Query 023784
Match_columns 277
No_of_seqs 62 out of 64
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 12:44:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023784.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023784hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d5va_ a.4.5.14 (A:) Adipocyt 20.5 22 0.0016 25.7 2.0 18 214-231 20-37 (94)
2 d2cyua1 a.9.1.1 (A:2-40) E3-bi 11.9 44 0.0032 20.6 1.5 22 206-227 15-36 (39)
3 d2nqwa1 d.145.1.4 (A:4-90) Hyp 11.4 46 0.0033 22.7 1.6 26 206-231 2-29 (87)
4 d1w85i_ a.9.1.1 (I:) E3/E1 bin 9.9 60 0.0043 20.3 1.6 21 208-228 20-40 (42)
5 d2o3ga1 d.145.1.4 (A:180-255) 8.8 44 0.0032 22.4 0.6 17 215-231 5-21 (76)
6 d2rk5a1 d.145.1.4 (A:5-88) Put 8.6 55 0.004 22.0 1.1 17 215-231 10-26 (84)
7 d2p13a1 d.145.1.4 (A:431-515) 8.4 57 0.0041 22.1 1.1 17 215-231 15-31 (85)
8 d2c6ya1 a.4.5.14 (A:1-98) Inte 7.6 76 0.0055 22.8 1.6 19 213-231 18-36 (98)
9 d1uqra_ c.23.13.1 (A:) Type II 7.4 70 0.0051 24.7 1.3 17 215-231 22-38 (146)
10 d2o1ra1 d.145.1.4 (A:1-78) Hyp 7.3 68 0.005 21.4 1.1 17 215-231 10-26 (78)
No 1
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.54 E-value=22 Score=25.71 Aligned_cols=18 Identities=33% Similarity=0.266 Sum_probs=14.9
Q ss_pred CccCCcchHhHHhhhcCC
Q 023784 214 GVHGDITLKDINQRIHSP 231 (277)
Q Consensus 214 g~~gd~TL~DIN~ri~~~ 231 (277)
.-+|.+||+||.+.|...
T Consensus 20 sp~~~ltL~eIY~~i~~~ 37 (94)
T d1d5va_ 20 APEKKITLNGIYQFIMDR 37 (94)
T ss_dssp CSSSSBCHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHH
Confidence 457889999999999754
No 2
>d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=11.94 E-value=44 Score=20.61 Aligned_cols=22 Identities=32% Similarity=0.469 Sum_probs=18.0
Q ss_pred eeeeeccCCccCCcchHhHHhh
Q 023784 206 PFAFIKPCGVHGDITLKDINQR 227 (277)
Q Consensus 206 PF~~vKP~g~~gd~TL~DIN~r 227 (277)
-.+.|++.|.+|-||-.||=+-
T Consensus 15 dl~~i~GtG~~GRI~k~Dv~~~ 36 (39)
T d2cyua1 15 DASAIKGTGVGGRLTREDVEKH 36 (39)
T ss_dssp CGGGSCCCSSSSCCCHHHHHHH
T ss_pred CHHHCcCCCCCCcEeHHHHHHH
Confidence 3457899999999999998543
No 3
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=11.43 E-value=46 Score=22.67 Aligned_cols=26 Identities=23% Similarity=0.484 Sum_probs=19.8
Q ss_pred eeeeeccC--CccCCcchHhHHhhhcCC
Q 023784 206 PFAFIKPC--GVHGDITLKDINQRIHSP 231 (277)
Q Consensus 206 PF~~vKP~--g~~gd~TL~DIN~ri~~~ 231 (277)
||..+-.+ -++|.++|.|+|+.+-..
T Consensus 2 p~~ki~d~~~~v~G~~~l~dl~~~l~~~ 29 (87)
T d2nqwa1 2 PFKVLGDGSYLFEGKTSLSDVRHYLDLP 29 (87)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHTCC
T ss_pred CeEEECCCEEEEEEeCCHHHHHHHhCCC
Confidence 55555555 468999999999998654
No 4
>d1w85i_ a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=9.93 E-value=60 Score=20.33 Aligned_cols=21 Identities=19% Similarity=0.438 Sum_probs=17.6
Q ss_pred eeeccCCccCCcchHhHHhhh
Q 023784 208 AFIKPCGVHGDITLKDINQRI 228 (277)
Q Consensus 208 ~~vKP~g~~gd~TL~DIN~ri 228 (277)
+.|++.|.+|-||-.||-+-|
T Consensus 20 ~~i~GTG~~GRItk~DV~~~i 40 (42)
T d1w85i_ 20 RLVQGTGKNGRVLKEDIDAFL 40 (42)
T ss_dssp TTSCCCSGGGCCCHHHHHHHH
T ss_pred HHCccCCCCCcEeHHHHHHHh
Confidence 468999999999999996544
No 5
>d2o3ga1 d.145.1.4 (A:180-255) Putative protein NMB1485 {Neisseria meningitidis [TaxId: 487]}
Probab=8.83 E-value=44 Score=22.38 Aligned_cols=17 Identities=18% Similarity=0.532 Sum_probs=15.0
Q ss_pred ccCCcchHhHHhhhcCC
Q 023784 215 VHGDITLKDINQRIHSP 231 (277)
Q Consensus 215 ~~gd~TL~DIN~ri~~~ 231 (277)
++|.++|.|+|+.+-.+
T Consensus 5 vdG~~~i~dl~~~l~~~ 21 (76)
T d2o3ga1 5 VEGALEYVELAPQLNLP 21 (76)
T ss_dssp EETTCBHHHHTTTTTCC
T ss_pred EEcCCCHHHHHHHHCcC
Confidence 68999999999998765
No 6
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=8.64 E-value=55 Score=21.95 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=15.0
Q ss_pred ccCCcchHhHHhhhcCC
Q 023784 215 VHGDITLKDINQRIHSP 231 (277)
Q Consensus 215 ~~gd~TL~DIN~ri~~~ 231 (277)
++|.++|.|+|+.+-..
T Consensus 10 v~G~~~l~dl~~~l~~~ 26 (84)
T d2rk5a1 10 VLGTMTLNDFNEYFETD 26 (84)
T ss_dssp EETTSBHHHHHHHHTCC
T ss_pred EEeeeEHHHHHHHhCCC
Confidence 67999999999999765
No 7
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=8.42 E-value=57 Score=22.10 Aligned_cols=17 Identities=12% Similarity=0.311 Sum_probs=14.8
Q ss_pred ccCCcchHhHHhhhcCC
Q 023784 215 VHGDITLKDINQRIHSP 231 (277)
Q Consensus 215 ~~gd~TL~DIN~ri~~~ 231 (277)
++|.++|.|+|+.+-..
T Consensus 15 v~G~~~l~dl~~~l~~~ 31 (85)
T d2p13a1 15 MDGWISIRKASNLLEHD 31 (85)
T ss_dssp EETTSBHHHHHHHHTSC
T ss_pred EEecCCHHHHHHHHCCC
Confidence 68999999999998654
No 8
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.65 E-value=76 Score=22.78 Aligned_cols=19 Identities=21% Similarity=0.253 Sum_probs=15.4
Q ss_pred CCccCCcchHhHHhhhcCC
Q 023784 213 CGVHGDITLKDINQRIHSP 231 (277)
Q Consensus 213 ~g~~gd~TL~DIN~ri~~~ 231 (277)
...+|.+||+||.+.|...
T Consensus 18 ~sp~~~ltL~eIy~~i~~~ 36 (98)
T d2c6ya1 18 MAPDKQLTLNGIYTHITKN 36 (98)
T ss_dssp TSTTSCEEHHHHHHHHHHH
T ss_pred hCCCCCccHHHHHHHHHHh
Confidence 3467889999999999654
No 9
>d1uqra_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Actinobacillus pleuropneumoniae [TaxId: 715]}
Probab=7.41 E-value=70 Score=24.69 Aligned_cols=17 Identities=35% Similarity=0.593 Sum_probs=14.0
Q ss_pred ccCCcchHhHHhhhcCC
Q 023784 215 VHGDITLKDINQRIHSP 231 (277)
Q Consensus 215 ~~gd~TL~DIN~ri~~~ 231 (277)
.-|.+||.|||+++..-
T Consensus 22 iYG~~TL~~i~~~~~~~ 38 (146)
T d1uqra_ 22 IYGSQTLSDIEQHLQQS 38 (146)
T ss_dssp GTTCCCHHHHHHHHHHH
T ss_pred cCCccCHHHHHHHHHHH
Confidence 56889999999998643
No 10
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=7.35 E-value=68 Score=21.37 Aligned_cols=17 Identities=24% Similarity=0.520 Sum_probs=14.9
Q ss_pred ccCCcchHhHHhhhcCC
Q 023784 215 VHGDITLKDINQRIHSP 231 (277)
Q Consensus 215 ~~gd~TL~DIN~ri~~~ 231 (277)
++|.++|.|+|+.+-..
T Consensus 10 v~G~~~l~dl~~~l~~~ 26 (78)
T d2o1ra1 10 IDGSANLRDLNKMFNWE 26 (78)
T ss_dssp EETTCBHHHHHHHHCCC
T ss_pred EEeeCCHHHHHHHHCCC
Confidence 57999999999998765
Done!