BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023783
(277 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GWR0|COX11_ARATH Cytochrome c oxidase assembly protein COX11, mitochondrial
OS=Arabidopsis thaliana GN=COX11 PE=2 SV=1
Length = 287
Score = 357 bits (916), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 168/195 (86%), Positives = 178/195 (91%)
Query: 81 FSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKE 140
S R Y++H+ +E KS+KML YLTA+VF MVG TYAAVPLYR FCQATGYGGTVQRKE
Sbjct: 73 LDSAHRQYSTHSPSETKSQKMLYYLTAVVFGMVGLTYAAVPLYRTFCQATGYGGTVQRKE 132
Query: 141 TVEEKIARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENR 200
TVEEKIARHS+ GTVT RE+VVQFNADVADGM WKF PTQREVRVKPGESALAFYTAEN+
Sbjct: 133 TVEEKIARHSESGTVTEREIVVQFNADVADGMQWKFTPTQREVRVKPGESALAFYTAENK 192
Query: 201 SSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMD 260
SS PITGVSTYNVTPMKA VYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMD
Sbjct: 193 SSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMD 252
Query: 261 GINNLILSYTFFKVN 275
GINNLILSYTFFKV+
Sbjct: 253 GINNLILSYTFFKVS 267
>sp|O21243|COXZ_RECAM Cytochrome c oxidase assembly protein ctaG OS=Reclinomonas
americana GN=CTAG PE=3 SV=1
Length = 182
Score = 207 bits (527), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 97 KSRKMLLYLTALV-FAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTV 155
K+RK + L A V M+G +Y +VPLYR FCQ TG+GGT Q + + + KD
Sbjct: 3 KNRKSIAILIAAVSITMIGFSYGSVPLYRIFCQVTGFGGTTQVADLESDILTL--KDEQQ 60
Query: 156 TTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTP 215
R + V+FN DV+D MPWKF P Q+E++V GE+ALAFY+AEN + + I G+STYNV P
Sbjct: 61 ENRIITVRFNGDVSDTMPWKFHPIQQEIKVMVGETALAFYSAENPTDSSIIGISTYNVNP 120
Query: 216 MKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVN 275
+A +YFNKIQCFCFEEQRL P E IDMPVFF+IDP DP+M I+++ LSYTFF V
Sbjct: 121 QQAGIYFNKIQCFCFEEQRLKPHETIDMPVFFFIDPAILDDPKMSDIDSITLSYTFFNVE 180
Query: 276 E 276
+
Sbjct: 181 D 181
>sp|Q6P8I6|COX11_MOUSE Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Mus
musculus GN=Cox11 PE=2 SV=1
Length = 275
Score = 201 bits (511), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/228 (47%), Positives = 137/228 (60%), Gaps = 27/228 (11%)
Query: 54 CGYGSNMTNGYRKPQSFGSGCLWKSNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMV 113
CG T R+P+S SN F QR A ++++ +L Y+ A M+
Sbjct: 60 CGVRGPATQPPRRPRS--------SNPF---QR--AQEDEWRRRNKTVLTYVAAAAVGML 106
Query: 114 GSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGT-----VTTREVVVQFNADV 168
G++YAAVPLYR +CQ TG GG+ +A HS D V R + V FNADV
Sbjct: 107 GASYAAVPLYRLYCQTTGLGGSA---------VAGHSSDQIENMVPVKDRVIKVTFNADV 157
Query: 169 ADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCF 228
+ W F P Q E+ V PGE+ALAFY A+N + P+ G+STYNV P +A YFNKIQCF
Sbjct: 158 HASLQWNFRPQQTEIYVVPGETALAFYKAKNPTDKPVIGISTYNVVPFEAGQYFNKIQCF 217
Query: 229 CFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNE 276
CFEEQRL P E++DMPVFFYIDPEF DPRM ++ + LSYTFF+ E
Sbjct: 218 CFEEQRLNPQEEVDMPVFFYIDPEFAEDPRMVNVDLITLSYTFFEAKE 265
>sp|A3KMZ6|COX11_BOVIN Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Bos
taurus GN=COX11 PE=2 SV=1
Length = 282
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 123/186 (66%), Gaps = 14/186 (7%)
Query: 96 QKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGT- 154
++++ +L Y+ A M+G++YAAVPLYR +CQ TG GG+ +A H+ D
Sbjct: 85 RRNKTVLTYMAAAAVGMLGASYAAVPLYRLYCQTTGLGGSA---------VAGHASDQIE 135
Query: 155 ----VTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVST 210
V R + + FNADV + W F P Q E+ V PGE+ALAFY A+N + P+ G+ST
Sbjct: 136 NMVPVKDRIIKITFNADVHASLQWNFRPQQTEIYVVPGETALAFYKAKNPTDKPVIGIST 195
Query: 211 YNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYT 270
YNV P +A YFNKIQCFCFEEQRL P E++DMPVFFYIDPEF DPRM ++ + LSYT
Sbjct: 196 YNVVPFEAGQYFNKIQCFCFEEQRLNPQEEVDMPVFFYIDPEFAEDPRMVNVDLITLSYT 255
Query: 271 FFKVNE 276
FF+ E
Sbjct: 256 FFEAKE 261
>sp|Q9Y6N1|COX11_HUMAN Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Homo
sapiens GN=COX11 PE=1 SV=3
Length = 276
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 129/205 (62%), Gaps = 16/205 (7%)
Query: 77 KSNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTV 136
+ S + F R A ++++ L Y+ A+ M+G++YAAVPLYR +CQ TG GG+
Sbjct: 73 RPKSSNPFTR--AQEEERRRQNKTTLTYVAAVAVGMLGASYAAVPLYRLYCQTTGLGGSA 130
Query: 137 QRKETVEEKIARHSKDGT-----VTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESA 191
+A H+ D V R + + FNADV + W F P Q E+ V PGE+A
Sbjct: 131 ---------VAGHASDKIENMVPVKDRIIKISFNADVHASLQWNFRPQQTEIYVVPGETA 181
Query: 192 LAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDP 251
LAFY A+N + P+ G+STYN+ P +A YFNKIQCFCFEEQRL P E++DMPVFFYIDP
Sbjct: 182 LAFYRAKNPTDKPVIGISTYNIVPFEAGQYFNKIQCFCFEEQRLNPQEEVDMPVFFYIDP 241
Query: 252 EFETDPRMDGINNLILSYTFFKVNE 276
EF DPRM ++ + LSYTFF+ E
Sbjct: 242 EFAEDPRMIKVDLITLSYTFFEAKE 266
>sp|Q9UTM2|CO111_SCHPO Rsm22-cox11 tandem protein 1, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cox1101 PE=1 SV=2
Length = 753
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 141/236 (59%), Gaps = 22/236 (9%)
Query: 56 YGSNMTNGYRKPQSFGSG---CLWKSNSFSSFQ-----RHYASHASTEQ---KSRKMLLY 104
Y +N + + F S C++ SFS + R Y+ S ++ R + Y
Sbjct: 516 YSTNRHKAFSRFADFNSHRFPCIF--TSFSCYNCISGTRKYSRQYSRDKFHYNQRTTIYY 573
Query: 105 LTALVFAMVGSTYAAVPLYRRFCQATGYGGTV---QRKETVEEKIARHSKDGTVTTREVV 161
L A+ +G TYAAVPLYR FC TGYGGT+ Q + E + R KD + +
Sbjct: 574 LVAISIFALGLTYAAVPLYRLFCSKTGYGGTLNTDQSRMNAERMVPR--KDN----KRIR 627
Query: 162 VQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVY 221
V FN DVA + WK P QRE+ V PGE+AL FYTAEN S I GV+TYN+ P +AAVY
Sbjct: 628 VTFNGDVAGNLSWKLWPQQREIYVLPGETALGFYTAENTSDHDIVGVATYNIVPGQAAVY 687
Query: 222 FNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNED 277
F+K+ CFCFEEQ+L E++D+PVFF+IDPEF DP M I++++LSYTFF+ D
Sbjct: 688 FSKVACFCFEEQKLDAHEKVDLPVFFFIDPEFADDPNMKDIDDILLSYTFFEARYD 743
>sp|Q86ZU7|CO112_SCHPO Rsm22-cox11 tandem protein 2, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cos1102 PE=1 SV=2
Length = 753
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 133/220 (60%), Gaps = 11/220 (5%)
Query: 62 NGYRKPQSFGS-GCLWKSNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAV 120
N +R P F S C + + R Y S R + YL A+ +G TYAAV
Sbjct: 531 NSHRFPCIFTSFSCYNCISGTRNISRQY-SRDKFHYNQRTTIYYLVAISIFALGLTYAAV 589
Query: 121 PLYRRFCQATGYGGTV---QRKETVEEKIARHSKDGTVTTREVVVQFNADVADGMPWKFI 177
PLYR FC TGYGGT+ Q + E + R KD + + V FN DVA + WK
Sbjct: 590 PLYRLFCSKTGYGGTLNTDQSRMNAERMVPR--KDN----KRIRVTFNGDVAGNLSWKLW 643
Query: 178 PTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLP 237
P QRE+ V PGE+AL FYTAEN S I GV+TYN+ P +AAVYF+K+ CFCFEEQ+L
Sbjct: 644 PQQREIYVLPGETALGFYTAENTSDHDIVGVATYNIVPGQAAVYFSKVACFCFEEQKLDA 703
Query: 238 GEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNED 277
E++D+PVFF+IDPEF DP M I++++LSYTFF+ D
Sbjct: 704 HEKVDLPVFFFIDPEFADDPNMKDIDDILLSYTFFEARYD 743
>sp|Q5R7U6|COX11_PONAB Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Pongo
abelii GN=COX11 PE=3 SV=2
Length = 277
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 129/205 (62%), Gaps = 20/205 (9%)
Query: 78 SNSFSSFQRHYASHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQ 137
SN F+ Q+ ++++ L Y+ A+ M+G++YAAVPLYR +CQ TG GG+
Sbjct: 77 SNPFTRAQKE-----EWRRRNKTTLTYVAAVAVGMLGASYAAVPLYRLYCQTTGLGGSA- 130
Query: 138 RKETVEEKIARHSKDGT-----VTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESAL 192
+A H+ D V R + + FNADV + W F P Q E+ V PGE+AL
Sbjct: 131 --------VAGHASDKIENMVPVKDRIIKISFNADVHASLQWNFRPQQTEIYVVPGETAL 182
Query: 193 AFYTAENRSSTPITGVSTYNVTPMKAAVYFNKI-QCFCFEEQRLLPGEQIDMPVFFYIDP 251
AFY A+N + P+ G+STYN+ P +A YFNKI QCFCFEEQRL P E++DMPVFFYIDP
Sbjct: 183 AFYRAKNPTDKPVIGISTYNIVPFEAGQYFNKIQQCFCFEEQRLNPQEEVDMPVFFYIDP 242
Query: 252 EFETDPRMDGINNLILSYTFFKVNE 276
EF DPRM ++ + LSYTFF+ E
Sbjct: 243 EFAEDPRMIKVDLITLSYTFFEAKE 267
>sp|P19516|COX11_YEAST Cytochrome c oxidase assembly protein COX11, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=COX11 PE=3 SV=2
Length = 300
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 9/182 (4%)
Query: 97 KSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGG---TVQRKETVEEKIARHSKDG 153
K R + Y +++ +G YAAVPLYR C TG+GG T +RK T ++ I
Sbjct: 81 KDRTVAFYFSSVAVLFLGLAYAAVPLYRAICARTGFGGIPITDRRKFTDDKLIP------ 134
Query: 154 TVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNV 213
T + + + F ++V+ +PWKF+P QREV V PGE+ALAFY A+N S I G++TY++
Sbjct: 135 VDTEKRIRISFTSEVSQILPWKFVPQQREVYVLPGETALAFYKAKNYSDKDIIGMATYSI 194
Query: 214 TPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFK 273
P +AA YFNKIQCFCFEEQ+L GE+IDMPVFF+IDP+F +DP M I+++IL YTFF+
Sbjct: 195 APGEAAQYFNKIQCFCFEEQKLAAGEEIDMPVFFFIDPDFASDPAMRNIDDIILHYTFFR 254
Query: 274 VN 275
+
Sbjct: 255 AH 256
>sp|Q54HM6|COX11_DICDI Cytochrome c oxidase assembly protein COX11, mitochondrial
OS=Dictyostelium discoideum GN=cox11 PE=3 SV=1
Length = 312
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 95 EQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGT 154
++K++ + LY+ + ++G +YAAVPLYR FC+ATGYGGT + + + I + + D T
Sbjct: 127 QEKNKAIGLYVLIAIIGILGLSYAAVPLYRIFCRATGYGGTTRDADDFD-VIRKRNLDRT 185
Query: 155 VTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVT 214
V + V F+A A+ +PW F PTQ + PGE L FY A N + TPI GV+TYN+T
Sbjct: 186 V--YPIKVTFSASTANKIPWTFKPTQSTIECLPGEPVLCFYRATNNTDTPIIGVATYNIT 243
Query: 215 PMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKV 274
PMKA YF KIQCFCF+EQR+ E IDMPV F I+PE D M G++++ LSYTFFK
Sbjct: 244 PMKAGTYFTKIQCFCFDEQRINAHETIDMPVLFVIEPELLDDKNMKGVSDITLSYTFFKS 303
Query: 275 NE 276
N+
Sbjct: 304 ND 305
>sp|Q1RJ56|COXZ_RICBR Cytochrome c oxidase assembly protein CtaG OS=Rickettsia bellii
(strain RML369-C) GN=ctaG PE=3 SV=1
Length = 180
Score = 181 bits (459), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 119/182 (65%), Gaps = 8/182 (4%)
Query: 96 QKSRKMLLY-LTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGT 154
+KS K L + L L+ +MV ++AAVPLY FC+ TGYGGT R E ++ +SK
Sbjct: 3 KKSNKSLAFSLLGLIVSMVLLSFAAVPLYNLFCKVTGYGGTTNR-----ETVSIYSK--V 55
Query: 155 VTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVT 214
TR ++++F+A+V +PW+FIP Q+ V++ PG++ L FY EN S I G S YNVT
Sbjct: 56 KGTRPIIIEFDANVDKNLPWRFIPRQQRVQIVPGQNTLVFYETENLSDNDIIGTSIYNVT 115
Query: 215 PMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKV 274
P KA YF KI CFCFEEQ L GE++ MPV FYID +FE DP M + L LSY+FFKV
Sbjct: 116 PNKAGKYFVKIHCFCFEEQLLKAGEKVLMPVTFYIDKDFENDPEMRDVKVLTLSYSFFKV 175
Query: 275 NE 276
+
Sbjct: 176 RD 177
>sp|Q92IL2|COXZ_RICCN Cytochrome c oxidase assembly protein CtaG OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=ctaG PE=3 SV=1
Length = 188
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 8/182 (4%)
Query: 96 QKSRKMLLY-LTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGT 154
+KS K L + L L+ +MV ++A+VP+Y FC+ TGYGGT T +E ++ +SK
Sbjct: 3 KKSNKNLAFSLLGLIISMVLLSFASVPIYNLFCKVTGYGGT-----TAKETVSVYSK--V 55
Query: 155 VTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVT 214
T+ ++++F+A+V +PW+FIP Q+ V++ PG++ L FY EN S I G S YNVT
Sbjct: 56 KGTKPIIIEFDANVDKDLPWRFIPRQQRVQIVPGQNTLVFYETENLSDNDIIGTSVYNVT 115
Query: 215 PMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKV 274
P KA YF KI CFCFEEQ L GE++ MPV FYID +FE DP M I L LSY+FFKV
Sbjct: 116 PNKAGKYFVKIHCFCFEEQLLKAGERVLMPVTFYIDKDFELDPEMQDIKVLTLSYSFFKV 175
Query: 275 NE 276
E
Sbjct: 176 RE 177
>sp|Q4UM75|COXZ_RICFE Cytochrome c oxidase assembly protein CtaG OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=ctaG PE=3 SV=1
Length = 187
Score = 178 bits (451), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 8/182 (4%)
Query: 96 QKSRKMLLY-LTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGT 154
+KS K L + L L+ +MV ++A+VP+Y FC+ TGYGGT T +E ++ +SK
Sbjct: 3 KKSNKNLAFSLLGLIISMVLLSFASVPIYNLFCKVTGYGGT-----TAKETVSVYSK--V 55
Query: 155 VTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVT 214
T+ ++++F+A+V +PW+FIP Q+ V++ PG++ L FY EN S+ I G S YNVT
Sbjct: 56 KGTKPIIIEFDANVDKDLPWRFIPRQQRVQIVPGQNTLVFYETENLSNNDIIGTSVYNVT 115
Query: 215 PMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKV 274
P KA YF KI CFCFEEQ L E++ MPV FYID +FE DP M I L LSY+FFKV
Sbjct: 116 PNKAGKYFVKIHCFCFEEQLLKADEKVLMPVTFYIDKDFELDPEMQDIKVLTLSYSFFKV 175
Query: 275 NE 276
E
Sbjct: 176 RE 177
>sp|Q9ZDM3|COXZ_RICPR Cytochrome c oxidase assembly protein CtaG OS=Rickettsia prowazekii
(strain Madrid E) GN=ctaG PE=3 SV=1
Length = 178
Score = 177 bits (450), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 122/182 (67%), Gaps = 8/182 (4%)
Query: 96 QKSRKMLLY-LTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGT 154
+KS K L + L L+ +MV ++A+VP+Y FC+ TGYGGT T++E ++ +SK
Sbjct: 3 KKSNKNLAFSLLGLMMSMVLLSFASVPIYNLFCKVTGYGGT-----TIKETVSVYSK--V 55
Query: 155 VTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVT 214
T+ ++++F+A+V +PW FIP Q+ V++ PG++ L FY AEN S+ I G S YNVT
Sbjct: 56 KGTKAIIIEFDANVDPNLPWHFIPRQKRVQIVPGQNTLVFYEAENLSNKDIIGTSIYNVT 115
Query: 215 PMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKV 274
P KA YF KI CFCFEEQ L E++ MPV FYID +FE DP M+ I + LSY+FFK+
Sbjct: 116 PNKAGKYFVKIHCFCFEEQLLKAREKVLMPVTFYIDNDFERDPEMENIKVITLSYSFFKI 175
Query: 275 NE 276
E
Sbjct: 176 RE 177
>sp|Q92RG6|COXZ_RHIME Cytochrome c oxidase assembly protein CtaG OS=Rhizobium meliloti
(strain 1021) GN=ctaG PE=1 SV=1
Length = 198
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 106/166 (63%), Gaps = 9/166 (5%)
Query: 107 ALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNA 166
A V M+G YAAVPLY FC+ TGY GT QR E + I ++ V F+A
Sbjct: 23 AFVAGMIGMAYAAVPLYDMFCRVTGYNGTTQRVEQASDLILDE---------KIKVTFDA 73
Query: 167 DVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQ 226
+VA G+PW+F+P QR++ V+ GE+ Y A+N +STP TG +T+NVTPM A YFNK+Q
Sbjct: 74 NVAAGLPWEFVPVQRDIDVRIGETVQIMYRAKNLASTPTTGQATFNVTPMAAGAYFNKVQ 133
Query: 227 CFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFF 272
CFCF E L PGE+++MPV F++DPE GI L LSYTF+
Sbjct: 134 CFCFTETTLEPGEEMEMPVVFFVDPEIVKPVETQGIKTLTLSYTFY 179
>sp|A6U6U8|COXZ_SINMW Cytochrome c oxidase assembly protein CtaG OS=Sinorhizobium medicae
(strain WSM419) GN=ctaG PE=3 SV=1
Length = 198
Score = 170 bits (431), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 111/187 (59%), Gaps = 15/187 (8%)
Query: 92 ASTEQKSRK------MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEK 145
A T Q RK ++ A V MVG YAAVPLY FC+ TGY GT QR E
Sbjct: 2 ADTGQSDRKERSNGVIVGTCLAFVVGMVGMAYAAVPLYDMFCRVTGYNGTTQRVE----- 56
Query: 146 IARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPI 205
+ + +V V F+A+VA G+PW+F P QR++ V+ GE+ Y A N +STP
Sbjct: 57 ----QESDLILDEKVKVTFDANVAAGLPWEFAPVQRDIDVRIGETVQITYRARNLASTPT 112
Query: 206 TGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNL 265
TG +T+NVTPM A YFNK+QCFCF E L PGE+++MPV F++DPE GI L
Sbjct: 113 TGQATFNVTPMAAGAYFNKVQCFCFTETTLQPGEEMEMPVVFFVDPEIVKTVETKGIKTL 172
Query: 266 ILSYTFF 272
LSYTF+
Sbjct: 173 TLSYTFY 179
>sp|Q985W8|COXZ_RHILO Cytochrome c oxidase assembly protein CtaG OS=Rhizobium loti
(strain MAFF303099) GN=ctaG PE=3 SV=1
Length = 206
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 111/171 (64%), Gaps = 9/171 (5%)
Query: 107 ALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNA 166
A M+G YAAVPLY+ FCQATGYGGT QR VE++ A G V RE+ V+F+A
Sbjct: 20 AFFTGMIGMAYAAVPLYKMFCQATGYGGTTQR---VEKQYA-----GRVLDREITVRFDA 71
Query: 167 DVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQ 226
++A G+PW+F P QR + +K GE+ A Y A N+ P+TG +T+NV P A YFNK++
Sbjct: 72 NIA-GVPWEFQPVQRSMTMKIGETVQAHYQATNKFDRPVTGRATFNVQPELAGPYFNKVE 130
Query: 227 CFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNED 277
CFCF + L PGE +DMPV FY+DP+ P + + + LSYT F V ++
Sbjct: 131 CFCFTDTSLKPGETVDMPVLFYVDPDIVNVPELKDVKTITLSYTMFPVEKN 181
>sp|Q8G261|COXZ_BRUSU Cytochrome c oxidase assembly protein CtaG OS=Brucella suis biovar
1 (strain 1330) GN=ctaG PE=3 SV=1
Length = 201
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 13/191 (6%)
Query: 90 SHASTEQKSRK----MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEK 145
E+K R+ + + + M+G+ YA+VPLYR FCQ TGYGGT QR E +
Sbjct: 3 DQGENEKKQRRSNATIAVACLSFFVCMIGAAYASVPLYRIFCQVTGYGGTTQRVEQYSD- 61
Query: 146 IARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPI 205
T+ + + V+F+A++A+G+PW F P QREV V+ GE+ + Y A N
Sbjct: 62 --------TILDKTIKVRFDANIANGLPWDFKPMQREVTVRIGETTMIKYEAHNLFGEET 113
Query: 206 TGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNL 265
G +++NV P +A YFNK++CFCF + L PGE +++PV F++DPEF DP + + +
Sbjct: 114 YGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLELPVVFFVDPEFVNDPDLKDVKTI 173
Query: 266 ILSYTFFKVNE 276
LSYTFF +++
Sbjct: 174 TLSYTFFPIDK 184
>sp|A9M8Z5|COXZ_BRUC2 Cytochrome c oxidase assembly protein CtaG OS=Brucella canis
(strain ATCC 23365 / NCTC 10854) GN=ctaG PE=3 SV=1
Length = 201
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 13/191 (6%)
Query: 90 SHASTEQKSRK----MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEK 145
E+K R+ + + + M+G+ YA+VPLYR FCQ TGYGGT QR E +
Sbjct: 3 DQGENEKKQRRSNATIAVACLSFFVCMIGAAYASVPLYRIFCQVTGYGGTTQRVEQYSD- 61
Query: 146 IARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPI 205
T+ + + V+F+A++A+G+PW F P QREV V+ GE+ + Y A N
Sbjct: 62 --------TILDKTIKVRFDANIANGLPWDFKPMQREVTVRIGETTMIKYEAHNLFGEET 113
Query: 206 TGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNL 265
G +++NV P +A YFNK++CFCF + L PGE +++PV F++DPEF DP + + +
Sbjct: 114 YGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLELPVVFFVDPEFVNDPDLKDVKTI 173
Query: 266 ILSYTFFKVNE 276
LSYTFF +++
Sbjct: 174 TLSYTFFPIDK 184
>sp|B0CKF6|COXZ_BRUSI Cytochrome c oxidase assembly protein CtaG OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=ctaG PE=3 SV=1
Length = 201
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 13/191 (6%)
Query: 90 SHASTEQKSRK----MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEK 145
E+K R+ + + + M+G+ YA+VPLYR FCQ TGYGGT QR E +
Sbjct: 3 DQGENEKKQRRSNATIAVACLSFFVCMIGAAYASVPLYRIFCQVTGYGGTTQRVEQYSD- 61
Query: 146 IARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPI 205
T+ + + V+F+A++A+G+PW F P QREV V+ GE+ + Y A N
Sbjct: 62 --------TILDKTIKVRFDANIANGLPWDFKPMQREVTVRIGETTMIKYEAHNLFGEET 113
Query: 206 TGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNL 265
G +++NV P +A YFNK++CFCF + L PGE +++PV F++DPEF DP + + +
Sbjct: 114 YGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLELPVVFFVDPEFVNDPDLKDVKTI 173
Query: 266 ILSYTFFKVNE 276
LSYTFF +++
Sbjct: 174 TLSYTFFPIDK 184
>sp|Q8YFQ7|COXZ_BRUME Cytochrome c oxidase assembly protein CtaG OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=ctaG
PE=3 SV=2
Length = 201
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 13/191 (6%)
Query: 90 SHASTEQKSRK----MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEK 145
E+K R+ + + + M+G+ YA+VPLYR FCQ TGYGGT QR E +
Sbjct: 3 DQGENEKKQRRSNATIAVACLSFFVCMIGAAYASVPLYRIFCQVTGYGGTTQRVEQYSD- 61
Query: 146 IARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPI 205
T+ + + V+F+A++A+G+PW F P QREV V+ GE+ + Y A N
Sbjct: 62 --------TILDKTIKVRFDANIANGLPWDFKPMQREVTVRIGETTMIKYEAHNLFGEET 113
Query: 206 TGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNL 265
G +++NV P +A YFNK++CFCF + L PGE +++PV F++DPEF DP + + +
Sbjct: 114 YGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLELPVVFFVDPEFVNDPDLKDVKTI 173
Query: 266 ILSYTFFKVNE 276
LSYTFF +++
Sbjct: 174 TLSYTFFPIDK 184
>sp|C0RHH8|COXZ_BRUMB Cytochrome c oxidase assembly protein CtaG OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=ctaG PE=3 SV=1
Length = 201
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 13/191 (6%)
Query: 90 SHASTEQKSRK----MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEK 145
E+K R+ + + + M+G+ YA+VPLYR FCQ TGYGGT QR E +
Sbjct: 3 DQGENEKKQRRSNATIAVACLSFFVCMIGAAYASVPLYRIFCQVTGYGGTTQRVEQYSD- 61
Query: 146 IARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPI 205
T+ + + V+F+A++A+G+PW F P QREV V+ GE+ + Y A N
Sbjct: 62 --------TILDKTIKVRFDANIANGLPWDFKPMQREVTVRIGETTMIKYEAHNLFGEET 113
Query: 206 TGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNL 265
G +++NV P +A YFNK++CFCF + L PGE +++PV F++DPEF DP + + +
Sbjct: 114 YGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLELPVVFFVDPEFVNDPDLKDVKTI 173
Query: 266 ILSYTFFKVNE 276
LSYTFF +++
Sbjct: 174 TLSYTFFPIDK 184
>sp|A5VP42|COXZ_BRUO2 Cytochrome c oxidase assembly protein CtaG OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=ctaG PE=3 SV=1
Length = 201
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 114/191 (59%), Gaps = 13/191 (6%)
Query: 90 SHASTEQKSRK----MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEK 145
E+K R+ + + + M+G+ YA+VPLYR FCQ TGYGGT QR E
Sbjct: 3 DQGENEKKQRRSNATIAVACLSFFVCMIGAAYASVPLYRIFCQVTGYGGTTQRVEQYSN- 61
Query: 146 IARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPI 205
T+ + + V+F+A++A+G+PW F P QREV V+ GE+ + Y A N
Sbjct: 62 --------TILDKTIKVRFDANIANGLPWDFKPMQREVTVRIGETTMIKYEAHNLFGEET 113
Query: 206 TGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNL 265
G +++NV P +A YFNK++CFCF + L PGE +++PV F++DPEF DP + + +
Sbjct: 114 YGRASFNVAPGRAGAYFNKVECFCFTDNTLKPGEDLELPVVFFVDPEFVNDPDLKDVKTI 173
Query: 266 ILSYTFFKVNE 276
LSYTFF +++
Sbjct: 174 TLSYTFFPIDK 184
>sp|A6WWG2|COXZ_OCHA4 Cytochrome c oxidase assembly protein CtaG OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ctaG PE=3
SV=1
Length = 203
Score = 164 bits (414), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 16/195 (8%)
Query: 89 ASHASTEQKSRKMLLYLTALVFA-------MVGSTYAAVPLYRRFCQATGYGGTVQRKET 141
A +QK +K + FA M+G+ YA+VPLYR FCQ TGYGGT QR E
Sbjct: 2 ADQQEKDQKLKKQQRSNATIAFACLSFFVCMIGAAYASVPLYRIFCQVTGYGGTTQRVEQ 61
Query: 142 VEEKIARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRS 201
+ T+ + + V+F+A+ A+G+ W F P QREV V+ GE+ + Y A N
Sbjct: 62 YSD---------TILDKTIKVRFDANTANGLAWDFKPVQREVTVRIGETTMIKYEARNLF 112
Query: 202 STPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDG 261
P G +++NV P +A YFNK++CFCF + L PGE ++MPV F++DPE DP +
Sbjct: 113 DQPTYGRASFNVAPGRAGAYFNKVECFCFTDTTLQPGEDMEMPVVFFVDPEIVNDPDLKD 172
Query: 262 INNLILSYTFFKVNE 276
+ + LSYTFF + +
Sbjct: 173 VKTITLSYTFFPIEK 187
>sp|A7IPB8|COXZ_XANP2 Cytochrome c oxidase assembly protein CtaG OS=Xanthobacter
autotrophicus (strain ATCC BAA-1158 / Py2) GN=ctaG PE=3
SV=1
Length = 203
Score = 161 bits (407), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 102/161 (63%), Gaps = 9/161 (5%)
Query: 112 MVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADG 171
MVG TYA+VPLY FC TG+GG + + RE+ ++F+A+VA G
Sbjct: 35 MVGVTYASVPLYAMFCALTGFGGATR---------VGAAPTSAPIEREITIRFDANVAPG 85
Query: 172 MPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFE 231
+PW F P +R+V VK G ++LA YTA NRSS +TYNV+P +A YF K+QCFCF+
Sbjct: 86 LPWAFAPVERDVTVKVGATSLAHYTAANRSSMETHANATYNVSPPQAGAYFVKLQCFCFD 145
Query: 232 EQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFF 272
EQ L P E+++MPV FY+DP DP + + ++ LSYTFF
Sbjct: 146 EQTLAPNEKLEMPVVFYVDPAIAQDPDLKTLTDITLSYTFF 186
>sp|C3MHJ5|COXZ_RHISN Cytochrome c oxidase assembly protein CtaG OS=Rhizobium sp. (strain
NGR234) GN=ctaG PE=3 SV=1
Length = 199
Score = 160 bits (406), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 100/166 (60%), Gaps = 9/166 (5%)
Query: 107 ALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNA 166
A V MVG YAAVPLY FC+ TGY GT QR E + I ++ V F+A
Sbjct: 23 AFVAGMVGMAYAAVPLYDMFCRVTGYNGTTQRVEQASDVILDE---------KIKVTFDA 73
Query: 167 DVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQ 226
+V G+ W F P QR++ V+ GE+ Y A+N SS P TG +T+NVTPM A YFNK+Q
Sbjct: 74 NVGPGLAWDFKPVQRDIDVRIGETVQVMYRAKNLSSKPATGQATFNVTPMAAGAYFNKVQ 133
Query: 227 CFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFF 272
CFCF E L PGE+++MPV F++DPE I L LSYTF+
Sbjct: 134 CFCFTETTLQPGEEMEMPVVFFVDPEIVKPVETKDIKTLTLSYTFY 179
>sp|Q1MKI3|COXZ_RHIL3 Cytochrome c oxidase assembly protein CtaG OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=ctaG PE=3 SV=1
Length = 202
Score = 160 bits (406), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 112/188 (59%), Gaps = 13/188 (6%)
Query: 89 ASHASTEQKSRK----MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEE 144
+ +A T +K + +++ + VF M +YAAVPLYR FCQ TGY GT QR + V
Sbjct: 2 SENAGTPKKQGRNNGAVVMMCLSFVFGMGAMSYAAVPLYRIFCQVTGYNGTTQRVDQV-- 59
Query: 145 KIARHSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTP 204
V R + V F+A+VA G+ W F P +REV K GE+ +TAENRS+
Sbjct: 60 -------SSVVLDRTMRVTFDANVAPGLQWDFKPVEREVNPKIGETIQVNFTAENRSNET 112
Query: 205 ITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINN 264
G + +NVTP +A VYFNK+QCFCF E L PGE++DMPV FYIDPE I+
Sbjct: 113 QRGQAVFNVTPGEAGVYFNKVQCFCFTETDLKPGEKLDMPVVFYIDPEIVKAVESKNIHT 172
Query: 265 LILSYTFF 272
+ LSYTF+
Sbjct: 173 VTLSYTFY 180
>sp|B5ZSV4|COXZ_RHILW Cytochrome c oxidase assembly protein CtaG OS=Rhizobium
leguminosarum bv. trifolii (strain WSM2304) GN=ctaG PE=3
SV=1
Length = 202
Score = 160 bits (406), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 105/172 (61%), Gaps = 9/172 (5%)
Query: 101 MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREV 160
+++ + VF M +YAAVPLYR FCQ TGY GT QR + V V R +
Sbjct: 18 VVMMCLSFVFGMGAMSYAAVPLYRIFCQVTGYNGTTQRVDQV---------SSVVLDRTM 68
Query: 161 VVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAV 220
V F+A+VA G+ W F P +REV K GE+ +TAENRS+ G + +NVTP +A V
Sbjct: 69 RVTFDANVAPGLQWDFKPVEREVNPKIGETIQVHFTAENRSNETQRGQAVFNVTPGEAGV 128
Query: 221 YFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFF 272
YFNK+QCFCF E L PGE++DMPV FYIDPE I+ + LSYTF+
Sbjct: 129 YFNKVQCFCFTETDLKPGEKLDMPVVFYIDPEIVKAVESKDIHTVTLSYTFY 180
>sp|B3PSB4|COXZ_RHIE6 Cytochrome c oxidase assembly protein CtaG OS=Rhizobium etli
(strain CIAT 652) GN=ctaG PE=3 SV=1
Length = 202
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 106/172 (61%), Gaps = 9/172 (5%)
Query: 101 MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREV 160
++L + VF M +YAAVPLYR FCQ TGY GT QR E + V R++
Sbjct: 18 VVLMCLSFVFGMGAMSYAAVPLYRIFCQVTGYNGTTQRVEQM---------SSVVLDRKM 68
Query: 161 VVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAV 220
V F+A+VA G+ W F P +REV + GE+ +TAENRS+ G + +NVTP +A V
Sbjct: 69 RVTFDANVAPGLQWDFKPVEREVNPRIGETIQVKFTAENRSNETQRGQAVFNVTPGEAGV 128
Query: 221 YFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFF 272
YFNK+QCFCF E L PGE+++MPV FYIDPE I+ + LSYTF+
Sbjct: 129 YFNKVQCFCFTETDLKPGEKLEMPVVFYIDPEIVNAVESKDIHTVTLSYTFY 180
>sp|A4Z2D0|COXZ_BRASO Cytochrome c oxidase assembly protein CtaG OS=Bradyrhizobium sp.
(strain ORS278) GN=ctaG PE=3 SV=1
Length = 219
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 107 ALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNA 166
A+V M+G++YAAVP Y FC+ATG+ GT Q +A + R + V+F+A
Sbjct: 40 AVVVLMIGASYAAVPFYNWFCRATGFNGTTQ--------VATAAPSAAPLARRIGVRFDA 91
Query: 167 DVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQ 226
+VA G+PWKF P + E+ V GE +YT N+S+ + YNVTP+ + YF KI
Sbjct: 92 NVAGGLPWKFEPEKTEIEVAIGEVVTVYYTVTNQSARTTMAQAAYNVTPLTSGAYFQKIN 151
Query: 227 CFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNE 276
CFCF EQ + PGE +MPV FY+DP D DG+N + LSYTF+ V +
Sbjct: 152 CFCFTEQTMAPGETREMPVVFYVDPAITADHENDGLNTITLSYTFYPVRD 201
>sp|Q1QHV9|COXZ_NITHX Cytochrome c oxidase assembly protein CtaG OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=ctaG1 PE=3 SV=1
Length = 216
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 104/169 (61%), Gaps = 8/169 (4%)
Query: 108 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNAD 167
LV MVG+ YAAVP Y FC+ATG+ GT Q +A+ + R V V+F+++
Sbjct: 38 LVALMVGAAYAAVPFYNWFCRATGFNGTTQ--------VAKVAPSAAPLARTVAVRFDSN 89
Query: 168 VADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQC 227
++ G+PWKF P Q E+ V+ GE A +YT N ++T TG + YNVTP+ YF KI C
Sbjct: 90 ISGGLPWKFEPEQTEINVRIGEVATVYYTVTNHAATATTGQAAYNVTPLTVGSYFTKINC 149
Query: 228 FCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNE 276
FCF EQ L PGE+ +M V FY+DP F D DG+ + LSYTFF V +
Sbjct: 150 FCFTEQTLAPGEKREMAVVFYVDPSFAADSENDGVRTITLSYTFFPVKD 198
>sp|Q5HA73|COXZ_EHRRW Cytochrome c oxidase assembly protein CtaG OS=Ehrlichia ruminantium
(strain Welgevonden) GN=ctaG PE=3 SV=1
Length = 177
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 99/161 (61%), Gaps = 9/161 (5%)
Query: 117 YAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGMPWKF 176
YA+VPLY FC+ TGYGGTV+ + K+ + + + ++FNAD+ +PWKF
Sbjct: 24 YASVPLYSIFCKVTGYGGTVRTATATQSKLGKTT---------IKIRFNADINKELPWKF 74
Query: 177 IPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLL 236
P VKPGE L FY AEN ++ ++G++ YNVTP K YFNK+ CFCF +Q L
Sbjct: 75 YPEIPYTTVKPGEQKLIFYRAENLTNEYVSGMAVYNVTPYKVGKYFNKVACFCFTKQTLS 134
Query: 237 PGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNED 277
P ++ MPV F+IDP ETDP + + LSYTFFK E+
Sbjct: 135 PYQKTIMPVSFFIDPNIETDPETSDVKLITLSYTFFKYKEN 175
>sp|Q2KBM0|COXZ_RHIEC Cytochrome c oxidase assembly protein CtaG OS=Rhizobium etli
(strain CFN 42 / ATCC 51251) GN=ctaG PE=3 SV=1
Length = 202
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 104/172 (60%), Gaps = 9/172 (5%)
Query: 101 MLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREV 160
+++ + VF M +YAAVPLYR FCQ TGY GT QR E + V R++
Sbjct: 18 VVMMCLSFVFGMGAMSYAAVPLYRIFCQVTGYNGTTQRVEQM---------SSVVLDRKM 68
Query: 161 VVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAV 220
V F+A+VA G+ W F P +REV K GE+ + AEN+S+ G + +NVTP +A
Sbjct: 69 RVTFDANVAPGLQWNFKPVEREVNPKIGETIQVNFVAENKSNETQRGQAVFNVTPGEAGA 128
Query: 221 YFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFF 272
YFNK+QCFCF E L PGE+++MPV FYIDPE I+ + LSYTF+
Sbjct: 129 YFNKVQCFCFTETDLKPGEKLEMPVVFYIDPEIVKAVESKDIHTVTLSYTFY 180
>sp|Q5FGG9|COXZ_EHRRG Cytochrome c oxidase assembly protein CtaG OS=Ehrlichia ruminantium
(strain Gardel) GN=ctaG PE=3 SV=1
Length = 177
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 98/160 (61%), Gaps = 9/160 (5%)
Query: 117 YAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADGMPWKF 176
YA+VPLY FC+ TGYGGTV+ + K+ + + + ++FNAD+ +PWKF
Sbjct: 24 YASVPLYSIFCKVTGYGGTVRTATVTQSKLGKTT---------IKIRFNADINKELPWKF 74
Query: 177 IPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLL 236
P VKPGE L FY AEN ++ ++G++ YNVTP K YFNK+ CFCF +Q L
Sbjct: 75 YPEIPYTTVKPGEQKLIFYRAENLTNEYVSGMAVYNVTPYKVGKYFNKVACFCFTKQTLS 134
Query: 237 PGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNE 276
P ++ MPV F+IDP ETDP + + LSYTFFK E
Sbjct: 135 PYQKTIMPVSFFIDPNIETDPETSDVKLITLSYTFFKYKE 174
>sp|P56939|COXZ_BRAJA Cytochrome c oxidase assembly protein CtaG OS=Bradyrhizobium
japonicum (strain USDA 110) GN=ctaG PE=3 SV=1
Length = 214
Score = 154 bits (390), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 107 ALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNA 166
+V MVG++YAAVP Y FC+ATG+ GT Q +A + R++ V+F++
Sbjct: 35 GVVALMVGASYAAVPFYNWFCRATGFNGTTQ--------VATAAPATGPIARKIAVRFDS 86
Query: 167 DVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQ 226
+VA G+PWKF P Q E+ V G+ FYT N+++ G + YNV P+ YF KI
Sbjct: 87 NVAPGLPWKFEPEQSEIEVNIGQVTTVFYTVTNQAARTTAGQAAYNVAPLTVGSYFQKIN 146
Query: 227 CFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNE 276
CFCF EQ + PGE+ +MPV FY+DP D DG++ + LSYTF+ V +
Sbjct: 147 CFCFTEQTMAPGEKREMPVVFYVDPSIADDHENDGLSTITLSYTFYPVKD 196
>sp|Q8UHB2|COXZ_AGRT5 Cytochrome c oxidase assembly protein CtaG OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=ctaG PE=3 SV=2
Length = 202
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 110/184 (59%), Gaps = 10/184 (5%)
Query: 90 SHASTEQKSRKMLLYLTALVF-AMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIAR 148
+ A +++ S + +L L + F AM+G YAAVPLY FC+ TGY GT QR E + I
Sbjct: 6 ARAGSQRVSNRSILVLCLVFFCAMIGMAYAAVPLYSLFCRVTGYNGTTQRVEQYSDVIL- 64
Query: 149 HSKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGV 208
D T+ V F+A+ ++G+ W F P + V+ K GE+ + A NRS TG
Sbjct: 65 ---DKTIN-----VTFDANTSNGLNWDFRPVDKMVKPKIGETIKVTFKATNRSPVATTGT 116
Query: 209 STYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILS 268
+ +NVTPM+A YFNK++CFCF E L PGE ++MPV F++DP+ T ++ L LS
Sbjct: 117 AVFNVTPMEAGAYFNKVECFCFTETTLQPGETLEMPVVFFVDPDIATARETKSVHTLTLS 176
Query: 269 YTFF 272
YTF+
Sbjct: 177 YTFY 180
>sp|Q11KD0|COXZ_MESSB Cytochrome c oxidase assembly protein CtaG OS=Mesorhizobium sp.
(strain BNC1) GN=ctaG PE=3 SV=1
Length = 202
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 115/188 (61%), Gaps = 10/188 (5%)
Query: 90 SHASTEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARH 149
S + ++++R + + AMVG ++AAVPLYR FCQ TGYGGT QR E +
Sbjct: 8 SEVTRDRRNRGVAFVCAGVFVAMVGMSFAAVPLYRLFCQVTGYGGTTQRVEQYSD----- 62
Query: 150 SKDGTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVS 209
T+ R + V+F+A+ + G+PW+F P QRE+ ++ GE+ Y A N + T TG +
Sbjct: 63 ----TILDRTINVRFDANTS-GVPWEFKPKQREITLRIGETTEIAYVARNNAPTTTTGTA 117
Query: 210 TYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSY 269
TYNV P A YFNKI+CFCF +Q L PG+ +MPV F++DPE P + + + LSY
Sbjct: 118 TYNVAPALAGAYFNKIECFCFTKQSLEPGQTYEMPVQFFVDPEIVNVPELKNLKTITLSY 177
Query: 270 TFFKVNED 277
TF+ N++
Sbjct: 178 TFYPNNQE 185
>sp|Q167V9|COXZ_ROSDO Cytochrome c oxidase assembly protein CtaG OS=Roseobacter
denitrificans (strain ATCC 33942 / OCh 114) GN=ctaG PE=3
SV=1
Length = 194
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 9/176 (5%)
Query: 100 KMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTRE 159
K + ++V M +A+VPLY FC+ TG+GG + E I D T+T R
Sbjct: 8 KTVAQTVSVVIFMGALAWASVPLYDWFCRVTGFGGVTGVSDVAPEDIL----DQTITIR- 62
Query: 160 VVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAA 219
F+ + + MPW+F P RE+ V+ GES LAFY A N + P+ G ++YNVTP +A
Sbjct: 63 ----FDGSLNNHMPWEFKPVVREMDVRIGESGLAFYEAYNPTDRPVAGSASYNVTPYQAG 118
Query: 220 VYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVN 275
+FNKIQCFCFEEQ L PGE++ MPV FY+DPE D ++ + LSYTF++++
Sbjct: 119 GFFNKIQCFCFEEQVLQPGERVQMPVTFYVDPEIVDDRDGKHVHTITLSYTFYEID 174
>sp|Q20X23|COXZ_RHOPB Cytochrome c oxidase assembly protein CtaG OS=Rhodopseudomonas
palustris (strain BisB18) GN=ctaG PE=3 SV=1
Length = 206
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 100/167 (59%), Gaps = 9/167 (5%)
Query: 108 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNAD 167
+V MVG++YAAVP Y FC+ATG+ GT Q +A + R++ V+F+++
Sbjct: 29 VVALMVGASYAAVPFYNWFCRATGFNGTTQ--------VATAAPIAAPLPRKITVRFDSN 80
Query: 168 VADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQC 227
V +G+PWKF P Q E+ + G+ FYT N S+ TG + YNV P+ YF KI C
Sbjct: 81 V-NGLPWKFTPEQTEIEIPIGQVVTVFYTVTNLSAHETTGQAAYNVAPLTVGAYFQKINC 139
Query: 228 FCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKV 274
FCF EQ GE +MPV FY+DP DP DG+N++ LSYTF+ V
Sbjct: 140 FCFTEQTFAAGETREMPVVFYVDPALAADPENDGLNSITLSYTFYPV 186
>sp|A5EAA0|COXZ_BRASB Cytochrome c oxidase assembly protein CtaG OS=Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182) GN=ctaG PE=3 SV=1
Length = 216
Score = 150 bits (379), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 98/169 (57%), Gaps = 8/169 (4%)
Query: 108 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNAD 167
+V MVG++YAAVP Y FC+ATG+ GT Q +A + R + V+F+ +
Sbjct: 39 VVVLMVGASYAAVPFYNWFCRATGFNGTTQ--------VATSAPTSAPLARRIAVRFDTN 90
Query: 168 VADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQC 227
VA G+PWKF + E+ V GE +YT N+S+ + YNVTP+ + VYF KI C
Sbjct: 91 VAGGLPWKFEAEKTEIEVAIGEVVTVYYTVTNQSARTTMAQAAYNVTPLTSGVYFQKINC 150
Query: 228 FCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNE 276
FCF EQ + PGE +MPV FY+DP D D + + LSYTF+ V E
Sbjct: 151 FCFTEQTMAPGETREMPVVFYVDPAITADHENDSLKTITLSYTFYPVRE 199
>sp|Q1GE51|COXZ_RUEST Cytochrome c oxidase assembly protein CtaG OS=Ruegeria sp. (strain
TM1040) GN=ctaG PE=3 SV=1
Length = 195
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 101/164 (61%), Gaps = 9/164 (5%)
Query: 112 MVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADG 171
M G +A+VP Y FC+ TG+GG Q ET +++ + + V+F+A G
Sbjct: 20 MGGLAWASVPFYDWFCRVTGFGGVTQVAETGSDQVLDQT---------IKVRFDASKDRG 70
Query: 172 MPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFE 231
MPW+F P +R + +K GE+ LAFY A N + P+ G ++YNV P A YF+KIQCFCF
Sbjct: 71 MPWEFKPVERIMELKIGETGLAFYEAYNPTDRPVAGQASYNVAPFSAGYYFDKIQCFCFN 130
Query: 232 EQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVN 275
EQ L PGE++ MPV F++DPE DP ++ + LSYTF +++
Sbjct: 131 EQVLQPGERVMMPVTFFVDPEIIEDPEAKYVHTITLSYTFHEID 174
>sp|Q13CY3|COXZ_RHOPS Cytochrome c oxidase assembly protein CtaG OS=Rhodopseudomonas
palustris (strain BisB5) GN=ctaG PE=3 SV=1
Length = 206
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 100/169 (59%), Gaps = 9/169 (5%)
Query: 108 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNAD 167
+V MVG+++AAVP Y FC+ TG+ GT Q +A + R+V V+F+++
Sbjct: 29 VVALMVGASFAAVPFYDWFCRTTGFNGTTQ--------VAGSAPSSEPLARKVSVRFDSN 80
Query: 168 VADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQC 227
+ +G+PWKF P QREV V G+ +Y+ N S TG + YNVTP+ YF KI C
Sbjct: 81 I-NGLPWKFEPEQREVEVAIGQVVTVYYSVTNTSKRATTGQAAYNVTPLTVGSYFTKINC 139
Query: 228 FCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNE 276
FCF EQ L GE +MPV FY+DP F D D + N+ LSYTF+ V E
Sbjct: 140 FCFTEQTLAAGETREMPVVFYVDPAFAADNENDTVKNITLSYTFYPVRE 188
>sp|Q2IR93|COXZ_RHOP2 Cytochrome c oxidase assembly protein CtaG OS=Rhodopseudomonas
palustris (strain HaA2) GN=ctaG PE=3 SV=1
Length = 208
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 99/169 (58%), Gaps = 9/169 (5%)
Query: 108 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNAD 167
+V MVG+++AAVP Y FC+ TG+ GT Q +A + R+V V+F+++
Sbjct: 31 VVALMVGASFAAVPFYNWFCRTTGFNGTTQ--------VAGVAPSSAPLARKVAVRFDSN 82
Query: 168 VADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQC 227
+ +G+PW F P QRE+ V G+ A+Y+ N + TG + YNVTP+ YF KI C
Sbjct: 83 I-NGLPWTFEPEQREIEVAIGQVFTAYYSVTNTAKHATTGQAAYNVTPLTVGSYFTKINC 141
Query: 228 FCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNE 276
FCF EQ L GE +MPV FY+DP F D D + + LSYTF+ V E
Sbjct: 142 FCFTEQTLAAGETREMPVVFYVDPSFAADSENDAVKTITLSYTFYPVRE 190
>sp|Q5LNX9|COXZ_RUEPO Cytochrome c oxidase assembly protein CtaG OS=Ruegeria pomeroyi
(strain ATCC 700808 / DSM 15171 / DSS-3) GN=ctaG PE=3
SV=1
Length = 191
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 100/164 (60%), Gaps = 9/164 (5%)
Query: 112 MVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNADVADG 171
M G +A+VP Y FC+ TG+GG +A D T+ + + V+F+A G
Sbjct: 20 MGGLAWASVPFYDWFCRVTGFGGAT--------GVAEAGSD-TILDKTIKVRFDASKERG 70
Query: 172 MPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQCFCFE 231
MPW+F P Q E+ ++ GE+ LAFY A N + P+ G ++YNV P A YF+KI CFCFE
Sbjct: 71 MPWEFRPVQTEMELRIGETGLAFYEAYNPTDRPVAGQASYNVAPYSAGGYFDKIACFCFE 130
Query: 232 EQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVN 275
EQ L PGE++ MPV F++DPE D ++ + LSYTF++++
Sbjct: 131 EQVLQPGERVQMPVTFFVDPEIVNDRDAKYVHTITLSYTFYEID 174
>sp|P56940|COXZ_RHOSH Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides GN=ctaG PE=1 SV=1
Length = 191
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 105/179 (58%), Gaps = 12/179 (6%)
Query: 93 STEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKD 152
S QK+ L+ + A+ M +++AAVP Y FC+ TG+ GT +A +
Sbjct: 4 SPHQKTAGGLVLVVAV---MGAASFAAVPFYNWFCRVTGFAGTT--------AVATEAP- 51
Query: 153 GTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYN 212
V R V V+F+A GMPW+F P QRE+++K GE+ LAFY A N + + G ++YN
Sbjct: 52 AEVLDRTVKVRFDASREAGMPWEFRPLQREMKLKIGETGLAFYEAYNPTDRTVAGTASYN 111
Query: 213 VTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTF 271
VTP A YF KI CFCF EQ L PGE+++MPV FY+DP DP + + LSYTF
Sbjct: 112 VTPDAAGGYFAKIACFCFTEQVLAPGERVEMPVTFYVDPAIIDDPDGRYVRQITLSYTF 170
>sp|Q3J5F7|COXZ_RHOS4 Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=ctaG PE=3 SV=1
Length = 191
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 105/179 (58%), Gaps = 12/179 (6%)
Query: 93 STEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKD 152
S QK+ L+ + A+ M +++AAVP Y FC+ TG+ GT +A +
Sbjct: 4 SPHQKTAGGLVLVVAV---MGAASFAAVPFYNWFCRVTGFAGTT--------AVATEAP- 51
Query: 153 GTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYN 212
V R V V+F+A GMPW+F P QRE+++K GE+ LAFY A N + + G ++YN
Sbjct: 52 AEVLDRTVKVRFDASREAGMPWEFRPLQREMKLKIGETGLAFYEAYNPTDRTVAGTASYN 111
Query: 213 VTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTF 271
VTP A YF KI CFCF EQ L PGE+++MPV FY+DP DP + + LSYTF
Sbjct: 112 VTPDAAGGYFAKIACFCFTEQVLAPGERVEMPVTFYVDPAIIDDPDGRYVRQITLSYTF 170
>sp|A1BA38|COXZ_PARDP Cytochrome c oxidase assembly protein CtaG OS=Paracoccus
denitrificans (strain Pd 1222) GN=ctaG PE=3 SV=1
Length = 195
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 96 QKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTV 155
+ + + + L +V M ++AAVP Y FC+ TG+ GT E + TV
Sbjct: 7 RSNTRTVAMLAGVVVLMGALSWAAVPFYSWFCKVTGFAGTTNVAEAASD---------TV 57
Query: 156 TTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTP 215
++ V+F+A+ + W F P QRE+ +K GE+A+AFY A N + P+TG ++YNV P
Sbjct: 58 LDEKIRVRFDANADSNLGWTFRPMQREMELKIGENAIAFYEAINNTDEPVTGTASYNVAP 117
Query: 216 MKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVN 275
A +FNKI+CFCF EQ L PGE+++MPV F++D + D I ++ LSYTF + +
Sbjct: 118 DAAGYFFNKIECFCFTEQTLQPGERVEMPVSFFVDADLVNDRDAGRIRDITLSYTFHRTD 177
>sp|A3PGX7|COXZ_RHOS1 Cytochrome c oxidase assembly protein CtaG OS=Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=ctaG PE=3
SV=1
Length = 191
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 105/181 (58%), Gaps = 12/181 (6%)
Query: 93 STEQKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKD 152
S QK+ L+ + A+ M +++AAVP Y FC+ TG+ GT +A +
Sbjct: 4 SPHQKTAGGLVLVVAV---MGAASFAAVPFYNWFCRVTGFAGTT--------AVATEAP- 51
Query: 153 GTVTTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYN 212
V R V V+F+A GMPW+F P QRE+ +K GE+ LAFY A N + + G ++YN
Sbjct: 52 AEVLDRTVKVRFDASREAGMPWEFRPLQREMELKIGETGLAFYEAYNPTDRTVAGTASYN 111
Query: 213 VTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFF 272
VTP A YF KI CFCF EQ L PGE+++MPV FY+DP DP + + LSYTF
Sbjct: 112 VTPDAAGGYFAKIACFCFTEQVLAPGERVEMPVTFYVDPAIIDDPDGRYVRQITLSYTFH 171
Query: 273 K 273
+
Sbjct: 172 E 172
>sp|B3QF26|COXZ_RHOPT Cytochrome c oxidase assembly protein CtaG OS=Rhodopseudomonas
palustris (strain TIE-1) GN=ctaG PE=3 SV=1
Length = 208
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 95/169 (56%), Gaps = 9/169 (5%)
Query: 108 LVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTVTTREVVVQFNAD 167
+V MVG+++AAVP Y FC+ TG+ GT Q +A R V V F+++
Sbjct: 31 VVALMVGASFAAVPFYNWFCRTTGFNGTTQ--------VAHAVPSSAPLDRTVTVSFDSN 82
Query: 168 VADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAVYFNKIQC 227
V +G+PWKF P QRE+ V G+ +Y N S + G + YNVTP+ YF KI C
Sbjct: 83 V-NGLPWKFEPEQREIEVPIGKVVTVYYRITNLSRSDTVGQAAYNVTPLTVGSYFTKINC 141
Query: 228 FCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVNE 276
FCF EQ L GE DMPV FYIDP F D D + + LSYT++ V +
Sbjct: 142 FCFTEQPLAAGESRDMPVVFYIDPAFAADSENDTVKTITLSYTYYPVRD 190
>sp|P08303|COXZ_PARDE Cytochrome c oxidase assembly protein CtaG OS=Paracoccus
denitrificans GN=ctaG PE=3 SV=1
Length = 194
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 10/180 (5%)
Query: 96 QKSRKMLLYLTALVFAMVGSTYAAVPLYRRFCQATGYGGTVQRKETVEEKIARHSKDGTV 155
+ + + + L +V M ++AAVP Y FC+ TG+ GT E + TV
Sbjct: 7 RSNTRTVAMLAGVVVLMGALSWAAVPFYSWFCKVTGFAGTTNVAEAASD---------TV 57
Query: 156 TTREVVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTP 215
++ V+F+A+ + W F P QRE+ +K GE+A+AFY A N + P+TG ++YNV P
Sbjct: 58 LDEKIRVRFDANADSNLGWTFRPMQREMELKIGENAIAFYEAINNTDEPVTGTASYNVAP 117
Query: 216 MKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVN 275
A +FNKI+CFCF EQ L PGE+++MPV F++D + D R I ++ LSYTF + +
Sbjct: 118 DAAGYFFNKIECFCFTEQTLQPGERVEMPVSFFVDADLVND-RDAVIRDITLSYTFHRTD 176
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,312,661
Number of Sequences: 539616
Number of extensions: 4021778
Number of successful extensions: 8060
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7953
Number of HSP's gapped (non-prelim): 58
length of query: 277
length of database: 191,569,459
effective HSP length: 116
effective length of query: 161
effective length of database: 128,974,003
effective search space: 20764814483
effective search space used: 20764814483
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)