~~~~g~~d---~~i~i~d~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~~wd~~~~~~~~~~~~~~~~~~~ 231 (277)
.++.++.+ ..|.+||+.+++.........+.+++|+|+|++|+.++.|+ .|++||+. +...+.+.++.. ..
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~--~v 400 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDG--QV 400 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSS--EE
T ss_pred EEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCC--CC
Confidence 57766654 58999999877653322223789999999999999988877 79999997 455667777643 34
Q ss_pred eeeEecCCC
Q 023772 232 TDCCLTNSD 240 (277)
Q Consensus 232 ~~~~~~~~~ 240 (277)
..++++|..
T Consensus 401 ~~~~~~~~~ 409 (415)
T 2hqs_A 401 KFPAWSPYL 409 (415)
T ss_dssp EEEEECCCC
T ss_pred cCCcccccc
Confidence 567788754
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=1e-22 Score=168.07 Aligned_cols=248 Identities=11% Similarity=0.084 Sum_probs=188.1
Q ss_pred cCCcEEEEEEeCCCCEEEEEeC-------CCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEE
Q 023772 17 HEGAVLAARFNGDGNYCLSCGK-------DRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWD 88 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~s~s~-------d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd 88 (277)
....+..++|+|+|++++.++. ++.|.+||..+++.+..+... ..+..++|++++++++ +...++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 4466889999999999888774 568999999999888888653 4578899999999655 555679999999
Q ss_pred CCCCceeEEeecccCc---------eeEEEEecCCCEEEEEe--CCCcEEEEeCccCCCcceEeeccccC--cEEEEEec
Q 023772 89 VSTGRVIRKFRGHESE---------VNAVKFNEYSSVVVSAG--YDQSLRAWDCRSHSTEPIQIIDSFQD--SVMSVCLT 155 (277)
Q Consensus 89 ~~~~~~~~~~~~h~~~---------v~~i~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~ 155 (277)
.++++.+..+..+... +.++.++|+++.++.++ .++.|.+||+.+... ...+..... ....+..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL--KTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE--EEEECCCCTTCCCCEEETT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce--EEEecCCCCccceEEECCC
Confidence 9999988887765432 68899999999777765 478899999876432 222321222 22344445
Q ss_pred CCeEEEeecCCcEEEEEccCCcccccC------CCCCeeEEEEeCCCCEEEEEec-CCeEEEEECCCCceEEEEeccccc
Q 023772 156 KTEIIGGSVDGTVRTFDIRVGRELSDD------LGQPVNCISMSNDGNCILASCL-DSTLRLLDRSTGELLQEYKGHICK 228 (277)
Q Consensus 156 ~~~~~~g~~d~~i~i~d~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~ 228 (277)
+..++++..++.+.+||+.+++..... ....+..++|+|+|+++++++. ++.|++||..+++.+..+....
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-- 273 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-- 273 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--
Confidence 667888888999999999887654321 2345788999999998777665 4899999999999888776432
Q ss_pred eeeeeeEecCCCceEE-eecCCCeEEEEECcCccceeeeccCcc
Q 023772 229 SFKTDCCLTNSDAHVT-GGSEDGYIYFWDLVDASVVAKFKAHSL 271 (277)
Q Consensus 229 ~~~~~~~~~~~~~~l~-sgs~d~~i~iwd~~~~~~~~~~~~h~~ 271 (277)
...++++|++++++ +...++.|.+||..+++.+..+..+..
T Consensus 274 --~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 315 (353)
T 3vgz_A 274 --SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTH 315 (353)
T ss_dssp --CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSE
T ss_pred --CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCC
Confidence 23467899998554 555799999999999999888876543
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=2.1e-23 Score=171.29 Aligned_cols=249 Identities=8% Similarity=0.049 Sum_probs=172.7
Q ss_pred eccCCcEEEEEEeCCCCEEEEEeCC-CcEEEEcCC--CCe--eEEEEeccCccEEEEEEcCCCCEEEEEeC-CCcEEEEE
Q 023772 15 KGHEGAVLAARFNGDGNYCLSCGKD-RTIRLWNPH--RGI--HIKTYKSHGREVRDVHVTADNSKLISCGG-DRQIFYWD 88 (277)
Q Consensus 15 ~~H~~~V~~~~~~~~~~~l~s~s~d-~~v~iwd~~--~~~--~~~~~~~h~~~v~~~~~~~~~~~l~t~s~-d~~v~~wd 88 (277)
..|...+.+++|+|+|++|++++.+ +.+++|++. +++ .+..+..+. .+..++|+|++++|++++. ++.|.+||
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 3577889999999999999988887 999999987 554 344555444 8899999999998876664 88999999
Q ss_pred CC---CCceeEEeecccCceeEEEEecCCCEEEEEe-CCCcEEEEeCcc-CCCcceE--eec-cccCcEEEEEecC--Ce
Q 023772 89 VS---TGRVIRKFRGHESEVNAVKFNEYSSVVVSAG-YDQSLRAWDCRS-HSTEPIQ--IID-SFQDSVMSVCLTK--TE 158 (277)
Q Consensus 89 ~~---~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~-~d~~i~iwd~~~-~~~~~~~--~~~-~~~~~~~~~~~~~--~~ 158 (277)
+. ..+.+..+..+ ..+.++.|+|+++.+++++ .|+.|.+||+.. ....... ... .....+..+.+++ ..
T Consensus 113 ~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp EETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE
Confidence 94 44455555443 4578899999999888777 899999999875 3222111 111 1223455566654 44
Q ss_pred EE-EeecCCcEEEEEccC--Ccc-----ccc---CC--CCCeeEEEEeCCCCEEEEE-ecCCeEEEEECC--C--CceEE
Q 023772 159 II-GGSVDGTVRTFDIRV--GRE-----LSD---DL--GQPVNCISMSNDGNCILAS-CLDSTLRLLDRS--T--GELLQ 220 (277)
Q Consensus 159 ~~-~g~~d~~i~i~d~~~--~~~-----~~~---~~--~~~v~~~~~s~~~~~l~~~-~~d~~i~~wd~~--~--~~~~~ 220 (277)
++ ++..++.+.+||+.. ++. +.. .. ...+..++|+|+|++|+++ ..++.|++||+. + .+.+.
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 54 445789999999953 221 111 11 1246689999999988754 478999999997 3 33444
Q ss_pred EEeccccceeeeeeEecCCCceEEeec-CCCeEEEEEC--cCcc--ceeeecc
Q 023772 221 EYKGHICKSFKTDCCLTNSDAHVTGGS-EDGYIYFWDL--VDAS--VVAKFKA 268 (277)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sgs-~d~~i~iwd~--~~~~--~~~~~~~ 268 (277)
.+..+. ....++++|+++++++++ .|+.|++|++ .+++ .+..++.
T Consensus 272 ~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 272 FQPTET---QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp EEECSS---SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC
T ss_pred eecCCC---ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc
Confidence 444332 145678899999877766 6899999954 4553 3455554
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=2.1e-23 Score=182.08 Aligned_cols=241 Identities=14% Similarity=0.096 Sum_probs=181.6
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEcC--CCCeeEEEEeccCccEEEEEEcC----CCCEEEEEe-CCCcEEEEECCCCc
Q 023772 21 VLAARFNGDGNYCLSCGKDRTIRLWNP--HRGIHIKTYKSHGREVRDVHVTA----DNSKLISCG-GDRQIFYWDVSTGR 93 (277)
Q Consensus 21 V~~~~~~~~~~~l~s~s~d~~v~iwd~--~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~t~s-~d~~v~~wd~~~~~ 93 (277)
+..++|+|+|++|++++.|++|++||+ .+++.+.++.. ...+..++|+| +++++++++ .+++|.+||..+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 889999999999999999999999999 88888888874 55789999999 999999887 48999999999999
Q ss_pred eeEEeec----------ccC-ceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEec--CCeE
Q 023772 94 VIRKFRG----------HES-EVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEI 159 (277)
Q Consensus 94 ~~~~~~~----------h~~-~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 159 (277)
++.++.. |.. .+.++.+++++. ++++...+++|.+||...........+. .......+.++ +..+
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEE
Confidence 8887764 323 788999999765 5667778999999998764332222222 22233344444 4555
Q ss_pred EE-eecCCcEEEEEccCCcccccC------CCCCeeEEEEeCC-CCEEEEEe-cCCeEEEEECCC-------CceEEEEe
Q 023772 160 IG-GSVDGTVRTFDIRVGRELSDD------LGQPVNCISMSND-GNCILASC-LDSTLRLLDRST-------GELLQEYK 223 (277)
Q Consensus 160 ~~-g~~d~~i~i~d~~~~~~~~~~------~~~~v~~~~~s~~-~~~l~~~~-~d~~i~~wd~~~-------~~~~~~~~ 223 (277)
++ +..+++|.+||..+++..... +......+ ++|+ +..+++++ .|++|.+||..+ .++++++.
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred EEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE
Confidence 54 456899999999988654321 11112222 4777 55566665 689999999988 88999998
Q ss_pred ccccceeeeeeEecCCCceEEeec-------CCCeEEEEECcCccce-eee
Q 023772 224 GHICKSFKTDCCLTNSDAHVTGGS-------EDGYIYFWDLVDASVV-AKF 266 (277)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~l~sgs-------~d~~i~iwd~~~~~~~-~~~ 266 (277)
+|... .....++|++++|++++ .+++|.+||+.+++.. +.+
T Consensus 418 ~~g~~--~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~ 466 (543)
T 1nir_A 418 GQGGG--SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVL 466 (543)
T ss_dssp CSCSC--CCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEE
T ss_pred cCCCC--ceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEe
Confidence 87533 34456899999999987 2779999999999887 443
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=2.8e-24 Score=194.51 Aligned_cols=250 Identities=10% Similarity=0.071 Sum_probs=186.8
Q ss_pred CCcEEEEEEeCCCCEEEEEeC-CC-----cEEEEcCCCCeeEEEEeccCc------------------------cEEEEE
Q 023772 18 EGAVLAARFNGDGNYCLSCGK-DR-----TIRLWNPHRGIHIKTYKSHGR------------------------EVRDVH 67 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~-d~-----~v~iwd~~~~~~~~~~~~h~~------------------------~v~~~~ 67 (277)
...|.+++|+|||++|++++. |+ .|++||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 999999999987777765433 388999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCCc--eeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccc
Q 023772 68 VTADNSKLISCGGDRQIFYWDVSTGR--VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSF 145 (277)
Q Consensus 68 ~~~~~~~l~t~s~d~~v~~wd~~~~~--~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 145 (277)
|+|++++|++++. +.|++||+.++. ....+..|...+..+.|+|+++.|+.++ ++.|++||+..... .......
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~--~~~~~~~ 191 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ--MQLTADG 191 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE--EECCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE--EEeccCC
Confidence 9999999999886 899999999883 3455777888999999999999999887 56899999876432 1221111
Q ss_pred cC------------------cEEEEEecCCeEEEeecCC---------------------------------cEEEEEcc
Q 023772 146 QD------------------SVMSVCLTKTEIIGGSVDG---------------------------------TVRTFDIR 174 (277)
Q Consensus 146 ~~------------------~~~~~~~~~~~~~~g~~d~---------------------------------~i~i~d~~ 174 (277)
.. ....+.++++.++.++.|+ .|.+||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 11 1233444455688777665 78889988
Q ss_pred C-CcccccC----CCCCeeEEEEeCCCCEEEEEec-----CCeEEEEECCCCceEEEEeccccce--eeeeeEecCCCce
Q 023772 175 V-GRELSDD----LGQPVNCISMSNDGNCILASCL-----DSTLRLLDRSTGELLQEYKGHICKS--FKTDCCLTNSDAH 242 (277)
Q Consensus 175 ~-~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~-----d~~i~~wd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 242 (277)
+ ++..... +...+..++| |+|++|+.++. +..|++||+.+++....+..+...- ......++|+|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~ 350 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSI 350 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCE
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeE
Confidence 7 6543222 3356889999 99999987764 5689999999998877665543110 1235678999999
Q ss_pred EEeecCCCeEEEEECc-CccceeeeccCccee
Q 023772 243 VTGGSEDGYIYFWDLV-DASVVAKFKAHSLVV 273 (277)
Q Consensus 243 l~sgs~d~~i~iwd~~-~~~~~~~~~~h~~~v 273 (277)
+++++.||.+++|.++ ++. ...+..|...|
T Consensus 351 ~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v 381 (741)
T 2ecf_A 351 LWSSERTGFQHLYRIDSKGK-AAALTHGNWSV 381 (741)
T ss_dssp EEEECTTSSCEEEEECSSSC-EEESCCSSSCE
T ss_pred EEEecCCCccEEEEEcCCCC-eeeeeecceEE
Confidence 9999999988888765 455 77777776544
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=7.1e-23 Score=167.76 Aligned_cols=247 Identities=9% Similarity=0.121 Sum_probs=174.9
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEEeC-CCcEEEEcCCCCee-EEEEeccCccEEEEEEcCCCCEEEEEeCCC---cEEEE
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSCGK-DRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADNSKLISCGGDR---QIFYW 87 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~s~-d~~v~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~---~v~~w 87 (277)
.+..+..++ .++|+|+|++++.++. ++.|.+||..+++. ...+..+..+..+++|+|++++++++..++ .|.+|
T Consensus 35 ~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 35 QITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp EEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEE
T ss_pred eEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEE
Confidence 334556666 9999999997776655 89999999999887 777777777766699999999999555553 89999
Q ss_pred ECCCCceeEEeecccCceeEEEEecCCCEEE-EEeCCCc-EEEEeCccCCCcc---eEeeccccCcEEEEEecC--CeE-
Q 023772 88 DVSTGRVIRKFRGHESEVNAVKFNEYSSVVV-SAGYDQS-LRAWDCRSHSTEP---IQIIDSFQDSVMSVCLTK--TEI- 159 (277)
Q Consensus 88 d~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~-s~~~d~~-i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~- 159 (277)
|+++++.+..+..+ ....++.|+|+++.++ +...++. +.+|++....... .... ........+.+++ +.+
T Consensus 114 d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~ 191 (331)
T 3u4y_A 114 SFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAF 191 (331)
T ss_dssp ETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEE
T ss_pred ECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEE
Confidence 99999988877654 4458899999998554 4456688 9999986432110 1111 1223345566654 434
Q ss_pred EEeecCCcEEEEEccCCcc---ccc-CCCCCeeEEEEeCCCCEEEEEe-cCCeEEEEECCCCce--EEEEecc----ccc
Q 023772 160 IGGSVDGTVRTFDIRVGRE---LSD-DLGQPVNCISMSNDGNCILASC-LDSTLRLLDRSTGEL--LQEYKGH----ICK 228 (277)
Q Consensus 160 ~~g~~d~~i~i~d~~~~~~---~~~-~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~wd~~~~~~--~~~~~~~----~~~ 228 (277)
+++..++.|.+||+.+++. +.. .....+..++|+|+|++++++. .++.|.+||..+++. +..+..+ ...
T Consensus 192 v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 271 (331)
T 3u4y_A 192 VANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRP 271 (331)
T ss_dssp EEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGG
T ss_pred EEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCC
Confidence 4555689999999987765 332 2345678899999999776654 578899999998877 4444332 111
Q ss_pred ee-eeeeEecCCCceEE-eecCCCeEEEEECcCccc
Q 023772 229 SF-KTDCCLTNSDAHVT-GGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 229 ~~-~~~~~~~~~~~~l~-sgs~d~~i~iwd~~~~~~ 262 (277)
.. ....+++|++++++ ++..++.|++||+.+...
T Consensus 272 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 272 LFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp GTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred cccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 10 12247899999875 455677999999987543
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=7.3e-24 Score=173.61 Aligned_cols=240 Identities=9% Similarity=0.055 Sum_probs=177.9
Q ss_pred cEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCeeEEEEecc-----CccEEEEEEcCCCCEEEEEe------------CC
Q 023772 20 AVLAARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSH-----GREVRDVHVTADNSKLISCG------------GD 81 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~t~s------------~d 81 (277)
.+..++|+|+|++++ +++.++.|.+||+.+++.+..+... ...+..++|+|+++++++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 478899999998664 6667899999999999887776532 22677899999999998886 57
Q ss_pred CcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeecccc--CcEEEEEecCCeE
Q 023772 82 RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQ--DSVMSVCLTKTEI 159 (277)
Q Consensus 82 ~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 159 (277)
+.|.+||+++++.+..+.. ...+..+.|+|+++.++.+ ++.|.+||+.+... ...+.... ... .+.+++..+
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~--~~~~~~~~~~~~~-~~s~dg~~l 188 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTL--VEDKPIQSWEAET-YAQPDVLAV 188 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEE--EEEECSTTTTTTT-BCCCBCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcE--eeeeeccccCCCc-eeCCCccEE
Confidence 9999999999988877764 4567789999999988877 68999999876432 22221111 111 222333333
Q ss_pred EEee-cCC-----------------------cEEEEEccCCcccc---cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEE
Q 023772 160 IGGS-VDG-----------------------TVRTFDIRVGRELS---DDLGQPVNCISMSNDGNCILASCLDSTLRLLD 212 (277)
Q Consensus 160 ~~g~-~d~-----------------------~i~i~d~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd 212 (277)
+..+ .++ .|.+||+.+++... ......+.+++|+|+|++++++ ++.|++||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d 266 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFD 266 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEE
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEE
Confidence 2222 122 47889998775431 1223467889999999998887 78999999
Q ss_pred CCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCc
Q 023772 213 RSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270 (277)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~ 270 (277)
+.+++.+..+.... ....++++|+++++++++.|+.|++||+.+++.+..++.+.
T Consensus 267 ~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 267 LEKNASIKRVPLPH---SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp TTTTEEEEEEECSS---CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred CCCCcCcceecCCC---ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 99998887776432 23456789999998888899999999999999999988653
No 136
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=1.7e-23 Score=172.36 Aligned_cols=239 Identities=9% Similarity=0.019 Sum_probs=176.6
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccC-ccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCceeEEeec
Q 023772 23 AARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHG-REVRDVHVTADNSKLI-SCGGDRQIFYWDVSTGRVIRKFRG 100 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~~~~~~~~~ 100 (277)
.+++++++.++++++.+++|++||..+++.+..+..+. ..+..++|+|++++++ ++..++.|.+||+++++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 35677888999999999999999999999888887543 2578999999998665 556789999999999988777653
Q ss_pred cc------CceeEEEEecCCCEEEEEeCC------------CcEEEEeCccCCCcc-eEeeccccCcEEEEEecCCe-EE
Q 023772 101 HE------SEVNAVKFNEYSSVVVSAGYD------------QSLRAWDCRSHSTEP-IQIIDSFQDSVMSVCLTKTE-II 160 (277)
Q Consensus 101 h~------~~v~~i~~~~~~~~l~s~~~d------------~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~ 160 (277)
+. ..+..+.++|+++++++++.+ +.|.+||+.+..... ..... ....+..+.++++. ++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~ 162 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLY 162 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEE
Confidence 32 237789999999999998866 999999987633211 12222 22234444444322 55
Q ss_pred EeecCCcEEEEEccCCccccc---CC------------------------------------------------------
Q 023772 161 GGSVDGTVRTFDIRVGRELSD---DL------------------------------------------------------ 183 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~~~~~~~---~~------------------------------------------------------ 183 (277)
+++ +.|.+||+.+++.... ..
T Consensus 163 ~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 240 (349)
T 1jmx_B 163 VAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 240 (349)
T ss_dssp EES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred Ecc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence 543 4499999877653211 10
Q ss_pred -------------CCCeeEEEEeC-CCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCC
Q 023772 184 -------------GQPVNCISMSN-DGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249 (277)
Q Consensus 184 -------------~~~v~~~~~s~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d 249 (277)
+..+..++|+| ++++++++ ++.|++||+.+++.+..+.... ....+++++++++|++++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~ 315 (349)
T 1jmx_B 241 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGGTF 315 (349)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS---CCCEEEECSSSSCEEEESBS
T ss_pred cCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC---CccceEECCCCCEEEEecCC
Confidence 01345677889 99988887 8899999999998887775432 13456789999988888889
Q ss_pred CeEEEEECcCccceeeeccC
Q 023772 250 GYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 250 ~~i~iwd~~~~~~~~~~~~h 269 (277)
+.|++||..+++.++.++.+
T Consensus 316 ~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 316 NDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SEEEEEETTTTEEEEEEECS
T ss_pred CeEEEEeccccceeeeeecC
Confidence 99999999999999888755
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=2.5e-23 Score=167.00 Aligned_cols=233 Identities=10% Similarity=-0.001 Sum_probs=168.6
Q ss_pred EEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeEEeecc-cCceeEEEEec
Q 023772 35 SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST-GRVIRKFRGH-ESEVNAVKFNE 112 (277)
Q Consensus 35 s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~-~~~~~~~~~h-~~~v~~i~~~~ 112 (277)
+++.|++|++||+.+++.. .+..|...+.+++|+|++++|++++ ++.|++||+++ ++.......+ ...+.++.|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 4578999999999988765 4556888999999999999999887 78999999999 8877666665 46788999999
Q ss_pred CCCEEEEEe--CCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEE-EeecCCcEEEEEccC--Cccc-ccCCC
Q 023772 113 YSSVVVSAG--YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEII-GGSVDGTVRTFDIRV--GREL-SDDLG 184 (277)
Q Consensus 113 ~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~g~~d~~i~i~d~~~--~~~~-~~~~~ 184 (277)
+++.+++++ .++..++|......... ..+... ..+..+.+++ ..++ ++..++.+++|++.. ++.. .....
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCce-EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 999999998 44566666654322222 222222 2355556654 4455 778899999998643 2221 12344
Q ss_pred CCeeEEEEeCCCCEEEEEe-cCCeEEEEECC-CCceEEEEeccccceeeeeeEecCCCceEEeecCC-----------Ce
Q 023772 185 QPVNCISMSNDGNCILASC-LDSTLRLLDRS-TGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED-----------GY 251 (277)
Q Consensus 185 ~~v~~~~~s~~~~~l~~~~-~d~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d-----------~~ 251 (277)
..+.+++|+|+|++|+.++ .++.+++|++. .+..+..+..+. .....+.++|++++|+.++.+ +.
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA--YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS--EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC--cccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 6789999999999888766 58899999885 455566666553 334556789999998887765 57
Q ss_pred EEEEECcCccce--eeeccCccee
Q 023772 252 IYFWDLVDASVV--AKFKAHSLVV 273 (277)
Q Consensus 252 i~iwd~~~~~~~--~~~~~h~~~v 273 (277)
|++||+.+++.. ..+.+|...+
T Consensus 251 l~~~d~~~~~~~~~~~~~~~~~~~ 274 (297)
T 2ojh_A 251 VQLMDMDGGNVETLFDLFGGQGTM 274 (297)
T ss_dssp EEEEETTSCSCEEEEEEEESTTTS
T ss_pred EEEEecCCCCceeeeccCCCCccc
Confidence 999999988764 3444665444
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=2e-23 Score=167.57 Aligned_cols=236 Identities=11% Similarity=0.004 Sum_probs=170.2
Q ss_pred cccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCC-CeeEEEEecc-CccEEEEEEcCCCCEEEEEe--CCCcE
Q 023772 9 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR-GIHIKTYKSH-GREVRDVHVTADNSKLISCG--GDRQI 84 (277)
Q Consensus 9 ~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h-~~~v~~~~~~~~~~~l~t~s--~d~~v 84 (277)
.+...+..|.+.|.+++|+|+|++|++++ ++.|++||+.+ ++.......| ...+.+++|+|++++|++++ .++..
T Consensus 32 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 32 RKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp TEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred CceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcc
Confidence 33445678999999999999999999977 78999999998 8777666665 36789999999999999998 33455
Q ss_pred EEEE--CCCCceeEEeecccCceeEEEEecCCCEEE-EEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--eE
Q 023772 85 FYWD--VSTGRVIRKFRGHESEVNAVKFNEYSSVVV-SAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EI 159 (277)
Q Consensus 85 ~~wd--~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 159 (277)
++|. +.+++ ...+..+ ..+..+.|+|+++.++ +++.|+.+++|++..... ....+..+...+..+.++++ .+
T Consensus 111 ~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 111 AIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG-VETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp EEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-CEEECCCSSSCEEEEEECTTSSEE
T ss_pred eEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC-cceEcccCCCccccceECCCCCEE
Confidence 5554 45544 3444433 3488899999999877 788899999999754322 23334445566777777654 46
Q ss_pred EEee-cCCcEEEEEcc-CCccccc--CCCCCeeEEEEeCCCCEEEEEecC-----------CeEEEEECCCCceEE--EE
Q 023772 160 IGGS-VDGTVRTFDIR-VGRELSD--DLGQPVNCISMSNDGNCILASCLD-----------STLRLLDRSTGELLQ--EY 222 (277)
Q Consensus 160 ~~g~-~d~~i~i~d~~-~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d-----------~~i~~wd~~~~~~~~--~~ 222 (277)
+.++ .++.+++|++. .+..... .....+.+++|+|+|++|++++.+ +.|++||+.+++... .+
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 267 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDL 267 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEE
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeecc
Confidence 6554 58999999986 3332222 233568889999999999888766 569999998876543 33
Q ss_pred eccccceeeeeeEecCCCceEEeecCCC
Q 023772 223 KGHICKSFKTDCCLTNSDAHVTGGSEDG 250 (277)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~sgs~d~ 250 (277)
.+|.. ....++++|++++|++++.|.
T Consensus 268 ~~~~~--~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 268 FGGQG--TMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EESTT--TSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCc--ccccceECCCCCEEEEEEecc
Confidence 34432 234467899999888776553
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=4.2e-22 Score=164.43 Aligned_cols=246 Identities=12% Similarity=0.135 Sum_probs=166.9
Q ss_pred eccCCcEEEEEEeCCCCEEEEEeC---CCcEEEEcCCCCe--eEEEEeccCccEEEEEEcCCCCEEEEEe-CCCcEEEEE
Q 023772 15 KGHEGAVLAARFNGDGNYCLSCGK---DRTIRLWNPHRGI--HIKTYKSHGREVRDVHVTADNSKLISCG-GDRQIFYWD 88 (277)
Q Consensus 15 ~~H~~~V~~~~~~~~~~~l~s~s~---d~~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~t~s-~d~~v~~wd 88 (277)
..+...+..++|+|+|+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|++++|++++ .++.+.+|+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 34566778899999999 565544 6999999997765 3445556778899999999999988887 689999999
Q ss_pred CCC-Cc--eeEEeec---------ccCceeEEEEecCCCEEEEEeCCCcEEEEeCcc-CCCcceEeecc-ccCcEEEEEe
Q 023772 89 VST-GR--VIRKFRG---------HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS-HSTEPIQIIDS-FQDSVMSVCL 154 (277)
Q Consensus 89 ~~~-~~--~~~~~~~---------h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~-~~~~~~~~~~ 154 (277)
+.. +. .+..+.. +...+.+++++|+++++++...++.|.+|++.. ........... .......+.+
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 963 32 2333321 123478899999999777777789999999872 22211111111 1223444555
Q ss_pred cC--CeEE-EeecCCcEEEEEccC--Ccc-----cccCC-----CCCeeEEEEeCCCCEE-EEEecCCeEEEEECCCC--
Q 023772 155 TK--TEII-GGSVDGTVRTFDIRV--GRE-----LSDDL-----GQPVNCISMSNDGNCI-LASCLDSTLRLLDRSTG-- 216 (277)
Q Consensus 155 ~~--~~~~-~g~~d~~i~i~d~~~--~~~-----~~~~~-----~~~v~~~~~s~~~~~l-~~~~~d~~i~~wd~~~~-- 216 (277)
++ +.++ +...++.+.+|++.. ++. +.... ...+..++|+|+|++| ++...++.|++||+...
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH 274 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc
Confidence 54 4444 456788999999874 321 11111 1347889999999987 45566899999999732
Q ss_pred -ceEEEEeccccceeeeeeEecCCCceEEeec-CCCeEEEE--ECcCccce
Q 023772 217 -ELLQEYKGHICKSFKTDCCLTNSDAHVTGGS-EDGYIYFW--DLVDASVV 263 (277)
Q Consensus 217 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-~d~~i~iw--d~~~~~~~ 263 (277)
+.+..+..+. .....++++|++++|++++ .++.|.+| |..++++.
T Consensus 275 ~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 275 LTLIQQISTEG--DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEEEEECSS--SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEeEEEecCC--CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 3444444332 2245677899999887765 45899999 55667665
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=7e-22 Score=161.82 Aligned_cols=232 Identities=13% Similarity=0.168 Sum_probs=169.9
Q ss_pred EEEeCCCCE-EEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeC-CCcEEEEECCCCce-eEEeec
Q 023772 24 ARFNGDGNY-CLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGG-DRQIFYWDVSTGRV-IRKFRG 100 (277)
Q Consensus 24 ~~~~~~~~~-l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~-d~~v~~wd~~~~~~-~~~~~~ 100 (277)
..|.+++.+ +++++.++.|++||..+++....+..+...+ .++|+|+++++++++. ++.|.+||+++++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 345665554 6688999999999999999888888776777 9999999997766655 89999999999987 777777
Q ss_pred ccCceeEEEEecCCCEEEEEeCCC---cEEEEeCccCCCcceEeeccccCcEEEEEecCC--eEE-EeecCCc-EEEEEc
Q 023772 101 HESEVNAVKFNEYSSVVVSAGYDQ---SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EII-GGSVDGT-VRTFDI 173 (277)
Q Consensus 101 h~~~v~~i~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~g~~d~~-i~i~d~ 173 (277)
+..+..+++++|++++++++..++ .|.+||+..... ...+.. ......+.++++ .++ +...++. +.+|++
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~--~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF--ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE--EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe--EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 777776699999999998555553 899999876432 222222 233456666654 454 4455688 999998
Q ss_pred cCCccc------ccCCCCCeeEEEEeCCCCEEEEE-ecCCeEEEEECCCCce---EEEEeccccceeeeeeEecCCCceE
Q 023772 174 RVGREL------SDDLGQPVNCISMSNDGNCILAS-CLDSTLRLLDRSTGEL---LQEYKGHICKSFKTDCCLTNSDAHV 243 (277)
Q Consensus 174 ~~~~~~------~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l 243 (277)
.....+ .......+..++|+|+|++++.+ ..++.|++||+.+++. +..+... .....++++|+++++
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIVVSRDGSTV 235 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEEECTTSSEE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEEECCCCCEE
Confidence 643221 11234568899999999966554 4688999999999887 6666643 233556789999976
Q ss_pred Ee-ecCCCeEEEEECcCccc
Q 023772 244 TG-GSEDGYIYFWDLVDASV 262 (277)
Q Consensus 244 ~s-gs~d~~i~iwd~~~~~~ 262 (277)
+. ...++.|.+||..++++
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EEECSSEEEEEEEETTTTEE
T ss_pred EEEEcCCCEEEEEECCCCce
Confidence 54 44688899999999887
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=3.3e-23 Score=186.91 Aligned_cols=245 Identities=8% Similarity=0.069 Sum_probs=173.5
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCc---cEEEEEEcCCCCEEEEEeCC---------CcEEE
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR---EVRDVHVTADNSKLISCGGD---------RQIFY 86 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~t~s~d---------~~v~~ 86 (277)
..+.+++|+|||+++++ +.|++|++||+.+++....+..|.. .|.+++|+|++++|++++.+ +.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 34678999999998776 7899999999999988888877765 49999999999999999875 77889
Q ss_pred EECCCCceeEEee---cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCc---------------
Q 023772 87 WDVSTGRVIRKFR---GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDS--------------- 148 (277)
Q Consensus 87 wd~~~~~~~~~~~---~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--------------- 148 (277)
||+++++. ..+. .|...+..++|+|+++.|+.++. +.|++||+..... ..........
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~--~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA--IRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC--EEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce--EEEecCCCCCceECcccceeEEEEe
Confidence 99998876 3333 44555888999999999999876 7899999876533 2222221111
Q ss_pred ---EEEEEec--CCeEEEeecCC----------------------------------cEEEEEccCCccccc--CC----
Q 023772 149 ---VMSVCLT--KTEIIGGSVDG----------------------------------TVRTFDIRVGRELSD--DL---- 183 (277)
Q Consensus 149 ---~~~~~~~--~~~~~~g~~d~----------------------------------~i~i~d~~~~~~~~~--~~---- 183 (277)
+..+.++ ++.++.++.|+ .|++||+.+++.... ..
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 1345554 45677766543 789999987753211 11
Q ss_pred --CCCeeEEEEeCCCCEEEEEec----CCeEEEEECCCCceEEEEeccc-ccee--eeeeEecCCCceEEe--ecCCC--
Q 023772 184 --GQPVNCISMSNDGNCILASCL----DSTLRLLDRSTGELLQEYKGHI-CKSF--KTDCCLTNSDAHVTG--GSEDG-- 250 (277)
Q Consensus 184 --~~~v~~~~~s~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~s--gs~d~-- 250 (277)
...+..++|+|||++|++.+. +..|++||+.++++...+..+. .... .....++|+|+.++. +..|+
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 346788999999998877653 3579999999988776554331 1111 125678999997764 45677
Q ss_pred ----eEEEEE-CcCcc--ceeeecc
Q 023772 251 ----YIYFWD-LVDAS--VVAKFKA 268 (277)
Q Consensus 251 ----~i~iwd-~~~~~--~~~~~~~ 268 (277)
.|++|| ...++ +...+..
T Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~l~~ 356 (723)
T 1xfd_A 332 GKFYHITVSSSQPNSSNDNIQSITS 356 (723)
T ss_dssp SCEEEEEEECSSCCSSSCCCCBSCC
T ss_pred cceeEEEEEeccCCCCccceeEeec
Confidence 577777 34444 1555553
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=4.1e-21 Score=158.41 Aligned_cols=228 Identities=9% Similarity=0.083 Sum_probs=169.2
Q ss_pred CcEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCeeEEEEeccCcc---------EEEEEEcCCCCEEEEEe--CCCcEEE
Q 023772 19 GAVLAARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGRE---------VRDVHVTADNSKLISCG--GDRQIFY 86 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~l~t~s--~d~~v~~ 86 (277)
..+..+.|+++|++++ +...++.|.+||..+++.+..+..+... +.++.|+|++++++.++ .++.|.+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV 168 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEE
Confidence 4467899999999555 5566899999999999988888765432 78999999999877765 4789999
Q ss_pred EECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeec--cccCcEEEEEec--CCeEEEe
Q 023772 87 WDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIID--SFQDSVMSVCLT--KTEIIGG 162 (277)
Q Consensus 87 wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~g 162 (277)
||+++++.+..+..+...+..+.++|+++.++.++.++.+.+||+.+.......... ........+.++ +..++.+
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp EETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred EcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 999999998888766667888999999999999999999999998765332221111 122334445554 5555555
Q ss_pred e-cCCcEEEEEccCCcccccCCCCCeeEEEEeCCCCEEEEEe-cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCC
Q 023772 163 S-VDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASC-LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSD 240 (277)
Q Consensus 163 ~-~d~~i~i~d~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
. .++.|.+||+.+++.+..........++|+|+|++++++. .++.|.+||..+++.+..+.... ....++++|++
T Consensus 249 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg 325 (353)
T 3vgz_A 249 DSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT---HPNSLALSADG 325 (353)
T ss_dssp ESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS---EEEEEEECTTS
T ss_pred eCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC---CCCeEEEcCCC
Confidence 4 4589999999887654332222235699999999766555 68999999999999888776542 34556789999
Q ss_pred ceEEeecCC
Q 023772 241 AHVTGGSED 249 (277)
Q Consensus 241 ~~l~sgs~d 249 (277)
++++.+..+
T Consensus 326 ~~l~v~~~~ 334 (353)
T 3vgz_A 326 KTLYVSVKQ 334 (353)
T ss_dssp CEEEEEEEC
T ss_pred CEEEEEEcc
Confidence 876665544
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=8.9e-22 Score=173.53 Aligned_cols=237 Identities=11% Similarity=0.036 Sum_probs=166.0
Q ss_pred cCCcEEEEEEeCCCCEEEEEeC-CCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeC---CCcEEEEECCC-
Q 023772 17 HEGAVLAARFNGDGNYCLSCGK-DRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGG---DRQIFYWDVST- 91 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~---d~~v~~wd~~~- 91 (277)
+..+|.+++|+|||++|++++. |++++||++..++..+....+...+.++.|+|+ +.+++++. +...++|.+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 4678999999999999999887 999999998766654444333368999999999 77777765 45556655432
Q ss_pred --CceeEEeecccCceeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecC---
Q 023772 92 --GRVIRKFRGHESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD--- 165 (277)
Q Consensus 92 --~~~~~~~~~h~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d--- 165 (277)
+... .+.... .+...+|+|+++ .+++.+.++.+.+||+.+..... ... .......++++++.++.++.+
T Consensus 99 ~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~--l~~-~~~~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 99 RPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE--LAR-LPGFGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp STTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE--EEE-ESSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE--eec-CCCceEEECCCCCEEEEEEEcCCC
Confidence 2222 333222 334567888775 33344445556699987653322 222 222445566778888877766
Q ss_pred -CcEEEEEccCCcccc-cCCCCCeeEEEEeCCCCEEEEEecCC--eEEEEECCCCceEEEEeccccceeeeeeE------
Q 023772 166 -GTVRTFDIRVGRELS-DDLGQPVNCISMSNDGNCILASCLDS--TLRLLDRSTGELLQEYKGHICKSFKTDCC------ 235 (277)
Q Consensus 166 -~~i~i~d~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~------ 235 (277)
+.|++||+.+++... ......+..++|||||++|+++..++ .|++||+.+++.. .+.++.... ....
T Consensus 174 ~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~--~~~~~~~~~~ 250 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDF--SSYRPTAITW 250 (582)
T ss_dssp EEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHH--HHHCCSEEEE
T ss_pred CeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcCh--hhhhhccccc
Confidence 779999988765432 23445689999999999999888888 8999999988877 555553221 1223
Q ss_pred --ecCCCceEEeecCCCeEEEEECcCcccee
Q 023772 236 --LTNSDAHVTGGSEDGYIYFWDLVDASVVA 264 (277)
Q Consensus 236 --~~~~~~~l~sgs~d~~i~iwd~~~~~~~~ 264 (277)
++|||.++++++.|+.+++|++ ++.+.
T Consensus 251 ~~~spdg~~~~~~~~~g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREGRSAVFID--GERVE 279 (582)
T ss_dssp EEECTTSCEEEEEEETTEEEEEET--TEEEC
T ss_pred eeEcCCCcEEEEEEcCCcEEEEEE--CCeec
Confidence 8999988899999999999999 66554
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=7.1e-21 Score=156.15 Aligned_cols=235 Identities=11% Similarity=0.154 Sum_probs=158.0
Q ss_pred EEEEEeCCCcEEEEcCC-CC--eeEEEEeccCccEEEEEEcCCCCEEEEEeCC-CcEEEEECC--CCc--eeEEeecccC
Q 023772 32 YCLSCGKDRTIRLWNPH-RG--IHIKTYKSHGREVRDVHVTADNSKLISCGGD-RQIFYWDVS--TGR--VIRKFRGHES 103 (277)
Q Consensus 32 ~l~s~s~d~~v~iwd~~-~~--~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d-~~v~~wd~~--~~~--~~~~~~~h~~ 103 (277)
++++++.|+.|++||+. ++ +.+..+ .|...+.+++|+|++++|++++.+ +.|++|++. +++ .+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 34455889999999985 33 233333 467789999999999999888876 999999997 554 344555444
Q ss_pred ceeEEEEecCCCEEEEEeC-CCcEEEEeCccCC-CcceEeeccccCcEEEEEec--CCeEEEee-cCCcEEEEEccC-Cc
Q 023772 104 EVNAVKFNEYSSVVVSAGY-DQSLRAWDCRSHS-TEPIQIIDSFQDSVMSVCLT--KTEIIGGS-VDGTVRTFDIRV-GR 177 (277)
Q Consensus 104 ~v~~i~~~~~~~~l~s~~~-d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~g~-~d~~i~i~d~~~-~~ 177 (277)
.+..++|+|+++.++.++. ++.|.+||+.... ......... ...+..+.++ +..+++++ .++.|.+||+.. ++
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 7788999999998766664 8899999984211 112222222 2224444444 44566666 889999999986 43
Q ss_pred cc-------ccCCCCCeeEEEEeCCCCEEEEEe-cCCeEEEEECCC--Cce--EEEEec----cccceeeeeeEecCCCc
Q 023772 178 EL-------SDDLGQPVNCISMSNDGNCILASC-LDSTLRLLDRST--GEL--LQEYKG----HICKSFKTDCCLTNSDA 241 (277)
Q Consensus 178 ~~-------~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~wd~~~--~~~--~~~~~~----~~~~~~~~~~~~~~~~~ 241 (277)
.. ....+..+..++|+|+++++++++ .++.+++||+.. ++. ...+.. +........++++|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~ 243 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 243 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSS
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCC
Confidence 21 112345788999999999776554 789999999953 433 222221 11112334577899998
Q ss_pred eEE-eecCCCeEEEEECc----CccceeeeccC
Q 023772 242 HVT-GGSEDGYIYFWDLV----DASVVAKFKAH 269 (277)
Q Consensus 242 ~l~-sgs~d~~i~iwd~~----~~~~~~~~~~h 269 (277)
+++ ++..|+.|++||+. +.+.+..+..+
T Consensus 244 ~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~ 276 (343)
T 1ri6_A 244 HLYACDRTASLITVFSVSEDGSVLSKEGFQPTE 276 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTSCCEEEEEEEECS
T ss_pred EEEEEecCCCEEEEEEEcCCCCceEEeeeecCC
Confidence 776 56689999999998 33455555443
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=9.1e-21 Score=161.19 Aligned_cols=158 Identities=14% Similarity=0.044 Sum_probs=126.3
Q ss_pred ccCCcEEEEEEeCCCCEEE----EEeCCCcEEEEcCCCC--------e---eEEEEeccCccEEEEEEcCC-CCEEEEEe
Q 023772 16 GHEGAVLAARFNGDGNYCL----SCGKDRTIRLWNPHRG--------I---HIKTYKSHGREVRDVHVTAD-NSKLISCG 79 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~----s~s~d~~v~iwd~~~~--------~---~~~~~~~h~~~v~~~~~~~~-~~~l~t~s 79 (277)
.|.++|.+++|+++|++|+ +|+.|++|+|||+.++ + ....+.+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4677899999999999999 8999999999997654 1 24556779999999999998 78999999
Q ss_pred CCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeecc-------ccCcEEEE
Q 023772 80 GDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDS-------FQDSVMSV 152 (277)
Q Consensus 80 ~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~ 152 (277)
.|++|++||++++..+....+|...|.+++|+|++++|++|+.||+|++||.+ ... ...+.. +...+.++
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~--~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE--KKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE--EEEECCCTTCCTTSCEEEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc--cccccCCcccCCCCceeEEEE
Confidence 99999999999987777777899999999999999999999999999999987 221 111211 22367788
Q ss_pred EecCCe-EE--EeecCC------cEEEEEccCC
Q 023772 153 CLTKTE-II--GGSVDG------TVRTFDIRVG 176 (277)
Q Consensus 153 ~~~~~~-~~--~g~~d~------~i~i~d~~~~ 176 (277)
.+.++. ++ ....|| .+++||++..
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 887654 22 233443 3889999864
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=7.3e-21 Score=178.22 Aligned_cols=251 Identities=12% Similarity=0.113 Sum_probs=188.3
Q ss_pred ceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCC-CeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR-GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
..+.+|.+.+.++.|+++ .++++++.|++++||.... +.....+..|. .+...+|+|++++|+.+. ++.|.+||++
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~ 273 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPD 273 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTT
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCC
Confidence 445789999999999988 6777888999999997643 33445555554 466789999999998874 8999999995
Q ss_pred CCceeEEeec-----------ccCceeEEEEe-cCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccC-cEEEEEec-C
Q 023772 91 TGRVIRKFRG-----------HESEVNAVKFN-EYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD-SVMSVCLT-K 156 (277)
Q Consensus 91 ~~~~~~~~~~-----------h~~~v~~i~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~-~ 156 (277)
..+. ..+.. |...+.++.|+ |+++.+++++ ++.+.+|+..... ...+..+.. .+..+.++ +
T Consensus 274 ~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~sdg 348 (1045)
T 1k32_A 274 TEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY---VLKVPEPLRIRYVRRGGDTK 348 (1045)
T ss_dssp TCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB---EEECSCCSCEEEEEECSSSE
T ss_pred ceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc---eEEccCCCcceEEeeeEcCC
Confidence 4443 35444 44578999999 9999998887 7899999986542 222333444 56666666 2
Q ss_pred CeEEEeecCCcEE-EEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeee
Q 023772 157 TEIIGGSVDGTVR-TFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDC 234 (277)
Q Consensus 157 ~~~~~g~~d~~i~-i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
..++.++.+..+. +||+..++.... .+...+..++|+|+|++|++++.++.|++||+.+++......+|... ...+
T Consensus 349 ~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~--v~~~ 426 (1045)
T 1k32_A 349 VAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM--ITDF 426 (1045)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC--CCCE
T ss_pred CeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCC--ccce
Confidence 3477777777888 889876543221 34467899999999999999999999999999999887776666432 3456
Q ss_pred EecCCCceEEeecCCC----------eEEEEECcCccceeeeccCccee
Q 023772 235 CLTNSDAHVTGGSEDG----------YIYFWDLVDASVVAKFKAHSLVV 273 (277)
Q Consensus 235 ~~~~~~~~l~sgs~d~----------~i~iwd~~~~~~~~~~~~h~~~v 273 (277)
+++|+|++|++++.++ .|++||+.+++ +..+..|...+
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~ 474 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHD 474 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBE
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCccc
Confidence 7899999998876654 89999999887 66677665433
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=8.9e-22 Score=178.10 Aligned_cols=244 Identities=9% Similarity=0.046 Sum_probs=173.4
Q ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe--eEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEE
Q 023772 20 AVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI--HIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~ 97 (277)
.|.+++|+|||++|++++. +.|++||+.++. ....+..|...+..++|+|++++|+.++ ++.|++||+.+++..+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 3789999999999999887 999999998872 3445667788899999999999999887 46899999998876654
Q ss_pred eecccCc----------------eeEEEEecCCCEEEEEeCCC---------------------------------cEEE
Q 023772 98 FRGHESE----------------VNAVKFNEYSSVVVSAGYDQ---------------------------------SLRA 128 (277)
Q Consensus 98 ~~~h~~~----------------v~~i~~~~~~~~l~s~~~d~---------------------------------~i~i 128 (277)
...+... +.++.|+||++.|++++.|+ .|.+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 4444332 47799999999999998776 7888
Q ss_pred EeCcc-CCCcceEeeccccCcEEEEE-ecCCeEEEeec-----CCcEEEEEccCCccccc--CCC-C---CeeEEEEeCC
Q 023772 129 WDCRS-HSTEPIQIIDSFQDSVMSVC-LTKTEIIGGSV-----DGTVRTFDIRVGRELSD--DLG-Q---PVNCISMSND 195 (277)
Q Consensus 129 wd~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~-----d~~i~i~d~~~~~~~~~--~~~-~---~v~~~~~s~~ 195 (277)
||+.+ .....+.....+...+..+. .+++.++.+.. +..|.+||+.+++.... ... . .+..++|+|+
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred EECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Confidence 99876 54322211112334444444 45556765543 56799999987754322 111 1 4568899999
Q ss_pred CCEEEEEecCCeEEEEECC-CCceEEEEeccccceeeeee-EecCCCceEE-eecCCC--eEEEEECcC-ccceeeecc
Q 023772 196 GNCILASCLDSTLRLLDRS-TGELLQEYKGHICKSFKTDC-CLTNSDAHVT-GGSEDG--YIYFWDLVD-ASVVAKFKA 268 (277)
Q Consensus 196 ~~~l~~~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~-sgs~d~--~i~iwd~~~-~~~~~~~~~ 268 (277)
|+++++++.|+..+||.+. .++ ...+..+... .... .++|+++.++ +++.|+ .+++|++.. +.....+..
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~--v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWS--VDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK 423 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSC--EEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeeecceE--EEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc
Confidence 9988899999988888764 344 6666655322 2233 5899998764 566666 899999874 555555554
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=2.8e-21 Score=173.98 Aligned_cols=247 Identities=10% Similarity=0.085 Sum_probs=171.9
Q ss_pred ccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCC-----CeeEEEEeccCcc--------------EEEEEEcC
Q 023772 10 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHR-----GIHIKTYKSHGRE--------------VRDVHVTA 70 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~-----~~~~~~~~~h~~~--------------v~~~~~~~ 70 (277)
+...+..|.+.+.+++|+|||++|+++ .|+.|++||+.+ ++.......+... +.++.|+|
T Consensus 112 ~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp 190 (706)
T 2z3z_A 112 KVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP 190 (706)
T ss_dssp EEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT
T ss_pred ceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC
Confidence 344456677889999999999999984 689999999988 7765544443332 48999999
Q ss_pred CCCEEEEEe---------------------------------CCCcEEEEECCCCceeEEee--cccCceeEEEEecCCC
Q 023772 71 DNSKLISCG---------------------------------GDRQIFYWDVSTGRVIRKFR--GHESEVNAVKFNEYSS 115 (277)
Q Consensus 71 ~~~~l~t~s---------------------------------~d~~v~~wd~~~~~~~~~~~--~h~~~v~~i~~~~~~~ 115 (277)
++++|++++ .+..|++||+++++...... .|...+..+.|+|+++
T Consensus 191 Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 270 (706)
T 2z3z_A 191 KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDEN 270 (706)
T ss_dssp TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSS
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCC
Confidence 999999987 45789999999887654332 4677899999999999
Q ss_pred EEEEEeCCC-----cEEEEeCccCCCcceEeeccccC---cEE--EEEe--cCCeEEEeecCCcEEEEEcc-CCccccc-
Q 023772 116 VVVSAGYDQ-----SLRAWDCRSHSTEPIQIIDSFQD---SVM--SVCL--TKTEIIGGSVDGTVRTFDIR-VGRELSD- 181 (277)
Q Consensus 116 ~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~---~~~--~~~~--~~~~~~~g~~d~~i~i~d~~-~~~~~~~- 181 (277)
.+++++.|+ .|++||+.+.............. .+. .+.. ++..++++..|+.+++|++. .+..+..
T Consensus 271 ~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 271 ILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV 350 (706)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC
T ss_pred EEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec
Confidence 999988776 89999987652111111111111 112 3333 44457788889999999876 3333222
Q ss_pred -CCCCCeeE-EEEeCCCCEEEEEecC-C----eEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCC----C
Q 023772 182 -DLGQPVNC-ISMSNDGNCILASCLD-S----TLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED----G 250 (277)
Q Consensus 182 -~~~~~v~~-~~~s~~~~~l~~~~~d-~----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d----~ 250 (277)
.....+.. ++|+|+|+.|+.++.+ + .|+.||..+++. ..+. +.. ....++++|++++++..+.+ +
T Consensus 351 ~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~l~-~~~--~~~~~~~spdg~~l~~~~~~~~~p~ 426 (706)
T 2z3z_A 351 TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT-KDLT-PES--GMHRTQLSPDGSAIIDIFQSPTVPR 426 (706)
T ss_dssp CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC-EESC-CSS--SEEEEEECTTSSEEEEEEECSSCSC
T ss_pred CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc-eecc-CCC--ceEEEEECCCCCEEEEEecCCCCCc
Confidence 22345665 7999999988665544 3 677778877653 3333 222 23456889999988765333 5
Q ss_pred eEEEEECcCcc
Q 023772 251 YIYFWDLVDAS 261 (277)
Q Consensus 251 ~i~iwd~~~~~ 261 (277)
.|++||+.+++
T Consensus 427 ~i~l~d~~~~~ 437 (706)
T 2z3z_A 427 KVTVTNIGKGS 437 (706)
T ss_dssp EEEEEESSSCE
T ss_pred EEEEEECCCCe
Confidence 79999999886
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=4.7e-21 Score=156.85 Aligned_cols=231 Identities=11% Similarity=0.106 Sum_probs=162.7
Q ss_pred CEEEEEeCCCcEEEEcCCCCeeEEEEeccCc--cEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCceeEEeecc-----c
Q 023772 31 NYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR--EVRDVHVTADNSKL-ISCGGDRQIFYWDVSTGRVIRKFRGH-----E 102 (277)
Q Consensus 31 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~~~~~~~~~~~h-----~ 102 (277)
+++++++.++.|++||..+++.+..+..... .+..++|+|+++++ ++++.++.|.+||+.+++.+..+... .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999988888764332 58899999999876 55566889999999999887766532 2
Q ss_pred CceeEEEEecCCCEEEEEe------------CCCcEEEEeCccCCCcceEeeccccCcEEEEEec--CCeEEEeecCCcE
Q 023772 103 SEVNAVKFNEYSSVVVSAG------------YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTV 168 (277)
Q Consensus 103 ~~v~~i~~~~~~~~l~s~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~d~~i 168 (277)
..+..+.++|+++.++.++ .++.|.+||+.+... ...+.. ...+..+.++ +..++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~--~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR--RKAFEA-PRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE--EEEEEC-CSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE--EEEEeC-CCCcceeEECCCCCEEEEe--CCeE
Confidence 2567899999999988886 579999999875432 222221 2223334444 4556666 6899
Q ss_pred EEEEccCCcccccC-CCCCeeEEEEeCCCCEEEEEecCC------------------------eEEEEECCCCceEEEEe
Q 023772 169 RTFDIRVGRELSDD-LGQPVNCISMSNDGNCILASCLDS------------------------TLRLLDRSTGELLQEYK 223 (277)
Q Consensus 169 ~i~d~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~------------------------~i~~wd~~~~~~~~~~~ 223 (277)
.+||+.+++..... .......+.|+|++.+++.++.++ .|.+||..+++.. .+.
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~ 235 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MRE 235 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEE
T ss_pred EEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Eee
Confidence 99999887654221 111111237889988765544332 4689999988775 322
Q ss_pred ccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 224 GHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
..........++++|++++++++ ++.|++||+.+++.+..+..+
T Consensus 236 ~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~ 279 (337)
T 1pby_B 236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP 279 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS
T ss_pred cCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC
Confidence 21112233456789999998887 799999999999888877644
No 150
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.6e-21 Score=165.77 Aligned_cols=196 Identities=14% Similarity=0.099 Sum_probs=145.9
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCC----------eeEE-----EEeccCccEEEEEEcCCCCEEE----EE
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRG----------IHIK-----TYKSHGREVRDVHVTADNSKLI----SC 78 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~----------~~~~-----~~~~h~~~v~~~~~~~~~~~l~----t~ 78 (277)
...++.+++++++.++++++.|+ +++|+.... ..+. ....+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578899999999999999988 899863210 0111 1123566899999999999999 88
Q ss_pred eCCCcEEEEECCCC--------ce---eEEeecccCceeEEEEecC-CCEEEEEeCCCcEEEEeCccCCCcceEeecccc
Q 023772 79 GGDRQIFYWDVSTG--------RV---IRKFRGHESEVNAVKFNEY-SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQ 146 (277)
Q Consensus 79 s~d~~v~~wd~~~~--------~~---~~~~~~h~~~v~~i~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 146 (277)
+.|++|++||++++ +. +..+.+|...|.+++|+|+ ++++++++.||+|++||++... .......+.
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~--~~~~~~~~~ 192 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV--KVCATLPST 192 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE--EEEEEECGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc--ceeeccCCC
Confidence 99999999998754 22 4556679999999999998 7899999999999999998652 233334466
Q ss_pred CcEEEEEecC--CeEEEeecCCcEEEEEccCCcc--cccC------CCCCeeEEEEeCCCCEEEEE-ecCC------eEE
Q 023772 147 DSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRE--LSDD------LGQPVNCISMSNDGNCILAS-CLDS------TLR 209 (277)
Q Consensus 147 ~~~~~~~~~~--~~~~~g~~d~~i~i~d~~~~~~--~~~~------~~~~v~~~~~s~~~~~l~~~-~~d~------~i~ 209 (277)
..+.++.+++ +.+++|+.||+|++||++.... +... +...+.+++|++++.++++. ..|| .++
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence 7788888875 4599999999999999982211 1111 11278899999988776553 3443 389
Q ss_pred EEECCCC
Q 023772 210 LLDRSTG 216 (277)
Q Consensus 210 ~wd~~~~ 216 (277)
+|+++..
T Consensus 273 i~~l~~~ 279 (434)
T 2oit_A 273 MALLPKK 279 (434)
T ss_dssp EEECCCT
T ss_pred EEEeccC
Confidence 9999754
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=6.3e-21 Score=171.67 Aligned_cols=243 Identities=12% Similarity=0.094 Sum_probs=168.5
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeE-EEEeccC-----------------ccEEEEEEcCCCCEEEEEeCCC
Q 023772 21 VLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI-KTYKSHG-----------------REVRDVHVTADNSKLISCGGDR 82 (277)
Q Consensus 21 V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~-~~~~~h~-----------------~~v~~~~~~~~~~~l~t~s~d~ 82 (277)
+..+.|. |+.+++++.|+ | +||+.+++.+ ..+..|. ..|.+++|+|+ ++++.+ .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 4457777 66777888888 8 9999998773 3333332 46999999999 666655 459
Q ss_pred cEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCcc-----CCCcceEeeccccCc---------
Q 023772 83 QIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRS-----HSTEPIQIIDSFQDS--------- 148 (277)
Q Consensus 83 ~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~~~~~~~~--------- 148 (277)
.+++||+.+++... +..+...+.+++|+|+++.|+++ .|+.|++||+.+ ... ..........
T Consensus 102 ~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~--~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 102 GLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA--IAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp EEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC--EESCSCCBTTEEESSCCGG
T ss_pred EEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc--EEeccCCCCCeEcccchhh
Confidence 99999999887654 44567788899999999999985 789999999976 432 2222221121
Q ss_pred -----EEEEEe--cCCeEEEee---------------------------------cCCcEEEEEccCCccccc----CCC
Q 023772 149 -----VMSVCL--TKTEIIGGS---------------------------------VDGTVRTFDIRVGRELSD----DLG 184 (277)
Q Consensus 149 -----~~~~~~--~~~~~~~g~---------------------------------~d~~i~i~d~~~~~~~~~----~~~ 184 (277)
+..+.+ +++.++.++ .+..|.+||+.+++.... ...
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 257 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE 257 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc
Confidence 233444 455677776 346799999987764322 233
Q ss_pred CCeeEEEEeCCCCEEEEEecCC-----eEEEEECCCCceEEEEeccccce---eeeeeEecC--CCceEEeecCCCeEEE
Q 023772 185 QPVNCISMSNDGNCILASCLDS-----TLRLLDRSTGELLQEYKGHICKS---FKTDCCLTN--SDAHVTGGSEDGYIYF 254 (277)
Q Consensus 185 ~~v~~~~~s~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~l~sgs~d~~i~i 254 (277)
..+.+++|+|+|++|++++.|+ .|++||..+++....+....... ....+.++| +++++++++.|+.+++
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l 337 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHL 337 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEE
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEE
Confidence 5688999999999999988776 89999999884443332211111 123457899 9999999999999999
Q ss_pred EECc-CccceeeeccCccee
Q 023772 255 WDLV-DASVVAKFKAHSLVV 273 (277)
Q Consensus 255 wd~~-~~~~~~~~~~h~~~v 273 (277)
|+++ ++..+..+..|...+
T Consensus 338 ~~~~~~~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 338 YLYDTTGRLIRQVTKGEWEV 357 (706)
T ss_dssp EEEETTSCEEEECCCSSSCE
T ss_pred EEEECCCCEEEecCCCCeEE
Confidence 9887 677778888776544
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=2.4e-19 Score=148.72 Aligned_cols=245 Identities=11% Similarity=0.101 Sum_probs=162.5
Q ss_pred cCCcEEEEEEeCCCCEEEEEeCC----CcEEEEcCCC--Cee--EEEEeccCccEEEEEEcCCCCEEEEEe-CCCcEEEE
Q 023772 17 HEGAVLAARFNGDGNYCLSCGKD----RTIRLWNPHR--GIH--IKTYKSHGREVRDVHVTADNSKLISCG-GDRQIFYW 87 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~s~s~d----~~v~iwd~~~--~~~--~~~~~~h~~~v~~~~~~~~~~~l~t~s-~d~~v~~w 87 (277)
|...+..++|+|+|++|++++.+ +.+++|++.. ++. +.....+......+++ ++++|++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66777889999999999999886 8999998754 443 3344445556777777 777777766 68899999
Q ss_pred ECCCCceeEEe---ec-----------ccCceeEEEEecCCCEEEEEe-CCCcEEEEeCccCCC----c-c------eEe
Q 023772 88 DVSTGRVIRKF---RG-----------HESEVNAVKFNEYSSVVVSAG-YDQSLRAWDCRSHST----E-P------IQI 141 (277)
Q Consensus 88 d~~~~~~~~~~---~~-----------h~~~v~~i~~~~~~~~l~s~~-~d~~i~iwd~~~~~~----~-~------~~~ 141 (277)
++.....+... .. +...+.++.|+|++++++.++ .++.|.+|++..... + . ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754322211 11 123357899999999665544 589999998865432 1 0 111
Q ss_pred eccccCcEEEEEecCC--eEEEee-cCCcEEEEEccCCcc--c---cc--CCCCCeeEEEEeCCCCEEEEEec--CCeEE
Q 023772 142 IDSFQDSVMSVCLTKT--EIIGGS-VDGTVRTFDIRVGRE--L---SD--DLGQPVNCISMSNDGNCILASCL--DSTLR 209 (277)
Q Consensus 142 ~~~~~~~~~~~~~~~~--~~~~g~-~d~~i~i~d~~~~~~--~---~~--~~~~~v~~~~~s~~~~~l~~~~~--d~~i~ 209 (277)
..........+.++++ .++++. .++.|.+||+..++. + .. ........++|+|+|++|+++.. ++.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 1122333455666554 465555 689999999986532 1 11 11234679999999999877665 48999
Q ss_pred EEECC--CCc--eEEEEeccccceeeeeeEecCCCceEEeec-CCCeEEEE--ECcCccceeee
Q 023772 210 LLDRS--TGE--LLQEYKGHICKSFKTDCCLTNSDAHVTGGS-EDGYIYFW--DLVDASVVAKF 266 (277)
Q Consensus 210 ~wd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-~d~~i~iw--d~~~~~~~~~~ 266 (277)
+|++. +++ .+..+.. ......++++|++++|++++ .++.|.+| |..++++....
T Consensus 286 v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 99985 444 3333332 12345578899999887765 77999996 55577665443
No 153
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.87 E-value=1.4e-18 Score=139.38 Aligned_cols=239 Identities=13% Similarity=0.204 Sum_probs=171.8
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEec------cCccEEEEEEc-CCCCEEEEEeC-CCcEEEE
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKS------HGREVRDVHVT-ADNSKLISCGG-DRQIFYW 87 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~------h~~~v~~~~~~-~~~~~l~t~s~-d~~v~~w 87 (277)
+|.....+++++++|+++++...++.|++||.. ++.+..+.. +...+..+++. +++..+++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 456778999999999998898889999999977 566666642 33568899994 66666666533 8899999
Q ss_pred ECCCCceeEEeec-ccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeec--cccCcEEEEEecCC--eEEEe
Q 023772 88 DVSTGRVIRKFRG-HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIID--SFQDSVMSVCLTKT--EIIGG 162 (277)
Q Consensus 88 d~~~~~~~~~~~~-h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~g 162 (277)
| .+++.+..+.. +...+.++++.++++++++...++.|.+||.... ....+. .....+..+.++++ .+++.
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN---VLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC---EEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC---EEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 9 56676666643 3457889999999998888888899999996432 222221 22234566666653 35555
Q ss_pred ecCCcEEEEEccCCccccc--CC--CCCeeEEEEeCCCCEEEEEecCC-eEEEEECCCCceEEEEeccccceeeeeeEec
Q 023772 163 SVDGTVRTFDIRVGRELSD--DL--GQPVNCISMSNDGNCILASCLDS-TLRLLDRSTGELLQEYKGHICKSFKTDCCLT 237 (277)
Q Consensus 163 ~~d~~i~i~d~~~~~~~~~--~~--~~~v~~~~~s~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (277)
..++.|++||.... .+.. .. ...+..++++++|+++++...++ .|++||. +++.+..+..+........++++
T Consensus 182 ~~~~~i~~~~~~g~-~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 182 NRAHCVKVFNYEGQ-YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp GGGTEEEEEETTCC-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred CCCCEEEEEcCCCC-EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 67899999997533 2211 11 14688999999999888887776 9999996 46777777655333334556788
Q ss_pred CCCceEEeecCCCeEEEEECcCccc
Q 023772 238 NSDAHVTGGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 238 ~~~~~l~sgs~d~~i~iwd~~~~~~ 262 (277)
+++.++++ +.|+.|++|+......
T Consensus 260 ~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 260 DDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp TTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred CCCcEEEE-CCCCeEEEEEcccccc
Confidence 99987777 5699999999876543
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=2e-19 Score=168.52 Aligned_cols=238 Identities=11% Similarity=0.011 Sum_probs=179.6
Q ss_pred ceeeccCC-cEEEEEEeCCCCEEEEEeCCCcEE-EEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 12 NVLKGHEG-AVLAARFNGDGNYCLSCGKDRTIR-LWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 12 ~~l~~H~~-~V~~~~~~~~~~~l~s~s~d~~v~-iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
..+..|.+ .+..+.|+ +|+.+++++.+..+. +||..+++.. .+..|...+..++|+|++++|++++.++.|++||+
T Consensus 330 ~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 330 LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEEC
Confidence 34567777 89999999 999999999988888 9998877644 34478889999999999999999999999999999
Q ss_pred CCCceeEEeecccCceeEEEEecCCCEEEEEeCCC----------cEEEEeCccCCCcceEeeccccCcEEEEEecC--C
Q 023772 90 STGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ----------SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--T 157 (277)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 157 (277)
++++.......|...+.+++|+|+++++++++.++ .|++||+.... ...+..+...+..+.+++ .
T Consensus 408 ~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~~~~~~~~~~~~spdG~ 484 (1045)
T 1k32_A 408 ETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATTENSHDYAPAFDADSK 484 (1045)
T ss_dssp TTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSCSSSBEEEEEECTTSC
T ss_pred CCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc---EEEeeCCCcccCCceEcCCCC
Confidence 99998877778999999999999999998887754 89999987542 333444555555666654 5
Q ss_pred eEEEeecCCcEEEEEccCCcc-------------------------------------------c-c-cCCCCCeeEEEE
Q 023772 158 EIIGGSVDGTVRTFDIRVGRE-------------------------------------------L-S-DDLGQPVNCISM 192 (277)
Q Consensus 158 ~~~~g~~d~~i~i~d~~~~~~-------------------------------------------~-~-~~~~~~v~~~~~ 192 (277)
.++.++.++....|+...... + . ......+..+++
T Consensus 485 ~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~ 564 (1045)
T 1k32_A 485 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP 564 (1045)
T ss_dssp EEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEE
T ss_pred EEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEE
Confidence 577777766655555321100 0 0 012245788999
Q ss_pred eCCCCEEEE-------------EecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 193 SNDGNCILA-------------SCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 193 s~~~~~l~~-------------~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
+|+|.++++ ...+..|++||+.+++.. .+. .......++|||++|++++.| .|++||+.+
T Consensus 565 s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~-----~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~ 637 (1045)
T 1k32_A 565 LESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-EVK-----NNLTDLRLSADRKTVMVRKDD-GKIYTFPLE 637 (1045)
T ss_dssp CSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE-EEE-----EEEEEEEECTTSCEEEEEETT-SCEEEEESS
T ss_pred cCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE-Eee-----cCcceEEECCCCCEEEEEcCC-cEEEEeCcc
Confidence 999987775 123457889999888753 332 123445789999999998876 799999998
Q ss_pred cc
Q 023772 260 AS 261 (277)
Q Consensus 260 ~~ 261 (277)
++
T Consensus 638 ~~ 639 (1045)
T 1k32_A 638 KP 639 (1045)
T ss_dssp CT
T ss_pred Cc
Confidence 86
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=1.7e-19 Score=149.99 Aligned_cols=240 Identities=12% Similarity=0.106 Sum_probs=161.7
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCC-CCeeEEEEecc-CccEEEEEEcCCCCE--EEEEe-------------C
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPH-RGIHIKTYKSH-GREVRDVHVTADNSK--LISCG-------------G 80 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~~h-~~~v~~~~~~~~~~~--l~t~s-------------~ 80 (277)
...+..++|+|+|++|++++.+ .+++|++. +++........ .+.+..++|+|++++ +++++ .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 3467789999999999999988 99999987 77665433211 123556899999984 45553 6
Q ss_pred CCcEEEEECC-CCceeEEee----cccCceeEEEEecCCCEEEEEe-CCCcEEEEeCc-cCCCcceEeec--cccCcEEE
Q 023772 81 DRQIFYWDVS-TGRVIRKFR----GHESEVNAVKFNEYSSVVVSAG-YDQSLRAWDCR-SHSTEPIQIID--SFQDSVMS 151 (277)
Q Consensus 81 d~~v~~wd~~-~~~~~~~~~----~h~~~v~~i~~~~~~~~l~s~~-~d~~i~iwd~~-~~~~~~~~~~~--~~~~~~~~ 151 (277)
++++.+|++. +++....+. .+...+.++.|+|++++++++. .++.|++|++. +.......... .+......
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 8999999997 466544333 2456789999999999887765 46899999987 44322222222 11344566
Q ss_pred EEecCC--eEEEee-cCCcEEEEEcc--CCcc------cccCC----C-C-------CeeEEE-EeCCCCEEEEEecC-C
Q 023772 152 VCLTKT--EIIGGS-VDGTVRTFDIR--VGRE------LSDDL----G-Q-------PVNCIS-MSNDGNCILASCLD-S 206 (277)
Q Consensus 152 ~~~~~~--~~~~g~-~d~~i~i~d~~--~~~~------~~~~~----~-~-------~v~~~~-~s~~~~~l~~~~~d-~ 206 (277)
+.++++ .++++. .++.+.+|++. +++. +.... + . .+..++ |+|+|++|+++..+ +
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 666654 466655 47899999865 3331 11111 1 1 478899 99999988776543 2
Q ss_pred -----eEEEEECC-CCceEEE---EeccccceeeeeeEecC---CCceEEeecC-CCeEEEEECcCc
Q 023772 207 -----TLRLLDRS-TGELLQE---YKGHICKSFKTDCCLTN---SDAHVTGGSE-DGYIYFWDLVDA 260 (277)
Q Consensus 207 -----~i~~wd~~-~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~l~sgs~-d~~i~iwd~~~~ 260 (277)
.|++|++. ++++... ...+. ......+++| ++++|++++. ++.|++|+++..
T Consensus 278 ~~~~~~i~v~~~~~~g~~~~~~~~~~~~~--~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 278 FELQGYIAGFKLRDCGSIEKQLFLSPTPT--SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTSCCEEEEEEECTTSCEEEEEEEEECSS--CCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCeEEEEEECCCCCEEEeeeeeecCC--CCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999996 5665432 22221 1123356788 7999988876 589999998765
No 156
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=4.2e-20 Score=166.66 Aligned_cols=244 Identities=11% Similarity=0.027 Sum_probs=166.0
Q ss_pred ceeeccCC---cEEEEEEeCCCCEEEEEeCC---------CcEEEEcCCCCeeEEEEe---ccCccEEEEEEcCCCCEEE
Q 023772 12 NVLKGHEG---AVLAARFNGDGNYCLSCGKD---------RTIRLWNPHRGIHIKTYK---SHGREVRDVHVTADNSKLI 76 (277)
Q Consensus 12 ~~l~~H~~---~V~~~~~~~~~~~l~s~s~d---------~~v~iwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~ 76 (277)
..+.+|.. .|.+++|+|||++|++++.+ +.+.+||+.+++. ..+. .|...+..++|+|++++|+
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la 129 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLI 129 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEE
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEE
Confidence 34555654 49999999999999999875 7888999998875 3333 3444588999999999999
Q ss_pred EEeCCCcEEEEECCCCceeEEeecccCce------------------eEEEEecCCCEEEEEeCCC--------------
Q 023772 77 SCGGDRQIFYWDVSTGRVIRKFRGHESEV------------------NAVKFNEYSSVVVSAGYDQ-------------- 124 (277)
Q Consensus 77 t~s~d~~v~~wd~~~~~~~~~~~~h~~~v------------------~~i~~~~~~~~l~s~~~d~-------------- 124 (277)
.++. +.|++||+.+++..+....+...+ .++.|+|+++.|++++.|+
T Consensus 130 ~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~ 208 (723)
T 1xfd_A 130 FIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS 208 (723)
T ss_dssp EEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred EEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc
Confidence 9886 799999999988766555544333 7899999999999988653
Q ss_pred --------------------cEEEEeCccCCCcceEeecc------ccCcEEEEEecCCe--EEEeec----CCcEEEEE
Q 023772 125 --------------------SLRAWDCRSHSTEPIQIIDS------FQDSVMSVCLTKTE--IIGGSV----DGTVRTFD 172 (277)
Q Consensus 125 --------------------~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~g~~----d~~i~i~d 172 (277)
+|++||+.+... ...+.. +...+..+.++++. +++... +..|.+||
T Consensus 209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~--~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTH--DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp SSCCCEEEECCBTTSCCCEEEEEEEESSSSCC--CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred CCCcceeccCCCCCCCCCeeEEEEEECCCCce--eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 799999876532 122222 13456667777654 544432 35799999
Q ss_pred ccCCccccc---CCCCCe----eEEEEeCCCCEEEE--EecCC------eEEEEE-CCCCc--eEEEEeccccceeeeee
Q 023772 173 IRVGRELSD---DLGQPV----NCISMSNDGNCILA--SCLDS------TLRLLD-RSTGE--LLQEYKGHICKSFKTDC 234 (277)
Q Consensus 173 ~~~~~~~~~---~~~~~v----~~~~~s~~~~~l~~--~~~d~------~i~~wd-~~~~~--~~~~~~~~~~~~~~~~~ 234 (277)
+.+++.... .....+ ..++|+|+|+.|+. +..++ .|++|| ...++ +...+.... .......
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~~~ 365 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD-WDVTKIL 365 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS-SCEEEEE
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC-eEEEeee
Confidence 987764321 111222 37899999997765 45666 577788 34444 134444221 1122224
Q ss_pred EecCCCceEEeec-CC--CeEEEEECcCc
Q 023772 235 CLTNSDAHVTGGS-ED--GYIYFWDLVDA 260 (277)
Q Consensus 235 ~~~~~~~~l~sgs-~d--~~i~iwd~~~~ 260 (277)
.++|+++.|+..+ .+ +.+++|++...
T Consensus 366 ~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 366 AYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred EEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 7899999887544 44 78999998653
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=3.5e-20 Score=167.15 Aligned_cols=241 Identities=9% Similarity=0.070 Sum_probs=164.8
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCc---cEEEEEEcCCCCEEEEEeC---------CCcEEEEECC
Q 023772 23 AARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR---EVRDVHVTADNSKLISCGG---------DRQIFYWDVS 90 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~t~s~---------d~~v~~wd~~ 90 (277)
.+.|+|+|+++++ +.|++|++||..+++....+..|.. .+.+++|+|++++|+.++. ++.|++||++
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 7899999966555 5699999999999988777776644 3899999999999998876 7899999999
Q ss_pred CCcee--EEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccC-------------------cE
Q 023772 91 TGRVI--RKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD-------------------SV 149 (277)
Q Consensus 91 ~~~~~--~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-------------------~~ 149 (277)
+++.+ ..+ ...+..+.|+||++.|+.+. |+.|++||+.+.....+. ...... ..
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT-FNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC-CCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe-cCCCcCCeEcccccceeeeecccCccc
Confidence 98863 222 35688899999999999885 789999998765332111 111111 12
Q ss_pred EEEEecCCeEEEeecCC----------------------------------cEEEEEccCCccc---c-------cCCCC
Q 023772 150 MSVCLTKTEIIGGSVDG----------------------------------TVRTFDIRVGREL---S-------DDLGQ 185 (277)
Q Consensus 150 ~~~~~~~~~~~~g~~d~----------------------------------~i~i~d~~~~~~~---~-------~~~~~ 185 (277)
.++.++++.++.++.|. .|++||+.+++.. . ..+..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 33444456688776552 7889999876542 1 12344
Q ss_pred CeeEEEEeCCCCEEEEEecC----CeEEEEE----CCCCceEEEE----ecccccee---eeeeEecCCCceEEe--ecC
Q 023772 186 PVNCISMSNDGNCILASCLD----STLRLLD----RSTGELLQEY----KGHICKSF---KTDCCLTNSDAHVTG--GSE 248 (277)
Q Consensus 186 ~v~~~~~s~~~~~l~~~~~d----~~i~~wd----~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~l~s--gs~ 248 (277)
.+..++|+||++.+++.... ..|++|| ..++++...+ .++..... .....++|+|+.++. +..
T Consensus 254 ~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 254 YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEcc
Confidence 68899999998766664332 2488899 8777655443 23322111 014578999986543 445
Q ss_pred CC--eEEEEECcCccceeeeccCc
Q 023772 249 DG--YIYFWDLVDASVVAKFKAHS 270 (277)
Q Consensus 249 d~--~i~iwd~~~~~~~~~~~~h~ 270 (277)
+| .|++||+.+++ ...+..+.
T Consensus 334 ~g~~~l~~~~~~~~~-~~~lt~~~ 356 (719)
T 1z68_A 334 DGYKHIHYIKDTVEN-AIQITSGK 356 (719)
T ss_dssp TSCEEEEEESSCSTT-CEECSCSS
T ss_pred CCceEEEEEECCCCc-eEecccCc
Confidence 55 57778887766 45555444
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=4.6e-18 Score=140.15 Aligned_cols=232 Identities=12% Similarity=0.103 Sum_probs=152.4
Q ss_pred eCCCcEEEEcC--CCCeeEE-EEeccCccEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCc--eeEEeecccCceeEE
Q 023772 37 GKDRTIRLWNP--HRGIHIK-TYKSHGREVRDVHVTADNSKLISCGG---DRQIFYWDVSTGR--VIRKFRGHESEVNAV 108 (277)
Q Consensus 37 s~d~~v~iwd~--~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~t~s~---d~~v~~wd~~~~~--~~~~~~~h~~~v~~i 108 (277)
+.++.+.+|++ .+++... ....+...+..++|+|+++ |++++. ++.|.+||+.+++ .+..+..+...+..+
T Consensus 13 ~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp SSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred CCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 34567777754 4565433 3344567788999999998 655544 6899999997765 455555677788899
Q ss_pred EEecCCCEEEEEe-CCCcEEEEeCccC-CCcceEeeccc---------cCcEEEEEecC--CeEEEeecCCcEEEEEcc-
Q 023772 109 KFNEYSSVVVSAG-YDQSLRAWDCRSH-STEPIQIIDSF---------QDSVMSVCLTK--TEIIGGSVDGTVRTFDIR- 174 (277)
Q Consensus 109 ~~~~~~~~l~s~~-~d~~i~iwd~~~~-~~~~~~~~~~~---------~~~~~~~~~~~--~~~~~g~~d~~i~i~d~~- 174 (277)
+++|+++++++++ .++.+.+|++... ....+...... ...+..+.+++ +.+++...++.|.+||+.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 9999999888887 7899999998532 22222222110 11244555554 435555668899999998
Q ss_pred CCccc-----ccCCCCCeeEEEEeCCCCEEEE-EecCCeEEEEECCC--Cce--EEEEecccc----ceeeeeeEecCCC
Q 023772 175 VGREL-----SDDLGQPVNCISMSNDGNCILA-SCLDSTLRLLDRST--GEL--LQEYKGHIC----KSFKTDCCLTNSD 240 (277)
Q Consensus 175 ~~~~~-----~~~~~~~v~~~~~s~~~~~l~~-~~~d~~i~~wd~~~--~~~--~~~~~~~~~----~~~~~~~~~~~~~ 240 (277)
.++.. ....+..+..++|+|+|+++++ +..++.+++|++.. ++. +..+..... ......++++|+|
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG 251 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG 251 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence 33221 1123346788999999996655 56788999999864 543 223322211 1234557899999
Q ss_pred ceE-EeecCCCeEEEEECcC---ccceeeeccC
Q 023772 241 AHV-TGGSEDGYIYFWDLVD---ASVVAKFKAH 269 (277)
Q Consensus 241 ~~l-~sgs~d~~i~iwd~~~---~~~~~~~~~h 269 (277)
++| +++..++.|.+|++.. .+.+..+..|
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~ 284 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE 284 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGCEEEEEEEECS
T ss_pred CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC
Confidence 977 5566789999999973 2455555543
No 159
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=7.3e-18 Score=138.23 Aligned_cols=238 Identities=14% Similarity=0.198 Sum_probs=173.7
Q ss_pred cCCcEEEEEEeCCCCEEEEEeCC------------------------CcEEEEcCCCCeeEEEEe-ccCccEEEEEEcCC
Q 023772 17 HEGAVLAARFNGDGNYCLSCGKD------------------------RTIRLWNPHRGIHIKTYK-SHGREVRDVHVTAD 71 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~s~s~d------------------------~~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~ 71 (277)
--+.+.+++++++|+++++.+.+ ++|.+||..+++.+..+. .+...+..++++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 34779999999999999988877 479999999888877665 34457899999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCc-eeEEe---------ecccCceeEEEEec-CCCEEEEEe-CCCcEEEEeCccCCCcce
Q 023772 72 NSKLISCGGDRQIFYWDVSTGR-VIRKF---------RGHESEVNAVKFNE-YSSVVVSAG-YDQSLRAWDCRSHSTEPI 139 (277)
Q Consensus 72 ~~~l~t~s~d~~v~~wd~~~~~-~~~~~---------~~h~~~v~~i~~~~-~~~~l~s~~-~d~~i~iwd~~~~~~~~~ 139 (277)
++.+++...++.|++||.+... .+..+ ..+-.....++++| ++.++++.+ .++.|++|+... . ..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~--~~ 178 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-K--FV 178 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-C--EE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-C--EE
Confidence 9988888889999999986542 45555 23445688999999 788888886 699999999532 2 22
Q ss_pred Eeecc----------ccCcEEEEEecCC--e-EEEeecCCcEEEEEccCCccccc----CCCCCeeEEEEeC------CC
Q 023772 140 QIIDS----------FQDSVMSVCLTKT--E-IIGGSVDGTVRTFDIRVGRELSD----DLGQPVNCISMSN------DG 196 (277)
Q Consensus 140 ~~~~~----------~~~~~~~~~~~~~--~-~~~g~~d~~i~i~d~~~~~~~~~----~~~~~v~~~~~s~------~~ 196 (277)
..+.. .......+.+++. . +++...++.|++||..+++.+.. ..+..+..++|+| +|
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g 258 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNG 258 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEEC
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCC
Confidence 22211 1122455666543 3 56667788999999986654332 2345788899999 33
Q ss_pred CEEEEEecCCeEEEEECCCCceEEEEe---ccccceeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 197 NCILASCLDSTLRLLDRSTGELLQEYK---GHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 197 ~~l~~~~~d~~i~~wd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
+.+++...+..+++||..+++.+..+. ++ .......+++++|.++++...++.|++|++..
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~--~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKH--FDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTCCEEEEECCSSSC--CSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CEEeccCCCcEEEEEEcCCCeEEEEEcCCCCc--cCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 322333345589999999999988874 23 23345567899998888889999999999864
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=1.9e-19 Score=162.98 Aligned_cols=242 Identities=9% Similarity=0.029 Sum_probs=164.8
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCcc-----EEEEEEcCCCCEEEEEeCC---------Cc
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGRE-----VRDVHVTADNSKLISCGGD---------RQ 83 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~t~s~d---------~~ 83 (277)
......+.|+|||++++++ |++|++||+.+++....+..|... ..+..|+|++++|+.++.+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3446689999999999886 999999999999988888877643 2447899999999998876 55
Q ss_pred EEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcE--------------
Q 023772 84 IFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSV-------------- 149 (277)
Q Consensus 84 v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------------- 149 (277)
+.+||++++++. .+..|...+....|+||++.|+.+ .|+.|++|++.......+. .......+
T Consensus 94 ~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt-~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 94 YDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRIT-WTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECC-SCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEc-CCCCccceecCcccccccchhc
Confidence 679999998865 466678889999999999999987 5789999998764322111 11111111
Q ss_pred -----EEEEecCCeEEEeecCC------------------------------------cEEEEEccC---C---cccccC
Q 023772 150 -----MSVCLTKTEIIGGSVDG------------------------------------TVRTFDIRV---G---RELSDD 182 (277)
Q Consensus 150 -----~~~~~~~~~~~~g~~d~------------------------------------~i~i~d~~~---~---~~~~~~ 182 (277)
..++++++.++.++.|. +|.+||+.+ + +.....
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 33444555566554221 477888887 6 221111
Q ss_pred -------CCCCeeEEEEeCCCCEEEEEec----CCeEEEEECCCCc----eE--EEE--ecccccee---eeeeEecCCC
Q 023772 183 -------LGQPVNCISMSNDGNCILASCL----DSTLRLLDRSTGE----LL--QEY--KGHICKSF---KTDCCLTNSD 240 (277)
Q Consensus 183 -------~~~~v~~~~~s~~~~~l~~~~~----d~~i~~wd~~~~~----~~--~~~--~~~~~~~~---~~~~~~~~~~ 240 (277)
....+..++|+|||+.++.... +..|++||+.+++ +. ..+ .++..... .....++|||
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 3345788999999996665432 3379999998876 22 122 22321111 1245789999
Q ss_pred ceEE-eecC-C--CeEEEEECcCcccee
Q 023772 241 AHVT-GGSE-D--GYIYFWDLVDASVVA 264 (277)
Q Consensus 241 ~~l~-sgs~-d--~~i~iwd~~~~~~~~ 264 (277)
+.++ ..+. + ..|++||...++...
T Consensus 331 ~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 331 NSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred CEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 9766 5543 3 468899998765543
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=4.2e-18 Score=142.33 Aligned_cols=257 Identities=11% Similarity=0.058 Sum_probs=170.4
Q ss_pred ccceeeccCCcEEE-----EEEeCCCCEEEEEeC-CCc--EEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCC
Q 023772 10 EANVLKGHEGAVLA-----ARFNGDGNYCLSCGK-DRT--IRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGD 81 (277)
Q Consensus 10 ~~~~l~~H~~~V~~-----~~~~~~~~~l~s~s~-d~~--v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d 81 (277)
+...+..|.+.... .+|+|||++|+.++. ++. |.+||+.+++.......+...+....|+|++++|+.++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 34556677776666 889999999998887 674 8888999988777777776666678899999999999999
Q ss_pred CcEEEEECCCCceeEEeecccCceeEEE--EecCCCEEEEE----------------------eCCCcEEEEeCccCCCc
Q 023772 82 RQIFYWDVSTGRVIRKFRGHESEVNAVK--FNEYSSVVVSA----------------------GYDQSLRAWDCRSHSTE 137 (277)
Q Consensus 82 ~~v~~wd~~~~~~~~~~~~h~~~v~~i~--~~~~~~~l~s~----------------------~~d~~i~iwd~~~~~~~ 137 (277)
+.+++||+.+++....+..+...+.... +++++++++.. +.+..|.+||+.+....
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 9999999999987766666655554343 47888888743 24467999998765332
Q ss_pred ceEeeccccCcEEEEEecC-C--eEEEeec------CCcEEEEEccCCccccc-CCC--CCeeEEEEeCCCCEEEEEec-
Q 023772 138 PIQIIDSFQDSVMSVCLTK-T--EIIGGSV------DGTVRTFDIRVGRELSD-DLG--QPVNCISMSNDGNCILASCL- 204 (277)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~-~--~~~~g~~------d~~i~i~d~~~~~~~~~-~~~--~~v~~~~~s~~~~~l~~~~~- 204 (277)
.+......+..+.+++ + .++.... ...|.++|...+..... ... ..+....|+|+|+.|+..+.
T Consensus 182 ---~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 182 ---VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258 (388)
T ss_dssp ---EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred ---EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecC
Confidence 2223334455666666 3 4555443 23677788765432221 111 24778899999997765443
Q ss_pred CC----eEEEEECCCCceE--EEEecccccee-eeeeEecCCCceEEee---------cCCCeEEEEECcCccceeeecc
Q 023772 205 DS----TLRLLDRSTGELL--QEYKGHICKSF-KTDCCLTNSDAHVTGG---------SEDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 205 d~----~i~~wd~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~l~sg---------s~d~~i~iwd~~~~~~~~~~~~ 268 (277)
++ .|++||+.+++.. ..+.++..... .....++|+|+.|+.. ..+..|++||+.+++. ..+..
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~ 337 (388)
T 3pe7_A 259 KGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVAR 337 (388)
T ss_dssp TTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEE
T ss_pred CCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEecc
Confidence 22 3999999988743 33333110000 1112578888877743 4567899999998765 44554
Q ss_pred Cc
Q 023772 269 HS 270 (277)
Q Consensus 269 h~ 270 (277)
|.
T Consensus 338 ~~ 339 (388)
T 3pe7_A 338 HD 339 (388)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 162
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.83 E-value=3.4e-17 Score=147.55 Aligned_cols=243 Identities=16% Similarity=0.136 Sum_probs=166.2
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCC-----cEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCc-------
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDR-----TIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQ------- 83 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~-----~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~------- 83 (277)
+|...+..++|||||++|+.++.++ .|++||+.+++.+.....+ ..+..++|+|+++.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 4555788999999999999665443 8999999999876543322 23678999999999998887765
Q ss_pred ---------EEEEECCCCce----eEEeecccCceeEEEEecCCCEEEEEeC-----CCcEEEEeCcc------CCCcce
Q 023772 84 ---------IFYWDVSTGRV----IRKFRGHESEVNAVKFNEYSSVVVSAGY-----DQSLRAWDCRS------HSTEPI 139 (277)
Q Consensus 84 ---------v~~wd~~~~~~----~~~~~~h~~~v~~i~~~~~~~~l~s~~~-----d~~i~iwd~~~------~~~~~~ 139 (277)
|++|++.+++. +.....|...+.++.++|+++.|+.++. +..|.+||+.. ......
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 99999988762 2222335556788999999999887765 56899999875 321222
Q ss_pred EeeccccCcEEEEEecCCeEEEeecC----CcEEEEEccCCc-----ccccCCC-CCeeEEEEeCCCCEEEEEecCCe--
Q 023772 140 QIIDSFQDSVMSVCLTKTEIIGGSVD----GTVRTFDIRVGR-----ELSDDLG-QPVNCISMSNDGNCILASCLDST-- 207 (277)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~g~~d----~~i~i~d~~~~~-----~~~~~~~-~~v~~~~~s~~~~~l~~~~~d~~-- 207 (277)
............+..++..++..+.. ..|.+||+..+. .+..... ..+..++|++++.++++...|+.
T Consensus 281 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 281 KLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred EeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 22222222233455566666554432 369999987653 1222222 35778899977777888888884
Q ss_pred EEEEECCCCceEEEEeccccceeeeeeEecCCCceEE-e---ecCCCeEEEEECcCcc
Q 023772 208 LRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT-G---GSEDGYIYFWDLVDAS 261 (277)
Q Consensus 208 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s---gs~d~~i~iwd~~~~~ 261 (277)
|++||+.+++.++.+..+. .......+++++..++ + ....+.|+.||+.+++
T Consensus 361 l~~~~~~~g~~~~~l~~~~--~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPLEV--GSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEEEECCCS--SEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEEecCCCC--ceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5667877787777776652 2334455677776554 2 3456899999999887
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=8.1e-18 Score=139.70 Aligned_cols=245 Identities=11% Similarity=0.090 Sum_probs=171.0
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEe----------CCCcEEEEcCCCCeeEEEEecc------CccEEEEEEcCCCCEEEE
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCG----------KDRTIRLWNPHRGIHIKTYKSH------GREVRDVHVTADNSKLIS 77 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~t 77 (277)
+..+..+ .++|+|||++++.++ .+++|.+||..+++.+.++... ......++++|++++|++
T Consensus 47 i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v 124 (361)
T 2oiz_A 47 VPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVL 124 (361)
T ss_dssp EECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEE
T ss_pred ecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEE
Confidence 4445555 899999999999886 3678999999998888887643 345678999999999998
Q ss_pred EeC--CCcEEEEECCCCceeEE-eecccCceeEEEEecCC-CEEEEEeCCCcEEEEeCccCCCcc-e----EeeccccCc
Q 023772 78 CGG--DRQIFYWDVSTGRVIRK-FRGHESEVNAVKFNEYS-SVVVSAGYDQSLRAWDCRSHSTEP-I----QIIDSFQDS 148 (277)
Q Consensus 78 ~s~--d~~v~~wd~~~~~~~~~-~~~h~~~v~~i~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~-~----~~~~~~~~~ 148 (277)
+.. +++|.+||+++++.+.+ +.. .. ...+.+.|++ ..+++.+.||.+.+|+........ . ..+.....+
T Consensus 125 ~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~ 202 (361)
T 2oiz_A 125 QNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP 202 (361)
T ss_dssp EEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC
T ss_pred ECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc
Confidence 863 68999999999988877 542 22 2234566654 677888899999999875421111 0 011111111
Q ss_pred E-EEEEecCCeEEEeecCCcEEEEEccCCccc-----cc------CC---CCCeeEEEEeCCCCEEEEEec---------
Q 023772 149 V-MSVCLTKTEIIGGSVDGTVRTFDIRVGREL-----SD------DL---GQPVNCISMSNDGNCILASCL--------- 204 (277)
Q Consensus 149 ~-~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~-----~~------~~---~~~v~~~~~s~~~~~l~~~~~--------- 204 (277)
+ .....++..++..+.++.+.++|+...... .. .. ......++|+|+++.++++..
T Consensus 203 ~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~ 282 (361)
T 2oiz_A 203 IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHK 282 (361)
T ss_dssp BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTT
T ss_pred eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccccc
Confidence 1 011223445566667888999998643211 00 00 011223789999888776543
Q ss_pred --CCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCc--cceeeec
Q 023772 205 --DSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA--SVVAKFK 267 (277)
Q Consensus 205 --d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~--~~~~~~~ 267 (277)
.+.|.+||..+++.+..+..+. ...+.++|++++|+++.. +.|.+||..++ ++++++.
T Consensus 283 ~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~ 344 (361)
T 2oiz_A 283 FPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE 344 (361)
T ss_dssp CCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET
T ss_pred CCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec
Confidence 3489999999999999988764 456678999999998876 99999999999 9998874
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=7.2e-19 Score=154.95 Aligned_cols=204 Identities=13% Similarity=0.074 Sum_probs=147.4
Q ss_pred CccEEEEEEcCCCCEEEEEeC-CCcEEEEECCCCceeEEeeccc-CceeEEEEecCCCEEEEEeC---CCcEEEEeCcc-
Q 023772 60 GREVRDVHVTADNSKLISCGG-DRQIFYWDVSTGRVIRKFRGHE-SEVNAVKFNEYSSVVVSAGY---DQSLRAWDCRS- 133 (277)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~s~-d~~v~~wd~~~~~~~~~~~~h~-~~v~~i~~~~~~~~l~s~~~---d~~i~iwd~~~- 133 (277)
..+|.++.|+||+++|+.++. |+++++|++++++..+ +..|. ..+.++.|+|+ +++++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 457999999999999999887 9999999997666544 44454 68999999999 78887775 55667766543
Q ss_pred -CCCcceEeeccccCcEEEEEecCCe-EEEeecCCcEEEEEccCCcccccCCCCCeeEEEEeCCCCEEEEEecC----Ce
Q 023772 134 -HSTEPIQIIDSFQDSVMSVCLTKTE-IIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLD----ST 207 (277)
Q Consensus 134 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~d~~i~i~d~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~ 207 (277)
.... ..........+.++.++++. +++.+.++.+.+||+.+++......... .+++|||||++|++++.| +.
T Consensus 99 ~~g~~-~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 99 RPGEE-QRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp STTCC-EECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEE
T ss_pred CCCcc-ccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeE
Confidence 2222 22222222335567777765 3344445556699998775432211112 789999999999988877 78
Q ss_pred EEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCC--eEEEEECcCccceeeeccCcc
Q 023772 208 LRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDG--YIYFWDLVDASVVAKFKAHSL 271 (277)
Q Consensus 208 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~--~i~iwd~~~~~~~~~~~~h~~ 271 (277)
|++||+.+++.. .+..+.. .....+++|||++|+++..|+ .|++||+.+++.. .+.+|..
T Consensus 177 i~~~d~~~g~~~-~l~~~~~--~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~ 238 (582)
T 3o4h_A 177 LFTSNLSSGGLR-VFDSGEG--SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK 238 (582)
T ss_dssp EEEEETTTCCCE-EECCSSC--EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS
T ss_pred EEEEcCCCCCce-EeecCCC--ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc
Confidence 999999888765 5565543 346678999999999888898 8999999999887 7777754
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.80 E-value=7.2e-18 Score=138.58 Aligned_cols=197 Identities=12% Similarity=0.136 Sum_probs=142.8
Q ss_pred cEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCeeEEEEeccC------ccEEEEEEcCCCCEEEEEeCC-----------
Q 023772 20 AVLAARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHG------REVRDVHVTADNSKLISCGGD----------- 81 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l~t~s~d----------- 81 (277)
.+..++|+|+|++++ +.+.++.|.+||+.+++....+..+. ..+..++|+|+++++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 577899999998665 56678999999999998887776432 237899999999999988865
Q ss_pred -CcEEEEECCCCce---eEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeecccc-----------
Q 023772 82 -RQIFYWDVSTGRV---IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQ----------- 146 (277)
Q Consensus 82 -~~v~~wd~~~~~~---~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----------- 146 (277)
+.|.+||+++++. +..+. +...+.+++|+|+++ ++.++ +.|.+||+.+..... .+....
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~ 197 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTV--ALPLRNWNRKGYSAPDV 197 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEE--EECSTTCCCTTBCCCBC
T ss_pred CCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceec--cccccccCCccccCccc
Confidence 8999999988543 33443 344688899999999 55554 349999986543211 111000
Q ss_pred ---------------------------------------------------------CcEEEEEe---cCCeEEEeecCC
Q 023772 147 ---------------------------------------------------------DSVMSVCL---TKTEIIGGSVDG 166 (277)
Q Consensus 147 ---------------------------------------------------------~~~~~~~~---~~~~~~~g~~d~ 166 (277)
.....+.+ ++..++++ ++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~ 275 (349)
T 1jmx_B 198 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LN 275 (349)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ES
T ss_pred eeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cC
Confidence 01122222 33446655 88
Q ss_pred cEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEec
Q 023772 167 TVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG 224 (277)
Q Consensus 167 ~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 224 (277)
.|.+||+.+++.+.. ..+..+.+++|+|+|++|++++.++.|++||..+++.+..+..
T Consensus 276 ~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 276 RLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence 999999988765432 2345678999999999888888899999999999988877653
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.80 E-value=2.3e-16 Score=127.16 Aligned_cols=244 Identities=8% Similarity=-0.001 Sum_probs=170.5
Q ss_pred ccceeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 10 EANVLKGHEGAVLAARFNGDGN-YCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 10 ~~~~l~~H~~~V~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
....+..+.....+++|+++|+ +++++..++.|..||..++ ...+..+...+.+++++++++.+++...++.|.+||
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 3455666777789999999998 7788888999999999877 667777788899999999999888877788999999
Q ss_pred CCCCceeEEeecc----cCceeEEEEecCCCEEEEEeC-----------------CCcEEEEeCccCCCcceEeeccccC
Q 023772 89 VSTGRVIRKFRGH----ESEVNAVKFNEYSSVVVSAGY-----------------DQSLRAWDCRSHSTEPIQIIDSFQD 147 (277)
Q Consensus 89 ~~~~~~~~~~~~h----~~~v~~i~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~ 147 (277)
..+++........ ...++.+++.++++++++.+. .+.|..++.. . ..........
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g---~~~~~~~~~~ 172 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G---TLSAPIRDRV 172 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S---CEEEEECCCS
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C---CEEEeecCCC
Confidence 9887754332211 234677999999999887431 2355555543 2 1222223333
Q ss_pred cEEEEEecC--CeEEEeecCCcEEEEEcc-CCcc-----cccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceE
Q 023772 148 SVMSVCLTK--TEIIGGSVDGTVRTFDIR-VGRE-----LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELL 219 (277)
Q Consensus 148 ~~~~~~~~~--~~~~~g~~d~~i~i~d~~-~~~~-----~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~ 219 (277)
....+.+++ ..+++.+.++.|.+||+. .++. ........+..++++++|+++++. ++.|++||.. ++.+
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 445566654 446667778899999986 2221 112223456789999999866665 8899999997 7777
Q ss_pred EEEeccccceeeeeeEe-cCCCceEEeecCCCeEEEEECcCccceeee
Q 023772 220 QEYKGHICKSFKTDCCL-TNSDAHVTGGSEDGYIYFWDLVDASVVAKF 266 (277)
Q Consensus 220 ~~~~~~~~~~~~~~~~~-~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~ 266 (277)
..+..+.. ...+++ +++++.|..++.+ .+.-++.++.++.+..
T Consensus 250 ~~~~~~~~---~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~~~~ 293 (296)
T 3e5z_A 250 GRVLTPQT---TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLEHHH 293 (296)
T ss_dssp EEEECSSC---CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCCC--
T ss_pred EEEECCCC---ceeEEEECCCCCEEEEEcCC-eEEEEEcccccccccc
Confidence 77776543 455667 5788888877765 4666777777665544
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=2.1e-17 Score=147.65 Aligned_cols=259 Identities=11% Similarity=0.018 Sum_probs=176.0
Q ss_pred ceeeccCCcEEEEEEeCCCCEEEEE--eCCCcEEEEcCCCCeeEEEEeccCccEE---------EEEEc--CCCCE-EEE
Q 023772 12 NVLKGHEGAVLAARFNGDGNYCLSC--GKDRTIRLWNPHRGIHIKTYKSHGREVR---------DVHVT--ADNSK-LIS 77 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~~~l~s~--s~d~~v~iwd~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-l~t 77 (277)
..+.+|...|..++|++++-++++. +.++..+||....+...+.+..|...+. ...|+ |++++ |+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 4567899999999999887777777 6688999998654555666666666666 66665 99998 765
Q ss_pred EeC-CCcEEEEECC--C-CceeEEeec-----ccCceeEEEEecCCCEEEEEeCC----------CcEEEEeCccCC---
Q 023772 78 CGG-DRQIFYWDVS--T-GRVIRKFRG-----HESEVNAVKFNEYSSVVVSAGYD----------QSLRAWDCRSHS--- 135 (277)
Q Consensus 78 ~s~-d~~v~~wd~~--~-~~~~~~~~~-----h~~~v~~i~~~~~~~~l~s~~~d----------~~i~iwd~~~~~--- 135 (277)
++. +..|.++++. + ++ ...+.. |...+.+++|+|+++.|+.++.| .+|++||+....
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 554 5667777765 2 43 444554 66788899999999999998887 589999987610
Q ss_pred -CcceEeec-cccCcEEEEEec--CCeEEEeecC--------CcEEEEEcc-CC---cc--cccCCCCCeeEEEEeCCCC
Q 023772 136 -TEPIQIID-SFQDSVMSVCLT--KTEIIGGSVD--------GTVRTFDIR-VG---RE--LSDDLGQPVNCISMSNDGN 197 (277)
Q Consensus 136 -~~~~~~~~-~~~~~~~~~~~~--~~~~~~g~~d--------~~i~i~d~~-~~---~~--~~~~~~~~v~~~~~s~~~~ 197 (277)
.... .+. .....+..+.++ ++.++.++.+ ..|.+||+. ++ +. +.......+..+.|+|+|+
T Consensus 176 ~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 176 RSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp GGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC
T ss_pred CCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe
Confidence 1122 222 333344444444 4557766655 379999998 45 22 2222346788999999999
Q ss_pred EEEEEecCC--eEEEEECCCCceEEEEeccccce---e---eeeeEecCCCceEEeecCCCeEEEE--ECcCccceeeec
Q 023772 198 CILASCLDS--TLRLLDRSTGELLQEYKGHICKS---F---KTDCCLTNSDAHVTGGSEDGYIYFW--DLVDASVVAKFK 267 (277)
Q Consensus 198 ~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~l~sgs~d~~i~iw--d~~~~~~~~~~~ 267 (277)
+++++..++ .|++||..+++......++.... + ....++++++.++++++. +.+++| |...++ ++.+.
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~ 332 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA 332 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec
Confidence 878888888 67777776776544333321110 0 234567788999999988 999999 555554 67777
Q ss_pred cCcceeE
Q 023772 268 AHSLVVK 274 (277)
Q Consensus 268 ~h~~~v~ 274 (277)
.|...+.
T Consensus 333 ~~~~~~~ 339 (662)
T 3azo_A 333 GPWTEWA 339 (662)
T ss_dssp SSCCEEE
T ss_pred CCCCeEE
Confidence 7765543
No 168
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.77 E-value=5.2e-16 Score=123.93 Aligned_cols=237 Identities=11% Similarity=0.079 Sum_probs=171.2
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccC-ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecc-cCce
Q 023772 28 GDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHG-REVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGH-ESEV 105 (277)
Q Consensus 28 ~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h-~~~v 105 (277)
..+++|++++.|+.|.+||.++|+.+.++..+. ..++++.+.|+++.++ +.++.|..||. +++.+.++..+ ...+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 356899999999999999999999999998776 4789999999999888 45788999999 89999988875 3578
Q ss_pred eEEEEecCCCEEEEEeC-CCcEEEEeCccCCCcceEeecc-----c-cCcEEEEEecCCeEEEeecCCcEEEEEccCCcc
Q 023772 106 NAVKFNEYSSVVVSAGY-DQSLRAWDCRSHSTEPIQIIDS-----F-QDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRE 178 (277)
Q Consensus 106 ~~i~~~~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~ 178 (277)
.++.+.++++++++.+. ++.+..+|.. +.......+.. + .........+++.+++...++.|..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 88999999999999887 7778777753 22111111110 0 01112334456678888889999999987 665
Q ss_pred ccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccc----eeeeeeEecCCCceEEeec--CC--
Q 023772 179 LSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK----SFKTDCCLTNSDAHVTGGS--ED-- 249 (277)
Q Consensus 179 ~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~sgs--~d-- 249 (277)
+.. .....+.++.+.++|+.+++++.++.|..+|..+|+.+..+...... .........++|..+++.+ ..
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~ 237 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDRE 237 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTT
T ss_pred EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCcccc
Confidence 433 22345667788999999999888889999999999999998754211 2234445567888777763 11
Q ss_pred ----CeEEEEEC-cCccceeeeccC
Q 023772 250 ----GYIYFWDL-VDASVVAKFKAH 269 (277)
Q Consensus 250 ----~~i~iwd~-~~~~~~~~~~~h 269 (277)
+..+++++ .+++++=++..+
T Consensus 238 ~~~~~~~~~~~~~~~g~~~W~~~~~ 262 (276)
T 3no2_A 238 AGKGKHPQLVEIDSEGKVVWQLNDK 262 (276)
T ss_dssp GGGSCCCSEEEECTTSBEEEEECCT
T ss_pred ccccCCceEEEECCCCCEEEEecCc
Confidence 23355555 567777666544
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=4e-16 Score=128.38 Aligned_cols=233 Identities=12% Similarity=0.089 Sum_probs=155.3
Q ss_pred CcEEEEEEeCCCCEEEEEeCC---C--cEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCC------------
Q 023772 19 GAVLAARFNGDGNYCLSCGKD---R--TIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGD------------ 81 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d---~--~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d------------ 81 (277)
..+..+.|+|||++|+.++.+ + .|.+||+.+++.......+ . +..+.|+|+++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 457789999999999987654 2 3777888888766555443 4 9999999999998887642
Q ss_pred ---------------CcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCC-------cEEEEeCccCCCcce
Q 023772 82 ---------------RQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-------SLRAWDCRSHSTEPI 139 (277)
Q Consensus 82 ---------------~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~-------~i~iwd~~~~~~~~~ 139 (277)
..|.+||+.+++.+..+.. . .+..+.|+|++ +++++..++ ...+|.+... +..
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~--~~~ 211 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG--KEE 211 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT--EEE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC--ceE
Confidence 5799999998887455554 4 78889999999 888776542 4455554422 222
Q ss_pred EeeccccCcEEEEEecCCeEEEeecC--------CcEEEEEccCCcc--cccCCCCCeeE-EEEeCCCCEEEEEecCCeE
Q 023772 140 QIIDSFQDSVMSVCLTKTEIIGGSVD--------GTVRTFDIRVGRE--LSDDLGQPVNC-ISMSNDGNCILASCLDSTL 208 (277)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~g~~d--------~~i~i~d~~~~~~--~~~~~~~~v~~-~~~s~~~~~l~~~~~d~~i 208 (277)
.... . ..+..+.++++.++.++.+ ..|.+|| .++. +.......+.. +.|+ ++ .+++++.++.+
T Consensus 212 ~l~~-~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~ 285 (347)
T 2gop_A 212 KMFE-K-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSV 285 (347)
T ss_dssp EEEE-E-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEE
T ss_pred Eecc-C-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcE
Confidence 2222 2 3344446667777766544 3677788 3332 22223456775 8999 88 88899999999
Q ss_pred EEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeE-EEEECcCccceeeeccCcce
Q 023772 209 RLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI-YFWDLVDASVVAKFKAHSLV 272 (277)
Q Consensus 209 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i-~iwd~~~~~~~~~~~~h~~~ 272 (277)
+|| +.+++...... +. .......+++ .++++++.++.. ++|.+. ++ ..++..|...
T Consensus 286 ~l~-~~~g~~~~~~~-~~--~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 286 NLY-IWDGEIKPIAK-GR--HWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp EEE-EESSSEEEEEC-SS--SEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred EEE-EcCCceEEEec-CC--CeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 999 87666543333 32 2334456777 566666666654 777776 54 5667777643
No 170
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=1.1e-15 Score=126.59 Aligned_cols=220 Identities=11% Similarity=0.118 Sum_probs=143.0
Q ss_pred eCCCcEEEEcC--CCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCC----CcEEEEECCC--Cc--eeEEeecccCcee
Q 023772 37 GKDRTIRLWNP--HRGIHIKTYKSHGREVRDVHVTADNSKLISCGGD----RQIFYWDVST--GR--VIRKFRGHESEVN 106 (277)
Q Consensus 37 s~d~~v~iwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d----~~v~~wd~~~--~~--~~~~~~~h~~~v~ 106 (277)
+.++.|.+|++ .+++.......+...+..++|+|++++|++++.+ +.+.+|++.. ++ .+.....+.....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred CCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 45678999865 5565433222267788899999999999999876 7999998865 43 3334444555666
Q ss_pred EEEEecCCCEEEEEe-CCCcEEEEeCccCCC-cceEe---ecc--------ccCcEEEEEecC--CeEEE-eecCCcEEE
Q 023772 107 AVKFNEYSSVVVSAG-YDQSLRAWDCRSHST-EPIQI---IDS--------FQDSVMSVCLTK--TEIIG-GSVDGTVRT 170 (277)
Q Consensus 107 ~i~~~~~~~~l~s~~-~d~~i~iwd~~~~~~-~~~~~---~~~--------~~~~~~~~~~~~--~~~~~-g~~d~~i~i 170 (277)
.+++ +++++++++ .++.+.+|++..... ..... ... ....+..+.+++ +.+++ ...++.+.+
T Consensus 104 ~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v 181 (361)
T 3scy_A 104 YLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHK 181 (361)
T ss_dssp EEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEE
Confidence 6777 777776666 688999999864321 11110 000 011234455554 44544 445789999
Q ss_pred EEccCCcc------c---------ccCCCCCeeEEEEeCCCCEEEEEe-cCCeEEEEECCCCce--EEEEecccc-ceee
Q 023772 171 FDIRVGRE------L---------SDDLGQPVNCISMSNDGNCILASC-LDSTLRLLDRSTGEL--LQEYKGHIC-KSFK 231 (277)
Q Consensus 171 ~d~~~~~~------~---------~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~wd~~~~~~--~~~~~~~~~-~~~~ 231 (277)
|++..... + .......+..++|+|+|+++++++ .++.|++||+.++++ +..+..... ....
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 182 FNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS 261 (361)
T ss_dssp EEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE
T ss_pred EEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc
Confidence 98874331 1 122345678999999999887776 689999999987754 233322111 1123
Q ss_pred eeeEecCCCceEEeecC--CCeEEEEECc
Q 023772 232 TDCCLTNSDAHVTGGSE--DGYIYFWDLV 258 (277)
Q Consensus 232 ~~~~~~~~~~~l~sgs~--d~~i~iwd~~ 258 (277)
..++++|++++|+++.. ++.|.+|++.
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 45779999998866554 5899999996
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=7.1e-17 Score=145.16 Aligned_cols=245 Identities=9% Similarity=-0.036 Sum_probs=162.2
Q ss_pred ccCCcEEEEEEeCCCCEEE-----EEeCCCcEEEEcCCCCeeEEEEeccCccE--EEEEEcCCCCEEEEEeCCCc-----
Q 023772 16 GHEGAVLAARFNGDGNYCL-----SCGKDRTIRLWNPHRGIHIKTYKSHGREV--RDVHVTADNSKLISCGGDRQ----- 83 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~-----s~s~d~~v~iwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~t~s~d~~----- 83 (277)
+|...+..++|||||++|+ +|+.+.+|++||+.+++.+. ..+-..+ ..++|+|+++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 5666799999999999999 55566799999999987541 1121222 68999999999999988776
Q ss_pred --------EEEEECCCCc----eeEEeecccCceeEEEEecCCCEEEEEeCCC----cEEEEeCccCCCcceEeeccccC
Q 023772 84 --------IFYWDVSTGR----VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ----SLRAWDCRSHSTEPIQIIDSFQD 147 (277)
Q Consensus 84 --------v~~wd~~~~~----~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~~~ 147 (277)
|++|++.+++ ++.....|...+.++.++|++++++.++.++ .|.+|+..... ..........
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~--~~~l~~~~~~ 273 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD--FRLLVKGVGA 273 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS--CEEEEECSSC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc--eEEeecCCCc
Confidence 9999998876 3434445666788999999999988887766 66666653322 2222222222
Q ss_pred cEEEEEecCCeEEEeec----CCcEEEEEccCCcc-----cccCC-CCCeeEEEEeCCCCEEEEEecCCeEEEEECC-CC
Q 023772 148 SVMSVCLTKTEIIGGSV----DGTVRTFDIRVGRE-----LSDDL-GQPVNCISMSNDGNCILASCLDSTLRLLDRS-TG 216 (277)
Q Consensus 148 ~~~~~~~~~~~~~~g~~----d~~i~i~d~~~~~~-----~~~~~-~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~-~~ 216 (277)
....+..++. ++..+. ++.|.+||+..+.. +.... ...+..++|+ ++..+++...|+..+||.+. .+
T Consensus 274 ~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 274 KYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp CEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred eEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 2222223444 544433 57899999876542 21122 3457788888 66778888899988888654 35
Q ss_pred ceEEEEeccccceeeeeeEecCCCceEE----eecCCCeEEEEECcCccceeeecc
Q 023772 217 ELLQEYKGHICKSFKTDCCLTNSDAHVT----GGSEDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~----sgs~d~~i~iwd~~~~~~~~~~~~ 268 (277)
+..+.+..+. ........+++++..++ +....++|++||+.+++. ..++.
T Consensus 352 ~~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~-~~l~~ 405 (695)
T 2bkl_A 352 KPVRTVQLPG-VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS-ELWAK 405 (695)
T ss_dssp CEEEECCCSS-SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE-EEEEE
T ss_pred CeeEEecCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEEec
Confidence 5555554331 12233345677777666 344568899999988763 34443
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=1.3e-17 Score=139.57 Aligned_cols=240 Identities=13% Similarity=0.046 Sum_probs=155.5
Q ss_pred EEEEEEeCCCCEEEEEeCC---CcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEE
Q 023772 21 VLAARFNGDGNYCLSCGKD---RTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRK 97 (277)
Q Consensus 21 V~~~~~~~~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~ 97 (277)
+..++|+|||++|+..+.+ ..|.+||+.+++.......+........|+|++++|+.++.++.+.+||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 6778999999998876443 3688889888876544433332233478999999999999999999999998876655
Q ss_pred eecccCceeE-------------------EEEecCCCEEEEE-----eCCCcEEEEeCccCCCcceEeeccccCcEEEEE
Q 023772 98 FRGHESEVNA-------------------VKFNEYSSVVVSA-----GYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVC 153 (277)
Q Consensus 98 ~~~h~~~v~~-------------------i~~~~~~~~l~s~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 153 (277)
+..+...... +.++|+++.++.. ..+..|.+||+....... .. .....+..+.
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~--~~-~~~~~~~~~~ 194 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV--IH-QDTAWLGHPI 194 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE--EE-EESSCEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe--ec-cCCcccccce
Confidence 5444332222 2345666655443 356789999987643222 22 3344555666
Q ss_pred ecC---CeEEEeecC------CcEEEEEccCCccccc-CC--CCCeeEEEEeCCCCEEEEEecC-----CeEEEEECCCC
Q 023772 154 LTK---TEIIGGSVD------GTVRTFDIRVGRELSD-DL--GQPVNCISMSNDGNCILASCLD-----STLRLLDRSTG 216 (277)
Q Consensus 154 ~~~---~~~~~g~~d------~~i~i~d~~~~~~~~~-~~--~~~v~~~~~s~~~~~l~~~~~d-----~~i~~wd~~~~ 216 (277)
+++ ..++..+.+ ..|.+||+..++.... .. ...+..+.|+|+|++|+.++.+ +.|++||+.++
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 665 235544333 3688888865432211 11 2257788999999988777554 45999999887
Q ss_pred ceEEEEeccccceeeeeeEecC-CCceEEeec----------------CCCeEEEEECcCccceeeeccC
Q 023772 217 ELLQEYKGHICKSFKTDCCLTN-SDAHVTGGS----------------EDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sgs----------------~d~~i~iwd~~~~~~~~~~~~h 269 (277)
+........ ... ..++| ++++++.++ .++.|++||+.+++. ..+..|
T Consensus 275 ~~~~l~~~~---~~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~ 338 (396)
T 3c5m_A 275 ENEEVMVMP---PCS--HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKH 338 (396)
T ss_dssp CEEEEEECC---SEE--EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEEC
T ss_pred CeEEeeeCC---CCC--CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCC
Confidence 654332211 111 56788 999887654 347899999988765 345444
No 173
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=1e-17 Score=151.12 Aligned_cols=232 Identities=10% Similarity=0.067 Sum_probs=152.2
Q ss_pred cEEEEEEeCCCCEEEEEeC---------CCcEEEEcCCCCeeE--EEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 20 AVLAARFNGDGNYCLSCGK---------DRTIRLWNPHRGIHI--KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~s~---------d~~v~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
.|.+++|||||++|++++. |+.|++||+.+++.+ ..+ ...+..++|+|++++|+.++ |+.|++||
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~ 136 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQ 136 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEES
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEe
Confidence 3899999999999998876 799999999988762 122 25688999999999999886 78999999
Q ss_pred CCCCceeEEe-ecccCce-----------------eEEEEecCCCEEEEEeCCC--------------------------
Q 023772 89 VSTGRVIRKF-RGHESEV-----------------NAVKFNEYSSVVVSAGYDQ-------------------------- 124 (277)
Q Consensus 89 ~~~~~~~~~~-~~h~~~v-----------------~~i~~~~~~~~l~s~~~d~-------------------------- 124 (277)
+.+++..+.. .++...| .++.|+||++.|++++.|.
T Consensus 137 ~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 137 RPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp STTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 9888765422 2333222 4799999999999988663
Q ss_pred --------cEEEEeCccCCCc-ceEe-----eccccCcEEEEEecCCe--EEEeecC----CcEEEEE----ccCCcccc
Q 023772 125 --------SLRAWDCRSHSTE-PIQI-----IDSFQDSVMSVCLTKTE--IIGGSVD----GTVRTFD----IRVGRELS 180 (277)
Q Consensus 125 --------~i~iwd~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~--~~~g~~d----~~i~i~d----~~~~~~~~ 180 (277)
+|++||+...... .... +..+...+..+.++++. +++.... ..|.+|| ..+++...
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 7889998754321 0111 12345556777777654 3332222 2488899 76654322
Q ss_pred c------CCCCCee-----EEEEeCCCCEEEE--EecCC--eEEEEECCCCceEEEEeccccceeeeeeEecCCCceEE-
Q 023772 181 D------DLGQPVN-----CISMSNDGNCILA--SCLDS--TLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT- 244 (277)
Q Consensus 181 ~------~~~~~v~-----~~~~s~~~~~l~~--~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 244 (277)
. .+...+. .+.|+|+|+.|+. +..++ .|++||+.+++. ..+..+... .....++ +++.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt~~~~~--v~~~~~~-d~~~i~~ 372 (719)
T 1z68_A 297 TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQITSGKWE--AINIFRV-TQDSLFY 372 (719)
T ss_dssp GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECSCSSSC--EEEEEEE-CSSEEEE
T ss_pred EEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-EecccCceE--EEEEEEE-eCCEEEE
Confidence 2 2233344 7899999986544 44555 577788877663 444433211 1223344 565555
Q ss_pred eecC----CCeEEEEECcC
Q 023772 245 GGSE----DGYIYFWDLVD 259 (277)
Q Consensus 245 sgs~----d~~i~iwd~~~ 259 (277)
++.. ++..++|.+..
T Consensus 373 ~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 373 SSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EESCGGGCTTCBEEEEEEC
T ss_pred EEecCCCCCceEEEEEEeC
Confidence 4444 48888998764
No 174
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=1e-15 Score=121.49 Aligned_cols=239 Identities=5% Similarity=-0.054 Sum_probs=161.0
Q ss_pred cEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 023772 20 AVLAARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF 98 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~ 98 (277)
...+++++++|++.+ +.+.++.|.+||..++........+...+.++++.++++.+++.. ++.|..||....... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 678899999999777 557889999999766543222223335688999999988766666 889999998765433 33
Q ss_pred e-cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEec--CCeEEEeecCCcEEEEEccC
Q 023772 99 R-GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEIIGGSVDGTVRTFDIRV 175 (277)
Q Consensus 99 ~-~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~d~~i~i~d~~~ 175 (277)
. .....+.++++.++++++++...++.|.+|+...... .............+.++ +..+++...++.|.+||...
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC--EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee--EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 2 2335688999999999888888889999997643221 11111111123334444 34345555678999999876
Q ss_pred CcccccC--CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEE
Q 023772 176 GRELSDD--LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253 (277)
Q Consensus 176 ~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~ 253 (277)
....... ....+..++++++|..+++...++.|++||............+ ......+++.+++++.++.+.++.|+
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG--LNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCS--CSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCC--CCCceeEEECCCCCEEEEECCCCEEE
Confidence 5433221 1256889999999987777777889999999765433221111 12345567888898888888999999
Q ss_pred EEECcCcccee
Q 023772 254 FWDLVDASVVA 264 (277)
Q Consensus 254 iwd~~~~~~~~ 264 (277)
+++....+..+
T Consensus 259 ~~~~~~~~~~~ 269 (270)
T 1rwi_B 259 KLTSLEHHHHH 269 (270)
T ss_dssp EECCCGGGSCC
T ss_pred EEcCCCccccC
Confidence 99998776543
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=1.9e-14 Score=117.72 Aligned_cols=233 Identities=10% Similarity=0.046 Sum_probs=159.9
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCC----CcEEEEE
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGD----RQIFYWD 88 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d----~~v~~wd 88 (277)
.+..+...+.+++|+++|++++++..++.|.+||..+++.......+...+.+++++++++++++...+ +.|.+||
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 455666778999999999988888899999999998887665554566789999999999888877666 6899999
Q ss_pred CCCCceeEEee--cccCceeEEEEecCCCEEEEEeC------CCcEEEEeCccCCCcceEeeccccCcEEEEEecCC--e
Q 023772 89 VSTGRVIRKFR--GHESEVNAVKFNEYSSVVVSAGY------DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--E 158 (277)
Q Consensus 89 ~~~~~~~~~~~--~h~~~v~~i~~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 158 (277)
.++++....+. .+...++.+.+.++++++++... .+.|..+|...... ..+.........+.++++ .
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV---TPIIQNISVANGIALSTDEKV 195 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE---EEEEEEESSEEEEEECTTSSE
T ss_pred CCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE---EEeecCCCcccceEECCCCCE
Confidence 98876543332 24457899999999988887654 24566666543222 111111223455666554 3
Q ss_pred EE-EeecCCcEEEEEccC-Ccccc-------cCCC--CCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEecccc
Q 023772 159 II-GGSVDGTVRTFDIRV-GRELS-------DDLG--QPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHIC 227 (277)
Q Consensus 159 ~~-~g~~d~~i~i~d~~~-~~~~~-------~~~~--~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 227 (277)
++ +...++.|.+||+.. +..+. .... ..+..++++++|+++++...++.|++||. .++.+..+.....
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~ 274 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGR 274 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTG
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCC
Confidence 44 445678999999863 22111 0111 35778999999998888878899999998 4677777654321
Q ss_pred ----ceeeeeeEecCCCceEEeecCC
Q 023772 228 ----KSFKTDCCLTNSDAHVTGGSED 249 (277)
Q Consensus 228 ----~~~~~~~~~~~~~~~l~sgs~d 249 (277)
......+++++++..|..++.+
T Consensus 275 ~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 275 DEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp GGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ccccccCcceEEECCCCCEEEEEeCc
Confidence 0134556778887666544443
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=3.9e-16 Score=127.85 Aligned_cols=247 Identities=12% Similarity=0.092 Sum_probs=168.3
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF 98 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~ 98 (277)
..|.++.|++++..+++.+.++.++.| .+.....+..+...+.+++|+++++.++++..++.|.+||.++++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 446778899988888888889999999 45566677777778899999999998888888999999999888766544
Q ss_pred ecccCceeEEEEecCCCEEEEEeCC----CcEEEEeCccCCCcceEeeccccCcEEEEEecCCe-EEEeec-------CC
Q 023772 99 RGHESEVNAVKFNEYSSVVVSAGYD----QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-IIGGSV-------DG 166 (277)
Q Consensus 99 ~~h~~~v~~i~~~~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~-------d~ 166 (277)
..+...+.++.++++++++++...+ +.|.+||..................+..+.++++. ++.+.. .+
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 4567789999999999988887766 68999998754332111101123345666666543 444433 24
Q ss_pred cEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEE-EEecCCeEEEEECCC-CceEEEEe-----ccccceeeeeeEecC
Q 023772 167 TVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCIL-ASCLDSTLRLLDRST-GELLQEYK-----GHICKSFKTDCCLTN 238 (277)
Q Consensus 167 ~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~-~~~~d~~i~~wd~~~-~~~~~~~~-----~~~~~~~~~~~~~~~ 238 (277)
.|..+|...++.... .....++.++|+|+|++|+ +.+.++.|++||..+ +..+..+. ...........++.+
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~ 242 (333)
T 2dg1_A 163 GVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS 242 (333)
T ss_dssp EEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT
T ss_pred eEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECC
Confidence 555566544322111 1123578899999998654 445678999999964 33332221 000011334467788
Q ss_pred CCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 239 SDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 239 ~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
++++.++...++.|++||. +++.+..+..+
T Consensus 243 ~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 243 DDNLYVAMYGQGRVLVFNK-RGYPIGQILIP 272 (333)
T ss_dssp TCCEEEEEETTTEEEEECT-TSCEEEEEECT
T ss_pred CCCEEEEEcCCCEEEEECC-CCCEEEEEEcC
Confidence 8888787777889999998 56666666543
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=6.7e-17 Score=135.02 Aligned_cols=240 Identities=11% Similarity=0.042 Sum_probs=156.1
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEE--EcCCCCEEEEE-------------
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVH--VTADNSKLISC------------- 78 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~--~~~~~~~l~t~------------- 78 (277)
+.+|...+....|+|||+.|+.++.++.+++||+.+++....+..+...+.... +++++.+++..
T Consensus 76 t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccccc
Confidence 345655665778999999999999999999999999988777776666565444 48898888742
Q ss_pred ---------eCCCcEEEEECCCCceeEEeecccCceeEEEEec-CCCEEEEEeCC------CcEEEEeCccCCCcceEee
Q 023772 79 ---------GGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNE-YSSVVVSAGYD------QSLRAWDCRSHSTEPIQII 142 (277)
Q Consensus 79 ---------s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~-~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~ 142 (277)
+.+..|.+||+.+++.. .+..+...+..+.|+| +++.|+.++.+ ..|.++|...... ....
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~ 232 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM--RKVK 232 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC--EESC
T ss_pred chhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce--EEee
Confidence 24578999999988754 4445677889999999 99988877754 3677777654322 2222
Q ss_pred cccc-CcEEEEEecC--CeEEEeec-CC----cEEEEEccCCccccc-CCCC------CeeEEEEeCCCCEEEEE-----
Q 023772 143 DSFQ-DSVMSVCLTK--TEIIGGSV-DG----TVRTFDIRVGRELSD-DLGQ------PVNCISMSNDGNCILAS----- 202 (277)
Q Consensus 143 ~~~~-~~~~~~~~~~--~~~~~g~~-d~----~i~i~d~~~~~~~~~-~~~~------~v~~~~~s~~~~~l~~~----- 202 (277)
.... ..+....+++ +.++..+. ++ .|.+||+.+++.... .... ......|+|+|++|+..
T Consensus 233 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 312 (388)
T 3pe7_A 233 THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDS 312 (388)
T ss_dssp CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC--------
T ss_pred eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeecc
Confidence 2111 2344555654 44544332 22 399999987753211 1111 01223799999987754
Q ss_pred ----ecCCeEEEEECCCCceEEEEeccccc-e--------eeeeeEecCCCceEEee-cCCCeEEEEEC
Q 023772 203 ----CLDSTLRLLDRSTGELLQEYKGHICK-S--------FKTDCCLTNSDAHVTGG-SEDGYIYFWDL 257 (277)
Q Consensus 203 ----~~d~~i~~wd~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~l~sg-s~d~~i~iwd~ 257 (277)
..+..|++||+.+++. ..+..+... . .....+++|+|+.|+.. ..+|...+|.+
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 313 GYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp ----CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 4566899999988765 344444220 0 13456789999887754 45666666644
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=2.2e-16 Score=132.04 Aligned_cols=235 Identities=12% Similarity=-0.003 Sum_probs=150.2
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEE-------------------EEEcCCCCEEEEE-----
Q 023772 23 AARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD-------------------VHVTADNSKLISC----- 78 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~l~t~----- 78 (277)
.+.|+|||++|+.++.++.|.+||+.+++....+..+...... ..++|+++.++.+
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 3789999999999999999999999988776666545443222 3456777666543
Q ss_pred eCCCcEEEEECCCCceeEEeecccCceeEEEEec-CCCEEEEEeCC------CcEEEEeCccCCCcceEeeccc-cCcEE
Q 023772 79 GGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNE-YSSVVVSAGYD------QSLRAWDCRSHSTEPIQIIDSF-QDSVM 150 (277)
Q Consensus 79 s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~-~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~-~~~~~ 150 (277)
..+..|.+||+.+++..... .+...+..+.|+| +++.++..+.+ ..|.+||+..... ....... ...+.
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~ 241 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV--RKIKEHAEGESCT 241 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC--EESSCCCTTEEEE
T ss_pred CCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce--eEeeccCCCcccc
Confidence 45678999999988765443 5677889999999 78777666544 3588888754322 1222211 22344
Q ss_pred EEEecC--CeEEEeecC-----CcEEEEEccCCcccccCCCCCeeEEEEeC-CCCEEEEEe----------------cCC
Q 023772 151 SVCLTK--TEIIGGSVD-----GTVRTFDIRVGRELSDDLGQPVNCISMSN-DGNCILASC----------------LDS 206 (277)
Q Consensus 151 ~~~~~~--~~~~~g~~d-----~~i~i~d~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~----------------~d~ 206 (277)
.+.+++ ..++..+.+ +.|.+||+.+++........... +.|+| +|++++.++ .+.
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 555554 446655443 44999999876532211111233 89999 999887754 347
Q ss_pred eEEEEECCCCceEEEEeccccce---------eeeeeEecCCCceEEeec-CCCe--EEEEECcCccc
Q 023772 207 TLRLLDRSTGELLQEYKGHICKS---------FKTDCCLTNSDAHVTGGS-EDGY--IYFWDLVDASV 262 (277)
Q Consensus 207 ~i~~wd~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~sgs-~d~~--i~iwd~~~~~~ 262 (277)
.|++||+.+++.. .+..+.... ......++|+++.|+..+ .++. |+.+|+..++.
T Consensus 321 ~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 321 FLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp EEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred cEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 8999999887653 344332100 123456899998877654 3554 44455555443
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=1.7e-15 Score=135.40 Aligned_cols=252 Identities=12% Similarity=0.083 Sum_probs=160.0
Q ss_pred ceeeccCCcEE---------EEEEe--CCCCE-EEEEeC-CCcEEEEcCC--C-CeeEEEEec-----cCccEEEEEEcC
Q 023772 12 NVLKGHEGAVL---------AARFN--GDGNY-CLSCGK-DRTIRLWNPH--R-GIHIKTYKS-----HGREVRDVHVTA 70 (277)
Q Consensus 12 ~~l~~H~~~V~---------~~~~~--~~~~~-l~s~s~-d~~v~iwd~~--~-~~~~~~~~~-----h~~~v~~~~~~~ 70 (277)
..+..|...+. ...|+ |||++ |+..+. +..|.+|+.. . +. ...+.. |...+.+++|+|
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEET
T ss_pred ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECC
Confidence 34555665655 56666 99998 765443 5666667765 2 33 444544 667889999999
Q ss_pred CCCEEEEEeCC----------CcEEEEECCC------CceeEEee-cccCceeEEEEecCCCEEEEEeCCC--------c
Q 023772 71 DNSKLISCGGD----------RQIFYWDVST------GRVIRKFR-GHESEVNAVKFNEYSSVVVSAGYDQ--------S 125 (277)
Q Consensus 71 ~~~~l~t~s~d----------~~v~~wd~~~------~~~~~~~~-~h~~~v~~i~~~~~~~~l~s~~~d~--------~ 125 (277)
++++|+.++.| ..|++||+.+ ++. ..+. .+...+..+.|+||++.|+.++.++ .
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~ 218 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTE 218 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEE
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcE
Confidence 99999998877 5899999988 554 4455 5667788899999999998887553 7
Q ss_pred EEEEeCc-cCCC-cceEeeccccCcEEEEEecC--CeEEEeecCC--cEEEEEccCCcccc--cCCCC--------CeeE
Q 023772 126 LRAWDCR-SHST-EPIQIIDSFQDSVMSVCLTK--TEIIGGSVDG--TVRTFDIRVGRELS--DDLGQ--------PVNC 189 (277)
Q Consensus 126 i~iwd~~-~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d~--~i~i~d~~~~~~~~--~~~~~--------~v~~ 189 (277)
|.+||+. +... ........+...+..+.+++ ..++++..++ .|..||+..++... ..... .+..
T Consensus 219 i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~ 298 (662)
T 3azo_A 219 LKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRW 298 (662)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCS
T ss_pred EEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCce
Confidence 9999987 3311 22223333345666677664 4466667777 55566654443211 11111 1567
Q ss_pred EEEeCCCCEEEEEecCCeEEEE--ECCCCceEEEEeccccceeeeee-EecCCCceEEeecCCC--eEEEEECcCcccee
Q 023772 190 ISMSNDGNCILASCLDSTLRLL--DRSTGELLQEYKGHICKSFKTDC-CLTNSDAHVTGGSEDG--YIYFWDLVDASVVA 264 (277)
Q Consensus 190 ~~~s~~~~~l~~~~~d~~i~~w--d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~sgs~d~--~i~iwd~~~~~~~~ 264 (277)
++|+|++.+++++.. +.++|| |..+++ ++.+..+... .... .+..+..++++++.+. .|+.||+.+++...
T Consensus 299 ~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 299 FAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTE--WAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp EEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCE--EEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred EeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCe--EEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 899999999999888 999999 665555 5666655322 1222 3333333444555554 45566777776543
Q ss_pred eeccC
Q 023772 265 KFKAH 269 (277)
Q Consensus 265 ~~~~h 269 (277)
....|
T Consensus 375 l~~~~ 379 (662)
T 3azo_A 375 IGARH 379 (662)
T ss_dssp EESCC
T ss_pred eecCC
Confidence 33333
No 180
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.71 E-value=6e-15 Score=133.58 Aligned_cols=247 Identities=9% Similarity=0.013 Sum_probs=157.4
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCC-----CcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCc-------
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKD-----RTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQ------- 83 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~------- 83 (277)
+|...+...+|||||++|+.++.+ ..|++||+.+++.+... .+...+..++|+|+ +.|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 454578899999999999876544 46999999998875432 12223367899999 98888876654
Q ss_pred -------EEEEECCCCc----eeEEeecccCceeEEEEecCCCEEEEEeCCC-----cEEEEeCccCCCc-ceEeecccc
Q 023772 84 -------IFYWDVSTGR----VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ-----SLRAWDCRSHSTE-PIQIIDSFQ 146 (277)
Q Consensus 84 -------v~~wd~~~~~----~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~-~~~~~~~~~ 146 (277)
|++|++.++. ++.....+...+.++.++|+++.|+..+.++ .|.+||+...... .........
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 8999998765 2222223334588899999999888877554 7999998754212 222222222
Q ss_pred CcEEEEEecCCeEEEeec----CCcEEEEEccCCc----ccccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECC-CCc
Q 023772 147 DSVMSVCLTKTEIIGGSV----DGTVRTFDIRVGR----ELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRS-TGE 217 (277)
Q Consensus 147 ~~~~~~~~~~~~~~~g~~----d~~i~i~d~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~-~~~ 217 (277)
.....+..++..++..+. ++.|.+||+..+. .+.......+..++++ ++..+++...|+..+||.+. +++
T Consensus 318 ~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 396 (741)
T 1yr2_A 318 AQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGK 396 (741)
T ss_dssp SCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSC
T ss_pred ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 233334456677666554 3459999987641 2222223346667777 55667788889987777553 455
Q ss_pred eEEEEeccccceeeeeeEecCCCceEE----eecCCCeEEEEECcCccceeeec
Q 023772 218 LLQEYKGHICKSFKTDCCLTNSDAHVT----GGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~----sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
..+.+.... ........+++++..++ +....++|+.||+.+++ ...++
T Consensus 397 ~~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~-~~~l~ 448 (741)
T 1yr2_A 397 PAGAVSLPG-IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK-TTPWE 448 (741)
T ss_dssp EEEECBCSS-SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE-EEECS
T ss_pred ceeeccCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEEe
Confidence 555554321 12233445677776555 33456899999998876 33443
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=1.3e-14 Score=118.88 Aligned_cols=238 Identities=9% Similarity=0.033 Sum_probs=159.6
Q ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEee
Q 023772 20 AVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFR 99 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~ 99 (277)
....+.+.. +++.++...++.|.+||..+++.+.++. .......++++++++.+++...++.|.+||+++++...++.
T Consensus 45 ~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 45 VAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp CEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred cceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 356777753 4555566678999999999999988885 34678999998888544554489999999999998887766
Q ss_pred ccc-----CceeEEEEecCCCEEEEEe-CCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeecC------
Q 023772 100 GHE-----SEVNAVKFNEYSSVVVSAG-YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSVD------ 165 (277)
Q Consensus 100 ~h~-----~~v~~i~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~d------ 165 (277)
... .....+.+ ..++++++.. .++.|.++|+.+........... ....+.+++ ..+++...+
T Consensus 123 ~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~ 198 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGSPY 198 (328)
T ss_dssp CTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTCSS
T ss_pred cCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC---CccceEEcCCCCEEEEECCCccCCcc
Confidence 433 13455677 4444455443 48999999987654322211111 112333343 334444333
Q ss_pred ----CcEEEEEccCCccccc---CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEE--EeccccceeeeeeEe
Q 023772 166 ----GTVRTFDIRVGRELSD---DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQE--YKGHICKSFKTDCCL 236 (277)
Q Consensus 166 ----~~i~i~d~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~--~~~~~~~~~~~~~~~ 236 (277)
+.|.++|..+++.... ..+..++.++|+|+++.|..+.. .|.+||..+++.... +... .......++
T Consensus 199 ~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~v 274 (328)
T 3dsm_A 199 GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFR--DTKYYGLTV 274 (328)
T ss_dssp CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCC--SSCEEEEEE
T ss_pred ccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCC--CCceEEEEE
Confidence 6899999987754322 22346899999999998877654 899999988876421 1111 122344567
Q ss_pred cC-CCceEEee----cCCCeEEEEECcCccceeeecc
Q 023772 237 TN-SDAHVTGG----SEDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 237 ~~-~~~~l~sg----s~d~~i~iwd~~~~~~~~~~~~ 268 (277)
+| ++.+.++. ..++.|.+||.. ++++.+++.
T Consensus 275 dp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 275 NPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp CTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE
T ss_pred cCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe
Confidence 87 55555666 678999999998 999988874
No 182
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=1.7e-14 Score=119.75 Aligned_cols=231 Identities=11% Similarity=0.080 Sum_probs=145.4
Q ss_pred EEEEeC--CCcEEEEc--CCCCeeEEE--Ee-ccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCceeEEeecc-cC
Q 023772 33 CLSCGK--DRTIRLWN--PHRGIHIKT--YK-SHGREVRDVHVTADNSKLISCGGDRQIFYWDVS-TGRVIRKFRGH-ES 103 (277)
Q Consensus 33 l~s~s~--d~~v~iwd--~~~~~~~~~--~~-~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~-~~~~~~~~~~h-~~ 103 (277)
++.|+. ++.|.+|+ ..+++.... .. .+...+..++|+|++++|++++.+ .|.+|++. ++++....... ..
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC
Confidence 344443 24577665 456654322 21 233468899999999999998888 99999997 77765433211 12
Q ss_pred ceeEEEEecCCCE--EEEEe-------------CCCcEEEEeCcc-CCCcc-eEeec-cccCcEEEEEecCC--eEEEee
Q 023772 104 EVNAVKFNEYSSV--VVSAG-------------YDQSLRAWDCRS-HSTEP-IQIID-SFQDSVMSVCLTKT--EIIGGS 163 (277)
Q Consensus 104 ~v~~i~~~~~~~~--l~s~~-------------~d~~i~iwd~~~-~~~~~-~~~~~-~~~~~~~~~~~~~~--~~~~g~ 163 (277)
....+.++|+++. +++++ .++++.+|++.. ..... +.... .....+..+.++++ .++++.
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 3455889999984 45553 689999999863 22111 11111 12345666666654 466554
Q ss_pred -cCCcEEEEEcc-CCccc--cc---C-CCCCeeEEEEeCCCCEEEEEec-CCeEEEEECC--CCceE---EEEeccc---
Q 023772 164 -VDGTVRTFDIR-VGREL--SD---D-LGQPVNCISMSNDGNCILASCL-DSTLRLLDRS--TGELL---QEYKGHI--- 226 (277)
Q Consensus 164 -~d~~i~i~d~~-~~~~~--~~---~-~~~~v~~~~~s~~~~~l~~~~~-d~~i~~wd~~--~~~~~---~~~~~~~--- 226 (277)
.++.|++||+. +++.. .. . .+..+..++|+|+|+++++++. ++.+.+|++. ++++. +.+....
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 46799999997 55421 11 1 2456899999999999887765 7899999864 56543 2222110
Q ss_pred -cce-------eeeeeE-ecCCCceEEeecCC-C-----eEEEEECc-Ccccee
Q 023772 227 -CKS-------FKTDCC-LTNSDAHVTGGSED-G-----YIYFWDLV-DASVVA 264 (277)
Q Consensus 227 -~~~-------~~~~~~-~~~~~~~l~sgs~d-~-----~i~iwd~~-~~~~~~ 264 (277)
... ....++ ++|+|++|+++..+ + .|++|++. ++++..
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred CCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 001 345577 89999988766532 2 89999996 666543
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=2.2e-14 Score=117.95 Aligned_cols=232 Identities=13% Similarity=0.109 Sum_probs=145.3
Q ss_pred CcEEEEEEeCCCCEEEEEe---------CCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCC---C--cE
Q 023772 19 GAVLAARFNGDGNYCLSCG---------KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGD---R--QI 84 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s---------~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d---~--~v 84 (277)
..+...++ ||++++... .++.|.+||+.+++.. .+ ..+....|+|++++|+.++.+ + .|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 44667777 888887542 3678999999887643 33 568899999999999887654 2 48
Q ss_pred EEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCC---------------------------CcEEEEeCccCCCc
Q 023772 85 FYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD---------------------------QSLRAWDCRSHSTE 137 (277)
Q Consensus 85 ~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d---------------------------~~i~iwd~~~~~~~ 137 (277)
.+||+++++.......+ . +..+.|+|+++.|+.++.+ ..|.+||+.....
T Consensus 88 ~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~- 164 (347)
T 2gop_A 88 WVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV- 164 (347)
T ss_dssp EEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE-
T ss_pred EEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE-
Confidence 88898888765544433 3 8999999999988887642 5788899875432
Q ss_pred ceEeeccccCcEEEEEecCCe-EEEeecC------C-cEEEEEccCCcccccCCCCCeeEEEEeCCCCEEEEEecC----
Q 023772 138 PIQIIDSFQDSVMSVCLTKTE-IIGGSVD------G-TVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLD---- 205 (277)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~d------~-~i~i~d~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---- 205 (277)
...+.. . .+..+.++++. ++++..+ . ...+|.+..++.........+. .++|+|++|+.++.+
T Consensus 165 -~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~~~~~--~~spdg~~l~~~~~~~~~~ 239 (347)
T 2gop_A 165 -IEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEKVSFY--AVDSDGERILLYGKPEKKY 239 (347)
T ss_dssp -EEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEEESEE--EEEECSSCEEEEECCSSSC
T ss_pred -EeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCceEEeccCccee--eECCCCCEEEEEEccccCC
Confidence 011221 2 34455555554 3344433 1 3455544433221111112333 349999988877754
Q ss_pred ----CeEEEEECCCCceEEEEeccccceeeee-eEecCCCceEEeecCCCeEEEEECcCccceeeeccCccee
Q 023772 206 ----STLRLLDRSTGELLQEYKGHICKSFKTD-CCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273 (277)
Q Consensus 206 ----~~i~~wd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v 273 (277)
..|++|| +++......++.. .... ..++ ++ ++++++.++.+++| +.+++... +..+...|
T Consensus 240 ~~~~~~l~~~d--~~~~~~l~~~~~~--~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v 304 (347)
T 2gop_A 240 MSEHNKLYIYD--GKEVMGILDEVDR--GVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWI 304 (347)
T ss_dssp CCSSCEEEEEC--SSCEEESSTTCCS--EEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEE
T ss_pred ccccceEEEEC--CCceEeccccCCc--ccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeE
Confidence 3688888 5554433333321 2222 5577 77 88899999999999 88665543 33334443
No 184
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.68 E-value=2.3e-13 Score=110.22 Aligned_cols=251 Identities=10% Similarity=0.121 Sum_probs=164.2
Q ss_pred CCcCCccccccceeeccCCcEEEEEEeCCCCEEEE-------EeCCCcEEEEcCCCCeeEEEEe----ccCccEEEEEEc
Q 023772 1 MSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLS-------CGKDRTIRLWNPHRGIHIKTYK----SHGREVRDVHVT 69 (277)
Q Consensus 1 ~~~~~~~~~~~~~l~~H~~~V~~~~~~~~~~~l~s-------~s~d~~v~iwd~~~~~~~~~~~----~h~~~v~~~~~~ 69 (277)
|.+..++.. ...+...-....+++|+++|.++++ ...++.|.+||..+++...... ++...+.+++++
T Consensus 1 ~~i~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~ 79 (314)
T 1pjx_A 1 MEIPVIEPL-FTKVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCD 79 (314)
T ss_dssp CCSCEECCC-CEEEECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEEC
T ss_pred CccccccHh-HhhhhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEe
Confidence 444444332 2234444556789999999998888 6788999999988876543222 144678999999
Q ss_pred CC-CCEEEEEeCCCcEEEEECCCCceeEE-eec----ccCceeEEEEecCCCEEEEEeCC---------------CcEEE
Q 023772 70 AD-NSKLISCGGDRQIFYWDVSTGRVIRK-FRG----HESEVNAVKFNEYSSVVVSAGYD---------------QSLRA 128 (277)
Q Consensus 70 ~~-~~~l~t~s~d~~v~~wd~~~~~~~~~-~~~----h~~~v~~i~~~~~~~~l~s~~~d---------------~~i~i 128 (277)
++ ++.+++. ..+.|.+||.+ ++.... ... ....+.++.+.+++++.++...+ +.|..
T Consensus 80 ~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 80 RDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred cCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE
Confidence 98 6545544 44579999998 665432 211 12457899999999988887665 56777
Q ss_pred EeCccCCCcceEeeccccCcEEEEEec----CC--eEEEe-ecCCcEEEEEcc-CCc-----ccccCCC---CCeeEEEE
Q 023772 129 WDCRSHSTEPIQIIDSFQDSVMSVCLT----KT--EIIGG-SVDGTVRTFDIR-VGR-----ELSDDLG---QPVNCISM 192 (277)
Q Consensus 129 wd~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~g-~~d~~i~i~d~~-~~~-----~~~~~~~---~~v~~~~~ 192 (277)
|+.. ... ............+.++ ++ .++.+ ..++.|.+||+. .++ .+..... ..+..+++
T Consensus 158 ~~~~-g~~---~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 158 FTTD-GQM---IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp ECTT-SCE---EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred ECCC-CCE---EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence 7754 221 1111111223444555 44 34444 567899999976 332 1111111 45788999
Q ss_pred eCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCc-eEEeecCCCeEEEEECcCc
Q 023772 193 SNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA-HVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 193 s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~d~~i~iwd~~~~ 260 (277)
+++|+.+++...++.|.+||..+++.+..+..+. .....++++++++ +.++...++.|..|++...
T Consensus 234 d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~--~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 234 DEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF--EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp BTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS--SCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCC--CCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 9999988888788999999998777766665442 2345567788888 4455667789999998753
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=1.4e-12 Score=104.50 Aligned_cols=240 Identities=9% Similarity=0.027 Sum_probs=164.7
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEE-eccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTY-KSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTG 92 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~ 92 (277)
+..+...+.+++++++|++.++...++.|.+||.. +...... ..+...+.++++.+++...++...++.|..||.+ +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 34556789999999999988887778999999988 5433222 2345679999999999888887778899999986 3
Q ss_pred ceeEEee--cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC-eEE-EeecCCcE
Q 023772 93 RVIRKFR--GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-EII-GGSVDGTV 168 (277)
Q Consensus 93 ~~~~~~~--~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~g~~d~~i 168 (277)
+. ..+. .....+.++.+.++++++++...++.|..||. ....... ........+..+..+++ .++ +...++.|
T Consensus 88 ~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 88 II-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREY-ELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp CE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred cE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEe-cCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 32 2222 24557889999999998888777889999997 3322111 11222334566666644 344 44456889
Q ss_pred EEEEccCCcccc--c-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEe
Q 023772 169 RTFDIRVGRELS--D-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245 (277)
Q Consensus 169 ~i~d~~~~~~~~--~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 245 (277)
..||. .++... . .....+..++++++|..+++...++.|..||. +++.. .+...........+++.+++.+.++
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECCCCCEEEe
Confidence 99998 543221 1 12346789999999997777767889999999 66643 3322211223445667888887777
Q ss_pred ecCCCeEEEEECcCccc
Q 023772 246 GSEDGYIYFWDLVDASV 262 (277)
Q Consensus 246 gs~d~~i~iwd~~~~~~ 262 (277)
...++.|..||. +++.
T Consensus 242 ~~~~~~i~~~d~-~g~~ 257 (299)
T 2z2n_A 242 EWGANKIGRLTS-NNII 257 (299)
T ss_dssp ETTTTEEEEEET-TTEE
T ss_pred ccCCceEEEECC-CCce
Confidence 667889999998 4543
No 186
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=6.3e-14 Score=114.74 Aligned_cols=206 Identities=12% Similarity=0.121 Sum_probs=145.8
Q ss_pred CccEEEEEEcCCCCEEEEEeCC------------------------CcEEEEECCCCceeEEee-cccCceeEEEEecCC
Q 023772 60 GREVRDVHVTADNSKLISCGGD------------------------RQIFYWDVSTGRVIRKFR-GHESEVNAVKFNEYS 114 (277)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~s~d------------------------~~v~~wd~~~~~~~~~~~-~h~~~v~~i~~~~~~ 114 (277)
-+.+.+++++++++.+++.+.+ ++|.+||.++++.+..+. .+-.....+++.+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3578999999999999888777 479999999998877665 344578899999999
Q ss_pred CEEEEEeCCCcEEEEeCccCCCcceEeec---------cccCcEEEEEecC---CeEEEee-cCCcEEEEEccCCccccc
Q 023772 115 SVVVSAGYDQSLRAWDCRSHSTEPIQIID---------SFQDSVMSVCLTK---TEIIGGS-VDGTVRTFDIRVGRELSD 181 (277)
Q Consensus 115 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---------~~~~~~~~~~~~~---~~~~~g~-~d~~i~i~d~~~~~~~~~ 181 (277)
+++++...++.|++||..... ..+..+. ........+.+++ ..+++.+ .++.|++||. .++.+..
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~ 180 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQ 180 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEE
Confidence 999999899999999975431 1222221 2223456677765 2355554 5899999994 3432221
Q ss_pred C--C----------CCCeeEEEEeCC-CCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecC------CCce
Q 023772 182 D--L----------GQPVNCISMSND-GNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTN------SDAH 242 (277)
Q Consensus 182 ~--~----------~~~v~~~~~s~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 242 (277)
. . -..+..++++|+ +..+++...++.|++||..+++.+..+............+++| ++..
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~ 260 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKP 260 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCE
Confidence 1 0 123789999998 7777888889999999999899888875432122223445666 3444
Q ss_pred EEeecCCCeEEEEECcCccceeeec
Q 023772 243 VTGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 243 l~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
.++.+.+..|++||..+++++..+.
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~ 285 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFK 285 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEEC
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEc
Confidence 4444566799999999999998874
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.66 E-value=3.4e-14 Score=117.88 Aligned_cols=236 Identities=11% Similarity=0.043 Sum_probs=156.8
Q ss_pred CCCEEEEEe------CCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEe----------CCCcEEEEECCCC
Q 023772 29 DGNYCLSCG------KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCG----------GDRQIFYWDVSTG 92 (277)
Q Consensus 29 ~~~~l~s~s------~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s----------~d~~v~~wd~~~~ 92 (277)
++++++.+. .|+.|.+||..+++.+.++..+..+ .++|+|+++++++++ .++.|.+||+.+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 455555432 4789999999999988888876555 899999999999886 3678999999999
Q ss_pred ceeEEeecc------cCceeEEEEecCCCEEEEEeC--CCcEEEEeCccCCCcceEe-eccccCcEEEEEec---CCeEE
Q 023772 93 RVIRKFRGH------ESEVNAVKFNEYSSVVVSAGY--DQSLRAWDCRSHSTEPIQI-IDSFQDSVMSVCLT---KTEII 160 (277)
Q Consensus 93 ~~~~~~~~h------~~~v~~i~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~ 160 (277)
+.+.++... ......+.++|++++++.+.. +++|.+||+.+... +.. +.. .. ...+... +..++
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~--~~~~i~~-~~-~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY--VEDVTAA-AG-CWSVIPQPNRPRSFM 167 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE--EEEEGGG-TT-EEEEEECTTSSSEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE--EEEEecC-CC-cceeEEcCCCCeeEE
Confidence 888777532 234567999999999998874 68999999976422 222 211 11 1111222 24577
Q ss_pred EeecCCcEEEEEccC-Cccc------cc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCce--EEEEeccc----
Q 023772 161 GGSVDGTVRTFDIRV-GREL------SD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGEL--LQEYKGHI---- 226 (277)
Q Consensus 161 ~g~~d~~i~i~d~~~-~~~~------~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~---- 226 (277)
+.+.||.+.+|++.. ++.. .. ........+.+++++..++..+.++.++++|+..... +..+....
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 888899999998864 3322 00 0111112234467777777778899999999975532 22222110
Q ss_pred --c--ceeeeeeEecCCCceEEeecC-----------CCeEEEEECcCccceeeeccCc
Q 023772 227 --C--KSFKTDCCLTNSDAHVTGGSE-----------DGYIYFWDLVDASVVAKFKAHS 270 (277)
Q Consensus 227 --~--~~~~~~~~~~~~~~~l~sgs~-----------d~~i~iwd~~~~~~~~~~~~h~ 270 (277)
. ..-....+++++++.+..+.. ++.|.+||..+++.++++..+.
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~ 306 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD 306 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC
Confidence 0 000112467888777665432 3589999999999999998765
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.66 E-value=4.5e-14 Score=115.57 Aligned_cols=222 Identities=11% Similarity=0.098 Sum_probs=152.4
Q ss_pred eCCCcEEEEcCCCCeeEEEEe------ccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEE
Q 023772 37 GKDRTIRLWNPHRGIHIKTYK------SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF 110 (277)
Q Consensus 37 s~d~~v~iwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~ 110 (277)
+.+++|.+||..+++....+. ........+.+. +++.+++...++.|.+||.++++.+.++.. ......+++
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~ 91 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHF 91 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEE
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEE
Confidence 348999999999987655431 112345677774 445556666789999999999999888853 456788999
Q ss_pred ecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccc---cCcEEEEEecCCeEEEee--cCCcEEEEEccCCccccc-CCC
Q 023772 111 NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSF---QDSVMSVCLTKTEIIGGS--VDGTVRTFDIRVGRELSD-DLG 184 (277)
Q Consensus 111 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~--~d~~i~i~d~~~~~~~~~-~~~ 184 (277)
++++++.++...++.|.+||+.+............ ......+.+....++++. .++.|.++|+.+++.... ..+
T Consensus 92 ~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 92 LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred eCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 88886555555899999999876543222111220 001122333566666555 488999999988764432 223
Q ss_pred CCeeEEEEeCCCCEEEEEecC----------CeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEE
Q 023772 185 QPVNCISMSNDGNCILASCLD----------STLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYF 254 (277)
Q Consensus 185 ~~v~~~~~s~~~~~l~~~~~d----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~i 254 (277)
.....+.++|+|++++++..+ +.|.++|..+++....+..... ......+++|+++++..+.. .|++
T Consensus 172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~--~v~~ 248 (328)
T 3dsm_A 172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG-DWPSEVQLNGTRDTLYWINN--DIWR 248 (328)
T ss_dssp SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT-CCCEEEEECTTSCEEEEESS--SEEE
T ss_pred CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC-CCceeEEEecCCCEEEEEcc--EEEE
Confidence 456788999999877776654 7899999999988777653211 13455678998888877644 8999
Q ss_pred EECcCccce
Q 023772 255 WDLVDASVV 263 (277)
Q Consensus 255 wd~~~~~~~ 263 (277)
||..++++.
T Consensus 249 ~d~~t~~~~ 257 (328)
T 3dsm_A 249 MPVEADRVP 257 (328)
T ss_dssp EETTCSSCC
T ss_pred EECCCCcee
Confidence 999988764
No 189
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.66 E-value=5e-14 Score=127.56 Aligned_cols=208 Identities=11% Similarity=0.035 Sum_probs=135.6
Q ss_pred cceeeccCCc-----EEEEEEeCCCCEEEEEeCC---------CcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE
Q 023772 11 ANVLKGHEGA-----VLAARFNGDGNYCLSCGKD---------RTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI 76 (277)
Q Consensus 11 ~~~l~~H~~~-----V~~~~~~~~~~~l~s~s~d---------~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 76 (277)
...+.+|... .....|||||++|+.++.+ +.+.+||+.+++.. .+..|...+...+|+|++++|+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la 127 (740)
T 4a5s_A 49 SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLA 127 (740)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEE
T ss_pred EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEE
Confidence 3445666533 2447899999999998887 55679999998754 4566778899999999999998
Q ss_pred EEeCCCcEEEEECCCCceeE-EeecccCce-----------------eEEEEecCCCEEEEEeCCC--------------
Q 023772 77 SCGGDRQIFYWDVSTGRVIR-KFRGHESEV-----------------NAVKFNEYSSVVVSAGYDQ-------------- 124 (277)
Q Consensus 77 t~s~d~~v~~wd~~~~~~~~-~~~~h~~~v-----------------~~i~~~~~~~~l~s~~~d~-------------- 124 (277)
.++ |+.|++||+.+++..+ +..++...+ .++.|+||++.|+.++.|.
T Consensus 128 ~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~ 206 (740)
T 4a5s_A 128 YVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE 206 (740)
T ss_dssp EEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST
T ss_pred EEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC
Confidence 875 6899999998877543 222333222 3488999999999886443
Q ss_pred ----------------------cEEEEeCcc---CCCcceEeec------cccCcEEEEEecCCe--EEEee----cCCc
Q 023772 125 ----------------------SLRAWDCRS---HSTEPIQIID------SFQDSVMSVCLTKTE--IIGGS----VDGT 167 (277)
Q Consensus 125 ----------------------~i~iwd~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~g~----~d~~ 167 (277)
+|++||+.+ ........+. .+...+..+.++++. ++... .+..
T Consensus 207 ~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~ 286 (740)
T 4a5s_A 207 SLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSV 286 (740)
T ss_dssp TCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEE
T ss_pred CCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE
Confidence 366777765 3210111221 133445555555433 33322 2346
Q ss_pred EEEEEccCCc----c--cc----cCCCCC-----eeEEEEeCCCCEEE-EEec-C--CeEEEEECCCCceEE
Q 023772 168 VRTFDIRVGR----E--LS----DDLGQP-----VNCISMSNDGNCIL-ASCL-D--STLRLLDRSTGELLQ 220 (277)
Q Consensus 168 i~i~d~~~~~----~--~~----~~~~~~-----v~~~~~s~~~~~l~-~~~~-d--~~i~~wd~~~~~~~~ 220 (277)
|.+||+.+++ + .. .....- .....|+|||+.|+ ..+. + ..|++||...++..+
T Consensus 287 i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 287 MDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp EEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred EEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 9999998876 1 11 112222 23678999999877 5553 3 368889998766543
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=2e-13 Score=109.88 Aligned_cols=214 Identities=10% Similarity=0.002 Sum_probs=143.6
Q ss_pred CeeEEEEeccCccEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEE
Q 023772 50 GIHIKTYKSHGREVRDVHVTADNS-KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRA 128 (277)
Q Consensus 50 ~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~i 128 (277)
+..+..+..+.....+++|+|+++ .++++..++.|..||.+++ ...+..+...+.+++++++++++++...++.|.+
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 344556666667789999999998 7778888999999999887 5667777788999999999999888777889999
Q ss_pred EeCccCCCcceEee-ccc-cCcEEEEEecC--CeEEE----eec-------------CCcEEEEEccCCccc-ccCCCCC
Q 023772 129 WDCRSHSTEPIQII-DSF-QDSVMSVCLTK--TEIIG----GSV-------------DGTVRTFDIRVGREL-SDDLGQP 186 (277)
Q Consensus 129 wd~~~~~~~~~~~~-~~~-~~~~~~~~~~~--~~~~~----g~~-------------d~~i~i~d~~~~~~~-~~~~~~~ 186 (277)
||..+......... ... ...+..+.+++ ..+++ |+. .+.|..+|.. ++.. .......
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~ 173 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK 173 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC
Confidence 99865432221111 000 11122344444 33444 331 2345555544 2211 1122346
Q ss_pred eeEEEEeCCCCEEEEEecCCeEEEEECC-CCce---EEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccc
Q 023772 187 VNCISMSNDGNCILASCLDSTLRLLDRS-TGEL---LQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 187 v~~~~~s~~~~~l~~~~~d~~i~~wd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~ 262 (277)
.+.++|+|+|+.+++.+.++.|++||+. ++++ ...+..+ .......++.++|++.++. ++.|++||.. ++.
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~--~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVE--PGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCS--SSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC--CCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence 7899999999988777788999999986 5554 2333111 2223446778888876665 7899999986 778
Q ss_pred eeeeccCcc
Q 023772 263 VAKFKAHSL 271 (277)
Q Consensus 263 ~~~~~~h~~ 271 (277)
+..+..+..
T Consensus 249 ~~~~~~~~~ 257 (296)
T 3e5z_A 249 LGRVLTPQT 257 (296)
T ss_dssp EEEEECSSC
T ss_pred EEEEECCCC
Confidence 888776654
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.64 E-value=3.9e-13 Score=121.14 Aligned_cols=245 Identities=11% Similarity=0.011 Sum_probs=154.6
Q ss_pred CCCCEEEEEeCCC-----cEEEEcCCCCeeEEEEe------ccCccEEEEEEcCCCCEEEEEeCCC-----cEEEEECCC
Q 023772 28 GDGNYCLSCGKDR-----TIRLWNPHRGIHIKTYK------SHGREVRDVHVTADNSKLISCGGDR-----QIFYWDVST 91 (277)
Q Consensus 28 ~~~~~l~s~s~d~-----~v~iwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~t~s~d~-----~v~~wd~~~ 91 (277)
|+|++++-...++ .+.+.+...+.....+. +|...+..+.|+|++++|+.++.++ .|++||+++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 7888777543322 23333444443322221 2444688999999999998765543 899999999
Q ss_pred CceeEEeecccCceeEEEEecCCCEEEEEeCCCc----------------EEEEeCccCCCcceEeecc--ccCcEEEEE
Q 023772 92 GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS----------------LRAWDCRSHSTEPIQIIDS--FQDSVMSVC 153 (277)
Q Consensus 92 ~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~----------------i~iwd~~~~~~~~~~~~~~--~~~~~~~~~ 153 (277)
++.......+ ..+.++.|+||++.|+.++.++. |++|++.+........... +......+.
T Consensus 161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 9876543322 23667999999999999988876 9999987654332333332 233345555
Q ss_pred ecC--CeEEEeec-----CCcEEEEEccC------Cc-ccc--cCCCCCeeEEEEeCCCCEEEEEecC----CeEEEEEC
Q 023772 154 LTK--TEIIGGSV-----DGTVRTFDIRV------GR-ELS--DDLGQPVNCISMSNDGNCILASCLD----STLRLLDR 213 (277)
Q Consensus 154 ~~~--~~~~~g~~-----d~~i~i~d~~~------~~-~~~--~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~~wd~ 213 (277)
+++ ..++..+. +..|.+||+.. +. .+. ......+.. .|+|+|+.|+..+.+ ..|.+||+
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~ 318 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDF 318 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEET
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 554 45665543 56899999976 32 111 112223333 588899887766553 36999999
Q ss_pred CCCc--eEEEEeccccceeeeeeEecCCCceEEeecCCCe--EEEEECcCccceeeeccCcceeE
Q 023772 214 STGE--LLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGY--IYFWDLVDASVVAKFKAHSLVVK 274 (277)
Q Consensus 214 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~--i~iwd~~~~~~~~~~~~h~~~v~ 274 (277)
.++. ..+.+..+..........+++++.+++++..|+. |++||+.+++.++.+..|...|.
T Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~ 383 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVV 383 (710)
T ss_dssp TSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEE
T ss_pred CCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEE
Confidence 8764 2344444432223334556677888888888885 56678778887788877655443
No 192
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=1.2e-13 Score=110.60 Aligned_cols=204 Identities=12% Similarity=0.176 Sum_probs=141.7
Q ss_pred cCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEee------cccCceeEEEEe-cCCCEEEEEeC-CCcEEEEe
Q 023772 59 HGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFR------GHESEVNAVKFN-EYSSVVVSAGY-DQSLRAWD 130 (277)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~------~h~~~v~~i~~~-~~~~~l~s~~~-d~~i~iwd 130 (277)
+-..+.++++++++..+++...++.|.+||.+ ++.+..+. .+...+..+++. ++++++++... ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 44578999999999988888889999999987 56665554 234578899994 67777776643 89999999
Q ss_pred CccCCCcceEeec-cccCcEEEEEecCC--eEEEeecCCcEEEEEccCCccccc----CCCCCeeEEEEeCCCCEEEEEe
Q 023772 131 CRSHSTEPIQIID-SFQDSVMSVCLTKT--EIIGGSVDGTVRTFDIRVGRELSD----DLGQPVNCISMSNDGNCILASC 203 (277)
Q Consensus 131 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~g~~d~~i~i~d~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~ 203 (277)
.. .. ....+. ........+.++++ .+++...++.|.+||... +.+.. .....+..++++++|+.+++..
T Consensus 107 ~~-g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 107 QY-GQ--FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp TT-SC--EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred CC-Cc--EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 43 22 222222 12234556666543 355556678999999643 22211 1224688999999999888878
Q ss_pred cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCC-eEEEEECcCccceeeeccC
Q 023772 204 LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDG-YIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 204 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~-~i~iwd~~~~~~~~~~~~h 269 (277)
.++.|++||.. ++.+..+...........+++++++.++++...++ .|++||. +++.+..+..+
T Consensus 183 ~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~ 247 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESK 247 (286)
T ss_dssp GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEES
T ss_pred CCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEccc
Confidence 89999999984 56666665432123345567889998888887776 9999995 57777777654
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=1.3e-12 Score=114.18 Aligned_cols=236 Identities=11% Similarity=0.096 Sum_probs=164.2
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECC--CCceeEEeecccCce
Q 023772 28 GDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVS--TGRVIRKFRGHESEV 105 (277)
Q Consensus 28 ~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~--~~~~~~~~~~h~~~v 105 (277)
+.+.++++...+++|.++|..+++.+.++... ..+..+.++|+++++++++.|+.|.+||+. +++.+.++..... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-A 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-E
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-C
Confidence 44557778889999999999999988888753 467799999999999999999999999995 7788887775443 4
Q ss_pred eEEEEe----cCCCEEEEEeC-CCcEEEEeCccCCCcceEeecc----------ccC-cEEEEEecC--Ce-EEEeecCC
Q 023772 106 NAVKFN----EYSSVVVSAGY-DQSLRAWDCRSHSTEPIQIIDS----------FQD-SVMSVCLTK--TE-IIGGSVDG 166 (277)
Q Consensus 106 ~~i~~~----~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~----------~~~-~~~~~~~~~--~~-~~~g~~d~ 166 (277)
..+.++ |++++++.++. ++++.++|..+.. .+..+.. ++. .+..+..++ .. ++....+|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~--~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE--PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC--EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc--EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 679999 69998877765 5999999976543 2322211 111 233343332 22 44445668
Q ss_pred cEEEEEccCCcccc---cCCCCCeeEEEEeCCCCEEEEEe-cCCeEEEEECCCCceEEEEec-cccce--eeeeeEecCC
Q 023772 167 TVRTFDIRVGRELS---DDLGQPVNCISMSNDGNCILASC-LDSTLRLLDRSTGELLQEYKG-HICKS--FKTDCCLTNS 239 (277)
Q Consensus 167 ~i~i~d~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~-~~~~~--~~~~~~~~~~ 239 (277)
.|.++|......+. ...+.....+.|+|+|++++++. .++.|.++|..+++++..+.. ..... .... .+.|+
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~~~p~ 399 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-FVHPT 399 (567)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-EEETT
T ss_pred eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-eECCC
Confidence 89999986543211 12334567889999999987765 578999999999988876653 11111 1122 24676
Q ss_pred Cce-EEeec-CCCeEEEEECcC-------ccceeeecc
Q 023772 240 DAH-VTGGS-EDGYIYFWDLVD-------ASVVAKFKA 268 (277)
Q Consensus 240 ~~~-l~sgs-~d~~i~iwd~~~-------~~~~~~~~~ 268 (277)
+.. .+++. .++.|.++|..+ .+.+++++.
T Consensus 400 ~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 400 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec
Confidence 444 44443 568999999988 567777764
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.62 E-value=7.8e-13 Score=109.28 Aligned_cols=239 Identities=11% Similarity=0.088 Sum_probs=162.3
Q ss_pred EEEEeCCCCEEEEEe----------CCCcEEEEcCCCCeeEEEEeccC-------ccEEEEEEcCCCCEEEEEeC--CCc
Q 023772 23 AARFNGDGNYCLSCG----------KDRTIRLWNPHRGIHIKTYKSHG-------REVRDVHVTADNSKLISCGG--DRQ 83 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~t~s~--d~~ 83 (277)
.+.++|||++++.++ .++.|.+||..+++.+.++.... .....+.++|++++++.+.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 499999999888765 36789999999999888876422 24678999999999888763 689
Q ss_pred EEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccc----cCcEE---EEEecC
Q 023772 84 IFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSF----QDSVM---SVCLTK 156 (277)
Q Consensus 84 v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~---~~~~~~ 156 (277)
|.++|+++++.+.++.--.. ...+....+.+++.+.||++.+.++...... ....... ...+. .+....
T Consensus 162 VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v-~~~~~~~~~~~~~~~~~~~~~~~~d 237 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP-EITHTEVFHPEDEFLINHPAYSQKA 237 (386)
T ss_dssp EEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCC-EEEECCCCSCTTSCBCSCCEEETTT
T ss_pred EEEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeE-EEeecceeccccccccccceeEcCC
Confidence 99999999999888753211 1223334556777788888888887652221 1111001 11111 111112
Q ss_pred CeEEEeecCCcEEEEEccCCcc-cccC-------------CCCCeeEEEEeCCCCEEEEEec----------CCeEEEEE
Q 023772 157 TEIIGGSVDGTVRTFDIRVGRE-LSDD-------------LGQPVNCISMSNDGNCILASCL----------DSTLRLLD 212 (277)
Q Consensus 157 ~~~~~g~~d~~i~i~d~~~~~~-~~~~-------------~~~~v~~~~~s~~~~~l~~~~~----------d~~i~~wd 212 (277)
..++-.+.+|++.+.|+..... +... .......++++++++.+..... .+.|.++|
T Consensus 238 G~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD 317 (386)
T 3sjl_D 238 GRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 317 (386)
T ss_dssp TEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEE
Confidence 2344456689999999865431 1100 0123445788999988877643 24799999
Q ss_pred CCCCceEEEEeccccceeeeeeEecCCCc-eEEe-ecCCCeEEEEECcCccceeeecc
Q 023772 213 RSTGELLQEYKGHICKSFKTDCCLTNSDA-HVTG-GSEDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s-gs~d~~i~iwd~~~~~~~~~~~~ 268 (277)
..+++.++.+.... ....+.+++|++ +|++ ...++.|.++|..+++.+++++.
T Consensus 318 ~~t~kv~~~i~vg~---~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 318 AKTGERLAKFEMGH---EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp TTTCCEEEEEEEEE---EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred CCCCeEEEEEECCC---CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC
Confidence 99999998876431 234567899986 5555 45689999999999999999984
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.62 E-value=4.1e-12 Score=105.68 Aligned_cols=233 Identities=7% Similarity=-0.076 Sum_probs=152.2
Q ss_pred EEeCCCCEEEEEeC--CC---cEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEe----------CCCcEEEEEC
Q 023772 25 RFNGDGNYCLSCGK--DR---TIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCG----------GDRQIFYWDV 89 (277)
Q Consensus 25 ~~~~~~~~l~s~s~--d~---~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s----------~d~~v~~wd~ 89 (277)
...+++++++.+.. .. +|.+||..+++.+.++.....+ .+.++|++++++.+. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34478887777653 22 8899999999988888765444 999999999998875 3678999999
Q ss_pred CCCceeEEeecc-------cCceeEEEEecCCCEEEEEeC--CCcEEEEeCccCCCcceEe-eccccCcEEEEEecCCeE
Q 023772 90 STGRVIRKFRGH-------ESEVNAVKFNEYSSVVVSAGY--DQSLRAWDCRSHSTEPIQI-IDSFQDSVMSVCLTKTEI 159 (277)
Q Consensus 90 ~~~~~~~~~~~h-------~~~v~~i~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 159 (277)
.+.+.+.++.-- ...-..+.++|++++++.++. ++.|.++| .+... ... +.. ...+......+..+
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~--~~~~i~~-~~~~~~~~~~~~~~ 180 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS--DDQLLSS-PTCYHIHPGAPSTF 180 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE--EeEEcCC-CceEEEEeCCCceE
Confidence 998887765421 122347899999999998874 57899999 76532 222 111 11111111111112
Q ss_pred EEee-----------------------------------------------cCCcEEEEEccCCcc-----cccC-----
Q 023772 160 IGGS-----------------------------------------------VDGTVRTFDIRVGRE-----LSDD----- 182 (277)
Q Consensus 160 ~~g~-----------------------------------------------~d~~i~i~d~~~~~~-----~~~~----- 182 (277)
++.. ..+.+.+.|+..... +...
T Consensus 181 ~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~ 260 (373)
T 2mad_H 181 YLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK 260 (373)
T ss_pred EEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccc
Confidence 2222 233444445432210 0000
Q ss_pred ----CCCCeeEEEEeCCCCEEEEEec----------CCeEEEEECCCCceEEEEeccccceeeeeeEecCCCc-eEEeec
Q 023772 183 ----LGQPVNCISMSNDGNCILASCL----------DSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDA-HVTGGS 247 (277)
Q Consensus 183 ----~~~~v~~~~~s~~~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs 247 (277)
.......+.++|+++.+..+.. .+.|.++|..+++.+..+.... ......+++|++ +++++.
T Consensus 261 ~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 261 ADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC---CcCeEEECCCCCeEEEEEc
Confidence 0112334778999887777543 3579999999999988885432 234567899998 677766
Q ss_pred -CCCeEEEEECcCccceeee
Q 023772 248 -EDGYIYFWDLVDASVVAKF 266 (277)
Q Consensus 248 -~d~~i~iwd~~~~~~~~~~ 266 (277)
.++.|.+||..+++.++++
T Consensus 338 ~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 338 AGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCCeEEEEECCCCCEEeee
Confidence 5899999999999999883
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=1.6e-12 Score=109.55 Aligned_cols=236 Identities=12% Similarity=0.114 Sum_probs=156.2
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCC--cEEEEECCCCceeE
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDR--QIFYWDVSTGRVIR 96 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~--~v~~wd~~~~~~~~ 96 (277)
.....++|+++++++++...++.|++||..++........ ..... ++|+++++.|+.+..++ .|.+|+...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4577899999999888878889999999988776655554 33344 99999999998888766 79999987665444
Q ss_pred Ee----ecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEe--ecccc-CcEE-EEEecC--Ce-EEEeecC
Q 023772 97 KF----RGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQI--IDSFQ-DSVM-SVCLTK--TE-IIGGSVD 165 (277)
Q Consensus 97 ~~----~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~-~~~~-~~~~~~--~~-~~~g~~d 165 (277)
.+ .......++++++|++..|+.+..++.|..||........... ..... .... .+.+++ .. +++...+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 43 2245667889999955555557778899999986543211100 11111 1101 444444 33 4555667
Q ss_pred CcEEEEEccCCcccccCC---------------CCCeeEEEEeCCCCEEEEEe-cCCeEEEEECCCCceEEEEeccc---
Q 023772 166 GTVRTFDIRVGRELSDDL---------------GQPVNCISMSNDGNCILASC-LDSTLRLLDRSTGELLQEYKGHI--- 226 (277)
Q Consensus 166 ~~i~i~d~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~--- 226 (277)
+.|+.|+........... -.....++++|+|+++++-. .++.|+.||+.+++. ..+.++.
T Consensus 289 ~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~ 367 (409)
T 3hrp_A 289 SSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVA 367 (409)
T ss_dssp TEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCB
T ss_pred CEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCC
Confidence 889999875421111000 12478899999999888877 889999999877764 4444431
Q ss_pred ----------cceeeeeeEecCCCceEEeecCCCeEEEEEC
Q 023772 227 ----------CKSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257 (277)
Q Consensus 227 ----------~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~ 257 (277)
........++.+++.+.++-..++.|+.+++
T Consensus 368 g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 368 SQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp SCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 0123445567777777777777777777665
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.61 E-value=1.1e-11 Score=99.40 Aligned_cols=235 Identities=9% Similarity=0.067 Sum_probs=155.6
Q ss_pred cCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEe--ccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Q 023772 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK--SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRV 94 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~ 94 (277)
+...+.+++++++|.+.++...++.|..||.. ++. ..+. .....+..+++.+++..+++...++.|..||. +++.
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence 44678899999999988887778899999976 432 3332 24557899999999988888777889999998 5544
Q ss_pred eEE-eecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC-eEEEe-ecCCcEEEE
Q 023772 95 IRK-FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-EIIGG-SVDGTVRTF 171 (277)
Q Consensus 95 ~~~-~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~d~~i~i~ 171 (277)
... ...+...+..+.+.+++++.++...++.|..||. ....... ........+..+.+++. .++.+ ..++.|..|
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 209 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEF-KIPTPASGPVGITKGNDDALWFVEIIGNKIGRI 209 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe-eCCCCCCcceeEEECCCCCEEEEccCCceEEEE
Confidence 322 2234456889999999988888777889999997 4322111 12222334556666543 24444 457889999
Q ss_pred EccCCccccc---CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecC
Q 023772 172 DIRVGRELSD---DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248 (277)
Q Consensus 172 d~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 248 (277)
|. .++.... .....+.+++++++|+.+++...++.|..||. +++ +..+...........+++ +++.+.++.+
T Consensus 210 ~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~- 284 (299)
T 2z2n_A 210 TT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAME- 284 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEET-
T ss_pred CC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEec-
Confidence 98 5442211 12356889999999997666667889999998 454 334432111122344556 7777666655
Q ss_pred CCeEEEEECcCcc
Q 023772 249 DGYIYFWDLVDAS 261 (277)
Q Consensus 249 d~~i~iwd~~~~~ 261 (277)
.+.+..++..+++
T Consensus 285 ~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 285 CDKIGKLTLIKDN 297 (299)
T ss_dssp TTEEEEEEEC---
T ss_pred CCcEEEEEcCccc
Confidence 5677777877654
No 198
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.58 E-value=1.5e-12 Score=117.10 Aligned_cols=241 Identities=12% Similarity=0.080 Sum_probs=150.5
Q ss_pred ccCCcEEEEEEeCCCCEEE-----EEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCC--------
Q 023772 16 GHEGAVLAARFNGDGNYCL-----SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDR-------- 82 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~-----s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~-------- 82 (277)
+|...+..++|||||++|+ +|+.+.+|++||+.+++.+.... +......++|+ +++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 4667788999999999988 34444689999999998654311 11113578899 999998887774
Q ss_pred -----cEEEEECCCCc----eeEEeec-ccCceeEEEEecCCCEEEEEeC----CCcEEEEeCccCCCcceEeeccccCc
Q 023772 83 -----QIFYWDVSTGR----VIRKFRG-HESEVNAVKFNEYSSVVVSAGY----DQSLRAWDCRSHSTEPIQIIDSFQDS 148 (277)
Q Consensus 83 -----~v~~wd~~~~~----~~~~~~~-h~~~v~~i~~~~~~~~l~s~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~ 148 (277)
.|++|++.++. ++..... |...+.++.++|+++.++.... +..|.++|+.................
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 39999998764 3333333 5556778999999998754432 24789999876533333332222222
Q ss_pred EEEEEecCCeEE-EeecC---CcEEEEEccCCcc--c--ccCCCCCeeEEEEeCCCCEEEEEecCC---eEEEEECCCCc
Q 023772 149 VMSVCLTKTEII-GGSVD---GTVRTFDIRVGRE--L--SDDLGQPVNCISMSNDGNCILASCLDS---TLRLLDRSTGE 217 (277)
Q Consensus 149 ~~~~~~~~~~~~-~g~~d---~~i~i~d~~~~~~--~--~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~~wd~~~~~ 217 (277)
...+...+..++ ....+ +.|..+|+..+.. + ...+...+. .|++++++|+....++ .|++||+..+
T Consensus 284 ~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~- 360 (693)
T 3iuj_A 284 VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK- 360 (693)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-
Confidence 223444555544 33333 5788899876543 1 122223333 8899999887766544 6889998744
Q ss_pred eEEEEeccccceeeeeeEecCCCceEEeecCC----CeEEEEECcCccc
Q 023772 218 LLQEYKGHICKSFKTDCCLTNSDAHVTGGSED----GYIYFWDLVDASV 262 (277)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d----~~i~iwd~~~~~~ 262 (277)
..+.+.... .........++++..++....+ +.++.||+.+++.
T Consensus 361 ~~~~l~~p~-~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 361 RVREVALPG-LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEEECCSS-SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred eeEEeecCC-CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 444443211 1122233445666665544333 8899999987753
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.56 E-value=5e-13 Score=106.62 Aligned_cols=189 Identities=13% Similarity=0.160 Sum_probs=136.6
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEeeccc-CceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccc-cCc
Q 023772 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHE-SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSF-QDS 148 (277)
Q Consensus 71 ~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~-~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~ 148 (277)
.++.|++++.|+.|.+||.++|+.+.++..+. ..+.++.+.|++++++ +.++.|..||. +.. .+..+... ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~--~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR--ELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC--EEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC--EEEEEcCCCCcc
Confidence 45789999999999999999999999998776 4788999999999988 45788999997 432 22222221 123
Q ss_pred EEEEEec--CCeEEEeec-CCcEEEEEccCCccccc-----C---CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCc
Q 023772 149 VMSVCLT--KTEIIGGSV-DGTVRTFDIRVGRELSD-----D---LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGE 217 (277)
Q Consensus 149 ~~~~~~~--~~~~~~g~~-d~~i~i~d~~~~~~~~~-----~---~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~ 217 (277)
+..+.+. ++.+++.+. ++.+..+|. .++.+.. . .......+++.++|+++++...++.|..||.. |+
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 4444443 445666555 566666664 3432211 0 01234556789999999999999999999998 99
Q ss_pred eEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 218 LLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
.+..+..... .......+++..+++++.++.|..+|..+|+.+-++..+
T Consensus 157 ~~w~~~~~~~---~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 157 LLNSVKLSGT---PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp EEEEEECSSC---CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred EEEEEECCCC---ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 9998876421 223455688899998888889999999999998887643
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=1.4e-11 Score=107.65 Aligned_cols=248 Identities=13% Similarity=0.086 Sum_probs=164.8
Q ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEcCC--CCeeEEEEeccCccEEEEEEc----CCCCEEEEEe-CCCcEEEEECCCC
Q 023772 20 AVLAARFNGDGNYCLSCGKDRTIRLWNPH--RGIHIKTYKSHGREVRDVHVT----ADNSKLISCG-GDRQIFYWDVSTG 92 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~h~~~v~~~~~~----~~~~~l~t~s-~d~~v~~wd~~~~ 92 (277)
.+..+.|+|||+++++++.|+.|.+||+. +++.+.++... .....++|+ |++++++++. .++++.++|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 45689999999999999999999999995 77778887754 356899999 6999887765 4699999999888
Q ss_pred ceeEEeec----------ccC---------------------------------------------ceeEEEEecCCCEE
Q 023772 93 RVIRKFRG----------HES---------------------------------------------EVNAVKFNEYSSVV 117 (277)
Q Consensus 93 ~~~~~~~~----------h~~---------------------------------------------~v~~i~~~~~~~~l 117 (277)
+++..+.- |.. ....+.|+++++++
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~ 356 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF 356 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEE
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEE
Confidence 77665431 101 12245688888887
Q ss_pred EEEe-CCCcEEEEeCccCCCcceEee-c--cccC-cEEEEEecCCeE-EEee-cCCcEEEEEccCC-------cccccC-
Q 023772 118 VSAG-YDQSLRAWDCRSHSTEPIQII-D--SFQD-SVMSVCLTKTEI-IGGS-VDGTVRTFDIRVG-------RELSDD- 182 (277)
Q Consensus 118 ~s~~-~d~~i~iwd~~~~~~~~~~~~-~--~~~~-~~~~~~~~~~~~-~~g~-~d~~i~i~d~~~~-------~~~~~~- 182 (277)
+.+. .+++|.++|..+......... . .|+. .+..+......+ +++. .+++|.++|.... +.+...
T Consensus 357 ~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~ 436 (567)
T 1qks_A 357 ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFP 436 (567)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEe
Confidence 6654 678899999886543222222 1 1222 233233332334 3443 4689999998762 222111
Q ss_pred -CCCCeeEEEEeCCCCEEEEEec-------CCeEEEEECCCC-----c-eEEEEe-c----c-ccceeeeeeEecCCCce
Q 023772 183 -LGQPVNCISMSNDGNCILASCL-------DSTLRLLDRSTG-----E-LLQEYK-G----H-ICKSFKTDCCLTNSDAH 242 (277)
Q Consensus 183 -~~~~v~~~~~s~~~~~l~~~~~-------d~~i~~wd~~~~-----~-~~~~~~-~----~-~~~~~~~~~~~~~~~~~ 242 (277)
.+..-.-+.++|+++++.+... .++|.++|..+. . ....+. + - ..........++++|++
T Consensus 437 ~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 516 (567)
T 1qks_A 437 ALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTE 516 (567)
T ss_dssp CSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSE
T ss_pred cCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCE
Confidence 1222234678999999888652 358999998765 2 112222 0 0 01123455678999987
Q ss_pred EEee--c---CCCeEEEEECcCccceeeecc
Q 023772 243 VTGG--S---EDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 243 l~sg--s---~d~~i~iwd~~~~~~~~~~~~ 268 (277)
+..+ + .++.|.++|..+++++++++.
T Consensus 517 ~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 517 VWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp EEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred EEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 6654 2 478999999999999999885
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.55 E-value=1.4e-12 Score=117.30 Aligned_cols=239 Identities=8% Similarity=-0.061 Sum_probs=146.2
Q ss_pred eCCCCEEEEEeCCC---cEEEEc--CCCCeeEEEEe------ccCccEEEEEEcCCCCEEE-----EEeCCCcEEEEECC
Q 023772 27 NGDGNYCLSCGKDR---TIRLWN--PHRGIHIKTYK------SHGREVRDVHVTADNSKLI-----SCGGDRQIFYWDVS 90 (277)
Q Consensus 27 ~~~~~~l~s~s~d~---~v~iwd--~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~-----t~s~d~~v~~wd~~ 90 (277)
+++|++++-...++ .-.+|. ...+.....+. +|...+.++.|+|++++|+ .|+.+.+|++||++
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37888888665554 345564 33443333322 3555799999999999998 44556789999999
Q ss_pred CCceeEEeecccCce--eEEEEecCCCEEEEEeCCCc-------------EEEEeCccCCCcceEeecc--ccCcEEEEE
Q 023772 91 TGRVIRKFRGHESEV--NAVKFNEYSSVVVSAGYDQS-------------LRAWDCRSHSTEPIQIIDS--FQDSVMSVC 153 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v--~~i~~~~~~~~l~s~~~d~~-------------i~iwd~~~~~~~~~~~~~~--~~~~~~~~~ 153 (277)
+++.+. ..+...+ ..+.|+|+++.|+.++.|.. |++|++.+...+...+... +...+..+.
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 988651 1121222 67899999999999998876 9999987654332333332 233455566
Q ss_pred ecC--CeEEEeecCC----cEEEEEccCCcccc-cCCCCCeeEEEEeCCCCEEEEEe---cCCeEEEEECCCCce--EEE
Q 023772 154 LTK--TEIIGGSVDG----TVRTFDIRVGRELS-DDLGQPVNCISMSNDGNCILASC---LDSTLRLLDRSTGEL--LQE 221 (277)
Q Consensus 154 ~~~--~~~~~g~~d~----~i~i~d~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~---~d~~i~~wd~~~~~~--~~~ 221 (277)
+++ ..++..+.++ .|.++|...++... ......+....+ ++|.+++.+. .++.|.+||+.++.. .+.
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKE 312 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEE
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeE
Confidence 655 4466666555 56666654432211 112223444445 5566444443 357899999987653 233
Q ss_pred EeccccceeeeeeEecCCCceEEeecCCCeEEEEECc-CccceeeeccC
Q 023772 222 YKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV-DASVVAKFKAH 269 (277)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~-~~~~~~~~~~h 269 (277)
+..+..........++ ++.++++...|+..++|.+. +++....+..+
T Consensus 313 l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 313 IVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLP 360 (695)
T ss_dssp EECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCS
T ss_pred EecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCC
Confidence 3333211222334455 67788899999998888765 46555666544
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.55 E-value=2.6e-13 Score=112.47 Aligned_cols=168 Identities=13% Similarity=0.088 Sum_probs=130.6
Q ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe-----------eEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 20 AVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-----------HIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~-----------~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
++..+++++...++++|+.| .+++|++.... ..... .+.. |+.++| +++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 58899999999999999997 56669754322 11223 3556 999999 88888888 889999999
Q ss_pred CCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecCCcE
Q 023772 89 VSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTV 168 (277)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i 168 (277)
+.+.........|+.++.++.+.+. .++.++.||++.+||+....... ....+.+++++++.++.|..||++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~------~~~~Vs~v~WSpkG~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ------LAQNVTSFDVTNSQLAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE------EEESEEEEEECSSEEEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc------ccCCceEEEEcCCceEEEEcCCcE
Confidence 9877666667778888988777654 38889999999999998654321 334788999999999999999999
Q ss_pred EEEEccCCcc-----cc------c--CCCCCeeEEEEeCCCCEEEE
Q 023772 169 RTFDIRVGRE-----LS------D--DLGQPVNCISMSNDGNCILA 201 (277)
Q Consensus 169 ~i~d~~~~~~-----~~------~--~~~~~v~~~~~s~~~~~l~~ 201 (277)
++|+....+. +. . .+...|.++.|.+++.++++
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9998876552 21 1 13567999999999988876
No 203
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=9.1e-13 Score=104.33 Aligned_cols=197 Identities=6% Similarity=-0.007 Sum_probs=137.9
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEe-ccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeE
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK-SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIR 96 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~ 96 (277)
...+.+++++++|+++++.. ++.|.+||...+.. ..+. .....+..+++.++++.+++...++.|.+|+..+.....
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV 143 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE
T ss_pred cCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe
Confidence 34677899999999776666 88999999876543 2332 233578999999999888887778899999866554332
Q ss_pred EeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC-e-EEEeecCCcEEEEEcc
Q 023772 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-E-IIGGSVDGTVRTFDIR 174 (277)
Q Consensus 97 ~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~d~~i~i~d~~ 174 (277)
........+.++++.++++++++...++.|.+||...... .............+.++++ . +++...++.|.+||..
T Consensus 144 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ--VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE--EECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce--EeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 2223334667899999999888877788999999765321 1111111234566666654 3 4444557899999986
Q ss_pred CCcccccCC--CCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCce
Q 023772 175 VGRELSDDL--GQPVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218 (277)
Q Consensus 175 ~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~ 218 (277)
......... ...+.+++++++|+.+++...++.|+++++...+.
T Consensus 222 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 222 STTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 543322221 24688999999999888888999999999876543
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=1.4e-10 Score=92.92 Aligned_cols=239 Identities=10% Similarity=0.015 Sum_probs=161.4
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEE-EeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKT-YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRV 94 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~ 94 (277)
.....+.++.++++|++.++...++.|.+||.. ++.... +..+...+.++++.+++...++...++.|..||.. ++.
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 345678899999999988887788999999987 554332 22234678999999999888877778899999988 554
Q ss_pred eE-EeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCe-EEEe-ecCCcEEEE
Q 023772 95 IR-KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTE-IIGG-SVDGTVRTF 171 (277)
Q Consensus 95 ~~-~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g-~~d~~i~i~ 171 (277)
.. ........+.++++.++++++++...++.|..+|.. ...... ...........+..+++. ++.+ ..++.|..|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~-~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEY-DLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEE-ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEc-cCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 32 222234678899999999988887778899999875 322111 112123345566665432 4444 446789999
Q ss_pred EccCCccccc---CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecC
Q 023772 172 DIRVGRELSD---DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSE 248 (277)
Q Consensus 172 d~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 248 (277)
|. .++.... .....+..++++++|+.+++....+.|..||. +++... +............++.+++.+.++...
T Consensus 173 ~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 173 TN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred CC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCCCCCCceEEEECCCCCEEEeccC
Confidence 87 4332211 12346789999999987777767788999998 555443 221111223445667788887777667
Q ss_pred CCeEEEEECcCccc
Q 023772 249 DGYIYFWDLVDASV 262 (277)
Q Consensus 249 d~~i~iwd~~~~~~ 262 (277)
++.|..||. +++.
T Consensus 250 ~~~i~~~~~-~g~~ 262 (300)
T 2qc5_A 250 ANQIGRITN-DNTI 262 (300)
T ss_dssp TTEEEEECT-TSCE
T ss_pred CCeEEEECC-CCcE
Confidence 789999998 4543
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.53 E-value=9.9e-12 Score=104.38 Aligned_cols=237 Identities=11% Similarity=0.059 Sum_probs=159.4
Q ss_pred EEEEeCCCCEEEEEe----------CCCcEEEEcCCCCeeEEEEecc-------CccEEEEEEcCCCCEEEEEeC--CCc
Q 023772 23 AARFNGDGNYCLSCG----------KDRTIRLWNPHRGIHIKTYKSH-------GREVRDVHVTADNSKLISCGG--DRQ 83 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~t~s~--d~~ 83 (277)
.+.++|||++++.+. .++.|.++|..+++.+.++.-. ......+.++|++++++.+.. +++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999888775 4679999999999988887532 234568999999999998864 578
Q ss_pred EEEEECCCCceeEEeecccCceeEEEEecC-CCEEEEEeCCCcEEEEeCccCCCcce--EeeccccCc---EEEEEecCC
Q 023772 84 IFYWDVSTGRVIRKFRGHESEVNAVKFNEY-SSVVVSAGYDQSLRAWDCRSHSTEPI--QIIDSFQDS---VMSVCLTKT 157 (277)
Q Consensus 84 v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~---~~~~~~~~~ 157 (277)
|.+.|+.+++.+.++.--.. ....|+ ...+++.+.||++.+.+......... ..+.....+ ...+...+.
T Consensus 202 VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 99999999998887763221 122232 24556666777777777633221100 001100111 112233445
Q ss_pred eEEEeecCCcEEEEEccCCccc-----ccC---------CCCCeeEEEEeCCCCEEEEEec----------CCeEEEEEC
Q 023772 158 EIIGGSVDGTVRTFDIRVGREL-----SDD---------LGQPVNCISMSNDGNCILASCL----------DSTLRLLDR 213 (277)
Q Consensus 158 ~~~~g~~d~~i~i~d~~~~~~~-----~~~---------~~~~v~~~~~s~~~~~l~~~~~----------d~~i~~wd~ 213 (277)
.++.....+.+.+.|+...... ... .......++++|+++.++.... ++.|.++|.
T Consensus 278 ~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 278 RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 5555566788989888543211 000 0112234789999887766542 357999999
Q ss_pred CCCceEEEEeccccceeeeeeEecCCCc-eEEeec-CCCeEEEEECcCccceeee
Q 023772 214 STGELLQEYKGHICKSFKTDCCLTNSDA-HVTGGS-EDGYIYFWDLVDASVVAKF 266 (277)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs-~d~~i~iwd~~~~~~~~~~ 266 (277)
.+.+.+..+.... ......++++++ ++++.. .++.|.++|..+++.++++
T Consensus 358 ~T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 358 ETGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9999998886432 345567899998 777665 6999999999999999997
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.51 E-value=1.5e-12 Score=107.88 Aligned_cols=170 Identities=14% Similarity=0.197 Sum_probs=126.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-----------eeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEe
Q 023772 62 EVRDVHVTADNSKLISCGGDRQIFYWDVSTGR-----------VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWD 130 (277)
Q Consensus 62 ~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~-----------~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd 130 (277)
+++.+++++...++++|+.+ .+++|+++..+ .... ..+.. |..++| +++.|+.+ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68999999999999999998 56679875432 1122 23666 999999 88888888 889999999
Q ss_pred CccCCCcceEeeccccCcEEEEEecCCeEEEeecCCcEEEEEccCCcccccCCCCCeeEEEEeCCCCEEEEEecCCeEEE
Q 023772 131 CRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRL 210 (277)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~ 210 (277)
+++... ......+...+..+.+.+..+++++.||.|.+||+..+.... ....|+|++|||+| ++.|..||.+++
T Consensus 113 v~sl~~--~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~--~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 113 LEELSE--FRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ--LAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp SSSTTC--EEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE--EEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred chhhhc--cCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc--ccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 876542 222334455566766666669999999999999998665432 44689999999999 688999999999
Q ss_pred EECCCCce--EEEEe---------ccccceeeeeeEecCCCceEEe
Q 023772 211 LDRSTGEL--LQEYK---------GHICKSFKTDCCLTNSDAHVTG 245 (277)
Q Consensus 211 wd~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~l~s 245 (277)
|+...+.. .+++. +| .......++.+++.++++
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~--~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVE--EYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTT--TSEEEEEEESSSSEEEEE
T ss_pred EcCCCccccccceecCCcccccccCC--CeeEEEEEEecCCeEEEE
Confidence 99877664 45551 13 244566677778887775
No 207
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.49 E-value=2.6e-14 Score=118.86 Aligned_cols=191 Identities=14% Similarity=0.052 Sum_probs=111.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEE
Q 023772 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVM 150 (277)
Q Consensus 71 ~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 150 (277)
++.++++++.|+.|..||.++|+.+.++.. .++.+..+..++.++++++.|+.++.||..+++......... ...+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~-~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI-PELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH-HHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC-ccccc
Confidence 567899999999999999999999988876 455555556677788888899999999987654321111110 00000
Q ss_pred -EEEe-cCCeEEEeecCCcEEEEEccCCcccccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccc
Q 023772 151 -SVCL-TKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228 (277)
Q Consensus 151 -~~~~-~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 228 (277)
.... ....+++|+.|+.+..||..+++......... ...++|++..+++++.|+.|+.||.++++.+..+.....
T Consensus 85 ~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~- 161 (369)
T 2hz6_A 85 ASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY- 161 (369)
T ss_dssp TCSCC-----CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE-
T ss_pred cCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc-
Confidence 0011 23457778889999999999887654322111 234567888899999999999999999988766653211
Q ss_pred eeeeeeEecCCC---ceEEeecCCCeEEEEECcCccceeeeccCc
Q 023772 229 SFKTDCCLTNSD---AHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270 (277)
Q Consensus 229 ~~~~~~~~~~~~---~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~ 270 (277)
...++..+. ..++.++.||.|+.||..+|+.+-+++..+
T Consensus 162 ---~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 203 (369)
T 2hz6_A 162 ---AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS 203 (369)
T ss_dssp ---CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSS
T ss_pred ---cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence 112223321 457778899999999999999887766433
No 208
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.48 E-value=9.1e-12 Score=111.39 Aligned_cols=237 Identities=13% Similarity=0.091 Sum_probs=159.0
Q ss_pred CCEEEEEeCCCcEEEEcCCCCeeEEEEecc-C----ccEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCceeEEe
Q 023772 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSH-G----REVRDVHVTADNSKLISCGG------DRQIFYWDVSTGRVIRKF 98 (277)
Q Consensus 30 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~----~~v~~~~~~~~~~~l~t~s~------d~~v~~wd~~~~~~~~~~ 98 (277)
+..++.++.|+.|..+|..+|+.+-.+..+ . ..+.+.-... +..++.++. ++.|..+|.++|+.+.++
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 567888899999999999999998888754 2 1222211112 345555543 799999999999998777
Q ss_pred ecccCc--------------------------------eeEEEEecCCCEEEEEeCCC-------------------cEE
Q 023772 99 RGHESE--------------------------------VNAVKFNEYSSVVVSAGYDQ-------------------SLR 127 (277)
Q Consensus 99 ~~h~~~--------------------------------v~~i~~~~~~~~l~s~~~d~-------------------~i~ 127 (277)
...... ...+.+.+++.+++.++.++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 542211 13467888888888887764 488
Q ss_pred EEeCccCCCcceEeeccc--------cCcE-EEEEecC---CeEEEeecCCcEEEEEccCCcccccCC------------
Q 023772 128 AWDCRSHSTEPIQIIDSF--------QDSV-MSVCLTK---TEIIGGSVDGTVRTFDIRVGRELSDDL------------ 183 (277)
Q Consensus 128 iwd~~~~~~~~~~~~~~~--------~~~~-~~~~~~~---~~~~~g~~d~~i~i~d~~~~~~~~~~~------------ 183 (277)
.+|..++..........+ ..++ .....++ ..++.++.+|.+.++|..+++.+....
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 888876643322222111 1111 2222344 457888999999999998887542110
Q ss_pred -CC------------------------CeeEEEEeCCCCEEEEEecC---------------------------------
Q 023772 184 -GQ------------------------PVNCISMSNDGNCILASCLD--------------------------------- 205 (277)
Q Consensus 184 -~~------------------------~v~~~~~s~~~~~l~~~~~d--------------------------------- 205 (277)
.. ....++|+|++..+++...+
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 00 11257899988887775432
Q ss_pred ----------CeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCc
Q 023772 206 ----------STLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270 (277)
Q Consensus 206 ----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~ 270 (277)
+.|..||+.+++.+..+.... . .....+...+.+++.|+.||.+++||..+++++.+++...
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~--~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS-P--WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTTEEEEEEEESS-S--CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ccccCCCCCccEEEEEeCCCCcEEeecCCCC-C--CcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 789999999999988775431 1 1122345567788889999999999999999999988443
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.47 E-value=4.8e-10 Score=89.69 Aligned_cols=233 Identities=6% Similarity=0.006 Sum_probs=152.9
Q ss_pred cCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEE-EeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee
Q 023772 17 HEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKT-YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVI 95 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~ 95 (277)
+...+..+.++++|.+.++...++.|..||.. ++.... .......+.++++.+++..+++...++.|..+|.+ ++..
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 34678899999999988887778899999987 554322 22234678999999999888887778899999987 5544
Q ss_pred E-EeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC-eEEEee-cCCcEEEEE
Q 023772 96 R-KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-EIIGGS-VDGTVRTFD 172 (277)
Q Consensus 96 ~-~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~-~d~~i~i~d 172 (277)
. .+......+..+.+.+++++.++...++.|..+|. ...... .........+..+.++++ .++.+. ..+.|..||
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 2 22333457789999999998877777888999987 332211 111122234556666543 344444 456799999
Q ss_pred ccCCccccc---CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCC
Q 023772 173 IRVGRELSD---DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249 (277)
Q Consensus 173 ~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d 249 (277)
. .++.... .....+.+++++++|+.+++...++.|..||. +++.. .+............+..++|.+.++.. .
T Consensus 216 ~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~-~ 291 (300)
T 2qc5_A 216 T-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSVWFALK-C 291 (300)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCEEEECS-S
T ss_pred C-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE-EEECCccCCccceeEeCCCCCEEEEcc-C
Confidence 8 3332111 12346789999999997777666789999998 45433 332221112234456677777666554 4
Q ss_pred CeEEEEECc
Q 023772 250 GYIYFWDLV 258 (277)
Q Consensus 250 ~~i~iwd~~ 258 (277)
.|..+|.+
T Consensus 292 -~i~~~~p~ 299 (300)
T 2qc5_A 292 -KIGKLNLN 299 (300)
T ss_dssp -EEEEEEEC
T ss_pred -ceEEeCCC
Confidence 66666653
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.46 E-value=8.7e-11 Score=94.92 Aligned_cols=231 Identities=11% Similarity=0.077 Sum_probs=149.4
Q ss_pred cceeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 11 ANVLKGHEGAVLAARFNGDGN-YCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 11 ~~~l~~H~~~V~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
...+..+........|+++|+ ++++...++.|..|+. ++. ...+..+...+..++++++++.+++...++.|..|+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 334555566678899999998 6667788899999997 454 4556666778999999999987776666788999998
Q ss_pred CCCceeEEeecc-----cCceeEEEEecCCCEEEE----EeC-------------CCcEEEEeCccCCCcceEeeccccC
Q 023772 90 STGRVIRKFRGH-----ESEVNAVKFNEYSSVVVS----AGY-------------DQSLRAWDCRSHSTEPIQIIDSFQD 147 (277)
Q Consensus 90 ~~~~~~~~~~~h-----~~~v~~i~~~~~~~~l~s----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~ 147 (277)
+ ++.. .+..+ ...++.+.+.+++++.+| |.. .+.|..+|......... . ...
T Consensus 115 ~-g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~--~--~~~ 188 (305)
T 3dr2_A 115 D-GQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM--A--DLD 188 (305)
T ss_dssp T-SCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE--E--EES
T ss_pred C-CCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE--e--cCC
Confidence 6 5432 22211 234678999999998886 321 24577777654433222 1 122
Q ss_pred cEEEEEecC--CeEEEeecC------CcEEEEEccCCc-----ccccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECC
Q 023772 148 SVMSVCLTK--TEIIGGSVD------GTVRTFDIRVGR-----ELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRS 214 (277)
Q Consensus 148 ~~~~~~~~~--~~~~~g~~d------~~i~i~d~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~ 214 (277)
....+.+++ ..++.+... +.|..||+.... .+..........++++++|++. ++..+ .|.+||.
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~- 265 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS- 265 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-
Confidence 334455554 446655544 689999986432 1111112345678999999954 44444 5999998
Q ss_pred CCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEE
Q 023772 215 TGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256 (277)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd 256 (277)
.++.+..+.... ....++++++++.|..++.++ ++.++
T Consensus 266 ~g~~~~~~~~~~---~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 266 DGQLLGHIPTPG---TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp TSCEEEEEECSS---CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred CCCEEEEEECCC---ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 477777776543 245567888887777666554 43333
No 211
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.46 E-value=2e-11 Score=109.32 Aligned_cols=236 Identities=11% Similarity=0.059 Sum_probs=157.2
Q ss_pred CCEEEEEeCCCcEEEEcCCCCeeEEEEecc--C---ccEEEEEEcCCCCEEEEEe------CCCcEEEEECCCCceeEEe
Q 023772 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSH--G---REVRDVHVTADNSKLISCG------GDRQIFYWDVSTGRVIRKF 98 (277)
Q Consensus 30 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h--~---~~v~~~~~~~~~~~l~t~s------~d~~v~~wd~~~~~~~~~~ 98 (277)
+..++.++.|+.|..+|..+|+.+-.+... . ..+.+.-...++ .++.++ .++.|..||.++|+.+.++
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 457888889999999999999988776542 1 111111111144 444443 3789999999999998776
Q ss_pred eccc-------------------------------CceeEEEEecCCCEEEEEeCCCc-------------------EEE
Q 023772 99 RGHE-------------------------------SEVNAVKFNEYSSVVVSAGYDQS-------------------LRA 128 (277)
Q Consensus 99 ~~h~-------------------------------~~v~~i~~~~~~~~l~s~~~d~~-------------------i~i 128 (277)
..-. ..-..+.+.++..+++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 5210 01125778888889999888764 899
Q ss_pred EeCccCCCcceEeeccc-------cCcE--EEEEecCC---eEEEeecCCcEEEEEccCCcccccC-C------------
Q 023772 129 WDCRSHSTEPIQIIDSF-------QDSV--MSVCLTKT---EIIGGSVDGTVRTFDIRVGRELSDD-L------------ 183 (277)
Q Consensus 129 wd~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~---~~~~g~~d~~i~i~d~~~~~~~~~~-~------------ 183 (277)
+|..++..........+ .... ..+...+. .++.++.+|.+.++|.++++.+... .
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99887654322222111 1111 12233343 4778899999999999888754110 0
Q ss_pred ----------------------------CCCeeEEEEeCCCCEEEEEec-------------------------------
Q 023772 184 ----------------------------GQPVNCISMSNDGNCILASCL------------------------------- 204 (277)
Q Consensus 184 ----------------------------~~~v~~~~~s~~~~~l~~~~~------------------------------- 204 (277)
......++|+|+...+++...
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 011234789998887776532
Q ss_pred --------------CCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 205 --------------DSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 205 --------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
+|.|+.||+.+++.+..+..+... ....+...+.+++.|+.||.++.||.++|+++-+++.+
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~---~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIF---NGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSC---CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCc---cCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 378999999999998887654311 11234556778889999999999999999999888754
No 212
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.45 E-value=5.9e-11 Score=98.03 Aligned_cols=224 Identities=8% Similarity=-0.024 Sum_probs=147.7
Q ss_pred cEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEe----------CCCcEEEEECCCCceeEEeecc-------cC
Q 023772 41 TIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCG----------GDRQIFYWDVSTGRVIRKFRGH-------ES 103 (277)
Q Consensus 41 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s----------~d~~v~~wd~~~~~~~~~~~~h-------~~ 103 (277)
+|.++|..+++.+.++.....+ .+.++|++++++.+. .++.|.+||+.+++.+.++.-. ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999999876666 799999999988876 3688999999999999888643 12
Q ss_pred ceeEEEEecCCCEEEEEeC--CCcEEE--EeCccCCCcceEe---------------eccccCcEEEEEe----------
Q 023772 104 EVNAVKFNEYSSVVVSAGY--DQSLRA--WDCRSHSTEPIQI---------------IDSFQDSVMSVCL---------- 154 (277)
Q Consensus 104 ~v~~i~~~~~~~~l~s~~~--d~~i~i--wd~~~~~~~~~~~---------------~~~~~~~~~~~~~---------- 154 (277)
....+.++|++++++.+.. +..+.+ +|..+ ...+.. .....+....+..
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v 202 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV 202 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEEC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeE
Confidence 3456899999999988875 456888 88854 111100 0000000111111
Q ss_pred ------------------cCCeEEEeecCCcEEEEEccCCc-cc-c---cC------C---CCCeeEEEEeCCCCEEEEE
Q 023772 155 ------------------TKTEIIGGSVDGTVRTFDIRVGR-EL-S---DD------L---GQPVNCISMSNDGNCILAS 202 (277)
Q Consensus 155 ------------------~~~~~~~g~~d~~i~i~d~~~~~-~~-~---~~------~---~~~v~~~~~s~~~~~l~~~ 202 (277)
.+..++..+. +.+.+.|..... .+ . .. . ......+.++|+++.++.+
T Consensus 203 ~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~ 281 (368)
T 1mda_H 203 GAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp CCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred EEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEE
Confidence 1112232333 566666664321 11 0 00 0 0112237899999888765
Q ss_pred ec-C--------CeEEEEECCCCceEEEEeccccceeeeeeEecCCCce-EEeec-CCCeEEEEECcCccceeeeccCcc
Q 023772 203 CL-D--------STLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAH-VTGGS-EDGYIYFWDLVDASVVAKFKAHSL 271 (277)
Q Consensus 203 ~~-d--------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sgs-~d~~i~iwd~~~~~~~~~~~~h~~ 271 (277)
.. + +.+.++|..+++.+..+.... ......+++++++ +++.. .++.|.++|..+++.+++++....
T Consensus 282 ~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~ 358 (368)
T 1mda_H 282 TVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG 358 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC
T ss_pred eccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC
Confidence 43 2 356699999999988776432 2445678999974 45555 589999999999999999986544
Q ss_pred e
Q 023772 272 V 272 (277)
Q Consensus 272 ~ 272 (277)
+
T Consensus 359 P 359 (368)
T 1mda_H 359 P 359 (368)
T ss_dssp C
T ss_pred C
Confidence 3
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.44 E-value=4.6e-10 Score=90.34 Aligned_cols=222 Identities=11% Similarity=0.070 Sum_probs=143.8
Q ss_pred eccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Q 023772 15 KGHEGAVLAARFNGD-GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR 93 (277)
Q Consensus 15 ~~H~~~V~~~~~~~~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~ 93 (277)
..+..--.+..|+++ +.++++...++.|..||..++.. ..+. ....+.+++++++++++++. ++.|.+||.++++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQS 84 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCc
Confidence 334445678899995 45666777889999999988754 3333 35689999999999965553 5689999998876
Q ss_pred eeEEeec----ccCceeEEEEecCCCEEEEEeCC---------CcEEEEeCccCCCcceEeeccccCcEEEEEecC--Ce
Q 023772 94 VIRKFRG----HESEVNAVKFNEYSSVVVSAGYD---------QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TE 158 (277)
Q Consensus 94 ~~~~~~~----h~~~v~~i~~~~~~~~l~s~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 158 (277)
....... ....++.+.+.+++++.++...+ ..-.+|.+.... . .............+.+++ +.
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~-~~~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-H-VKKYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-C-EEEEEEEESBEEEEEECTTSCE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-C-EEEEeeccccccceEEcCCCCE
Confidence 5332221 12457889999999987765332 223455443221 1 111111222334555554 33
Q ss_pred E-EEeecCCcEEEEEcc--CCcc-----cccC--CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccc
Q 023772 159 I-IGGSVDGTVRTFDIR--VGRE-----LSDD--LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228 (277)
Q Consensus 159 ~-~~g~~d~~i~i~d~~--~~~~-----~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 228 (277)
+ ++.+.++.|..||+. .+.. +... ....+..++++++|++.++...++.|..||..+++.+..+....
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~-- 240 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV-- 240 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS--
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC--
Confidence 4 455667889999873 3321 1111 12457889999999988887788899999999999888876542
Q ss_pred eeeeeeEec-CCCceEE
Q 023772 229 SFKTDCCLT-NSDAHVT 244 (277)
Q Consensus 229 ~~~~~~~~~-~~~~~l~ 244 (277)
.....++|. |+++.|.
T Consensus 241 ~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 241 DKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp SBEEEEEEESGGGCEEE
T ss_pred CCceEEEEeCCCCCEEE
Confidence 235667787 6665443
No 214
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.44 E-value=3e-14 Score=118.54 Aligned_cols=189 Identities=12% Similarity=0.055 Sum_probs=111.5
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccC-ceeE
Q 023772 29 DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHES-EVNA 107 (277)
Q Consensus 29 ~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~-~v~~ 107 (277)
++..+++++.|+.|+.||..+|+.+-.++. +++.+..+..++..+++++.|+.++.||.++|+.+..+..+.. .+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 477899999999999999999999888876 5566666667777888888999999999999988766654321 1110
Q ss_pred EEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecCCcEEEEEccCCcccccCCCCCe
Q 023772 108 VKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPV 187 (277)
Q Consensus 108 i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~v 187 (277)
.-....+..+++++.|+.+..||..++..... +.... . ....+....+++++.|+.|..||.++++..........
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~--~~~~~-~-~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~ 161 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQT--LSSAF-A-DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY 161 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEE--ecCCC-c-ccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc
Confidence 00011345677888999999999987643222 11111 1 12222455688889999999999988875432111111
Q ss_pred eEEEEeCCC---CEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 188 NCISMSNDG---NCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 188 ~~~~~s~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
....++++. ..+++++.||.++.||..+++.+..+.
T Consensus 162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 162 AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 222333332 457788899999999999999887665
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.43 E-value=8.9e-11 Score=106.30 Aligned_cols=237 Identities=8% Similarity=-0.005 Sum_probs=143.1
Q ss_pred eCCCCEEEEEeCCCc---EEEEcC--C---CCeeEEEE------eccCccEEEEEEcCCCCEEEEEeCC-----CcEEEE
Q 023772 27 NGDGNYCLSCGKDRT---IRLWNP--H---RGIHIKTY------KSHGREVRDVHVTADNSKLISCGGD-----RQIFYW 87 (277)
Q Consensus 27 ~~~~~~l~s~s~d~~---v~iwd~--~---~~~~~~~~------~~h~~~v~~~~~~~~~~~l~t~s~d-----~~v~~w 87 (277)
+|+|++++....++. -.+|.. . .+.....+ .+|...+....|+|++++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 388998886655443 566653 2 23322211 2233478899999999999877544 469999
Q ss_pred ECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCc--------------EEEEeCccCCCcceEeecccc--CcEEE
Q 023772 88 DVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQS--------------LRAWDCRSHSTEPIQIIDSFQ--DSVMS 151 (277)
Q Consensus 88 d~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~--------------i~iwd~~~~~~~~~~~~~~~~--~~~~~ 151 (277)
|+++++.+... .+...+..+.|+|+ +.|+.++.|+. |++|++.+............. ..+..
T Consensus 195 dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 99999876531 12223357889999 88888887664 889998654432233333222 23555
Q ss_pred EEecCC--eEEEeecC-----CcEEEEEccCC--c-cc-ccCCCCCeeEEEEeCCCCEEEEEecC----CeEEEEECCCC
Q 023772 152 VCLTKT--EIIGGSVD-----GTVRTFDIRVG--R-EL-SDDLGQPVNCISMSNDGNCILASCLD----STLRLLDRSTG 216 (277)
Q Consensus 152 ~~~~~~--~~~~g~~d-----~~i~i~d~~~~--~-~~-~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~~wd~~~~ 216 (277)
+.++++ .++..+.+ ..|.+||+..+ + .. ........... ++|+|+.|+..+.+ +.|.+||+.++
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 566554 46655544 37999998765 2 11 11112223333 35888888877653 45999999874
Q ss_pred -ceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECc-Cccceeeecc
Q 023772 217 -ELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV-DASVVAKFKA 268 (277)
Q Consensus 217 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~-~~~~~~~~~~ 268 (277)
...+.+..+... ....+.+. ++.++++...|+..++|.+. +++..+.+..
T Consensus 352 ~~~~~~l~~~~~~-~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~ 403 (741)
T 1yr2_A 352 TPRFDTVVPESKD-NLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL 403 (741)
T ss_dssp SCEEEEEECCCSS-EEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC
T ss_pred ccccEEEecCCCC-eEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC
Confidence 233333333222 22333444 56778888899988887655 4666666654
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.42 E-value=2e-10 Score=94.99 Aligned_cols=239 Identities=10% Similarity=0.040 Sum_probs=158.9
Q ss_pred EEEeCCCCEEEEEeC-----CCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEe----------CCCcEEEEE
Q 023772 24 ARFNGDGNYCLSCGK-----DRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCG----------GDRQIFYWD 88 (277)
Q Consensus 24 ~~~~~~~~~l~s~s~-----d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s----------~d~~v~~wd 88 (277)
....|+++.++.... ++.|.+.|..+++.+.++.....+ . +.++|++++++.++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 445689988887755 689999999999999998876665 4 99999999887765 367899999
Q ss_pred CCCCceeEEeeccc-------CceeEEEEecCCCEEEEEeC--CCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeE
Q 023772 89 VSTGRVIRKFRGHE-------SEVNAVKFNEYSSVVVSAGY--DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEI 159 (277)
Q Consensus 89 ~~~~~~~~~~~~h~-------~~v~~i~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
..+.+.+.++.-.. ..-..+.++|++++++.+.. ++.|.++|+.+... +..+.. +............+
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v--v~tI~v-~g~~~~~P~g~~~~ 192 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF--KRMLDV-PDCYHIFPTAPDTF 192 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE--EEEEEC-CSEEEEEEEETTEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE--EEEEEC-CCcceeecCCCcee
Confidence 99999888774221 23456899999999888764 68999999986543 222221 11122223345567
Q ss_pred EEeecCCcEEEEEccC-Ccccc------cCCCCCe-eEEEEe-CCCCEEEEEecCCeEEEEECCCCc--eEEEEe---c-
Q 023772 160 IGGSVDGTVRTFDIRV-GRELS------DDLGQPV-NCISMS-NDGNCILASCLDSTLRLLDRSTGE--LLQEYK---G- 224 (277)
Q Consensus 160 ~~g~~d~~i~i~d~~~-~~~~~------~~~~~~v-~~~~~s-~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~---~- 224 (277)
++.+.||++.+.++.. ++... .....++ ....|. ++|++++ .+.+|.+++.|...+. .+..+. .
T Consensus 193 ~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~ 271 (386)
T 3sjl_D 193 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEA 271 (386)
T ss_dssp EEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHH
T ss_pred EEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccc
Confidence 7888899999999875 43211 1111122 224564 5776555 5568999999997654 333332 0
Q ss_pred ----cccceeeeeeEecCCCceEEeecC----------CCeEEEEECcCccceeeecc
Q 023772 225 ----HICKSFKTDCCLTNSDAHVTGGSE----------DGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 225 ----~~~~~~~~~~~~~~~~~~l~sgs~----------d~~i~iwd~~~~~~~~~~~~ 268 (277)
.....-.....++++++.+..... .+.|.+.|..++++++++.-
T Consensus 272 ~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v 329 (386)
T 3sjl_D 272 ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM 329 (386)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred cccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC
Confidence 000001122456777777666432 35799999999999998873
No 217
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.42 E-value=3.3e-10 Score=94.15 Aligned_cols=231 Identities=16% Similarity=0.134 Sum_probs=149.8
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccCce---
Q 023772 29 DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEV--- 105 (277)
Q Consensus 29 ~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v--- 105 (277)
++..++.++.|+.|..+|..+|+.+-.+...........+. +..++.++.++.+..+|.++++.+..+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 34577778889999999999998877666543222222222 4578888899999999999999887766432211
Q ss_pred --eEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccC---------cEEEEEecCCeEEEeecCCcEEEEEcc
Q 023772 106 --NAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD---------SVMSVCLTKTEIIGGSVDGTVRTFDIR 174 (277)
Q Consensus 106 --~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~d~~i~i~d~~ 174 (277)
...... +..++.++.++.+..+|..+.............. ...........++.++.++.+..+|..
T Consensus 180 ~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~ 257 (376)
T 3q7m_A 180 GESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLR 257 (376)
T ss_dssp CCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETT
T ss_pred CCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECC
Confidence 111222 3567778889999999987654322111111000 001111235567788889999999998
Q ss_pred CCcccccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEE
Q 023772 175 VGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYF 254 (277)
Q Consensus 175 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~i 254 (277)
+++............+... +..+..++.++.+..+|..+++.+.......... ...... .+..|..++.+|.++.
T Consensus 258 tG~~~w~~~~~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~-~~~~~~--~~~~l~v~~~~g~l~~ 332 (376)
T 3q7m_A 258 SGQIMWKRELGSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRL-LTSPVL--YNGNLVVGDSEGYLHW 332 (376)
T ss_dssp TCCEEEEECCCCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSC-CCCCEE--ETTEEEEECTTSEEEE
T ss_pred CCcEEeeccCCCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCc-ccCCEE--ECCEEEEEeCCCeEEE
Confidence 8876543322334444443 5568888889999999999999877665221111 111112 2457788889999999
Q ss_pred EECcCccceeeecc
Q 023772 255 WDLVDASVVAKFKA 268 (277)
Q Consensus 255 wd~~~~~~~~~~~~ 268 (277)
+|..+++++.+++.
T Consensus 333 ~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 333 INVEDGRFVAQQKV 346 (376)
T ss_dssp EETTTCCEEEEEEC
T ss_pred EECCCCcEEEEEec
Confidence 99999999877765
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=6.4e-09 Score=84.78 Aligned_cols=213 Identities=11% Similarity=0.059 Sum_probs=136.6
Q ss_pred cEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 023772 20 AVLAARFNGDG-NYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF 98 (277)
Q Consensus 20 ~V~~~~~~~~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~ 98 (277)
-..+..|++++ .++++...++.|..||..+++.. .+. ....+.++.++++++++++. .+ .|.+||.++++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 35678999975 45667777899999999887643 333 34679999999998877754 34 4999999887754322
Q ss_pred ec---c-cCceeEEEEecCCCEEEEEeCC------CcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeE-EEeecC
Q 023772 99 RG---H-ESEVNAVKFNEYSSVVVSAGYD------QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEI-IGGSVD 165 (277)
Q Consensus 99 ~~---h-~~~v~~i~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d 165 (277)
.. . ...++++.+.++++++++...+ +.|..++ ... ...+.........+.+++ +.+ ++...+
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~---~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK---VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE---EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc---EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 11 1 2368899999999987765432 3455555 221 111111112334555554 344 444557
Q ss_pred CcEEEEEcc--CC-cc-----cccC--CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeE
Q 023772 166 GTVRTFDIR--VG-RE-----LSDD--LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCC 235 (277)
Q Consensus 166 ~~i~i~d~~--~~-~~-----~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 235 (277)
+.|.+||+. .+ .. +... ....+..++++++|.+.++...++.|..||. +++.+..+.... .....++
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~--~~~~~~a 277 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG--KQTTCPA 277 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC--SBEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC--CCcEEEE
Confidence 889999985 44 21 1111 1234678999999997777777789999998 577777766442 2345667
Q ss_pred ec-CCCceEE
Q 023772 236 LT-NSDAHVT 244 (277)
Q Consensus 236 ~~-~~~~~l~ 244 (277)
++ +++..|.
T Consensus 278 f~g~d~~~L~ 287 (326)
T 2ghs_A 278 FIGPDASRLL 287 (326)
T ss_dssp EESTTSCEEE
T ss_pred EecCCCCEEE
Confidence 76 7766554
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=1.1e-09 Score=91.08 Aligned_cols=195 Identities=15% Similarity=0.082 Sum_probs=122.5
Q ss_pred EEEEeCCCCEEEEEe----------CCCcEEEEcCCCCeeEEEEecc-------CccEEEEEEcCCCCEEEEEeC--CCc
Q 023772 23 AARFNGDGNYCLSCG----------KDRTIRLWNPHRGIHIKTYKSH-------GREVRDVHVTADNSKLISCGG--DRQ 83 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~t~s~--d~~ 83 (277)
.+.|+|||++++.+. .++.|.+||..+.+.+.++... ......+.++|++++|+.+.. +++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999999875 3678999999988877776532 123568999999999998874 578
Q ss_pred EEEEECCCCceeEE-eecccCceeEEEEecCC-CEEEEEeCCCcEEEE--------------------------------
Q 023772 84 IFYWDVSTGRVIRK-FRGHESEVNAVKFNEYS-SVVVSAGYDQSLRAW-------------------------------- 129 (277)
Q Consensus 84 v~~wd~~~~~~~~~-~~~h~~~v~~i~~~~~~-~~l~s~~~d~~i~iw-------------------------------- 129 (277)
|.++| ++++.+.+ +.... . +.+.+++ ..+++.+.||.+.++
T Consensus 150 v~viD-~t~~~~~~~i~~~~-~---~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPT-C---YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCc-e---EEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecC
Confidence 99999 99988777 53211 1 1122221 222233333333333
Q ss_pred ---------------eCccCCCcceEeec----------cccCcE--EEEEecCCeEEEeec----------CCcEEEEE
Q 023772 130 ---------------DCRSHSTEPIQIID----------SFQDSV--MSVCLTKTEIIGGSV----------DGTVRTFD 172 (277)
Q Consensus 130 ---------------d~~~~~~~~~~~~~----------~~~~~~--~~~~~~~~~~~~g~~----------d~~i~i~d 172 (277)
|+..........+. ..+... ..+..++..+++... ++.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 33211100000000 001111 122223344444332 35799999
Q ss_pred ccCCccccc-CCCCCeeEEEEeCCCC-EEEEEe-cCCeEEEEECCCCceEEEE
Q 023772 173 IRVGRELSD-DLGQPVNCISMSNDGN-CILASC-LDSTLRLLDRSTGELLQEY 222 (277)
Q Consensus 173 ~~~~~~~~~-~~~~~v~~~~~s~~~~-~l~~~~-~d~~i~~wd~~~~~~~~~~ 222 (277)
..+.+.+.. ..+.....++|+|+|+ .++++. .++.|.++|..+++.++.+
T Consensus 305 ~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 305 GLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 988776443 3455688999999999 677766 5899999999999988774
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=8.3e-11 Score=96.71 Aligned_cols=228 Identities=14% Similarity=0.102 Sum_probs=141.8
Q ss_pred CcEEEEEEeCCCCEEEEEe--CCCcEEEEcCCCCeeEEEE-------eccCccEEEEEEcCCCCEEEEEeC-----CCcE
Q 023772 19 GAVLAARFNGDGNYCLSCG--KDRTIRLWNPHRGIHIKTY-------KSHGREVRDVHVTADNSKLISCGG-----DRQI 84 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~t~s~-----d~~v 84 (277)
..+..++++++|+++++.. .++.++||.+.+++. ..+ ..|-..+..++++++++.+++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6789999999999998864 234356665545543 222 124467999999999876665433 5789
Q ss_pred EEEECCCCceeEEeecc------cCceeEEEEecCC-CEEEEEe---CCCcEEEEeCccCCCcceEeeccccCc---EEE
Q 023772 85 FYWDVSTGRVIRKFRGH------ESEVNAVKFNEYS-SVVVSAG---YDQSLRAWDCRSHSTEPIQIIDSFQDS---VMS 151 (277)
Q Consensus 85 ~~wd~~~~~~~~~~~~h------~~~v~~i~~~~~~-~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~ 151 (277)
.+||+++++.++.+... ...++.+++.+++ ...++.. .++.|.+||+..... ......+... -..
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~--~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA--ARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE--EEECTTCTTTSCCSCC
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE--EEEecCCCcccccccc
Confidence 99999999877766532 2356889999764 4456655 688999999875432 2222221110 011
Q ss_pred EEecCCeEEEeecCCcEEEEEccCCcccccCCCCCeeEEEEeCCCCEEEEEecCC-eEEEEECC---CCc-----eEE--
Q 023772 152 VCLTKTEIIGGSVDGTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLDS-TLRLLDRS---TGE-----LLQ-- 220 (277)
Q Consensus 152 ~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-~i~~wd~~---~~~-----~~~-- 220 (277)
+...+..+.+...++.++.|. ..++.++|+|+|+.|..+..++ .++.++.. .+. ...
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPH------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKI 241 (343)
T ss_dssp CEETTEECBEECTTSCEECCC------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTC
T ss_pred eeECCEEEEeccCCCceecee------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcce
Confidence 222333344445566554432 2467899999999888877665 45444431 111 000
Q ss_pred EEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccce
Q 023772 221 EYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~ 263 (277)
...++. ......++.++|.+.++...++.|..||..+++..
T Consensus 242 ~~~g~~--g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~ 282 (343)
T 2qe8_A 242 ERYSEK--PICDGISIDKDHNIYVGDLAHSAIGVITSADRAYK 282 (343)
T ss_dssp EEEEEC--CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEE
T ss_pred EecccC--CCCceEEECCCCCEEEEccCCCeEEEEECCCCCEE
Confidence 011111 12234567888998888889999999999666643
No 221
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.30 E-value=7.8e-09 Score=83.08 Aligned_cols=211 Identities=12% Similarity=0.120 Sum_probs=130.1
Q ss_pred cCccEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc
Q 023772 59 HGREVRDVHVTADNS-KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE 137 (277)
Q Consensus 59 h~~~v~~~~~~~~~~-~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 137 (277)
+..-..+..|+++++ .+++...++.|..||.++++. ..+. ....+.++.+.++++++++. ++.|.+||..+....
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEE
Confidence 344556788888655 455666789999999988765 2332 45688999999999966653 567999998654332
Q ss_pred ceEeecc--ccCcEEEEEecCCe-EEEeec----------CCcEEEEEccCCcccc--cCCCCCeeEEEEeCCCCEE-EE
Q 023772 138 PIQIIDS--FQDSVMSVCLTKTE-IIGGSV----------DGTVRTFDIRVGRELS--DDLGQPVNCISMSNDGNCI-LA 201 (277)
Q Consensus 138 ~~~~~~~--~~~~~~~~~~~~~~-~~~g~~----------d~~i~i~d~~~~~~~~--~~~~~~v~~~~~s~~~~~l-~~ 201 (277)
.+..... ....+..+.++++. ++.+.. ...-.+|.+....... .......+.++|+|+++.| ++
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEe
Confidence 2221111 11234555555433 444332 1234455443221111 1112346889999999866 45
Q ss_pred EecCCeEEEEEC--CCCceE--EEEec-cccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCccee
Q 023772 202 SCLDSTLRLLDR--STGELL--QEYKG-HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSLVV 273 (277)
Q Consensus 202 ~~~d~~i~~wd~--~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~v 273 (277)
.+.++.|..||+ .++.+. +.+.. ..........++.++|++.++...++.|..||..+++++..+..+...+
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~ 243 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT 243 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc
Confidence 566789999987 455432 12211 1111233445678888877777778899999999999999888764333
No 222
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.27 E-value=3.3e-09 Score=88.10 Aligned_cols=227 Identities=11% Similarity=0.096 Sum_probs=145.1
Q ss_pred CCEEEEEeCCCcEEEEcCCCCeeEEEEeccC---------ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeec
Q 023772 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHG---------REVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRG 100 (277)
Q Consensus 30 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~ 100 (277)
+..++.++.++.|..+|..+|+.+-.+.... ..+.+. ....+..++.++.++.+..+|.++|+.+.++..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5677888889999999999998876665421 222222 222456788888999999999999998877664
Q ss_pred ccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccC---cEEEEEecCCeEEEeecCCcEEEEEccCCc
Q 023772 101 HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD---SVMSVCLTKTEIIGGSVDGTVRTFDIRVGR 177 (277)
Q Consensus 101 h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~ 177 (277)
........... +..++.++.++.+..+|..++............. ...........++.++.++.+..+|..+++
T Consensus 132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCC
T ss_pred CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCc
Confidence 43222222222 4477778899999999987654322111111000 001112235668888889999999998876
Q ss_pred ccccC-CCCC-----------e-eEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEE
Q 023772 178 ELSDD-LGQP-----------V-NCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVT 244 (277)
Q Consensus 178 ~~~~~-~~~~-----------v-~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (277)
..... ...+ + ....+ .+..+..++.++.+..+|..+++.+..+.... . ... ..++..+.
T Consensus 210 ~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~--~--~~~--~~~~~~l~ 281 (376)
T 3q7m_A 210 MIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIMWKRELGS--V--NDF--IVDGNRIY 281 (376)
T ss_dssp EEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEEEEECCCC--E--EEE--EEETTEEE
T ss_pred EEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEEeeccCCC--C--CCc--eEECCEEE
Confidence 54221 1100 1 01111 24567788889999999999999887654321 1 111 22355677
Q ss_pred eecCCCeEEEEECcCccceeeec
Q 023772 245 GGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 245 sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
.++.++.|+.+|..+++.+-+.+
T Consensus 282 ~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 282 LVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp EEETTCCEEEEETTTCCEEEEEC
T ss_pred EEcCCCeEEEEECCCCcEEEeec
Confidence 77889999999999998876654
No 223
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=2.2e-09 Score=86.58 Aligned_cols=210 Identities=10% Similarity=0.057 Sum_probs=129.9
Q ss_pred eccCccEEEEEEcCCCCEEEE-------EeCCCcEEEEECCCCceeEEee----cccCceeEEEEecC-CCEEEEEeCCC
Q 023772 57 KSHGREVRDVHVTADNSKLIS-------CGGDRQIFYWDVSTGRVIRKFR----GHESEVNAVKFNEY-SSVVVSAGYDQ 124 (277)
Q Consensus 57 ~~h~~~v~~~~~~~~~~~l~t-------~s~d~~v~~wd~~~~~~~~~~~----~h~~~v~~i~~~~~-~~~l~s~~~d~ 124 (277)
...-....+++|++++..+++ +..++.|..||..+++...... ++...+.++.+.++ ++++++.. ++
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CC
Confidence 333456789999999888877 5778899999988877543221 24567889999999 76666544 44
Q ss_pred cEEEEeCccCCCcce-Eee-cc-ccCcEEEEEecCC--eEEEeecC---------------CcEEEEEccCCcccc-cCC
Q 023772 125 SLRAWDCRSHSTEPI-QII-DS-FQDSVMSVCLTKT--EIIGGSVD---------------GTVRTFDIRVGRELS-DDL 183 (277)
Q Consensus 125 ~i~iwd~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~--~~~~g~~d---------------~~i~i~d~~~~~~~~-~~~ 183 (277)
.|.+||.. ...... ... .. ....+..+.++++ .+++...+ +.|..||.. ++... ...
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~ 170 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA 170 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence 68889976 332111 100 00 1122445555543 34443333 456666654 32211 111
Q ss_pred CCCeeEEEEe----CCCCEEEEE-ecCCeEEEEECC-CCce-----EEEEeccccceeeeeeEecCCCceEEeecCCCeE
Q 023772 184 GQPVNCISMS----NDGNCILAS-CLDSTLRLLDRS-TGEL-----LQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYI 252 (277)
Q Consensus 184 ~~~v~~~~~s----~~~~~l~~~-~~d~~i~~wd~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i 252 (277)
....+.++++ |+++.+..+ ..++.|++||.. +++. ...+.++. ......+++.++|.+.++...++.|
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH-EGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS-SCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC-CCCCCceEECCCCCEEEEEcCCCEE
Confidence 2346789999 999765444 567899999986 4442 12222211 0223446778889888877778899
Q ss_pred EEEECcCccceeeeccCc
Q 023772 253 YFWDLVDASVVAKFKAHS 270 (277)
Q Consensus 253 ~iwd~~~~~~~~~~~~h~ 270 (277)
..||..+++.+..+..+.
T Consensus 250 ~~~d~~~g~~~~~~~~~~ 267 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPF 267 (314)
T ss_dssp EEECTTCBSCSEEEECSS
T ss_pred EEEcCCCCcEeEEEeCCC
Confidence 999999888877776553
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.26 E-value=2.8e-09 Score=89.52 Aligned_cols=236 Identities=8% Similarity=-0.014 Sum_probs=154.1
Q ss_pred CCCCEEEEEeC-C----CcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEe----------CCCcEEEEECCCC
Q 023772 28 GDGNYCLSCGK-D----RTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCG----------GDRQIFYWDVSTG 92 (277)
Q Consensus 28 ~~~~~l~s~s~-d----~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s----------~d~~v~~wd~~~~ 92 (277)
++++.++.+.. + +.|.++|+.+++.+.++.....+ .+.++|++++++.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 46666665443 2 69999999999999999876656 899999999888775 3678999999999
Q ss_pred ceeEEeecc-------cCceeEEEEecCCCEEEEEeC--CCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEee
Q 023772 93 RVIRKFRGH-------ESEVNAVKFNEYSSVVVSAGY--DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGS 163 (277)
Q Consensus 93 ~~~~~~~~h-------~~~v~~i~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 163 (277)
+.+.++.-- ...-..+.++|++++++.+.. ++.|.+.|+.+.... ..+.- .............+++.+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv--~~I~v-~g~~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD--RMLDV-PDCYHIFPASPTVFYMNC 236 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE--EEEEC-CSEEEEEEEETTEEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE--EEEEc-CCceeeccCCCcEEEEEc
Confidence 988876521 123356899999999988874 578999998765432 22221 111111122234566677
Q ss_pred cCCcEEEEEccCCcccc------cCCCCCe-eEEEEeCCCCEEEEEecCCeEEEEECCCCceE--EEEec---cc---c-
Q 023772 164 VDGTVRTFDIRVGRELS------DDLGQPV-NCISMSNDGNCILASCLDSTLRLLDRSTGELL--QEYKG---HI---C- 227 (277)
Q Consensus 164 ~d~~i~i~d~~~~~~~~------~~~~~~v-~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~---~~---~- 227 (277)
.||.+.+.+...++... .....++ ..+.|++++..++.....+.+.+.|...+... ..+.. .. .
T Consensus 237 ~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~ 316 (426)
T 3c75_H 237 RDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDW 316 (426)
T ss_dssp TTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTE
T ss_pred CCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccc
Confidence 78888888885443221 1111121 23567888887777778899999998655421 22210 00 0
Q ss_pred -ceeeeeeEecCCCceEEeec----------CCCeEEEEECcCccceeeecc
Q 023772 228 -KSFKTDCCLTNSDAHVTGGS----------EDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 228 -~~~~~~~~~~~~~~~l~sgs----------~d~~i~iwd~~~~~~~~~~~~ 268 (277)
..-.....+++++..+.... .++.|.+.|..+.+.++++..
T Consensus 317 ~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v 368 (426)
T 3c75_H 317 RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL 368 (426)
T ss_dssp EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC
Confidence 00001135778877655542 145799999999999998873
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=1.7e-09 Score=88.82 Aligned_cols=220 Identities=12% Similarity=0.042 Sum_probs=139.3
Q ss_pred ccCCcEEEEEEeCCCCEEEEEeC-----CCcEEEEcCCCCeeEEEEecc------CccEEEEEEcCCCCEE-EEEe---C
Q 023772 16 GHEGAVLAARFNGDGNYCLSCGK-----DRTIRLWNPHRGIHIKTYKSH------GREVRDVHVTADNSKL-ISCG---G 80 (277)
Q Consensus 16 ~H~~~V~~~~~~~~~~~l~s~s~-----d~~v~iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l-~t~s---~ 80 (277)
+|...+..++++++|++.++-.. ++.|.+||+.+++.++.+..+ ...+..+++++++..+ ++.+ .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 56678999999999876665433 578999999999877776542 2346899999865554 5554 6
Q ss_pred CCcEEEEECCCCceeEEeecccCcee-EEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEec--CC
Q 023772 81 DRQIFYWDVSTGRVIRKFRGHESEVN-AVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KT 157 (277)
Q Consensus 81 d~~v~~wd~~~~~~~~~~~~h~~~v~-~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 157 (277)
++.|.+||+.+++..+.+..|..... ...+..++..+.+.+.|+.++.|.. .+..+.++ +.
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~----------------~~~gia~s~dg~ 207 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL----------------GVNGIVLDAENE 207 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC----------------CEEEEEECTTSC
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceec----------------ccceeEeccCCC
Confidence 78999999998887776655432111 1334456666766777887766632 12233444 33
Q ss_pred eEEEeecCC-cEEEEEccC---C----ccc----cc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEec
Q 023772 158 EIIGGSVDG-TVRTFDIRV---G----REL----SD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG 224 (277)
Q Consensus 158 ~~~~g~~d~-~i~i~d~~~---~----~~~----~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 224 (277)
.++.+..++ .+..++... + ..+ .. ........++++++|..+++...++.|.+||..+++.......
T Consensus 208 ~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~ 287 (343)
T 2qe8_A 208 WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD 287 (343)
T ss_dssp EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC
Confidence 466555554 444444321 0 000 00 0112456799999999999988999999999966664333322
Q ss_pred cccceeeeeeEecCCCceEEeecCCCeE
Q 023772 225 HICKSFKTDCCLTNSDAHVTGGSEDGYI 252 (277)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~sgs~d~~i 252 (277)
........+++.+++.++++.+..+.+
T Consensus 288 -~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 288 -EKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp -GGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred -CceecCCeeEECCCCcEEEEeCccccc
Confidence 122345667788888777666544333
No 226
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.23 E-value=1.2e-08 Score=85.78 Aligned_cols=199 Identities=10% Similarity=0.036 Sum_probs=131.0
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCC--cEEEEeCccCCCcc
Q 023772 61 REVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ--SLRAWDCRSHSTEP 138 (277)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~ 138 (277)
.....++|+++++.+++...++.|+.||.+++++...... ..... ++++++++.++.+..++ .|..++........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 3578999999998778777789999999988776654443 23334 89999999988888866 78888875432211
Q ss_pred eE-ee-ccccCcEEEEEecC--CeEEEeecCCcEEEEEccCCccccc----CC-C--CC-eeEEEEeCC-CCEEEEEecC
Q 023772 139 IQ-II-DSFQDSVMSVCLTK--TEIIGGSVDGTVRTFDIRVGRELSD----DL-G--QP-VNCISMSND-GNCILASCLD 205 (277)
Q Consensus 139 ~~-~~-~~~~~~~~~~~~~~--~~~~~g~~d~~i~i~d~~~~~~~~~----~~-~--~~-v~~~~~s~~-~~~l~~~~~d 205 (277)
.. .. .........+.+++ ..++....++.|..||...+..... .. . .. .+.++|+|+ +..+++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 11 00 10122233444444 3466666678899999876542211 11 1 11 238999995 6666666778
Q ss_pred CeEEEEECCCCceEEEEeccc-------------cceeeeeeEecCCCceEEeec-CCCeEEEEECcCccce
Q 023772 206 STLRLLDRSTGELLQEYKGHI-------------CKSFKTDCCLTNSDAHVTGGS-EDGYIYFWDLVDASVV 263 (277)
Q Consensus 206 ~~i~~wd~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~sgs-~d~~i~iwd~~~~~~~ 263 (277)
+.|+.|+.... +..+.++. ........++.+++.+.++-+ .++.|+.|+..++++.
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE
Confidence 89999998643 33343331 012345567889998888878 8999999998887643
No 227
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.18 E-value=4.1e-09 Score=94.19 Aligned_cols=237 Identities=12% Similarity=0.130 Sum_probs=152.4
Q ss_pred CCEEEEEeCCCcEEEEcCCCCeeEEEEeccC----ccEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCceeEEee
Q 023772 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHG----REVRDVHVTADNSKLISCGG------DRQIFYWDVSTGRVIRKFR 99 (277)
Q Consensus 30 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~t~s~------d~~v~~wd~~~~~~~~~~~ 99 (277)
+..++.++.|+.|..+|..+|+.+-.+.... ..+.+.-...+ ..++.+.. ++.|..+|.++|+++.++.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEEC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4567788889999999999999887776421 11111111113 45555432 5899999999999988775
Q ss_pred cc---c----------------------------CceeEEEEecCCCEEEEEeCCCc-------------------EEEE
Q 023772 100 GH---E----------------------------SEVNAVKFNEYSSVVVSAGYDQS-------------------LRAW 129 (277)
Q Consensus 100 ~h---~----------------------------~~v~~i~~~~~~~~l~s~~~d~~-------------------i~iw 129 (277)
.. . .....+.+.++..+++.++.++. |..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 0 01124678888888888877763 8888
Q ss_pred eCccCCCcceEeecccc-------CcE--EEEEecCC---eEEEeecCCcEEEEEccCCcccccC--------------C
Q 023772 130 DCRSHSTEPIQIIDSFQ-------DSV--MSVCLTKT---EIIGGSVDGTVRTFDIRVGRELSDD--------------L 183 (277)
Q Consensus 130 d~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~---~~~~g~~d~~i~i~d~~~~~~~~~~--------------~ 183 (277)
|..++..........+. ... ..+..++. .++.++.+|.+.++|..+++.+... .
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 88776543222221111 111 22333443 4788889999999999888754110 0
Q ss_pred CC------------------------CeeEEEEeCCCCEEEEEe------------------------------------
Q 023772 184 GQ------------------------PVNCISMSNDGNCILASC------------------------------------ 203 (277)
Q Consensus 184 ~~------------------------~v~~~~~s~~~~~l~~~~------------------------------------ 203 (277)
.. ....++++|+...+....
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 00 112367888766655421
Q ss_pred cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCc
Q 023772 204 LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHS 270 (277)
Q Consensus 204 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~ 270 (277)
.+|.|+.||+.+++.+..+..... . ....+...+.+++.|+.|+.++.||.++|+.+.+++...
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~-~--~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTH-W--NGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSS-C--CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ccceEEEEeCCCCcEEEEccCCCC-C--cCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 247899999999999877654321 1 112234457788889999999999999999998887543
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.17 E-value=1.3e-08 Score=87.89 Aligned_cols=234 Identities=12% Similarity=0.104 Sum_probs=152.2
Q ss_pred CCCCEEEEEeC-CCcEEEEcCCCCeeEEEEecc-CccEEEEEE-c-CCCCEEEEEe------------------CCCcEE
Q 023772 28 GDGNYCLSCGK-DRTIRLWNPHRGIHIKTYKSH-GREVRDVHV-T-ADNSKLISCG------------------GDRQIF 85 (277)
Q Consensus 28 ~~~~~l~s~s~-d~~v~iwd~~~~~~~~~~~~h-~~~v~~~~~-~-~~~~~l~t~s------------------~d~~v~ 85 (277)
+||++++.+.. +..|.+.|+.+.++.+.+.-. ...+..+++ . |++++++.++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 38888886544 567999999999988865432 245888888 4 8999998884 246899
Q ss_pred EEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCC--------------------------------------cEE
Q 023772 86 YWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ--------------------------------------SLR 127 (277)
Q Consensus 86 ~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~--------------------------------------~i~ 127 (277)
+.|.++.++..++.--. .-..++++++++++++++.+. .|.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999998888776322 335588999999998888653 233
Q ss_pred EEeCccCCCcc-eEee-ccccCcEEEEEecCCe-EEEeecCCcEEEEEccCCcc-----------c--ccCCCCCeeEEE
Q 023772 128 AWDCRSHSTEP-IQII-DSFQDSVMSVCLTKTE-IIGGSVDGTVRTFDIRVGRE-----------L--SDDLGQPVNCIS 191 (277)
Q Consensus 128 iwd~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~-~~~g~~d~~i~i~d~~~~~~-----------~--~~~~~~~v~~~~ 191 (277)
+.|.++..... +..+ ......-..+++++.. ++++..+.++.++|+.+.+. + ....+.....++
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 44433310001 1111 0111111233334454 45666788999999986531 1 123356788999
Q ss_pred EeCCCCEEEEEecCCeEEEEECCC----------CceEEEEeccccce---eeeeeEecCCCceEEee---cCCCeE---
Q 023772 192 MSNDGNCILASCLDSTLRLLDRST----------GELLQEYKGHICKS---FKTDCCLTNSDAHVTGG---SEDGYI--- 252 (277)
Q Consensus 192 ~s~~~~~l~~~~~d~~i~~wd~~~----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~sg---s~d~~i--- 252 (277)
|+|+|..+++...|++|..||+.+ .+.+..+..|.... ......+++||++|++. +.|+.+
T Consensus 338 F~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~g 417 (595)
T 1fwx_A 338 FDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVG 417 (595)
T ss_dssp ECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCC
T ss_pred ECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCC
Confidence 999995556677899999999876 45666666553211 11112457999999875 557642
Q ss_pred -------EEEECcCccc
Q 023772 253 -------YFWDLVDASV 262 (277)
Q Consensus 253 -------~iwd~~~~~~ 262 (277)
.++|+..+++
T Consensus 418 p~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 418 PLKPENDQLIDISGDKM 434 (595)
T ss_dssp SSCCEEEEEEECSSSSC
T ss_pred CCCCCcceEEEcCCCcE
Confidence 7899976553
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.16 E-value=8.7e-09 Score=83.11 Aligned_cols=195 Identities=12% Similarity=0.079 Sum_probs=120.3
Q ss_pred ceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEecc----CccEEEEEEcCCCCEEEE----EeC---
Q 023772 12 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH----GREVRDVHVTADNSKLIS----CGG--- 80 (277)
Q Consensus 12 ~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~t----~s~--- 80 (277)
..+..+.+.+..+.++++|+++++...++.|.+|+.. ++........ ...++.+.+.+++...+| |..
T Consensus 79 ~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 79 DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 3455566778999999999977666666889999976 5432222111 124678999999998887 332
Q ss_pred ----------CCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCC------CcEEEEeCccCCCcceEee-c
Q 023772 81 ----------DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYD------QSLRAWDCRSHSTEPIQII-D 143 (277)
Q Consensus 81 ----------d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~-~ 143 (277)
.+.|..+|.++++..... .....+.++|+|+++.++.+... +.|..|++..........+ .
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~ 235 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS 235 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEEC
T ss_pred cccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEE
Confidence 256788887767654332 44456789999999977766654 6899998764321111111 1
Q ss_pred cccCcEEEEEecCC-eEEEeecCCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEE
Q 023772 144 SFQDSVMSVCLTKT-EIIGGSVDGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLD 212 (277)
Q Consensus 144 ~~~~~~~~~~~~~~-~~~~g~~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd 212 (277)
........+..+++ .++++..++ |.+||.. ++.+.. .....+.+++|+++++.|..++.++ ++.++
T Consensus 236 ~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~~-g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 236 VPDGLPDGFCVDRGGWLWSSSGTG-VCVFDSD-GQLLGHIPTPGTASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp CSSSCCCSEEECTTSCEEECCSSE-EEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred CCCCCCCeEEECCCCCEEEecCCc-EEEECCC-CCEEEEEECCCceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 11111122333332 255665444 8889974 332221 2233578899999998888877664 44433
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.10 E-value=1.7e-07 Score=78.29 Aligned_cols=217 Identities=17% Similarity=0.143 Sum_probs=136.5
Q ss_pred CCCCEEE-EEeCCCcEEEEcCCCC----eeEEEEe------ccC-ccEEEEEEcCCCCEEEEEeCC------CcEEEEEC
Q 023772 28 GDGNYCL-SCGKDRTIRLWNPHRG----IHIKTYK------SHG-REVRDVHVTADNSKLISCGGD------RQIFYWDV 89 (277)
Q Consensus 28 ~~~~~l~-s~s~d~~v~iwd~~~~----~~~~~~~------~h~-~~v~~~~~~~~~~~l~t~s~d------~~v~~wd~ 89 (277)
.++++|+ ++..+..|.|+|+.+. +..++++ ... .....+...|++ .++++..+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7777666 6788899999998755 5666663 112 255678889999 77776555 78999999
Q ss_pred CCCceeEEeecccCc---eeEEEEecCCCEEEEEe-------------------CCCcEEEEeCccCCCcceEeeccc-c
Q 023772 90 STGRVIRKFRGHESE---VNAVKFNEYSSVVVSAG-------------------YDQSLRAWDCRSHSTEPIQIIDSF-Q 146 (277)
Q Consensus 90 ~~~~~~~~~~~h~~~---v~~i~~~~~~~~l~s~~-------------------~d~~i~iwd~~~~~~~~~~~~~~~-~ 146 (277)
++.+++.++..-..+ -..+-|+|+++.+++.. .+.+|.+||+.... ..+.+... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg~~ 249 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLGEE 249 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESCTT
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecCCC
Confidence 999999888633222 23467799999888874 37899999997642 23333221 1
Q ss_pred -CcEEEEE--ecCC--eE-EEee-----cCCcEEEEEccCCc-----cc--cc-----C----------CCCCeeEEEEe
Q 023772 147 -DSVMSVC--LTKT--EI-IGGS-----VDGTVRTFDIRVGR-----EL--SD-----D----------LGQPVNCISMS 193 (277)
Q Consensus 147 -~~~~~~~--~~~~--~~-~~g~-----~d~~i~i~d~~~~~-----~~--~~-----~----------~~~~v~~~~~s 193 (277)
.....+. ++++ .+ ++.. .+++|.+|....+. .+ .. . .......+.+|
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 1122222 2443 33 3444 56677654432221 00 00 0 02346788999
Q ss_pred CCCCEEEEEe-cCCeEEEEECCC---CceEEEEeccc------------cceeeeeeEecCCCceEEeec
Q 023772 194 NDGNCILASC-LDSTLRLLDRST---GELLQEYKGHI------------CKSFKTDCCLTNSDAHVTGGS 247 (277)
Q Consensus 194 ~~~~~l~~~~-~d~~i~~wd~~~---~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~sgs 247 (277)
+||++|.++. ..+.|.+||+.. .+++....-.. .........++++|++|..+.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999887665 477999999852 34554443210 001245567899999988776
No 231
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.10 E-value=7.4e-08 Score=78.45 Aligned_cols=203 Identities=12% Similarity=0.027 Sum_probs=122.3
Q ss_pred cEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceE
Q 023772 62 EVRDVHVTADNS-KLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQ 140 (277)
Q Consensus 62 ~v~~~~~~~~~~-~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 140 (277)
-.....|+++++ .+++...++.|..||.++++.. .+. ....+.++.+.++++++++. .++ |.+||..+.......
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~g-l~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DDG-LFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TTE-EEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CCC-EEEEECCCCcEEEEe
Confidence 345678888755 4556667889999999887643 333 35678999999999887764 444 999998654332221
Q ss_pred eecc-c-cCcEEEEEecCCe-EEEeec-------CCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEE-EecCCeE
Q 023772 141 IIDS-F-QDSVMSVCLTKTE-IIGGSV-------DGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILA-SCLDSTL 208 (277)
Q Consensus 141 ~~~~-~-~~~~~~~~~~~~~-~~~g~~-------d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~-~~~d~~i 208 (277)
.... . ...+..+.++++. ++.+.. .+.|..+| .++.... ......+.++|+|+++.++. .+.++.|
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 1110 1 1235566666543 444432 13455555 3322111 11235678999999987644 4557899
Q ss_pred EEEECC--CC-ceE--EEEecc-ccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccCcc
Q 023772 209 RLLDRS--TG-ELL--QEYKGH-ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAHSL 271 (277)
Q Consensus 209 ~~wd~~--~~-~~~--~~~~~~-~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~ 271 (277)
.+||+. ++ +.. +.+... .........++.++|.+.++...++.|..||. +++.+..+..+..
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~ 271 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGK 271 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCS
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCC
Confidence 999985 55 321 122110 01122334567788877776666788999998 6777777776543
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.06 E-value=1.1e-08 Score=84.41 Aligned_cols=199 Identities=15% Similarity=0.078 Sum_probs=122.3
Q ss_pred EEEEeCCCCEEEEEe----------CCCcEEEEcCCCCeeEEEEecc-------CccEEEEEEcCCCCEEEEEeC--CCc
Q 023772 23 AARFNGDGNYCLSCG----------KDRTIRLWNPHRGIHIKTYKSH-------GREVRDVHVTADNSKLISCGG--DRQ 83 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~t~s~--d~~ 83 (277)
.+.|+|||++++.+. .+++|.+||+.+++.+.++..+ ......+.++|++++++.+.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999998876 3789999999999999998754 134678999999999998864 467
Q ss_pred EEE--EECCCCceeEEeec---------c---------cCceeEEEE--------------------------ecCCCEE
Q 023772 84 IFY--WDVSTGRVIRKFRG---------H---------ESEVNAVKF--------------------------NEYSSVV 117 (277)
Q Consensus 84 v~~--wd~~~~~~~~~~~~---------h---------~~~v~~i~~--------------------------~~~~~~l 117 (277)
+.+ +|+.+ +.++.- + .+.+..+.. .+++..+
T Consensus 149 v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~ 225 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML 225 (368)
T ss_dssp EEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred EEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEE
Confidence 888 98866 222210 0 000000100 1122222
Q ss_pred EEEeCCCcEEEEeCccCCCcceEeec------------cccCcEEEEEecCCeEEEeec---------CCcEEEEEccCC
Q 023772 118 VSAGYDQSLRAWDCRSHSTEPIQIID------------SFQDSVMSVCLTKTEIIGGSV---------DGTVRTFDIRVG 176 (277)
Q Consensus 118 ~s~~~d~~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~g~~---------d~~i~i~d~~~~ 176 (277)
+..+. +.+.+.|...........+. ........+..++..++.+.. +..+.++|+.+.
T Consensus 226 ~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~ 304 (368)
T 1mda_H 226 VWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG 304 (368)
T ss_dssp EECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred EEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC
Confidence 22223 45555554321110000000 000011334545556655432 234569999888
Q ss_pred cccccC-CCCCeeEEEEeCCCCE-EEEEe-cCCeEEEEECCCCceEEEEecc
Q 023772 177 RELSDD-LGQPVNCISMSNDGNC-ILASC-LDSTLRLLDRSTGELLQEYKGH 225 (277)
Q Consensus 177 ~~~~~~-~~~~v~~~~~s~~~~~-l~~~~-~d~~i~~wd~~~~~~~~~~~~~ 225 (277)
+.+... .+.....++|+|+|++ +++.. .++.|.++|+.+++.++.+...
T Consensus 305 ~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 305 QTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp CEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred eEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC
Confidence 765442 3446889999999984 56666 5999999999999999887643
No 233
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.05 E-value=2.5e-08 Score=89.63 Aligned_cols=195 Identities=12% Similarity=0.114 Sum_probs=124.1
Q ss_pred EEEEEeCCCCEEEEEeCCCc-------------EEEEcCCCCee--EEEEe--c-cCccEEEEEEcCCCCEEEEEe----
Q 023772 22 LAARFNGDGNYCLSCGKDRT-------------IRLWNPHRGIH--IKTYK--S-HGREVRDVHVTADNSKLISCG---- 79 (277)
Q Consensus 22 ~~~~~~~~~~~l~s~s~d~~-------------v~iwd~~~~~~--~~~~~--~-h~~~v~~~~~~~~~~~l~t~s---- 79 (277)
..++|+ ||+.|+.++.|.. |++|++.++.. ...+. . |.....++.++|++++|+..+
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 467899 9999998888754 99999876532 33333 2 444578899999999875433
Q ss_pred CCCcEEEEECCCCc-eeEEeecccCceeEEEEecCCCE-EEEEeCC---CcEEEEeCccCCCcceEeeccccCcEEEEEe
Q 023772 80 GDRQIFYWDVSTGR-VIRKFRGHESEVNAVKFNEYSSV-VVSAGYD---QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL 154 (277)
Q Consensus 80 ~d~~v~~wd~~~~~-~~~~~~~h~~~v~~i~~~~~~~~-l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
.+..+.++|++++. ....+..+....... +.+++.. ++....| +.|..+|+..........+..+...+..+.+
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~ 335 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHS 335 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEE
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEE
Confidence 22589999998763 345566666555544 5555554 4444443 6788899876543222232223222337777
Q ss_pred cCCeEEEeec-CC--cEEEEEccCCcccc--cCCCCCeeEEEEeCCCCEEEEEecC----CeEEEEECCCCce
Q 023772 155 TKTEIIGGSV-DG--TVRTFDIRVGRELS--DDLGQPVNCISMSNDGNCILASCLD----STLRLLDRSTGEL 218 (277)
Q Consensus 155 ~~~~~~~g~~-d~--~i~i~d~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~~wd~~~~~~ 218 (277)
.++.++.... ++ .|++||+..+.... ......+..+.+++++..++....+ +.++.||+.+++.
T Consensus 336 ~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 336 GSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 7777665544 44 58888887543221 1222346667778888777665554 7899999987754
No 234
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.05 E-value=5.6e-08 Score=85.38 Aligned_cols=233 Identities=14% Similarity=0.091 Sum_probs=143.6
Q ss_pred EEEEeCCCcEEEEcCCCCeeEEEEeccCc----cEEEEEEcCCCCEEEEEe------CCCcEEEEECCCCceeEEeeccc
Q 023772 33 CLSCGKDRTIRLWNPHRGIHIKTYKSHGR----EVRDVHVTADNSKLISCG------GDRQIFYWDVSTGRVIRKFRGHE 102 (277)
Q Consensus 33 l~s~s~d~~v~iwd~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~t~s------~d~~v~~wd~~~~~~~~~~~~h~ 102 (277)
++.++.|+.|..+|..+|+.+-....... .+.+.-...+ ..++.++ .++.|..+|.++|+.+.++....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVK-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEEC-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 77888899999999999988766553221 2221111123 3555554 48999999999999987765322
Q ss_pred Cc-------------------------------------e-eEEEEecCCCEEEEEeCCC----------------cEEE
Q 023772 103 SE-------------------------------------V-NAVKFNEYSSVVVSAGYDQ----------------SLRA 128 (277)
Q Consensus 103 ~~-------------------------------------v-~~i~~~~~~~~l~s~~~d~----------------~i~i 128 (277)
.. + ..+.+.+...+++.+..++ .|..
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 11 1 1345666777777776653 7888
Q ss_pred EeCccCCCcceEeeccc--------cCcEE-EEE-ecC---CeEEEeecCCcEEEEEccCCcccccC-------------
Q 023772 129 WDCRSHSTEPIQIIDSF--------QDSVM-SVC-LTK---TEIIGGSVDGTVRTFDIRVGRELSDD------------- 182 (277)
Q Consensus 129 wd~~~~~~~~~~~~~~~--------~~~~~-~~~-~~~---~~~~~g~~d~~i~i~d~~~~~~~~~~------------- 182 (277)
+|..+...........+ ..++. ... .++ ..++.++.+|.+.++|.++++.+...
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~ 362 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVD 362 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEEC
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccc
Confidence 88876543322222211 11222 111 223 23666788999999998887653211
Q ss_pred --CCC--------------------------CeeEEEEeCCCCEEEEEe-------------------------------
Q 023772 183 --LGQ--------------------------PVNCISMSNDGNCILASC------------------------------- 203 (277)
Q Consensus 183 --~~~--------------------------~v~~~~~s~~~~~l~~~~------------------------------- 203 (277)
.+. ....++++|+...+++..
T Consensus 363 ~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p 442 (599)
T 1w6s_A 363 LKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGP 442 (599)
T ss_dssp TTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECT
T ss_pred cCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCC
Confidence 001 123467777766554431
Q ss_pred --------cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 204 --------LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 204 --------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
.+|.|..||+.+++.+..+.... .. ....+...+.+++.|+.|+.++.||.++|+++-+++-.
T Consensus 443 ~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~--~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 443 KGDRQNYEGLGQIKAYNAITGDYKWEKMERF-AV--WGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp TSBTTTTBCCEEEEEECTTTCCEEEEEEESS-CC--CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cCCcccCCCcCeEEEEECCCCCEEeEecCCC-Cc--cCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 34789999999999887764221 11 11112234667777999999999999999999888744
No 235
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.04 E-value=1e-07 Score=83.57 Aligned_cols=236 Identities=12% Similarity=0.078 Sum_probs=145.3
Q ss_pred CCEEEEEeCCCcEEEEcCCCCeeEEEEeccCc----cEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCceeEEee
Q 023772 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR----EVRDVHVTADNSKLISCGG------DRQIFYWDVSTGRVIRKFR 99 (277)
Q Consensus 30 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~t~s~------d~~v~~wd~~~~~~~~~~~ 99 (277)
+..++.++.|+.|..+|..+|+.+-.+..... .+.+.-...+ ..++.++. ++.|..+|.++|+.+.++.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEEC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 45677788899999999999988776653221 2221111113 45555544 7999999999999887765
Q ss_pred cccCc-------------------------------------e-eEEEEecCCCEEEEEeCC----------------Cc
Q 023772 100 GHESE-------------------------------------V-NAVKFNEYSSVVVSAGYD----------------QS 125 (277)
Q Consensus 100 ~h~~~-------------------------------------v-~~i~~~~~~~~l~s~~~d----------------~~ 125 (277)
..... + ..+++.+....++.+..+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32110 0 124566666666665532 25
Q ss_pred EEEEeCccCCCcceEeecc--------ccCcEE-EEEecCC---eEEEeecCCcEEEEEccCCcccccC-C---------
Q 023772 126 LRAWDCRSHSTEPIQIIDS--------FQDSVM-SVCLTKT---EIIGGSVDGTVRTFDIRVGRELSDD-L--------- 183 (277)
Q Consensus 126 i~iwd~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~---~~~~g~~d~~i~i~d~~~~~~~~~~-~--------- 183 (277)
|..+|..+........... ...++. ....++. .++.+..+|.+.++|..+++.+... .
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~ 353 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK 353 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccccc
Confidence 8888887654322222111 112222 1112332 3567888899999998877643210 0
Q ss_pred -----CCC--------------------------eeEEEEeCCCCEEEEEe-----------------------------
Q 023772 184 -----GQP--------------------------VNCISMSNDGNCILASC----------------------------- 203 (277)
Q Consensus 184 -----~~~--------------------------v~~~~~s~~~~~l~~~~----------------------------- 203 (277)
+.+ ...++++|+...++...
T Consensus 354 ~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 433 (571)
T 2ad6_A 354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP 433 (571)
T ss_dssp ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred ccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceecc
Confidence 011 13467888877776653
Q ss_pred --------cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 204 --------LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 204 --------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
.++.|..||..+++.+..+.... .. ....+...+..++.++.|+.|+.||.++|+++-+++..
T Consensus 434 ~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~--~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 434 GPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AA--WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CC--CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CccccCCCCCCeEEEEECCCCCEEEEecCCC-Cc--cceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 34789999999999887775331 11 11112223566777899999999999999999888743
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.03 E-value=5.3e-08 Score=87.31 Aligned_cols=188 Identities=13% Similarity=0.062 Sum_probs=122.0
Q ss_pred CCCcEEEEcCCCCeeEEEEeccC-------------------------------ccEEEEEEcCCCCEEEEEeCCCc---
Q 023772 38 KDRTIRLWNPHRGIHIKTYKSHG-------------------------------REVRDVHVTADNSKLISCGGDRQ--- 83 (277)
Q Consensus 38 ~d~~v~iwd~~~~~~~~~~~~h~-------------------------------~~v~~~~~~~~~~~l~t~s~d~~--- 83 (277)
.|+.|+.||..+|+.+-.+.... .....+.++++.++++.+..++.
T Consensus 181 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 181 VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWD 260 (689)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccc
Confidence 37899999999999887765210 01125788888899998887764
Q ss_pred ----------------EEEEECCCCceeEEeec--cc-------CceeEEEEecCCC---EEEEEeCCCcEEEEeCccCC
Q 023772 84 ----------------IFYWDVSTGRVIRKFRG--HE-------SEVNAVKFNEYSS---VVVSAGYDQSLRAWDCRSHS 135 (277)
Q Consensus 84 ----------------v~~wd~~~~~~~~~~~~--h~-------~~v~~i~~~~~~~---~l~s~~~d~~i~iwd~~~~~ 135 (277)
|..||.++|+.+..++. |. .+........+++ .++.++.+|.++++|..+++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 99999999999988764 21 2222223333554 78889999999999987654
Q ss_pred CcceEeecc--------------------------cc-------------CcEEEEEecCCeEEEee-------------
Q 023772 136 TEPIQIIDS--------------------------FQ-------------DSVMSVCLTKTEIIGGS------------- 163 (277)
Q Consensus 136 ~~~~~~~~~--------------------------~~-------------~~~~~~~~~~~~~~~g~------------- 163 (277)
......+.. .. -.-.++......+++..
T Consensus 341 ~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 420 (689)
T 1yiq_A 341 LLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA 420 (689)
T ss_dssp EEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSC
T ss_pred EeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccc
Confidence 320000000 00 00012222222233221
Q ss_pred --------------------------------cCCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEE
Q 023772 164 --------------------------------VDGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDSTLRL 210 (277)
Q Consensus 164 --------------------------------~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~ 210 (277)
.+|.|..||+.+++..-. ....++..-.+...+..++.++.|+.++.
T Consensus 421 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a 500 (689)
T 1yiq_A 421 PKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIA 500 (689)
T ss_dssp CCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEE
T ss_pred ccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEE
Confidence 147799999998875432 23334444466677888999999999999
Q ss_pred EECCCCceEEEEecc
Q 023772 211 LDRSTGELLQEYKGH 225 (277)
Q Consensus 211 wd~~~~~~~~~~~~~ 225 (277)
||.++|+++..+...
T Consensus 501 ~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 501 YAADTGEKLWEQPAA 515 (689)
T ss_dssp EETTTCCEEEEEECS
T ss_pred EECCCCccceeeeCC
Confidence 999999999888643
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.02 E-value=7.2e-08 Score=78.16 Aligned_cols=216 Identities=12% Similarity=0.119 Sum_probs=138.0
Q ss_pred CCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEE
Q 023772 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVK 109 (277)
Q Consensus 30 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~ 109 (277)
+..+..++.++.+..+|.. ++....+..+...+.++...+++. +..++.++.+..+|.+ ++.+..+......+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 4566777888999999988 777766666655667777776665 5557778999999998 887777765566677777
Q ss_pred EecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC-eEEEeecCCcEEEEEccCCccccc-C-CCCC
Q 023772 110 FNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT-EIIGGSVDGTVRTFDIRVGRELSD-D-LGQP 186 (277)
Q Consensus 110 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~d~~i~i~d~~~~~~~~~-~-~~~~ 186 (277)
..+++.+.+.. +.+..+| .+.. ...........+..+..+++ .++.++.++.+..+|. .++.+.. . ....
T Consensus 184 ~d~~g~l~v~t---~~l~~~d-~~g~--~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~ 256 (330)
T 3hxj_A 184 IGKDGTIYFGS---DKVYAIN-PDGT--EKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRI 256 (330)
T ss_dssp ECTTCCEEEES---SSEEEEC-TTSC--EEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCC
T ss_pred EcCCCEEEEEe---CEEEEEC-CCCc--EEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCc
Confidence 77777766543 7789998 4332 12222222233444444544 5778888888888874 3332211 1 1222
Q ss_pred eeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCc
Q 023772 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 187 v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~ 260 (277)
+..+.+.+++. |..++.++.|..+|. +++.+..+.... .........+++. +..|+.+|.+++...+..
T Consensus 257 ~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~--~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 257 ESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGS--WIIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp CSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSS--CCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred cccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCC--ccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 34455666665 667788889999996 677766665321 1222333435554 566888999998876643
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.00 E-value=4.6e-08 Score=87.53 Aligned_cols=191 Identities=15% Similarity=0.128 Sum_probs=119.3
Q ss_pred CCEEEEEeCCCcEEEEcCCCCeeEEEEeccCcc-----------EEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 023772 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGRE-----------VRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF 98 (277)
Q Consensus 30 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~-----------v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~ 98 (277)
+..++.++.++.|.-+|..+|+.+-.+...... ...+.+ .+.+|+.++.|+.+..+|.++|+.+.++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 456777788899999999999988777643211 122333 4678888999999999999999999888
Q ss_pred ecc-c----CceeEEEEecCCCEEEEEeC------CCcEEEEeCccCCCcceEeecccc---------------------
Q 023772 99 RGH-E----SEVNAVKFNEYSSVVVSAGY------DQSLRAWDCRSHSTEPIQIIDSFQ--------------------- 146 (277)
Q Consensus 99 ~~h-~----~~v~~i~~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~--------------------- 146 (277)
..+ . ..+.+--...+ ..++.++. ++.|..+|..++............
T Consensus 155 ~~~~~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g 233 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred cCCcCcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence 754 1 12221111123 34444443 789999998775432111110000
Q ss_pred ---------C--cEEEEEecCCeEEEeecCC-------------------cEEEEEccCCcccccC----C-------CC
Q 023772 147 ---------D--SVMSVCLTKTEIIGGSVDG-------------------TVRTFDIRVGRELSDD----L-------GQ 185 (277)
Q Consensus 147 ---------~--~~~~~~~~~~~~~~g~~d~-------------------~i~i~d~~~~~~~~~~----~-------~~ 185 (277)
. ....+......++.++.++ .|..+|..+++..-.. + ..
T Consensus 234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 313 (677)
T 1kb0_A 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ 313 (677)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCC
Confidence 0 1123333445566665543 4888898888754220 1 11
Q ss_pred CeeEEEEeCCC---CEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 186 PVNCISMSNDG---NCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 186 ~v~~~~~s~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
....+....+| ..++.++.+|.++++|..+|+++..+.
T Consensus 314 ~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 314 PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 22223444467 678999999999999999999987654
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.00 E-value=2.4e-06 Score=67.28 Aligned_cols=231 Identities=7% Similarity=-0.017 Sum_probs=135.9
Q ss_pred CEEEEEeCCCcEEEEcCCCCee-----EEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCceeEEeecccCc
Q 023772 31 NYCLSCGKDRTIRLWNPHRGIH-----IKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVSTGRVIRKFRGHESE 104 (277)
Q Consensus 31 ~~l~s~s~d~~v~iwd~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~~~~~~~~~h~~~ 104 (277)
.+|+.+.. +.|+.+++..... ...+......+..++++++++.|+ +-..++.|..++++.+.....+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 34444443 4677777654321 112222234678999999766665 4456789999999766543333222346
Q ss_pred eeEEEEecCCC-EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeec---CCcEEEEEccCCc-
Q 023772 105 VNAVKFNEYSS-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSV---DGTVRTFDIRVGR- 177 (277)
Q Consensus 105 v~~i~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~---d~~i~i~d~~~~~- 177 (277)
...+++.+++. +.++....+.|.++++..... .............+.+++ ..++.+.. .+.|..+++....
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~--~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR--RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 68899998654 555555678899998764321 112221112345555554 34444433 3678788775322
Q ss_pred -ccccCCCCCeeEEEEeCCCCEE-EEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEE
Q 023772 178 -ELSDDLGQPVNCISMSNDGNCI-LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFW 255 (277)
Q Consensus 178 -~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iw 255 (277)
.+........+.+++++++..| ++-...+.|..+|.........+.+. ......++. ++.+.++....+.|..+
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~---~~P~gi~~d-~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL---QYPFAVTSY-GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC---CSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC---CCceEEEEe-CCEEEEEECCCCeEEEE
Confidence 1111122457889999987655 55556789999999755443333321 112223333 34445555567899999
Q ss_pred ECcCccceeeecc
Q 023772 256 DLVDASVVAKFKA 268 (277)
Q Consensus 256 d~~~~~~~~~~~~ 268 (277)
|..+++.+.++..
T Consensus 235 d~~~g~~~~~i~~ 247 (267)
T 1npe_A 235 DLAISKEMDTFHP 247 (267)
T ss_dssp ETTTTEEEEEECC
T ss_pred eCCCCCceEEEcc
Confidence 9999998888863
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.99 E-value=9e-07 Score=71.79 Aligned_cols=246 Identities=10% Similarity=0.034 Sum_probs=143.2
Q ss_pred ccccccceeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEec--------------------cCccEEE
Q 023772 6 LPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKS--------------------HGREVRD 65 (277)
Q Consensus 6 ~~~~~~~~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--------------------h~~~v~~ 65 (277)
+|..+.-.+.+--....+++++++|++++++..++.|..||..++... .+.. ....+..
T Consensus 6 ~~~~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~g 84 (322)
T 2fp8_A 6 SPILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYD 84 (322)
T ss_dssp ----CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEE
T ss_pred CCccceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCce
Confidence 343333334443344567889999997888888999999998765432 3321 0124788
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeec-----ccCceeEEEEec-CCCEEEEEeC-----------------
Q 023772 66 VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRG-----HESEVNAVKFNE-YSSVVVSAGY----------------- 122 (277)
Q Consensus 66 ~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~-----h~~~v~~i~~~~-~~~~l~s~~~----------------- 122 (277)
+++.+++..|+.+...+.+..+|..+++. ..+.. .....+.+.+.+ ++++.++...
T Consensus 85 i~~~~~~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 85 ISYNLQNNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp EEEETTTTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred EEEcCCCCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCC
Confidence 99997334555554555588888776542 22221 123467899999 8888776533
Q ss_pred CCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEe-ecCCcEEEEEccCCc----ccccCCCCCeeEEEEeCC
Q 023772 123 DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGG-SVDGTVRTFDIRVGR----ELSDDLGQPVNCISMSND 195 (277)
Q Consensus 123 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g-~~d~~i~i~d~~~~~----~~~~~~~~~v~~~~~s~~ 195 (277)
++.|..||......... ... ......+.+++ ..++.+ ...+.|..|++.... ........ ...++++++
T Consensus 164 ~g~v~~~d~~~~~~~~~--~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLL--LKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD 239 (322)
T ss_dssp CEEEEEEETTTTEEEEE--EEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTT
T ss_pred CceEEEEeCCCCEEEEe--ccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCC
Confidence 36688888654322111 111 11122344443 445444 556889999986421 11111223 778999999
Q ss_pred CCEEEEEec----------CCeEEEEECCCCceEEEEecccc--ceeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 196 GNCILASCL----------DSTLRLLDRSTGELLQEYKGHIC--KSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 196 ~~~l~~~~~----------d~~i~~wd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
|+++++... .+.|..+|.. ++.+..+..... ......+++ .++.+.++....+.|..+++..
T Consensus 240 G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 240 GHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 987776654 4678888874 777777654321 112233333 3566666666778888888753
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.97 E-value=5.5e-07 Score=70.64 Aligned_cols=192 Identities=12% Similarity=0.026 Sum_probs=125.0
Q ss_pred EEEEEEeCCCCEEEEEeC--CCcEEEEcCCCCeeEEEEeccCc-cEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCceeE
Q 023772 21 VLAARFNGDGNYCLSCGK--DRTIRLWNPHRGIHIKTYKSHGR-EVRDVHVTADNSKLI-SCGGDRQIFYWDVSTGRVIR 96 (277)
Q Consensus 21 V~~~~~~~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~~~~~ 96 (277)
...+.|++++.+.++.+. ++.|++.|+.+++.+..+..... ....+++. ++.|+ +.-.++.+.++|.++.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578999998765555553 68999999999998888753222 22345554 44554 44568899999999999998
Q ss_pred EeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccC---cEEEEEecCCeEEEee-cCCcEEEEE
Q 023772 97 KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD---SVMSVCLTKTEIIGGS-VDGTVRTFD 172 (277)
Q Consensus 97 ~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~-~d~~i~i~d 172 (277)
++... .+ ....+.++++.++.+..++.+.++|..+.............. ....+.+....+++.. .++.|.+.|
T Consensus 101 ~i~~g-~~-~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID 178 (266)
T 2iwa_A 101 NFTHQ-MK-DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARIS 178 (266)
T ss_dssp EEECC-SS-SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEE
T ss_pred EEECC-CC-CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEE
Confidence 88643 11 124455677777777788999999987654322222211111 1233333344555444 468899999
Q ss_pred ccCCcccccC---------------CCCCeeEEEEeCCCCEE-EEEecCCeEEEEECCCC
Q 023772 173 IRVGRELSDD---------------LGQPVNCISMSNDGNCI-LASCLDSTLRLLDRSTG 216 (277)
Q Consensus 173 ~~~~~~~~~~---------------~~~~v~~~~~s~~~~~l-~~~~~d~~i~~wd~~~~ 216 (277)
..+++.+... .....+.++|+|+++.+ +++...+.+...++...
T Consensus 179 ~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 179 AKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9887643211 11356899999998755 55557788888887543
No 242
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.96 E-value=3.2e-07 Score=80.55 Aligned_cols=238 Identities=17% Similarity=0.152 Sum_probs=144.8
Q ss_pred CCEEEEEeCCCcEEEEcCCCCeeEEEEeccCc----cEEE-EEEcC---CCC-EEEEEe------CCCcEEEEECCCCce
Q 023772 30 GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGR----EVRD-VHVTA---DNS-KLISCG------GDRQIFYWDVSTGRV 94 (277)
Q Consensus 30 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~----~v~~-~~~~~---~~~-~l~t~s------~d~~v~~wd~~~~~~ 94 (277)
+..++.++.|+.|.-+|..+|+.+-.+..... .+.+ -.+.. +++ .++.++ .++.|..+|.++|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45677788899999999999998876654321 1111 11111 122 566654 378999999999998
Q ss_pred eEEeecccCc----------------------------------------e-eEEEEecCCCEEEEEeC-----------
Q 023772 95 IRKFRGHESE----------------------------------------V-NAVKFNEYSSVVVSAGY----------- 122 (277)
Q Consensus 95 ~~~~~~h~~~----------------------------------------v-~~i~~~~~~~~l~s~~~----------- 122 (277)
+.+....... + ..+++.+...+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 8765421100 0 12455666667766553
Q ss_pred ---------C----CcEEEEeCccCCCcceEeeccc--------cCcEEEEE--ecCC---eEEEeecCCcEEEEEccCC
Q 023772 123 ---------D----QSLRAWDCRSHSTEPIQIIDSF--------QDSVMSVC--LTKT---EIIGGSVDGTVRTFDIRVG 176 (277)
Q Consensus 123 ---------d----~~i~iwd~~~~~~~~~~~~~~~--------~~~~~~~~--~~~~---~~~~g~~d~~i~i~d~~~~ 176 (277)
| +.|..+|..+...........+ ..++..-. .+++ .++.++.+|.+.++|..++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 5788888877654332222111 12222211 2332 4677889999999998877
Q ss_pred cccccC-CC--------------C--------------------------------CeeEEEEeCCCCEEEEEe------
Q 023772 177 RELSDD-LG--------------Q--------------------------------PVNCISMSNDGNCILASC------ 203 (277)
Q Consensus 177 ~~~~~~-~~--------------~--------------------------------~v~~~~~s~~~~~l~~~~------ 203 (277)
+.+... .. . ....++++|+...+++..
T Consensus 357 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~ 436 (582)
T 1flg_A 357 KLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKED 436 (582)
T ss_dssp CEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEE
T ss_pred CEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhccee
Confidence 643210 00 0 012456777655444432
Q ss_pred ---------------------------cCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEE
Q 023772 204 ---------------------------LDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256 (277)
Q Consensus 204 ---------------------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd 256 (277)
.+|.|+.||+.+++.+..+.... ... ...+...+.+++.|+.|+.++.||
T Consensus 437 ~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~--~g~~~tagglvf~g~~dg~l~A~D 513 (582)
T 1flg_A 437 YWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLW--AGVLATAGNLVFTGTGDGYFKAFD 513 (582)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCC--SCCEEETTTEEEEECTTSEEEEEE
T ss_pred eecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCc--ccceEeCCCEEEEECCCCcEEEEE
Confidence 26789999999999887765431 111 111222466777899999999999
Q ss_pred CcCccceeeeccCc
Q 023772 257 LVDASVVAKFKAHS 270 (277)
Q Consensus 257 ~~~~~~~~~~~~h~ 270 (277)
.++|+++-+++...
T Consensus 514 ~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 514 AKSGKELWKFQTGS 527 (582)
T ss_dssp TTTCCEEEEEECSS
T ss_pred CCCCCEEEEecCCC
Confidence 99999998887543
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.93 E-value=3.9e-08 Score=79.76 Aligned_cols=229 Identities=17% Similarity=0.184 Sum_probs=135.5
Q ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEee
Q 023772 20 AVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFR 99 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~ 99 (277)
.+.++...++|.+ ..++.+ |..+|. +++.+..+...........+. +..+..++.++.+..+|.+ ++....+.
T Consensus 61 ~~~~~~~~~~g~l-~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~ 133 (330)
T 3hxj_A 61 IECRPSIGKDGTI-YFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFK 133 (330)
T ss_dssp EEECCEETTTTEE-CCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEE
T ss_pred cccceEEecCCcE-EEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEc
Confidence 3455666666654 444444 888885 554433332222222233333 5677778889999999998 77776666
Q ss_pred cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEec-CCeEEEeecCCcEEEEEccCCcc
Q 023772 100 GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT-KTEIIGGSVDGTVRTFDIRVGRE 178 (277)
Q Consensus 100 ~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~d~~i~i~d~~~~~~ 178 (277)
.....+.++...+++.+ ..++.++.+..+|.. ... ..........+..+..+ ...++.++ +.+..+| .+++.
T Consensus 134 ~~~~~~~~~~~~~~g~l-~vgt~~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~ 206 (330)
T 3hxj_A 134 TKKAIYATPIVSEDGTI-YVGSNDNYLYAINPD-GTE--KWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTE 206 (330)
T ss_dssp CSSCCCSCCEECTTSCE-EEECTTSEEEEECTT-SCE--EEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCE
T ss_pred CCCceeeeeEEcCCCEE-EEEcCCCEEEEECCC-CCE--eEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcE
Confidence 55555666777666664 456778999999976 322 11122112223333343 33456666 7888899 55543
Q ss_pred ccc--CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEE
Q 023772 179 LSD--DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256 (277)
Q Consensus 179 ~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd 256 (277)
... .....+.++..+++|. |..++.++.+..+|. +++.+..+..... ........+++ .+..|+.+|.|..+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~--~~~~~~~~~~g-~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 207 KWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKR--IESSPVIGNTD-TIYFGSYDGHLYAIN 281 (330)
T ss_dssp EEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSC--CCSCCEECTTS-CEEEECTTCEEEEEC
T ss_pred EEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCC--ccccceEcCCC-eEEEecCCCCEEEEC
Confidence 322 1234577888888876 566677888998985 5666666553321 11222333344 566678888999999
Q ss_pred CcCccceeeecc
Q 023772 257 LVDASVVAKFKA 268 (277)
Q Consensus 257 ~~~~~~~~~~~~ 268 (277)
. +++.+..+..
T Consensus 282 ~-~g~~~~~~~~ 292 (330)
T 3hxj_A 282 P-DGTEKWNFET 292 (330)
T ss_dssp T-TSCEEEEEEC
T ss_pred C-CCcEEEEEEc
Confidence 6 6777666553
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.93 E-value=2.4e-07 Score=71.99 Aligned_cols=179 Identities=12% Similarity=0.133 Sum_probs=115.5
Q ss_pred EEEEEEeCCCCEEEEEeCCC--cEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCceeEE
Q 023772 21 VLAARFNGDGNYCLSCGKDR--TIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISC-GGDRQIFYWDVSTGRVIRK 97 (277)
Q Consensus 21 V~~~~~~~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~-s~d~~v~~wd~~~~~~~~~ 97 (277)
...+.|+ ++.+..+.|.+| .|+++|+.+++.+..+.... ......+.+.++.|... -.++.+.++|.++.+.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 4778898 677777888876 99999999999988876533 33333333345555544 4588999999999999998
Q ss_pred eecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeecc--cc-CcEEEEEecCCeEEEee-cCCcEEEEEc
Q 023772 98 FRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDS--FQ-DSVMSVCLTKTEIIGGS-VDGTVRTFDI 173 (277)
Q Consensus 98 ~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~-~d~~i~i~d~ 173 (277)
+.... ....+.++++.++.+..++.|.++|..+........... .+ .....+.+....+.+.. .+..|.+.|.
T Consensus 123 i~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 123 FNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp EECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECT
T ss_pred EECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEEC
Confidence 87533 223344566666666667889999987654322222211 11 12222333344555554 4678888998
Q ss_pred cCCccccc--------------CCCCCeeEEEEeCCCCEEEEEec
Q 023772 174 RVGRELSD--------------DLGQPVNCISMSNDGNCILASCL 204 (277)
Q Consensus 174 ~~~~~~~~--------------~~~~~v~~~~~s~~~~~l~~~~~ 204 (277)
.+++.+.. ......+.++++|+++.|+..+.
T Consensus 200 ~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 200 ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 88764311 11235689999998877776654
No 245
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.86 E-value=4.1e-06 Score=65.69 Aligned_cols=206 Identities=10% Similarity=0.033 Sum_probs=132.9
Q ss_pred eeEEEEeccCc--cEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCceeEEeecccC-ceeEEEEecCCCEEEEEeCCCc
Q 023772 51 IHIKTYKSHGR--EVRDVHVTADNSKLISCGG--DRQIFYWDVSTGRVIRKFRGHES-EVNAVKFNEYSSVVVSAGYDQS 125 (277)
Q Consensus 51 ~~~~~~~~h~~--~v~~~~~~~~~~~l~t~s~--d~~v~~wd~~~~~~~~~~~~h~~-~v~~i~~~~~~~~l~s~~~d~~ 125 (277)
+.+.++. |.. ....+.|++++..+++.+. +++|.+.|+++++.+.++.-... ....+++.. +++.++.-.++.
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSE
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCE
Confidence 3455664 443 3679999998655555543 57999999999999887653221 223455542 344455556899
Q ss_pred EEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecCCcEEEEEccCCcccccC----CC---CCeeEEEEeCCCCE
Q 023772 126 LRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDD----LG---QPVNCISMSNDGNC 198 (277)
Q Consensus 126 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~----~~---~~v~~~~~s~~~~~ 198 (277)
+.++|..+... +..+......-..+..++..++++..++.|.++|..+.+..... .+ ..++.+.|. +|..
T Consensus 88 v~viD~~t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 88 GFIYDRRTLSN--IKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEEETTTTEE--EEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCCCcE--EEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 99999876433 22222111122446667777766667889999999876543321 11 136788888 6754
Q ss_pred EEEEecCCeEEEEECCCCceEEEEecccc-----------ceeeeeeEecCCCc-eEEeecCCCeEEEEECcCcc
Q 023772 199 ILASCLDSTLRLLDRSTGELLQEYKGHIC-----------KSFKTDCCLTNSDA-HVTGGSEDGYIYFWDLVDAS 261 (277)
Q Consensus 199 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~l~sgs~d~~i~iwd~~~~~ 261 (277)
++....++.|.+.|..+++.+..+..... .....-.++.++++ +++++...+.++..++....
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 45544678999999999999988863210 01233456788764 56778888999999887653
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.85 E-value=1.1e-06 Score=68.30 Aligned_cols=176 Identities=11% Similarity=0.045 Sum_probs=113.4
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEE--EEEcCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 023772 21 VLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD--VHVTADNSKLISCGGDRQIFYWDVSTGRVIRKF 98 (277)
Q Consensus 21 V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~--~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~ 98 (277)
...+.|+. +.+..+.+.+|.|+++|+.+++.+..+ .. ..... +++.. ++..+..-.++.+.++|.++.+.+.++
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 46788874 567778899999999999999887777 32 23333 45542 234444556899999999999999988
Q ss_pred ecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccC---cEEEEEecCCeEEEee-cCCcEEEEEcc
Q 023772 99 RGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQD---SVMSVCLTKTEIIGGS-VDGTVRTFDIR 174 (277)
Q Consensus 99 ~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~-~d~~i~i~d~~ 174 (277)
..-.. =+.++ ++++.|+.+..++.|.++|..+.............. ....+.+....+.... .+..|.+.|..
T Consensus 133 ~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 133 RYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp ECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTT
T ss_pred eCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCC
Confidence 75322 23444 557777777778999999987654332222211111 2233344444555554 46788888988
Q ss_pred CCccccc---------------CCCCCeeEEEEeCCCCEEEEEe
Q 023772 175 VGRELSD---------------DLGQPVNCISMSNDGNCILASC 203 (277)
Q Consensus 175 ~~~~~~~---------------~~~~~v~~~~~s~~~~~l~~~~ 203 (277)
+++.+.. ....-.+.++++|+++.|+..+
T Consensus 210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 8764311 1123578999999766555544
No 247
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.83 E-value=1.5e-05 Score=72.64 Aligned_cols=238 Identities=11% Similarity=0.122 Sum_probs=146.3
Q ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEE-eccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEee
Q 023772 21 VLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTY-KSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFR 99 (277)
Q Consensus 21 V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~ 99 (277)
|.++...+++.+.+ +..++.|..||..+++..... ..+...|.++...+++...+ |..++-+..||..+++......
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeec
Confidence 78888888886655 555556889998776543321 12345788888887776555 4444458999988765433221
Q ss_pred c-------ccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEee-----ccccCcEEEEEecCCe-EEEeecCC
Q 023772 100 G-------HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQII-----DSFQDSVMSVCLTKTE-IIGGSVDG 166 (277)
Q Consensus 100 ~-------h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~g~~d~ 166 (277)
. ....|.++...+++.+.+.. .+ -+.+||............ ......+.++..+++. +..|+.++
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~ 330 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLWIGT-FN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFG 330 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEEEEE-SS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSS
T ss_pred CCCCccccCCCeEEEEEEcCCCCEEEEe-CC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCC
Confidence 1 13568899888888776644 44 488888754321111000 0122457777776544 88888888
Q ss_pred cEEEEEccCCcc--ccc------CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEecc------ccceeee
Q 023772 167 TVRTFDIRVGRE--LSD------DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH------ICKSFKT 232 (277)
Q Consensus 167 ~i~i~d~~~~~~--~~~------~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~------~~~~~~~ 232 (277)
-|..|+...... +.. .....|.++..+++|+ |-.|..++.|..||..+++........ .....+.
T Consensus 331 Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 409 (795)
T 4a2l_A 331 GLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK 409 (795)
T ss_dssp CEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE
T ss_pred CeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE
Confidence 899998764421 111 1234689999999887 556777878999999876543321111 0012233
Q ss_pred eeEecCCCceEEeecCCCeEEEEECcCccce
Q 023772 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 233 ~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~ 263 (277)
..+..+++..|-.|+.++-|..||..+++..
T Consensus 410 ~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~ 440 (795)
T 4a2l_A 410 AVYVDEKKSLVYIGTHAGGLSILHRNSGQVE 440 (795)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEETTTCCEE
T ss_pred EEEEcCCCCEEEEEeCcCceeEEeCCCCcEE
Confidence 3444566663555667677999998887643
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.79 E-value=3.1e-05 Score=62.20 Aligned_cols=223 Identities=9% Similarity=-0.001 Sum_probs=131.8
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCC--cEEEEECCCCceeE
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDR--QIFYWDVSTGRVIR 96 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~--~v~~wd~~~~~~~~ 96 (277)
.....++|+++|+++++-..++.|..||...+ ....+. -...+..+++.++++.+++..... .|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45778999999998777778899999997653 333333 245788999999998766654432 47777877776533
Q ss_pred Eee-cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEe---------eccccCcEEEEEecCCeE-EEeecC
Q 023772 97 KFR-GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQI---------IDSFQDSVMSVCLTKTEI-IGGSVD 165 (277)
Q Consensus 97 ~~~-~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~g~~d 165 (277)
... ........+...+.+..+++...++.|..+|....... +.. ..........+..++..+ ++-...
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~-v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS-IWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEK 188 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE-EEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe-EEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCC
Confidence 222 11223345555555555555556888888886532110 100 000011223345555554 445567
Q ss_pred CcEEEEEccC-Ccc----cccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEec---
Q 023772 166 GTVRTFDIRV-GRE----LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLT--- 237 (277)
Q Consensus 166 ~~i~i~d~~~-~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--- 237 (277)
+.|..||+.. ++. .... ......++++++|+++++....+.|.++|.. ++................+++.
T Consensus 189 ~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~ 266 (306)
T 2p4o_A 189 MLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTE 266 (306)
T ss_dssp TEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCST
T ss_pred CEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEeccc
Confidence 8899999864 221 0001 1245668999999987777778899999985 6553221111111234556776
Q ss_pred CCCceEEee
Q 023772 238 NSDAHVTGG 246 (277)
Q Consensus 238 ~~~~~l~sg 246 (277)
++++.|...
T Consensus 267 ~d~~~LyVt 275 (306)
T 2p4o_A 267 GDCTAIYVV 275 (306)
T ss_dssp TTTTEEEEE
T ss_pred CCCCEEEEE
Confidence 665555443
No 249
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.79 E-value=1.9e-05 Score=62.11 Aligned_cols=202 Identities=4% Similarity=-0.035 Sum_probs=122.7
Q ss_pred CcEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCceeE
Q 023772 19 GAVLAARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVSTGRVIR 96 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~~~~~ 96 (277)
.....++|++++..|+ +-..++.|.+++...+.....+.........+++.++++.|+ +-...+.|.+++++......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 3467899998665555 555678999999876544333333335678999999766555 44567899999987543222
Q ss_pred EeecccCceeEEEEecCCCEEEEEeC---CCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeE-EEeecCCcEEE
Q 023772 97 KFRGHESEVNAVKFNEYSSVVVSAGY---DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEI-IGGSVDGTVRT 170 (277)
Q Consensus 97 ~~~~h~~~v~~i~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~i 170 (277)
...........+++.|++..+..+.. .+.|..+++..... .............+.+++ ..+ ++-...+.|..
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~--~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR--RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC--EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc--EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 22222245678999996555544443 36788887753221 111111122344555554 344 44555678999
Q ss_pred EEccCCcccc-cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 171 FDIRVGRELS-DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 171 ~d~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
+|+....... .........+++. ++..+++....+.|..+|..+++.+..+.
T Consensus 194 ~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 194 LNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 9986432211 1112334567765 44444555566899999999998887775
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.78 E-value=3.1e-06 Score=65.14 Aligned_cols=183 Identities=13% Similarity=0.120 Sum_probs=115.8
Q ss_pred cCCc--EEEEEEeCCCCEEEEEeCCC--cEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCC
Q 023772 17 HEGA--VLAARFNGDGNYCLSCGKDR--TIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVST 91 (277)
Q Consensus 17 H~~~--V~~~~~~~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~ 91 (277)
|... +-.+.|++ +.+..|.+.+| .|+++|+.+++.+....... ......+...+++|. ..-.++.+.++|.++
T Consensus 17 hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 17 HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEECCc
Confidence 5443 56899987 56667777764 99999999999988876533 222222222344444 445689999999999
Q ss_pred CceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeecccc---CcEEEEEecCCeEEEee-cCCc
Q 023772 92 GRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQ---DSVMSVCLTKTEIIGGS-VDGT 167 (277)
Q Consensus 92 ~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~-~d~~ 167 (277)
.+.+.++...... +.++ +++..|+.+..+++|.++|..+............. .....+.+....+.... .+..
T Consensus 95 l~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~ 171 (243)
T 3mbr_X 95 LTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSR 171 (243)
T ss_dssp TEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTE
T ss_pred CcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCe
Confidence 9999988754322 3444 56666666667889999998765432222221111 12333444444555544 4678
Q ss_pred EEEEEccCCccccc---------------CCCCCeeEEEEeCCCCEEEEEec
Q 023772 168 VRTFDIRVGRELSD---------------DLGQPVNCISMSNDGNCILASCL 204 (277)
Q Consensus 168 i~i~d~~~~~~~~~---------------~~~~~v~~~~~s~~~~~l~~~~~ 204 (277)
|.+.|..+++.+.. ......+.++++|+++.|+..+.
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 88888887764311 11235689999998777666553
No 251
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.75 E-value=7.4e-07 Score=79.55 Aligned_cols=239 Identities=10% Similarity=0.064 Sum_probs=132.1
Q ss_pred EEEEeC-CCCEEEEEeCCC-----------cEEEEcCCCCeeEE--EEe-ccCccEEEEEEcCCCCEEEEEeC-CCcEEE
Q 023772 23 AARFNG-DGNYCLSCGKDR-----------TIRLWNPHRGIHIK--TYK-SHGREVRDVHVTADNSKLISCGG-DRQIFY 86 (277)
Q Consensus 23 ~~~~~~-~~~~l~s~s~d~-----------~v~iwd~~~~~~~~--~~~-~h~~~v~~~~~~~~~~~l~t~s~-d~~v~~ 86 (277)
.+++.+ ++++++.||.+. .+.+||+.+++... ... .+.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 888888887653 58899988875322 221 23334556778889999999884 568999
Q ss_pred EECCCCcee--EEeecccCceeEEEEecCCCEEEEEe-CC-----CcEEEEeCccCCCcceEee--cccc--CcEEEEEe
Q 023772 87 WDVSTGRVI--RKFRGHESEVNAVKFNEYSSVVVSAG-YD-----QSLRAWDCRSHSTEPIQII--DSFQ--DSVMSVCL 154 (277)
Q Consensus 87 wd~~~~~~~--~~~~~h~~~v~~i~~~~~~~~l~s~~-~d-----~~i~iwd~~~~~~~~~~~~--~~~~--~~~~~~~~ 154 (277)
||..+++-. ..+...+ .-.++...+++++++.|+ .+ ..+.+||+.+..-..+... .... .....+..
T Consensus 270 yd~~t~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 998876422 1121111 113455667889999988 44 5689999865321110000 0000 00000001
Q ss_pred cCCeEEEeecC---------CcEEEEEccCCccccc---C-C-------CCCeeEEEEeC-CCCEEEEEecCC-------
Q 023772 155 TKTEIIGGSVD---------GTVRTFDIRVGRELSD---D-L-------GQPVNCISMSN-DGNCILASCLDS------- 206 (277)
Q Consensus 155 ~~~~~~~g~~d---------~~i~i~d~~~~~~~~~---~-~-------~~~v~~~~~s~-~~~~l~~~~~d~------- 206 (277)
....++.|+.+ ..+..||.....-... . . ...-.++.|.. +++.++.|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 12223444333 4567788765432110 0 0 01123444443 677778877543
Q ss_pred ----eEEEEECCCCceEEEEe-ccccceeeeeeEecCCCceEEeecCC-----------CeEEEEECcCccc
Q 023772 207 ----TLRLLDRSTGELLQEYK-GHICKSFKTDCCLTNSDAHVTGGSED-----------GYIYFWDLVDASV 262 (277)
Q Consensus 207 ----~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~sgs~d-----------~~i~iwd~~~~~~ 262 (277)
.+.+||..+.+...... ..........++..+++++++.|+.+ ..+.+||..+.+.
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W 500 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF 500 (656)
T ss_dssp CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE
T ss_pred CcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCce
Confidence 67888888766543320 11111112233456788888887654 5689999987654
No 252
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.74 E-value=1.5e-06 Score=72.69 Aligned_cols=181 Identities=15% Similarity=0.142 Sum_probs=116.0
Q ss_pred EEEEEeCCCCEEEEEeCC------CcEEEEcCCCCeeEEEEeccCcc---EEEEEEcCCCCEEEEEe-------------
Q 023772 22 LAARFNGDGNYCLSCGKD------RTIRLWNPHRGIHIKTYKSHGRE---VRDVHVTADNSKLISCG------------- 79 (277)
Q Consensus 22 ~~~~~~~~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~~h~~~---v~~~~~~~~~~~l~t~s------------- 79 (277)
..+...|+| +++++..+ +.+.+.|..+++.+.++.....+ -..+.|+|+++.++++.
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~ 219 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKL 219 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCT
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccch
Confidence 346678999 77777665 78999999999999888643222 34588899999999885
Q ss_pred ------CCCcEEEEECCCCceeEEeeccc--CceeEEEE--ecCCCEEEEEe------CCCcEEEEeCccCCCcceEee-
Q 023772 80 ------GDRQIFYWDVSTGRVIRKFRGHE--SEVNAVKF--NEYSSVVVSAG------YDQSLRAWDCRSHSTEPIQII- 142 (277)
Q Consensus 80 ------~d~~v~~wd~~~~~~~~~~~~h~--~~v~~i~~--~~~~~~l~s~~------~d~~i~iwd~~~~~~~~~~~~- 142 (277)
.+.+|.+||+.+++.+.++.... .....+.| +|++++++.+. .+++|.+|..........+.+
T Consensus 220 ~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId 299 (462)
T 2ece_A 220 EHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE 299 (462)
T ss_dssp TTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred hhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe
Confidence 36899999999988887776421 22334555 89998877665 566887765432211111111
Q ss_pred -ccc----------------cCcEEE--EEecCCeEEE-eecCCcEEEEEccCCc---cccc-CCC-----------C--
Q 023772 143 -DSF----------------QDSVMS--VCLTKTEIIG-GSVDGTVRTFDIRVGR---ELSD-DLG-----------Q-- 185 (277)
Q Consensus 143 -~~~----------------~~~~~~--~~~~~~~~~~-g~~d~~i~i~d~~~~~---~~~~-~~~-----------~-- 185 (277)
... ...... ++.+++.|.+ .-..+.|.+||+.... .+.. ..+ .
T Consensus 300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~ 379 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKL 379 (462)
T ss_dssp ECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCC
T ss_pred CCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccC
Confidence 000 112233 3444455544 4456899999985321 1110 111 1
Q ss_pred --CeeEEEEeCCCCEEEEEe
Q 023772 186 --PVNCISMSNDGNCILASC 203 (277)
Q Consensus 186 --~v~~~~~s~~~~~l~~~~ 203 (277)
..+.+.++|+|++|+++.
T Consensus 380 ~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 380 TGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEcCCCCEEEEEc
Confidence 368899999999998887
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.67 E-value=1.7e-05 Score=61.55 Aligned_cols=188 Identities=11% Similarity=0.115 Sum_probs=117.8
Q ss_pred eEEEEeccCcc--EEEEEEcCCCCEEEEEeCCC--cEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEE-eCCCcE
Q 023772 52 HIKTYKSHGRE--VRDVHVTADNSKLISCGGDR--QIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSA-GYDQSL 126 (277)
Q Consensus 52 ~~~~~~~h~~~--v~~~~~~~~~~~l~t~s~d~--~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~-~~d~~i 126 (277)
.+.++ .|... ...+.|+ ++..+.+.+.+| .|+.+|+++++.+.+..-.. ......+.+++..+... -.++.+
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEE
Confidence 44555 34443 4788888 666667777766 89999999999988876433 33333333334444444 458899
Q ss_pred EEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecCCcEEEEEccCCccccc----CCC---CCeeEEEEeCCCCEE
Q 023772 127 RAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSD----DLG---QPVNCISMSNDGNCI 199 (277)
Q Consensus 127 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~----~~~---~~v~~~~~s~~~~~l 199 (277)
.+||..+... +..+.... .-..++.++..++....++.|.++|..+.+.... ..+ ..++.+.+. +|..+
T Consensus 110 ~v~D~~t~~~--~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 110 FVWNIRNLRQ--VRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF 185 (262)
T ss_dssp EEEETTTCCE--EEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECccCcE--EEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence 9999876543 22222211 2234556666677666678899999987764432 112 235667876 67644
Q ss_pred EEEecCCeEEEEECCCCceEEEEecccc----------ceeeeeeEecCCCce-EEee
Q 023772 200 LASCLDSTLRLLDRSTGELLQEYKGHIC----------KSFKTDCCLTNSDAH-VTGG 246 (277)
Q Consensus 200 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-l~sg 246 (277)
+..-.++.|.+.|.++++.+..+..... .....-.++.|+++. +++|
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 4444688999999999999988765311 112233567776554 4454
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.65 E-value=0.00017 Score=65.70 Aligned_cols=235 Identities=11% Similarity=0.064 Sum_probs=143.7
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEec--------cCccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKS--------HGREVRDVHVTADNSKLISCGGDRQIFYWDV 89 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--------h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~ 89 (277)
...|.++...++|.+. .|..++-|..||..++........ ....|.++...+++..|..|..++-+..+|.
T Consensus 356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 3569999988888755 467777899999887654332211 2357899999888874556777777999998
Q ss_pred CCCceeEEee-----cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEee----ccccCcEEEEEecCCe-E
Q 023772 90 STGRVIRKFR-----GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQII----DSFQDSVMSVCLTKTE-I 159 (277)
Q Consensus 90 ~~~~~~~~~~-----~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~ 159 (277)
.+++... +. .....|.++...+++++.+.. .+| +..||..+......... ......+.++..+++. +
T Consensus 435 ~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 511 (795)
T 4a2l_A 435 NSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL 511 (795)
T ss_dssp TTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE
T ss_pred CCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE
Confidence 8776433 32 134578888888888776654 344 88888764322111100 0112456666666543 6
Q ss_pred EEeecCCcEEEEEccCCcc-cc---c---CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEecccc--cee
Q 023772 160 IGGSVDGTVRTFDIRVGRE-LS---D---DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHIC--KSF 230 (277)
Q Consensus 160 ~~g~~d~~i~i~d~~~~~~-~~---~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~--~~~ 230 (277)
..|+. +-|..||..+.+. +. . .....|.++..+++|...++ +.. .|..||..+++. ..+..... ...
T Consensus 512 Wigt~-~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~d~~~~~~-~~~~~~~gl~~~~ 587 (795)
T 4a2l_A 512 WIGGE-EGLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNGIIWVG-TRE-GFYCFNEKDKQI-KRYNTTNGLPNNV 587 (795)
T ss_dssp EEEES-SCEEEEEEETTEEEECCCSCSCGGGGSCEEEEEECTTSCEEEE-ESS-CEEEEETTTTEE-EEECGGGTCSCSC
T ss_pred EEEeC-CceEEEeCCCCeEEEecCCCCCCCCCCeeEEEEECCCCCEEEE-eCC-CceeECCCCCcE-EEeCCCCCCchhh
Confidence 67776 5578888765542 11 0 12246889999999985444 444 588999877654 34432211 112
Q ss_pred eeeeEecCCCceEEeecCCCeEEEEECcCccc
Q 023772 231 KTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 231 ~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~ 262 (277)
+......++|.+-+++ . +-|..||..+++.
T Consensus 588 i~~i~~d~~g~lWi~t-~-~Gl~~~~~~~~~~ 617 (795)
T 4a2l_A 588 VYGILEDSFGRLWLST-N-RGISCFNPETEKF 617 (795)
T ss_dssp EEEEEECTTSCEEEEE-T-TEEEEEETTTTEE
T ss_pred eEEEEECCCCCEEEEc-C-CceEEEcCCCCcE
Confidence 2333445566655544 3 4477788776543
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.60 E-value=5e-06 Score=74.32 Aligned_cols=187 Identities=12% Similarity=0.126 Sum_probs=119.3
Q ss_pred CCcEEEEcCCCCeeEEEEeccC-------------------------------ccEEEEEEcCCCCEEEEEeCCC-----
Q 023772 39 DRTIRLWNPHRGIHIKTYKSHG-------------------------------REVRDVHVTADNSKLISCGGDR----- 82 (277)
Q Consensus 39 d~~v~iwd~~~~~~~~~~~~h~-------------------------------~~v~~~~~~~~~~~l~t~s~d~----- 82 (277)
++.|..+|..+|+.+-.+.... .....+++.++.++++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5899999999999887775311 0112467888888888887766
Q ss_pred --------------cEEEEECCCCceeEEeec--cc-------CceeEEEEecCCC---EEEEEeCCCcEEEEeCccCCC
Q 023772 83 --------------QIFYWDVSTGRVIRKFRG--HE-------SEVNAVKFNEYSS---VVVSAGYDQSLRAWDCRSHST 136 (277)
Q Consensus 83 --------------~v~~wd~~~~~~~~~~~~--h~-------~~v~~i~~~~~~~---~l~s~~~d~~i~iwd~~~~~~ 136 (277)
.|..+|.++|+.+..++. |. .+.....+..+++ .++.++.+|.+.++|..+++.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 499999999999888764 22 2333333334554 688899999999999876543
Q ss_pred cce---------Eeecc-ccCc--------------------------EEEEEecCCeEEE-------------------
Q 023772 137 EPI---------QIIDS-FQDS--------------------------VMSVCLTKTEIIG------------------- 161 (277)
Q Consensus 137 ~~~---------~~~~~-~~~~--------------------------~~~~~~~~~~~~~------------------- 161 (277)
... ..+.. ...+ ..++......++.
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 200 00000 0000 0111111111111
Q ss_pred -----------------eecCCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 162 -----------------GSVDGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 162 -----------------g~~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
...+|.|..||+.+++..-. ....+.....+...+..++.++.|+.++.||.++++.+..+.
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEec
Confidence 11347899999998875432 233344444455578889999999999999999999998876
Q ss_pred cc
Q 023772 224 GH 225 (277)
Q Consensus 224 ~~ 225 (277)
..
T Consensus 497 ~~ 498 (668)
T 1kv9_A 497 AQ 498 (668)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 256
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.59 E-value=1.9e-05 Score=68.42 Aligned_cols=195 Identities=13% Similarity=0.100 Sum_probs=117.9
Q ss_pred CCCEEEEE-eCCCcEEEEECCCCceeEEeec-ccCceeEEEE-e-cCCCEEEEEe------------------CCCcEEE
Q 023772 71 DNSKLISC-GGDRQIFYWDVSTGRVIRKFRG-HESEVNAVKF-N-EYSSVVVSAG------------------YDQSLRA 128 (277)
Q Consensus 71 ~~~~l~t~-s~d~~v~~wd~~~~~~~~~~~~-h~~~v~~i~~-~-~~~~~l~s~~------------------~d~~i~i 128 (277)
++++++.. ..+.+|.+.|+.+.++...+.- .......+.+ . |++++++.++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 67776555 4567899999999987773321 2245677887 4 8999988874 3457788
Q ss_pred EeCccCCCcceEeeccccCcEEEEEecCCeEEEeecC--------------------------------------CcEEE
Q 023772 129 WDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD--------------------------------------GTVRT 170 (277)
Q Consensus 129 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d--------------------------------------~~i~i 170 (277)
.|..+............+.. ..+..++..+++.+.+ +.+.+
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~-~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDN-CDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESSCCCC-EEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCCCccc-eEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 88765322111111111111 1222233333333221 24667
Q ss_pred EEccC--Ccc-c-ccCCCCCeeEEEEeCCCCEEEEEe-cCCeEEEEECCCCc------------eEEEEeccccceeeee
Q 023772 171 FDIRV--GRE-L-SDDLGQPVNCISMSNDGNCILASC-LDSTLRLLDRSTGE------------LLQEYKGHICKSFKTD 233 (277)
Q Consensus 171 ~d~~~--~~~-~-~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~wd~~~~~------------~~~~~~~~~~~~~~~~ 233 (277)
.|.++ ++. + ....+....++.++|||+++++++ .+.++.++|+.+.+ .+.....- .-...
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG---~gP~h 335 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG---LGPLH 335 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC---SCEEE
T ss_pred EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC---CCcce
Confidence 77766 322 1 112234567899999999876654 67899999998653 22222211 12355
Q ss_pred eEecCCCceEEeecCCCeEEEEECcC----------ccceeeeccC
Q 023772 234 CCLTNSDAHVTGGSEDGYIYFWDLVD----------ASVVAKFKAH 269 (277)
Q Consensus 234 ~~~~~~~~~l~sgs~d~~i~iwd~~~----------~~~~~~~~~h 269 (277)
.+|+++|....+...|++|..||+.. ...+.++..|
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 67899994444677899999999988 4566777665
No 257
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=0.00046 Score=62.84 Aligned_cols=238 Identities=11% Similarity=0.106 Sum_probs=141.6
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEe-------ccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK-------SHGREVRDVHVTADNSKLISCGGDRQIFYWDVST 91 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~ 91 (277)
..|.++...++|.+.+.. .+ -+.+||..+++...... .....|.++...+++...+ |...+-+.++|..+
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEE-EESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEE-EeCCCCeEEECCCC
Confidence 468888888888776654 34 68999987765432211 1235689998887765444 55545688899876
Q ss_pred CceeEEee--------------cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEee-------ccccCcEE
Q 023772 92 GRVIRKFR--------------GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQII-------DSFQDSVM 150 (277)
Q Consensus 92 ~~~~~~~~--------------~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~ 150 (277)
++...... -....|.++...+++.+-+ |+.++-|..++............ ......+.
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 366 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWI-GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS 366 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEE-EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEE-EecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE
Confidence 65322111 1245788888888887655 55566688888764322111100 01224577
Q ss_pred EEEecC-CeEEEeecCCcEEEEEccCCcccc-----cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEec
Q 023772 151 SVCLTK-TEIIGGSVDGTVRTFDIRVGRELS-----DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG 224 (277)
Q Consensus 151 ~~~~~~-~~~~~g~~d~~i~i~d~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 224 (277)
++..++ ..+..|+.++-|..||..++.... ......|.++..+++|. |..|..++.+..+|..+++.. .+..
T Consensus 367 ~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~ 444 (781)
T 3v9f_A 367 SVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQ-IIEL 444 (781)
T ss_dssp EEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEE-ECCS
T ss_pred EEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEE-Eecc
Confidence 777765 458888877778889876543211 11235688999888887 455777777999999877543 3321
Q ss_pred c-ccceeeeeeEecCCCceEEeecCCCeEEEEECcCcccee
Q 023772 225 H-ICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVA 264 (277)
Q Consensus 225 ~-~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~ 264 (277)
. .....+......+++.+.+ |+. +-|..||..+++...
T Consensus 445 ~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 445 EKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIH 483 (781)
T ss_dssp TTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCE
T ss_pred CCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEe
Confidence 1 1111223333445555444 344 458899988776543
No 258
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.47 E-value=1.5e-05 Score=72.22 Aligned_cols=193 Identities=8% Similarity=0.005 Sum_probs=108.9
Q ss_pred ccCC-cEEEEEEe-CCCCEEEEE-eCC----CcEEEEcCCCC-eeEE-EEeccCccEEEEEEcCCCCEEEEEeCC-----
Q 023772 16 GHEG-AVLAARFN-GDGNYCLSC-GKD----RTIRLWNPHRG-IHIK-TYKSHGREVRDVHVTADNSKLISCGGD----- 81 (277)
Q Consensus 16 ~H~~-~V~~~~~~-~~~~~l~s~-s~d----~~v~iwd~~~~-~~~~-~~~~h~~~v~~~~~~~~~~~l~t~s~d----- 81 (277)
+|.- .+...+|| |||++|+-. +.+ .+|+++|+.++ +.+. .+. .....+.|+|+++.|+-...|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence 3443 67889999 999988843 333 35999999988 6321 121 123568899999888776654
Q ss_pred CcEEEEECCCCce--eEEee-cccCceeEEEEecCCCEEEEEeC---CCcEEEEeCccCCCcc--eEeeccccCcEEEEE
Q 023772 82 RQIFYWDVSTGRV--IRKFR-GHESEVNAVKFNEYSSVVVSAGY---DQSLRAWDCRSHSTEP--IQIIDSFQDSVMSVC 153 (277)
Q Consensus 82 ~~v~~wd~~~~~~--~~~~~-~h~~~v~~i~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~ 153 (277)
..|..+++.+++. ...+. .......++.++|+++.|+..+. ...|.++|+....... ...............
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ 326 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence 3688889887642 22222 22334567889999998776553 3457777876542222 222222233344444
Q ss_pred -ecCCeEEEe-ecC----CcEEEEEccCCcccc---cCCCC--CeeEEEEeCCCCE-EEEEecCCe--EEEEEC
Q 023772 154 -LTKTEIIGG-SVD----GTVRTFDIRVGRELS---DDLGQ--PVNCISMSNDGNC-ILASCLDST--LRLLDR 213 (277)
Q Consensus 154 -~~~~~~~~g-~~d----~~i~i~d~~~~~~~~---~~~~~--~v~~~~~s~~~~~-l~~~~~d~~--i~~wd~ 213 (277)
..+..++.. ..+ ..|..+|+....... ..... .+..+.+. +.. +++...++. |+++|+
T Consensus 327 ~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 327 MHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred eeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 235554433 332 246666765421111 11222 34444444 444 455666775 455665
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.46 E-value=2.6e-05 Score=60.61 Aligned_cols=169 Identities=11% Similarity=0.029 Sum_probs=109.0
Q ss_pred ceeEEeeccc--CceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEE-eecCCcEE
Q 023772 93 RVIRKFRGHE--SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIG-GSVDGTVR 169 (277)
Q Consensus 93 ~~~~~~~~h~--~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~d~~i~ 169 (277)
+.+.++. |. .-...+.|.. +.+..+.+.+|.|+.+|+.+.+..... +.... ....+.+.++.++. .-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~-FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNI-FAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC-CEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc-ceeEEEEeCCEEEEEEccCCEEE
Confidence 4455663 43 3347888874 678888889999999999887654433 33211 12335556666544 44578999
Q ss_pred EEEccCCcccccC-CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccce---eeeeeEecCCCceEEe
Q 023772 170 TFDIRVGRELSDD-LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS---FKTDCCLTNSDAHVTG 245 (277)
Q Consensus 170 i~d~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~s 245 (277)
+||..+.+.+... ....-..+ .++++.|+.+..++.|+++|..+.+.+..+.-..... ......+. +|...+.
T Consensus 120 V~D~~Tl~~~~ti~~~~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan 196 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYAN 196 (268)
T ss_dssp EEETTTTEEEEEEECSSCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EEECCcCcEEEEEeCCCceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEE
Confidence 9999887655331 11111233 3567788887778999999999998887765321111 11112222 5655555
Q ss_pred ecCCCeEEEEECcCccceeeecc
Q 023772 246 GSEDGYIYFWDLVDASVVAKFKA 268 (277)
Q Consensus 246 gs~d~~i~iwd~~~~~~~~~~~~ 268 (277)
...++.|.+.|..++++++.+..
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEEC
T ss_pred ECCCCeEEEEeCCCCcEEEEEEC
Confidence 55688999999999999988864
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.43 E-value=5e-05 Score=58.46 Aligned_cols=169 Identities=13% Similarity=0.023 Sum_probs=105.3
Q ss_pred ceeEEeeccc--CceeEEEEecCCCEEEEEeCCC--cEEEEeCccCCCcceEeeccccCcEEEEEecCCeEE-EeecCCc
Q 023772 93 RVIRKFRGHE--SEVNAVKFNEYSSVVVSAGYDQ--SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEII-GGSVDGT 167 (277)
Q Consensus 93 ~~~~~~~~h~--~~v~~i~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~d~~ 167 (277)
+++.++ .|. .-...+.|.. +.+..+.+.+| .|+.+|+.+........+..... -..+.+.++.+. ..-.++.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f-geGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF-GAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC-EEEEEEETTEEEEEESSSSE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc-eeEEEEeCCEEEEEEeeCCE
Confidence 455666 453 4567899987 56777777754 89999998765433322222211 133444555544 4456789
Q ss_pred EEEEEccCCcccccC-CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccce---eeeeeEecCCCceE
Q 023772 168 VRTFDIRVGRELSDD-LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS---FKTDCCLTNSDAHV 243 (277)
Q Consensus 168 i~i~d~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l 243 (277)
+.+||..+.+.+... .+..-..+ .+++..|+.+..++.|.++|..+.+.++.+.-..... ......+ .+|+..
T Consensus 87 v~v~D~~tl~~~~ti~~~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~-~~G~ly 163 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW-VNGELL 163 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEEE
T ss_pred EEEEECCcCcEEEEEeCCCCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE-eCCEEE
Confidence 999999887654331 11122333 4566667777778899999999998887765421110 1111111 256555
Q ss_pred EeecCCCeEEEEECcCccceeeec
Q 023772 244 TGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 244 ~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
+..-.+..|.+.|..+++++..+.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEE
T ss_pred EEECCCCeEEEEECCCCCEEEEEE
Confidence 554567799999999999998877
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.43 E-value=4.1e-05 Score=67.29 Aligned_cols=196 Identities=15% Similarity=0.167 Sum_probs=122.0
Q ss_pred CCEEEEEeC-CCcEEEEEC-CCCceeEEeecccCc-----------eeEEEEecCCCE----EEEEeCCCcEEEEeCccC
Q 023772 72 NSKLISCGG-DRQIFYWDV-STGRVIRKFRGHESE-----------VNAVKFNEYSSV----VVSAGYDQSLRAWDCRSH 134 (277)
Q Consensus 72 ~~~l~t~s~-d~~v~~wd~-~~~~~~~~~~~h~~~-----------v~~i~~~~~~~~----l~s~~~d~~i~iwd~~~~ 134 (277)
+..++.++. ++.|.-+|. ++|+.+.++...... ...+.+.|.+.. ++.++.|+.+..+|..+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 466777777 899999999 899998877543211 123455333334 788889999999998776
Q ss_pred CCcceEeecccc--CcEE-EEEecCCeEEEee------cCCcEEEEEccCCccccc-CCCC-------------------
Q 023772 135 STEPIQIIDSFQ--DSVM-SVCLTKTEIIGGS------VDGTVRTFDIRVGRELSD-DLGQ------------------- 185 (277)
Q Consensus 135 ~~~~~~~~~~~~--~~~~-~~~~~~~~~~~g~------~d~~i~i~d~~~~~~~~~-~~~~------------------- 185 (277)
............ ..+. ........++.++ .++.|+-+|.++++.+-. ....
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g 221 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYG 221 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred CEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccc
Confidence 432222211100 0110 0011234555555 378999999988875321 1000
Q ss_pred --------------------CeeEEEEeCCCCEEEEEecC----------------CeEEEEECCCCceEEEEeccccce
Q 023772 186 --------------------PVNCISMSNDGNCILASCLD----------------STLRLLDRSTGELLQEYKGHICKS 229 (277)
Q Consensus 186 --------------------~v~~~~~s~~~~~l~~~~~d----------------~~i~~wd~~~~~~~~~~~~~~~~~ 229 (277)
....++++++...+..+..+ +.|..+|..+|+.+..+.......
T Consensus 222 ~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~ 301 (599)
T 1w6s_A 222 QKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDE 301 (599)
T ss_dssp CTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcc
Confidence 11245677777777777665 389999999999998876532111
Q ss_pred -------eeeeeEec-CCC---ceEEeecCCCeEEEEECcCccceeeec
Q 023772 230 -------FKTDCCLT-NSD---AHVTGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 230 -------~~~~~~~~-~~~---~~l~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
........ .+| ..++.++.+|.+++.|..+|+++-..+
T Consensus 302 wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 302 WDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 00111111 356 467788999999999999999986654
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.42 E-value=0.0003 Score=59.38 Aligned_cols=194 Identities=11% Similarity=0.108 Sum_probs=109.9
Q ss_pred cEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeC-CC----cEEEEECCCCc
Q 023772 20 AVLAARFNG-DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGG-DR----QIFYWDVSTGR 93 (277)
Q Consensus 20 ~V~~~~~~~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~-d~----~v~~wd~~~~~ 93 (277)
....++++| ++..|+.+...+.|+.+|+..+.... +.........+++++++++|+.+.. ++ .+...+.+ +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 346789997 45556665555889999988765443 3334566889999999996655543 22 34444433 32
Q ss_pred ee--EEeecccCceeEEEEec-CCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEe--cCCe-EEEeecCCc
Q 023772 94 VI--RKFRGHESEVNAVKFNE-YSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL--TKTE-IIGGSVDGT 167 (277)
Q Consensus 94 ~~--~~~~~h~~~v~~i~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~g~~d~~ 167 (277)
.. ..+.. ......+++.| ++.++++-..++.|..++.............. ......+.+ +++. +++-...+.
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECCCCE
Confidence 21 22222 23346688999 67777777778899999976432111111111 112233444 4453 444456678
Q ss_pred EEEEEccCC--c-----ccccC---------------CCCCee-EEEEe--------CCCCEEEEEecCCeEEEEECCCC
Q 023772 168 VRTFDIRVG--R-----ELSDD---------------LGQPVN-CISMS--------NDGNCILASCLDSTLRLLDRSTG 216 (277)
Q Consensus 168 i~i~d~~~~--~-----~~~~~---------------~~~~v~-~~~~s--------~~~~~l~~~~~d~~i~~wd~~~~ 216 (277)
|..++.... + .+... .. ... .+++. ++|..+++-...+.|+.++. .+
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~-~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G 371 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMH-APRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QG 371 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBS-SEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TS
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeC-CCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CC
Confidence 888776421 1 01000 11 123 45553 44666666666778888884 45
Q ss_pred ceE
Q 023772 217 ELL 219 (277)
Q Consensus 217 ~~~ 219 (277)
+..
T Consensus 372 ~v~ 374 (430)
T 3tc9_A 372 RVT 374 (430)
T ss_dssp EEE
T ss_pred cEE
Confidence 443
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.42 E-value=0.00059 Score=62.08 Aligned_cols=238 Identities=10% Similarity=0.026 Sum_probs=139.5
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEe-------ccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK-------SHGREVRDVHVTADNSKLISCGGDRQIFYWDVST 91 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~ 91 (277)
..|.++...++|.+.+ +..++-|..||..+++...... .....|.++...+++...+.. .+ -+..||..+
T Consensus 163 ~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~ 239 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGT-SK-GLALFNANT 239 (781)
T ss_dssp CCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEE-TT-EEEEEETTT
T ss_pred cceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEe-CC-cHheECCCC
Confidence 4577887777776655 4555568889987765432211 113468899888887766644 44 589999877
Q ss_pred CceeEEee-------cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEe-------e-----ccccCcEEEE
Q 023772 92 GRVIRKFR-------GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQI-------I-----DSFQDSVMSV 152 (277)
Q Consensus 92 ~~~~~~~~-------~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------~-----~~~~~~~~~~ 152 (277)
++...... .....|.++...+++.+.+ |+..+-+.++|........... . ......+.++
T Consensus 240 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i 318 (781)
T 3v9f_A 240 ETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYI 318 (781)
T ss_dssp TEEEC-----------CCCCEEEEEECTTSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEE
T ss_pred CcEEEEEcCCCccccccCceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEE
Confidence 65432111 1245688888888776655 4553458888876543221111 0 0123456777
Q ss_pred EecCC-eEEEeecCCcEEEEEccCCcc--cc---------cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEE
Q 023772 153 CLTKT-EIIGGSVDGTVRTFDIRVGRE--LS---------DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQ 220 (277)
Q Consensus 153 ~~~~~-~~~~g~~d~~i~i~d~~~~~~--~~---------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~ 220 (277)
..+.. .+..|+.++-|..|+...... +. ......|.++..+++|. |..|..++.|..||..+++..
T Consensus 319 ~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~- 396 (781)
T 3v9f_A 319 FQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAI- 396 (781)
T ss_dssp EECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEE-
T ss_pred EEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEE-
Confidence 66654 488888888888888764421 11 01234689999998887 556666677999998765432
Q ss_pred EEec--cccceeeeeeEecCCCceEEeecCCCeEEEEECcCccce
Q 023772 221 EYKG--HICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 221 ~~~~--~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~ 263 (277)
.+.. ......+...+..+++.+.+ |+.++-+..+|..+++..
T Consensus 397 ~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 397 YNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp CC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE
T ss_pred EccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE
Confidence 2211 00111223333344555444 566667888988776543
No 264
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.39 E-value=0.0001 Score=64.59 Aligned_cols=185 Identities=15% Similarity=0.115 Sum_probs=111.8
Q ss_pred CCcEEEEcCCCCeeEEEEeccCcc-------------------------------------E-EEEEEcCCCCEEEEEeC
Q 023772 39 DRTIRLWNPHRGIHIKTYKSHGRE-------------------------------------V-RDVHVTADNSKLISCGG 80 (277)
Q Consensus 39 d~~v~iwd~~~~~~~~~~~~h~~~-------------------------------------v-~~~~~~~~~~~l~t~s~ 80 (277)
++.|..+|..+|+.+-.+...... + ..+++.++...++.+..
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g 254 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG 254 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECC
Confidence 799999999999988776542211 0 13566676667766543
Q ss_pred C----------------CcEEEEECCCCceeEEeecc----------cCceeEEEEecCCC---EEEEEeCCCcEEEEeC
Q 023772 81 D----------------RQIFYWDVSTGRVIRKFRGH----------ESEVNAVKFNEYSS---VVVSAGYDQSLRAWDC 131 (277)
Q Consensus 81 d----------------~~v~~wd~~~~~~~~~~~~h----------~~~v~~i~~~~~~~---~l~s~~~d~~i~iwd~ 131 (277)
+ +.|..+|.++|+.+..++.. ..++. +....+++ .++.++.+|.+.++|.
T Consensus 255 ~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~ 333 (571)
T 2ad6_A 255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNR 333 (571)
T ss_dssp CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEET
T ss_pred CCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEEC
Confidence 2 36999999999998877532 12222 22334663 5777889999999998
Q ss_pred ccCCCcceEeecc-c----------cCcE----------------------------EEEEecCCeEEEee---------
Q 023772 132 RSHSTEPIQIIDS-F----------QDSV----------------------------MSVCLTKTEIIGGS--------- 163 (277)
Q Consensus 132 ~~~~~~~~~~~~~-~----------~~~~----------------------------~~~~~~~~~~~~g~--------- 163 (277)
.+.+......+.. . ..++ .++.+....++...
T Consensus 334 ~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~ 413 (571)
T 2ad6_A 334 ENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEP 413 (571)
T ss_dssp TTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEE
T ss_pred CCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccc
Confidence 7653221111110 0 0000 11111112222221
Q ss_pred ----------------------------cCCcEEEEEccCCccccc-CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECC
Q 023772 164 ----------------------------VDGTVRTFDIRVGRELSD-DLGQPVNCISMSNDGNCILASCLDSTLRLLDRS 214 (277)
Q Consensus 164 ----------------------------~d~~i~i~d~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~ 214 (277)
.++.|..||+.+++..-. ....++....+...+..++.++.|+.++.||.+
T Consensus 414 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 414 FMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNK 493 (571)
T ss_dssp CCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred cccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECC
Confidence 357888999988765432 222233332333456678889999999999999
Q ss_pred CCceEEEEec
Q 023772 215 TGELLQEYKG 224 (277)
Q Consensus 215 ~~~~~~~~~~ 224 (277)
+++++..+..
T Consensus 494 tG~~lw~~~~ 503 (571)
T 2ad6_A 494 DGKELWNFKM 503 (571)
T ss_dssp TCCEEEEEEC
T ss_pred CCCEEEEEeC
Confidence 9999988864
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.36 E-value=1e-05 Score=72.16 Aligned_cols=222 Identities=8% Similarity=0.057 Sum_probs=119.8
Q ss_pred EEEEeCCCCEEEEEe-CCCcEEEEcCCCCeeEEEEeccCcc-EEEEEEcCCCCEEEEEe-CC-----CcEEEEECCCCce
Q 023772 23 AARFNGDGNYCLSCG-KDRTIRLWNPHRGIHIKTYKSHGRE-VRDVHVTADNSKLISCG-GD-----RQIFYWDVSTGRV 94 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s-~d~~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~t~s-~d-----~~v~~wd~~~~~~ 94 (277)
++++..++++++.|| .+..+.+||+.+++....-..+... -.++.+.++++.++.|+ .+ ..+.+||.++++-
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 466778899999988 4568999999887654432222222 23456667888888888 44 5689999987642
Q ss_pred eEEee-----cccCceeEEEEecCCCEEEEEeCCC---------cEEEEeCccCCCcceEeecccc---------CcEEE
Q 023772 95 IRKFR-----GHESEVNAVKFNEYSSVVVSAGYDQ---------SLRAWDCRSHSTEPIQIIDSFQ---------DSVMS 151 (277)
Q Consensus 95 ~~~~~-----~h~~~v~~i~~~~~~~~l~s~~~d~---------~i~iwd~~~~~~~~~~~~~~~~---------~~~~~ 151 (277)
.. +. .....-....+..++..++.++.|| .+..||...... ........ ....+
T Consensus 327 ~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w--~~~~~~~~~~~~~~~~~~~~~a 403 (656)
T 1k3i_A 327 TS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD--VKSAGKRQSNRGVAPDAMCGNA 403 (656)
T ss_dssp EE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE--EEEEEECEETTEECCCCBTCEE
T ss_pred ee-CCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcce--eecCCccccccccCCCCCCCce
Confidence 21 10 0000000011123445555565554 456777654321 11111100 01122
Q ss_pred EE---ecCCeEEEeecCC-----------cEEEEEccCCcc--cc--c-CCCCCeeEEEEeCCCCEEEEEecC-------
Q 023772 152 VC---LTKTEIIGGSVDG-----------TVRTFDIRVGRE--LS--D-DLGQPVNCISMSNDGNCILASCLD------- 205 (277)
Q Consensus 152 ~~---~~~~~~~~g~~d~-----------~i~i~d~~~~~~--~~--~-~~~~~v~~~~~s~~~~~l~~~~~d------- 205 (277)
+. ..+..++.|+.++ .+.+||..+..- +. . .....-.+++..|+++.++.|+.+
T Consensus 404 v~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~ 483 (656)
T 1k3i_A 404 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED 483 (656)
T ss_dssp EEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCC
T ss_pred EeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCC
Confidence 22 2344466676432 577788765431 11 1 111123455677899999998864
Q ss_pred ----CeEEEEECCCCceEEEEecccc-ceeeeeeEecCCCceEEeecC
Q 023772 206 ----STLRLLDRSTGELLQEYKGHIC-KSFKTDCCLTNSDAHVTGGSE 248 (277)
Q Consensus 206 ----~~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~sgs~ 248 (277)
..+.+||..+++... +..... ......+.+.++++.++.|+.
T Consensus 484 ~~~~~~v~~ydp~t~~W~~-~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 484 STPVFTPEIYVPEQDTFYK-QNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CSBCCCCEEEEGGGTEEEE-CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCcccceEEEcCCCCceee-cCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468899998765432 221111 111122345688998888774
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.35 E-value=0.0007 Score=55.45 Aligned_cols=241 Identities=6% Similarity=-0.055 Sum_probs=138.4
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCceeEE
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVSTGRVIRK 97 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~~~~~~ 97 (277)
+...|.+..+++.++++ ....|+..++........+. ....+..++|++.++.|+ +-...+.|..++++.+.....
T Consensus 34 d~~~C~~~~~~~~ll~~--~~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 110 (349)
T 3v64_C 34 DRRSCKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 110 (349)
T ss_dssp TSSCEEESSSCCEEEEE--CBSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCcccccccCceeEee--cccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE
Confidence 33445555554433333 34568888876654443333 334578999997666665 445678899999887654333
Q ss_pred eecccCceeEEEEecC-CCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--Ce-EEEeecC-CcEEEEE
Q 023772 98 FRGHESEVNAVKFNEY-SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TE-IIGGSVD-GTVRTFD 172 (277)
Q Consensus 98 ~~~h~~~v~~i~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~g~~d-~~i~i~d 172 (277)
..........+++.+. +++..+-...+.|.+.++.... ..............+.+++ .. +++-... +.|..++
T Consensus 111 ~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~--~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 111 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc--eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 3323344577899875 4455666667889999876432 1222222223344555553 33 3444444 6788888
Q ss_pred ccCCcc--cccCCCCCeeEEEEeCCCCEE-EEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCC
Q 023772 173 IRVGRE--LSDDLGQPVNCISMSNDGNCI-LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSED 249 (277)
Q Consensus 173 ~~~~~~--~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d 249 (277)
+..... +........+.++++|++..| ++-...+.|..+|+........+.... ......++ .++....+-...
T Consensus 189 ~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~--~~P~giav-~~~~ly~td~~~ 265 (349)
T 3v64_C 189 MDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGL--PHPFAITV-FEDSLYWTDWHT 265 (349)
T ss_dssp TTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SSEEEEEE-ETTEEEEEETTT
T ss_pred CCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCC--CCceEEEE-ECCEEEEecCCC
Confidence 754321 111122357899999866555 444566789999986433322222221 12222334 345555566677
Q ss_pred CeEEEEECcCccceeeec
Q 023772 250 GYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 250 ~~i~iwd~~~~~~~~~~~ 267 (277)
+.|..+|..+|+.+..+.
T Consensus 266 ~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 266 KSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TEEEEEETTTCCSCEEEE
T ss_pred CeEEEEEccCCCccEEec
Confidence 888888877777666654
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.32 E-value=0.00072 Score=54.14 Aligned_cols=203 Identities=9% Similarity=0.063 Sum_probs=116.4
Q ss_pred CeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeCCC--cEE
Q 023772 50 GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ--SLR 127 (277)
Q Consensus 50 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~--~i~ 127 (277)
.+.+..+... .....++|+++++.+++-..++.|..||.+.+ ....+. -......+++.++++++++..... .|.
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~ 98 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVV 98 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEE
Confidence 3445555432 46788999999887777768899999998754 333232 234678899999999776654432 366
Q ss_pred EEeCccCCCcceEeeccccCcEEEEE-ecCCeEE-EeecCCcEEEEEccCCc-ccc---------cCCC--CCeeEEEEe
Q 023772 128 AWDCRSHSTEPIQIIDSFQDSVMSVC-LTKTEII-GGSVDGTVRTFDIRVGR-ELS---------DDLG--QPVNCISMS 193 (277)
Q Consensus 128 iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~d~~i~i~d~~~~~-~~~---------~~~~--~~v~~~~~s 193 (277)
.+|..+.....+...... ....... +....++ +-..++.|..+|...++ .+. .... ...+.+ +
T Consensus 99 ~~d~~~g~~~~~~~~~~~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDA-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp EEECTTSCEEEEEECTTC-SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred EEcCCCCeEEEEEeCCCc-cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 666554432221111111 1111121 2233333 33357888888876431 110 1111 234555 7
Q ss_pred CCCCEE-EEEecCCeEEEEECCC-Cce--EEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccc
Q 023772 194 NDGNCI-LASCLDSTLRLLDRST-GEL--LQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 194 ~~~~~l-~~~~~d~~i~~wd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~ 262 (277)
|++++| ++-...+.|+.||+.. ++. ...+... ......++.++|++.++....+.|..+|.. +++
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 888755 4455678999999864 332 1222111 123345677888877776667889999975 655
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.31 E-value=0.0006 Score=54.99 Aligned_cols=189 Identities=12% Similarity=0.066 Sum_probs=107.2
Q ss_pred cEEEEEEeC-CCCEEEEEeCCCcEEEEcCCCCeeEEEEec-----cCccEEEEEEcC-CCCEEEEEeC------------
Q 023772 20 AVLAARFNG-DGNYCLSCGKDRTIRLWNPHRGIHIKTYKS-----HGREVRDVHVTA-DNSKLISCGG------------ 80 (277)
Q Consensus 20 ~V~~~~~~~-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~-~~~~l~t~s~------------ 80 (277)
.+..+++.+ +|+++ .+...+.+..+|..++.. ..+.. .......+++.+ ++...++-..
T Consensus 81 ~p~gi~~~~~~g~l~-v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 81 RTYDISYNLQNNQLY-IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CEEEEEEETTTTEEE-EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCceEEEcCCCCcEE-EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 468899997 66544 444445588899776542 22221 113468899999 8877776532
Q ss_pred -----CCcEEEEECCCCceeEEeecccCceeEEEEecCCCEE-EEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEe
Q 023772 81 -----DRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVV-VSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCL 154 (277)
Q Consensus 81 -----d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
++.|..+|..+++...... .-...+.++++++++.+ ++-..++.|..|++..........+..... ...+..
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~ 236 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKR 236 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEE
T ss_pred cccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEE
Confidence 3678899987776432222 22344679999998854 454667889999986432111122111222 344455
Q ss_pred cCCe-EEEeec-----------CCcEEEEEccCCcccc---cCC---CCCeeEEEEeCCCCEEEEEecCCeEEEEECC
Q 023772 155 TKTE-IIGGSV-----------DGTVRTFDIRVGRELS---DDL---GQPVNCISMSNDGNCILASCLDSTLRLLDRS 214 (277)
Q Consensus 155 ~~~~-~~~g~~-----------d~~i~i~d~~~~~~~~---~~~---~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~ 214 (277)
+++. ++.+.. .+.|..+|.. ++.+. ... -..+.++++ .++..+++....+.|..+++.
T Consensus 237 d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 237 NADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp CTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred CCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 4432 433332 3456677753 33221 111 123555665 356555565567788888775
No 269
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.27 E-value=0.00036 Score=55.65 Aligned_cols=229 Identities=11% Similarity=0.086 Sum_probs=111.0
Q ss_pred CCCEEEEEe-CC-----CcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc----
Q 023772 29 DGNYCLSCG-KD-----RTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGD-----RQIFYWDVSTGR---- 93 (277)
Q Consensus 29 ~~~~l~s~s-~d-----~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d-----~~v~~wd~~~~~---- 93 (277)
++.+++.|| .+ ..+.+||+.+++....-..............++..++.|+.+ ..+.+||..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 345555665 32 478889988765433211111111111222356666777654 468899987755
Q ss_pred -eeEEeecccCceeEEEEecCCCEEEEEeCC-----CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecC--
Q 023772 94 -VIRKFRGHESEVNAVKFNEYSSVVVSAGYD-----QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD-- 165 (277)
Q Consensus 94 -~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-- 165 (277)
.+..+......- ++.. .++++++.|+.+ ..+.+||+.+..-..+............+...+..++.|+.+
T Consensus 94 ~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 94 YSVAPMNVRRGLA-GATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGL 171 (301)
T ss_dssp EEECCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred EECCCCCCCccce-eEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCC
Confidence 222222111111 1222 256677777654 357888876542221111111111122233344445666654
Q ss_pred ---CcEEEEEccCCc--ccccC-CCCCeeEEEEeCCCCEEEEEecC-----CeEEEEECCCCceEEEEeccccceeeeee
Q 023772 166 ---GTVRTFDIRVGR--ELSDD-LGQPVNCISMSNDGNCILASCLD-----STLRLLDRSTGELLQEYKGHICKSFKTDC 234 (277)
Q Consensus 166 ---~~i~i~d~~~~~--~~~~~-~~~~v~~~~~s~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
..+.+||+.+.+ .+... ....-.++.. .++..++.|+.+ ..+.+||..+++.... ...........+
T Consensus 172 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~ 249 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV-TSMTTPRCYVGA 249 (301)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE-CCCSSCCBSCEE
T ss_pred cccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC-CCCCCcccceeE
Confidence 458889987653 11111 1111112222 256677777654 4688999987754332 211111111112
Q ss_pred EecCCCceEEeecCC-----CeEEEEECcCccc
Q 023772 235 CLTNSDAHVTGGSED-----GYIYFWDLVDASV 262 (277)
Q Consensus 235 ~~~~~~~~l~sgs~d-----~~i~iwd~~~~~~ 262 (277)
+. -++++++.|+.+ ..+.+||.++.+.
T Consensus 250 ~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 250 TV-LRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp EE-ETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred EE-ECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 22 255665655544 4688999987654
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.23 E-value=0.0016 Score=54.91 Aligned_cols=200 Identities=11% Similarity=0.060 Sum_probs=112.3
Q ss_pred cEEEEEEeCC--CCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCC---Cc-EEEEECCCCc
Q 023772 20 AVLAARFNGD--GNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGD---RQ-IFYWDVSTGR 93 (277)
Q Consensus 20 ~V~~~~~~~~--~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d---~~-v~~wd~~~~~ 93 (277)
....++++++ +..|+.+...+.|+.+|+.++..... .........++++++++.+++-... .. +...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3568899984 34444444448999999887765443 3344568999999999955554321 12 3333332221
Q ss_pred ee-EEeecccCceeEEEEec-CCCEEEEEeCCCcEEEEeCccCCC-cceEeeccccC-cEEEEEecCCeE-EEeecCCcE
Q 023772 94 VI-RKFRGHESEVNAVKFNE-YSSVVVSAGYDQSLRAWDCRSHST-EPIQIIDSFQD-SVMSVCLTKTEI-IGGSVDGTV 168 (277)
Q Consensus 94 ~~-~~~~~h~~~v~~i~~~~-~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~-~~g~~d~~i 168 (277)
.. ..+. .-.....+++.+ ++.+.++-..++.|..+|...... ..+........ .-.++..+++.+ ++-...+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 10 1121 223345688888 677777766788899998764322 11111111111 113333344434 444556788
Q ss_pred EEEEccC--Cc-----ccccC--------------CCCCeeEEEE---------eCCCCEEEEEecCCeEEEEECCCCce
Q 023772 169 RTFDIRV--GR-----ELSDD--------------LGQPVNCISM---------SNDGNCILASCLDSTLRLLDRSTGEL 218 (277)
Q Consensus 169 ~i~d~~~--~~-----~~~~~--------------~~~~v~~~~~---------s~~~~~l~~~~~d~~i~~wd~~~~~~ 218 (277)
+.+++.. +. .+... .-.....+++ .++|.++++-...+.|+.++. ++.
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~- 375 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR- 375 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC-
Confidence 8877642 21 00000 0123667899 778887777777889999985 454
Q ss_pred EEEEe
Q 023772 219 LQEYK 223 (277)
Q Consensus 219 ~~~~~ 223 (277)
+..+.
T Consensus 376 v~t~~ 380 (433)
T 4hw6_A 376 VTTYA 380 (433)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 34443
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.22 E-value=0.00099 Score=51.80 Aligned_cols=199 Identities=11% Similarity=0.127 Sum_probs=121.5
Q ss_pred eeeccCCcEEEEEEeCCCCEEEE-EeCCCcEEEEcCCCCeeEEEEec-cCccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLS-CGKDRTIRLWNPHRGIHIKTYKS-HGREVRDVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s-~s~d~~v~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
.+.|=.+.+..++|+|++..|++ ...++.|...|.. ++.++.+.- -......+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34455567999999998776654 6778888888987 777777643 23578889999888777776667889999876
Q ss_pred CCce---eEEee------cccCceeEEEEecCCCEEEEEeCCCcEEEEeCccC-CCcceEeec---------cccCcEEE
Q 023772 91 TGRV---IRKFR------GHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSH-STEPIQIID---------SFQDSVMS 151 (277)
Q Consensus 91 ~~~~---~~~~~------~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~---------~~~~~~~~ 151 (277)
.... +.... ..+....+++++|.++.|.++.......+|..... ......+.. .......+
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5432 22221 23445689999999877777766555555555310 000111111 01112233
Q ss_pred EEecCCe-EEEeecCCcEEEEEccCCcccc---cC--------CCCCeeEEEEeCCCCEEEEEecCCeEEEEECC
Q 023772 152 VCLTKTE-IIGGSVDGTVRTFDIRVGRELS---DD--------LGQPVNCISMSNDGNCILASCLDSTLRLLDRS 214 (277)
Q Consensus 152 ~~~~~~~-~~~g~~d~~i~i~d~~~~~~~~---~~--------~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~ 214 (277)
+.+.... ++.....+.|..+|.... ... .. .-.....|+|+++|+.+++ ++-+.++.|...
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC-
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEec
Confidence 3333333 445555667777776532 111 01 1135788999999985555 677777776543
No 272
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.20 E-value=0.00093 Score=54.18 Aligned_cols=193 Identities=11% Similarity=0.245 Sum_probs=116.7
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCC-------E-EEEEeC--CCcEEEEeCccCCCcceE
Q 023772 71 DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS-------V-VVSAGY--DQSLRAWDCRSHSTEPIQ 140 (277)
Q Consensus 71 ~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~-------~-l~s~~~--d~~i~iwd~~~~~~~~~~ 140 (277)
...++++...++-+.+||+ +|+.+..+.. ..++.++.-|.-. + +++.-. +++|.+|++..... ++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-cee
Confidence 3456776777788999999 7888877753 5677777766421 2 333333 58899997632211 122
Q ss_pred eecc-------ccCcEEEEEe--cC--C--eEEEeecCCcEEEEEccC---C----ccccc-CCCCCeeEEEEeCCCCEE
Q 023772 141 IIDS-------FQDSVMSVCL--TK--T--EIIGGSVDGTVRTFDIRV---G----RELSD-DLGQPVNCISMSNDGNCI 199 (277)
Q Consensus 141 ~~~~-------~~~~~~~~~~--~~--~--~~~~g~~d~~i~i~d~~~---~----~~~~~-~~~~~v~~~~~s~~~~~l 199 (277)
.... ....+..+++ ++ . ++++...+|.+..|++.. + +.+.. ..+..+..+..++....|
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRL 194 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeE
Confidence 2211 0022333333 32 2 477778889999999842 1 22222 235678888999988899
Q ss_pred EEEecCCeEEEEECC-----CCceEEEEe-cccc-ceeeeeeEecCCCc-eEEeec-CCCeEEEEECc-Cccceeeec
Q 023772 200 LASCLDSTLRLLDRS-----TGELLQEYK-GHIC-KSFKTDCCLTNSDA-HVTGGS-EDGYIYFWDLV-DASVVAKFK 267 (277)
Q Consensus 200 ~~~~~d~~i~~wd~~-----~~~~~~~~~-~~~~-~~~~~~~~~~~~~~-~l~sgs-~d~~i~iwd~~-~~~~~~~~~ 267 (277)
+.+-+|..|..++.. +++++..+. ++.. ....+.....++++ ||++++ .++...+||.. +.+.+..|.
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 999999888777854 345665543 2211 12222222234444 555444 67789999997 677888775
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.17 E-value=0.002 Score=53.50 Aligned_cols=202 Identities=8% Similarity=-0.028 Sum_probs=120.3
Q ss_pred CcEEEEEEeCCCCEE-EEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCceeE
Q 023772 19 GAVLAARFNGDGNYC-LSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDVSTGRVIR 96 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l-~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~~~~~~~ 96 (277)
.....++|++.+..| ++-...+.|..+++..+.....+.........+++.+.+..| ++-...+.|.+.+++......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 346789999755544 455567888889887655444443333456788998765555 555567789998887544333
Q ss_pred EeecccCceeEEEEecCCCEEEEE-eCC-CcEEEEeCccCCCcceEeeccccCcEEEEEec--CCeE-EEeecCCcEEEE
Q 023772 97 KFRGHESEVNAVKFNEYSSVVVSA-GYD-QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEI-IGGSVDGTVRTF 171 (277)
Q Consensus 97 ~~~~h~~~v~~i~~~~~~~~l~s~-~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~g~~d~~i~i~ 171 (277)
.+.........+++.|.+..|+.+ ..+ +.|...++.... ..............+.++ ...| ++-+..+.|..+
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC--cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 333333566889999866554444 344 678888765432 122222222223445554 3344 444556788888
Q ss_pred EccCCcc--cccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 172 DIRVGRE--LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 172 d~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
|+..... +..........+++ .++..+.+-...+.|..+|..+++.+..+.
T Consensus 274 d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 274 NLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp CTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 8754321 21112235677888 355566676778889999976676655554
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.17 E-value=0.00031 Score=63.71 Aligned_cols=192 Identities=12% Similarity=0.084 Sum_probs=102.5
Q ss_pred cEEEEEEc-CCCCEEEEEe-CC----CcEEEEECCCC-ceeEE-eecccCceeEEEEecCCCEEEEEeCC-----CcEEE
Q 023772 62 EVRDVHVT-ADNSKLISCG-GD----RQIFYWDVSTG-RVIRK-FRGHESEVNAVKFNEYSSVVVSAGYD-----QSLRA 128 (277)
Q Consensus 62 ~v~~~~~~-~~~~~l~t~s-~d----~~v~~wd~~~~-~~~~~-~~~h~~~v~~i~~~~~~~~l~s~~~d-----~~i~i 128 (277)
.+....|+ |++++|+-+. .+ .+|+++|++++ +.+.. +.. ...++.|+||++.|+....| ..|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 9999887443 22 35999999998 63321 211 13467899999888777765 35777
Q ss_pred EeCccCCCcceEeecc-ccCcEEEEEecC--CeEEEeec---CCcEEEEEccCCc------ccccCCCCCeeEEEEeCCC
Q 023772 129 WDCRSHSTEPIQIIDS-FQDSVMSVCLTK--TEIIGGSV---DGTVRTFDIRVGR------ELSDDLGQPVNCISMSNDG 196 (277)
Q Consensus 129 wd~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~g~~---d~~i~i~d~~~~~------~~~~~~~~~v~~~~~s~~~ 196 (277)
+++.+.......++.. .......+.+++ ..++..+. ...|.++|+..+. .+.........++.|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 7776543322333321 122234444544 44554332 3457788887642 1222223345555555444
Q ss_pred CEEEEEecC----CeEEEEECCCCceEEE-EeccccceeeeeeEecCCCceEEeecCCCeEE--EEEC
Q 023772 197 NCILASCLD----STLRLLDRSTGELLQE-YKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY--FWDL 257 (277)
Q Consensus 197 ~~l~~~~~d----~~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~--iwd~ 257 (277)
.+++.+..+ ..|..+|+.+....+. +..+..........+. ++.++++...|+..+ ++|+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 444444433 3677777764211122 2222211122222232 345566777788644 5564
No 275
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.17 E-value=0.00032 Score=61.63 Aligned_cols=193 Identities=17% Similarity=0.168 Sum_probs=117.2
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEeecccCc---------eeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEee
Q 023772 72 NSKLISCGGDRQIFYWDVSTGRVIRKFRGHESE---------VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQII 142 (277)
Q Consensus 72 ~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~---------v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 142 (277)
+..++.++.++.|.-+|.++|+.+.++...... ...+.+ .+..++.++.|+.+..+|..+++.......
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 345655666445999999999998877644221 012222 245777788999999999877654322222
Q ss_pred ccc-------cCcEEEEEecC----C-eEEEee------cCCcEEEEEccCCcccccCCC--------------------
Q 023772 143 DSF-------QDSVMSVCLTK----T-EIIGGS------VDGTVRTFDIRVGRELSDDLG-------------------- 184 (277)
Q Consensus 143 ~~~-------~~~~~~~~~~~----~-~~~~g~------~d~~i~i~d~~~~~~~~~~~~-------------------- 184 (277)
... ..++. . .. . .++.+. .++.|.-+|..+++.+-....
T Consensus 146 ~~~~~~~~~~~sP~v--~-~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g 222 (582)
T 1flg_A 146 ADHGAGYTMTGAPTI--V-KDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVK 222 (582)
T ss_dssp SCGGGTCBCCSCCEE--E-ECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTT
T ss_pred CCCCcCcccccCCEE--e-CCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccc
Confidence 111 11111 1 11 1 455554 378899899887764321100
Q ss_pred -----------------------CCeeEEEEeCCCCEEEEEec--------------------C----CeEEEEECCCCc
Q 023772 185 -----------------------QPVNCISMSNDGNCILASCL--------------------D----STLRLLDRSTGE 217 (277)
Q Consensus 185 -----------------------~~v~~~~~s~~~~~l~~~~~--------------------d----~~i~~wd~~~~~ 217 (277)
.....++++|+...+..+.. | +.|..+|..+|+
T Consensus 223 ~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~ 302 (582)
T 1flg_A 223 APSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGE 302 (582)
T ss_dssp CTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCC
T ss_pred cccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCC
Confidence 01134677787777776653 2 589999999999
Q ss_pred eEEEEec--cccc-----eeeeeeEec-CCC---ceEEeecCCCeEEEEECcCccceeeeccC
Q 023772 218 LLQEYKG--HICK-----SFKTDCCLT-NSD---AHVTGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 218 ~~~~~~~--~~~~-----~~~~~~~~~-~~~---~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
.+..+.. |... ......... .+| ..++.++.+|.++++|..+|+++-.++..
T Consensus 303 ~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 303 VKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp EEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred EEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccc
Confidence 9988753 2110 001111111 356 37888999999999999999998766543
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.16 E-value=0.002 Score=52.74 Aligned_cols=200 Identities=9% Similarity=-0.029 Sum_probs=119.2
Q ss_pred cEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCceeEE
Q 023772 20 AVLAARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDVSTGRVIRK 97 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~~~~~~~~ 97 (277)
....++|++....|+ +-...+.|..+++..+.....+.........+++.+.+..| ++-...+.|.+.+++.......
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 153 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence 357889997555544 55567888888887654444443333456789998765555 5556678999999875543322
Q ss_pred eecccCceeEEEEecCCCE-EEEEeCC-CcEEEEeCccCCCcceEeeccccCcEEEEEec--CCeE-EEeecCCcEEEEE
Q 023772 98 FRGHESEVNAVKFNEYSSV-VVSAGYD-QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEI-IGGSVDGTVRTFD 172 (277)
Q Consensus 98 ~~~h~~~v~~i~~~~~~~~-l~s~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~g~~d~~i~i~d 172 (277)
....-....++++.|.+.. +.+-..+ +.|...++..... .............+.++ ...+ ++-...+.|..+|
T Consensus 154 ~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~--~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 154 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc--EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 3333355688999986554 4444444 7788887754321 11112112223455554 3344 4445567888888
Q ss_pred ccCCc--ccccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEE
Q 023772 173 IRVGR--ELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEY 222 (277)
Q Consensus 173 ~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 222 (277)
+.... .+..........+++. ++..+.+-...+.|..+|..+++.+..+
T Consensus 232 ~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 232 LDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 76432 1111222356778883 5556666667788988886666554444
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.15 E-value=0.0018 Score=52.15 Aligned_cols=223 Identities=8% Similarity=-0.016 Sum_probs=128.5
Q ss_pred CcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCC---CceeEE-eecccCceeEEEEecCC
Q 023772 40 RTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVST---GRVIRK-FRGHESEVNAVKFNEYS 114 (277)
Q Consensus 40 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~---~~~~~~-~~~h~~~v~~i~~~~~~ 114 (277)
..|+..|+.+......+. ....+..++|++.++.|+ +-...+.|..++++. +..... +...-.....+++.+.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 578888888766554443 345678999998766555 445678999999876 122222 22222345788998654
Q ss_pred -CEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeE-EEeecC-CcEEEEEccCCcc--cccCCCCCe
Q 023772 115 -SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEI-IGGSVD-GTVRTFDIRVGRE--LSDDLGQPV 187 (277)
Q Consensus 115 -~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d-~~i~i~d~~~~~~--~~~~~~~~v 187 (277)
++.++-..++.|.+.++..... .............+.+++ ..+ ++.... +.|..+++..... +....-...
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P 166 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 166 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSE--EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE
T ss_pred CeEEEEECCCCEEEEEeCCCCce--EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCc
Confidence 4555656788899998764321 112221222344555543 333 333332 6787777653221 111223457
Q ss_pred eEEEEeCCCCEEE-EEecCCeEEEEECCCCceEEEE-eccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceee
Q 023772 188 NCISMSNDGNCIL-ASCLDSTLRLLDRSTGELLQEY-KGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAK 265 (277)
Q Consensus 188 ~~~~~s~~~~~l~-~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~ 265 (277)
+.+++++++..|. +-+..+.|..+|+.... .+.+ ............++. .+.+..+-...+.|..+|..+++.+..
T Consensus 167 ~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNL 244 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred eEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEE
Confidence 8999998766554 44566799999996433 2333 211111122233343 355556667788999999888877666
Q ss_pred ec
Q 023772 266 FK 267 (277)
Q Consensus 266 ~~ 267 (277)
+.
T Consensus 245 i~ 246 (316)
T 1ijq_A 245 LA 246 (316)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.14 E-value=0.0024 Score=53.03 Aligned_cols=237 Identities=7% Similarity=-0.044 Sum_probs=136.0
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCceeEEeecc
Q 023772 23 AARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVSTGRVIRKFRGH 101 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~~~~~~~~~h 101 (277)
|.+..++ .+|+- +....|+..++..+....... ....+..++|.+.++.|+ +-...+.|..++++.+.....+...
T Consensus 81 C~~~~~~-~~l~~-~~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 81 CKALGPE-PVLLF-ANRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp EEECSSC-CEEEE-ECBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred ECCcccc-ceeEe-ecCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 4443443 34333 334678888887655444443 345678999997666555 4456788999998876543333323
Q ss_pred cCceeEEEEecCC-CEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeE-EEeecC-CcEEEEEccCC
Q 023772 102 ESEVNAVKFNEYS-SVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEI-IGGSVD-GTVRTFDIRVG 176 (277)
Q Consensus 102 ~~~v~~i~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d-~~i~i~d~~~~ 176 (277)
......+++.+.+ .+.++-...+.|.+.++.... ..............+.+++ ..+ ++-... +.|..+++...
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~--~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH--RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS--CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc--eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 3345678888754 455565667788888875432 1222222223344555553 333 343333 67777777543
Q ss_pred cc--cccCCCCCeeEEEEeCCCCEE-EEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEE
Q 023772 177 RE--LSDDLGQPVNCISMSNDGNCI-LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIY 253 (277)
Q Consensus 177 ~~--~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~ 253 (277)
.. +........+.++|+|++..| ++-+..+.|+.+|+........+.... ......++ ..+.+..+....+.|.
T Consensus 236 ~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~--~~P~giav-~~~~ly~td~~~~~V~ 312 (386)
T 3v65_B 236 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGL--PHPFAITV-FEDSLYWTDWHTKSIN 312 (386)
T ss_dssp SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSC--SSEEEEEE-ETTEEEEEETTTTEEE
T ss_pred CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCC--CCceEEEE-ECCEEEEeeCCCCeEE
Confidence 21 111222357899999865554 555567789999986433322232221 12223334 3455556667788899
Q ss_pred EEECcCccceeeec
Q 023772 254 FWDLVDASVVAKFK 267 (277)
Q Consensus 254 iwd~~~~~~~~~~~ 267 (277)
.+|..+|+.+..+.
T Consensus 313 ~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 313 SANKFTGKNQEIIR 326 (386)
T ss_dssp EEETTTCCSCEEEE
T ss_pred EEECCCCcceEEEc
Confidence 99977787766665
No 279
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.10 E-value=0.0012 Score=52.63 Aligned_cols=227 Identities=11% Similarity=0.120 Sum_probs=107.7
Q ss_pred CEEEEEeCC----CcEEEEcCCCCeeEEEEeccCcc-EEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCce--eEEe
Q 023772 31 NYCLSCGKD----RTIRLWNPHRGIHIKTYKSHGRE-VRDVHVTADNSKLISCGGD-----RQIFYWDVSTGRV--IRKF 98 (277)
Q Consensus 31 ~~l~s~s~d----~~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~t~s~d-----~~v~~wd~~~~~~--~~~~ 98 (277)
.+++.||.+ ..+..||+.+.+....-...... -.++.. .++..++.|+.+ ..+.+||..+.+- +..+
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 344455543 46788888876543321111111 112222 256666777654 3588899876542 2222
Q ss_pred ecccCceeEEEEecCCCEEEEEeCCC-----cEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecC-------C
Q 023772 99 RGHESEVNAVKFNEYSSVVVSAGYDQ-----SLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD-------G 166 (277)
Q Consensus 99 ~~h~~~v~~i~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-------~ 166 (277)
...... .++.. -++++++.|+.++ .+.+||+.+..-..+..+.........+......++.|+.+ .
T Consensus 96 p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 96 RDRRST-LGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS 173 (302)
T ss_dssp SSCCBS-CEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC
T ss_pred Cccccc-eEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc
Confidence 211111 11222 2566777777653 47778876532111111111111112223344445555542 3
Q ss_pred cEEEEEccCCc--ccccC-CCCCeeEEEEeCCCCEEEEEecC-----CeEEEEECCCCceEEEEeccccceeeeeeEecC
Q 023772 167 TVRTFDIRVGR--ELSDD-LGQPVNCISMSNDGNCILASCLD-----STLRLLDRSTGELLQEYKGHICKSFKTDCCLTN 238 (277)
Q Consensus 167 ~i~i~d~~~~~--~~~~~-~~~~v~~~~~s~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (277)
.+.+||+.+.+ .+... ....-.+++.. ++..++.|+.+ ..+.+||..+++... +...........++ ..
T Consensus 174 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~-~~ 250 (302)
T 2xn4_A 174 TVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNAGVC-AV 250 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEE-EE
T ss_pred EEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccCeEE-EE
Confidence 57889987653 11111 11111122222 56777777654 368899998775432 22211111111122 22
Q ss_pred CCceEEeecCC-----CeEEEEECcCccce
Q 023772 239 SDAHVTGGSED-----GYIYFWDLVDASVV 263 (277)
Q Consensus 239 ~~~~l~sgs~d-----~~i~iwd~~~~~~~ 263 (277)
++.+++.|+.+ ..+.+||..+.+..
T Consensus 251 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 251 NGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 55665555544 34899999876543
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.09 E-value=0.0026 Score=51.61 Aligned_cols=190 Identities=12% Similarity=0.317 Sum_probs=118.5
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCC----CCE--E-EEEe-C--CCcEEEEEC--CCCceeE
Q 023772 29 DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTAD----NSK--L-ISCG-G--DRQIFYWDV--STGRVIR 96 (277)
Q Consensus 29 ~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~----~~~--l-~t~s-~--d~~v~~wd~--~~~~~~~ 96 (277)
...+++...+++-+.+||+ +|+.+..+.. +.++.+.+-|+ ++. + ++.. . +++|.+|++ .+++ +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 4567777788899999999 8888888753 56777777653 222 3 3333 3 578999976 3443 44
Q ss_pred Eeec------cc-CceeEEEE--ecC-CC-EEEEEeCCCcEEEEeCccCC-----CcceEeeccccCcEEEEEecC--Ce
Q 023772 97 KFRG------HE-SEVNAVKF--NEY-SS-VVVSAGYDQSLRAWDCRSHS-----TEPIQIIDSFQDSVMSVCLTK--TE 158 (277)
Q Consensus 97 ~~~~------h~-~~v~~i~~--~~~-~~-~l~s~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~ 158 (277)
.+.. .. ..+..+++ ++. ++ +++....+|.+..|++.... .+.+..+.. ...+-.|..++ ..
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 4421 11 45556676 564 43 57778889999999985321 112222222 23344555553 45
Q ss_pred EEEeecCCcEEEEEcc-----CCccccc----CCCCCeeEEEE--eCCCC-EEEEEe-cCCeEEEEECC-CCceEEEEe
Q 023772 159 IIGGSVDGTVRTFDIR-----VGRELSD----DLGQPVNCISM--SNDGN-CILASC-LDSTLRLLDRS-TGELLQEYK 223 (277)
Q Consensus 159 ~~~g~~d~~i~i~d~~-----~~~~~~~----~~~~~v~~~~~--s~~~~-~l~~~~-~d~~i~~wd~~-~~~~~~~~~ 223 (277)
++.+-.+.-|..||.+ +.+.+.. .....+..|++ .++++ ||++++ .+.+..+||.+ +.+.+..|.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 8888888666666644 1222211 12246788887 45555 777776 56799999996 677777775
No 281
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.07 E-value=0.0014 Score=52.29 Aligned_cols=226 Identities=12% Similarity=0.069 Sum_probs=108.6
Q ss_pred EEEEEeC--CCcEEEEcCCCCeeEEEEeccCcc-EEEEEEcCCCCEEEEEeCC----CcEEEEECCCCce--eEEeeccc
Q 023772 32 YCLSCGK--DRTIRLWNPHRGIHIKTYKSHGRE-VRDVHVTADNSKLISCGGD----RQIFYWDVSTGRV--IRKFRGHE 102 (277)
Q Consensus 32 ~l~s~s~--d~~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~t~s~d----~~v~~wd~~~~~~--~~~~~~h~ 102 (277)
+++.||. ...+.+||+.+++....-...... -.++.. .++..++.|+.+ ..+.+||..+++- +..+....
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 3344443 367888998887644321111111 112222 355666777654 5688899887642 22222111
Q ss_pred CceeEEEEecCCCEEEEEeCC------CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeec---------CCc
Q 023772 103 SEVNAVKFNEYSSVVVSAGYD------QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSV---------DGT 167 (277)
Q Consensus 103 ~~v~~i~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------d~~ 167 (277)
..- ++. .-++++++.|+.+ ..+.+||+.+..-.....+.........+......++.|+. -..
T Consensus 93 ~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 170 (306)
T 3ii7_A 93 DSL-AAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNS 170 (306)
T ss_dssp BSC-EEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCC
T ss_pred cce-eEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccce
Confidence 111 122 2256677777765 45888887654211111111111111223334444555543 345
Q ss_pred EEEEEccCCc--ccccCC-CCCeeEEEEeCCCCEEEEEecC-----CeEEEEECCCCceEEEEeccccceeeeeeEecCC
Q 023772 168 VRTFDIRVGR--ELSDDL-GQPVNCISMSNDGNCILASCLD-----STLRLLDRSTGELLQEYKGHICKSFKTDCCLTNS 239 (277)
Q Consensus 168 i~i~d~~~~~--~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (277)
+.+||+.+.+ .+.... ...-.++... +++.++.|+.+ ..+.+||..+++-.. +...........++.. +
T Consensus 171 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~-~ 247 (306)
T 3ii7_A 171 CEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM-VSPMPWKGVTVKCAAV-G 247 (306)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEE-CCCCSCCBSCCEEEEE-T
T ss_pred EEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEE-CCCCCCCccceeEEEE-C
Confidence 7889987653 121111 1111122222 56667776643 358899998765432 2111111111112222 5
Q ss_pred CceEEeecCC-----CeEEEEECcCccce
Q 023772 240 DAHVTGGSED-----GYIYFWDLVDASVV 263 (277)
Q Consensus 240 ~~~l~sgs~d-----~~i~iwd~~~~~~~ 263 (277)
+.+++.|+.+ ..+.+||..+.+..
T Consensus 248 ~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 248 SIVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp TEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred CEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 6666666533 56899999886543
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.04 E-value=0.0031 Score=50.80 Aligned_cols=203 Identities=11% Similarity=0.024 Sum_probs=119.0
Q ss_pred CCcEEEEEEeCCCCEE-EEEeCCCcEEEEcCCC----CeeEEEEeccCccEEEEEEcCCCCEE-EEEeCCCcEEEEECCC
Q 023772 18 EGAVLAARFNGDGNYC-LSCGKDRTIRLWNPHR----GIHIKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDVST 91 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l-~s~s~d~~v~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~~ 91 (277)
......++|++.+..| ++-..++.|..+++.. ......+.........+++.+.+..| ++-...+.|.+.+++.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 3456789999865544 4556678999998765 22222233233456889998755555 5556778999999875
Q ss_pred CceeEEeecccCceeEEEEecCCCEEEEEeC-C-CcEEEEeCccCCCcceEeeccccCcEEEEEec--CCeE-EEeecCC
Q 023772 92 GRVIRKFRGHESEVNAVKFNEYSSVVVSAGY-D-QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEI-IGGSVDG 166 (277)
Q Consensus 92 ~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~g~~d~ 166 (277)
......+...-.....+++.|.+..++.+.. . +.|...++..... .............+.++ ...+ ++-+..+
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~--~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--EEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe--EEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 4433223323346688999986655544443 3 6788877653221 11111112234455555 3444 4445567
Q ss_pred cEEEEEccCCc--ccccC--CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 167 TVRTFDIRVGR--ELSDD--LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 167 ~i~i~d~~~~~--~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
.|..+|+.... .+... .......+++. ++..+++-...+.|..+|..+++.+..+.
T Consensus 187 ~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred eEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 89999986322 12111 12345678885 45566666677899999987776655554
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.01 E-value=0.0044 Score=51.67 Aligned_cols=231 Identities=8% Similarity=-0.019 Sum_probs=133.2
Q ss_pred EEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEE-eCCCcEEEEECCCC----ceeEEeecccCcee
Q 023772 32 YCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISC-GGDRQIFYWDVSTG----RVIRKFRGHESEVN 106 (277)
Q Consensus 32 ~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~-s~d~~v~~wd~~~~----~~~~~~~~h~~~v~ 106 (277)
+|+.+. ...|+..++........+ .....+..++|++.++.|+-+ ...+.|+.+++... .....+........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444433 478899988766544443 345678899999876666544 45688999998752 22222332344667
Q ss_pred EEEEecC-CCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEee--cCCcEEEEEccCCcc--c
Q 023772 107 AVKFNEY-SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGS--VDGTVRTFDIRVGRE--L 179 (277)
Q Consensus 107 ~i~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~--~d~~i~i~d~~~~~~--~ 179 (277)
.+++.+. +++..+-...+.|.+.++..... .............+.+++ ..++... ..+.|...++..... +
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~ 240 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 240 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSE--EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCce--EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE
Confidence 8999874 55556666678899988764321 222222222344555554 3333332 236787777754321 1
Q ss_pred ccCCCCCeeEEEEeCCCCEEEEE-ecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECc
Q 023772 180 SDDLGQPVNCISMSNDGNCILAS-CLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLV 258 (277)
Q Consensus 180 ~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~ 258 (277)
....-...+.|++++++..|..+ ...+.|+.+|+.....................++ ..+.+..+-...+.|..+|..
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESS
T ss_pred EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcC
Confidence 11122467899999876665554 5567899999864433222222111112222333 234455566677889999988
Q ss_pred Cccceeeec
Q 023772 259 DASVVAKFK 267 (277)
Q Consensus 259 ~~~~~~~~~ 267 (277)
+|+.+..+.
T Consensus 320 ~G~~~~~i~ 328 (400)
T 3p5b_L 320 TGSDVNLLA 328 (400)
T ss_dssp SCCCCEEEE
T ss_pred CCCceEEEe
Confidence 887776665
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.00 E-value=0.0047 Score=51.52 Aligned_cols=204 Identities=11% Similarity=0.015 Sum_probs=119.9
Q ss_pred cCCcEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCC----eeEEEEeccCccEEEEEEcCCCCEE-EEEeCCCcEEEEECC
Q 023772 17 HEGAVLAARFNGDGNYCL-SCGKDRTIRLWNPHRG----IHIKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDVS 90 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~ 90 (277)
....+..++|++.+..|+ +-...+.|+.+++... .....+.........+++.+.+..| ++-...+.|.+.+++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 345677899998655544 5456678888887642 2233333344567889999855544 555667899999987
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEe-C-CCcEEEEeCccCCCcceEeeccccCcEEEEEec--CCeEE-EeecC
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAG-Y-DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEII-GGSVD 165 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~g~~d 165 (277)
.......+...-....++++.|.+..|+-+. . .+.|...++..... .............+.++ ...|. +-...
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~--~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc--EEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 6554433333344568899998665555443 2 36788888754322 22222212233445554 34444 44556
Q ss_pred CcEEEEEccCCcc--cccC--CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 166 GTVRTFDIRVGRE--LSDD--LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 166 ~~i~i~d~~~~~~--~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
+.|..+|+..... +... .-.....+++. .+..+.+-...+.|..+|..+++.+..+.
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 7888888764321 2111 11245567774 44556666677889999977776655554
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=0.0062 Score=51.33 Aligned_cols=150 Identities=10% Similarity=0.015 Sum_probs=87.4
Q ss_pred cEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCEEEEEeC-CC----cEEEEeCccCC
Q 023772 62 EVRDVHVTA-DNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY-DQ----SLRAWDCRSHS 135 (277)
Q Consensus 62 ~v~~~~~~~-~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~-d~----~i~iwd~~~~~ 135 (277)
....++++| ++..|+.+...+.|+.+|++++.+.. +.........++++++++.|+.+.. ++ .+...+.. ..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 457889998 45666666555889999998766443 3334456788999999995555443 22 23334432 22
Q ss_pred CcceEeeccccCcEEEEEecC---CeEEEeecCCcEEEEEccCCcc--ccc-CCCCCeeEEEEeCCCCE-EEEEecCCeE
Q 023772 136 TEPIQIIDSFQDSVMSVCLTK---TEIIGGSVDGTVRTFDIRVGRE--LSD-DLGQPVNCISMSNDGNC-ILASCLDSTL 208 (277)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~d~~i~i~d~~~~~~--~~~-~~~~~v~~~~~s~~~~~-l~~~~~d~~i 208 (277)
......+... .....+.+++ ..+++-..++.|..||...+.. +.. ......+.++|+|+|++ +++-...+.|
T Consensus 216 ~~~~~~l~~~-~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELTKG-QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEEEC-SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeeccC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 2211111111 1112233333 2244444567888898875542 111 11234678999999995 4555567889
Q ss_pred EEEECC
Q 023772 209 RLLDRS 214 (277)
Q Consensus 209 ~~wd~~ 214 (277)
+.++..
T Consensus 295 ~~~~~d 300 (430)
T 3tc9_A 295 LRSDYD 300 (430)
T ss_dssp EEEEEE
T ss_pred EEEeCC
Confidence 998764
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.89 E-value=0.0061 Score=49.12 Aligned_cols=223 Identities=7% Similarity=-0.050 Sum_probs=126.7
Q ss_pred CCcEEEEcCCCCe--eEEEEeccCccEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCcee-EEeecccCceeEEEEecC-
Q 023772 39 DRTIRLWNPHRGI--HIKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDVSTGRVI-RKFRGHESEVNAVKFNEY- 113 (277)
Q Consensus 39 d~~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~~~~~~-~~~~~h~~~v~~i~~~~~- 113 (277)
...|+..++.... ....+. .......++|.+.++.| .+-...+.|..++++.+... ..+...-....++++.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 4678888877652 222222 22356789999865555 45556788999998766422 122222235567888864
Q ss_pred CCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEee--cCCcEEEEEccCCc--ccccCCCCCe
Q 023772 114 SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGS--VDGTVRTFDIRVGR--ELSDDLGQPV 187 (277)
Q Consensus 114 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~--~d~~i~i~d~~~~~--~~~~~~~~~v 187 (277)
+++..+-...+.|.++++..... .............+.+++ ..++... ..+.|..+++.... .+....-...
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~--~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~P 168 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLR--KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWP 168 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC--EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE
T ss_pred CeEEEEECCCCEEEEEECCCCcE--EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCc
Confidence 45556656678899998764322 222222222334455443 3343333 24677777765322 1111122456
Q ss_pred eEEEEeCCCCEE-EEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeee
Q 023772 188 NCISMSNDGNCI-LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKF 266 (277)
Q Consensus 188 ~~~~~s~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~ 266 (277)
+.++++|++..| ++=+..+.|+.+|+..........+... .....++. .+.+..+-...+.|..+|..+|+....+
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~--~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLP--HPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCS--CEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCC--CceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 899999866555 4445677899999864332222221211 12223333 3445556667889999999888776665
Q ss_pred c
Q 023772 267 K 267 (277)
Q Consensus 267 ~ 267 (277)
.
T Consensus 246 ~ 246 (318)
T 3sov_A 246 H 246 (318)
T ss_dssp E
T ss_pred e
Confidence 4
No 287
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.87 E-value=0.0042 Score=49.67 Aligned_cols=229 Identities=9% Similarity=0.004 Sum_probs=109.9
Q ss_pred CCCEEEEEeCC----CcEEEEcCCCCeeEEEEeccCcc-EEEEEEcCCCCEEEEEeC----C-----CcEEEEECCCCce
Q 023772 29 DGNYCLSCGKD----RTIRLWNPHRGIHIKTYKSHGRE-VRDVHVTADNSKLISCGG----D-----RQIFYWDVSTGRV 94 (277)
Q Consensus 29 ~~~~l~s~s~d----~~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~t~s~----d-----~~v~~wd~~~~~~ 94 (277)
++.+++.||.+ ..+.+||+.+++....-...... -.++.. .++..++.|+. + ..+.+||+.+.+-
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 45566666632 46888998877544321111111 112222 25566666665 2 4688899876542
Q ss_pred --eEEeecccCceeEEEEecCCCEEEEEeCC-----CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecC--
Q 023772 95 --IRKFRGHESEVNAVKFNEYSSVVVSAGYD-----QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD-- 165 (277)
Q Consensus 95 --~~~~~~h~~~v~~i~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-- 165 (277)
+..+......-. +.. -++++++.|+.+ ..+.+||+.+..-.....+.........+......++.|+.+
T Consensus 103 ~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 180 (308)
T 1zgk_A 103 SPCAPMSVPRNRIG-VGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGT 180 (308)
T ss_dssp EECCCCSSCCBTCE-EEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred eECCCCCcCccccE-EEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCC
Confidence 211211111111 222 256677776644 357888876532111111111111112233344445566654
Q ss_pred ---CcEEEEEccCCc--ccccC-CCCCeeEEEEeCCCCEEEEEecC-----CeEEEEECCCCceEEEEeccccceeeeee
Q 023772 166 ---GTVRTFDIRVGR--ELSDD-LGQPVNCISMSNDGNCILASCLD-----STLRLLDRSTGELLQEYKGHICKSFKTDC 234 (277)
Q Consensus 166 ---~~i~i~d~~~~~--~~~~~-~~~~v~~~~~s~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
..+.+||+.+.+ .+... ....-.+++.. ++..++.|+.+ ..+.+||+.+.+... +...........+
T Consensus 181 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~ 258 (308)
T 1zgk_A 181 NRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTF-VAPMKHRRSALGI 258 (308)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEE-CCCCSSCCBSCEE
T ss_pred CcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEE-CCCCCCCccceEE
Confidence 458889987653 11111 11111122222 56677777654 468999998775432 2111111111112
Q ss_pred EecCCCceEEeecC-----CCeEEEEECcCccce
Q 023772 235 CLTNSDAHVTGGSE-----DGYIYFWDLVDASVV 263 (277)
Q Consensus 235 ~~~~~~~~l~sgs~-----d~~i~iwd~~~~~~~ 263 (277)
+. -++++++.|+. -..+.+||..+.+..
T Consensus 259 ~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 259 TV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp EE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred EE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 22 24556555543 246889999886553
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.84 E-value=0.0003 Score=63.15 Aligned_cols=226 Identities=8% Similarity=-0.028 Sum_probs=121.2
Q ss_pred CCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEE-eCCCcEEEEECCC----CceeEEeecccCceeEEEEec
Q 023772 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISC-GGDRQIFYWDVST----GRVIRKFRGHESEVNAVKFNE 112 (277)
Q Consensus 38 ~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~-s~d~~v~~wd~~~----~~~~~~~~~h~~~v~~i~~~~ 112 (277)
..+.|+..++.+......+.. ...+..++|.+.++.|+.+ ...+.|+.+++.. ......+.........+++.+
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred CccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 346788888776554333332 3456789999877776655 4567899999875 222222211122345677775
Q ss_pred C-CCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEee-c-CCcEEEEEccCCcc--cccCCCC
Q 023772 113 Y-SSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGS-V-DGTVRTFDIRVGRE--LSDDLGQ 185 (277)
Q Consensus 113 ~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~-~-d~~i~i~d~~~~~~--~~~~~~~ 185 (277)
. ++++++-...+.|.+.++..... ..++.........+.+++ ..|+... . .+.|..+++..... +......
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~--~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~ 540 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKR--KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 540 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCE--EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS
T ss_pred eCCcEEEEeccCCeEEEEecCCCce--EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC
Confidence 4 45555555678899988764321 111111111122333433 2333322 2 25677766643211 1111123
Q ss_pred CeeEEEEeCCC-CEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCcccee
Q 023772 186 PVNCISMSNDG-NCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVA 264 (277)
Q Consensus 186 ~v~~~~~s~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~ 264 (277)
..+.|+|+|++ .++++-+..+.|..+|+........+...........+++.. +.++.+....+.|..+|..+++.+.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~-~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET-TEEEEECSTTTCEEEEETTTEEEEE
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC-CEEEEEeCCCCeEEEEEccCCCceE
Confidence 46789999875 455555667789999986433222222111111122223333 3445556677889999998888777
Q ss_pred eec
Q 023772 265 KFK 267 (277)
Q Consensus 265 ~~~ 267 (277)
.+.
T Consensus 620 ~i~ 622 (699)
T 1n7d_A 620 LLA 622 (699)
T ss_dssp CCC
T ss_pred Eee
Confidence 765
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.80 E-value=0.02 Score=52.10 Aligned_cols=226 Identities=8% Similarity=-0.030 Sum_probs=127.9
Q ss_pred CCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCC----ceeEEeecccCceeEEEEec
Q 023772 38 KDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVSTG----RVIRKFRGHESEVNAVKFNE 112 (277)
Q Consensus 38 ~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~----~~~~~~~~h~~~v~~i~~~~ 112 (277)
....|+..++.......... ....+..++|.+...+|+ +-...+.|+.+++... .....+........+|++.+
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 34678888877655443333 446778999998665554 5556688999988753 22222332344567899987
Q ss_pred CCC-EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEee-c-CCcEEEEEccCCcc--cccCCCC
Q 023772 113 YSS-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGS-V-DGTVRTFDIRVGRE--LSDDLGQ 185 (277)
Q Consensus 113 ~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~-~-d~~i~i~d~~~~~~--~~~~~~~ 185 (277)
.+. +.++-...+.|.+.++..... ..+..........+.+++ ..|+... . .+.|...++..... +....-.
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~--~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~ 558 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 558 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSE--EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeE--EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCC
Confidence 764 555556678899998864321 222222223345555554 3343332 2 26677777754322 1111224
Q ss_pred CeeEEEEeCCCCEEEEE-ecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCcccee
Q 023772 186 PVNCISMSNDGNCILAS-CLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVA 264 (277)
Q Consensus 186 ~v~~~~~s~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~ 264 (277)
..+.|++++.+..|..+ ...+.|..+++....................+++. .+.+..+-...+.|...|..+|+.+.
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~tG~~~~ 637 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVN 637 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCCCcceE
Confidence 67899999766655544 45678999998644433333321111122223332 23444555677888888887776666
Q ss_pred eec
Q 023772 265 KFK 267 (277)
Q Consensus 265 ~~~ 267 (277)
.+.
T Consensus 638 ~l~ 640 (791)
T 3m0c_C 638 LLA 640 (791)
T ss_dssp EEE
T ss_pred Eee
Confidence 554
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.78 E-value=0.021 Score=51.86 Aligned_cols=203 Identities=11% Similarity=0.014 Sum_probs=115.8
Q ss_pred cCCcEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCC----eeEEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECC
Q 023772 17 HEGAVLAARFNGDGN-YCLSCGKDRTIRLWNPHRG----IHIKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVS 90 (277)
Q Consensus 17 H~~~V~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~ 90 (277)
....+..++|++... +.++-...+.|+.+++... .....+.........+++.+.++.|+ +-...+.|.+.+++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 345567899998544 4445566678888887642 22333433445678899998776554 55667899999987
Q ss_pred CCceeEEeecccCceeEEEEecCCCEEEEEe-CC-CcEEEEeCccCCCcceEeeccccCcEEEEEec--CCeEE-EeecC
Q 023772 91 TGRVIRKFRGHESEVNAVKFNEYSSVVVSAG-YD-QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEII-GGSVD 165 (277)
Q Consensus 91 ~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~-~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~g~~d 165 (277)
.......+...-....+|++.|....|+-+. .+ +.|...++.... ...+..........+.++ ...|+ +-...
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~--~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~ 579 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSLVTENIQWPNGITLDLLSGRLYWVDSKL 579 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--EEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc--eEEEEeCCCCCceEEEEecCCCeEEEEeCCC
Confidence 5544333333445678999998755555444 33 678887775432 222222222234445544 34444 43445
Q ss_pred CcEEEEEccCCcc--cccC--CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEE
Q 023772 166 GTVRTFDIRVGRE--LSDD--LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEY 222 (277)
Q Consensus 166 ~~i~i~d~~~~~~--~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 222 (277)
+.|..+++..... +... .-.....|++.. +..+++-...+.|...|..+++.+..+
T Consensus 580 ~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 580 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 6788888754322 1111 112345666643 344555566778888887777554444
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.72 E-value=0.017 Score=49.30 Aligned_cols=242 Identities=8% Similarity=0.050 Sum_probs=131.3
Q ss_pred cEEEEEEeCC-CCEEE-EEeCCCcEEEEcCCCCeeEEEEecc---CccEEEEEE-------cCCCCEEEEEeCCC-----
Q 023772 20 AVLAARFNGD-GNYCL-SCGKDRTIRLWNPHRGIHIKTYKSH---GREVRDVHV-------TADNSKLISCGGDR----- 82 (277)
Q Consensus 20 ~V~~~~~~~~-~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~h---~~~v~~~~~-------~~~~~~l~t~s~d~----- 82 (277)
....++|+|. ...|+ +-...+.|++.|..++......... ......++| ++++++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568999983 44444 4444477888998887655444322 225899999 99998666665443
Q ss_pred --cEEEEECCC-Ccee-----EEeecccCceeEEEEecC-CCEEEEEeCCCcEEEEeCc-------cCCC------cc--
Q 023772 83 --QIFYWDVST-GRVI-----RKFRGHESEVNAVKFNEY-SSVVVSAGYDQSLRAWDCR-------SHST------EP-- 138 (277)
Q Consensus 83 --~v~~wd~~~-~~~~-----~~~~~h~~~v~~i~~~~~-~~~l~s~~~d~~i~iwd~~-------~~~~------~~-- 138 (277)
.|.+.+... +... ..+.... ....++++|+ +.++++-..++.|..+|+. .... ..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266776443 2221 1222112 3356788884 5666677788889999986 3322 00
Q ss_pred -e-Eeecc-ccCcEEEEEec--CCe-EEEeecCCcEEEEEcc--CCc-----ccccC---CC-----------CCee-EE
Q 023772 139 -I-QIIDS-FQDSVMSVCLT--KTE-IIGGSVDGTVRTFDIR--VGR-----ELSDD---LG-----------QPVN-CI 190 (277)
Q Consensus 139 -~-~~~~~-~~~~~~~~~~~--~~~-~~~g~~d~~i~i~d~~--~~~-----~~~~~---~~-----------~~v~-~~ 190 (277)
. ..+.. .......++++ ++. +++-.....|+.++.. .+. .+... .+ .... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 0 11111 11122344444 443 4444566778886543 221 01000 00 1234 55
Q ss_pred EEe-------CCCCEEEEEecCCeEEEEECCCCceEEEEecccc----------------------ceeeeeeEecCC-C
Q 023772 191 SMS-------NDGNCILASCLDSTLRLLDRSTGELLQEYKGHIC----------------------KSFKTDCCLTNS-D 240 (277)
Q Consensus 191 ~~s-------~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~-~ 240 (277)
+.. ++|.++++=.....||.++. ++. +.++.+... .......++.++ +
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 665 56777777777889999994 563 455544210 112233455554 5
Q ss_pred ceEEeecCCCeEEEEECcCcccee
Q 023772 241 AHVTGGSEDGYIYFWDLVDASVVA 264 (277)
Q Consensus 241 ~~l~sgs~d~~i~iwd~~~~~~~~ 264 (277)
.+.++=+....||.++++....++
T Consensus 457 ~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EEEEEETTTTEEEEEEECCCC---
T ss_pred EEEEEeCCCCEEEEEECCCCcccc
Confidence 555555566677777776554443
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.70 E-value=0.014 Score=49.19 Aligned_cols=115 Identities=12% Similarity=0.126 Sum_probs=68.9
Q ss_pred cCCcEEEEEEeCCCCEEEEEeCC---Cc-EEEEcCCCCee-EEEEeccCccEEEEEEcC-CCCEEEEEeCCCcEEEEECC
Q 023772 17 HEGAVLAARFNGDGNYCLSCGKD---RT-IRLWNPHRGIH-IKTYKSHGREVRDVHVTA-DNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 17 H~~~V~~~~~~~~~~~l~s~s~d---~~-v~iwd~~~~~~-~~~~~~h~~~v~~~~~~~-~~~~l~t~s~d~~v~~wd~~ 90 (277)
.......++|+++|+++++.... .. +...+...+.. ...+. .......+++.+ ++..+++-..++.|..+|..
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 34457899999999955554321 12 22233221111 11222 234567789999 56655666677899999998
Q ss_pred CCceeEEeec-c-cCceeEEEEecCCC-EEEEEeCCCcEEEEeCc
Q 023772 91 TGRVIRKFRG-H-ESEVNAVKFNEYSS-VVVSAGYDQSLRAWDCR 132 (277)
Q Consensus 91 ~~~~~~~~~~-h-~~~v~~i~~~~~~~-~l~s~~~d~~i~iwd~~ 132 (277)
++.....+.. . ...-..++++|+++ +.++-...+.|..++..
T Consensus 259 ~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 259 TGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp TCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 7766333321 1 12224699999998 55555667889997764
No 293
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.66 E-value=0.014 Score=46.62 Aligned_cols=226 Identities=10% Similarity=0.059 Sum_probs=108.9
Q ss_pred EEEEeCCCcEEEEcCCCCeeEEE-EeccCccEEEEEEcCCCCEEEEEeC-----C------CcEEEEECCCCce--eEEe
Q 023772 33 CLSCGKDRTIRLWNPHRGIHIKT-YKSHGREVRDVHVTADNSKLISCGG-----D------RQIFYWDVSTGRV--IRKF 98 (277)
Q Consensus 33 l~s~s~d~~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~t~s~-----d------~~v~~wd~~~~~~--~~~~ 98 (277)
++.|+ ..+.+||+.+++-... ...............++..++.|+. . ..+..||..+++- +..+
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34455 5788999988875431 1111122233334457777777773 1 1277888876542 1111
Q ss_pred ecccCceeEEEEecCCCEEEEEeCC--------CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeec-C----
Q 023772 99 RGHESEVNAVKFNEYSSVVVSAGYD--------QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSV-D---- 165 (277)
Q Consensus 99 ~~h~~~v~~i~~~~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-d---- 165 (277)
...... .++.. -++++++.|+.+ ..+.+||+.+..-.....+.........+......++.|+. +
T Consensus 86 p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 86 PSPRCL-FGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKC 163 (315)
T ss_dssp SSCEES-CEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCB
T ss_pred Ccchhc-eeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcc
Confidence 111111 11222 245666777643 45888887653211111111111112233344445566665 2
Q ss_pred -CcEEEEEccCCc--ccccCC-CCCeeEEEEeCCCCEEEEEecCC-----eEEEEECCCCceEEEEeccccceeeeeeEe
Q 023772 166 -GTVRTFDIRVGR--ELSDDL-GQPVNCISMSNDGNCILASCLDS-----TLRLLDRSTGELLQEYKGHICKSFKTDCCL 236 (277)
Q Consensus 166 -~~i~i~d~~~~~--~~~~~~-~~~v~~~~~s~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 236 (277)
..+.+||+.+.+ .+.... ...-.+++. -+++.++.|+.++ .+.+||..+++-.. +...........++.
T Consensus 164 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~ 241 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP-FEAFPQERSSLSLVS 241 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEE-ECCCSSCCBSCEEEE
T ss_pred cceEEEEeCCCCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEE-CCCCCCcccceeEEE
Confidence 468889987653 111111 111112222 2567777777654 47889998775433 221111111111222
Q ss_pred cCCCceEEeecCC--------------CeEEEEECcCccceee
Q 023772 237 TNSDAHVTGGSED--------------GYIYFWDLVDASVVAK 265 (277)
Q Consensus 237 ~~~~~~l~sgs~d--------------~~i~iwd~~~~~~~~~ 265 (277)
-++++++.|+.+ ..+.+||+.+.+-...
T Consensus 242 -~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 242 -LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -ECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 245555555442 2478899988765443
No 294
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.57 E-value=0.02 Score=45.94 Aligned_cols=232 Identities=11% Similarity=0.156 Sum_probs=145.3
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeEEeecc
Q 023772 23 AARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST-GRVIRKFRGH 101 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~-~~~~~~~~~h 101 (277)
+.-.+|..+.||--. ..++.|+|+++...++.+.-. .+|.--.|..+.. |+-.. +..|.-|+++. ..+.+-|..|
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 345578777777544 689999999999888888764 5788888876543 33332 46899999975 4566666555
Q ss_pred ----cCceeEEEEecCCCEEEEEe-------CCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC----eEEE----e
Q 023772 102 ----ESEVNAVKFNEYSSVVVSAG-------YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT----EIIG----G 162 (277)
Q Consensus 102 ----~~~v~~i~~~~~~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----g 162 (277)
...|..-..+++.+.++-.+ -.|.+.+|.... ...+.+++|......+.+.++ .+++ +
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~ 223 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG 223 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT---TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEE
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc---cccceeeeeeeeeEEEecCCCCCCceEEEEEEec
Confidence 35666666778877655443 247788887653 345556666554444444322 2222 1
Q ss_pred ecCCcEEEEEccCC---c-ccc----------cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccc
Q 023772 163 SVDGTVRTFDIRVG---R-ELS----------DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228 (277)
Q Consensus 163 ~~d~~i~i~d~~~~---~-~~~----------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 228 (277)
...+++.+-++... . .+. ....+-.-++.+++.-..+..-..-|.|++||++++.++..-+-....
T Consensus 224 ~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 224 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp TTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred CCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCc
Confidence 11258888887443 1 110 011233556778887777888889999999999999998654433222
Q ss_pred eeeeeeEecCCCceEEeecCCCeEEEEECcCccce
Q 023772 229 SFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 229 ~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~ 263 (277)
.+.. +.....+..++. ...|+|.--.+++..++
T Consensus 304 iF~t-a~~~~~~Gi~~V-nr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 304 IFVT-APHEATAGIIGV-NRKGQVLSVCVEEENII 336 (365)
T ss_dssp EEEE-EEEGGGTEEEEE-ETTCEEEEEEECTTTHH
T ss_pred eEEe-cccCCCCcEEEE-cCCCEEEEEEECcccEe
Confidence 2222 222233444444 48888888777776655
No 295
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.57 E-value=0.0089 Score=47.44 Aligned_cols=186 Identities=12% Similarity=0.146 Sum_probs=92.2
Q ss_pred CCCEEEEEeCC-----CcEEEEcCCCCe---eEEEEeccCcc-EEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc-
Q 023772 29 DGNYCLSCGKD-----RTIRLWNPHRGI---HIKTYKSHGRE-VRDVHVTADNSKLISCGGD-----RQIFYWDVSTGR- 93 (277)
Q Consensus 29 ~~~~l~s~s~d-----~~v~iwd~~~~~---~~~~~~~h~~~-v~~~~~~~~~~~l~t~s~d-----~~v~~wd~~~~~- 93 (277)
++.+++.||.+ ..+.+||+.+.+ ....-...... -.++.. .+++.++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 45666777755 468889987765 33321111111 112222 256666666644 358889987654
Q ss_pred -eeEEeecccCceeEEEEecCCCEEEEEeCC-----CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecC--
Q 023772 94 -VIRKFRGHESEVNAVKFNEYSSVVVSAGYD-----QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD-- 165 (277)
Q Consensus 94 -~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-- 165 (277)
.+..+...... .++.. .++++++.|+.+ ..+..||+.+..-..+..+.........+......++.|+.+
T Consensus 141 ~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 141 SMLGDMQTAREG-AGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGT 218 (301)
T ss_dssp EEEEECSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred EECCCCCCCccc-ceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCC
Confidence 22222211111 11222 256677777654 458888876532111111111111122333344445666654
Q ss_pred ---CcEEEEEccCCc--ccccCC-CCCeeEEEEeCCCCEEEEEecC-----CeEEEEECCCCce
Q 023772 166 ---GTVRTFDIRVGR--ELSDDL-GQPVNCISMSNDGNCILASCLD-----STLRLLDRSTGEL 218 (277)
Q Consensus 166 ---~~i~i~d~~~~~--~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----~~i~~wd~~~~~~ 218 (277)
..+.+||+.+.+ .+.... ...-.+++. -+++.++.|+.+ ..+.+||..+.+.
T Consensus 219 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 219 AHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV-LRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred cccceEEEEeCCCCcEEECCCCCCcccceeEEE-ECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 468889987653 121111 111112222 256677777655 3577888877654
No 296
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.55 E-value=0.0081 Score=47.75 Aligned_cols=186 Identities=13% Similarity=0.141 Sum_probs=90.6
Q ss_pred CCCEEEEEeCC-----CcEEEEcCCCCeeEEEEeccCcc-EEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCce--e
Q 023772 29 DGNYCLSCGKD-----RTIRLWNPHRGIHIKTYKSHGRE-VRDVHVTADNSKLISCGGDR-----QIFYWDVSTGRV--I 95 (277)
Q Consensus 29 ~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~t~s~d~-----~v~~wd~~~~~~--~ 95 (277)
++.+++.||.+ ..+.+||+.+.+....-...... -.++.. .++..++.|+.++ .+.+||+.+.+- +
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 55666677655 35788888876543322111111 112222 2566667776553 577888876542 2
Q ss_pred EEeecccCceeEEEEecCCCEEEEEeCC-------CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecC---
Q 023772 96 RKFRGHESEVNAVKFNEYSSVVVSAGYD-------QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD--- 165 (277)
Q Consensus 96 ~~~~~h~~~v~~i~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d--- 165 (277)
..+...... .++.. -++++++.|+.+ ..+..||+.+..-..+..+.........+......++.|+.+
T Consensus 140 ~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 140 APMNTRRSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPL 217 (302)
T ss_dssp CCCSSCCBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSS
T ss_pred CCCCCcccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCc
Confidence 112111111 12222 245666766643 347888876532111111111111122333444456666654
Q ss_pred --CcEEEEEccCCc--ccccCCCCC-eeEEEEeCCCCEEEEEecCC-----eEEEEECCCCce
Q 023772 166 --GTVRTFDIRVGR--ELSDDLGQP-VNCISMSNDGNCILASCLDS-----TLRLLDRSTGEL 218 (277)
Q Consensus 166 --~~i~i~d~~~~~--~~~~~~~~~-v~~~~~s~~~~~l~~~~~d~-----~i~~wd~~~~~~ 218 (277)
..+.+||+.+.+ .+....... -.+++. .++..++.|+.++ .+.+||..+++-
T Consensus 218 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 218 VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 368889987653 111111111 112222 2566777777553 478888877653
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.54 E-value=0.015 Score=46.83 Aligned_cols=160 Identities=8% Similarity=0.023 Sum_probs=97.0
Q ss_pred EeccCccEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCceeEEeecc-----c--CceeEEEE---ecCCCEEEEEe---
Q 023772 56 YKSHGREVRDVHVTADNSKLISCG-GDRQIFYWDVSTGRVIRKFRGH-----E--SEVNAVKF---NEYSSVVVSAG--- 121 (277)
Q Consensus 56 ~~~h~~~v~~~~~~~~~~~l~t~s-~d~~v~~wd~~~~~~~~~~~~h-----~--~~v~~i~~---~~~~~~l~s~~--- 121 (277)
+........+..|.+...++..++ ..++|..||...+......... . ..+..+.+ .+++++++...
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 334444567889988777776666 7899999999766433322222 1 13578999 57877776543
Q ss_pred ----------CCCcEEEEeCc---cCCCcceEeeccc-----------cCcEEEEEecC--CeEEEeecC-CcEEEEEcc
Q 023772 122 ----------YDQSLRAWDCR---SHSTEPIQIIDSF-----------QDSVMSVCLTK--TEIIGGSVD-GTVRTFDIR 174 (277)
Q Consensus 122 ----------~d~~i~iwd~~---~~~~~~~~~~~~~-----------~~~~~~~~~~~--~~~~~g~~d-~~i~i~d~~ 174 (277)
.+..+..||+. +........+... ...+..+..++ +-.++++.. +.|...+..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 26779999987 4433322222111 12345555554 445666666 555555443
Q ss_pred CCcc--ccc-----CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCC
Q 023772 175 VGRE--LSD-----DLGQPVNCISMSNDGNCILASCLDSTLRLLDRST 215 (277)
Q Consensus 175 ~~~~--~~~-----~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~ 215 (277)
.... +.. ....-.+.|+++|+|..|++....+.|..+|+.+
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 2211 100 1112367899999999888887799999999874
No 298
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.52 E-value=0.01 Score=47.28 Aligned_cols=185 Identities=11% Similarity=0.102 Sum_probs=92.2
Q ss_pred CCCEEEEEeCC----CcEEEEcCCCCeeEEEEeccCccE-EEEEEcCCCCEEEEEeCC------CcEEEEECCCCce--e
Q 023772 29 DGNYCLSCGKD----RTIRLWNPHRGIHIKTYKSHGREV-RDVHVTADNSKLISCGGD------RQIFYWDVSTGRV--I 95 (277)
Q Consensus 29 ~~~~l~s~s~d----~~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~t~s~d------~~v~~wd~~~~~~--~ 95 (277)
++.+++.||.+ ..+.+||+.+++....-....... .++.. .+++.++.|+.+ ..+.+||..+.+- +
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 55666777755 677888988876543322111111 12222 256666777655 4688999887642 2
Q ss_pred EEeecccCceeEEEEecCCCEEEEEeC---------CCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecC-
Q 023772 96 RKFRGHESEVNAVKFNEYSSVVVSAGY---------DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD- 165 (277)
Q Consensus 96 ~~~~~h~~~v~~i~~~~~~~~l~s~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d- 165 (277)
..+...... .++.. -++++++.|+. -..+.+||+.+..-..+..+.........+......++.|+.+
T Consensus 134 ~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 211 (306)
T 3ii7_A 134 PSMLTQRCS-HGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNG 211 (306)
T ss_dssp CCCSSCCBS-CEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEET
T ss_pred CCCcCCcce-eEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCC
Confidence 111111111 11222 25566666654 3447888876542111111111111122233344445566543
Q ss_pred ----CcEEEEEccCCc--ccccCC-C-CCeeEEEEeCCCCEEEEEecC-----CeEEEEECCCCce
Q 023772 166 ----GTVRTFDIRVGR--ELSDDL-G-QPVNCISMSNDGNCILASCLD-----STLRLLDRSTGEL 218 (277)
Q Consensus 166 ----~~i~i~d~~~~~--~~~~~~-~-~~v~~~~~s~~~~~l~~~~~d-----~~i~~wd~~~~~~ 218 (277)
..+.+||+.+.+ .+.... . ....++.+ ++..++.|+.+ ..+.+||..+.+-
T Consensus 212 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 212 LGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp TEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred CCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 357889987653 111111 1 11122222 56677777754 4678899887654
No 299
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.51 E-value=0.02 Score=44.43 Aligned_cols=200 Identities=12% Similarity=0.104 Sum_probs=119.4
Q ss_pred EEeccCccEEEEEEcCCCCEEEE-EeCCCcEEEEECCCCceeEEeec-ccCceeEEEEecCCCEEEEEeCCCcEEEEeCc
Q 023772 55 TYKSHGREVRDVHVTADNSKLIS-CGGDRQIFYWDVSTGRVIRKFRG-HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCR 132 (277)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t-~s~d~~v~~wd~~~~~~~~~~~~-h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~ 132 (277)
.+.+-...+..+++.|+++.|++ ...++.|...|+. ++.++.+.- -......+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34445567999999998776665 5567889999988 887777642 22467788998888877776677888888875
Q ss_pred cCCC-cceEeec------cccCcEEEEEec--CCeEEEeecCCcEEEEEccC---Cc--ccc-------cCCCCCeeEEE
Q 023772 133 SHST-EPIQIID------SFQDSVMSVCLT--KTEIIGGSVDGTVRTFDIRV---GR--ELS-------DDLGQPVNCIS 191 (277)
Q Consensus 133 ~~~~-~~~~~~~------~~~~~~~~~~~~--~~~~~~g~~d~~i~i~d~~~---~~--~~~-------~~~~~~v~~~~ 191 (277)
.... ....... ......-.++++ .+.++++.......+|.+.. .. .+. ...-.....++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 4332 0111111 011122344444 44566666555555555531 10 111 01123568899
Q ss_pred EeCCC-CEEEEEecCCeEEEEECCCCceEEEEecccc-------ceeeeeeEecCCCceEEeecCCCeEEEEEC
Q 023772 192 MSNDG-NCILASCLDSTLRLLDRSTGELLQEYKGHIC-------KSFKTDCCLTNSDAHVTGGSEDGYIYFWDL 257 (277)
Q Consensus 192 ~s~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~ 257 (277)
++|.. .+++.+...+.+..+|.. ++.+..+.-... ....--.++.++|++.++ ++-+.++.+.-
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 99964 456666777889999976 566665543211 112334567777764444 66666655543
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.45 E-value=0.00063 Score=61.09 Aligned_cols=201 Identities=11% Similarity=0.001 Sum_probs=109.5
Q ss_pred cEEEEEEeCCCCEEEEE-eCCCcEEEEcCCC----CeeEEEEeccCccEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCc
Q 023772 20 AVLAARFNGDGNYCLSC-GKDRTIRLWNPHR----GIHIKTYKSHGREVRDVHVTADNSK-LISCGGDRQIFYWDVSTGR 93 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~-s~d~~v~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~d~~v~~wd~~~~~ 93 (277)
.+..++|++.+..|+-+ ...+.|+.+++.. ......+.........+++.+.+.. +++-...+.|.+.+++...
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 34578888866655543 4567888888764 1211122112234567888755444 4554567889999987654
Q ss_pred eeEEeecccCceeEEEEecCCCEEEEEe-CC-CcEEEEeCccCCCcceEeeccccCcEEEEEec--CCe-EEEeecCCcE
Q 023772 94 VIRKFRGHESEVNAVKFNEYSSVVVSAG-YD-QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTE-IIGGSVDGTV 168 (277)
Q Consensus 94 ~~~~~~~h~~~v~~i~~~~~~~~l~s~~-~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~g~~d~~i 168 (277)
....+.........+++.|.+..|+.+. .. +.|...++..... .. +..........+.++ ... +++-+..+.|
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~-l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YS-LVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CE-ESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eE-EEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 3333322234457788988654444333 22 6787777653221 11 111111112234444 333 4444556788
Q ss_pred EEEEccCCc--ccccC--CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 169 RTFDIRVGR--ELSDD--LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 169 ~i~d~~~~~--~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
..+|+.... .+... .......|++..+ ..+++....+.|..+|..+++.+..+.
T Consensus 565 ~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 565 SSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 888885322 12111 1123345666554 455566677899999988887776654
No 301
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.44 E-value=0.031 Score=44.96 Aligned_cols=202 Identities=10% Similarity=-0.038 Sum_probs=118.6
Q ss_pred CcEEEEEEeCCC-CEEEEEeCCCcEEEEcCCCCee-EEEEeccCccEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCcee
Q 023772 19 GAVLAARFNGDG-NYCLSCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDVSTGRVI 95 (277)
Q Consensus 19 ~~V~~~~~~~~~-~~l~s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~~~~~~ 95 (277)
.....++|++.+ .+..+-...+.|..+++..+.. ...+...-.....+++.+.+..| ++-...+.|.+++++.....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 345688899854 4445656678888888766532 12222233456789998755544 55566789999998754332
Q ss_pred EEeecccCceeEEEEecCCCEEEEEe--CCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeE-EEeecCCcEEE
Q 023772 96 RKFRGHESEVNAVKFNEYSSVVVSAG--YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEI-IGGSVDGTVRT 170 (277)
Q Consensus 96 ~~~~~h~~~v~~i~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~i 170 (277)
............+++.|.+..++-+. ..+.|...++.... ........-.....+.+++ ..+ ++-+..+.|..
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~--~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS--RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS--CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC--eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 22223344568899998755555444 25778887765322 1122221122234555543 334 44455678888
Q ss_pred EEccCCc--ccccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 171 FDIRVGR--ELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 171 ~d~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
+|+.... .+..........+++.. +..+.+-...+.|..+|..+++..+.+.
T Consensus 193 ~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 193 SNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 8886322 12221234566778763 4455666677889999987776555443
No 302
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.40 E-value=0.043 Score=45.78 Aligned_cols=231 Identities=10% Similarity=0.144 Sum_probs=146.8
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeEEeecc
Q 023772 23 AARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST-GRVIRKFRGH 101 (277)
Q Consensus 23 ~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~-~~~~~~~~~h 101 (277)
+.-.+|..+.|+--. ..++.|+|+++...++.+.-. .+|.--.|..+. .|+-. .+..|.-|+++. ..+.+-|..|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~-~l~lV-T~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN-TVALV-TDNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETT-EEEEE-CSSEEEEEESSSSCCCEEEEECC
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCC-eEEEE-cCCeeEEecccCCCCchhheecc
Confidence 355677777777544 689999999999888888754 467777776554 33333 256899999974 3566666555
Q ss_pred ----cCceeEEEEecCCCEEEEEe-------CCCcEEEEeCccCCCcceEeeccccCcEEEEEecCC----eEEE-ee--
Q 023772 102 ----ESEVNAVKFNEYSSVVVSAG-------YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT----EIIG-GS-- 163 (277)
Q Consensus 102 ----~~~v~~i~~~~~~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-g~-- 163 (277)
...|..-..+++.+.++-.| -.|.+.+|.... ...+.+++|......+.+.++ .+++ +.
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~ 222 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG 222 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT---CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECS
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc---cccchheeeeeeeEEEecCCCCCCceEEEEEEec
Confidence 35666667778888765433 357788888653 345666776655555554432 1222 11
Q ss_pred -cCCcEEEEEccCC---c-ccc----------cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccc
Q 023772 164 -VDGTVRTFDIRVG---R-ELS----------DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICK 228 (277)
Q Consensus 164 -~d~~i~i~d~~~~---~-~~~----------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 228 (277)
..+++.+-++... . .+. ....+-.-++.+++.-..+..-..-|.|++||+.++.++..-+-....
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~ 302 (494)
T 1bpo_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 302 (494)
T ss_dssp TTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred CCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCc
Confidence 1368888888543 1 110 011234567888888888888889999999999999998654433222
Q ss_pred eeeeeeEec-CCCceEEeecCCCeEEEEECcCccce
Q 023772 229 SFKTDCCLT-NSDAHVTGGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 229 ~~~~~~~~~-~~~~~l~sgs~d~~i~iwd~~~~~~~ 263 (277)
.+. .+.. +.+..++. ...|.|.--.+++..++
T Consensus 303 iF~--t~~~~~~~Gi~~V-nr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 303 IFV--TAPHEATAGIIGV-NRKGQVLSVCVEEENII 335 (494)
T ss_dssp EEE--EEEETTTTEEEEE-ETTCEEEEEEECTTTHH
T ss_pred eEE--ecccCCCCcEEEE-ccCceEEEEEEccccch
Confidence 222 2333 33444444 48888887777776654
No 303
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.23 E-value=0.15 Score=48.45 Aligned_cols=253 Identities=16% Similarity=0.117 Sum_probs=134.6
Q ss_pred CCcEEEEEEeCC------CCEEEEEeC-CCcEEEEcCCCCeeEEEEecc-CccEEEEEEcC--CCCEEEEEeCCCcEEEE
Q 023772 18 EGAVLAARFNGD------GNYCLSCGK-DRTIRLWNPHRGIHIKTYKSH-GREVRDVHVTA--DNSKLISCGGDRQIFYW 87 (277)
Q Consensus 18 ~~~V~~~~~~~~------~~~l~s~s~-d~~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~--~~~~l~t~s~d~~v~~w 87 (277)
.+.|.|+++.+. +++++.|.. |++++|+++.+.+.+....-. .....++.+.. ...+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999998763 468888886 999999999876555433221 12444554432 33578888899987655
Q ss_pred EC--CCCceeE---EeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcE-EEEEec----CC
Q 023772 88 DV--STGRVIR---KFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSV-MSVCLT----KT 157 (277)
Q Consensus 88 d~--~~~~~~~---~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~----~~ 157 (277)
.+ .+|++.. .+.+ ..++.-..+...+..-+-+..++...++.-+ + ......-....+ ....++ ++
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~---~l~~s~l~~~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-H---KLVFSNVNLKEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-S---SEEEEEBSSSCCCEEEEECCSSSTT
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-C---ceEEeccChHHhceEeccCcccCCC
Confidence 44 4554432 1222 4466544444444332223334444444322 1 111111111111 222332 34
Q ss_pred eEEEeecCCcEEEEEccCCcccc---cCCCCCeeEEEEeCCCCEEEEEecC-----------------------------
Q 023772 158 EIIGGSVDGTVRTFDIRVGRELS---DDLGQPVNCISMSNDGNCILASCLD----------------------------- 205 (277)
Q Consensus 158 ~~~~g~~d~~i~i~d~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~d----------------------------- 205 (277)
.++. ..++.++|..+...+.+. ...+..++.++++|+.+.++.+..+
T Consensus 708 g~v~-~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1158)
T 3ei3_A 708 SLAL-ANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSS 786 (1158)
T ss_dssp EEEE-ECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCC
T ss_pred cEEE-EcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccc
Confidence 4554 345668888775433221 1345677888888877655443211
Q ss_pred --------------------CeEEEEECCCCceEEEEeccccceeeee--eEecC-CCceEEeec----------CCCeE
Q 023772 206 --------------------STLRLLDRSTGELLQEYKGHICKSFKTD--CCLTN-SDAHVTGGS----------EDGYI 252 (277)
Q Consensus 206 --------------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~l~sgs----------~d~~i 252 (277)
..|++.|..+.+.+..+.-..+...... +.+.. ...+++.|. ..|.|
T Consensus 787 ~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri 866 (1158)
T 3ei3_A 787 KLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRI 866 (1158)
T ss_dssp CCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEE
T ss_pred ccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEE
Confidence 2477888877777766654332221111 12222 246777664 45889
Q ss_pred EEEECcCccceeeec-cCcceeEee
Q 023772 253 YFWDLVDASVVAKFK-AHSLVVKLL 276 (277)
Q Consensus 253 ~iwd~~~~~~~~~~~-~h~~~v~~~ 276 (277)
++|++.++++....+ ...++|..|
T Consensus 867 ~vf~v~~~kL~lv~~~~v~g~v~al 891 (1158)
T 3ei3_A 867 VVFQYSDGKLQTVAEKEVKGAVYSM 891 (1158)
T ss_dssp EEEEEETTEEEEEEEEEESSCEEEE
T ss_pred EEEEEECCEEEEEEEEEcCCcCEEE
Confidence 999997654433332 123455544
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.10 E-value=0.077 Score=42.66 Aligned_cols=192 Identities=7% Similarity=0.066 Sum_probs=111.4
Q ss_pred EEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCeeEEE-Eec----cC--ccEEEEEE---cCCCCEEEEEe----------
Q 023772 21 VLAARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKT-YKS----HG--REVRDVHV---TADNSKLISCG---------- 79 (277)
Q Consensus 21 V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~~~~~~-~~~----h~--~~v~~~~~---~~~~~~l~t~s---------- 79 (277)
-.+.+|++....+. +.-..++|..||...+..... +.. .. ..+..+.| .+++.+++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 35788987554544 544789999999876543333 221 11 13578999 68866666433
Q ss_pred ---CCCcEEEEECC---CCceeEEee--ccc-----------CceeEEEEecCCCEEEEEeCC-CcEEEEeCccCCCcce
Q 023772 80 ---GDRQIFYWDVS---TGRVIRKFR--GHE-----------SEVNAVKFNEYSSVVVSAGYD-QSLRAWDCRSHSTEPI 139 (277)
Q Consensus 80 ---~d~~v~~wd~~---~~~~~~~~~--~h~-----------~~v~~i~~~~~~~~l~s~~~d-~~i~iwd~~~~~~~~~ 139 (277)
.+..+..+|+. +++.+.... ... ...+.++..++|+..++++.- +.|...+.........
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 26779999999 787765443 111 247899999999999999888 8877777543211111
Q ss_pred Eeecccc------CcEEEEEecCCeEEEeecCCcEEEEEccCCcc--cccC------CCCCeeEE-EEeCCCCE-EEEEe
Q 023772 140 QIIDSFQ------DSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRE--LSDD------LGQPVNCI-SMSNDGNC-ILASC 203 (277)
Q Consensus 140 ~~~~~~~------~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~--~~~~------~~~~v~~~-~~s~~~~~-l~~~~ 203 (277)
. ..... -.=+.+.+++..|++....+.|..+|+..... +... .......| ..-.+|+. +++..
T Consensus 175 ~-~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 175 A-WESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp E-ECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE
T ss_pred e-ecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC
Confidence 1 11100 01123444455666665599999999874333 2111 11122332 33346766 44444
Q ss_pred cCCeEEEEEC
Q 023772 204 LDSTLRLLDR 213 (277)
Q Consensus 204 ~d~~i~~wd~ 213 (277)
..+.+.+.+.
T Consensus 254 ~~~~~~l~S~ 263 (334)
T 2p9w_A 254 APYAISFRSW 263 (334)
T ss_dssp TTEEEEEECS
T ss_pred CCCEEEEECC
Confidence 5555555554
No 305
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.07 E-value=0.08 Score=42.29 Aligned_cols=220 Identities=11% Similarity=0.058 Sum_probs=103.5
Q ss_pred cEEEEcCCCCeeEEEE-eccCccEEEEEEcCCCCEEEEEeC----CC-------cEEEEECCCCce--eEEeecccCcee
Q 023772 41 TIRLWNPHRGIHIKTY-KSHGREVRDVHVTADNSKLISCGG----DR-------QIFYWDVSTGRV--IRKFRGHESEVN 106 (277)
Q Consensus 41 ~v~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~----d~-------~v~~wd~~~~~~--~~~~~~h~~~v~ 106 (277)
.+..||+.+++....- ..............++..++.|+. ++ .+..||..+++- +..+...... .
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-F 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-C
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-c
Confidence 4789999887754421 111112223334456777777773 12 167788776542 1111111111 1
Q ss_pred EEEEecCCCEEEEEeCC-------CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeec------CCcEEEEEc
Q 023772 107 AVKFNEYSSVVVSAGYD-------QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSV------DGTVRTFDI 173 (277)
Q Consensus 107 ~i~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------d~~i~i~d~ 173 (277)
++... ++++++.|+.+ ..+.+||+.+..-.....+.........+......++.|+. -..+.+||+
T Consensus 104 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 104 GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 22222 56677777764 34777887653211111011000111222234444555553 235888998
Q ss_pred cCCc--ccccC-CCCCeeEEEEeCCCCEEEEEecC-----CeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEe
Q 023772 174 RVGR--ELSDD-LGQPVNCISMSNDGNCILASCLD-----STLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTG 245 (277)
Q Consensus 174 ~~~~--~~~~~-~~~~v~~~~~s~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 245 (277)
.+.+ .+... ....-.+++.. +++.++.|+.+ ..+.+||..+++... +...........++ ..++.+++.
T Consensus 183 ~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~-~~~~~i~v~ 259 (318)
T 2woz_A 183 KKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEV-MTEFPQERSSISLV-SLAGSLYAI 259 (318)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEE-CCCCSSCCBSCEEE-EETTEEEEE
T ss_pred CCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEE-CCCCCCcccceEEE-EECCEEEEE
Confidence 7653 11111 11111122222 56677777643 246789988765432 11111111111122 234555555
Q ss_pred ecCC--------------CeEEEEECcCccceee
Q 023772 246 GSED--------------GYIYFWDLVDASVVAK 265 (277)
Q Consensus 246 gs~d--------------~~i~iwd~~~~~~~~~ 265 (277)
|+.+ ..+.+||..+.+-...
T Consensus 260 GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 260 GGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 5432 4588999988766544
No 306
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.06 E-value=0.085 Score=42.47 Aligned_cols=189 Identities=8% Similarity=0.005 Sum_probs=100.1
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcE-EEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCce
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTI-RLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDV--STGRV 94 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v-~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~--~~~~~ 94 (277)
.+.+..+.+.+++..++.+. ++.| |-.|--. .-..........+..+.+.+++..++.+...+..+-+|- .+.+.
T Consensus 121 ~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~-tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMITN-VGAIYRTKDSGK-NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEP 198 (327)
T ss_dssp SSCEEEEEEEETTEEEEEET-TCCEEEESSTTS-SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEE
T ss_pred CCCeEEEEEECCCCEEEEeC-CccEEEEcCCCC-CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeE
Confidence 34567788777776666554 4543 4445211 122233345567889999998877765543333334442 22233
Q ss_pred eEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCC-CcceEee-ccccCcEEEEEecC-CeEEEeecCCcEEEE
Q 023772 95 IRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHS-TEPIQII-DSFQDSVMSVCLTK-TEIIGGSVDGTVRTF 171 (277)
Q Consensus 95 ~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~-~~~~~~~~~~~~~~-~~~~~g~~d~~i~i~ 171 (277)
+. ......+..+.+.+++.+++ ++.+|.+...+..... -.....- ......+..+.+.+ ..++.++.++.+. +
T Consensus 199 ~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~ 274 (327)
T 2xbg_A 199 HN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-C 274 (327)
T ss_dssp EE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEE-E
T ss_pred CC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEE-E
Confidence 31 23456778888888876654 4567877776311110 0000000 00112355555543 3455555677663 3
Q ss_pred EccCCccccc-----CCCCCeeEEEEeCCCCEEEEEecCCeEEEEEC
Q 023772 172 DIRVGRELSD-----DLGQPVNCISMSNDGNCILASCLDSTLRLLDR 213 (277)
Q Consensus 172 d~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~ 213 (277)
....++.... .....+..+.|.+++. +++++.+|.|.-++-
T Consensus 275 S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 275 SQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp ESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred eCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 2333332221 1234578888876554 667778887766654
No 307
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.01 E-value=0.034 Score=44.29 Aligned_cols=186 Identities=13% Similarity=0.158 Sum_probs=89.1
Q ss_pred CCCEEEEEeC----C-----CcEEEEcCCCCeeEEEEeccCcc-EEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc
Q 023772 29 DGNYCLSCGK----D-----RTIRLWNPHRGIHIKTYKSHGRE-VRDVHVTADNSKLISCGGD-----RQIFYWDVSTGR 93 (277)
Q Consensus 29 ~~~~l~s~s~----d-----~~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~t~s~d-----~~v~~wd~~~~~ 93 (277)
++.+++.||. + ..+.+||+.+.+....-...... -.++.. .+++.++.|+.+ ..+.+||..+.+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 4566666665 2 46788888876543321111111 112222 255666666543 458888987654
Q ss_pred e--eEEeecccCceeEEEEecCCCEEEEEeCC-----CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecC-
Q 023772 94 V--IRKFRGHESEVNAVKFNEYSSVVVSAGYD-----QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVD- 165 (277)
Q Consensus 94 ~--~~~~~~h~~~v~~i~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d- 165 (277)
- +..+......- ++... ++++++.|+.+ ..+..||+.+..-..+..+.........+......++.|+.+
T Consensus 149 W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 226 (308)
T 1zgk_A 149 WHLVAPMLTRRIGV-GVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDG 226 (308)
T ss_dssp EEECCCCSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EeECCCCCccccce-EEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCC
Confidence 2 11111111111 12222 56677777654 458888876532111111111111122233344446666654
Q ss_pred ----CcEEEEEccCCc--ccccC-CCCCeeEEEEeCCCCEEEEEecC-----CeEEEEECCCCce
Q 023772 166 ----GTVRTFDIRVGR--ELSDD-LGQPVNCISMSNDGNCILASCLD-----STLRLLDRSTGEL 218 (277)
Q Consensus 166 ----~~i~i~d~~~~~--~~~~~-~~~~v~~~~~s~~~~~l~~~~~d-----~~i~~wd~~~~~~ 218 (277)
..+.+||+.+.+ .+... ....-.+++.. +++.++.|+.+ ..+.+||..+.+.
T Consensus 227 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 227 QDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 468889987653 11111 11111122222 56677777644 3567788876644
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.00 E-value=0.17 Score=44.77 Aligned_cols=198 Identities=10% Similarity=-0.024 Sum_probs=109.0
Q ss_pred CCcEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCee-EEEEeccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCce
Q 023772 18 EGAVLAARFNGDGNYCL-SCGKDRTIRLWNPHRGIH-IKTYKSHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVSTGRV 94 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~~~ 94 (277)
-+....++|++.+..|+ +=...+.|..+++..... ...+.........+++.+.++.|+ +-...+.|.+.+++....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 34567899998665555 544567788888765422 233333335788999998666554 445678999999875443
Q ss_pred eEEeecccCceeEEEEecCCCEEEEEeC--CCcEEEEeCccCCCcceEeeccccCcEEEEEec--CCeE-EEeecCCcEE
Q 023772 95 IRKFRGHESEVNAVKFNEYSSVVVSAGY--DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT--KTEI-IGGSVDGTVR 169 (277)
Q Consensus 95 ~~~~~~h~~~v~~i~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~g~~d~~i~ 169 (277)
..-....-....+|++.|....|+-+.. .+.|...++.... ..............+.++ ...+ ++-...+.|.
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~--~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~ 196 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS--RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 196 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc--eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEE
Confidence 2222233445678999987555444443 3566666654322 122222122233445554 3343 3445556788
Q ss_pred EEEccCCcc--cccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCce
Q 023772 170 TFDIRVGRE--LSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218 (277)
Q Consensus 170 i~d~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~ 218 (277)
.+|+..... +..........+++..+ ..+.+-...+.|...|..+++.
T Consensus 197 ~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 197 KSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred EecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 888754321 11111123356677655 4455555677899999877653
No 309
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.96 E-value=0.1 Score=41.63 Aligned_cols=188 Identities=7% Similarity=0.033 Sum_probs=89.3
Q ss_pred CCCCEEEEEeC-----C------CcEEEEcCCCCeeEEEEeccCccE-EEEEEcCCCCEEEEEeCC--------CcEEEE
Q 023772 28 GDGNYCLSCGK-----D------RTIRLWNPHRGIHIKTYKSHGREV-RDVHVTADNSKLISCGGD--------RQIFYW 87 (277)
Q Consensus 28 ~~~~~l~s~s~-----d------~~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~t~s~d--------~~v~~w 87 (277)
.++.+++.||. . ..+.+||+.+++....-....... .++... ++..++.|+.+ ..+.+|
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEE
Confidence 46777777773 1 126778888765432211111111 122222 55566666632 458889
Q ss_pred ECCCCc--eeEEeecccCceeEEEEecCCCEEEEEeC-C-----CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeE
Q 023772 88 DVSTGR--VIRKFRGHESEVNAVKFNEYSSVVVSAGY-D-----QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEI 159 (277)
Q Consensus 88 d~~~~~--~~~~~~~h~~~v~~i~~~~~~~~l~s~~~-d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
|..+++ .+..+...... .++.. .++++++.|+. + ..+.+||+.+..-..+..+.........+......+
T Consensus 123 d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 200 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRII 200 (315)
T ss_dssp ETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE
T ss_pred CCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEE
Confidence 987753 22222111111 11222 34567777765 2 468888876532111111111111122333445556
Q ss_pred EEeecCC-----cEEEEEccCCc--ccccCC-CCCeeEEEEeCCCCEEEEEecCC--------------eEEEEECCCCc
Q 023772 160 IGGSVDG-----TVRTFDIRVGR--ELSDDL-GQPVNCISMSNDGNCILASCLDS--------------TLRLLDRSTGE 217 (277)
Q Consensus 160 ~~g~~d~-----~i~i~d~~~~~--~~~~~~-~~~v~~~~~s~~~~~l~~~~~d~--------------~i~~wd~~~~~ 217 (277)
+.|+.++ .+.+||+.+.+ .+.... ...-.+++. -+++.++.|+.++ .+.+||..+.+
T Consensus 201 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 201 VAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 6666554 47788887653 111111 111112222 2566677776532 36678887765
Q ss_pred eE
Q 023772 218 LL 219 (277)
Q Consensus 218 ~~ 219 (277)
-.
T Consensus 280 W~ 281 (315)
T 4asc_A 280 WE 281 (315)
T ss_dssp EE
T ss_pred hh
Confidence 43
No 310
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.0055 Score=49.67 Aligned_cols=189 Identities=12% Similarity=0.071 Sum_probs=101.0
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEeecc-cCceeEEEEe--c-CCCEEEEE-eCCCcEEEEeCccCCCcceEeeccc--
Q 023772 73 SKLISCGGDRQIFYWDVSTGRVIRKFRGH-ESEVNAVKFN--E-YSSVVVSA-GYDQSLRAWDCRSHSTEPIQIIDSF-- 145 (277)
Q Consensus 73 ~~l~t~s~d~~v~~wd~~~~~~~~~~~~h-~~~v~~i~~~--~-~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~-- 145 (277)
..++.++.||.|.-+|.++|+...++... ..++....-. + ++..++.. +.||.+..++..++...........
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888999999999999999999888754 1232221110 1 22333333 5799998888765421111111100
Q ss_pred cCcEEE---EEe-------cCCeEEEeecCCcEEEEEccCCcccccCC-CCC--------eeEEEEe-----CCCCEEEE
Q 023772 146 QDSVMS---VCL-------TKTEIIGGSVDGTVRTFDIRVGRELSDDL-GQP--------VNCISMS-----NDGNCILA 201 (277)
Q Consensus 146 ~~~~~~---~~~-------~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~--------v~~~~~s-----~~~~~l~~ 201 (277)
..++.. ... ....+++|+.++.+.-.|+++++.+.... +.+ ..|.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 011110 001 34457899999999999999988654321 111 0111110 12356777
Q ss_pred EecCCeEEEEECCCCceEEEE-----eccccce-eeeeeEecCCCceEEeecCCCeEEEEECcCcccee
Q 023772 202 SCLDSTLRLLDRSTGELLQEY-----KGHICKS-FKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVA 264 (277)
Q Consensus 202 ~~~d~~i~~wd~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~ 264 (277)
+..+..+.+.+ ++|+ +..+ ....... .......+.++.+ +.++.||.|+..|..+|+.+-
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77777777776 4454 2211 1110000 0000001234555 446889999999999888764
No 311
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.94 E-value=0.092 Score=42.63 Aligned_cols=93 Identities=8% Similarity=0.045 Sum_probs=44.5
Q ss_pred CCCEEEEEeC-CCcEEEEcCCC--CeeEEEEecc-Cc-cEEEEEEcCCCCEEEEEeC-C---------CcEEEEECCCCc
Q 023772 29 DGNYCLSCGK-DRTIRLWNPHR--GIHIKTYKSH-GR-EVRDVHVTADNSKLISCGG-D---------RQIFYWDVSTGR 93 (277)
Q Consensus 29 ~~~~l~s~s~-d~~v~iwd~~~--~~~~~~~~~h-~~-~v~~~~~~~~~~~l~t~s~-d---------~~v~~wd~~~~~ 93 (277)
++.+.+.||. ...+.+||+.+ .+....-... .. .-.+++. -+++.++.|+. + ..+.+||..+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 4556566654 35688888764 3322211111 11 1122222 25566666665 2 468889987754
Q ss_pred --eeEEeecccCceeEEEEecCCCEEEEEeCC
Q 023772 94 --VIRKFRGHESEVNAVKFNEYSSVVVSAGYD 123 (277)
Q Consensus 94 --~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d 123 (277)
.+.........-.++.. .++++++.|+.+
T Consensus 98 W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp EEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred EEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 22222201111112222 566778888765
No 312
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.78 E-value=0.14 Score=40.77 Aligned_cols=190 Identities=8% Similarity=0.086 Sum_probs=87.6
Q ss_pred eCCCCEEEEEeC----CC-------cEEEEcCCCCeeEEEEeccCc-cEEEEEEcCCCCEEEEEeCC-------CcEEEE
Q 023772 27 NGDGNYCLSCGK----DR-------TIRLWNPHRGIHIKTYKSHGR-EVRDVHVTADNSKLISCGGD-------RQIFYW 87 (277)
Q Consensus 27 ~~~~~~l~s~s~----d~-------~v~iwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~t~s~d-------~~v~~w 87 (277)
..++.+++.||. ++ .+.+||+.+.+....-..... .-.++... +++.++.|+.+ ..+.+|
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~y 132 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCY 132 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEE
Confidence 346677777773 12 167788877654332111111 11222222 55666667653 357788
Q ss_pred ECCCCce--eEEeecccCceeEEEEecCCCEEEEEeCC------CcEEEEeCccCCCcceEeeccccCcEEEEEecCCeE
Q 023772 88 DVSTGRV--IRKFRGHESEVNAVKFNEYSSVVVSAGYD------QSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEI 159 (277)
Q Consensus 88 d~~~~~~--~~~~~~h~~~v~~i~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
|..+.+= +..+...... .++.. .++++++.|+.+ ..+.+||+.+..-..+............+......+
T Consensus 133 d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 210 (318)
T 2woz_A 133 DPVAAKWSEVKNLPIKVYG-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIV 210 (318)
T ss_dssp ETTTTEEEEECCCSSCEES-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred eCCCCCEeECCCCCCcccc-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEE
Confidence 8876532 1111111111 11222 356676776642 358888886542111111111111112233444445
Q ss_pred EEeecC-----CcEEEEEccCCc--ccccCCCCC-eeEEEEeCCCCEEEEEecC--------------CeEEEEECCCCc
Q 023772 160 IGGSVD-----GTVRTFDIRVGR--ELSDDLGQP-VNCISMSNDGNCILASCLD--------------STLRLLDRSTGE 217 (277)
Q Consensus 160 ~~g~~d-----~~i~i~d~~~~~--~~~~~~~~~-v~~~~~s~~~~~l~~~~~d--------------~~i~~wd~~~~~ 217 (277)
+.|+.+ ..+.+||+.+.+ .+....... -.+++. .++..++.|+.+ ..+.+||..+.+
T Consensus 211 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 211 IAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 556543 246678887653 111111111 112222 256666776653 347778887765
Q ss_pred eEE
Q 023772 218 LLQ 220 (277)
Q Consensus 218 ~~~ 220 (277)
-..
T Consensus 290 W~~ 292 (318)
T 2woz_A 290 WAG 292 (318)
T ss_dssp EEE
T ss_pred ehh
Confidence 443
No 313
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.78 E-value=0.21 Score=42.65 Aligned_cols=150 Identities=13% Similarity=0.112 Sum_probs=85.5
Q ss_pred EEEEEEcCC-CCEEEEE-eCCCcEEEEECCCCceeEEeecc---cCceeEEEE-------ecCCCEEEEEeCCC------
Q 023772 63 VRDVHVTAD-NSKLISC-GGDRQIFYWDVSTGRVIRKFRGH---ESEVNAVKF-------NEYSSVVVSAGYDQ------ 124 (277)
Q Consensus 63 v~~~~~~~~-~~~l~t~-s~d~~v~~wd~~~~~~~~~~~~h---~~~v~~i~~-------~~~~~~l~s~~~d~------ 124 (277)
...++|+|. +..|+.+ ...+.|++.|++++.+....... ......++| +++++.++.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 568899983 5555544 44577999999887765433321 235788999 99998555555443
Q ss_pred -cEEEEeCcc-CCCcc-e--EeeccccCcEEEEEecC--Ce-EEEeecCCcEEEEEcc-------CCcc-----------
Q 023772 125 -SLRAWDCRS-HSTEP-I--QIIDSFQDSVMSVCLTK--TE-IIGGSVDGTVRTFDIR-------VGRE----------- 178 (277)
Q Consensus 125 -~i~iwd~~~-~~~~~-~--~~~~~~~~~~~~~~~~~--~~-~~~g~~d~~i~i~d~~-------~~~~----------- 178 (277)
.|.+++... ..... . ..+.... ....+..++ .. +++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255665332 11110 0 1111111 122333333 33 4455567789999987 3332
Q ss_pred ---cc-cCCCCCeeEEEEeCCCCE-EEEEecCCeEEEEEC
Q 023772 179 ---LS-DDLGQPVNCISMSNDGNC-ILASCLDSTLRLLDR 213 (277)
Q Consensus 179 ---~~-~~~~~~v~~~~~s~~~~~-l~~~~~d~~i~~wd~ 213 (277)
+. .........++|+|+|++ +++=.....|+.++.
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 11 111234578999999995 455556778988654
No 314
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.71 E-value=0.19 Score=41.04 Aligned_cols=196 Identities=11% Similarity=0.109 Sum_probs=108.1
Q ss_pred eeccCCcEEEEEEeCCCCEEEEEe------------CCCcEEEEcCCC--CeeE-EEEec-----cCccEEEEEEcC--C
Q 023772 14 LKGHEGAVLAARFNGDGNYCLSCG------------KDRTIRLWNPHR--GIHI-KTYKS-----HGREVRDVHVTA--D 71 (277)
Q Consensus 14 l~~H~~~V~~~~~~~~~~~l~s~s------------~d~~v~iwd~~~--~~~~-~~~~~-----h~~~v~~~~~~~--~ 71 (277)
+.+-......+...++|..+++++ .+|.|.++|+.+ ++.. ..+.+ .......+.+.+ +
T Consensus 45 i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 45 VKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp CTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred eCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 334233456777888886655652 789999999873 2221 12222 234577777765 3
Q ss_pred CC-EEEEEe-C--CCcEEEEECCCC----ceeEEeecc-cCceeEEEEecCCCEEEEEeC-----------------CCc
Q 023772 72 NS-KLISCG-G--DRQIFYWDVSTG----RVIRKFRGH-ESEVNAVKFNEYSSVVVSAGY-----------------DQS 125 (277)
Q Consensus 72 ~~-~l~t~s-~--d~~v~~wd~~~~----~~~~~~~~h-~~~v~~i~~~~~~~~l~s~~~-----------------d~~ 125 (277)
+. +|+.+. . +.++-+|+++.+ ..+.++.+. -...+++.+.+++.+.++... .|.
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~ 204 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSF 204 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEE
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccE
Confidence 43 454442 2 467788776543 223444433 245789999999987776541 244
Q ss_pred EEEEeCccCCCcceEeeccccCcEEEEEecCC--eEE-EeecCCcEEEEEccCCcccc----cCCCCCeeEEEEeC-CCC
Q 023772 126 LRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKT--EII-GGSVDGTVRTFDIRVGRELS----DDLGQPVNCISMSN-DGN 197 (277)
Q Consensus 126 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~g~~d~~i~i~d~~~~~~~~----~~~~~~v~~~~~s~-~~~ 197 (277)
+.-+|.. . .......-.....+.++++ .++ +-+..+.|..|++.....+. -......-.+++++ +|+
T Consensus 205 vyr~d~~--~---~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~ 279 (355)
T 3sre_A 205 VTYYSPN--D---VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGD 279 (355)
T ss_dssp EEEECTT--C---CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCC
T ss_pred EEEEECC--e---EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCc
Confidence 5555542 1 1122111223455666654 344 44567889999985321110 02234566788999 598
Q ss_pred EEEEEecC-CeEEEEECC
Q 023772 198 CILASCLD-STLRLLDRS 214 (277)
Q Consensus 198 ~l~~~~~d-~~i~~wd~~ 214 (277)
+.+++..+ +.|..||..
T Consensus 280 lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 280 LWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEEESCHHHHHSCCTT
T ss_pred EEEEecCCceEEEEECCC
Confidence 77766544 244444543
No 315
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.70 E-value=0.13 Score=49.34 Aligned_cols=231 Identities=10% Similarity=0.136 Sum_probs=132.3
Q ss_pred EEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeEEeecc-
Q 023772 24 ARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST-GRVIRKFRGH- 101 (277)
Q Consensus 24 ~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~-~~~~~~~~~h- 101 (277)
.-.+|..+.++--. ..++.|+|+.+...++.+.-. .+|.-..|...... +-.. +..|..|+++. ..+.+-|..|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l-~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTV-ALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCCCee-EEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 44567766666543 689999999987777766653 46777777655433 2222 46899999974 3444444444
Q ss_pred ---cCceeEEEEecCCCEEEEEe-------CCCcEEEEeCccCCCcceEeeccccCcEEEEEec----CCeEEEe----e
Q 023772 102 ---ESEVNAVKFNEYSSVVVSAG-------YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLT----KTEIIGG----S 163 (277)
Q Consensus 102 ---~~~v~~i~~~~~~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g----~ 163 (277)
...|..-..+++.+.++-.| -.|.+.+|..... ..+.+++|......+... +..+++- .
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~---~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~ 223 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc---cchhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence 45666667777777765433 3578888876532 223334443332222221 1112211 1
Q ss_pred cCCcEEEEEccCC----ccccc----------CCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccce
Q 023772 164 VDGTVRTFDIRVG----RELSD----------DLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKS 229 (277)
Q Consensus 164 ~d~~i~i~d~~~~----~~~~~----------~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 229 (277)
..+++.+-++... ..+.. ....-.-++..++.-..+..-..-|.|++||+.++.++..-+-.....
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~i 303 (1630)
T 1xi4_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI 303 (1630)
T ss_pred CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCce
Confidence 1267888887543 11110 012234456777777777778889999999999998875433222222
Q ss_pred eeeeeEecCCCceEEeecCCCeEEEEECcCccce
Q 023772 230 FKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 230 ~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~ 263 (277)
+.. +...+.+..++. ...|.|.--.+++..++
T Consensus 304 F~~-~~~~~~~g~~~v-nr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 304 FVT-APHEATAGIIGV-NRKGQVLSVCVEEENII 335 (1630)
T ss_pred EEe-ccCCCCCceEEE-cCCceEEEEEEccchhh
Confidence 222 222233444444 47777777776665554
No 316
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.68 E-value=0.3 Score=43.11 Aligned_cols=225 Identities=6% Similarity=-0.048 Sum_probs=116.4
Q ss_pred CCCcEEEEcCCCCe-eEEEEeccCccEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCce-eEEeecccCceeEEEEecCC
Q 023772 38 KDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTADNSKLISC-GGDRQIFYWDVSTGRV-IRKFRGHESEVNAVKFNEYS 114 (277)
Q Consensus 38 ~d~~v~iwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~t~-s~d~~v~~wd~~~~~~-~~~~~~h~~~v~~i~~~~~~ 114 (277)
....|+..++.... ........-.....++|++.++.|+-+ ...+.|..++++.... ...+...-.....+++.+.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 34678888876542 122222234567899999877766644 4567899999876532 22222223567889999855
Q ss_pred C-EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEeec--CCcEEEEEccCCc--ccccCCCCCe
Q 023772 115 S-VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGSV--DGTVRTFDIRVGR--ELSDDLGQPV 187 (277)
Q Consensus 115 ~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~--d~~i~i~d~~~~~--~~~~~~~~~v 187 (277)
. +..+-...+.|.+.++...... ............+.+++ ..+..... ...|...++.... .+........
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~--~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P 173 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRK--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWP 173 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSE
T ss_pred CEEEEEeCCCCEEEEEECCCCCEE--EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCC
Confidence 5 5555566788999988643221 12211112223334433 33333222 3455555554221 1111223457
Q ss_pred eEEEEeCCCCEE-EEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeee
Q 023772 188 NCISMSNDGNCI-LASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKF 266 (277)
Q Consensus 188 ~~~~~s~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~ 266 (277)
+.+++++++..| .+-...+.|..+|+..........+.. ......++..+ ....+-...+.|...|..+++....+
T Consensus 174 ~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~--~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 174 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSL--PHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred cEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCC--CCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEE
Confidence 899999875555 444556788888886433322222111 11122233333 44445566778988898888765554
Q ss_pred c
Q 023772 267 K 267 (277)
Q Consensus 267 ~ 267 (277)
.
T Consensus 251 ~ 251 (619)
T 3s94_A 251 H 251 (619)
T ss_dssp C
T ss_pred e
Confidence 4
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.62 E-value=0.17 Score=40.97 Aligned_cols=105 Identities=10% Similarity=0.107 Sum_probs=66.4
Q ss_pred CEEEEEeCCCcEEEEcCCCCeeEEEEecc-CccEEEEEE--cCCCCEEEEE--eCCCcEEEEECCCCceeEEeec----c
Q 023772 31 NYCLSCGKDRTIRLWNPHRGIHIKTYKSH-GREVRDVHV--TADNSKLISC--GGDRQIFYWDVSTGRVIRKFRG----H 101 (277)
Q Consensus 31 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~h-~~~v~~~~~--~~~~~~l~t~--s~d~~v~~wd~~~~~~~~~~~~----h 101 (277)
..++.++.||.|.-.|..+|+.+-+++.. ..++....- .+.+..++.+ ..||.+..++.++|.....+.- .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46788899999999999999988888754 122222110 0112234433 5899999999988865443331 1
Q ss_pred cCceeEEE----E-----ecCCCEEEEEeCCCcEEEEeCccCCC
Q 023772 102 ESEVNAVK----F-----NEYSSVVVSAGYDQSLRAWDCRSHST 136 (277)
Q Consensus 102 ~~~v~~i~----~-----~~~~~~l~s~~~d~~i~iwd~~~~~~ 136 (277)
.+++.. . + ...+..+++|+.+|.+...|+++++.
T Consensus 91 ~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 91 TSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp TCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred cccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 222221 0 0 01456788999999999999887654
No 318
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.48 E-value=0.42 Score=42.28 Aligned_cols=224 Identities=4% Similarity=-0.123 Sum_probs=128.8
Q ss_pred CCCcEEEEcCCCCeeEEEEe-ccCccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCC
Q 023772 38 KDRTIRLWNPHRGIHIKTYK-SHGREVRDVHVTADNSKLI-SCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115 (277)
Q Consensus 38 ~d~~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~-t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~ 115 (277)
....|+..++.+......+. ..-..+..++|++.++.|+ +-..++.|..++++.......+.........+++.+.+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 45678888887654333222 1234678999998777665 445678999999876544333332224567889987655
Q ss_pred -EEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeEEEee--cCCcEEEEEccCCcc-cccCCCCCeeE
Q 023772 116 -VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEIIGGS--VDGTVRTFDIRVGRE-LSDDLGQPVNC 189 (277)
Q Consensus 116 -~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~--~d~~i~i~d~~~~~~-~~~~~~~~v~~ 189 (277)
+..+-...+.|.+.++..... .............+.+++ ..+.... ..+.|...++..... .........+.
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~--~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~G 170 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHR--QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANG 170 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTC--EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEE
T ss_pred EEEEEECCCCEEEEEecCCCcE--EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcce
Confidence 445555678899888764322 222222223345555554 2333332 245666666643221 11122346789
Q ss_pred EEEeCCCCEEEEE-ecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEECcCccceeeec
Q 023772 190 ISMSNDGNCILAS-CLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 190 ~~~s~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
++++++++.|..+ ...+.|..+|+..... +.+....... ...++.. +.+..+-...+.|...|..+++....+.
T Consensus 171 lalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P--~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 171 LTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHP--FGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCE--EEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCc--eEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 9999976655444 5677899999865433 3333222112 2233333 4455555667889888987776665554
No 319
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.45 E-value=0.32 Score=40.69 Aligned_cols=222 Identities=10% Similarity=0.212 Sum_probs=126.6
Q ss_pred eCCCcEEEEcCCCCeeE-EEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCC
Q 023772 37 GKDRTIRLWNPHRGIHI-KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115 (277)
Q Consensus 37 s~d~~v~iwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~ 115 (277)
+.+..|.|-|+.++... +.-.. --+.-.+|..+.|+-=+ ..++.+||+++.+.+.++.-. .+|.--.|-....
T Consensus 45 ~~~~~vvIiDl~~~~~~~rrpi~----AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~~ 118 (494)
T 1bpo_A 45 GEQAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT 118 (494)
T ss_dssp TTCCEEEEEETTSTTSCEEEECC----CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETTE
T ss_pred CCCCeEEEEECCCCCcceecccc----cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCCe
Confidence 44458888898775433 22211 13455677776665443 689999999999988877643 4565667765543
Q ss_pred EEEEEeCCCcEEEEeCccCCCcceEeecccc----CcEEEEEecCCe---EEEee------cCCcEEEEEccCCcc-ccc
Q 023772 116 VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQ----DSVMSVCLTKTE---IIGGS------VDGTVRTFDIRVGRE-LSD 181 (277)
Q Consensus 116 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~g~------~d~~i~i~d~~~~~~-~~~ 181 (277)
+ +-.+ +..|.-|++.. ...+...++.+. ..+..+..+++. +++|- ..|.+.+|..+.... ...
T Consensus 119 l-~lVT-~taVyHWsi~~-~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ie 195 (494)
T 1bpo_A 119 V-ALVT-DNAVYHWSMEG-ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 195 (494)
T ss_dssp E-EEEC-SSEEEEEESSS-SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEEC
T ss_pred E-EEEc-CCeeEEecccC-CCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchhe
Confidence 3 3332 56799999865 345666665443 335555555543 33332 346677887765421 111
Q ss_pred CCCCCeeEEEEeCCC----CEEEE-Eec---CCeEEEEECCCC---------ceEEEE-eccccceeeeeeEecCCCceE
Q 023772 182 DLGQPVNCISMSNDG----NCILA-SCL---DSTLRLLDRSTG---------ELLQEY-KGHICKSFKTDCCLTNSDAHV 243 (277)
Q Consensus 182 ~~~~~v~~~~~s~~~----~~l~~-~~~---d~~i~~wd~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~l 243 (277)
.+.... ..+-.+| ..|++ +.. .+.+++.++... +.+..+ .......+......++....+
T Consensus 196 Ghaa~F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygvi 273 (494)
T 1bpo_A 196 GHAASF--AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 273 (494)
T ss_dssp CSEEEE--EEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEE
T ss_pred eeeeee--EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEE
Confidence 111111 1111111 11222 221 268899988432 111111 111223345556677777777
Q ss_pred EeecCCCeEEEEECcCccceeeeccC
Q 023772 244 TGGSEDGYIYFWDLVDASVVAKFKAH 269 (277)
Q Consensus 244 ~sgs~d~~i~iwd~~~~~~~~~~~~h 269 (277)
..-+.-|.|.+||++++.++..-+--
T Consensus 274 yviTK~G~i~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 274 FLITKYGYIHLYDLETGTCIYMNRIS 299 (494)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEecCceEEEEecccceeeeeeccc
Confidence 77789999999999999998665533
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.32 E-value=0.31 Score=39.12 Aligned_cols=231 Identities=10% Similarity=0.049 Sum_probs=112.8
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe---eEEE-EeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI---HIKT-YKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR 93 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~---~~~~-~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~ 93 (277)
...+.++.|.+++..++ ++.++.|... ...|+ .+.. .......+.++.+.+ +.++.++.++.|.. ..+.|+
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEECCCeEEE-ECCCCC
Confidence 45789999988777777 5666765332 22222 1110 112245788899976 34444556665444 233333
Q ss_pred eeEEee---cccCceeEEEEecCCCEEEEEeCCCcEEE-EeCccCCCcceEeeccccCcEEEEEecCC-eEEEeecCCcE
Q 023772 94 VIRKFR---GHESEVNAVKFNEYSSVVVSAGYDQSLRA-WDCRSHSTEPIQIIDSFQDSVMSVCLTKT-EIIGGSVDGTV 168 (277)
Q Consensus 94 ~~~~~~---~h~~~v~~i~~~~~~~~l~s~~~d~~i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~d~~i 168 (277)
.-.... .+...+..+.+.+++..++.+ .++.|.. .|- . .............+..+.+.+. .++..+.++.+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~Dg--G-~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~ 185 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDS--G-KNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF 185 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESST--T-SSEEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCC--C-CCCEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence 222211 233456778777766666554 4665532 221 1 1111111222334555555433 34444445554
Q ss_pred EE-EEc--cCCcccccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEecc--ccceeeeeeEecCCCceE
Q 023772 169 RT-FDI--RVGRELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGH--ICKSFKTDCCLTNSDAHV 243 (277)
Q Consensus 169 ~i-~d~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l 243 (277)
.. .|- .+-+.+.......+..+.+++++..+ ..+.+|.+++.+...++--..+... ..........+.+++.++
T Consensus 186 ~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (327)
T 2xbg_A 186 YSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW 264 (327)
T ss_dssp EEEECTTCSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE
T ss_pred EEEeCCCCCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE
Confidence 43 332 12222222334567888999988755 5556788877643223322222110 000112333455666666
Q ss_pred EeecCCCeEEEEECcCc
Q 023772 244 TGGSEDGYIYFWDLVDA 260 (277)
Q Consensus 244 ~sgs~d~~i~iwd~~~~ 260 (277)
+.|. ++.| ++..+.|
T Consensus 265 ~~g~-~g~i-~~S~DgG 279 (327)
T 2xbg_A 265 LAGG-AGAL-LCSQDGG 279 (327)
T ss_dssp EEES-TTCE-EEESSTT
T ss_pred EEeC-CCeE-EEeCCCC
Confidence 6654 6666 3444434
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.17 E-value=0.38 Score=38.66 Aligned_cols=224 Identities=10% Similarity=0.207 Sum_probs=127.0
Q ss_pred eCCCcEEEEcCCCCeeE-EEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCC
Q 023772 37 GKDRTIRLWNPHRGIHI-KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS 115 (277)
Q Consensus 37 s~d~~v~iwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~ 115 (277)
+.+..|.|-|+.++... +.-... -+.-.+|..+.|+-=+ ..++.+||+++.+.+.++.- ..+|.--.|-....
T Consensus 46 ~~~~~VvIiDl~n~~~~~Rrpi~A----dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~ 119 (365)
T 2xzh_A 46 GEQAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT 119 (365)
T ss_dssp TTEEEEEEEETTSTTSCEEEECCC----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSE
T ss_pred CCCCEEEEEECCCCCCcccccccc----ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCe
Confidence 44457888898775432 222222 2344578777665544 67899999999998887764 45676677765544
Q ss_pred EEEEEeCCCcEEEEeCccCCCcceEeecccc----CcEEEEEecCCe---EEEee------cCCcEEEEEccCCcc-ccc
Q 023772 116 VVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQ----DSVMSVCLTKTE---IIGGS------VDGTVRTFDIRVGRE-LSD 181 (277)
Q Consensus 116 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~g~------~d~~i~i~d~~~~~~-~~~ 181 (277)
+ +-.. +..|.-|++.. ...+...++.+. ..+..+..+++. +++|- ..|.+.+|..+.... ...
T Consensus 120 L-~lVT-~taVyHWs~~~-~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ie 196 (365)
T 2xzh_A 120 V-ALVT-DNAVYHWSMEG-ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 196 (365)
T ss_dssp E-EEEE-SSEEEEEESST-TCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEEC
T ss_pred E-EEEc-CCcEEEEcccC-CCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceee
Confidence 3 3333 45799999865 345666655443 335555555543 33332 236677887765431 111
Q ss_pred CCCCCeeEEEEeCCCC----EEEE-Ee---cCCeEEEEECCCC---c------eEEEEe-ccccceeeeeeEecCCCceE
Q 023772 182 DLGQPVNCISMSNDGN----CILA-SC---LDSTLRLLDRSTG---E------LLQEYK-GHICKSFKTDCCLTNSDAHV 243 (277)
Q Consensus 182 ~~~~~v~~~~~s~~~~----~l~~-~~---~d~~i~~wd~~~~---~------~~~~~~-~~~~~~~~~~~~~~~~~~~l 243 (277)
.+ ...-..+-.+|+ .|++ +. ..+.+++-++... . .+..+. ......+......++....+
T Consensus 197 Gh--aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygvi 274 (365)
T 2xzh_A 197 GH--AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 274 (365)
T ss_dssp CS--EEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEE
T ss_pred ee--eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEE
Confidence 11 111111111111 1222 11 1257888887432 1 122111 11123345556667777777
Q ss_pred EeecCCCeEEEEECcCccceeeeccCcc
Q 023772 244 TGGSEDGYIYFWDLVDASVVAKFKAHSL 271 (277)
Q Consensus 244 ~sgs~d~~i~iwd~~~~~~~~~~~~h~~ 271 (277)
..-+.=|.|.+||++++.++..-+--+.
T Consensus 275 yviTK~G~ihlyDleTgt~i~~nrIS~d 302 (365)
T 2xzh_A 275 FLITKYGYIHLYDLETGTCIYMNRISGE 302 (365)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEEeCCcEEEEEEcccCcEEEEeccCCC
Confidence 7778899999999999999876654333
No 322
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.01 E-value=0.75 Score=40.67 Aligned_cols=196 Identities=7% Similarity=-0.069 Sum_probs=115.8
Q ss_pred CcEEEEEEeCCCCEEE-EEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCceeE
Q 023772 19 GAVLAARFNGDGNYCL-SCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKL-ISCGGDRQIFYWDVSTGRVIR 96 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~t~s~d~~v~~wd~~~~~~~~ 96 (277)
..+..++|++.+..|+ +-..++.|..+++........+.........+++.+.++.| ++-...+.|.+.+++......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 4567899998655555 55667888888876544333343333467889998766655 454567889999987554322
Q ss_pred EeecccCceeEEEEecCCCEEEEEe--CCCcEEEEeCccCCCcceEeeccccCcEEEEEecC--CeE-EEeecCCcEEEE
Q 023772 97 KFRGHESEVNAVKFNEYSSVVVSAG--YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTK--TEI-IGGSVDGTVRTF 171 (277)
Q Consensus 97 ~~~~h~~~v~~i~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~g~~d~~i~i~ 171 (277)
-+...-....++++.|....|+-+. ..+.|...++..... ...... ......+.+++ ..+ ++-...+.|..+
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--~~l~~~-~~~P~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--TTLVPN-VGRANGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--EEEECC-CCCcceEEEccccCEEEEEECCCCEEEEE
Confidence 2223334567899998654544444 256677777654322 222222 22344555553 344 444556788888
Q ss_pred EccCCc-ccccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCce
Q 023772 172 DIRVGR-ELSDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGEL 218 (277)
Q Consensus 172 d~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~ 218 (277)
|+.... ++..........+++.. +..+.+-...+.|...|..+++.
T Consensus 194 d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 194 NMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp ETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred cCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence 875432 22111223455777765 45555555678899999766643
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.82 E-value=0.38 Score=38.92 Aligned_cols=55 Identities=5% Similarity=0.026 Sum_probs=26.0
Q ss_pred cEEEEEccCCc--ccccCCCCCeeEEEEeCCCCEEEEEecCC------eEEEEECCCCceEEE
Q 023772 167 TVRTFDIRVGR--ELSDDLGQPVNCISMSNDGNCILASCLDS------TLRLLDRSTGELLQE 221 (277)
Q Consensus 167 ~i~i~d~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~d~------~i~~wd~~~~~~~~~ 221 (277)
.+.+||+.+.+ .+...........+...+++.++.|+.++ .+.++++++++.+..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 46788887542 11111111111122234677778887543 355568877766543
No 324
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.64 E-value=0.81 Score=38.17 Aligned_cols=106 Identities=19% Similarity=0.212 Sum_probs=73.8
Q ss_pred eCCCCEEEEEeCCCcEEEEcCCCCeeEEEEecc----CccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc---------
Q 023772 27 NGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH----GREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR--------- 93 (277)
Q Consensus 27 ~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~--------- 93 (277)
..+|..++.+- ++.||.=++..+...+.++.. ...|..+..+|+|++|+..+ +..|.|-.+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 45666666644 377787777654455565543 23688999999999988775 5588888886321
Q ss_pred ---eeEEeec------ccCceeEEEEecC---CCEEEEEeCCCcEEEEeCccC
Q 023772 94 ---VIRKFRG------HESEVNAVKFNEY---SSVVVSAGYDQSLRAWDCRSH 134 (277)
Q Consensus 94 ---~~~~~~~------h~~~v~~i~~~~~---~~~l~s~~~d~~i~iwd~~~~ 134 (277)
..+++.- ...+|..+.|+|- +..|++-..|++|++||+...
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 1223332 2467999999986 457888889999999999753
No 325
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.61 E-value=0.72 Score=37.44 Aligned_cols=101 Identities=14% Similarity=0.144 Sum_probs=62.6
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCee--EEEEe---ccCccEEEEEEcCC---CCEEEEEeC-C-----Cc
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIH--IKTYK---SHGREVRDVHVTAD---NSKLISCGG-D-----RQ 83 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~---~h~~~v~~~~~~~~---~~~l~t~s~-d-----~~ 83 (277)
-..-..++|.|+|+++++ ..++.|++++ .++. +..+. ........++++|+ +..|+.+.. . ..
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 344568999999996665 5569999998 4432 11111 12346889999998 555554432 2 67
Q ss_pred EEEEECCCCc-----e-eEEee---cccCceeEEEEecCCCEEEEEe
Q 023772 84 IFYWDVSTGR-----V-IRKFR---GHESEVNAVKFNEYSSVVVSAG 121 (277)
Q Consensus 84 v~~wd~~~~~-----~-~~~~~---~h~~~v~~i~~~~~~~~l~s~~ 121 (277)
|..++...+. . +..+. ........+.|.|++.+.++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 8888876432 1 12232 1111235799999998777654
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.56 E-value=1.6 Score=42.36 Aligned_cols=217 Identities=10% Similarity=0.193 Sum_probs=117.9
Q ss_pred eCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeecccCceeEEEEecCCCE
Q 023772 37 GKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSV 116 (277)
Q Consensus 37 s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~ 116 (277)
+....|.|-|+.++...... .-.--+.-.+|..+.|+-= ...++.+||+++...+.++.- ..+|.--.|-....+
T Consensus 45 ~~~~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l 119 (1630)
T 1xi4_A 45 GEQAQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTV 119 (1630)
T ss_pred CCCceEEEEECCCCCCcccc---cccchhhccCCCcceEEEe-cCCeEEEeehHHhhhhccccc-CCCceEEEecCCCee
Confidence 44457888888775432111 1111234456766555443 478999999999887777654 445666677655443
Q ss_pred EEEEeCCCcEEEEeCccCCCcceEeeccc----cCcEEEEEecCCe---EEEe------ecCCcEEEEEccCCcc-cccC
Q 023772 117 VVSAGYDQSLRAWDCRSHSTEPIQIIDSF----QDSVMSVCLTKTE---IIGG------SVDGTVRTFDIRVGRE-LSDD 182 (277)
Q Consensus 117 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~~g------~~d~~i~i~d~~~~~~-~~~~ 182 (277)
+-.+ +..|.-|++.. ...|...+..+ ...+..+..+++. +++| ...|.+.+|..+.+.. ....
T Consensus 120 -~lVT-~~aVyHW~~~~-~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ieg 196 (1630)
T 1xi4_A 120 -ALVT-DNAVYHWSMEG-ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (1630)
T ss_pred -EEEc-CCeEEEeccCC-CCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhH
Confidence 2222 45799999864 33344444433 2234455555433 3333 2457788888765421 1111
Q ss_pred C------------CCCeeEEEEeCCCCEEEEEecCCeEEEEECCCC---c------eEEEE-eccccceeeeeeEecCCC
Q 023772 183 L------------GQPVNCISMSNDGNCILASCLDSTLRLLDRSTG---E------LLQEY-KGHICKSFKTDCCLTNSD 240 (277)
Q Consensus 183 ~------------~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~---~------~~~~~-~~~~~~~~~~~~~~~~~~ 240 (277)
+ ..+..-++|.... ...+.+++-++... . .+..+ .......+......++..
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~------~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~ 270 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRG------QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH 270 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEec------CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc
Confidence 1 1111122222111 11267888887432 1 11111 111112344445567777
Q ss_pred ceEEeecCCCeEEEEECcCccceeeec
Q 023772 241 AHVTGGSEDGYIYFWDLVDASVVAKFK 267 (277)
Q Consensus 241 ~~l~sgs~d~~i~iwd~~~~~~~~~~~ 267 (277)
..+..-+.-|.|.+||+.+|.++..-+
T Consensus 271 g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 271 DVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CEEEEEecCceEEEEecccchhhhhcc
Confidence 777777889999999999998875443
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.10 E-value=1.5 Score=39.20 Aligned_cols=191 Identities=12% Similarity=0.093 Sum_probs=97.3
Q ss_pred CCCCEEEEEeCC----CcEEEEcCCCCeeEEEE-e------ccCccEEEEEEcC-CCCEEEEEeCC------CcEEEEEC
Q 023772 28 GDGNYCLSCGKD----RTIRLWNPHRGIHIKTY-K------SHGREVRDVHVTA-DNSKLISCGGD------RQIFYWDV 89 (277)
Q Consensus 28 ~~~~~l~s~s~d----~~v~iwd~~~~~~~~~~-~------~h~~~v~~~~~~~-~~~~l~t~s~d------~~v~~wd~ 89 (277)
.++..++.||.+ ..+.+||+.+++....- . .....-.++...+ +++.++.||.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777754 46788888877654333 1 1111123344443 66677777644 35788888
Q ss_pred CCCc--eeEEeecccCceeEEEEecCCCEEEEEeCCC--cEEEEeCccCCCcceEe---eccccCcEEEEEec---CCeE
Q 023772 90 STGR--VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQ--SLRAWDCRSHSTEPIQI---IDSFQDSVMSVCLT---KTEI 159 (277)
Q Consensus 90 ~~~~--~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~ 159 (277)
.+.+ .+..+..... -.++....++++++.||.++ .+.+||+.+..-..... .........++..+ ...+
T Consensus 476 ~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 7643 2222211111 12233324778888887655 68899986542111110 00001111112223 3345
Q ss_pred EEeec--C-----CcEEEEEccCCcc-----cc---c--CCCCCeeEEEEeCCCCEEEEEec--------CCeEEEEECC
Q 023772 160 IGGSV--D-----GTVRTFDIRVGRE-----LS---D--DLGQPVNCISMSNDGNCILASCL--------DSTLRLLDRS 214 (277)
Q Consensus 160 ~~g~~--d-----~~i~i~d~~~~~~-----~~---~--~~~~~v~~~~~s~~~~~l~~~~~--------d~~i~~wd~~ 214 (277)
+.|+. + ..+.+||+.+..- +. . .....-.+++...++..++.|+. ...+.+||..
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 55655 2 3588899876651 11 1 01111112333333677777764 3458999998
Q ss_pred CCceE
Q 023772 215 TGELL 219 (277)
Q Consensus 215 ~~~~~ 219 (277)
+++..
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 87654
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.00 E-value=2.6 Score=40.21 Aligned_cols=173 Identities=11% Similarity=0.164 Sum_probs=97.7
Q ss_pred cEEEEECCCCceeEEeecc-cCceeEEEEe---cC-CCEEEEEe----------CCCcEEEEeCccCCCcceEeeccccC
Q 023772 83 QIFYWDVSTGRVIRKFRGH-ESEVNAVKFN---EY-SSVVVSAG----------YDQSLRAWDCRSHSTEPIQIIDSFQD 147 (277)
Q Consensus 83 ~v~~wd~~~~~~~~~~~~h-~~~v~~i~~~---~~-~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~ 147 (277)
.+++.|..+.+.+..+.-- ...+.+++.- .+ ..+++.|. ..|.|.+|++.....+.+ ......+
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv-~~~~v~g 886 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTV-AEKEVKG 886 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEE-EEEEESS
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEE-EEEEcCC
Confidence 4777887777766555432 2234444432 22 35677665 347799998863222111 1123456
Q ss_pred cEEEEEecCCeEEEeecCCcEEEEEccCCcccccCC--CCCeeEEEEeCCCCEEEEEecCCeEEEE--ECCCCceEEEEe
Q 023772 148 SVMSVCLTKTEIIGGSVDGTVRTFDIRVGRELSDDL--GQPVNCISMSNDGNCILASCLDSTLRLL--DRSTGELLQEYK 223 (277)
Q Consensus 148 ~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~d~~i~~w--d~~~~~~~~~~~ 223 (277)
.+.+++.-...+++| ..+++++|++...+.+.... -..+..+.....+++++.|..-..+.++ +...++++ .+.
T Consensus 887 ~v~al~~~~g~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~-~~a 964 (1158)
T 3ei3_A 887 AVYSMVEFNGKLLAS-INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE-EIA 964 (1158)
T ss_dssp CEEEEEEETTEEEEE-ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEE-EEE
T ss_pred cCEEEeeeCCEEEEE-cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEE-EEE
Confidence 677777544555544 46889999997654332111 1113333444457889998877777764 44444443 333
Q ss_pred ccccceeeeeeEecCCCceEEeecCCCeEEEEECcC
Q 023772 224 GHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWDLVD 259 (277)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd~~~ 259 (277)
........+.+.+-.+ ..++.+..+|++.+.....
T Consensus 965 ~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 965 RDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred eecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 3333344444444443 4667788999999887554
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.74 E-value=2.2 Score=38.18 Aligned_cols=194 Identities=9% Similarity=0.091 Sum_probs=96.1
Q ss_pred CCCCEEEEEeCC----CcEEEEECCCCceeEEe-e------cccCceeEEEEec-CCCEEEEEeCCC------cEEEEeC
Q 023772 70 ADNSKLISCGGD----RQIFYWDVSTGRVIRKF-R------GHESEVNAVKFNE-YSSVVVSAGYDQ------SLRAWDC 131 (277)
Q Consensus 70 ~~~~~l~t~s~d----~~v~~wd~~~~~~~~~~-~------~h~~~v~~i~~~~-~~~~l~s~~~d~------~i~iwd~ 131 (277)
.++..++.||.+ ..+.+||..+++-...- . .....-.++...+ ++++++.||.++ .+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 45788888766422111 0 1111112333343 677777777543 4777887
Q ss_pred ccCCCcceEeeccccCcEEEEEe-cCCeEEEeecCC--cEEEEEccCCc--cccc----CCC-CCeeEEEEeCC-CCEEE
Q 023772 132 RSHSTEPIQIIDSFQDSVMSVCL-TKTEIIGGSVDG--TVRTFDIRVGR--ELSD----DLG-QPVNCISMSND-GNCIL 200 (277)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~d~--~i~i~d~~~~~--~~~~----~~~-~~v~~~~~s~~-~~~l~ 200 (277)
.+..-.....+.........+.+ .+..++.|+.++ .+.+||+.+.. .+.. ... ..-.++.+..+ +..++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 65321111111111111223333 455566676654 68889987653 1111 001 11223555655 66677
Q ss_pred EEec--C-----CeEEEEECCCCce-----EEEEecc-ccceeeeeeEecCCCceEEeecC--------CCeEEEEECcC
Q 023772 201 ASCL--D-----STLRLLDRSTGEL-----LQEYKGH-ICKSFKTDCCLTNSDAHVTGGSE--------DGYIYFWDLVD 259 (277)
Q Consensus 201 ~~~~--d-----~~i~~wd~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~l~sgs~--------d~~i~iwd~~~ 259 (277)
.|+. + ..+..||+.+.+. -...... ........++...++++++.|+. ...+.+||..+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 7765 2 3588999988761 1222211 11111122223332555555542 35699999988
Q ss_pred ccce
Q 023772 260 ASVV 263 (277)
Q Consensus 260 ~~~~ 263 (277)
.+..
T Consensus 636 ~~W~ 639 (695)
T 2zwa_A 636 ETLT 639 (695)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7554
No 330
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.16 E-value=2.2 Score=35.67 Aligned_cols=70 Identities=14% Similarity=0.165 Sum_probs=45.6
Q ss_pred CCCeeEEEEeCC---CCEEEEEecCCeEEEEECCCC--ceEEEEeccc-------cceeeeeeEecCCCceEEe--ecCC
Q 023772 184 GQPVNCISMSND---GNCILASCLDSTLRLLDRSTG--ELLQEYKGHI-------CKSFKTDCCLTNSDAHVTG--GSED 249 (277)
Q Consensus 184 ~~~v~~~~~s~~---~~~l~~~~~d~~i~~wd~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~s--gs~d 249 (277)
..+|..+.|+|- +..|++-..|+.||+||+... ++. .+.... ......+.||++++-.|.. .+..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~ 202 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEG 202 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTS
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCC
Confidence 457999999995 567888899999999999752 222 232110 0123456678886654554 4577
Q ss_pred CeEEE
Q 023772 250 GYIYF 254 (277)
Q Consensus 250 ~~i~i 254 (277)
|-|+-
T Consensus 203 GDIYA 207 (452)
T 3pbp_A 203 GDIFA 207 (452)
T ss_dssp CEEEE
T ss_pred CCEEE
Confidence 77764
No 331
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.85 E-value=3.6 Score=37.09 Aligned_cols=229 Identities=11% Similarity=0.130 Sum_probs=122.3
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEe----ccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK----SHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGR 93 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~ 93 (277)
...|.++.-..+|.+-+ |..+| +..||...- ..+. .....|.++....++ .|-.|..+| +..||..+.+
T Consensus 21 ~n~V~~I~qD~~G~lWi-gT~~G-L~ryDG~~~---~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~ 93 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWI-GSNKG-LFSYDGYST---QQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADR 93 (758)
T ss_dssp CCCEEEEEECTTSCEEE-EESSC-EEEECSSCE---EECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTE
T ss_pred cceEEEEEECCCCCEEE-EECCC-ccccCCCce---EEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCE
Confidence 45699998888886544 44555 667885332 1221 123458888777665 455555555 7899987764
Q ss_pred eeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEee-c-cccCcEEEEEecC-CeEEEeecCCcEEE
Q 023772 94 VIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQII-D-SFQDSVMSVCLTK-TEIIGGSVDGTVRT 170 (277)
Q Consensus 94 ~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~-~~~~~~~~~~~~~-~~~~~g~~d~~i~i 170 (277)
...........|.++.. .++.+ -.++.+ -+..+|............ . .....+.++..+. ..+..|+.+| +..
T Consensus 94 f~~~~~~~~~~i~~i~~-~~g~l-Wigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~G-l~~ 169 (758)
T 3ott_A 94 YEQPETDFPTDVRTMAL-QGDTL-WLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNG-LCR 169 (758)
T ss_dssp ECCCSCCCCSCEEEEEE-ETTEE-EEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETTE-EEE
T ss_pred EECcccCCCceEEEEEe-cCCcE-EEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCC-Hhh
Confidence 32211112335666654 34544 445555 477888754322111000 0 1123466666553 4466676554 667
Q ss_pred EEccCCccc--ccC-----CCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceE
Q 023772 171 FDIRVGREL--SDD-----LGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHV 243 (277)
Q Consensus 171 ~d~~~~~~~--~~~-----~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (277)
||....+.. ... ....|.++..++++..|..|.. +.+..+|..+++... +.... ...+...+..+++.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~-~~~l~-~~~i~~i~~d~~g~lW 246 (758)
T 3ott_A 170 YIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQ-TEAFH-NNSIKSLALDGNGDLL 246 (758)
T ss_dssp EETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEE-EEEEE-EEEEEEEEECTTCCEE
T ss_pred CccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEe-ccCCC-CCeEEEEEEcCCCCEE
Confidence 887654321 111 1224888888887765555554 468889987765432 22111 1122333334455543
Q ss_pred EeecCCCeEEEEECcCccc
Q 023772 244 TGGSEDGYIYFWDLVDASV 262 (277)
Q Consensus 244 ~sgs~d~~i~iwd~~~~~~ 262 (277)
+ |+.+ -+.+++..+++.
T Consensus 247 i-gT~~-Gl~~~~~~~~~~ 263 (758)
T 3ott_A 247 A-GTDN-GLYVYHNDTTPL 263 (758)
T ss_dssp E-EETT-EEEEECCTTSCC
T ss_pred E-EeCC-ceeEEecCCCcE
Confidence 3 3444 478888876654
No 332
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.70 E-value=2.3 Score=34.46 Aligned_cols=102 Identities=9% Similarity=0.172 Sum_probs=62.6
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCe-eEEEEe---ccCccEEEEEEcCC---CCEEEEEeC----C----C
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYK---SHGREVRDVHVTAD---NSKLISCGG----D----R 82 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~---~h~~~v~~~~~~~~---~~~l~t~s~----d----~ 82 (277)
-..-..++|.|+|+++++ ..++.|++++ ..++ .+..+. ........++++|+ +..|+.+.. + .
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 345678999999986655 5569999997 3454 222211 12346889999997 556554432 3 5
Q ss_pred cEEEEECCCC-------cee-EEeecc-cCceeEEEEecCCCEEEEEe
Q 023772 83 QIFYWDVSTG-------RVI-RKFRGH-ESEVNAVKFNEYSSVVVSAG 121 (277)
Q Consensus 83 ~v~~wd~~~~-------~~~-~~~~~h-~~~v~~i~~~~~~~~l~s~~ 121 (277)
.|..|+...+ +.+ ..+... ...-..+.|.|++.+.++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 7778877654 111 112211 11235689999998877754
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.70 E-value=2.3 Score=34.44 Aligned_cols=109 Identities=11% Similarity=0.093 Sum_probs=67.5
Q ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeE--EEE----eccCccEEEEEEcCC---CCEEEEE---eC
Q 023772 13 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI--KTY----KSHGREVRDVHVTAD---NSKLISC---GG 80 (277)
Q Consensus 13 ~l~~H~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~--~~~----~~h~~~v~~~~~~~~---~~~l~t~---s~ 80 (277)
++..--..-..++|.|+|+++++--..|.|++++...++.. ..+ .........++++|+ +.+|+.. ..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 34444556679999999998888665899999987655432 111 123456789999985 4555432 24
Q ss_pred CCcEEEEECCCC----------cee-EEeec-ccCceeEEEEecCCCEEEEEe
Q 023772 81 DRQIFYWDVSTG----------RVI-RKFRG-HESEVNAVKFNEYSSVVVSAG 121 (277)
Q Consensus 81 d~~v~~wd~~~~----------~~~-~~~~~-h~~~v~~i~~~~~~~~l~s~~ 121 (277)
++.|.-|.+..+ +.+ ..+.. ....-..|.|.|++.+.++.+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 556666766541 111 12221 111235689999998888765
No 334
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.60 E-value=2.1 Score=33.54 Aligned_cols=222 Identities=12% Similarity=0.060 Sum_probs=111.8
Q ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeEEe
Q 023772 20 AVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST-GRVIRKF 98 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~-~~~~~~~ 98 (277)
.|..++....-..++ . ||.|..|-....-.+..-......|..++.......++ . ||.|..|-... +++- .-
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg-~P 97 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTT-VP 97 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTC-CC
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCC-CC
Confidence 566666554433333 4 89999996433211111111123566776655443444 4 89999997654 2211 00
Q ss_pred ecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecCCcEEEEEccCCcc
Q 023772 99 RGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGRE 178 (277)
Q Consensus 99 ~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~ 178 (277)
..-...|..++.......++ . ||.+..|-......... .......+..+.......+.-. ||.+..|-.....+
T Consensus 98 ~~~~~~v~~ia~G~~hs~al--~-~G~v~~wG~n~~gqlg~--~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWASYAL--K-DGKVIAWGDDSDGQTTV--PAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEEETTEEEEE--E-TTEEEEEECCTTSTTSC--CGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTST
T ss_pred cccCCCeEEEECcCCEEEEE--e-CCeEEEecCCCCCcCCC--CccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCC
Confidence 11134677777766544444 4 89999997543221111 1112345666666555543334 79999987654322
Q ss_pred c--ccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEeecCCCeEEEEE
Q 023772 179 L--SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGGSEDGYIYFWD 256 (277)
Q Consensus 179 ~--~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~iwd 256 (277)
+ +......|..++-..... ++. .||.++.|=......+. ..... ...+...+..... .++. . ||.|+.|-
T Consensus 172 lg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg-~p~~~-~~~v~~i~~G~~h-~~al-~-~g~v~~wG 243 (282)
T 3qhy_B 172 TTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTT-VPTEA-LSGVSAIASGEWY-SLAL-K-NGKVIAWG 243 (282)
T ss_dssp TSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTC-CCGGG-GSSCCEEEECSSC-EEEE-E-TTEEEEES
T ss_pred CCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCC-CCccc-CCCceEEEcCCCE-EEEE-E-CCEEEEec
Confidence 2 222234566666554433 333 59999999764321111 00000 1112222222222 2333 2 99999997
Q ss_pred CcCccc
Q 023772 257 LVDASV 262 (277)
Q Consensus 257 ~~~~~~ 262 (277)
......
T Consensus 244 ~n~~gq 249 (282)
T 3qhy_B 244 SSRTAP 249 (282)
T ss_dssp TTCCCC
T ss_pred CCCCcc
Confidence 665433
No 335
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.52 E-value=3 Score=35.17 Aligned_cols=105 Identities=11% Similarity=0.061 Sum_probs=63.4
Q ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeE--EEEec------cCccEEEEEEcCC---CCEEEEEeC------
Q 023772 18 EGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHI--KTYKS------HGREVRDVHVTAD---NSKLISCGG------ 80 (277)
Q Consensus 18 ~~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~--~~~~~------h~~~v~~~~~~~~---~~~l~t~s~------ 80 (277)
-..-..++|.|+|+++++--..+.|++++..++... ..+.. ..+....++|+|+ +.+|+.+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345669999999998887554457888876555432 22221 2345679999996 555554432
Q ss_pred -------CCcEEEEECCCC-------ceeE-Eeec-ccCceeEEEEecCCCEEEEEeC
Q 023772 81 -------DRQIFYWDVSTG-------RVIR-KFRG-HESEVNAVKFNEYSSVVVSAGY 122 (277)
Q Consensus 81 -------d~~v~~wd~~~~-------~~~~-~~~~-h~~~v~~i~~~~~~~~l~s~~~ 122 (277)
...|.-|+...+ +.+. .+.. .......|.|.+++.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666655322 1121 1221 1224678999999998887654
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.08 E-value=2.2 Score=32.24 Aligned_cols=104 Identities=4% Similarity=0.004 Sum_probs=57.9
Q ss_pred CceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCc-----ceEeec-cccCcEEEEEecCCeEEEeecCCcEEEEEccCC
Q 023772 103 SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTE-----PIQIID-SFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVG 176 (277)
Q Consensus 103 ~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~ 176 (277)
..+..++|+|++.+.+. .+|.+.-.+..+.... ...+-. ... .-.++-++++..+-++.||.|.-++-.+.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAVSKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEEETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEeCCCEEEEeCCCcC
Confidence 36679999998886655 7777666665332111 011100 000 01345556655333337899887775432
Q ss_pred cc--cc---cCC-C---CCeeEEEEeCCCCEEEEEecCCeEEEE
Q 023772 177 RE--LS---DDL-G---QPVNCISMSNDGNCILASCLDSTLRLL 211 (277)
Q Consensus 177 ~~--~~---~~~-~---~~v~~~~~s~~~~~l~~~~~d~~i~~w 211 (277)
.. +. ... . ..+..+.|+|+|...++. |+.++-.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 21 10 000 1 367899999999876665 7876443
No 337
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.68 E-value=3.5 Score=33.55 Aligned_cols=153 Identities=12% Similarity=0.155 Sum_probs=77.4
Q ss_pred cEEEEEEcCCCCEEEEEe------------CCCcEEEEECCCC--cee-EEeec-----ccCceeEEEEec--CCC-EEE
Q 023772 62 EVRDVHVTADNSKLISCG------------GDRQIFYWDVSTG--RVI-RKFRG-----HESEVNAVKFNE--YSS-VVV 118 (277)
Q Consensus 62 ~v~~~~~~~~~~~l~t~s------------~d~~v~~wd~~~~--~~~-~~~~~-----h~~~v~~i~~~~--~~~-~l~ 118 (277)
....+++.+++..+++++ .+|.|.++|.++. +.. -.+.+ ..-....+.+.+ +++ +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 456677777664444442 6899999998742 211 11222 223556777765 343 344
Q ss_pred EEe-C--CCcEEEEeCccCCCc--ceEeeccc-cCcEEEEEecCC-eEEEeec------------------CCcEEEEEc
Q 023772 119 SAG-Y--DQSLRAWDCRSHSTE--PIQIIDSF-QDSVMSVCLTKT-EIIGGSV------------------DGTVRTFDI 173 (277)
Q Consensus 119 s~~-~--d~~i~iwd~~~~~~~--~~~~~~~~-~~~~~~~~~~~~-~~~~g~~------------------d~~i~i~d~ 173 (277)
.+. . +.+|.+|++...... .+..+... -.....+...+. .++.+.. .+.+..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 432 2 467788876543221 11112111 122334433332 2332221 133444444
Q ss_pred cCCcccccCCCCCeeEEEEeCCCCEEEEE-ecCCeEEEEECCC
Q 023772 174 RVGRELSDDLGQPVNCISMSNDGNCILAS-CLDSTLRLLDRST 215 (277)
Q Consensus 174 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~~wd~~~ 215 (277)
...+.+. ..-...+.++|+||++.|..+ +..+.|+.|++..
T Consensus 211 ~~~~~~~-~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 211 NDVRVVA-EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp TCCEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CeEEEee-cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 2111111 111357889999999876555 4678999999853
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.17 E-value=6.4 Score=35.44 Aligned_cols=234 Identities=10% Similarity=0.083 Sum_probs=125.0
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEecc------CccEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH------GREVRDVHVTADNSKLISCGGDRQIFYWDVSTG 92 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~ 92 (277)
..|.++....+|.+.+. .. +-+..++..+++... +... ...|.++...+++..|-.|.. +-+..+|..++
T Consensus 146 ~~i~~i~~d~~g~lWig-t~-~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVG-TY-NGLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp SCEEEEEECTTCCEEEE-ET-TEEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CeEEEEEEcCCCCEEEE-eC-CCHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 45788887778876664 33 357778877665332 2111 124888888777665444443 45888898776
Q ss_pred ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEee-----ccccCcEEEEEecCC-eEEEeecCC
Q 023772 93 RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQII-----DSFQDSVMSVCLTKT-EIIGGSVDG 166 (277)
Q Consensus 93 ~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~g~~d~ 166 (277)
+...........|.++...+++.+.+.. .+| +.+++............ .-....+.++..+.. .+..|+..|
T Consensus 222 ~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G 299 (758)
T 3ott_A 222 QIKQTEAFHNNSIKSLALDGNGDLLAGT-DNG-LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG 299 (758)
T ss_dssp EEEEEEEEEEEEEEEEEECTTCCEEEEE-TTE-EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS
T ss_pred eEEeccCCCCCeEEEEEEcCCCCEEEEe-CCc-eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc
Confidence 5432111123457888877777776644 444 77788654322111100 011234667766654 477787766
Q ss_pred cEEEEEccCCcc-cc------cCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCCc--eEEEEecc-----ccceeee
Q 023772 167 TVRTFDIRVGRE-LS------DDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTGE--LLQEYKGH-----ICKSFKT 232 (277)
Q Consensus 167 ~i~i~d~~~~~~-~~------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~~~-----~~~~~~~ 232 (277)
+.++....... .. ......|.++.-+.+|.. -.|..+ -+..++..+++ ....+... .....+.
T Consensus 300 -l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~l-WiGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 376 (758)
T 3ott_A 300 -ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFY-WFGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIR 376 (758)
T ss_dssp -EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCE-EEEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCEE
T ss_pred -ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCE-EEeeCC-cceeecccccccceeEEeccCCcCCCCCCCceE
Confidence 54443221111 00 112346888888888874 444555 47777765532 22223211 0011122
Q ss_pred eeEecCCCceEEeecCCCeEEEEECcCccce
Q 023772 233 DCCLTNSDAHVTGGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 233 ~~~~~~~~~~l~sgs~d~~i~iwd~~~~~~~ 263 (277)
......++.+-+ |+ ++-+..||..+++..
T Consensus 377 ~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~ 405 (758)
T 3ott_A 377 HIYEDKEQQLWI-AT-DGSINRYDYATRQFI 405 (758)
T ss_dssp EEEECTTSCEEE-EE-TTEEEEEETTTTEEE
T ss_pred EEEECCCCCEEE-Ee-CCcHhhcCcCCCcEE
Confidence 223334454333 34 346888998877553
No 339
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.08 E-value=3.5 Score=32.22 Aligned_cols=164 Identities=15% Similarity=0.135 Sum_probs=86.0
Q ss_pred CCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeEEeecccCceeEEEEecCCCEE
Q 023772 39 DRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVST-GRVIRKFRGHESEVNAVKFNEYSSVV 117 (277)
Q Consensus 39 d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~-~~~~~~~~~h~~~v~~i~~~~~~~~l 117 (277)
||.|..|-....-.+..-..-...|..++.-.....++ . ||.|..|-... +++- .-......|..++.......+
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al--~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~~~~~ 155 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYAL--K-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVYTALA 155 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEE--E-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSEEEE
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEE--e-CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccCEEEE
Confidence 77777775332111111111123577776665443444 3 89999997654 2221 111123457667665544333
Q ss_pred EEEeCCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeecCCcEEEEEccCCccc--ccCCCCCeeEEEEeCC
Q 023772 118 VSAGYDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSVDGTVRTFDIRVGREL--SDDLGQPVNCISMSND 195 (277)
Q Consensus 118 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~--~~~~~~~v~~~~~s~~ 195 (277)
+ . ||.+..|-........+ .......+..+.......+.- .||.+..|-....-++ .......|..++-...
T Consensus 156 l--~-~G~v~~wG~n~~gqlg~--p~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~ 229 (282)
T 3qhy_B 156 V--K-NGGVIAWGDNYFGQTTV--PAEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW 229 (282)
T ss_dssp E--E-TTEEEEEECCTTSTTSC--CGGGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS
T ss_pred E--E-CCEEEEecCCCCCCCCC--ceecCCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC
Confidence 3 3 79999997543221111 111234566776666654333 6999999975433222 1112235666665544
Q ss_pred CCEEEEEecCCeEEEEECCC
Q 023772 196 GNCILASCLDSTLRLLDRST 215 (277)
Q Consensus 196 ~~~l~~~~~d~~i~~wd~~~ 215 (277)
.. ++.. ||.++.|=...
T Consensus 230 h~-~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 230 YS-LALK--NGKVIAWGSSR 246 (282)
T ss_dssp CE-EEEE--TTEEEEESTTC
T ss_pred EE-EEEE--CCEEEEecCCC
Confidence 43 3333 99999997644
No 340
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.07 E-value=4.1 Score=32.97 Aligned_cols=103 Identities=13% Similarity=0.136 Sum_probs=59.3
Q ss_pred CCcEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCCeeEEEE-------eccCccEEEEEEcCC---CCEEEEEe-C-----
Q 023772 18 EGAVLAARFNGDGN-YCLSCGKDRTIRLWNPHRGIHIKTY-------KSHGREVRDVHVTAD---NSKLISCG-G----- 80 (277)
Q Consensus 18 ~~~V~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~-------~~h~~~v~~~~~~~~---~~~l~t~s-~----- 80 (277)
-..-..++|.|+|+ ++++ ...|.|++++.. +.....+ .........++++|+ +.+|+.+. .
T Consensus 17 l~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp ESSEEEEEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCCcEEEEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 34567999999999 6555 567899999853 3321111 112345689999996 55555442 2
Q ss_pred --CCcEEEEECCCC--c-----ee-EEeec---ccCceeEEEEecCCCEEEEEeC
Q 023772 81 --DRQIFYWDVSTG--R-----VI-RKFRG---HESEVNAVKFNEYSSVVVSAGY 122 (277)
Q Consensus 81 --d~~v~~wd~~~~--~-----~~-~~~~~---h~~~v~~i~~~~~~~~l~s~~~ 122 (277)
...|..|++..+ . .+ ..+.. ....-..+.|.|++.+.++.+.
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 235666666432 1 11 11110 0112356999999977776543
No 341
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=91.87 E-value=4.3 Score=32.81 Aligned_cols=103 Identities=10% Similarity=0.066 Sum_probs=56.4
Q ss_pred CCcEEEEEEeCC---CCEEEEE-eCC-----CcEEEEcCCCCe-----e-EEEEe---ccCccEEEEEEcCCCCEEEEEe
Q 023772 18 EGAVLAARFNGD---GNYCLSC-GKD-----RTIRLWNPHRGI-----H-IKTYK---SHGREVRDVHVTADNSKLISCG 79 (277)
Q Consensus 18 ~~~V~~~~~~~~---~~~l~s~-s~d-----~~v~iwd~~~~~-----~-~~~~~---~h~~~v~~~~~~~~~~~l~t~s 79 (277)
......++|+|+ +..|+.+ ... ..|..|+...+. . +..+. ...+....++|.|++...++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 456789999998 4444433 322 567777765431 1 12232 1112346899999997777654
Q ss_pred CC-------------CcEEEEECCCC-------------c-eeEEeecccCceeEEEEec-CCCEEEEEeC
Q 023772 80 GD-------------RQIFYWDVSTG-------------R-VIRKFRGHESEVNAVKFNE-YSSVVVSAGY 122 (277)
Q Consensus 80 ~d-------------~~v~~wd~~~~-------------~-~~~~~~~h~~~v~~i~~~~-~~~~l~s~~~ 122 (277)
.. ++|.-++.+.. . .+. -.++.. ...++|++ +++++++-..
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~-a~G~rn-p~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVY-SLGHRN-PQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEE-EECCSE-ECCCEECTTTCCEEEEEEC
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEE-EEcCCC-cccEEEECCCCCEEEEEcC
Confidence 21 45655655431 1 111 123333 45688998 5666665433
No 342
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.39 E-value=3.6 Score=31.04 Aligned_cols=172 Identities=6% Similarity=-0.069 Sum_probs=86.2
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCe------eEEEEec-cCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce------e
Q 023772 29 DGNYCLSCGKDRTIRLWNPHRGI------HIKTYKS-HGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRV------I 95 (277)
Q Consensus 29 ~~~~l~s~s~d~~v~iwd~~~~~------~~~~~~~-h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~------~ 95 (277)
....|+...+| +++.=.+..+. ...++-. .=..+..++|+|++.+.+ . .+|.+.-.+..+... -
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYa-V-~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYG-V-LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEE-E-ETTEEEEESCCCSTTCCHHHHC
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEE-E-eCCeEEEECCCCCCcccccccc
Confidence 34566667777 54444333322 1122211 123677999999776444 4 677666655543211 1
Q ss_pred EEeec-ccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcc-----eEeeccccCcEEEEEecCCe-EEEeecCCcE
Q 023772 96 RKFRG-HESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEP-----IQIIDSFQDSVMSVCLTKTE-IIGGSVDGTV 168 (277)
Q Consensus 96 ~~~~~-h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~g~~d~~i 168 (277)
..+.. --....++.|.+++.+.++ .||.|.-++..+..... ..+-...-..+..+.+.++. |.... |+.+
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~l 156 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQF 156 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEE
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcE
Confidence 11110 0011367889999988877 66999888764322111 11111111344666667665 33444 7775
Q ss_pred EEEEccCCcc--cc------c-CCCCCeeEEEEeCCCCEEEEEecCCeE
Q 023772 169 RTFDIRVGRE--LS------D-DLGQPVNCISMSNDGNCILASCLDSTL 208 (277)
Q Consensus 169 ~i~d~~~~~~--~~------~-~~~~~v~~~~~s~~~~~l~~~~~d~~i 208 (277)
.-.-...... .. . ..-...+.+.|.+++..+++. ++.+
T Consensus 157 yr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 157 YKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp EEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred EecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 4322221110 00 0 011234556788888765554 6633
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.80 E-value=9.2 Score=35.66 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=33.2
Q ss_pred CeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 186 ~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677788888999999999999999999999988754
No 344
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=85.44 E-value=13 Score=29.98 Aligned_cols=101 Identities=12% Similarity=0.132 Sum_probs=55.3
Q ss_pred CCcEEEEEEeCC---CCEEE-EEeC---C----CcEEEEcCCCC-------ee-EEEEec-cCccEEEEEEcCCCCEEEE
Q 023772 18 EGAVLAARFNGD---GNYCL-SCGK---D----RTIRLWNPHRG-------IH-IKTYKS-HGREVRDVHVTADNSKLIS 77 (277)
Q Consensus 18 ~~~V~~~~~~~~---~~~l~-s~s~---d----~~v~iwd~~~~-------~~-~~~~~~-h~~~v~~~~~~~~~~~l~t 77 (277)
.+....++|+|+ +..|+ +-+. + ..|..|+...+ +. +..+.. ..+....+.|.|++.++++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 356789999997 44444 4332 3 45666765443 11 111221 1123467999999987777
Q ss_pred EeC-------------CCcEEEEECCCC---------ceeEEeecccCceeEEEEec-CCCEEEEE
Q 023772 78 CGG-------------DRQIFYWDVSTG---------RVIRKFRGHESEVNAVKFNE-YSSVVVSA 120 (277)
Q Consensus 78 ~s~-------------d~~v~~wd~~~~---------~~~~~~~~h~~~v~~i~~~~-~~~~l~s~ 120 (277)
.+. .++|.-++.+.. ..+. -.++..+ ..++|++ +++++++-
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~-a~G~rnp-~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIW-SYGHRNP-QGIDWHRASGVMVATE 215 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEE-EECCSCC-CEEEECTTTCCEEEEE
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEE-EEccCCc-ceEEEeCCCCCEEEEe
Confidence 543 245555555432 0121 1234443 5699999 56666554
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.20 E-value=1.8 Score=40.27 Aligned_cols=39 Identities=10% Similarity=0.150 Sum_probs=33.6
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEe
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK 57 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 57 (277)
..+.++...++..++++-+.|+++|+|++.++.++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 356778888888999999999999999999999887653
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.70 E-value=3.8 Score=35.54 Aligned_cols=73 Identities=8% Similarity=0.144 Sum_probs=51.5
Q ss_pred CccEEEEEEcCCCCEEEEEe-CCCcEEEEECCCC------ce-------eEEeecccCceeEEEEecCCCEEEEEeCCCc
Q 023772 60 GREVRDVHVTADNSKLISCG-GDRQIFYWDVSTG------RV-------IRKFRGHESEVNAVKFNEYSSVVVSAGYDQS 125 (277)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~s-~d~~v~~wd~~~~------~~-------~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~ 125 (277)
......+.++|+|++++.++ .+.++.++|.+.- +. ......-.++.. .+|.++++...|--.|.+
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlH-t~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLH-TTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEE-EEECSSSEEEEEETTTTE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccE-EEECCCCceEeeeeecce
Confidence 34567889999999987765 5889999998731 11 223333334444 789999955566668999
Q ss_pred EEEEeCcc
Q 023772 126 LRAWDCRS 133 (277)
Q Consensus 126 i~iwd~~~ 133 (277)
|..|++..
T Consensus 401 vvkWni~~ 408 (638)
T 3sbq_A 401 VVKWNMEE 408 (638)
T ss_dssp EEEEEHHH
T ss_pred EEEEeccH
Confidence 99999854
No 347
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.43 E-value=2 Score=40.89 Aligned_cols=38 Identities=11% Similarity=0.150 Sum_probs=31.8
Q ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEe
Q 023772 20 AVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK 57 (277)
Q Consensus 20 ~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 57 (277)
.+.++...++..++++-+.|+++||||+.++.++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667788999999999999999999999887754
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=78.43 E-value=19 Score=31.37 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=64.7
Q ss_pred CCe-EEEeecCCcEEEEEccCCccc--------------ccCCCCCeeEEEEeCCCCEEEEEecCCeEEEEECCCC----
Q 023772 156 KTE-IIGGSVDGTVRTFDIRVGREL--------------SDDLGQPVNCISMSNDGNCILASCLDSTLRLLDRSTG---- 216 (277)
Q Consensus 156 ~~~-~~~g~~d~~i~i~d~~~~~~~--------------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~---- 216 (277)
+.+ ++.|-.+.++.++|++..... ....+.-....+|+++|..+.+-.-|..|.-||+...
T Consensus 334 Gkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~ 413 (638)
T 3sbq_A 334 GKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAY 413 (638)
T ss_dssp SCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHh
Confidence 344 456667889999999753221 0112445678899999966666678999999998643
Q ss_pred ------ceEEEEeccccceeeee---eEecCCCceEEee---cCCCeE----------EEEECcC
Q 023772 217 ------ELLQEYKGHICKSFKTD---CCLTNSDAHVTGG---SEDGYI----------YFWDLVD 259 (277)
Q Consensus 217 ------~~~~~~~~~~~~~~~~~---~~~~~~~~~l~sg---s~d~~i----------~iwd~~~ 259 (277)
..++.+.-|-....... -...++|++|++. |.|+.+ .+.|+.-
T Consensus 414 ~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 414 KGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp TTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred cCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 35555554432211100 0124678888875 566655 6777754
No 349
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.35 E-value=4.2 Score=36.34 Aligned_cols=38 Identities=13% Similarity=0.356 Sum_probs=30.7
Q ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEcCCCCeeEEEEec
Q 023772 19 GAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKS 58 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 58 (277)
..|.++.+. ..++++-+.|+++|+||+.++.++.+..-
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 346665553 67999999999999999999998877654
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=76.13 E-value=3 Score=39.68 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=31.6
Q ss_pred CeeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEe
Q 023772 186 PVNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYK 223 (277)
Q Consensus 186 ~v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 223 (277)
.+.+++..++..++++-+.|+++|+||+.+++++.++.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455667788999999999999999999999887754
No 351
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.57 E-value=5.9 Score=35.41 Aligned_cols=36 Identities=17% Similarity=0.388 Sum_probs=29.6
Q ss_pred eeEEEEeCCCCEEEEEecCCeEEEEECCCCceEEEEec
Q 023772 187 VNCISMSNDGNCILASCLDSTLRLLDRSTGELLQEYKG 224 (277)
Q Consensus 187 v~~~~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 224 (277)
|.++.+ +..++++-+.|..+|+||+++++++.+..-
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555444 477999999999999999999998887654
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=67.43 E-value=56 Score=27.53 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=59.6
Q ss_pred cEEEEEEeCCCC-EEEEEeCCCcEEEEcCCCC---eeEEEEec---------cCccEEEEEEcCC---CCEEEEE-eC--
Q 023772 20 AVLAARFNGDGN-YCLSCGKDRTIRLWNPHRG---IHIKTYKS---------HGREVRDVHVTAD---NSKLISC-GG-- 80 (277)
Q Consensus 20 ~V~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~---~~~~~~~~---------h~~~v~~~~~~~~---~~~l~t~-s~-- 80 (277)
.-..++|.|+|+ .++.+...|.|++++.... ..+..+.. .......++++|+ +.+|+.. +.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 346899999996 3444567899999975322 11222210 1346788999986 3344332 21
Q ss_pred C----------CcEEEEECCC----------CceeEEee--cccCceeEEEEecCCCEEEEEeCCC
Q 023772 81 D----------RQIFYWDVST----------GRVIRKFR--GHESEVNAVKFNEYSSVVVSAGYDQ 124 (277)
Q Consensus 81 d----------~~v~~wd~~~----------~~~~~~~~--~h~~~v~~i~~~~~~~~l~s~~~d~ 124 (277)
+ ..|.-|.+.. .+.+..+. .....-..|.|.||+.+.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1344465532 12333332 1122357899999999888776543
No 353
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=62.01 E-value=70 Score=26.78 Aligned_cols=101 Identities=8% Similarity=0.081 Sum_probs=55.3
Q ss_pred CceeEEEEecCCCEEEEEeCCCcEEEEeCccCCCcceEeecc------ccCcEEEEEecC-----CeEEEeec-------
Q 023772 103 SEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDS------FQDSVMSVCLTK-----TEIIGGSV------- 164 (277)
Q Consensus 103 ~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~~g~~------- 164 (277)
..-++|+|.|+++++++-...+.|++++........+..+.. .+.....+.+++ ..+.....
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 345689999999988875544568888754332222222211 234556677775 23333221
Q ss_pred ------CCcEEEEEccCC-------ccccc----CCCCCeeEEEEeCCCCEEEEEe
Q 023772 165 ------DGTVRTFDIRVG-------RELSD----DLGQPVNCISMSNDGNCILASC 203 (277)
Q Consensus 165 ------d~~i~i~d~~~~-------~~~~~----~~~~~v~~~~~s~~~~~l~~~~ 203 (277)
...|.-|++... +.+.. ...+....|.|.|+|.++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 123444554321 11111 1235678899999998777654
No 354
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=59.50 E-value=56 Score=28.60 Aligned_cols=58 Identities=17% Similarity=0.205 Sum_probs=41.2
Q ss_pred EEEEEEeCCCCEEEEEeCC------------CcEEEEcCCCCeeEEEEecc-CccEEEEEEcCCCCEEEEE
Q 023772 21 VLAARFNGDGNYCLSCGKD------------RTIRLWNPHRGIHIKTYKSH-GREVRDVHVTADNSKLISC 78 (277)
Q Consensus 21 V~~~~~~~~~~~l~s~s~d------------~~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~t~ 78 (277)
.-.|.|++.|.+++.-..+ ..+.+.+..+++..+.+..+ ...++.++|+|+++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4679999999977654322 23555677778776666654 3579999999999887654
No 355
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.38 E-value=84 Score=27.43 Aligned_cols=60 Identities=15% Similarity=0.192 Sum_probs=42.3
Q ss_pred CcEEEEEEeCCCCEEEEEeC------------CCcEEEEcCCCCeeEEEEecc-CccEEEEEEcCCCCEEEEE
Q 023772 19 GAVLAARFNGDGNYCLSCGK------------DRTIRLWNPHRGIHIKTYKSH-GREVRDVHVTADNSKLISC 78 (277)
Q Consensus 19 ~~V~~~~~~~~~~~l~s~s~------------d~~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~t~ 78 (277)
+....|.|+++|.+.+.... ...+..++..+++....+... ...++.++|+|+++.|+.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 45678999999998773221 114566677778766655543 3578999999999988765
No 356
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=53.26 E-value=87 Score=25.18 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=50.1
Q ss_pred EEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce--eEEe----ecccCceeEEEEecC----CCEEEEE--e
Q 023772 54 KTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWDVSTGRV--IRKF----RGHESEVNAVKFNEY----SSVVVSA--G 121 (277)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd~~~~~~--~~~~----~~h~~~v~~i~~~~~----~~~l~s~--~ 121 (277)
..+...-...+.++|.|++..+++--..|.|++++..+++. +..+ .........|+++|+ +.+.++- .
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 34444445778999999998877765589999998765543 2211 123456789999985 3343332 2
Q ss_pred CCCcEEEEeCcc
Q 023772 122 YDQSLRAWDCRS 133 (277)
Q Consensus 122 ~d~~i~iwd~~~ 133 (277)
.++.|.-|....
T Consensus 105 ~~~~v~R~~~~~ 116 (347)
T 3das_A 105 SDNRIVRMLYDE 116 (347)
T ss_dssp SSEEEEEEEBCT
T ss_pred CCCEEEEEEeCC
Confidence 345565565543
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=44.63 E-value=1.1e+02 Score=26.82 Aligned_cols=58 Identities=21% Similarity=0.283 Sum_probs=40.1
Q ss_pred EEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCceeEEeecc-cCceeEEEEecCCCEEEEE
Q 023772 63 VRDVHVTADNSKLISCGGD------------RQIFYWDVSTGRVIRKFRGH-ESEVNAVKFNEYSSVVVSA 120 (277)
Q Consensus 63 v~~~~~~~~~~~l~t~s~d------------~~v~~wd~~~~~~~~~~~~h-~~~v~~i~~~~~~~~l~s~ 120 (277)
.-.|+|++.+.+++.-..+ ..+.+.+..++++.+-+... .++++.+.|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999999877654322 23455566677766655544 5799999999998877653
No 358
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=44.58 E-value=1.2e+02 Score=24.20 Aligned_cols=44 Identities=20% Similarity=0.269 Sum_probs=25.6
Q ss_pred EEEeecCCcEEEEEccCCccc-----ccCCCCCeeEEEEeCCCCEEEEE
Q 023772 159 IIGGSVDGTVRTFDIRVGREL-----SDDLGQPVNCISMSNDGNCILAS 202 (277)
Q Consensus 159 ~~~g~~d~~i~i~d~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~ 202 (277)
+++....+.|...++..++.. .......+..+++.|+|..+++.
T Consensus 292 ~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 292 FIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred EEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 444444566666666543211 11223478889999999866654
No 359
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=43.41 E-value=1.2e+02 Score=23.75 Aligned_cols=209 Identities=6% Similarity=-0.018 Sum_probs=99.3
Q ss_pred CCCCEEEEEe-C-CCcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEeC--------------CCcEEEEECCC
Q 023772 28 GDGNYCLSCG-K-DRTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCGG--------------DRQIFYWDVST 91 (277)
Q Consensus 28 ~~~~~l~s~s-~-d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~--------------d~~v~~wd~~~ 91 (277)
.+|.+|+-.. . ++.|...+.. |.....+.. .. +--+++++++|+=+.. ...|+..+++.
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETT-SCSCEEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCC-CCCCEEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 4566666443 2 3444444432 222333321 12 3345678888765543 24677777776
Q ss_pred CceeEEeecccCceeEEEEecCCCEEEEEe--CCCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEE-EeecCCcE
Q 023772 92 GRVIRKFRGHESEVNAVKFNEYSSVVVSAG--YDQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEII-GGSVDGTV 168 (277)
Q Consensus 92 ~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~d~~i 168 (277)
++... +.. .. +..++++++.|+-.. .++.-.||-+.........+... .. ..+.+.+..+. +......|
T Consensus 98 ~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~-~~--~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 98 HGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH-YL--FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp CCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS-CC--CCSEEETTEEEEECTTTCCE
T ss_pred CcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC-Cc--eEeeEECCEEEEEeCCCceE
Confidence 65322 221 11 235667788877765 34455555443322222222222 11 23455555554 33335567
Q ss_pred EEEEccCCcccccCCCCCeeEEEEeCCCCEEEEEecC--CeEEEEECCCCceEEEEeccccceeeeeeEecCCCceEEee
Q 023772 169 RTFDIRVGRELSDDLGQPVNCISMSNDGNCILASCLD--STLRLLDRSTGELLQEYKGHICKSFKTDCCLTNSDAHVTGG 246 (277)
Q Consensus 169 ~i~d~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 246 (277)
..-++..+..... ...... ..++|++.+|+-...+ ..|..-++.... .+.+.... . ..+.|++.+|.-+
T Consensus 170 y~~~l~g~~~~~l-~~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~~~--~----~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 170 YRYDTASQSEALF-YDCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTEAN--I----EHYNVYGSLIFYQ 240 (302)
T ss_dssp EEEETTTTEEEEE-ECSCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSCSC--E----EEEEEETTEEEEE
T ss_pred EEEECCCCCEEEE-eCCCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeCCC--c----ceEEECCCEEEEE
Confidence 7777654432111 122222 3466888887766543 356566665433 22332211 1 2245556655532
Q ss_pred --cCCCeEEEEECc
Q 023772 247 --SEDGYIYFWDLV 258 (277)
Q Consensus 247 --s~d~~i~iwd~~ 258 (277)
...+.|+.-++.
T Consensus 241 ~~~~~~~i~~~~~D 254 (302)
T 3s25_A 241 RGGDNPALCVVKND 254 (302)
T ss_dssp ECSSSCEEEEEETT
T ss_pred ECCCCcEEEEEECC
Confidence 223455555554
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=38.85 E-value=1.9e+02 Score=25.33 Aligned_cols=59 Identities=19% Similarity=0.259 Sum_probs=41.3
Q ss_pred cEEEEEEcCCCCEEEEEeC------------CCcEEEEECCCCceeEEeec-ccCceeEEEEecCCCEEEEE
Q 023772 62 EVRDVHVTADNSKLISCGG------------DRQIFYWDVSTGRVIRKFRG-HESEVNAVKFNEYSSVVVSA 120 (277)
Q Consensus 62 ~v~~~~~~~~~~~l~t~s~------------d~~v~~wd~~~~~~~~~~~~-h~~~v~~i~~~~~~~~l~s~ 120 (277)
....+.|.+++.+.+.... ...+..++..++++.+-+.. ...+++.++|+||++.|+.+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4678999999988773321 12566677777776555543 24678999999999887765
No 361
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=28.54 E-value=3.2e+02 Score=24.45 Aligned_cols=193 Identities=11% Similarity=0.081 Sum_probs=93.5
Q ss_pred EEEE-EeCCCCEEEEE-----eCCCcEEEEcCCCCeeEE-EEe-ccCc------cEEEEEEcCCCCEEEEE---------
Q 023772 22 LAAR-FNGDGNYCLSC-----GKDRTIRLWNPHRGIHIK-TYK-SHGR------EVRDVHVTADNSKLISC--------- 78 (277)
Q Consensus 22 ~~~~-~~~~~~~l~s~-----s~d~~v~iwd~~~~~~~~-~~~-~h~~------~v~~~~~~~~~~~l~t~--------- 78 (277)
..+. ++|++++++-+ +.-..+|++|+.+++.+. .|. .... .-..++|..++..+++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 3455 88999887732 333578999999987652 122 0000 01234676444444432
Q ss_pred -eCCCcEEEEECCCCc--eeEEeecccCce-eEEEEecCCC-----EEEEEeCC---CcEEEEeCccCCCcceEeecccc
Q 023772 79 -GGDRQIFYWDVSTGR--VIRKFRGHESEV-NAVKFNEYSS-----VVVSAGYD---QSLRAWDCRSHSTEPIQIIDSFQ 146 (277)
Q Consensus 79 -s~d~~v~~wd~~~~~--~~~~~~~h~~~v-~~i~~~~~~~-----~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~ 146 (277)
+.-.+|+.|.+-+.. -...|......+ .+....+++. .+++.+.+ ..+.+.+......+... +....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK-INMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE-CCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE-eecCC
Confidence 112568899876542 222343333333 2344455554 35554433 23444454322221111 11111
Q ss_pred CcEEEEEecCCe-EEEe----------ecCCcEEEEEccCCc-------c----cccCCCCCeeEEEEeCCCCEEEEEec
Q 023772 147 DSVMSVCLTKTE-IIGG----------SVDGTVRTFDIRVGR-------E----LSDDLGQPVNCISMSNDGNCILASCL 204 (277)
Q Consensus 147 ~~~~~~~~~~~~-~~~g----------~~d~~i~i~d~~~~~-------~----~~~~~~~~v~~~~~s~~~~~l~~~~~ 204 (277)
.... +...... ++.. .-.+.|...|+.... . +.......+..+.+..+ ..+++...
T Consensus 291 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~ 368 (711)
T 4hvt_A 291 DATL-QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYD 368 (711)
T ss_dssp TCEE-EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEE
T ss_pred cceE-eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEE
Confidence 1111 1111222 2211 235678888886531 1 11122345677788765 46666677
Q ss_pred CCe--EEEEECCCCc
Q 023772 205 DST--LRLLDRSTGE 217 (277)
Q Consensus 205 d~~--i~~wd~~~~~ 217 (277)
++. ++++|+.+++
T Consensus 369 ~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 369 NVVAKVVTFTLENEQ 383 (711)
T ss_dssp TTEEEEEEECEETTE
T ss_pred CCEEEEEEEECCCCc
Confidence 764 6677766554
No 362
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.77 E-value=2.7e+02 Score=23.62 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=0.0
Q ss_pred EEEeecCCcEEEEEccCCcc------------cccCCCCCeeEEEEeCCCCEEEEEecCCeEEE
Q 023772 159 IIGGSVDGTVRTFDIRVGRE------------LSDDLGQPVNCISMSNDGNCILASCLDSTLRL 210 (277)
Q Consensus 159 ~~~g~~d~~i~i~d~~~~~~------------~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~ 210 (277)
+..|+.+|.|.-.-+..... .....+.+|..|.++++..+|..++.++-+++
T Consensus 424 ~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 424 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
No 363
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=24.60 E-value=3.1e+02 Score=22.95 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=34.2
Q ss_pred ccEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCc---eeEEee---------cccCceeEEEEecC
Q 023772 61 REVRDVHVTADNS-KLISCGGDRQIFYWDVSTGR---VIRKFR---------GHESEVNAVKFNEY 113 (277)
Q Consensus 61 ~~v~~~~~~~~~~-~l~t~s~d~~v~~wd~~~~~---~~~~~~---------~h~~~v~~i~~~~~ 113 (277)
...+.|+|.|++. +++.+...|.|++++..... .+..+. ........|+++|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4568999999986 55556788999999754321 222211 01345677888875
No 364
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=23.15 E-value=2.7e+02 Score=21.64 Aligned_cols=174 Identities=11% Similarity=0.083 Sum_probs=87.8
Q ss_pred EEEeCCCCEEEEEeCC--------------CcEEEEcCCCCeeEEEEeccCccEEEEEEcCCCCEEEEEe----CCCcEE
Q 023772 24 ARFNGDGNYCLSCGKD--------------RTIRLWNPHRGIHIKTYKSHGREVRDVHVTADNSKLISCG----GDRQIF 85 (277)
Q Consensus 24 ~~~~~~~~~l~s~s~d--------------~~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s----~d~~v~ 85 (277)
-.++++|++|+-+... ..|+..++..++... +.. ... ..+++++++|+=.. ....|.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--DPC--IYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--SCE--EEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--CCc--cEEEEeCCEEEEEeecCCCCceEE
Confidence 4467889988866542 456666766554322 221 222 35677888877554 334566
Q ss_pred EEECCCCceeEEeecccCceeEEEEecCCCEEEEEeC-CCcEEEEeCccCCCcceEeeccccCcEEEEEecCCeEEEeec
Q 023772 86 YWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVVSAGY-DQSLRAWDCRSHSTEPIQIIDSFQDSVMSVCLTKTEIIGGSV 164 (277)
Q Consensus 86 ~wd~~~~~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 164 (277)
.-++.... ...+..+.. ..+.++++.|+-.+. ..+|..-++..... ..+.... ....+.+....++-...
T Consensus 133 ~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~--~~l~~~~--~~~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 133 RIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE--ALFYDCN--CYKPVVLDDTNVYYMDV 203 (302)
T ss_dssp EEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE--EEEECSC--EEEEEEEETTEEEEEEG
T ss_pred EEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE--EEEeCCC--ccceeeecCCEEEEEEc
Confidence 66665433 333443432 345677777776554 56677766654322 2222211 11123334444433222
Q ss_pred C--CcEEEEEccCCcccccCCCCCeeEEEEeCCCCEEEEEe--cCCeEEEEECC
Q 023772 165 D--GTVRTFDIRVGRELSDDLGQPVNCISMSNDGNCILASC--LDSTLRLLDRS 214 (277)
Q Consensus 165 d--~~i~i~d~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~~wd~~ 214 (277)
. ..|..-++...... ......+ ..|+|++.+|.-+. ..+.|..-++.
T Consensus 204 ~~~~~I~~~~ldG~~~~-~Lt~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 204 NRDNAIVHVNINNPNPV-VLTEANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp GGTTEEEEECSSSCCCE-ECSCSCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred CCCcEEEEEECCCCCeE-EEeCCCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 2 23444444332211 1122233 34788888886553 23566666664
No 365
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=23.01 E-value=25 Score=29.12 Aligned_cols=19 Identities=26% Similarity=0.690 Sum_probs=13.5
Q ss_pred eecCCCeEEEEECcCccce
Q 023772 245 GGSEDGYIYFWDLVDASVV 263 (277)
Q Consensus 245 sgs~d~~i~iwd~~~~~~~ 263 (277)
.+..+|.||+||+.+.+++
T Consensus 162 ~~~~~GVVrvWDVkd~slL 180 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELL 180 (577)
T ss_dssp ----CCEECSEECSCGGGG
T ss_pred CCCCCCeEEEEecCCHHHH
Confidence 4667999999999998765
No 366
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=21.04 E-value=1.7e+02 Score=18.53 Aligned_cols=24 Identities=8% Similarity=0.214 Sum_probs=13.2
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECC
Q 023772 65 DVHVTADNSKLISCGGDRQIFYWDVS 90 (277)
Q Consensus 65 ~~~~~~~~~~l~t~s~d~~v~~wd~~ 90 (277)
.+.+..+|++++... ++. .+|...
T Consensus 54 ~L~l~~dGnLvL~d~-~~~-~vWss~ 77 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDS-SGR-SLWASH 77 (105)
T ss_dssp EEEECTTSCEEEECT-TCC-EEEECC
T ss_pred EEEEeCCccEEEECC-CcE-EEEEec
Confidence 466777777666533 222 467554
No 367
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=20.64 E-value=3.2e+02 Score=21.60 Aligned_cols=154 Identities=9% Similarity=0.116 Sum_probs=90.1
Q ss_pred CcEEEEE-EeC--CCCEEEEEeCCCcEEEEcCCC-------CeeEEEEeccCccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 023772 19 GAVLAAR-FNG--DGNYCLSCGKDRTIRLWNPHR-------GIHIKTYKSHGREVRDVHVTADNSKLISCGGDRQIFYWD 88 (277)
Q Consensus 19 ~~V~~~~-~~~--~~~~l~s~s~d~~v~iwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~d~~v~~wd 88 (277)
..|..+. ..+ +..+++.++.+|.++.-.+.. |.....++.. ..+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 4455543 332 578999999999999986533 2222234443 3455555555567888888999988887
Q ss_pred CC--CC---------ceeEEeecccCceeEEEEecCCCEEEEEeCCCcEEEEeCccCCC-----cceEeec--cccCcEE
Q 023772 89 VS--TG---------RVIRKFRGHESEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHST-----EPIQIID--SFQDSVM 150 (277)
Q Consensus 89 ~~--~~---------~~~~~~~~h~~~v~~i~~~~~~~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~--~~~~~~~ 150 (277)
+. .- .....+. ....|.++...+.+..++..+..|.++.-.+..... ..+..+. ...+.+.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv 252 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLV 252 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEE
T ss_pred CcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEE
Confidence 76 21 1111222 245576666666667888899999999887643211 1122111 1122333
Q ss_pred EEEe-c-CCeEEEeecCCcEEEEEcc
Q 023772 151 SVCL-T-KTEIIGGSVDGTVRTFDIR 174 (277)
Q Consensus 151 ~~~~-~-~~~~~~g~~d~~i~i~d~~ 174 (277)
.+.. . ...++..+.+|.+..++..
T Consensus 253 ~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 253 GALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEeCCCccEEEEcCCCeEEEEehh
Confidence 3332 2 3457777777777777654
Done!