BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023784
         (277 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6NLW5|XRI1_ARATH Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2
          Length = 300

 Score =  265 bits (677), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 144/270 (53%), Positives = 186/270 (68%), Gaps = 6/270 (2%)

Query: 8   EVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQFDT 67
           EV LN ED SYM DDE TPVKAC +L YH T   + +++ +   ET S +KRRRMLQF+ 
Sbjct: 37  EVTLNQEDHSYMFDDENTPVKACSELGYHVT-TEDTNRKMEVHSETRSALKRRRMLQFED 95

Query: 68  QVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSAGVSASSCDGTDQSLEGWI 127
           Q  ++SL S E  S  LKS+ R ++ +E+LPE SQ    FS   SASS +G D   E W 
Sbjct: 96  QP-ETSLFSSESFSAILKSSARDDTFDELLPEGSQLIEGFSEDASASSFEGLDLYAEEWY 154

Query: 128 SECLNDPEMNFSTDELLRDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFR 187
           ++CLND E     D+L  +F G+ D+Q+DISE+ N PP  +   + Q+  T++  NV+F+
Sbjct: 155 ADCLNDAETPMLPDDL--NF-GSPDVQVDISEYLNVPPETETREV-QRPVTRSSPNVIFK 210

Query: 188 GRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTEDPSAYPK 247
           GRKS  R  +KL SS+ YPFAFIKPCGVHG +TLKDINQ+I +P +  + + E+P+    
Sbjct: 211 GRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAHIEEPAVIQT 270

Query: 248 SAFSGKPVVGKTKIRTEGGKGSITIMRTKG 277
           SAFSGKPVVGKTKIRTEGGKGSITIMRT+G
Sbjct: 271 SAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300


>sp|Q923B6|STEA4_MOUSE Metalloreductase STEAP4 OS=Mus musculus GN=Steap4 PE=2 SV=1
          Length = 470

 Score = 34.7 bits (78), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 180 TPHNVVFRGRKSLIRTPTKLASSV--AYPFAFIKPCGVHGDITLKDINQR--IHSPASTL 235
           T H +V+ G++ L  +P+ L  S+  AY  A + PC V   + LK I     I    + +
Sbjct: 395 TAHTLVYGGKRFL--SPSILRWSLPSAYILALVIPCAV---LVLKCILIMPCIDKTLTRI 449

Query: 236 RQNTEDPSAYPKSAFSGK 253
           RQ  E  S Y +SA +GK
Sbjct: 450 RQGWERNSKYTQSALNGK 467


>sp|B6YQF6|SYE_AZOPC Glutamate--tRNA ligase OS=Azobacteroides pseudotrichonymphae
           genomovar. CFP2 GN=gltX PE=3 SV=1
          Length = 494

 Score = 32.3 bits (72), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 133 DPEMNFSTDELLRDFSGASDIQID---ISEFSNSPPAYDDANILQQHCTKTPHNVVFRGR 189
           DP      ++L+R     S   +D   + + S++ P Y  ANI+  H  K  H  V RG 
Sbjct: 153 DPNQTIIVNDLIRGEMSISSSTLDDKVLYKSSDNLPTYHLANIVDDHLMKITH--VIRGE 210

Query: 190 KSLIRTPTKLASSVAYPFAFIKPCGVHGDITLK 222
           + L  TP  +     + +    P   H  + LK
Sbjct: 211 EWLSSTPLHIILYQYFGWGEKMPVFAHLPLLLK 243


>sp|A4STE1|G6PI_AERS4 Glucose-6-phosphate isomerase OS=Aeromonas salmonicida (strain
           A449) GN=pgi PE=3 SV=1
          Length = 549

 Score = 31.6 bits (70), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 6   WNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQF 65
           W E   NG+   Y L  + T +  C  LA   +HN      PK     ++Q         
Sbjct: 377 WGEPGTNGQHAFYQLIHQGTKLIPCDFLAPAISHNPIGDHHPKLLANFFAQ--------- 427

Query: 66  DTQVVDSSLCSDEMPSPFLKSNERGESVEEVLP 98
            T+ +      +++ + FL + +  E VE+++P
Sbjct: 428 -TEALAFGKSKEQVEAEFLAAGKTLEQVEDLVP 459


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.129    0.380 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,376,037
Number of Sequences: 539616
Number of extensions: 4375818
Number of successful extensions: 8655
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 8647
Number of HSP's gapped (non-prelim): 18
length of query: 277
length of database: 191,569,459
effective HSP length: 116
effective length of query: 161
effective length of database: 128,974,003
effective search space: 20764814483
effective search space used: 20764814483
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)