Query 023774
Match_columns 277
No_of_seqs 95 out of 97
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 12:35:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023774.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023774hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1m7ja2 b.92.1.6 (A:420-480) N 24.4 30 0.0022 22.7 3.2 40 14-59 7-46 (61)
2 d1mhhe_ d.15.7.1 (E:) Immunogl 7.3 30 0.0022 23.5 -0.8 16 247-262 7-22 (63)
3 d1efaa1 a.35.1.5 (A:2-60) Lac 7.1 79 0.0058 20.7 1.3 17 133-149 1-17 (59)
4 d1hz6a_ d.15.7.1 (A:) Immunogl 7.1 32 0.0023 23.7 -0.8 17 246-262 11-27 (67)
5 d1a6qa1 a.159.1.1 (A:297-368) 6.7 59 0.0043 22.6 0.5 6 266-271 49-54 (72)
6 d1gjja2 a.140.1.1 (A:111-153) 6.0 69 0.005 20.2 0.4 18 201-218 23-40 (43)
7 d1icaa_ g.3.7.4 (A:) Defensin 5.0 87 0.0063 19.6 0.5 9 14-22 2-10 (40)
8 d1oj4a2 d.58.26.5 (A:164-283) 4.4 82 0.006 22.5 -0.0 11 10-20 14-24 (120)
9 d2dsma1 d.372.1.1 (A:1-64) Hyp 4.3 1.3E+02 0.0095 20.4 1.0 13 215-227 22-34 (64)
10 d1t6sa1 a.4.5.60 (A:1-85) Segr 4.0 1.7E+02 0.012 19.7 1.5 17 233-249 20-36 (85)
No 1
>d1m7ja2 b.92.1.6 (A:420-480) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]}
Probab=24.41 E-value=30 Score=22.66 Aligned_cols=40 Identities=28% Similarity=0.365 Sum_probs=27.9
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCcceEEeCcccchH
Q 023774 14 TADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDE 59 (277)
Q Consensus 14 t~dll~w~~~~~~~~~~~~~~~R~~~~~Qp~~giS~i~Fg~qvT~E 59 (277)
-|||.-|...--.+ ...-.++ +|++.||..|.-.|++..+
T Consensus 7 ~ADlvvfDp~~i~d---~~~~~~~---~~~~~Gi~~v~VnG~~v~~ 46 (61)
T d1m7ja2 7 YADLVVFDPATVAD---SATFEHP---TERAAGIHSVYVNGAAVWE 46 (61)
T ss_dssp BCCEEEECTTTCBC---CCCSSST---TCCCBSEEEEEETTEEEEE
T ss_pred CCCEEEECHHHccC---ccccccc---ccccceeEEEEECCEEEEE
Confidence 58888884322112 2344577 9999999999999988664
No 2
>d1mhhe_ d.15.7.1 (E:) Immunoglobulin light chain-binding domain of protein L {Peptostreptococcus magnus [TaxId: 1260]}
Probab=7.35 E-value=30 Score=23.54 Aligned_cols=16 Identities=44% Similarity=0.912 Sum_probs=11.8
Q ss_pred CCcCCCCCcCccccCC
Q 023774 247 SNIFADGKVESRDYLG 262 (277)
Q Consensus 247 ~dIFadgk~~~rd~~g 262 (277)
|-|||||+.+.-.+-|
T Consensus 7 NlifadG~tQtAeFkG 22 (63)
T d1mhhe_ 7 NLIFADGKIQTAEFKG 22 (63)
T ss_dssp EEECTTSCEEEEEEEE
T ss_pred EEEEcCCcEEEEEEee
Confidence 5599999988765543
No 3
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=7.09 E-value=79 Score=20.73 Aligned_cols=17 Identities=41% Similarity=0.409 Sum_probs=13.8
Q ss_pred CCCCchHHHhhhccCCC
Q 023774 133 KPTTLPEVAKQRELSGT 149 (277)
Q Consensus 133 Kp~s~~evAkqrelsgt 149 (277)
|++++.+||+..|.|..
T Consensus 1 k~~Ti~diA~~agvS~s 17 (59)
T d1efaa1 1 KPVTLYDVAEYAGVSYQ 17 (59)
T ss_dssp CCCCHHHHHHTTTSCHH
T ss_pred CCCCHHHHHHHHCCCHH
Confidence 67899999998887643
No 4
>d1hz6a_ d.15.7.1 (A:) Immunoglobulin light chain-binding domain of protein L {Peptostreptococcus magnus [TaxId: 1260]}
Probab=7.07 E-value=32 Score=23.66 Aligned_cols=17 Identities=29% Similarity=0.698 Sum_probs=12.3
Q ss_pred CCCcCCCCCcCccccCC
Q 023774 246 GSNIFADGKVESRDYLG 262 (277)
Q Consensus 246 G~dIFadgk~~~rd~~g 262 (277)
-|-|||||+.+.-.+-|
T Consensus 11 ~NlifadG~tQtAeFKG 27 (67)
T d1hz6a_ 11 ANLIFANGSTQTAEFKG 27 (67)
T ss_dssp EEEECTTSCEEEEEEEE
T ss_pred EEEEEcCCcEEEEEEee
Confidence 35699999988765543
No 5
>d1a6qa1 a.159.1.1 (A:297-368) Protein serine/threonine phosphatase 2C, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.66 E-value=59 Score=22.56 Aligned_cols=6 Identities=83% Similarity=1.658 Sum_probs=3.7
Q ss_pred cCCCCC
Q 023774 266 KPPGGE 271 (277)
Q Consensus 266 kppgg~ 271 (277)
=||||+
T Consensus 49 LPPGGG 54 (72)
T d1a6qa1 49 LPPGGE 54 (72)
T ss_dssp CCTTTG
T ss_pred CCCCcc
Confidence 367765
No 6
>d1gjja2 a.140.1.1 (A:111-153) Thymopoietin, LAP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.97 E-value=69 Score=20.21 Aligned_cols=18 Identities=39% Similarity=0.846 Sum_probs=15.6
Q ss_pred cchhhhhhhhhhhhhccc
Q 023774 201 PVMKTSKKIYDKKFSELS 218 (277)
Q Consensus 201 ~~~kt~Kki~~~K~~Els 218 (277)
|++.+.+++.-+|+++|.
T Consensus 23 PIt~sTR~vy~kkL~~l~ 40 (43)
T d1gjja2 23 PIVGTTRKLYEKKLLKLR 40 (43)
T ss_dssp CCCSSEHHHHHHHEHHHH
T ss_pred CcCcchHHHHHHHHHHHH
Confidence 778889999999998864
No 7
>d1icaa_ g.3.7.4 (A:) Defensin A {Flesh fly (Phormia terranovae) [TaxId: 34676]}
Probab=5.01 E-value=87 Score=19.61 Aligned_cols=9 Identities=44% Similarity=0.423 Sum_probs=6.6
Q ss_pred ccccccccC
Q 023774 14 TADLLVWSE 22 (277)
Q Consensus 14 t~dll~w~~ 22 (277)
|-|||+|--
T Consensus 2 TCDllS~~~ 10 (40)
T d1icaa_ 2 TCDLLSGTG 10 (40)
T ss_dssp CCSCSSTTS
T ss_pred ceeecccCC
Confidence 678888754
No 8
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=4.35 E-value=82 Score=22.52 Aligned_cols=11 Identities=9% Similarity=-0.130 Sum_probs=7.8
Q ss_pred CCCCccccccc
Q 023774 10 PHTSTADLLVW 20 (277)
Q Consensus 10 ~h~st~dll~w 20 (277)
-|.||++....
T Consensus 14 ~~vST~~if~~ 24 (120)
T d1oj4a2 14 VSIPTPVIFKD 24 (120)
T ss_dssp CCCCHHHHHTC
T ss_pred CCcChHHHHhC
Confidence 46788888764
No 9
>d2dsma1 d.372.1.1 (A:1-64) Hypothetical protein YqaI {Bacillus subtilis [TaxId: 1423]}
Probab=4.27 E-value=1.3e+02 Score=20.40 Aligned_cols=13 Identities=15% Similarity=0.291 Sum_probs=10.8
Q ss_pred hcccCCCCCCCCC
Q 023774 215 SELSGNDIFKGDV 227 (277)
Q Consensus 215 ~ElsGn~IFk~d~ 227 (277)
.+++|++||-+|.
T Consensus 22 ~D~~Gsev~p~Dd 34 (64)
T d2dsma1 22 IDFYGDEVTPVDD 34 (64)
T ss_dssp CCTTSSCBCTTSC
T ss_pred HHhhccccccCCc
Confidence 4679999999884
No 10
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=4.05 E-value=1.7e+02 Score=19.65 Aligned_cols=17 Identities=18% Similarity=0.557 Sum_probs=13.0
Q ss_pred CCCChhhhhhhccCCCc
Q 023774 233 EKPLSVAKLREMSGSNI 249 (277)
Q Consensus 233 ek~ls~Akl~emsG~dI 249 (277)
++|||..+|.++.|.+|
T Consensus 20 ~~Pls~~~L~~~l~~~~ 36 (85)
T d1t6sa1 20 EEPVNLQTLSQITAHKF 36 (85)
T ss_dssp SSCBCHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHHHccCC
Confidence 57888888888877543
Done!