Your job contains 1 sequence.
>023776
MEIIAGTTATTMATQSITPKGLKFDPPFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIA
DDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYY
YFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSAN
LALLRHGISLWIDVPPGMVARMDHSGFPESELFALYKEMRDGYATADVTVSLQKVASQLG
YDDLDAVTTEDMTLEVLKEIEKLTRKKKMMEEAARPF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023776
(277 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088469 - symbol:SKL1 "shikimate kinase-like 1... 720 3.7e-71 1
TAIR|locus:2052586 - symbol:SK1 "shikimate kinase 1" spec... 244 1.6e-28 2
UNIPROTKB|Q5NTH3 - symbol:SK2 "Shikimate kinase 2, chloro... 260 2.1e-22 1
UNIPROTKB|Q7X7H9 - symbol:SK3 "Shikimate kinase 3, chloro... 258 3.4e-22 1
UNIPROTKB|Q5NTH4 - symbol:SK1 "Shikimate kinase 1, chloro... 247 4.9e-21 1
TIGR_CMR|GSU_2026 - symbol:GSU_2026 "shikimate kinase" sp... 136 6.5e-09 1
TIGR_CMR|SPO_1634 - symbol:SPO_1634 "shikimate kinase" sp... 138 2.7e-08 1
TIGR_CMR|SO_0286 - symbol:SO_0286 "shikimate kinase" spec... 126 8.9e-08 1
UNIPROTKB|Q9KNV1 - symbol:aroK "Shikimate kinase" species... 126 2.7e-07 1
TIGR_CMR|VC_2629 - symbol:VC_2629 "shikimate kinase" spec... 126 2.7e-07 1
TIGR_CMR|CPS_0472 - symbol:CPS_0472 "shikimate kinase" sp... 121 2.2e-06 1
TIGR_CMR|CBU_1892 - symbol:CBU_1892 "shikimate kinase" sp... 120 6.7e-06 1
UNIPROTKB|P0A6D7 - symbol:aroK "shikimate kinase I" speci... 115 2.6e-05 1
TIGR_CMR|CHY_0629 - symbol:CHY_0629 "shikimate kinase/3-d... 126 3.2e-05 1
TAIR|locus:2062486 - symbol:SKL2 "shikimate kinase-like 2... 124 3.2e-05 1
TIGR_CMR|DET_0464 - symbol:DET_0464 "shikimate kinase" sp... 112 7.8e-05 1
MGI|MGI:2139347 - symbol:Thnsl1 "threonine synthase-like ... 115 0.00089 1
>TAIR|locus:2088469 [details] [associations]
symbol:SKL1 "shikimate kinase-like 1" species:3702
"Arabidopsis thaliana" [GO:0004765 "shikimate kinase activity"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009073 "aromatic
amino acid family biosynthetic process" evidence=RCA;TAS]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009658
"chloroplast organization" evidence=IMP] [GO:0010027 "thylakoid
membrane organization" evidence=IMP] [GO:0000096 "sulfur amino acid
metabolic process" evidence=RCA] [GO:0006520 "cellular amino acid
metabolic process" evidence=RCA] [GO:0006546 "glycine catabolic
process" evidence=RCA] [GO:0006569 "tryptophan catabolic process"
evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
process" evidence=RCA] [GO:0006733 "oxidoreduction coenzyme
metabolic process" evidence=RCA] [GO:0006766 "vitamin metabolic
process" evidence=RCA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=RCA] [GO:0009072 "aromatic amino
acid family metabolic process" evidence=RCA] [GO:0009106 "lipoate
metabolic process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic
process" evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019344 "cysteine
biosynthetic process" evidence=RCA] [GO:0019748 "secondary
metabolic process" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0044272 "sulfur compound biosynthetic process"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009658 GO:GO:0010027 GO:GO:0016301 EMBL:AB016889
PRINTS:PR01100 PROSITE:PS01128 eggNOG:COG0703 EMBL:AK318791
EMBL:BT012132 EMBL:BT012407 IPI:IPI00542597 RefSeq:NP_001118711.1
RefSeq:NP_001118712.1 RefSeq:NP_189325.2 UniGene:At.37144
ProteinModelPortal:Q9LW20 SMR:Q9LW20 IntAct:Q9LW20 STRING:Q9LW20
PaxDb:Q9LW20 PRIDE:Q9LW20 EnsemblPlants:AT3G26900.1
EnsemblPlants:AT3G26900.2 EnsemblPlants:AT3G26900.3 GeneID:822306
KEGG:ath:AT3G26900 TAIR:At3g26900 HOGENOM:HOG000077619
InParanoid:Q9LW20 OMA:IWIDVPL PhylomeDB:Q9LW20
ProtClustDB:CLSN2680173 Genevestigator:Q9LW20 Uniprot:Q9LW20
Length = 280
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 149/248 (60%), Positives = 192/248 (77%)
Query: 38 PIRTSLQYSIISRKPRIT-TRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSV 96
P+ +S +IS RI +RS+AD + S ++ V DP VK+KA DI+ ELKG S+
Sbjct: 34 PLLSSSSTRLISCHSRIAPSRSLADQSASTGIS-VVDSDPIDVVKRKAMDIAPELKGASI 92
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEV 156
FLVG+NN+IKT+ GK LA+ALRYYYFDSD+L+ EAAGG +A+A +E+DEK +Q++ETEV
Sbjct: 93 FLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQESETEV 152
Query: 157 LKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMVARMDHSGF---PESELF 213
LKQLSSMGRLVVCAG+GAVQS NLALLRHGIS+WIDVP + A+ D F P ELF
Sbjct: 153 LKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLDITAKGDDDSFHSEPSPELF 212
Query: 214 ----ALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVLKEIEKLTRKKKM 269
A Y++ R GY TADV++SL+K+A++L ++DL+AVT+ED+ LE+LKEIEKLTR KKM
Sbjct: 213 DTLKASYEKSRKGYETADVSISLEKIATKLEFEDLEAVTSEDIALEILKEIEKLTRVKKM 272
Query: 270 MEEAARPF 277
MEEA+RPF
Sbjct: 273 MEEASRPF 280
>TAIR|locus:2052586 [details] [associations]
symbol:SK1 "shikimate kinase 1" species:3702 "Arabidopsis
thaliana" [GO:0004765 "shikimate kinase activity" evidence=IEA;IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;TAS] [GO:0019632 "shikimate metabolic process"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] HAMAP:MF_00109 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009507 EMBL:CP002685 GO:GO:0046872
GO:GO:0004765 GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100
PROSITE:PS01128 InterPro:IPR023000 GO:GO:0019632 KO:K00891
OMA:YTMAFSK UniGene:At.47529 UniGene:At.50089 IPI:IPI00529386
RefSeq:NP_001077937.1 ProteinModelPortal:F4IIJ2 SMR:F4IIJ2
PRIDE:F4IIJ2 EnsemblPlants:AT2G21940.4 GeneID:816730
KEGG:ath:AT2G21940 Uniprot:F4IIJ2
Length = 304
Score = 244 (91.0 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 69/208 (33%), Positives = 107/208 (51%)
Query: 22 LKFDPPFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDP--SFA 79
+K D F L P R + Q +S P + S +D+ +S + + + P
Sbjct: 35 VKVDRRFRGLSLARLQPERRNDQRRAVS--PAV---SCSDNNSSGALLETGSVYPFDEDI 89
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+K+KA ++ L G S++LVGM + KT +GK ++ L Y +FD D+L+ +A G S A+
Sbjct: 90 LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 149
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVPPGMV 199
F E ++ ET+ LK+LSS ++VV G GAV N + GIS+W+DVP +
Sbjct: 150 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 209
Query: 200 A-RMDHSGFPESELFALYKEMRDGYATA 226
A R+ G L L+ E D Y+ A
Sbjct: 210 AHRIAAVGTDSRPL--LHDESGDAYSVA 235
Score = 89 (36.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 212 LFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVLKEIEKLTRKKKMME 271
L A++ E + Y A+ VSL+ +A++ GY ++ +T ++ +E +++ K++ ME
Sbjct: 239 LSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKEETME 298
>UNIPROTKB|Q5NTH3 [details] [associations]
symbol:SK2 "Shikimate kinase 2, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0004765 "shikimate
kinase activity" evidence=IDA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
[GO:0019632 "shikimate metabolic process" evidence=IDA]
HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009536 EMBL:AP008212 GO:GO:0004765
GO:GO:0009073 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
GO:GO:0019632 KO:K00891 BRENDA:2.7.1.71 EMBL:AB188835 EMBL:AP003513
RefSeq:NP_001057199.2 UniGene:Os.56273 ProteinModelPortal:Q5NTH3
STRING:Q5NTH3 EnsemblPlants:LOC_Os06g12150.1 GeneID:4340547
KEGG:osa:4340547 Gramene:Q5NTH3 OMA:HENSHNS ProtClustDB:CLSN2696071
Uniprot:Q5NTH3
Length = 307
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 70/195 (35%), Positives = 108/195 (55%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+K+ ++ L G ++LVGM + K+ + K LA+ L Y +FDSD LV +A G
Sbjct: 76 DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGM 135
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+E E ++ E+ VL+ LSSM RLVV G GAV N ++ G+S+W+DV
Sbjct: 136 PSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 195
Query: 195 PPGMVAR-MDHSGFPESELFALYKEMRDGYATADVTVSLQKVASQLG--YDDLDA-VTTE 250
P +AR + G L L + D Y A +S+ +A Q G Y + DA V+ E
Sbjct: 196 PLDALARRIAQVGTASRPL--LDQPSSDPYTAAFSKLSM--LAEQRGDAYANADARVSLE 251
Query: 251 DMTLEV-LKEIEKLT 264
++ + ++ KLT
Sbjct: 252 EIAAKQGHDDVSKLT 266
>UNIPROTKB|Q7X7H9 [details] [associations]
symbol:SK3 "Shikimate kinase 3, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0004765 "shikimate
kinase activity" evidence=IDA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
[GO:0019632 "shikimate metabolic process" evidence=IDA]
HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009536 EMBL:AP008210 EMBL:CM000141
GO:GO:0004765 GO:GO:0009073 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 eggNOG:COG0703 KO:K00891 BRENDA:2.7.1.71
EMBL:AB188836 EMBL:AL606455 EMBL:AL606649 RefSeq:NP_001054037.2
UniGene:Os.7634 HSSP:P24167 ProteinModelPortal:Q7X7H9 STRING:Q7X7H9
EnsemblPlants:LOC_Os04g54800.1 GeneID:4337165 KEGG:osa:4337165
Gramene:Q7X7H9 OMA:KEDGMAR Uniprot:Q7X7H9
Length = 287
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 67/183 (36%), Positives = 101/183 (55%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+KA D+ L ++LVGM + KT +GK LA+ L Y +FDSD LV +A G
Sbjct: 73 DEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGI 132
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+EVL+ LSSM RLVV G GAV N + ++ G ++W+DV
Sbjct: 133 SSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDV 192
Query: 195 PPGMVARMDHS-GFPESELFALYKEMRDGYATADVTVSLQKVASQLGYDDLDA-VTTEDM 252
P +AR + G L L++E D YA A ++ Y + DA V+ E +
Sbjct: 193 PLDALARRIAAVGTASRPL--LHQESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHI 250
Query: 253 TLE 255
++
Sbjct: 251 AVK 253
>UNIPROTKB|Q5NTH4 [details] [associations]
symbol:SK1 "Shikimate kinase 1, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0004765 "shikimate
kinase activity" evidence=IDA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
[GO:0019632 "shikimate metabolic process" evidence=IDA]
HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009536 EMBL:AP008208 GO:GO:0004765
GO:GO:0009073 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
GO:GO:0019632 KO:K00891 EMBL:AB188834 EMBL:AP005848
RefSeq:NP_001048125.1 ProteinModelPortal:Q5NTH4 STRING:Q5NTH4
GeneID:4330732 KEGG:dosa:Os02t0749300-01 KEGG:dosa:Os06t0225800-01
KEGG:osa:4330732 Gramene:Q5NTH4 OMA:YTMAFSK BRENDA:2.7.1.71
Uniprot:Q5NTH4
Length = 308
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 67/195 (34%), Positives = 108/195 (55%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+K+ ++ L G ++LVGM + K+ +GK +++ L Y +FDSD LV +A G
Sbjct: 78 DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGM 137
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDV 194
S A+ F+ E ++ E+ VL+ LSSM RLVV G GAV N ++ G+S+W+DV
Sbjct: 138 PSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 197
Query: 195 PPGMVAR-MDHSGFPESELFALYKEMRDGYATADVTVSLQKVASQLG--YDDLDA-VTTE 250
P +AR + G L L + D Y A +S+ +A Q G Y + D V+ E
Sbjct: 198 PLDALARRIAKVGTASRPL--LDQPSGDPYTMAFSKLSM--LAEQRGDAYANADVRVSLE 253
Query: 251 DM-TLEVLKEIEKLT 264
++ + + ++ KLT
Sbjct: 254 EIASKQGHDDVSKLT 268
>TIGR_CMR|GSU_2026 [details] [associations]
symbol:GSU_2026 "shikimate kinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004765 "shikimate kinase
activity" evidence=ISS] [GO:0009423 "chorismate biosynthetic
process" evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891
OMA:ADIPWIF RefSeq:NP_953075.2 ProteinModelPortal:Q74BL5
GeneID:2686093 KEGG:gsu:GSU2026 PATRIC:22026913
ProtClustDB:CLSK828692 BioCyc:GSUL243231:GH27-2060-MONOMER
Uniprot:Q74BL5
Length = 175
Score = 136 (52.9 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S G +V L G K+ +GK LA L Y + D D+L+ E AG S + F E
Sbjct: 1 MSVPSDGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERAG-ISINEIFERYGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLR 185
+ +++ ETE ++ L + VV G GAV + N LLR
Sbjct: 60 QRFRELETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLR 98
>TIGR_CMR|SPO_1634 [details] [associations]
symbol:SPO_1634 "shikimate kinase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004765 "shikimate kinase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623
Pfam:PF01202 GO:GO:0005524 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0004765 GO:GO:0009073
GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891 OMA:ADIPWIF
RefSeq:YP_166875.1 ProteinModelPortal:Q5LSY0 GeneID:3194890
KEGG:sil:SPO1634 PATRIC:23376593 ProtClustDB:PRK13946
Uniprot:Q5LSY0
Length = 195
Score = 138 (53.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G+ LA L + DSD+ + E+A S + F E ++ E+
Sbjct: 22 TVVMVGMMGAGKTAVGRALAQRLGVPFLDSDAEI-ESAANMSIPEIFERDGEAFFRDRES 80
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALL-RHGISLWIDVPPGMV-ARMDH-------- 204
V+ +L V+ G GA + AN ++ HG+S+W+ ++ R+ H
Sbjct: 81 RVIARLLEGAPCVLSTGGGAFLAEANRRMISEHGVSVWLKADLTVLWNRVRHKDTRPLLR 140
Query: 205 SGFPESELFALYKEMRDGYATADVTV 230
+ P + L ALY+ Y+ AD+ V
Sbjct: 141 TADPRATLRALYEARVPLYSEADLCV 166
>TIGR_CMR|SO_0286 [details] [associations]
symbol:SO_0286 "shikimate kinase" species:211586
"Shewanella oneidensis MR-1" [GO:0004765 "shikimate kinase
activity" evidence=ISS] [GO:0009423 "chorismate biosynthetic
process" evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891
OMA:ADIPWIF ProtClustDB:PRK05057 RefSeq:NP_715926.1
ProteinModelPortal:Q8EK20 SMR:Q8EK20 GeneID:1168168
KEGG:son:SO_0286 PATRIC:23520279 Uniprot:Q8EK20
Length = 171
Score = 126 (49.4 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 50/175 (28%), Positives = 85/175 (48%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + + G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEIEQRTGAD-IAWVFDVEGEEGFRRREA 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS-ANLALLRHGISLWIDVP-PGMVARMDHSGFPESEL 212
+V+ LS +V+ G G+VQS L GI ++++ VAR L
Sbjct: 65 QVIADLSEKQGIVLATGGGSVQSKDIRNHLSARGIVVYLETTIDKQVARTQRD--KRRPL 122
Query: 213 FALYKEMRDGYATADVTVSLQKVASQLGYDDL-DAVT-TEDMTLEVLKE--IEKL 263
++ D +V SL ++ + L Y+++ D V T+D + +V+ IEKL
Sbjct: 123 L----QVDD---PREVLESLAEIRNPL-YEEIADVVVKTDDQSAKVVANQIIEKL 169
>UNIPROTKB|Q9KNV1 [details] [associations]
symbol:aroK "Shikimate kinase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004765 "shikimate
kinase activity" evidence=ISS] [GO:0009423 "chorismate biosynthetic
process" evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 eggNOG:COG0703 KO:K00891 OMA:ADIPWIF
ProtClustDB:PRK05057 PIR:C82053 RefSeq:NP_232257.1
ProteinModelPortal:Q9KNV1 SMR:Q9KNV1 DNASU:2615646 GeneID:2615646
KEGG:vch:VC2629 PATRIC:20084282 Uniprot:Q9KNV1
Length = 174
Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 31/100 (31%), Positives = 54/100 (54%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWID 193
V+ L+ +V+ G G+V S N L GI ++++
Sbjct: 65 AVINDLTEQQGIVLATGGGSVISKENRNRLSARGIVVYLE 104
>TIGR_CMR|VC_2629 [details] [associations]
symbol:VC_2629 "shikimate kinase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004765 "shikimate kinase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623
Pfam:PF01202 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004765 GO:GO:0009073
GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
eggNOG:COG0703 KO:K00891 OMA:ADIPWIF ProtClustDB:PRK05057
PIR:C82053 RefSeq:NP_232257.1 ProteinModelPortal:Q9KNV1 SMR:Q9KNV1
DNASU:2615646 GeneID:2615646 KEGG:vch:VC2629 PATRIC:20084282
Uniprot:Q9KNV1
Length = 174
Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 31/100 (31%), Positives = 54/100 (54%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANL-ALLRHGISLWID 193
V+ L+ +V+ G G+V S N L GI ++++
Sbjct: 65 AVINDLTEQQGIVLATGGGSVISKENRNRLSARGIVVYLE 104
>TIGR_CMR|CPS_0472 [details] [associations]
symbol:CPS_0472 "shikimate kinase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004765 "shikimate kinase
activity" evidence=ISS] [GO:0009423 "chorismate biosynthetic
process" evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 RefSeq:YP_267230.1 ProteinModelPortal:Q489N4
SMR:Q489N4 STRING:Q489N4 GeneID:3520280 KEGG:cps:CPS_0472
PATRIC:21464297 eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891
OMA:ADIPWIF BioCyc:CPSY167879:GI48-567-MONOMER Uniprot:Q489N4
Length = 172
Score = 121 (47.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 32/101 (31%), Positives = 56/101 (55%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ +AD L +FDSD + E G A F E+G+++ E
Sbjct: 6 NIFLIGPMGAGKSTIGREIADRLHLEFFDSDQEI-ERRTGADIAWVFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLA--LLRHGISLWID 193
V++ LS +V+ G G+V S+ N+ L GI ++++
Sbjct: 65 TVIEDLSEKHGIVLATGGGSVIST-NVRNHLSARGIVVYLE 104
>TIGR_CMR|CBU_1892 [details] [associations]
symbol:CBU_1892 "shikimate kinase" species:227377
"Coxiella burnetii RSA 493" [GO:0004765 "shikimate kinase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623
Pfam:PF01202 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004765 GO:GO:0009073
GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891 OMA:ADIPWIF
RefSeq:NP_820869.1 PDB:3TRF PDBsum:3TRF ProteinModelPortal:Q83AJ3
GeneID:1209805 KEGG:cbu:CBU_1892 PATRIC:17932517
ProtClustDB:CLSK915106 BioCyc:CBUR227377:GJ7S-1867-MONOMER
EvolutionaryTrace:Q83AJ3 Uniprot:Q83AJ3
Length = 179
Score = 120 (47.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 36/171 (21%), Positives = 73/171 (42%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T+++L+G+ A KT +G LA + +DSD + E G A F E G+++ E
Sbjct: 6 TNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEI-EKRTGADIAWIFEMEGEAGFRRRE 64
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH-GISLWIDVP-PGMVARMDHSGFPESE 211
E+++ L + +++ G G V N + G+ +++ + R+ G
Sbjct: 65 REMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLTASIDTQLKRIGQKGEMRRP 124
Query: 212 LFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVLKEIEK 262
LF ++ L + + L Y D + + ++L +I++
Sbjct: 125 LFIKNNSKEKLQQLNEIRKPLYQAMADLVYPT-DDLNPRQLATQILVDIKQ 174
>UNIPROTKB|P0A6D7 [details] [associations]
symbol:aroK "shikimate kinase I" species:83333 "Escherichia
coli K-12" [GO:0016310 "phosphorylation" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004765 "shikimate kinase activity"
evidence=IEA] [GO:0009423 "chorismate biosynthetic process"
evidence=IEA] HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623
Pfam:PF01202 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 GO:GO:0004765 GO:GO:0009073 GO:GO:0009423
PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000 EMBL:Z19601
eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891 OMA:ADIPWIF
EMBL:M76389 EMBL:X80167 EMBL:L39822 PIR:A65134 RefSeq:YP_026215.2
RefSeq:YP_492042.1 PDB:1KAG PDBsum:1KAG ProteinModelPortal:P0A6D7
SMR:P0A6D7 DIP:DIP-48271N IntAct:P0A6D7 MINT:MINT-1299909
SWISS-2DPAGE:P0A6D7 PRIDE:P0A6D7 EnsemblBacteria:EBESCT00000004465
EnsemblBacteria:EBESCT00000004466 EnsemblBacteria:EBESCT00000018087
GeneID:12930303 GeneID:2847759 KEGG:ecj:Y75_p3786 KEGG:eco:b3390
PATRIC:32122212 EchoBASE:EB0079 EcoGene:EG10081
ProtClustDB:PRK05057 BioCyc:EcoCyc:AROK-MONOMER
BioCyc:ECOL316407:JW5947-MONOMER BioCyc:MetaCyc:AROK-MONOMER
EvolutionaryTrace:P0A6D7 Genevestigator:P0A6D7 Uniprot:P0A6D7
Length = 173
Score = 115 (45.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 45/162 (27%), Positives = 75/162 (46%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L ++DSD + E G F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEI-EKRTGADVGWVFDLEGEEGFRDREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS-SANLALLRHGISLWIDVP-PGMVARMD--------H 204
+V+ +L+ +V+ G G+V+S L G+ ++++ +AR H
Sbjct: 65 KVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLH 124
Query: 205 SGFPESELF-ALYKEMRDGYAT-ADVTV-----SLQKVASQL 239
P E+ AL E Y ADVT+ S + VA+Q+
Sbjct: 125 VETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQI 166
>TIGR_CMR|CHY_0629 [details] [associations]
symbol:CHY_0629 "shikimate kinase/3-dehydroquinate
synthase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003856 "3-dehydroquinate synthase activity" evidence=ISS]
[GO:0004765 "shikimate kinase activity" evidence=ISS] [GO:0009423
"chorismate biosynthetic process" evidence=ISS] HAMAP:MF_00109
HAMAP:MF_00110 InterPro:IPR016037 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003856 GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 TIGRFAMs:TIGR01357
PROSITE:PS01128 HOGENOM:HOG000007970 InterPro:IPR023000
eggNOG:COG0703 RefSeq:YP_359485.1 ProteinModelPortal:Q3AEE9
STRING:Q3AEE9 GeneID:3726881 KEGG:chy:CHY_0629 PATRIC:21274397
KO:K13829 OMA:REYDIRI BioCyc:CHYD246194:GJCN-629-MONOMER
Uniprot:Q3AEE9
Length = 529
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 44/179 (24%), Positives = 86/179 (48%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ LVG+ A KTH+G+ LA L+ + D D + E G + + F E+ +++ E
Sbjct: 2 NIILVGLPGAGKTHIGRILARKLKRNFVDLDRKIEEETG-LTIKEIFARFGERYFRRLEV 60
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS-SANLALLRHGISLWIDVPPGMVAR----MDH----- 204
+ L++L + V+ G G V+ A L G+ +++ P ++ R +++
Sbjct: 61 KKLQELFKLHNAVIATGGGTVERMDARRKLKNLGLVVYLKASPEVIIRRLINLENRPILT 120
Query: 205 SGFPESELFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVLKEIEKL 263
G P +L LY+ RD + V++ G + +DA+ + +T++ L+ KL
Sbjct: 121 QGDPLEKLSELYRR-RDKFYREVSDVAINTEGKDSG-EVVDAIL-KSLTIDGLRFPRKL 176
>TAIR|locus:2062486 [details] [associations]
symbol:SKL2 "shikimate kinase-like 2" species:3702
"Arabidopsis thaliana" [GO:0004765 "shikimate kinase activity"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009073 "aromatic
amino acid family biosynthetic process" evidence=RCA;TAS]
[GO:0000096 "sulfur amino acid metabolic process" evidence=RCA]
[GO:0006546 "glycine catabolic process" evidence=RCA] [GO:0006636
"unsaturated fatty acid biosynthetic process" evidence=RCA]
[GO:0006733 "oxidoreduction coenzyme metabolic process"
evidence=RCA] [GO:0006766 "vitamin metabolic process" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009069 "serine family amino acid metabolic
process" evidence=RCA] [GO:0009072 "aromatic amino acid family
metabolic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0015995
"chlorophyll biosynthetic process" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019344 "cysteine
biosynthetic process" evidence=RCA] [GO:0019748 "secondary
metabolic process" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016301
InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01128 EMBL:AC005314
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 EMBL:AF412061
EMBL:AY074560 IPI:IPI00539122 PIR:D84769 RefSeq:NP_565805.1
UniGene:At.13015 ProteinModelPortal:O82290 SMR:O82290 IntAct:O82290
STRING:O82290 PaxDb:O82290 PRIDE:O82290 EnsemblPlants:AT2G35500.1
GeneID:818115 KEGG:ath:AT2G35500 TAIR:At2g35500 eggNOG:NOG296162
HOGENOM:HOG000005904 InParanoid:O82290 OMA:LGCRGDW PhylomeDB:O82290
ProtClustDB:CLSN2688705 Genevestigator:O82290 Uniprot:O82290
Length = 387
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 48/173 (27%), Positives = 76/173 (43%)
Query: 91 LKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQ 150
LKG S+++VG + I + + LA L Y DS L+ E+ ++
Sbjct: 183 LKGASIYIVGDSTEINQKVSRELAVGLGYSPLDSKELL-ESFSKQTIDSWILAEGPDSVA 241
Query: 151 QAETEVLKQLSSMGRLVVCAGNGAVQSSANLALLRH---GISLWIDVPPGMVARMDHSGF 207
+AE+ VL+ LSS R VV G ++ RH G ++W+ A + S
Sbjct: 242 EAESSVLESLSSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTE---ATDEESAK 298
Query: 208 PESELFALYKEMRDGYATADVTVSLQKVASQLGYDDLDAVTTEDMTLEVLKEI 260
E+ +E+ GY+ ADV V LQ G+D A + +L LK++
Sbjct: 299 EEARRSKQEREI--GYSNADVVVKLQ------GWDPTHAKSVAQASLSALKQL 343
>TIGR_CMR|DET_0464 [details] [associations]
symbol:DET_0464 "shikimate kinase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004765 "shikimate kinase
activity" evidence=ISS] [GO:0009423 "chorismate biosynthetic
process" evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128
eggNOG:COG0703 KO:K00891 OMA:ADIPWIF RefSeq:YP_181208.1
ProteinModelPortal:Q3Z991 STRING:Q3Z991 GeneID:3230171
KEGG:det:DET0464 PATRIC:21607997 HOGENOM:HOG000032569
ProtClustDB:CLSK837441 BioCyc:DETH243164:GJNF-464-MONOMER
Uniprot:Q3Z991
Length = 176
Score = 112 (44.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 33/118 (27%), Positives = 63/118 (53%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G A K+ + K L++ L +D+ + E G S F+E E ++Q E+
Sbjct: 6 NIALIGFMGAGKSSVSKLLSERLGKTLVSTDACI-ETREGLSIISIFKEKGEDYFRQMES 64
Query: 155 EVLKQLSSM-GRLVVCAGNGAVQSSANLALLR-HGISLWIDV-PPGMVARM-DHSGFP 208
VL+ L G+++ C G G V NL+L+R + + ++++ P + AR+ +H+ P
Sbjct: 65 RVLEDLCRQSGQIIDCGG-GIVMRPPNLSLMRLNCLVIYLESRPEDLEARLKNHTNRP 121
>MGI|MGI:2139347 [details] [associations]
symbol:Thnsl1 "threonine synthase-like 1 (bacterial)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001926
InterPro:IPR000623 InterPro:IPR004450 Pfam:PF01202 Pfam:PF00291
MGI:MGI:2139347 GO:GO:0005524 SUPFAM:SSF53686 GO:GO:0009088
GO:GO:0004765 PRINTS:PR01100 eggNOG:COG0703 CTD:79896
HOGENOM:HOG000065776 HOVERGEN:HBG055015 OMA:GSPVDVC
OrthoDB:EOG43R3M1 GO:GO:0004795 TIGRFAMs:TIGR00260 EMBL:AK029518
EMBL:AK083895 IPI:IPI00221739 RefSeq:NP_001001297.1
RefSeq:NP_808256.1 UniGene:Mm.268841 ProteinModelPortal:Q8BH55
SMR:Q8BH55 PhosphoSite:Q8BH55 PaxDb:Q8BH55 PRIDE:Q8BH55
Ensembl:ENSMUST00000054591 GeneID:208967 KEGG:mmu:208967
GeneTree:ENSGT00530000063879 InParanoid:Q8BH55 NextBio:372482
Bgee:Q8BH55 CleanEx:MM_THNSL1 Genevestigator:Q8BH55
GermOnline:ENSMUSG00000048550 Uniprot:Q8BH55
Length = 747
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 28/109 (25%), Positives = 60/109 (55%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++ L+G + KT +G+ L D L D DS V E A SA++ ++ + + + E
Sbjct: 57 NIVLMGPPGSGKTTVGRILGDKLGCCVIDVDSDVLEKAWNMSASEKLQDVGNERFLEEEG 116
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLALLRHGISLWIDVP-PGMVARM 202
+ + LS+ G ++ +G+ + ++ L ++GI +++DVP +++R+
Sbjct: 117 KTVLNLSASGSVISLSGSNPMHDASMWHLKKNGIVVYLDVPLTDIISRL 165
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.357 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 277 261 0.00090 114 3 11 23 0.50 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 589 (63 KB)
Total size of DFA: 160 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.95u 0.12s 25.07t Elapsed: 00:00:01
Total cpu time: 24.95u 0.12s 25.07t Elapsed: 00:00:01
Start: Fri May 10 20:25:05 2013 End: Fri May 10 20:25:06 2013