Query 023786
Match_columns 277
No_of_seqs 227 out of 2036
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 12:46:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023786.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023786hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tqd_A 3-deoxy-manno-octuloson 100.0 2.7E-39 9.3E-44 287.4 22.4 223 48-271 8-237 (256)
2 4fcu_A 3-deoxy-manno-octuloson 100.0 3.3E-38 1.1E-42 280.0 22.1 222 50-272 2-230 (253)
3 3k8d_A 3-deoxy-manno-octuloson 100.0 2.8E-38 9.7E-43 282.0 19.5 225 43-269 12-242 (264)
4 3oam_A 3-deoxy-manno-octuloson 100.0 1.4E-37 4.9E-42 275.2 18.4 220 48-269 1-226 (252)
5 1h7e_A 3-deoxy-manno-octuloson 100.0 2E-29 6.9E-34 220.5 23.4 217 48-270 1-218 (245)
6 1vic_A 3-deoxy-manno-octuloson 100.0 4.8E-29 1.6E-33 221.0 20.3 221 48-270 1-231 (262)
7 2y6p_A 3-deoxy-manno-octuloson 100.0 5.1E-28 1.8E-32 210.0 22.7 212 48-270 1-212 (234)
8 1ezi_A CMP-N-acetylneuraminic 99.9 1.9E-25 6.5E-30 193.5 17.7 201 48-259 3-220 (228)
9 1qwj_A Cytidine monophospho-N- 99.9 4.8E-25 1.6E-29 191.6 18.2 175 47-235 1-184 (229)
10 3st8_A Bifunctional protein GL 99.9 1.8E-22 6.1E-27 194.5 18.4 208 49-270 12-236 (501)
11 3juk_A UDP-glucose pyrophospho 99.9 1.6E-22 5.5E-27 180.6 16.5 205 48-271 1-250 (281)
12 4ecm_A Glucose-1-phosphate thy 99.9 4.5E-22 1.5E-26 176.9 19.0 199 49-270 24-238 (269)
13 1fxo_A Glucose-1-phosphate thy 99.9 1.1E-21 3.9E-26 176.9 19.6 175 48-242 1-190 (293)
14 4fce_A Bifunctional protein GL 99.9 1.1E-21 3.7E-26 186.0 17.2 204 48-270 7-221 (459)
15 1hm9_A GLMU, UDP-N-acetylgluco 99.9 6.2E-21 2.1E-25 181.5 21.3 204 50-270 12-227 (468)
16 1lvw_A Glucose-1-phosphate thy 99.9 3.9E-21 1.3E-25 173.6 18.6 176 46-243 2-192 (295)
17 1mc3_A Glucose-1-phosphate thy 99.9 4.3E-21 1.5E-25 173.4 16.6 174 51-244 5-193 (296)
18 2pa4_A UTP-glucose-1-phosphate 99.9 4E-21 1.4E-25 175.4 15.4 206 50-271 13-262 (323)
19 2e3d_A UTP--glucose-1-phosphat 99.9 1.4E-20 4.9E-25 169.7 18.4 202 50-271 9-261 (302)
20 3q80_A 2-C-methyl-D-erythritol 99.9 1.4E-20 4.9E-25 164.3 17.1 193 49-270 7-210 (231)
21 2v0h_A Bifunctional protein GL 99.9 1.9E-20 6.7E-25 177.2 18.8 205 47-270 3-218 (456)
22 3pnn_A Conserved domain protei 99.8 3.7E-20 1.3E-24 167.6 18.8 214 46-271 2-271 (303)
23 3f1c_A Putative 2-C-methyl-D-e 99.8 1.9E-20 6.4E-25 164.5 15.7 196 47-270 1-213 (246)
24 2ux8_A Glucose-1-phosphate uri 99.8 5.6E-21 1.9E-25 172.1 11.6 206 48-271 13-259 (297)
25 2xwl_A 2-C-methyl-D-erythritol 99.8 6E-19 2.1E-23 151.4 19.2 142 48-202 1-147 (223)
26 2qh5_A PMI, ALGA, mannose-6-ph 99.8 4.7E-19 1.6E-23 160.6 19.1 178 48-235 3-198 (308)
27 2yc3_A 2-C-methyl-D-erythritol 99.8 1.6E-19 5.4E-24 155.8 14.6 118 48-166 3-126 (228)
28 2waw_A MOBA relate protein; un 99.8 1.4E-19 5E-24 152.3 13.6 114 48-162 4-120 (199)
29 1tzf_A Glucose-1-phosphate cyt 99.8 2.5E-19 8.7E-24 157.3 14.1 195 48-270 1-229 (259)
30 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 2.9E-19 1E-23 154.5 14.3 117 50-166 3-134 (236)
31 2wee_A MOBA-related protein; u 99.8 2.3E-19 7.9E-24 151.0 12.2 114 48-162 4-120 (197)
32 3brk_X Glucose-1-phosphate ade 99.8 6.9E-19 2.3E-23 165.7 16.5 216 42-269 4-252 (420)
33 1vgw_A 4-diphosphocytidyl-2C-m 99.8 3.1E-18 1.1E-22 147.8 18.3 117 48-166 5-132 (231)
34 1jyk_A LICC protein, CTP:phosp 99.8 1.4E-19 4.8E-24 159.7 9.8 157 48-235 24-190 (254)
35 2ggo_A 401AA long hypothetical 99.8 1.3E-18 4.5E-23 162.3 15.3 193 51-270 2-203 (401)
36 4evw_A Nucleoside-diphosphate- 99.8 2E-18 7E-23 152.5 14.7 193 52-270 2-225 (255)
37 3d5n_A Q97W15_sulso; NESG, SSR 99.8 5.6E-19 1.9E-23 150.0 10.3 109 48-163 1-112 (197)
38 2xme_A CTP-inositol-1-phosphat 99.8 1.3E-18 4.6E-23 150.8 11.3 174 39-240 8-188 (232)
39 1vpa_A 2-C-methyl-D-erythritol 99.8 4.1E-17 1.4E-21 141.2 20.5 113 50-166 14-135 (234)
40 1e5k_A Molybdopterin-guanine d 99.8 2.8E-18 9.6E-23 146.3 12.8 110 47-162 4-116 (201)
41 3ngw_A Molybdopterin-guanine d 99.8 9.1E-18 3.1E-22 144.2 14.6 107 51-165 2-110 (208)
42 1i52_A 4-diphosphocytidyl-2-C- 99.8 1.9E-18 6.3E-23 150.1 10.0 116 47-166 5-127 (236)
43 2cu2_A Putative mannose-1-phos 99.8 4.2E-18 1.4E-22 156.5 12.6 182 48-239 1-202 (337)
44 1yp2_A Glucose-1-phosphate ade 99.8 1.7E-17 5.7E-22 157.4 16.8 215 48-271 19-276 (451)
45 2x65_A Mannose-1-phosphate gua 99.7 1.8E-17 6.1E-22 152.2 15.0 175 51-235 3-200 (336)
46 2e8b_A Probable molybdopterin- 99.7 9.1E-18 3.1E-22 142.9 10.8 106 47-160 12-120 (201)
47 3rsb_A Adenosylcobinamide-phos 99.7 4.9E-18 1.7E-22 143.3 8.4 109 51-165 2-119 (196)
48 2dpw_A Hypothetical protein TT 99.7 2.7E-17 9.2E-22 143.0 11.3 155 48-239 1-160 (232)
49 2px7_A 2-C-methyl-D-erythritol 99.7 2.4E-17 8.4E-22 143.7 10.1 114 48-172 24-139 (236)
50 1w55_A ISPD/ISPF bifunctional 99.7 5.1E-17 1.7E-21 151.0 10.1 117 47-171 1-121 (371)
51 2i5k_A UTP--glucose-1-phosphat 99.4 4.4E-12 1.5E-16 121.5 15.4 183 48-239 91-321 (488)
52 2icy_A Probable UTP-glucose-1- 99.3 1.6E-11 5.6E-16 116.9 14.2 182 49-239 79-308 (469)
53 1jv1_A Glcnac1P uridyltransfer 99.3 5.2E-11 1.8E-15 114.5 15.1 185 48-239 101-342 (505)
54 3oc9_A UDP-N-acetylglucosamine 99.1 2.7E-09 9.3E-14 99.5 15.3 184 49-239 35-275 (405)
55 2i5e_A Hypothetical protein MM 98.9 3.5E-09 1.2E-13 90.2 8.4 102 50-161 4-111 (211)
56 2oeg_A UTP-glucose-1-phosphate 98.9 3.9E-09 1.3E-13 101.2 9.0 180 49-238 75-320 (505)
57 2yqc_A UDP-N-acetylglucosamine 98.9 4.2E-09 1.4E-13 100.9 8.8 182 49-237 103-348 (486)
58 3cgx_A Putative nucleotide-dip 97.8 6E-05 2E-09 65.6 8.8 113 48-165 3-130 (242)
59 3r3i_A UTP--glucose-1-phosphat 97.5 0.0011 3.7E-08 63.5 13.3 185 47-239 125-363 (528)
60 3gue_A UTP-glucose-1-phosphate 96.7 0.046 1.6E-06 51.9 15.5 60 49-108 76-146 (484)
61 3ogz_A UDP-sugar pyrophosphory 96.4 0.0032 1.1E-07 61.4 5.6 63 49-111 114-186 (630)
62 1xhb_A Polypeptide N-acetylgal 96.1 0.16 5.4E-06 47.4 15.3 107 46-169 27-145 (472)
63 1qg8_A Protein (spore coat pol 96.0 0.097 3.3E-06 44.1 12.4 94 73-169 12-119 (255)
64 3ckj_A Putative uncharacterize 95.8 0.13 4.3E-06 45.9 12.8 108 47-170 47-164 (329)
65 4hg6_A Cellulose synthase subu 95.5 0.12 4.1E-06 52.1 12.6 91 75-169 154-269 (802)
66 2ffu_A Ppgalnact-2, polypeptid 95.4 0.35 1.2E-05 45.6 14.9 105 47-169 65-177 (501)
67 3bcv_A Putative glycosyltransf 95.1 0.27 9.1E-06 40.8 11.9 99 48-165 5-111 (240)
68 2d7i_A Polypeptide N-acetylgal 94.9 0.62 2.1E-05 44.8 15.1 92 75-170 126-228 (570)
69 3f1y_A Mannosyl-3-phosphoglyce 94.8 0.2 7E-06 46.0 11.0 107 47-169 93-211 (387)
70 2z86_A Chondroitin synthase; G 93.4 0.47 1.6E-05 45.8 11.0 104 47-168 92-204 (625)
71 2z86_A Chondroitin synthase; G 93.3 0.74 2.5E-05 44.4 12.1 93 72-169 385-485 (625)
72 2bo4_A Mannosylglycerate synth 89.5 2.9 0.0001 38.5 11.2 47 124-172 77-127 (397)
73 4fix_A UDP-galactofuranosyl tr 88.7 0.65 2.2E-05 45.7 6.4 92 72-166 190-296 (657)
74 3l7i_A Teichoic acid biosynthe 75.1 0.59 2E-05 46.3 0.0 86 75-164 15-109 (729)
75 1fo8_A Alpha-1,3-mannosyl-glyc 60.0 33 0.0011 30.7 8.3 102 70-173 9-136 (343)
76 3auf_A Glycinamide ribonucleot 56.9 86 0.0029 26.2 11.6 79 76-157 35-120 (229)
77 3bej_E Nuclear receptor coacti 52.9 4.2 0.00014 21.9 0.6 22 7-28 1-22 (26)
78 2ywr_A Phosphoribosylglycinami 52.3 98 0.0033 25.5 10.3 87 52-156 4-98 (216)
79 4ds3_A Phosphoribosylglycinami 44.8 1.3E+02 0.0044 24.7 10.6 94 47-157 5-105 (209)
80 1omz_A Alpha-1,4-N-acetylhexos 43.9 35 0.0012 29.9 5.6 109 48-174 28-142 (293)
81 3av3_A Phosphoribosylglycinami 43.2 1.4E+02 0.0046 24.5 11.3 89 52-157 6-101 (212)
82 2nxv_A ATP synthase subunits r 38.1 39 0.0013 28.1 4.9 36 127-165 66-101 (249)
83 2c0n_A A197; thermophil protei 36.6 1.8E+02 0.0061 24.0 8.8 33 136-172 52-87 (203)
84 3p9x_A Phosphoribosylglycinami 36.2 1.8E+02 0.0062 23.9 12.0 89 52-158 5-101 (211)
85 3da8_A Probable 5'-phosphoribo 34.9 1.9E+02 0.0065 23.8 11.6 93 48-157 11-108 (215)
86 3n0v_A Formyltetrahydrofolate 34.5 2.2E+02 0.0076 24.5 11.0 90 51-157 92-185 (286)
87 3o1l_A Formyltetrahydrofolate 31.1 2.6E+02 0.009 24.3 9.3 89 52-157 108-200 (302)
88 3lou_A Formyltetrahydrofolate 28.3 2.9E+02 0.0099 23.8 11.0 91 51-158 97-191 (292)
89 1jkx_A GART;, phosphoribosylgl 27.8 2.5E+02 0.0085 22.9 11.4 89 52-157 3-98 (212)
90 4fn4_A Short chain dehydrogena 25.7 2.9E+02 0.01 23.1 8.4 8 196-203 136-143 (254)
91 3kcq_A Phosphoribosylglycinami 25.5 2.8E+02 0.0096 22.7 10.6 88 51-157 10-101 (215)
92 4g81_D Putative hexonate dehyd 25.3 3E+02 0.01 23.0 9.1 22 141-164 60-81 (255)
93 1meo_A Phosophoribosylglycinam 23.2 3E+02 0.01 22.3 12.0 89 52-157 3-98 (209)
No 1
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=100.00 E-value=2.7e-39 Score=287.38 Aligned_cols=223 Identities=35% Similarity=0.572 Sum_probs=188.5
Q ss_pred CceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCcHHHH
Q 023786 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERC 127 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g~~~i 127 (277)
|++.+||||||.||||++|+|++++|||||+|+++++.++ ++++|+|+|+++++.+++..+|+++++..+..++|++++
T Consensus 8 M~~~aIIlA~G~stRl~~K~L~~i~GkPli~~~l~~l~~~-~i~~VvVvt~~~~i~~~~~~~g~~v~~~~~~~~~Gt~~i 86 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRLPGKALVDIAGKPMIQHVYESAIKS-GAEEVVIATDDKRIRQVAEDFGAVVCMTSSDHQSGTERI 86 (256)
T ss_dssp -CCEEEEECCCC---CTTGGGCEETTEEHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCEEEECCTTCCSHHHHH
T ss_pred CCceEEEEcCCCCCCCCCCCeeeECCchHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHHHcCCeEEEeCCCCCCcHHHH
Confidence 7899999999999999999999999999999999999988 599999999999999988889999988766777899899
Q ss_pred HHHHHHcc-cCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeec-CCCCCCCCCceEEEECCCceEEeeecC
Q 023786 128 NEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRG 205 (277)
Q Consensus 128 ~~al~~~~-~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~-~~~~~~d~~~~~v~~~~~g~~~~f~~~ 205 (277)
..+++.+. .+.|.+++++||+||+++++++++++.+.++.++.+++.+.++ +.++..||+.+||+.|.+|++++|+|+
T Consensus 87 ~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~ 166 (256)
T 3tqd_A 87 AEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHA 166 (256)
T ss_dssp HHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESS
T ss_pred HHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecC
Confidence 89998874 2468999999999999999999999998764344456666665 345678999999999999999999999
Q ss_pred CcCCCCCCCC-----CCCCCceEEEEEEeecHHHHhhccCCCCCCCccccChHHHHHHHcCCeeEEEEeee
Q 023786 206 LIPYNKSGKV-----NPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVQQTYF 271 (277)
Q Consensus 206 ~~~~~~~~~~-----~~~~~~~~~~Giy~~~~~~l~~~~~~~~s~~~~~d~l~~l~~le~g~~v~~~~~~~ 271 (277)
++|++++... ....+++.|+|+|+|++++|+.+..++++.+|..|.+|+|+++++|++++++.++.
T Consensus 167 pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~~e~leqlr~le~G~~i~~~~~~~ 237 (256)
T 3tqd_A 167 PIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKMEALEQLRILWHGGRIHMVVAKS 237 (256)
T ss_dssp CSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCCEEEECSS
T ss_pred CCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccchhhhHHHHHHHCCCeEEEEEeCC
Confidence 9988754210 01236899999999999999999999999999999999999999999999998763
No 2
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=100.00 E-value=3.3e-38 Score=279.97 Aligned_cols=222 Identities=38% Similarity=0.579 Sum_probs=188.5
Q ss_pred eEEEEecCCCCccccccccccccccchHHHHH-HHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCcHHHHH
Q 023786 50 VVGIIPARFASSRFEGKPLVNILGKPMIQRTW-ERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCN 128 (277)
Q Consensus 50 i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i-~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g~~~i~ 128 (277)
+.|||||||+||||++|+|++++|+|||+|++ +++.++ ++++|+|+|+++++.+++..+|+++++..+..++|++++.
T Consensus 2 ~~aiIlA~G~stR~~~K~L~~i~GkPli~~~i~~~~~~~-~~~~vvVvt~~~~i~~~~~~~g~~v~~~~~~~~~Gt~~i~ 80 (253)
T 4fcu_A 2 KHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVE-GFDDLCVATDDERIAEICRAEGVDVVLTSADHPSGTDRLS 80 (253)
T ss_dssp EEEEEECCSCCTTSTTGGGSEETTEEHHHHHHHHHHTCT-TCCEEEEEESCHHHHHHHHTTTCCEEECCTTCCCHHHHHH
T ss_pred eEEEEEeCCCCCCCCCCceeeECCeEhHHHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHcCCeEEEeCCCCCChHHHHH
Confidence 46999999999999999999999999999999 999887 5999999999999999888889998876666678888999
Q ss_pred HHHHHccc-CCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecC-CCCCCCCCceEEEECCCceEEeeecCC
Q 023786 129 EALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGL 206 (277)
Q Consensus 129 ~al~~~~~-~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~-~~~~~d~~~~~v~~~~~g~~~~f~~~~ 206 (277)
+|++.+.. +.|++++++||+||+++++|+++++.+.+++++.+++..++++ .++..||+.++++.+.+|+++||+|++
T Consensus 81 ~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~kvv~d~~g~~l~fsr~~ 160 (253)
T 4fcu_A 81 EVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRAT 160 (253)
T ss_dssp HHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECTTSBEEEEESSC
T ss_pred HHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCccEEEECCCCeEEEecCCC
Confidence 99988752 4689999999999999999999999987653333444444542 245689999999999999999999999
Q ss_pred cCCCCCCCCC-C---CCCceEEEEEEeecHHHHhhccCCCCCCCccccChHHHHHHHcCCeeEEEEeeeE
Q 023786 207 IPYNKSGKVN-P---QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVQQTYFT 272 (277)
Q Consensus 207 ~~~~~~~~~~-~---~~~~~~~~Giy~~~~~~l~~~~~~~~s~~~~~d~l~~l~~le~g~~v~~~~~~~~ 272 (277)
+|+.++.... + ...++.|+|+|+|++++|+.+..++++.+|.+|.+++|+++++|++++++.++..
T Consensus 161 ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~~le~~e~le~lr~l~~G~~I~~~~~~~~ 230 (253)
T 4fcu_A 161 IPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEAN 230 (253)
T ss_dssp CSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCTTHHHHHTTCCEEEEECSSC
T ss_pred CCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHhCCCCcccchhHHHHHHHHHCCCceEEEEeCCC
Confidence 9886642110 0 2357899999999999999999889999999999999999999999999987654
No 3
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=100.00 E-value=2.8e-38 Score=282.00 Aligned_cols=225 Identities=40% Similarity=0.650 Sum_probs=187.7
Q ss_pred CCCCCCceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcCCC
Q 023786 43 SKNFRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRN 122 (277)
Q Consensus 43 ~~~~~m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~ 122 (277)
+++..|++.|||||||.|||||+|+|++++|+|||+|+++++.+++ +++|+|+|+++++.+++..+|+++++..+..++
T Consensus 12 ~~~~~M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~~~-i~~IvV~t~~~~i~~~~~~~g~~v~~~~~~~~~ 90 (264)
T 3k8d_A 12 PRGSHMSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESG-AERIIVATDHEDVARAVEAAGGEVCMTRADHQS 90 (264)
T ss_dssp ------CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTTCEEEECCTTCCS
T ss_pred cCCCCCceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHcCCEEEEecCCCCC
Confidence 3466789999999999999999999999999999999999999884 999999999999988888899998887667778
Q ss_pred cHHHHHHHHHHcc-cCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecC-CCCCCCCCceEEEECCCceEE
Q 023786 123 GTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAI 200 (277)
Q Consensus 123 g~~~i~~al~~~~-~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~-~~~~~d~~~~~v~~~~~g~~~ 200 (277)
|++++..+++.+. .+.|.+++++||+||+++++++++++.+.+. ++.+++.+.++. +++..||+.+|++.+.+|+++
T Consensus 91 Gt~~i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~-~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g~~l 169 (264)
T 3k8d_A 91 GTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQR-QVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYAL 169 (264)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTS-SCSEEEEEEECCSHHHHTCTTSCEEEECTTSBEE
T ss_pred CHHHHHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc-CCCEEEEEEEcCCHHHccCCCceEEEECCCCeEE
Confidence 9988888887774 2468999999999999999999999998753 454566566653 346679999999999999999
Q ss_pred eeecCCcCCCCCC----CCCCCCCceEEEEEEeecHHHHhhccCCCCCCCccccChHHHHHHHcCCeeEEEEe
Q 023786 201 YFSRGLIPYNKSG----KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVQQT 269 (277)
Q Consensus 201 ~f~~~~~~~~~~~----~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~s~~~~~d~l~~l~~le~g~~v~~~~~ 269 (277)
+|+|+++|++++. ......+++.|+|+|+|++++|+.+..++++.+|..|.+++|+++++|++++++..
T Consensus 170 ~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~~lE~~e~leqlr~le~G~~I~~~~~ 242 (264)
T 3k8d_A 170 YFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVA 242 (264)
T ss_dssp EEESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCEEEEEC
T ss_pred EEecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCCChhhhHHHHHHHHHHHCCCceEEEEe
Confidence 9999998865421 00012357999999999999999998888999999999999999999999999754
No 4
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=100.00 E-value=1.4e-37 Score=275.15 Aligned_cols=220 Identities=42% Similarity=0.678 Sum_probs=187.0
Q ss_pred CceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCcHHHH
Q 023786 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERC 127 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g~~~i 127 (277)
|++.|||||||+|||||+|+|++++|+|||+|+++++.++ ++++|+|+++++++.+++.++|+++++..++.+.|++++
T Consensus 1 M~~~aiIlA~G~stRlp~K~L~~i~GkPli~~~l~~l~~~-~~~~ivVv~~~~~i~~~~~~~g~~v~~~~~~~~~Gt~~~ 79 (252)
T 3oam_A 1 MSFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQA-GADRVIIATDDERVEQAVQAFGGVVCMTSPNHQSGTERL 79 (252)
T ss_dssp CCEEEEEECCCCCSSSTTGGGCEETTEEHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCEEEECCTTCCSHHHHH
T ss_pred CceEEEEecCcCCCCCCCcceeeECCEEHHHHHHHHHHhC-CCCeEEEECCHHHHHHHHHHcCCEEEEcCCCCCCcHHHH
Confidence 7899999999999999999999999999999999999988 489999999999999999889999988777778899888
Q ss_pred HHHHHHcc-cCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecC-CCCCCCCCceEEEECCCceEEeeecC
Q 023786 128 NEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRG 205 (277)
Q Consensus 128 ~~al~~~~-~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~-~~~~~d~~~~~v~~~~~g~~~~f~~~ 205 (277)
..+++.+. .+.|.+++++||+||+++++++++++.+.++ ++.+++.+.++. +++..||+.++++.+.+|++++|+|+
T Consensus 80 ~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~-~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~g~v~~fsr~ 158 (252)
T 3oam_A 80 AEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAAC-SAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRA 158 (252)
T ss_dssp HHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHS-SCSEEEEEEEECCHHHHTCTTSCEEEECTTSBEEEEESS
T ss_pred HHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhc-CCCEEEEeeecCCHHHhhCCCceEEEECCCCeEEEEeCC
Confidence 88888773 2468999999999999999999999998764 344555555553 34567888889999999999999999
Q ss_pred CcCCCCCCC---CC-CCCCceEEEEEEeecHHHHhhccCCCCCCCccccChHHHHHHHcCCeeEEEEe
Q 023786 206 LIPYNKSGK---VN-PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVQQT 269 (277)
Q Consensus 206 ~~~~~~~~~---~~-~~~~~~~~~Giy~~~~~~l~~~~~~~~s~~~~~d~l~~l~~le~g~~v~~~~~ 269 (277)
++|+.++.. +. ...+++.|+|+|+|++++|+.+...+++.++..|.+++++.+++|++++++..
T Consensus 159 ~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le~lr~l~~G~~i~~~~~ 226 (252)
T 3oam_A 159 TIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVA 226 (252)
T ss_dssp CSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCEEEEEC
T ss_pred CCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccchhHHHHHHHCCCeEEEEEe
Confidence 988754310 00 12368999999999999999999888899999999999999999999998754
No 5
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.97 E-value=2e-29 Score=220.50 Aligned_cols=217 Identities=36% Similarity=0.652 Sum_probs=167.7
Q ss_pred CceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCcHHHH
Q 023786 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERC 127 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g~~~i 127 (277)
|++.|||||||.|||||+|+|++++|+|||+|+++++.+++.+++|+|+++++++.+++.+++++++.+++...+|++++
T Consensus 1 m~~~aiIlA~G~~~R~~~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (245)
T 1h7e_A 1 SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMTRNDHESGTDRL 80 (245)
T ss_dssp CCEEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESCHHHHHHHHHTTCEEEECCSCCSSHHHHH
T ss_pred CCeEEEEEcCCcCCCCCCCcccccCCchHHHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHcCCeEEeCCCccCCcHHHH
Confidence 67899999999999999999999999999999999999885459999999988888888888999888765666788888
Q ss_pred HHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEEEECCCceEEeeecCCc
Q 023786 128 NEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLI 207 (277)
Q Consensus 128 ~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v~~~~~g~~~~f~~~~~ 207 (277)
..+++.+ +.|.+++++||+||+++++++++++.+.++.++.+++.+.+.++.+..+|+.++++.+.+|+++.|++++.
T Consensus 81 ~~~~~~~--~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 158 (245)
T 1h7e_A 81 VEVMHKV--EADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPI 158 (245)
T ss_dssp HHHHHHS--CCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHTCTTSCEEEECTTCBEEEEESSCS
T ss_pred HHHHHhC--CCCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCCHHHhcCCCCcEEEECCCCcEEEeecCCC
Confidence 8888777 46899999999999999999999998865312222222333221223467777777788999999987654
Q ss_pred CCCCCCCCCC-CCCceEEEEEEeecHHHHhhccCCCCCCCccccChHHHHHHHcCCeeEEEEee
Q 023786 208 PYNKSGKVNP-QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 208 ~~~~~~~~~~-~~~~~~~~Giy~~~~~~l~~~~~~~~s~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
+..++ + ..+.+.+.|+|+|+++.|..+......+++..|.++.+++++.|.+++.+..+
T Consensus 159 ~~~r~----~~~~~~~~~~g~y~~~~~~l~~~~~~~~~~~~~td~~~~~~~~~~g~~v~~~~~~ 218 (245)
T 1h7e_A 159 PYPRN----AEKARYLKHVGIYAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVA 218 (245)
T ss_dssp SCCTT----GGGCCEEEEEEEEEEEHHHHHHGGGSCCCHHHHHHTCTTHHHHHTTCCEEEEECC
T ss_pred CCCcc----cccCceeEEEEEEEcCHHHHHHHHhCCCCccccchhhHHHHHHHCCCeEEEEEeC
Confidence 42211 0 12467899999999998876655455556666777777667889999888765
No 6
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.97 E-value=4.8e-29 Score=221.00 Aligned_cols=221 Identities=43% Similarity=0.716 Sum_probs=165.1
Q ss_pred CceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCcHHHH
Q 023786 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERC 127 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g~~~i 127 (277)
|++.|||||||.||||++|+|++++|+|||+|+++++.++ ++++|+|+++++++.+++..+++.++.+++...+|++++
T Consensus 1 m~~~aiIlA~G~g~R~~~K~l~~~~gkpli~~~l~~l~~~-~~~~ivvv~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~ 79 (262)
T 1vic_A 1 MSFTVIIPARFASSRLPGKPLADIKGKPMIQHVFEKALQS-GASRVIIATDNENVADVAKSFGAEVCMTSVNHNSGTERL 79 (262)
T ss_dssp -CCEEEEECCCCCSSSTTGGGCEETTEEHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCEEEECCCSSCCHHHHH
T ss_pred CCcEEEEEcCCCCCCCCCCccccCCCeEHHHHHHHHHHhC-CCceEEEECCcHHHHHHHHhcCCEEEECCccccCChHHH
Confidence 5678999999999999999999999999999999999988 469999999988888888888998887765666788777
Q ss_pred HHHHHHccc-CCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCC-CCCCCCCceEEEECCCceEEeeecC
Q 023786 128 NEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRG 205 (277)
Q Consensus 128 ~~al~~~~~-~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~-~~~~d~~~~~v~~~~~g~~~~f~~~ 205 (277)
..+++.+.. +.|.+++++||+||+++++++++++.+.+. ++.+++.+.+... ++..+|+.++++.+.+|++++|+++
T Consensus 80 ~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~f~~~ 158 (262)
T 1vic_A 80 AEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKF-NVNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRS 158 (262)
T ss_dssp HHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHH-TCSEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESS
T ss_pred HHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhc-CCCEEEEEEecCCHHHhcCCCceEEEECCCCCEeeeecC
Confidence 666666632 358899999999999999999999988653 2223333344321 1233566677777888999999887
Q ss_pred CcCCCCCC--------CCCCCCCceEEEEEEeecHHHHhhccCCCCCCCccccChHHHHHHHcCCeeEEEEee
Q 023786 206 LIPYNKSG--------KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 206 ~~~~~~~~--------~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~s~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
++|..++. .......+..++|+|+|+++.+..+...+++.+++.+.++++++++.|.++..+..+
T Consensus 159 ~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~e~~~~~~~l~~g~~v~~~~~~ 231 (262)
T 1vic_A 159 VIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAK 231 (262)
T ss_dssp CSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHHHTTCCEEEEECS
T ss_pred CCCcCCccccccccccccccccceEEEEEEEEeeHHHHHHHHhCCCCchhhhhhHHHHHHHHCCCeEEEEEeC
Confidence 65532210 001112468999999999999987655555555555555555677889999888865
No 7
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.96 E-value=5.1e-28 Score=209.97 Aligned_cols=212 Identities=36% Similarity=0.575 Sum_probs=161.0
Q ss_pred CceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCcHHHH
Q 023786 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERC 127 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g~~~i 127 (277)
|++.|||||||.||||++|+|++++|+|||+|+++++.++ +++|+|+++++++.+++.++ ++++..++...+|++++
T Consensus 1 m~~~aiIlA~G~g~R~~~K~l~~i~g~pli~~~l~~~~~~--~~~i~v~~~~~~i~~~~~~~-~~~~~~~~~~~~g~~~~ 77 (234)
T 2y6p_A 1 MRRAVIIPARLGSTRLKEKPLKNLLGKPLIRWVVEGLVKT--GERVILATDSERVKEVVEDL-CEVFLTPSDLPSGSDRV 77 (234)
T ss_dssp -CEEEEEECCSCCTTTTTGGGCEETTEEHHHHHHHHHHTT--TSCEEEEESCHHHHHHHTTT-SEEEECCTTCCSHHHHH
T ss_pred CceEEEEEcCCCCCCCCCCcceeECCEEHHHHHHHHHHHh--CCEEEEECChHHHHHHHHhc-eEEEECCcccccchHHH
Confidence 5788999999999999999999999999999999999886 89999999988888887766 77777666666788777
Q ss_pred HHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEEEECCCceEEeeecCCc
Q 023786 128 NEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLI 207 (277)
Q Consensus 128 ~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v~~~~~g~~~~f~~~~~ 207 (277)
..+++.+ +.|.+++++||+||+++++++++++.+.+.. ..+++... ...+..+|..++++.+++|++..|.+++.
T Consensus 78 ~~~~~~~--~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~g~v~~~~e~~~ 152 (234)
T 2y6p_A 78 LYVVRDL--DVDLIINYQGDEPFVYEEDIKLIFRELEKGE-RVVTLARK--DKEAYERPEDVKVVLDREGYALYFSRSPI 152 (234)
T ss_dssp HHHHTTC--CCSEEEECCTTCCCCCHHHHHHHHHHHHHTC-SEEEEEEE--CSGGGGCTTSCEEEECTTSBEEEEESSCC
T ss_pred HHHHHhC--CCCEEEEecCCcCcCCHHHHHHHHHHHHhCC-CeEEEecC--CHHHhcCCCceEEEEcCCCCEeeeecCCC
Confidence 7777666 3589999999999999999999999887643 34443322 11234567777776788899999988764
Q ss_pred CCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCCCCCCccccChHHHHHHHcCCeeEEEEee
Q 023786 208 PYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~s~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
++.++. ++.+.+.+.|+|+|+++.|..+.......++..|.++.++.++.|.++..+..+
T Consensus 153 ~~~~~~---~~~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~g~~v~~~~~~ 212 (234)
T 2y6p_A 153 PYFRKN---DTFYPLKHVGIYGFRKETLMEFGAMPPSKLEQIEGLEQLRLLENGIKIKVLITE 212 (234)
T ss_dssp SCCSSC---CSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTHHHHHHTTCCCEEEECC
T ss_pred Cccccc---ccceeeEEEEEEEcCHHHHHHHHhCCCCccchhhHHHHHHHHHCCCeEEEEEeC
Confidence 422210 012467899999999999887654444444444555556667788888888765
No 8
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.93 E-value=1.9e-25 Score=193.50 Aligned_cols=201 Identities=18% Similarity=0.160 Sum_probs=141.2
Q ss_pred CceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcC----CCc
Q 023786 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESC----RNG 123 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~----~~g 123 (277)
|++.|||||||.||||++|+|++++|+|||+|+++++.+++.+++|+|+++++++.+++++++++++.+++.. .+.
T Consensus 3 m~~~aiIlA~G~g~R~~~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~ 82 (228)
T 1ezi_A 3 KQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASS 82 (228)
T ss_dssp CEEEEEEECCSSCSSSTTTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHTTCEEEECCC------CHH
T ss_pred CceEEEEecCCCCCCCCCcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCCHHHHHHHHHcCCEEEeCchHHcCCCCCh
Confidence 6788999999999999999999999999999999999988558999999998888888888898886654321 122
Q ss_pred HHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcC-CCcEEEEEeeecCCCCCCCCCceEEEECCCceEEee
Q 023786 124 TERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA-PDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYF 202 (277)
Q Consensus 124 ~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~-~~~~v~~~~~~~~~~~~~d~~~~~v~~~~~g~~~~f 202 (277)
..++.+|++.+..+.|.+++++||+||+++++++++++.+.++ .++++. +.+.. .+|....++ +.+|++..|
T Consensus 83 ~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~--~~~~~----~~p~~~~~~-~~~g~~~~~ 155 (228)
T 1ezi_A 83 ISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVS--ACPME----HHPLKTLLQ-INNGEYAPM 155 (228)
T ss_dssp HHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEE--EEECS----SCTTSCEEE-CC--CEEES
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEE--EEecC----CCcceeeEE-cCCCcEeec
Confidence 3568889888743458899999999999999999999877543 244333 33331 124444443 778888887
Q ss_pred ec-C-CcCCCCCCCCCCCCCceEEEEEEeecHHHHhhc---cC-------CCCCCCccccChHHHHHHH
Q 023786 203 SR-G-LIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIY---PG-------LHPTPLQLEEDLEQLKVLE 259 (277)
Q Consensus 203 ~~-~-~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~---~~-------~~~s~~~~~d~l~~l~~le 259 (277)
.+ + ..+...+ ....+..+.|+|+|+.+.+... .. .......++|+.+++...+
T Consensus 156 ~~~~~~~~~~~~----~~~~~~~~~giy~~~~~~l~~~~~~~g~~v~~~~~~~~~~~dIdtpeDl~~a~ 220 (228)
T 1ezi_A 156 RHLSDLEQPRQQ----LPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQAE 220 (228)
T ss_dssp SCHHHHTCCGGG----SCCEEEEEEEEEEEEHHHHHHHTSSCCSSCEEEECCTGGGCCCCSHHHHHHHH
T ss_pred cccccccCCccc----CchhheeeeEEEEEeHHHHhhCCcccCCceEEEEeCcccccCCCCHHHHHHHH
Confidence 54 1 1111000 0112467899999998876543 11 1222456788888886554
No 9
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.93 E-value=4.8e-25 Score=191.64 Aligned_cols=175 Identities=20% Similarity=0.213 Sum_probs=129.9
Q ss_pred CCceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCC----cCCC
Q 023786 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSE----SCRN 122 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~----~~~~ 122 (277)
.|++.|||||||+||||++|+|++++|+|||+|+++++.+++.+++|+|+++++++.+++.++|++++.+++ ...+
T Consensus 1 ~~~~~aiIlA~G~s~R~~~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~ 80 (229)
T 1qwj_A 1 PPHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDHDEIENVAKQFGAQVHRRSSETSKDSST 80 (229)
T ss_dssp CCCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTTCEEEECCGGGSSTTCC
T ss_pred CCcEEEEEEcCCCCCCCCCcccceECCEEHHHHHHHHHHhCCCcCEEEEECChHHHHHHHHHcCCEEEeChhhhcCCCCc
Confidence 367899999999999999999999999999999999999885579999999988888888888998877653 3446
Q ss_pred cHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcC-CCcEEEEEeeecCCCCCCCCCceEEEECCCceEEe
Q 023786 123 GTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA-PDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 201 (277)
Q Consensus 123 g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~-~~~~v~~~~~~~~~~~~~d~~~~~v~~~~~g~~~~ 201 (277)
++.++.+|++.+. +.|.+++++||+||+++++++++++.+.++ .++++++. .. .+|..+++ .+ |. ..
T Consensus 81 ~~~~v~~al~~~~-~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~--~~-----~~p~~~~v-~~--~~-~~ 148 (229)
T 1qwj_A 81 SLDAIVEFLNYHN-EVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVV--RR-----HQFRWSEI-QK--GV-RE 148 (229)
T ss_dssp HHHHHHHHHTTCT-TCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEE--EE-----CCCEECCC-CS--ST-TC
T ss_pred HHHHHHHHHHhcC-CCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEe--ec-----cChhHhhc-cc--cc-cc
Confidence 6678889988773 468999999999999999999999988654 24344432 21 34444433 22 21 12
Q ss_pred eecCCcCCC--CCCCCCCC--CCceEEEEEEeecHHHH
Q 023786 202 FSRGLIPYN--KSGKVNPQ--FPYLLHLGIQSYDSNFL 235 (277)
Q Consensus 202 f~~~~~~~~--~~~~~~~~--~~~~~~~Giy~~~~~~l 235 (277)
|.+..+++. ++ ++++ ..+..|+|+|+|+++.|
T Consensus 149 ~~~~~~~~~~~~~--~~~~~~~~~~~n~giY~~~~~~l 184 (229)
T 1qwj_A 149 VTEPLNLNPAKRP--RRQDWDGELYENGSFYFAKRHLI 184 (229)
T ss_dssp CCCBSSSBTTBCC--CTTTSCCEEEEEEEEEEEEHHHH
T ss_pred ccccccccccccc--CCCCCCceEEEeeEEEEEEHHHh
Confidence 443323322 11 1222 23578999999999887
No 10
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.89 E-value=1.8e-22 Score=194.51 Aligned_cols=208 Identities=16% Similarity=0.182 Sum_probs=153.8
Q ss_pred ceEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHH----HcCCeEEecCCc
Q 023786 49 RVVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQ----QFGADVIMTSES 119 (277)
Q Consensus 49 ~i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~----~~g~~vi~~~~~ 119 (277)
++.+||||||+||||. ||+|+|++|+|||+|+++.+.++ ++++|+|++++ +.+.+++. .++.++.+..++
T Consensus 12 ~~~vvILAaG~GtRm~~~~pK~l~pv~gkp~i~~~l~~~~~~-g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~q~ 90 (501)
T 3st8_A 12 DTAVLVLAAGPGTRMRSDTPKVLHTLAGRSMLSHVLHAIAKL-APQRLIVVLGHDHQRIAPLVGELADTLGRTIDVALQD 90 (501)
T ss_dssp CEEEEEEECSCCGGGCCSSCGGGCEETTEEHHHHHHHHHHHH-CCSEEEEEECTTHHHHHHHHHHHHHHHTSCCEEEECS
T ss_pred CceEEEECCcCcccCCCCCCHHHeEECChhHHHHHHHHHHhC-CCCEEEEEeCCCHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 4678999999999996 79999999999999999999998 69999999974 56666653 345555444456
Q ss_pred CCCcHH-HHHHHHHHcccC-CCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEE-EECCC
Q 023786 120 CRNGTE-RCNEALQKLEKK-YDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKC-VVDNH 196 (277)
Q Consensus 120 ~~~g~~-~i~~al~~~~~~-~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v-~~~~~ 196 (277)
.+.||+ +++.|++.+..+ .+.++++.+|.|+++.+++..+++.+++. ++.+++...+. .||..|++ +.+++
T Consensus 91 ~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~-~~~~ti~~~~~-----~dp~~yG~i~~~~~ 164 (501)
T 3st8_A 91 RPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAV-SAAVTVLTTTL-----DDPFGYGRILRTQD 164 (501)
T ss_dssp SCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT-TCSEEEEEEEC-----SCCTTSCEEEECTT
T ss_pred CCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhc-cccceEeeecc-----CCchhccccccccc
Confidence 667875 578888887532 46899999999999999999999988764 44455555553 67877654 57899
Q ss_pred ceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccC-----CCCCCCccccChHHHHHHHcCCeeEEEEee
Q 023786 197 GYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPG-----LHPTPLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 197 g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~-----~~~s~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
|++..|.+++...+ .+..+.++|+|+|+|+.+.|+.+.. ....+++..|..+.+ ...|..+..+..+
T Consensus 165 g~v~~ivEk~~~~~-----~~~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~~--~~~g~~v~~~~~~ 236 (501)
T 3st8_A 165 HEVMAIVEQTDATP-----SQREIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAIL--RSDGQTVHASHVD 236 (501)
T ss_dssp CCEEEEECGGGCCH-----HHHHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHHH--HHTTCCEEEEECS
T ss_pred eeEEeeccccCCCh-----hhccceeeeceeeeecchhHHHhhhhhcccccccccchhhHHHHH--HhcCceEEEEecc
Confidence 99998887653221 1224578999999999988876642 223345555544433 4777777766544
No 11
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.89 E-value=1.6e-22 Score=180.60 Aligned_cols=205 Identities=13% Similarity=0.107 Sum_probs=143.7
Q ss_pred CceEEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecC--chHHHHHHHH-----------
Q 023786 48 SRVVGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATD--DEKIAECCQQ----------- 108 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~--~~~i~~~~~~----------- 108 (277)
|.+.|||||||.||||+ ||+|++++|+|||+|+++++.++ ++++|+|+++ .+.+.+++..
T Consensus 1 M~~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~-gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 79 (281)
T 3juk_A 1 MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEA-GCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGT 79 (281)
T ss_dssp CCCEEEEECCSCCGGGTTGGGTSCGGGCBSSSSBHHHHHHHHHHHH-TCCEEEEEECTTHHHHHHHTSCCC--------C
T ss_pred CceEEEEECCcCCcccCccccCCCcccceECCEEHHHHHHHHHHhC-CCCEEEEEecCCHHHHHHHHhcchhhhhhhhcc
Confidence 45679999999999996 49999999999999999999998 5999999996 3566666532
Q ss_pred -------------cCCeEEecCCcCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHH----HHHHHHHHHHcCCCcE
Q 023786 109 -------------FGADVIMTSESCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPE----IIDGVVKALQAAPDAV 170 (277)
Q Consensus 109 -------------~g~~vi~~~~~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~----~i~~li~~~~~~~~~~ 170 (277)
++.++.+..+..+.|+ .++..|++.+. .+.+++++||+ +++.+ +++++++.+.+...++
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~--~~~~lv~~~D~-~~~~~~~~~~l~~l~~~~~~~~~~~ 156 (281)
T 3juk_A 80 NKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIG--NEPFAVILADD-LCISHDHPSVLKQMTSLYQKYQCSI 156 (281)
T ss_dssp CHHHHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHC--SSCEEEECTTE-EEECTTSCCHHHHHHHHHHHHCSCE
T ss_pred cchhhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcC--CCCEEEEeCCe-eccCccchHHHHHHHHHHHHcCCCE
Confidence 2456544434445565 56888888884 46799999999 77777 7999999886542344
Q ss_pred EEEEeeecCCCCCCCCCceEEE-ECC--Cc--eEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCCC--
Q 023786 171 FSTAVTSLKPEDAFDPNRVKCV-VDN--HG--YAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHP-- 243 (277)
Q Consensus 171 v~~~~~~~~~~~~~d~~~~~v~-~~~--~g--~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~-- 243 (277)
+++ .... ..++..++++ .++ +| ++..|.+++.+. +..+.+.++|+|+|++++|+.+...++
T Consensus 157 v~~--~~~~---~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~-------~~~~~~~~~GiYi~~~~~l~~l~~~~~~~ 224 (281)
T 3juk_A 157 VAI--EEVA---LEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQE-------DAPSNLAVIGRYILTPDIFEILSETKPGK 224 (281)
T ss_dssp EEE--EECC---TTTGGGSEEEEEEEEETTEEEEEEEEESCCTT-------TCSCSEEEEEEEEECTTHHHHHHTCCCCG
T ss_pred EEE--EEec---hhhcccCCEEEeccCCCCceEEeEEEECcCCC-------CCCcceeEEEEEEECHHHHHHHHhcCCCC
Confidence 443 2221 1345555544 343 67 888898876321 123578999999999999987765543
Q ss_pred -CCCccccChHHHHHHHcCCeeEEEEeee
Q 023786 244 -TPLQLEEDLEQLKVLENGYKMKVQQTYF 271 (277)
Q Consensus 244 -s~~~~~d~l~~l~~le~g~~v~~~~~~~ 271 (277)
.+++..|.++.+ ++.| ++.++..++
T Consensus 225 ~~e~~l~d~i~~l--~~~~-~v~~~~~~g 250 (281)
T 3juk_A 225 NNEIQITDALRTQ--AKRK-RIIAYQFKG 250 (281)
T ss_dssp GGSCCHHHHHHHH--HHHS-CCEEEECCS
T ss_pred CCceeHHHHHHHH--HhcC-CEEEEEeCC
Confidence 234434444433 3555 787777654
No 12
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.89 E-value=4.5e-22 Score=176.94 Aligned_cols=199 Identities=19% Similarity=0.200 Sum_probs=140.7
Q ss_pred ceEEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecCc---hHHHHHHH---HcCCeEEec
Q 023786 49 RVVGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD---EKIAECCQ---QFGADVIMT 116 (277)
Q Consensus 49 ~i~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~---~~i~~~~~---~~g~~vi~~ 116 (277)
++.|||||||.||||+ ||+|++++|+|||+|+++++.++ ++++|+|+++. +++.+++. .+++++.+.
T Consensus 24 ~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~pli~~~l~~l~~~-g~~~iivv~~~~~~~~~~~~~~~~~~~~~~i~~~ 102 (269)
T 4ecm_A 24 AMKGIILAGGTGSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQC-DITDIMIITGKEHMGDVVSFLGSGQEFGVSFTYR 102 (269)
T ss_dssp CEEEEEECCSCCGGGTTTTSSSCGGGSEETTEEHHHHHHHHHHHT-TCCEEEEEECTTTHHHHHHHHTTSGGGTCEEEEE
T ss_pred CcEEEEECCCCccccccccCCCCceecEECCEEHHHHHHHHHHHC-CCCEEEEECChhhHHHHHHHHhhccccCceEEEe
Confidence 3679999999999996 49999999999999999999988 59999999983 45655554 356676554
Q ss_pred CCcCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEEEECC
Q 023786 117 SESCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDN 195 (277)
Q Consensus 117 ~~~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v~~~~ 195 (277)
.+....|+ .++..|++.++ .+.+++++||+|+. .+++++++.+.+. ++.+++.+.+. .++..++++...
T Consensus 103 ~~~~~~G~~~al~~a~~~~~--~~~~lv~~~D~~~~--~~l~~l~~~~~~~-~~~~~~~~~~~-----~~~~~~g~v~~d 172 (269)
T 4ecm_A 103 VQDKAGGIAQALGLCEDFVG--NDRMVVILGDNIFS--DDIRPYVEEFTNQ-KEGAKVLLQSV-----DDPERFGVANIQ 172 (269)
T ss_dssp ECSSCCCHHHHHHTTHHHHT--TSEEEEEETTEEES--SCSHHHHHHHHTS-SSSEEEEEEEC-----SCGGGSEEEEEE
T ss_pred eCCccCcHHHHHHHHHHhcC--CCcEEEEeCCccCc--cCHHHHHHHHHhc-CCCeEEEEEEC-----CCCCCceEEEEc
Confidence 34445565 56888888774 57899999999884 6899999988653 23334434443 355555555444
Q ss_pred CceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCCCC---CCccccChHHHHHHHcCCeeEEEEee
Q 023786 196 HGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPT---PLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 196 ~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~s---~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
+|++..|.+++. ...+.+.++|+|+|++++|+.+....++ +++..|.++. +++.| ++..+..+
T Consensus 173 ~g~v~~~~ekp~---------~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~ge~~l~d~l~~--l~~~g-~v~~~~~~ 238 (269)
T 4ecm_A 173 NRKIIEIEEKPK---------EPKSSYAVTGIYLYDSKVFSYIKELKPSARGELEITDINNW--YLKRG-VLTYNEMS 238 (269)
T ss_dssp TTEEEEEEESCS---------SCSCSEEEEEEEEECTTHHHHHTSCCBCTTSCBCHHHHHHH--HHHTT-CEEEEECC
T ss_pred CCEEEEEEECCC---------CCCCcEEEEEEEEECHHHHHhhhhcCCCCCCeeeHHHHHHH--HHHcC-CEEEEEeC
Confidence 689999887651 1135799999999999999877654433 3433333332 33555 67666544
No 13
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.88 E-value=1.1e-21 Score=176.91 Aligned_cols=175 Identities=19% Similarity=0.251 Sum_probs=128.6
Q ss_pred CceEEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEec-C--chHHHHHHHH---cCCeEEe
Q 023786 48 SRVVGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVAT-D--DEKIAECCQQ---FGADVIM 115 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt-~--~~~i~~~~~~---~g~~vi~ 115 (277)
|++.+||||||.||||+ +|+|++++|+|||+|+++.+..+ ++++|+|++ + .+.+.+++.. +|+++.+
T Consensus 1 M~~~aIILAgG~gtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~-gi~~I~vv~~~~~~~~i~~~l~~g~~~g~~i~~ 79 (293)
T 1fxo_A 1 MKRKGIILAGGSGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLA-GIREILIISTPQDTPRFQQLLGDGSNWGLDLQY 79 (293)
T ss_dssp -CEEEEEECCCCCTTTTTHHHHSCGGGSEETTEETTHHHHHHHHHT-TCCEEEEEECTTTHHHHHHHHTTSGGGTCEEEE
T ss_pred CCceEEEECCCCCCcCccccCCCCceeCeECCEeHHHHHHHHHHHC-CCCEEEEEeccccHHHHHHHHhcccccCceEEE
Confidence 56789999999999997 89999999999999999999988 599998766 3 2556666654 6777644
Q ss_pred cCCcCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcC-CCcEEEEEeeecCCCCCCCCCceEEE-
Q 023786 116 TSESCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA-PDAVFSTAVTSLKPEDAFDPNRVKCV- 192 (277)
Q Consensus 116 ~~~~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~-~~~~v~~~~~~~~~~~~~d~~~~~v~- 192 (277)
..++.+.|+ .++..|++.+. .+.++++.||+||.+ .++.++++.+.+. .++.+ ...+. .||..++++
T Consensus 80 ~~~~~~~G~~~al~~a~~~i~--~~~~~lv~gD~~~~~-~~l~~~l~~~~~~~~~~~v--~~~~v-----~dp~~~g~v~ 149 (293)
T 1fxo_A 80 AVQPSPDGLAQAFLIGESFIG--NDLSALVLGDNLYYG-HDFHELLGSASQRQTGASV--FAYHV-----LDPERYGVVE 149 (293)
T ss_dssp EECSSCCCGGGHHHHTHHHHT--TSEEEEEETTEEEEC-TTHHHHHHHHHTCCSSEEE--EEEEC-----SCGGGSEEEE
T ss_pred eeCCCCCCHHHHHHHHHHHhC--CCCEEEEECChhccC-ccHHHHHHHHHhcCCCcEE--EEEEC-----CCcccCcEEE
Confidence 333344555 46788888774 366777779999988 5899999888542 34333 33333 567666544
Q ss_pred ECCCceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCC
Q 023786 193 VDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLH 242 (277)
Q Consensus 193 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~ 242 (277)
.+++|+++.|.+++. . ..+.+.++|+|+|++++++.+....
T Consensus 150 ~d~~g~v~~~~ekp~-~--------~~s~~~~~Giy~~~~~~l~~~~~~~ 190 (293)
T 1fxo_A 150 FDQGGKAISLEEKPL-E--------PKSNYAVTGLYFYDQQVVDIARDLK 190 (293)
T ss_dssp ECTTSCEEEEEESCS-S--------CSSSEEEEEEEEECTTHHHHHHHCC
T ss_pred ECCCCcEEEEEECCC-C--------CCCCeEEEEEEEEcHHHHHHHHhcC
Confidence 688899999988752 1 1346899999999999988775443
No 14
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.87 E-value=1.1e-21 Score=185.99 Aligned_cols=204 Identities=16% Similarity=0.174 Sum_probs=141.2
Q ss_pred CceEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHHcCCeEEecCCcCCC
Q 023786 48 SRVVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQFGADVIMTSESCRN 122 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~~g~~vi~~~~~~~~ 122 (277)
|++.|||||||.|+||+ ||+|++++|+|||+|+++++.+.+ +++|+|++++ +++.+++..+++.++.. ....
T Consensus 7 ~~~~aiIlA~G~g~Rl~~~~pK~l~~i~g~pli~~~l~~l~~~~-~~~i~vv~~~~~~~i~~~~~~~~~~~v~~--~~~~ 83 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYSDLPKVLHPLAGKPMVQHVIDAAMKLG-AQHVHLVYGHGGELLKKTLADPSLNWVLQ--AEQL 83 (459)
T ss_dssp CCEEEEEEECCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHHHT-CSCEEEEESSCHHHHHHHC-----CEEEC--SSCC
T ss_pred CcceEEEECCCCCccCCCCCCcccCeeCCeeHHHHHHHHHHhCC-CCcEEEEeCCCHHHHHHHhccCCcEEEeC--CCCC
Confidence 57899999999999997 499999999999999999999884 9999999964 56666666666776653 2234
Q ss_pred cH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEEEECCCceEEe
Q 023786 123 GT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIY 201 (277)
Q Consensus 123 g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v~~~~~g~~~~ 201 (277)
|+ .++..|++.+. +.|.+++++||+||+++++++++++.+.+ .++ ++...+. .++..+.++...+|++..
T Consensus 84 g~~~~i~~~~~~~~-~~~~~lv~~~D~P~i~~~~i~~l~~~~~~-~~~--~~~~~~~-----~~~~~~g~v~~~~g~v~~ 154 (459)
T 4fce_A 84 GTGHAMQQAAPHFA-DDEDILMLYGDVPLISVDTLQRLLAAKPE-GGI--GLLTVKL-----DNPSGYGRIVRENGDVVG 154 (459)
T ss_dssp CHHHHHHHHGGGSC-TTSEEEEEETTCTTCCHHHHHHHHHHCCT-TSE--EEEEEEC-----SCCTTSCEEEEETTEEEE
T ss_pred CcHHHHHHHHHhcC-CCCcEEEEeCCcccCCHHHHHHHHHHHhh-CCE--EEEEEec-----CCCCcccEEEeCCCcEEE
Confidence 44 67888988885 35899999999999999999999998765 243 3333332 334333333223789988
Q ss_pred eecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhc-cCC----CCCCCccccChHHHHHHHcCCeeEEEEee
Q 023786 202 FSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIY-PGL----HPTPLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 202 f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~-~~~----~~s~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
|.+++...+ .+..+.+.++|+|+|+++.|..+ ... ...+++..|.++. +.+.|.++..+..+
T Consensus 155 ~~ek~~~~~-----~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~--~~~~g~~v~~~~~~ 221 (459)
T 4fce_A 155 IVEHKDASD-----AQREINEINTGILVANGRDLKRWLSLLDNNNAQGEFYITDIIAL--AHADGKKIATVHPT 221 (459)
T ss_dssp EECGGGCCT-----TGGGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSCCTTHHHHH--HHHTTCCEEEECCS
T ss_pred EEECCCCCh-----HHhhccEEEEEEEEEEHHHHHHHHHHhCccccCCcEEHHHHHHH--HHHCCCeEEEEEcC
Confidence 877642211 12245789999999999877543 222 2233444444443 45678888887755
No 15
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.87 E-value=6.2e-21 Score=181.50 Aligned_cols=204 Identities=16% Similarity=0.150 Sum_probs=142.4
Q ss_pred eEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHHcCCeEEecCCcCCCcH
Q 023786 50 VVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQFGADVIMTSESCRNGT 124 (277)
Q Consensus 50 i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~~g~~vi~~~~~~~~g~ 124 (277)
..+||||||.||||+ ||+|++++|+|||+|+++++.++ ++++|+|++++ +++.+++.. ++.++..+ ...|+
T Consensus 12 ~~~vIlAaG~g~R~~~~~pK~l~~i~gkpli~~~l~~l~~~-g~~~iivv~~~~~~~i~~~~~~-~i~~v~~~--~~~G~ 87 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAI-QPEKTVTVVGHKAELVEEVLAG-QTEFVTQS--EQLGT 87 (468)
T ss_dssp EEEEEECCCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHTT-CCSEEEEEECTTHHHHHHSSSS-SSEEEECS--SCCCH
T ss_pred CcEEEEcCCCCccCCCCCCcEeeEECCccHHHHHHHHHHhc-CCCCEEEEECCCHHHHHHHhCC-CcEEEeCC--ccCCh
Confidence 469999999999996 69999999999999999999988 59999999975 444443332 56665532 23444
Q ss_pred -HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCce-EEEECCCceEEee
Q 023786 125 -ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRV-KCVVDNHGYAIYF 202 (277)
Q Consensus 125 -~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~-~v~~~~~g~~~~f 202 (277)
.++..|++.++...|.+++++||+||+++++++++++.+.+. ++.+++...+. .++..+ .+..+++|++..|
T Consensus 88 ~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~-~~~~~i~~~~~-----~~~~~~g~v~~d~~g~v~~~ 161 (468)
T 1hm9_A 88 GHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINH-KNVATILTAET-----DNPFGYGRIVRNDNAEVLRI 161 (468)
T ss_dssp HHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT-TCSEEEEEEEC-----SCCTTSCEEEECTTCCEEEE
T ss_pred HHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhc-CCcEEEEEecc-----CCCCceeEEEECCCCCEEEE
Confidence 568888888753358899999999999999999999988654 33344444443 344444 3456788999999
Q ss_pred ecCCcCCCCCCCCCCCCCceEEEEEEeecHHHH-hhccCCCCC----CCccccChHHHHHHHcCCeeEEEEee
Q 023786 203 SRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFL-KIYPGLHPT----PLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l-~~~~~~~~s----~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
.+++...+. +....+.++|+|+|+++.| +.+...... +++..|.++ .+++.|.++..+..+
T Consensus 162 ~ek~~~~~~-----~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~~d~~~--~l~~~g~~v~~~~~~ 227 (468)
T 1hm9_A 162 VEQKDATDF-----EKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIG--IFRETGEKVGAYTLK 227 (468)
T ss_dssp ECTTTCCTT-----GGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCTTHHHH--HHHHHTCCEEEEECS
T ss_pred EECCCCChH-----HhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEHHHHHH--HHHHCCCEEEEEEcC
Confidence 876521110 1135789999999999865 444333222 233334343 345778888887754
No 16
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.87 E-value=3.9e-21 Score=173.63 Aligned_cols=176 Identities=18% Similarity=0.199 Sum_probs=126.9
Q ss_pred CCCceEEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecC---chHHHHHHHH---cCCeE
Q 023786 46 FRSRVVGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATD---DEKIAECCQQ---FGADV 113 (277)
Q Consensus 46 ~~m~i~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~---~~~i~~~~~~---~g~~v 113 (277)
.+|+ +||||||.||||+ +|+|++++|+|||+|+++.+..+ ++++|+|++. .+.+.+++.. +|+++
T Consensus 2 ~~m~--aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~-gi~~Iivv~~~~~~~~i~~~l~~g~~~g~~i 78 (295)
T 1lvw_A 2 AHMK--GIVLAGGSGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLA-GIRDILIISTPRDLPLYRDLLGDGSQFGVRF 78 (295)
T ss_dssp CSCE--EEEECCCCCSTTTTTTTSSCGGGSEETTEETTHHHHHHHHHT-TCCEEEEEECTTTHHHHHHHHTTSGGGTSEE
T ss_pred CceE--EEEECCCCCCccccccCCCCceecEECCeeHHHHHHHHHHHC-CCCeEEEEeccchHHHHHHHhhhccccCceE
Confidence 4554 9999999999997 79999999999999999999987 5999998774 2556666653 67765
Q ss_pred EecCCcCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcC-CCcEEEEEeeecCCCCCCCCCceEE
Q 023786 114 IMTSESCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA-PDAVFSTAVTSLKPEDAFDPNRVKC 191 (277)
Q Consensus 114 i~~~~~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~-~~~~v~~~~~~~~~~~~~d~~~~~v 191 (277)
.+..+..+.|+ .++..|++.+. .+.++++.||+||++ .++.++++.+.+. .++.+ ...+. .||..+++
T Consensus 79 ~~~~~~~~~G~~~al~~a~~~i~--~~~~~lv~gD~~~~~-~~l~~~l~~~~~~~~~~~v--~~~~v-----~dp~~~g~ 148 (295)
T 1lvw_A 79 SYRVQEEPRGIADAFIVGKDFIG--DSKVALVLGDNVFYG-HRFSEILRRAASLEDGAVI--FGYYV-----RDPRPFGV 148 (295)
T ss_dssp EEEECSSCCCGGGHHHHTHHHHT--TSCEEEEETTCCEEC-TTHHHHHHHHHTCCSSEEE--EEEEC-----SCCTTSEE
T ss_pred EEeeCCCCCChHHHHHHHHHHhC--CCcEEEEECCccccC-cCHHHHHHHHHHcCCCcEE--EEEEC-----CCcccCCE
Confidence 43333334455 46788888774 244555569999988 6899999888542 34333 33333 46666554
Q ss_pred -EECCCceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCCC
Q 023786 192 -VVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHP 243 (277)
Q Consensus 192 -~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~ 243 (277)
..+++|+++.|.+++. . ..+.+.++|+|+|++++++.+....+
T Consensus 149 v~~d~~g~v~~~~ekp~-~--------~~s~~~~~Giy~f~~~~l~~~~~~~~ 192 (295)
T 1lvw_A 149 VEFDSEGRVISIEEKPS-R--------PKSNYVVPGLYFYDNQVVEIARRIEP 192 (295)
T ss_dssp EEECTTSBEEEEEESCS-S--------CSCSEECCSEEEECTTHHHHHHHCCC
T ss_pred EEECCCCcEEEEEECCC-C--------CCCCEEEEEeEEEcHHHHHHHHhcCC
Confidence 4588899999987752 1 13468999999999999887654433
No 17
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.86 E-value=4.3e-21 Score=173.42 Aligned_cols=174 Identities=20% Similarity=0.218 Sum_probs=125.3
Q ss_pred EEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecC---chHHHHHHHH---cCCeEEecCC
Q 023786 51 VGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATD---DEKIAECCQQ---FGADVIMTSE 118 (277)
Q Consensus 51 ~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~---~~~i~~~~~~---~g~~vi~~~~ 118 (277)
.+||||||.||||+ +|+|++++|+|||+|+++.+..+ ++++|+|+++ .+.+.+++.. +|+++.+..+
T Consensus 5 ~aIILAgG~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~-gi~~I~vv~~~~~~~~i~~~l~~g~~~g~~i~~~~~ 83 (296)
T 1mc3_A 5 KGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLA-GIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQ 83 (296)
T ss_dssp EEEEECCCCCGGGHHHHTTSCGGGSEETTEETTHHHHHHHHHT-TCCEEEEEECTTTHHHHHHHHTTSGGGTCEEEEEEC
T ss_pred EEEEECCCCCCcCCcccCCCCceeeEECCeeHHHHHHHHHHhC-CCCcEEEEechhHHHHHHHHHhcccccCceEEEecc
Confidence 49999999999997 79999999999999999999987 5999998774 2556666643 5776643323
Q ss_pred cCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHc-CCCcEEEEEeeecCCCCCCCCCceEE-EECC
Q 023786 119 SCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA-APDAVFSTAVTSLKPEDAFDPNRVKC-VVDN 195 (277)
Q Consensus 119 ~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~-~~~~~v~~~~~~~~~~~~~d~~~~~v-~~~~ 195 (277)
+.+.|+ .++..|++.+. .+.++++.||+||.+ .++.++++.+.+ ..++.+ ...+. .||..+++ ..++
T Consensus 84 ~~~~G~~~al~~a~~~i~--~~~~~lv~gD~~~~~-~~l~~~l~~~~~~~~~~~v--~~~~v-----~dp~~yg~v~~d~ 153 (296)
T 1mc3_A 84 PSPDGLAQAFIIGETFLN--GEPSCLVLGDNIFFG-QGFSPKLRHVAARTEGATV--FGYQV-----MDPERFGVVEFDD 153 (296)
T ss_dssp SSCCCSTHHHHHTHHHHT--TSCEEEEETTEEEEC-SSCHHHHHHHTTCCSSEEE--EEEEC-----SCCSSSBBCEEET
T ss_pred CCCCCHHHHHHHHHHHhC--CCCEEEEECCccccc-cCHHHHHHHHHHcCCCCEE--EEEEC-----CCcccCCEEEECC
Confidence 344555 46788888774 244555569999987 588999988753 234333 23333 45665543 4578
Q ss_pred CceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCCCC
Q 023786 196 HGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPT 244 (277)
Q Consensus 196 ~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~s 244 (277)
+|+++.|.+++. . ..+.+.++|+|+|++++++.+....++
T Consensus 154 ~g~v~~~~ekp~-~--------~~s~~~~~Giy~~~~~~l~~~~~~~~~ 193 (296)
T 1mc3_A 154 NFRAISLEEKPK-Q--------PKSNWAVTGLYFYDSKVVEYAKQVKPS 193 (296)
T ss_dssp TEEEEECCBSCS-S--------CSCSEEEEEEEECCTHHHHHHHSCCCC
T ss_pred CCcEEEEEECCC-C--------CCCCEEEEEEEEEcHHHHHHHHhcCcc
Confidence 899998877652 1 134689999999999999877655443
No 18
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.86 E-value=4e-21 Score=175.36 Aligned_cols=206 Identities=13% Similarity=0.129 Sum_probs=138.7
Q ss_pred eEEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHH-------------
Q 023786 50 VVGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQ------------- 108 (277)
Q Consensus 50 i~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~------------- 108 (277)
+.+||||||.||||+ ||+|++++|+|||+|+++++.++ ++++|+|++++ +.+.+++..
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~-gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~~~ 91 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAAEAAEL-GATRLAIITAPNKAGVLAHFERSSELEETLMERGK 91 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHTTC
T ss_pred eEEEEECCCCccccCccccCCCceeeeECCEEHHHHHHHHHHhC-CCCEEEEEecCcHHHHHHHHhccchhhhhhhccch
Confidence 459999999999994 89999999999999999999987 69999999985 566554421
Q ss_pred -----------cCCeEEecCCcCCCcHH-HHHHHHHHcccCCCEEEEEcCCcccCC-HHHHHHHHHHHHcCCCcEEEEEe
Q 023786 109 -----------FGADVIMTSESCRNGTE-RCNEALQKLEKKYDIVVNIQGDEPLIE-PEIIDGVVKALQAAPDAVFSTAV 175 (277)
Q Consensus 109 -----------~g~~vi~~~~~~~~g~~-~i~~al~~~~~~~d~vlv~~gD~P~i~-~~~i~~li~~~~~~~~~~v~~~~ 175 (277)
.|.++.+..+....|+. ++..|+..+..+.|.+++++||+|+ + +.+++.+++.+.+...+.+++
T Consensus 92 ~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~-~~~~~l~~l~~~~~~~~~~~i~~-- 168 (323)
T 2pa4_A 92 TDQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLV-LPTGVMERMAQVRAEFGGSVLCA-- 168 (323)
T ss_dssp HHHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEE-ESSCHHHHHHHHHHTTCSEEEEE--
T ss_pred hhhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCccc-CchHHHHHHHHHHHhcCCcEEEE--
Confidence 24554322233345654 5777777664334559999999999 6 689999999887643333332
Q ss_pred eecCCCCCCCCCceEEE-EC----CCc--eEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCCCC---C
Q 023786 176 TSLKPEDAFDPNRVKCV-VD----NHG--YAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPT---P 245 (277)
Q Consensus 176 ~~~~~~~~~d~~~~~v~-~~----~~g--~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~s---~ 245 (277)
.+... .++..++++ .+ .+| ++..|.+++.+. ...+.+.++|+|+|++++++.+....++ +
T Consensus 169 ~~~~~---~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~-------~~~~~~~~~GiY~~~~~~~~~l~~~~~~~~ge 238 (323)
T 2pa4_A 169 VEVSE---ADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIE-------DAPSRLAATGRYLLDRKIFDALRRITPGAGGE 238 (323)
T ss_dssp EECCG---GGGGGSEEEEEEECCSSTTEEEEEEEEESCCTT-------TCSCSEEEEEEEEEETHHHHHHHHCCCCGGGC
T ss_pred EEecc---cccCCccEEEeCCcccCCCceeEEEEEECCCCc-------cccccEEEEEEEEECHHHHHHHHhhCCCCCCe
Confidence 22211 233344433 33 343 888888875321 1135789999999999998877654432 3
Q ss_pred CccccChHHHHHHHcCCeeEEEEeee
Q 023786 246 LQLEEDLEQLKVLENGYKMKVQQTYF 271 (277)
Q Consensus 246 ~~~~d~l~~l~~le~g~~v~~~~~~~ 271 (277)
++..|.++. +++.|.++.++..+.
T Consensus 239 ~~l~d~i~~--l~~~g~~v~~~~~~g 262 (323)
T 2pa4_A 239 LQLTDAIDL--LIDEGHPVHIVIHQG 262 (323)
T ss_dssp CCHHHHHHH--HHHTTCCEEEEECCS
T ss_pred EeHHHHHHH--HHHcCCCEEEEEeCC
Confidence 333344443 357778888887654
No 19
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.86 E-value=1.4e-20 Score=169.69 Aligned_cols=202 Identities=14% Similarity=0.126 Sum_probs=139.2
Q ss_pred eEEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHH-------------
Q 023786 50 VVGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQ------------- 108 (277)
Q Consensus 50 i~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~------------- 108 (277)
+.|||||||.||||+ ||+|++++|+|||+|+++++.++ ++++|+|++++ +.+.+++..
T Consensus 9 ~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~-gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~ 87 (302)
T 2e3d_A 9 KKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAA-GITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVK 87 (302)
T ss_dssp CEEEEECCSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECGGGHHHHHHHSCCHHHHHHHC----
T ss_pred cEEEEECCcCcccCCccccCCCceeeEECCeEHHHHHHHHHHHC-CCCEEEEEeCCCHHHHHHHHhcchhhhhhhhhccc
Confidence 469999999999996 89999999999999999999988 69999999985 666666532
Q ss_pred ------------cCCeEEecCCcCCCcHH-HHHHHHHHcccCCCEEEEEcCCcccCC---HH---HHHHHHHHHHcCCCc
Q 023786 109 ------------FGADVIMTSESCRNGTE-RCNEALQKLEKKYDIVVNIQGDEPLIE---PE---IIDGVVKALQAAPDA 169 (277)
Q Consensus 109 ------------~g~~vi~~~~~~~~g~~-~i~~al~~~~~~~d~vlv~~gD~P~i~---~~---~i~~li~~~~~~~~~ 169 (277)
.++++.+..+....|+. ++..|+..+. .+.+++++||+|+-. +. +++++++.+.+. ++
T Consensus 88 ~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~--~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~-~~ 164 (302)
T 2e3d_A 88 RQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVG--DEPVAVILPDVILDEYESDLSQDNLAEMIRRFDET-GH 164 (302)
T ss_dssp CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHC--SSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHH-CC
T ss_pred hhhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcC--CCcEEEEcCCccccCccccchHHHHHHHHHHHHhc-CC
Confidence 25555333233445654 5888888774 367999999999731 45 799999988654 23
Q ss_pred EEEEEeeecCCCCCCCCCceEEEEC-----CCc---eEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCC
Q 023786 170 VFSTAVTSLKPEDAFDPNRVKCVVD-----NHG---YAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGL 241 (277)
Q Consensus 170 ~v~~~~~~~~~~~~~d~~~~~v~~~-----~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~ 241 (277)
+++.+.+. .++..++++.. .+| ++..|.+++.+. ...+++.++|+|+|++++++.+...
T Consensus 165 -~~i~~~~~-----~~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~-------~~~~~~~~~Giyi~~~~~l~~l~~~ 231 (302)
T 2e3d_A 165 -SQIMVEPV-----ADVTAYGVVDCKGVELAPGESVPMVGVVEKPKAD-------VAPSNLAIVGRYVLSADIWPLLAKT 231 (302)
T ss_dssp -EEEEEEEC-----SCGGGSEEEECTTCCCCTTCEEEECEEEESCCTT-------TCSCSEEEEEEEEECTTHHHHHTCC
T ss_pred -cEEEEEEc-----cCCCCccEEEecccccCCCCceeEEEEEECCCCC-------ccccceEEEEEEEECHHHHHHHHhh
Confidence 23333332 34455555542 556 777887775321 1135789999999999998877654
Q ss_pred CCC---CCccccChHHHHHHHcCCeeEEEEeee
Q 023786 242 HPT---PLQLEEDLEQLKVLENGYKMKVQQTYF 271 (277)
Q Consensus 242 ~~s---~~~~~d~l~~l~~le~g~~v~~~~~~~ 271 (277)
.++ +++..|.++. +++.| ++.++..+.
T Consensus 232 ~~~~~~~~~l~d~i~~--l~~~~-~v~~~~~~~ 261 (302)
T 2e3d_A 232 PPGAGDEIQLTDAIDM--LIEKE-TVEAYHMKG 261 (302)
T ss_dssp CC----CCCHHHHHHH--HHHHS-CEEEEECCS
T ss_pred CCCCCCceehHHHHHH--HHHhC-CEEEEEeCC
Confidence 332 3433344443 34666 787777653
No 20
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.85 E-value=1.4e-20 Score=164.35 Aligned_cols=193 Identities=22% Similarity=0.256 Sum_probs=130.5
Q ss_pred ceEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCchHHH---HHHHHcCCeEEecCCcCCC
Q 023786 49 RVVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIA---ECCQQFGADVIMTSESCRN 122 (277)
Q Consensus 49 ~i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~---~~~~~~g~~vi~~~~~~~~ 122 (277)
++.+||||||+|+||+ +|++++++|+|||+|+++++.+++.+++|+|+++++++. +.+.. ++.++.. . .+
T Consensus 7 ~~~aIIlAaG~g~Rmg~~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~-~v~~v~g-g--~~ 82 (231)
T 3q80_A 7 EVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH-RAMIVAG-G--SN 82 (231)
T ss_dssp CEEEEEECCCCCTTTCSSSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG-GCEEEEC-C--SS
T ss_pred ceEEEEECCCCCccCCCCCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC-CeEEEcC-C--Cc
Confidence 3789999999999997 799999999999999999999886799999999875543 33322 4444421 1 12
Q ss_pred cHHHHHHHHHHcccC--CCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEEEECCCceEE
Q 023786 123 GTERCNEALQKLEKK--YDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAI 200 (277)
Q Consensus 123 g~~~i~~al~~~~~~--~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v~~~~~g~~~ 200 (277)
...++.+|++.+... .|++++++||+||+++++|+++++.+.++.++.++ ..+. .|+ ++. .+.+|.+.
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~~i~--~~p~-----~dt--~~~-~~~~g~v~ 152 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVP--VLPL-----SDT--IKA-VDANGVVL 152 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHTTCSEEEE--EECC-----SSC--EEE-ECTTSBEE
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhhcCCeEEE--EEec-----cCC--EEE-EcCCCcEE
Confidence 246789999888532 58999999999999999999999998763354443 2332 222 332 36667663
Q ss_pred eeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccC-CCC--CCCccccChHHHHHHHcCCeeEEEEee
Q 023786 201 YFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPG-LHP--TPLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 201 ~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~-~~~--s~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
. .+ + + ..-+..+ ..|+|+.+.|..... ... ..++.+|+...+. ..|.+++.++.+
T Consensus 153 ~---~~-~--r------~~l~~~q-TPq~F~~~~L~~a~~~~~~~n~~~~~TD~~~~~~--~~g~~v~~v~g~ 210 (231)
T 3q80_A 153 G---TP-E--R------AGLRAVQ-TPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVE--HIGGQVQVVDGD 210 (231)
T ss_dssp E---CC-C--G------GGEEEEC-SCEEEEHHHHHHHHHHHTC-----CCSSSHHHHH--HTTCCCEEEECC
T ss_pred E---ec-c--h------hheEEEc-CCcEEEHHHHHHHHHHHHhhcCCCCCCcHHHHHH--HcCCcEEEEECC
Confidence 2 11 1 1 0112333 468999888765532 111 1355568777665 578899887754
No 21
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.85 E-value=1.9e-20 Score=177.20 Aligned_cols=205 Identities=13% Similarity=0.167 Sum_probs=140.8
Q ss_pred CCceEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHHcCCeEEecCCcCC
Q 023786 47 RSRVVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQFGADVIMTSESCR 121 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~~g~~vi~~~~~~~ 121 (277)
+|++.|||||||.|+||+ +|+|++++|+|||+|+++++.++ ++++|+|++++ +++.+++.+++++++..+ ...
T Consensus 3 ~~~~~aiIlA~G~g~Rl~~~~pK~l~~i~gkpli~~~l~~l~~~-~~~~iivv~~~~~~~i~~~~~~~~~~~v~~~-~~~ 80 (456)
T 2v0h_A 3 KKALSAVILAAGKGTRMYSDLPKVLHTIAGKPMVKHVIDTAHQL-GSENIHLIYGHGGDLMRTHLANEQVNWVLQT-EQL 80 (456)
T ss_dssp -CCEEEEEECCCCCGGGCSSSCGGGSEETTEEHHHHHHHHHHHT-TCSCEEEEECTTHHHHHHHTTTCCCEEEECS-CCC
T ss_pred CCcceEEEECCCCCcccCCCCCccccEECCccHHHHHHHHHHhC-CCCcEEEEeCCCHHHHHHHhhcCCcEEEeCC-CCC
Confidence 367889999999999996 79999999999999999999988 59999999985 556666655567766532 222
Q ss_pred CcHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCce-EEEECCCceEE
Q 023786 122 NGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRV-KCVVDNHGYAI 200 (277)
Q Consensus 122 ~g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~-~v~~~~~g~~~ 200 (277)
+...++.++++.++ +.+.+++++||+||+++++++++++.+.+ .+. ++...+. .+|..+ .+..+ +|++.
T Consensus 81 g~~~~~~~~~~~~~-~~~~vlv~~~D~P~i~~~~i~~l~~~~~~-~~~--~~~~~~~-----~~~~~~g~v~~~-~g~v~ 150 (456)
T 2v0h_A 81 GTAHAVQQAAPFFK-DNENIVVLYGDAPLITKETLEKLIEAKPE-NGI--ALLTVNL-----DNPTGYGRIIRE-NGNVV 150 (456)
T ss_dssp CHHHHHHHHGGGCC-TTSEEEEEETTCTTCCHHHHHHHHHHCCT-TSE--EEEEEEC-----SSCTTSCEEEEE-TTEEE
T ss_pred CcHHHHHHHHHhcC-CCCeEEEEcCCcceeCHHHHHHHHHHHhc-CCE--EEEEeec-----CCCCccceEEEc-CCcEE
Confidence 33457888888774 25899999999999999999999988755 333 3333332 234332 23445 78888
Q ss_pred eeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHh-hccCCCC----CCCccccChHHHHHHHcCCeeEEEEee
Q 023786 201 YFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLK-IYPGLHP----TPLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 201 ~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~-~~~~~~~----s~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
.|.+++...+ .+....+.++|+|+|+++.|. .+..... .+++..|.++. +.+.|.++..++.+
T Consensus 151 ~~~ek~~~~~-----~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~--~~~~g~~v~~~~~~ 218 (456)
T 2v0h_A 151 AIVEQKDANA-----EQLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIAL--ANQDNCQVVAVQAT 218 (456)
T ss_dssp EEECTTTCCH-----HHHTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCCGGGHHHH--HHHTTCCEEEEECS
T ss_pred EEEECCCCCh-----hHhcCcEEEEEEEEEEHHHHHHHHHHhccccccccEEHHHHHHH--HHHcCCEEEEEEeC
Confidence 8876532110 011357899999999998664 3332221 22333344443 34677788877763
No 22
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.85 E-value=3.7e-20 Score=167.62 Aligned_cols=214 Identities=11% Similarity=0.075 Sum_probs=144.1
Q ss_pred CCCceEEEEecCCCCcccc-ccccccc--cccchHHHHHHHHhccCCCCeEEEecCc---hHHHHHHHH---cCCeE--E
Q 023786 46 FRSRVVGIIPARFASSRFE-GKPLVNI--LGKPMIQRTWERSKLATTLDHLVVATDD---EKIAECCQQ---FGADV--I 114 (277)
Q Consensus 46 ~~m~i~aIIlAaG~ssRl~-~K~l~~i--~GkpLi~~~i~~l~~~~~i~~IvVvt~~---~~i~~~~~~---~g~~v--i 114 (277)
.||++.+||||||.||||+ +|+|+++ +|+|||+|+++++.++ ++++|+|++++ +.+.+++.. .+.++ +
T Consensus 2 ~~m~~~~vIlAaG~g~R~~~~K~l~~ig~~g~pli~~~l~~~~~~-~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (303)
T 3pnn_A 2 NAMKPTLFVLAAGMGSRYGSLKQLDGIGPGGDTIMDYSVYDAIRA-GFGRLVFVIRHSFEKEFREKILTKYEGRIPVELV 80 (303)
T ss_dssp -CCCCEEEEECTTCBCTTSSBCCCCCCSTTSCCHHHHHHHHHHHH-TCCEEEEEECGGGHHHHHHHTHHHHTTTSCEEEE
T ss_pred CCCceEEEEECCCCcccCCCCceEeEcCCCCeeHHHHHHHHHHHC-CCCeEEEEcCchHHHHHHHHHHHHhccCCcEEEE
Confidence 4688899999999999995 7999999 6999999999999887 69999999984 345555432 23333 3
Q ss_pred ecCC-------------cCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHc--CCCcEEEEEeeec
Q 023786 115 MTSE-------------SCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA--APDAVFSTAVTSL 178 (277)
Q Consensus 115 ~~~~-------------~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~--~~~~~v~~~~~~~ 178 (277)
.... ..+.|+ .++..|++.+ .+.+++++||. +++.+.++.+++.+.+ ..++.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i---~~~~lV~~gD~-l~~~~~~~~l~~~~~~~~~~~~~~~v~~~~~ 156 (303)
T 3pnn_A 81 FQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAI---REPFAVINADD-FYGRNGFEVLARKLMTLEGKQGEYCMVGYRV 156 (303)
T ss_dssp ECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTC---CSCEEEEESSC-BCCHHHHHHHHHHHHTTTTCSSEEEEEEEEG
T ss_pred ecccccccccccccccccccCCcHHHHHHHHHhc---CCCEEEEECCe-ecCHHHHHHHHHHHHHhccccCceEEEEEEC
Confidence 3221 024565 3566666666 25689999999 7788889999998864 1245556555443
Q ss_pred CCCCCCCC-Cce------EEEECCCceEEeeecCCcCCCCCC----CCCC------CCCceEEEEEEeecHHHHhhccC-
Q 023786 179 KPEDAFDP-NRV------KCVVDNHGYAIYFSRGLIPYNKSG----KVNP------QFPYLLHLGIQSYDSNFLKIYPG- 240 (277)
Q Consensus 179 ~~~~~~d~-~~~------~v~~~~~g~~~~f~~~~~~~~~~~----~~~~------~~~~~~~~Giy~~~~~~l~~~~~- 240 (277)
.+| ..+ .+..+++|+++.|.+++.....+. ...+ ..+.+.++|+|+|++++|+.+..
T Consensus 157 -----~~~~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~~i~~GiY~f~~~~~~~l~~~ 231 (303)
T 3pnn_A 157 -----GNTLSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSMNMWGFTPDYFDYSEEL 231 (303)
T ss_dssp -----GGSCBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTCEEEEEEEEECTHHHHHHHHH
T ss_pred -----CCccCccCceeeeeEeeCCCCcEEEEEECCCCccccccccccccccccccCCCCCEEEEEEEEECHHHHHHHHHH
Confidence 233 222 345677899999988763210000 0000 13679999999999999887642
Q ss_pred ----------CCCCCCccccChHHHHHHHcCC-eeEEEEeee
Q 023786 241 ----------LHPTPLQLEEDLEQLKVLENGY-KMKVQQTYF 271 (277)
Q Consensus 241 ----------~~~s~~~~~d~l~~l~~le~g~-~v~~~~~~~ 271 (277)
....+++..|.++. +++.|. ++.++..++
T Consensus 232 ~~~~l~~~~~~~~~e~~l~d~i~~--li~~g~~~v~~~~~~g 271 (303)
T 3pnn_A 232 FINFLNAHGQEPKSEFFIPFVVND--LIRSGRASVEVLDTTA 271 (303)
T ss_dssp HHHHHHHHTTCSSCCCCHHHHHHH--HHHHTSCEEEEEECSC
T ss_pred HHHHHHhcCCCcCCcEEhHHHHHH--HHHcCCCcEEEEEeCC
Confidence 22344554455543 457786 898888654
No 23
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.85 E-value=1.9e-20 Score=164.46 Aligned_cols=196 Identities=19% Similarity=0.204 Sum_probs=122.9
Q ss_pred CCceEEEEecCCCCcccc----ccccccccccchHHHHHHHHhccCCCCeEEEecCchH---HHHHHHHcCC--eEEecC
Q 023786 47 RSRVVGIIPARFASSRFE----GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEK---IAECCQQFGA--DVIMTS 117 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~----~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~---i~~~~~~~g~--~vi~~~ 117 (277)
||++.+||||||.||||+ ||++++++|+|||+|+++++.+++.+++|+|+++++. +.+.++.++. .+...+
T Consensus 1 M~~~~aIIlAaG~g~Rm~~~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (246)
T 3f1c_A 1 MSLIYAQILAGGKGTRMGNVSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISDDRIVVIE 80 (246)
T ss_dssp -CCEEEEEECC-----C-CSSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCCTTEEEEE
T ss_pred CCccEEEEECCccccccCCCCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 567899999999999996 4999999999999999999998866999999998643 3344555432 222211
Q ss_pred CcCCCcHHHHHHHHHHccc-----CCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEEE
Q 023786 118 ESCRNGTERCNEALQKLEK-----KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 192 (277)
Q Consensus 118 ~~~~~g~~~i~~al~~~~~-----~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v~ 192 (277)
. -.+...++.+|++.+.. +.|++++++||+||+++++++++++.+.+. ++.+++ .+. .| + ++
T Consensus 81 ~-~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~-~a~i~~--~~~-----~d--~--i~ 147 (246)
T 3f1c_A 81 G-GEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALET-GAVDTV--IEA-----LD--T--IV 147 (246)
T ss_dssp C-CSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHT-SEEEEE--EEC-----SS--C--EE
T ss_pred C-CCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhc-CCEEEE--Eec-----cc--e--EE
Confidence 1 12334578888888753 368999999999999999999999998775 444442 222 12 2 23
Q ss_pred EC-CCceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhcc-CC-CCCCCccccChHHHHHHHcCCeeEEEEe
Q 023786 193 VD-NHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYP-GL-HPTPLQLEEDLEQLKVLENGYKMKVQQT 269 (277)
Q Consensus 193 ~~-~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~-~~-~~s~~~~~d~l~~l~~le~g~~v~~~~~ 269 (277)
.. .++.+....+ + ...+..-..++|+.+.|.... .. ....++.+|+...+ ...|.++..++.
T Consensus 148 ~~~~~~~v~~~~~------r-------~~l~~~qtpq~f~~~~L~~a~~~~~~~~~~~~TD~~~~~--~~~g~~v~~v~~ 212 (246)
T 3f1c_A 148 ESSNHEVITDIPV------R-------DHMYQGQTPQSFNMKKVFNHYQNLTPEKKQILTDACKIC--LLAGDDVKLVKG 212 (246)
T ss_dssp ECSSSSBCCBCCC------G-------GGEEEEEEEEEEEHHHHHHHHHTSCHHHHHHCCCHHHHH--HHTTCCCEEEEC
T ss_pred EecCCCeEEEecC------h-------HHhhhhcCCceeEHHHHHHHHHHHHHcCCCccCcHHHHH--HHcCCCEEEEeC
Confidence 33 3343321111 1 123444467899877765543 22 11224445655544 367888888875
Q ss_pred e
Q 023786 270 Y 270 (277)
Q Consensus 270 ~ 270 (277)
+
T Consensus 213 ~ 213 (246)
T 3f1c_A 213 E 213 (246)
T ss_dssp C
T ss_pred C
Confidence 4
No 24
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.84 E-value=5.6e-21 Score=172.05 Aligned_cols=206 Identities=11% Similarity=0.126 Sum_probs=124.9
Q ss_pred CceEEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecC--chHHHHHHHH-----------
Q 023786 48 SRVVGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATD--DEKIAECCQQ----------- 108 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~--~~~i~~~~~~----------- 108 (277)
+.+.|||||||.||||+ ||+|++++|+|||+|+++++.++ ++++|+|+++ .+.+.+++..
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~-g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 91 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEA-GIEQMIFVTGRGKSALEDHFDIAYELEATMAAR 91 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECTTCHHHHHHTSCCHHHHHHHHTT
T ss_pred CccEEEEECCCCccccCccccCCCceeeeECCeEHHHHHHHHHHhC-CCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhhc
Confidence 34679999999999995 89999999999999999999988 6999999998 4667666532
Q ss_pred ------------cCCeEEecCCcCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCC-HHHHHHHHHHHHcCCCcEEEEE
Q 023786 109 ------------FGADVIMTSESCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIE-PEIIDGVVKALQAAPDAVFSTA 174 (277)
Q Consensus 109 ------------~g~~vi~~~~~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~-~~~i~~li~~~~~~~~~~v~~~ 174 (277)
.+.++.+..+....|+ .++..|++.+. .+.+++++||+|+-. +.+++++++.+.+...+.+++
T Consensus 92 ~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~--~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~~~i~~- 168 (297)
T 2ux8_A 92 GKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVG--DEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGGNLICA- 168 (297)
T ss_dssp TCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHC--SSCEEEECTTEEEESSSCHHHHHHHHHHHHCSEEEEE-
T ss_pred cchhhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcC--CCcEEEEeCCeecCCChHHHHHHHHHHHhcCCCEEEE-
Confidence 2444433223334555 45777887774 478999999999532 578999999886532233332
Q ss_pred eeecCCCCCCCCCceEEEE-CC--Cc--eEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCCC---CCC
Q 023786 175 VTSLKPEDAFDPNRVKCVV-DN--HG--YAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHP---TPL 246 (277)
Q Consensus 175 ~~~~~~~~~~d~~~~~v~~-~~--~g--~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~---s~~ 246 (277)
.+.. ..++..++++. ++ +| ++..|.+++.+. ...+.+.++|+|+|++++++.+....+ .++
T Consensus 169 -~~~~---~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~-------~~~~~~~~~Giyi~~~~~l~~l~~~~~~~~~~~ 237 (297)
T 2ux8_A 169 -EEVP---DDQTHRYGIITPGTQDGVLTEVKGLVEKPAPG-------TAPSNLSVIGRYILQPEVMRILENQGKGAGGEI 237 (297)
T ss_dssp -C--------------CCCCCCBCSSEEEC---------------------CCCEEEEEEECTHHHHHHHHTC-------
T ss_pred -EecC---cccCCCCCeEEecccCCCceeEEEEEECCCCC-------CCCccEEEEEEEEECHHHHHHHHhhCCCCCCee
Confidence 2221 12444455443 32 44 677777765321 113468899999999998877654332 244
Q ss_pred ccccChHHHHHHHcCCeeEEEEeee
Q 023786 247 QLEEDLEQLKVLENGYKMKVQQTYF 271 (277)
Q Consensus 247 ~~~d~l~~l~~le~g~~v~~~~~~~ 271 (277)
+..|.++.+ ++.| ++.++..+.
T Consensus 238 ~l~d~i~~l--~~~~-~v~~~~~~~ 259 (297)
T 2ux8_A 238 QLTDAMQRM--IGDQ-PFHGVTFQG 259 (297)
T ss_dssp -CCTTGGGG--TTTS-CEEEEECSS
T ss_pred EHHHHHHHH--HhcC-CEEEEEecc
Confidence 444555543 3454 777776554
No 25
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.82 E-value=6e-19 Score=151.41 Aligned_cols=142 Identities=25% Similarity=0.344 Sum_probs=100.6
Q ss_pred CceEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHc-CCeEEecCCcCCCc
Q 023786 48 SRVVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNG 123 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~-g~~vi~~~~~~~~g 123 (277)
|++.+||||||+||||+ +|++++++|+|||+|+++++.+++.+++|+|+++++....+.... +..+....+ ..+.
T Consensus 1 m~~~~vIlA~G~g~R~~~~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~~v~~~~~-~~~~ 79 (223)
T 2xwl_A 1 MATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGGEDSVIVSG-GVDR 79 (223)
T ss_dssp -CEEEEEECCCCCGGGTSSSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTCBTTEEEEEC-CSSH
T ss_pred CceEEEEECCccCcccCCCCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhccCCeEEEcC-CCCH
Confidence 57889999999999998 899999999999999999999875589999999875432222222 222322212 2345
Q ss_pred HHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHH-HcCCCcEEEEEeeecCCCCCCCCCceEEEECCCceEEee
Q 023786 124 TERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL-QAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYF 202 (277)
Q Consensus 124 ~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~-~~~~~~~v~~~~~~~~~~~~~d~~~~~v~~~~~g~~~~f 202 (277)
..++..|++.++ +.+.+++++||+||+++++++++++.+ .+ .++.++ +.+. .|+ .+.+ +.+|++..+
T Consensus 80 ~~~i~~al~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~-~~~~i~--~~~~-----~d~--~~~~-~~~g~~~~~ 147 (223)
T 2xwl_A 80 TESVALALEAAG-DAEFVLVHDAARALTPPALIARVVAALKEG-HSAVVP--GLAP-----ADT--IKAV-DANGAVLGT 147 (223)
T ss_dssp HHHHHHHHTTCT-TCSEEEECCTTCTTCCHHHHHHHHHHHHHT-CSEEEE--EECC-----SSC--EEEE-CTTSBEEEC
T ss_pred HHHHHHHHHhcC-CCCEEEEEcCCcccCCHHHHHHHHHHHhhc-CCeEEE--EEec-----ccc--eEEE-cCCCcEEee
Confidence 567888988773 457899999999999999999999988 44 344333 2222 233 2222 667777544
No 26
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.82 E-value=4.7e-19 Score=160.59 Aligned_cols=178 Identities=11% Similarity=0.109 Sum_probs=117.6
Q ss_pred CceEEEEecCCCCccc-------cccccccc-cccchHHHHHHHHhccCCCCeEEEecCch---HHHHHHHH-cCC-eEE
Q 023786 48 SRVVGIIPARFASSRF-------EGKPLVNI-LGKPMIQRTWERSKLATTLDHLVVATDDE---KIAECCQQ-FGA-DVI 114 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl-------~~K~l~~i-~GkpLi~~~i~~l~~~~~i~~IvVvt~~~---~i~~~~~~-~g~-~vi 114 (277)
|++.+||||||.|||| .||+|+++ +|+|||+|+++++.++ +++|+|+++++ .+.+++.. +++ ++.
T Consensus 3 ~~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~pli~~~l~~l~~~--~~~i~vv~~~~~~~~i~~~~~~~~~~~~~~ 80 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASL--VDETLIVCNEKHYFLALEEIKNEIKNKSVG 80 (308)
T ss_dssp CCEEEEEECC-------------CCGGGCTTBTTBCHHHHHHHHHHTT--CSEEEEEEEGGGHHHHHHHTTTTCSSCEEE
T ss_pred CccEEEEEcCCCCccCCccCCCCCCCEEEECCCCCCHHHHHHHHHHcc--CCCEEEEEChhHHHHHHHHHHHhhCCCccE
Confidence 4578999999999999 27999999 5999999999999886 89999999853 55666666 565 432
Q ss_pred ecCCcCCCcHH-HHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHH---HHcCCCcEEEEEeeecCCCCCCCCCceE
Q 023786 115 MTSESCRNGTE-RCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKA---LQAAPDAVFSTAVTSLKPEDAFDPNRVK 190 (277)
Q Consensus 115 ~~~~~~~~g~~-~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~---~~~~~~~~v~~~~~~~~~~~~~d~~~~~ 190 (277)
+..++...|+. ++..++..+. ..+.+++++||+|+.+.+.++++++. +.+. ++.+++.+.+. .++..++
T Consensus 81 ~i~~~~~~gt~~al~~a~~~l~-~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~~-----~~~~~~g 153 (308)
T 2qh5_A 81 FLLESLSKNTANAIALSALMSD-KEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQK-GFLVTFGVSID-----KPNTEFG 153 (308)
T ss_dssp EEEESSCCCHHHHHHHHHHTSC-TTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHT-TCEEEEEEECS-----SCCTTSE
T ss_pred EEeCCCCCChHHHHHHHHHHhC-CCCeEEEEcCCccccCHHHHHHHHHHHHHHHhc-CCEEEEEEecC-----CCCCCce
Confidence 22233445664 5777877773 24569999999999888889999986 4443 44555544443 2334455
Q ss_pred EEE-CCCceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHH
Q 023786 191 CVV-DNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFL 235 (277)
Q Consensus 191 v~~-~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l 235 (277)
++. +.+|++..|.+++.+..... .....+++.|+|+|+|+++.|
T Consensus 154 ~i~~d~~~~V~~~~Ekp~~~~~~~-~~~~g~~~~n~Giy~~~~~~l 198 (308)
T 2qh5_A 154 YIESPNGLDVKRFIEKPSLDKAIE-FQKSGGFYFNSGMFVFQAGVF 198 (308)
T ss_dssp EEECSSSSBCSEEEESCCHHHHHH-HHHHCCEEEEEEEEEEEHHHH
T ss_pred EEEECCCCEEEEEEECCChHHHHH-HhhcCCeEEEeEEEEEEHHHH
Confidence 443 55788989988763211000 000014789999999998775
No 27
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.82 E-value=1.6e-19 Score=155.84 Aligned_cols=118 Identities=19% Similarity=0.257 Sum_probs=88.8
Q ss_pred CceEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCchH--HHHHH-HHcCCeEEecCCcCC
Q 023786 48 SRVVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEK--IAECC-QQFGADVIMTSESCR 121 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~--i~~~~-~~~g~~vi~~~~~~~ 121 (277)
|++.+||||||.||||+ +|+|++++|+|||+|+++++.+++++++|+|+++++. +.+.+ ..++..+.+..+ ..
T Consensus 3 ~~~~aiIlAaG~g~R~~~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~v~~~~~-~~ 81 (228)
T 2yc3_A 3 KSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLSFAIP-GK 81 (228)
T ss_dssp TCEEEEEECCCCC-------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTTTSSSEEEEECC-CS
T ss_pred cceEEEEECCccccccCCCCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHHhCCCcEEEECC-CC
Confidence 46889999999999998 8999999999999999999998766899999998643 33322 234444432221 13
Q ss_pred CcHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcC
Q 023786 122 NGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166 (277)
Q Consensus 122 ~g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~ 166 (277)
+...++..|++.+..+.+.+++++||+||+++++++.+++.+.+.
T Consensus 82 ~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~ 126 (228)
T 2yc3_A 82 ERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAV 126 (228)
T ss_dssp SHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHHHHhc
Confidence 445678889988754468899999999999999999999988653
No 28
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.82 E-value=1.4e-19 Score=152.31 Aligned_cols=114 Identities=20% Similarity=0.320 Sum_probs=94.7
Q ss_pred CceEEEEecCCCCccc-cccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHHcCCeEEecCCcCCCcH
Q 023786 48 SRVVGIIPARFASSRF-EGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQFGADVIMTSESCRNGT 124 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl-~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~~g~~vi~~~~~~~~g~ 124 (277)
|++.+||||||.|||| .+|++++++|+|||+|+++++.+++ +++|+|++++ +++.+++..++++++..+....|..
T Consensus 4 ~~~~~iIlA~G~~~R~g~~K~l~~~~g~pli~~~l~~l~~~~-~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 82 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCP-FDQLIVTLGGAADEVLEKVELDGLDIVLVDDAGLGCS 82 (199)
T ss_dssp CCEEEEEEESSCCTTTTSCGGGCEETTEEHHHHHHHHHHTSS-CSEEEEEECTTHHHHHHHSCCTTSEEEECCCCCTTCC
T ss_pred CceEEEEECCCCCCCCCCCEEeCEeCccCHHHHHHHHHHhCC-CCcEEEEeCCCHHHHHHHhccCCCEEEECCCcccCHH
Confidence 5688999999999999 5899999999999999999999884 8999999974 4555555556788776544333445
Q ss_pred HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHH
Q 023786 125 ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKA 162 (277)
Q Consensus 125 ~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~ 162 (277)
.++..|++.+..+.+.+++++||+||+++++++++++.
T Consensus 83 ~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 83 SSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp CHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 67899998874336899999999999999999999987
No 29
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.81 E-value=2.5e-19 Score=157.30 Aligned_cols=195 Identities=15% Similarity=0.183 Sum_probs=127.2
Q ss_pred CceEEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecC--chHHHHHHHHc-----CCeE-
Q 023786 48 SRVVGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATD--DEKIAECCQQF-----GADV- 113 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~--~~~i~~~~~~~-----g~~v- 113 (277)
|++.|||||||.||||+ ||+|++++|+|||+|+++++.++ ++++|+|+++ .+.+.+++.++ ++.+
T Consensus 1 m~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gkpli~~~l~~l~~~-g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~ 79 (259)
T 1tzf_A 1 MASKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVH-GIKDFIICCGYKGYVIKEYFANYFLHMSDVTFH 79 (259)
T ss_dssp CCCEEEEEECSCC--------CCCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEE
T ss_pred CCcEEEEECCCCcccCCCccCCCCccccEECCEEHHHHHHHHHHHC-CCCEEEEEcccCHHHHHHHHhhccccccccccc
Confidence 45679999999999996 79999999999999999999988 5999999995 45676766542 3333
Q ss_pred -------EecC-----------CcCCCcHH-HHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEE
Q 023786 114 -------IMTS-----------ESCRNGTE-RCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTA 174 (277)
Q Consensus 114 -------i~~~-----------~~~~~g~~-~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~ 174 (277)
+.++ +....|+. ++..|++.+. ..+.+++++||. +. ..+++++++.+.+. ++.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~-~~~~~lv~~~D~-~~-~~~~~~~~~~~~~~-~~~~t~~ 155 (259)
T 1tzf_A 80 MAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVK-DDEAFLFTYGDG-VA-DLDIKATIDFHKAH-GKKATLT 155 (259)
T ss_dssp GGGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTT-TSSCEEEEETTE-EE-CCCHHHHHHHHHHH-CCSEEEE
T ss_pred ccccceeeeeccccccceeeeecccccCcHHHHHHHHHhcC-CCCcEEEEECCE-ec-ccCHHHHHHHHHHh-CCeEEEE
Confidence 1111 11234554 5777777663 246799999999 43 46799999888643 2334432
Q ss_pred eeecCCCCCCCCCceE-EEECCCceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCCCCCCccccChH
Q 023786 175 VTSLKPEDAFDPNRVK-CVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLE 253 (277)
Q Consensus 175 ~~~~~~~~~~d~~~~~-v~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~s~~~~~d~l~ 253 (277)
.. .++..++ +..+ +|++..|.+++.+ ...+.|+|+|+|++++|+.+... ...++ .|.++
T Consensus 156 ~~-------~~~~~~g~v~~~-~g~v~~~~ekp~~----------~~~~~~~Giy~~~~~~l~~l~~~-~~~~~-~~~i~ 215 (259)
T 1tzf_A 156 AT-------FPPGRFGALDIQ-AGQVRSFQEKPKG----------DGAMINGGFFVLNPSVIDLIDND-ATTWE-QEPLM 215 (259)
T ss_dssp EE-------CCCCCSEEEEEE-TTEEEEEEESCSC----------CSCCEECCCEEECGGGGGGCCST-TCCTT-THHHH
T ss_pred Ee-------cCCCCccEEEEc-CCEEEEEEecCCC----------CCceEEEEEEEeCHHHHHhhccc-ccccH-HHHHH
Confidence 22 2344454 3345 7899999876521 13589999999999999766321 12232 24343
Q ss_pred HHHHHHcCCeeEEEEee
Q 023786 254 QLKVLENGYKMKVQQTY 270 (277)
Q Consensus 254 ~l~~le~g~~v~~~~~~ 270 (277)
. +++.| ++..+..+
T Consensus 216 ~--~~~~~-~v~~~~~~ 229 (259)
T 1tzf_A 216 T--LAQQG-ELMAFEHP 229 (259)
T ss_dssp H--HHHTT-CEEEEEEC
T ss_pred H--HHHcC-CEEEEEeC
Confidence 3 34555 57666654
No 30
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.81 E-value=2.9e-19 Score=154.49 Aligned_cols=117 Identities=15% Similarity=0.204 Sum_probs=83.9
Q ss_pred eEEEEecCCCCccccc----cccccccccchHHHHHHHHhccCCCCeEEEecCchH---HHHHHHHcCCeEEecCCcC--
Q 023786 50 VVGIIPARFASSRFEG----KPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEK---IAECCQQFGADVIMTSESC-- 120 (277)
Q Consensus 50 i~aIIlAaG~ssRl~~----K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~---i~~~~~~~g~~vi~~~~~~-- 120 (277)
+.+||||||.||||++ |++++++|+|||+|+++++.+++++++|+|+++++. +.+++..+++.+....+..
T Consensus 3 ~~~iIlA~G~g~R~~~~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGISNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPLYKERIIITKG 82 (236)
T ss_dssp EEEEEEEC-----------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHHHCGGGGGGEEEEEC
T ss_pred eEEEEeCCccccccCCCCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHhccccccCceEEECC
Confidence 5699999999999975 999999999999999999998766999999998644 6666666662221111111
Q ss_pred -CCcHHHHHHHHHHcc---c--CCCEEEEEcCCcccCCHHHHHHHHHHHHcC
Q 023786 121 -RNGTERCNEALQKLE---K--KYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166 (277)
Q Consensus 121 -~~g~~~i~~al~~~~---~--~~d~vlv~~gD~P~i~~~~i~~li~~~~~~ 166 (277)
.+...++.+|++.+. . +.+++++++||+||+++++++++++.+.+.
T Consensus 83 ~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2vsh_A 83 GADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNH 134 (236)
T ss_dssp CSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 233456888888773 2 348899999999999999999999988764
No 31
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.80 E-value=2.3e-19 Score=150.98 Aligned_cols=114 Identities=18% Similarity=0.336 Sum_probs=92.7
Q ss_pred CceEEEEecCCCCccc-cccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHHcCCeEEecCCcCCCcH
Q 023786 48 SRVVGIIPARFASSRF-EGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQFGADVIMTSESCRNGT 124 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl-~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~~g~~vi~~~~~~~~g~ 124 (277)
|++.+||||||.|+|| .+|++++++|+|||+|+++++.+. ++++|+|++++ +++.+++..++++++..+....|..
T Consensus 4 ~~~~~iIlA~G~~~R~g~~K~l~~~~g~pll~~~l~~l~~~-~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 82 (197)
T 2wee_A 4 TQITGVVLAAGRSNRLGTPKQLLPYRDTTVLGATLDVARQA-GFDQLILTLGGAASAVRAAMALDGTDVVVVEDVERGCA 82 (197)
T ss_dssp SEEEEEEEECCCCTTTSSCGGGSEETTEEHHHHHHHHHHHT-TCSEEEEEECTTHHHHHHHSCCTTSEEEECC----CCH
T ss_pred CceEEEEECCCCcccCCCCeEcCeeCCccHHHHHHHHHHhc-CCCcEEEEeCCCHHHHHHHhccCCCEEEECCCcccCHH
Confidence 6688999999999999 589999999999999999999987 48999999975 4555555556788776543334556
Q ss_pred HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHH
Q 023786 125 ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKA 162 (277)
Q Consensus 125 ~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~ 162 (277)
.++..|++.+..+.+.+++++||+||+++++++++++.
T Consensus 83 ~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 83 ASLRVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp HHHHHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 77889998773235789999999999999999999987
No 32
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.80 E-value=6.9e-19 Score=165.68 Aligned_cols=216 Identities=15% Similarity=0.147 Sum_probs=137.2
Q ss_pred CCCCCCC-ceEEEEecCCCCcccc------cccccccccc-chHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHH-cC
Q 023786 42 RSKNFRS-RVVGIIPARFASSRFE------GKPLVNILGK-PMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQ-FG 110 (277)
Q Consensus 42 ~~~~~~m-~i~aIIlAaG~ssRl~------~K~l~~i~Gk-pLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~-~g 110 (277)
++..+|| ++.|||||||.||||+ ||+|++++|+ |||+|+++++.++ ++++|+|++++ +.+.+++.. ++
T Consensus 4 ~~~~~mm~~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~-gi~~i~vv~~~~~~~i~~~~~~~~~ 82 (420)
T 3brk_X 4 KRVQPLARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNS-GIRRIGVATQYKAHSLIRHLQRGWD 82 (420)
T ss_dssp ---CCGGGGEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHT-TCCEEEEEECTTCHHHHHHHHHHSC
T ss_pred ccchhhhhceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhC-CCCeEEEEeCCChHHHHHHHhhhhc
Confidence 3445555 5889999999999997 7999999999 9999999999988 59999999985 677777654 44
Q ss_pred C---------eEEecCCc--CC---CcH-HHHHHHHHHccc-CCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEE
Q 023786 111 A---------DVIMTSES--CR---NGT-ERCNEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTA 174 (277)
Q Consensus 111 ~---------~vi~~~~~--~~---~g~-~~i~~al~~~~~-~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~ 174 (277)
. .++...+. .+ .|+ .++..|++.+.. +.+.+++++||+ +. ..+++++++.+.+. ++.+++.
T Consensus 83 ~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~-~~-~~~l~~l~~~~~~~-~~~~tl~ 159 (420)
T 3brk_X 83 FFRPERNESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDH-IY-KMDYEYMLQQHVDS-GADVTIG 159 (420)
T ss_dssp CCCGGGTCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSC-EE-CBCTHHHHHHHHHT-TCSEEEE
T ss_pred cccccccCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccE-EE-chHHHHHHHHHHHc-CCeEEEE
Confidence 2 23221111 11 455 568888877642 347899999999 54 45789999888653 2333443
Q ss_pred eeecCCCCCCCCCceEE-EECCCceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhh-ccCCCCC---C-Ccc
Q 023786 175 VTSLKPEDAFDPNRVKC-VVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKI-YPGLHPT---P-LQL 248 (277)
Q Consensus 175 ~~~~~~~~~~d~~~~~v-~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~-~~~~~~s---~-~~~ 248 (277)
+.+.. ..++..+++ ..+++|++..|.+++...... .....+.+.++|+|+|++++|.. +...... . ...
T Consensus 160 ~~~~~---~~~~~~~g~v~~d~~g~v~~~~ekp~~~~~~--~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~ 234 (420)
T 3brk_X 160 CLEVP---RMEATGFGVMHVNEKDEIIDFIEKPADPPGI--PGNEGFALASMGIYVFHTKFLMEAVRRDAADPTSSRDFG 234 (420)
T ss_dssp EEEEE---TTGGGGSEEEEECTTSBEEEEEESCSSCCCB--TTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC--------
T ss_pred EeecC---ccccCcccEEEECCCCcEEEeEeCCCccccc--cccccceEEeeeeEEEeHHHHHHHHHHhcccCCccccch
Confidence 33321 123444443 457789999998876321110 00112578999999999998754 4332221 1 111
Q ss_pred ccChHHHHHHHcCCeeEEEEe
Q 023786 249 EEDLEQLKVLENGYKMKVQQT 269 (277)
Q Consensus 249 ~d~l~~l~~le~g~~v~~~~~ 269 (277)
.|.++. +++.| ++..+..
T Consensus 235 ~d~l~~--li~~g-~v~~~~~ 252 (420)
T 3brk_X 235 KDIIPY--IVEHG-KAVAHRF 252 (420)
T ss_dssp --CTTH--HHHHS-CEEEEEH
T ss_pred HHHHHH--HhhhC-cEEEEEe
Confidence 244443 35666 6776665
No 33
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.80 E-value=3.1e-18 Score=147.85 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=84.8
Q ss_pred CceEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHHcCC-eEEecCCcCC
Q 023786 48 SRVVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQFGA-DVIMTSESCR 121 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~~g~-~vi~~~~~~~ 121 (277)
|++.+||||||.||||+ +|+|++++|+|||+|+++++.+++.+++|+|++++ +.+.+ +..++. .+...+ ...
T Consensus 5 ~~~~aiIlA~G~g~R~~~~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~~~i~~~~-~~~ 82 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAFPQVRVWKN-GGQ 82 (231)
T ss_dssp CCEEEEEECC----------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHCTTSEEECC-CCS
T ss_pred CceEEEEEcccccccCCCCCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcCCCceEEEc-CCC
Confidence 56789999999999997 79999999999999999999987669999999963 45655 444432 232222 222
Q ss_pred CcHHHHHHHHHHccc-----CCCEEEEEcCCcccCCHHHHHHHHHHHHcC
Q 023786 122 NGTERCNEALQKLEK-----KYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166 (277)
Q Consensus 122 ~g~~~i~~al~~~~~-----~~d~vlv~~gD~P~i~~~~i~~li~~~~~~ 166 (277)
+...++..|++.+.. +.+.+++++||+||+++++++++++.+.+.
T Consensus 83 ~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~ 132 (231)
T 1vgw_A 83 TRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA 132 (231)
T ss_dssp SHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 334568888877632 368999999999999999999999988654
No 34
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.79 E-value=1.4e-19 Score=159.75 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=114.8
Q ss_pred CceEEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecC--chHHHHHHHHcCCeEEecCCc
Q 023786 48 SRVVGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATD--DEKIAECCQQFGADVIMTSES 119 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~--~~~i~~~~~~~g~~vi~~~~~ 119 (277)
|++.+||||||.||||+ ||+|++++|+|||+|+++++.++ ++++|+|+++ .+.+.++.+.+++.++..++.
T Consensus 24 ~~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gkpli~~~l~~l~~~-g~~~i~vv~~~~~~~i~~~~~~~~~~iv~~~~~ 102 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEK-GINDIIIIVGYLKEQFDYLKEKYGVRLVFNDKY 102 (254)
T ss_dssp CCCEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHT-TCCCEEEEECTTGGGGTHHHHHHCCEEEECTTT
T ss_pred cCceEEEECCCCcccCCcccCCCCCEEeeECCEEHHHHHHHHHHHC-CCCeEEEEeCCcHHHHHHHHHhCCcEEEECCCc
Confidence 46789999999999997 89999999999999999999988 5999999997 356666666678888776544
Q ss_pred CCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCC-CceEEEECCCc
Q 023786 120 CRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDP-NRVKCVVDNHG 197 (277)
Q Consensus 120 ~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~-~~~~v~~~~~g 197 (277)
...|+ .++..|++.++ + +++++||+|+.. +.++.++ +. ++.+++. . .+| ..++++.+.+|
T Consensus 103 ~~~g~~~al~~a~~~~~---~-~lv~~~D~~~~~-~~~~~~~----~~-~~~~t~~---~-----~~~~~~~~v~~d~~g 164 (254)
T 1jyk_A 103 ADYNNFYSLYLVKEELA---N-SYVIDADNYLFK-NMFRNDL----TR-STYFSVY---R-----EDCTNEWFLVYGDDY 164 (254)
T ss_dssp TTSCTHHHHHTTGGGCT---T-EEEEETTEEESS-CCCCSCC----CS-EEEEECE---E-----SSCSSCCEEEECTTC
T ss_pred cCCCcHHHHHHHHHHCC---C-EEEEeCCcccCH-HHHHHHH----hC-CceEEEE---c-----ccCCCCeEEEECCCC
Confidence 34454 56776766652 3 789999999987 5544332 22 3334432 1 233 24566678889
Q ss_pred eEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHH
Q 023786 198 YAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFL 235 (277)
Q Consensus 198 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l 235 (277)
++..|.+++ ...+.++|+|+|+++.+
T Consensus 165 ~v~~~~e~~------------~~~~~~~Giy~~~~~~~ 190 (254)
T 1jyk_A 165 KVQDIIVDS------------KAGRILSGVSFWDAPTA 190 (254)
T ss_dssp BEEEEECCC------------SSEEBCCSEEEECHHHH
T ss_pred eEEEEEECC------------CCCcEEEEEEEEcHHHH
Confidence 999987642 13588999999988644
No 35
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.79 E-value=1.3e-18 Score=162.27 Aligned_cols=193 Identities=17% Similarity=0.181 Sum_probs=128.5
Q ss_pred EEEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHc--CCeEEecCCcCCC
Q 023786 51 VGIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF--GADVIMTSESCRN 122 (277)
Q Consensus 51 ~aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~--g~~vi~~~~~~~~ 122 (277)
.|||||||.|+||+ +|+|++++|+|||+|+++++.++ ++++|+|+++++ +.+++... ++.++..++. +.
T Consensus 2 ~aiIlA~G~g~R~~plt~~~~K~ll~i~g~pli~~~l~~l~~~-~~~~i~vv~~~~-i~~~~~~~~~~i~~~~~~~~-~~ 78 (401)
T 2ggo_A 2 KAFILAAGSGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKC-GIRDITVIVSSK-NKEYFEKKLKEISIVTQKDD-IK 78 (401)
T ss_dssp EEEEECCCCCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECGG-GHHHHHHHCTTCEEEECCTT-CC
T ss_pred eEEEEcCcCccccCcccCCCCcceeeECCEeHHHHHHHHHHHC-CCCEEEEEeCHH-HHHHhhccCCcEEEEeCCCC-CC
Confidence 49999999999995 79999999999999999999988 599999999977 66666554 4666654321 23
Q ss_pred cHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCce-EEEECCCceEEe
Q 023786 123 GTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRV-KCVVDNHGYAIY 201 (277)
Q Consensus 123 g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~-~v~~~~~g~~~~ 201 (277)
|+. .++..... .+.++++.||+||.++++++++++ ..+..+. ..+. .++..+ .+..+.+|++..
T Consensus 79 g~~---~~l~~~~~-~~~~lv~~~D~~~~~~~~~~~l~~----~~~~~i~--~~~~-----~~~~~~~~v~~~~~g~v~~ 143 (401)
T 2ggo_A 79 GTG---AAILSAKF-NDEALIIYGDLFFSNEKEICNIIT----LKENAII--GVKV-----SNPKDYGVLVLDNQNNLSK 143 (401)
T ss_dssp BST---TTGGGCCC-SSEEEEEETTEEESCSHHHHHHTT----CSSEEEE--EEEC-----SCCSSSCEEEECTTSSEEE
T ss_pred ChH---HHHHHhcc-CCCEEEEeCccccccHHHHHHHHH----hcCCEEE--EEEc-----CCCcceeEEEECCCCeEEE
Confidence 331 23333321 478999999999998889988876 2233333 3333 233333 344577789988
Q ss_pred eecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccCCCCCCCccccChHHHHHHHcCCeeEEEEee
Q 023786 202 FSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVQQTY 270 (277)
Q Consensus 202 f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~~~~s~~~~~d~l~~l~~le~g~~v~~~~~~ 270 (277)
|.+++. +..+.+.++|+|+|+++.++.+.........+.+..+.++.++.|.++..+..+
T Consensus 144 ~~ek~~---------~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~ 203 (401)
T 2ggo_A 144 IIEKPE---------IPPSNLINAGIYKLNSDIFTYLDKISISERGELELTDAINLMAKDHRVKVIEYE 203 (401)
T ss_dssp EECSCS---------SCSCSEEEEEEEEEETHHHHHHHHSCCCSSSCBCHHHHHHHHHHHSCEEEEECC
T ss_pred EEECCC---------CCCCcEEEEEEEEEcHHHHHHhhhcCcCCCCceEHHHHHHHHHCCCcEEEEEec
Confidence 877652 123578999999999999877653322111111112233333456677766644
No 36
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.78 E-value=2e-18 Score=152.55 Aligned_cols=193 Identities=13% Similarity=0.115 Sum_probs=126.1
Q ss_pred EEEecCCCCcccc------ccccccccccchHHHHHHHHhccCCCCeEEEecCch-----HHHHHHHHcCC---eEEecC
Q 023786 52 GIIPARFASSRFE------GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDE-----KIAECCQQFGA---DVIMTS 117 (277)
Q Consensus 52 aIIlAaG~ssRl~------~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~-----~i~~~~~~~g~---~vi~~~ 117 (277)
+||||||.||||. ||+|++++|+|||+|+++++.+..++++|+|++++. .+.+.+.+++. .++..
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 80 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYDTAVFVREKATQLGIKQFYIAEL- 80 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTTHHHHHHHHHHHHTCSSEEEEEE-
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhhhHHHHHHHHHHcCCCCceEEEe-
Confidence 7999999999994 799999999999999999999822689998888642 23333344442 23333
Q ss_pred CcCCCcH-HHHHHHHHHcc----cCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEEE
Q 023786 118 ESCRNGT-ERCNEALQKLE----KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV 192 (277)
Q Consensus 118 ~~~~~g~-~~i~~al~~~~----~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v~ 192 (277)
+..+.|+ .++..|++.+. ...+.+++++||. +++..++..+ ....++.+. +... .+|....+.
T Consensus 81 ~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~-l~~~~~~~~~----~~~~~~~i~--~~~~-----~~p~yG~v~ 148 (255)
T 4evw_A 81 HTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDT-FRPNFVFPDI----SQHSDGYLE--VFQG-----GGDNWSFAK 148 (255)
T ss_dssp SSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTE-ECTTCCCCGG----GGSSSEEEE--EEEC-----CSSCSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCE-EEecchhHHH----hhcCCcEEE--EEec-----CCCceeEEE
Confidence 3344565 46888888872 1346699999999 6644444332 233343333 3333 345333445
Q ss_pred ECCCc--eEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHH-H----hh-ccCC-C---CCCCccccChHHHHHHHc
Q 023786 193 VDNHG--YAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNF-L----KI-YPGL-H---PTPLQLEEDLEQLKVLEN 260 (277)
Q Consensus 193 ~~~~g--~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~-l----~~-~~~~-~---~s~~~~~d~l~~l~~le~ 260 (277)
.+++| +++.|.++. ..+.++++|+|+|++.. + .. +... + ..+++..|.++. +++.
T Consensus 149 ~d~~g~~~V~~i~EK~-----------~~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~~~~~gE~~ltd~i~~--li~~ 215 (255)
T 4evw_A 149 PEHAGSTKVIQTAEKN-----------PISDLCSTGLYHFNRKEDYLEAYREYVARPSQEWERGELYIAPLYNE--LIQK 215 (255)
T ss_dssp ESSTTCCBEEEEESSS-----------CSSSEEEEEEEEESCHHHHHHHHHHHHTSCGGGCSCSCCCSTTHHHH--HHHT
T ss_pred ECCCCCeEEEEEEecc-----------CccCcEEEeEEEECcHHHHHHHHHHHHhcccccccCCeEehHHHHHH--HHHC
Confidence 67788 998887762 13469999999998752 2 12 2222 1 345666565554 3578
Q ss_pred CCeeEEEEee
Q 023786 261 GYKMKVQQTY 270 (277)
Q Consensus 261 g~~v~~~~~~ 270 (277)
|.++..+..+
T Consensus 216 g~~v~~~~~~ 225 (255)
T 4evw_A 216 GLNIHYHLIA 225 (255)
T ss_dssp TCCEEEEECC
T ss_pred CCEEEEEEec
Confidence 8888888753
No 37
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.78 E-value=5.6e-19 Score=150.03 Aligned_cols=109 Identities=20% Similarity=0.208 Sum_probs=87.8
Q ss_pred CceEEEEecCCCCcccc-ccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHHcCCeEEecCCcCCCcH
Q 023786 48 SRVVGIIPARFASSRFE-GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQFGADVIMTSESCRNGT 124 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~-~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~~g~~vi~~~~~~~~g~ 124 (277)
|++.+||||||+||||+ +|+|++++|+|||+|+++++.+. +|+|++++ +.+.+++. .++ ++.++....|+.
T Consensus 1 M~~~~iIlAgG~g~Rmg~~K~l~~i~g~pll~~~l~~l~~~----~ivvv~~~~~~~~~~~~~-~~~-~v~~~~~~~G~~ 74 (197)
T 3d5n_A 1 MNIGVIILAAGEGKRFGGDKLLAKIDNTPIIMRTIRIYGDL----EKIIIVGKYVNEMLPLLM-DQI-VIYNPFWNEGIS 74 (197)
T ss_dssp CCEEEEEECSCCTTCCCSSGGGSBSSSSBHHHHHHHHTTTS----BCCEEECTTHHHHGGGCT-TSC-EEECTTGGGCHH
T ss_pred CceEEEEECCcCcccCCCCeeeCEeCceEHHHHHHHHHHhC----CEEEEECCCHHHHHHHhc-CCE-EEECCCCCCCHH
Confidence 56889999999999997 89999999999999999999764 77777765 34433333 467 665544334666
Q ss_pred HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHH
Q 023786 125 ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163 (277)
Q Consensus 125 ~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~ 163 (277)
.++..|++.+. +.|.+++++||+||++++.++++++.+
T Consensus 75 ~si~~al~~~~-~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 75 TSLKLGLRFFK-DYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp HHHHHHHHHTT-TSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred HHHHHHHHhhc-cCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 78999998884 347899999999999999999999877
No 38
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.77 E-value=1.3e-18 Score=150.76 Aligned_cols=174 Identities=16% Similarity=0.157 Sum_probs=108.6
Q ss_pred cccCCCCCCCceEEEEecCCCCccc-c-ccccccccccchHHHHHHHHhccCCCCeEEEecC-chHHHHH-HHHcC--Ce
Q 023786 39 YLGRSKNFRSRVVGIIPARFASSRF-E-GKPLVNILGKPMIQRTWERSKLATTLDHLVVATD-DEKIAEC-CQQFG--AD 112 (277)
Q Consensus 39 ~~~~~~~~~m~i~aIIlAaG~ssRl-~-~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~-~~~i~~~-~~~~g--~~ 112 (277)
|++..++.|+++.+||||||.|||| + +|++++++|+|||+|+++++.+. +++|+|++. .+++.+. .++++ +.
T Consensus 8 ~~~~~~~~m~~~~~iIlA~G~g~R~~~~~K~l~~i~g~pli~~~l~~l~~~--~~~i~vv~~~~~~~~~~~~~~~~~~~~ 85 (232)
T 2xme_A 8 YLKIFAGRIKLMKAVILAAGLGTRLGGVPKPLVRVGGCEIILRTMKLLSPH--VSEFIIVASRYADDIDAFLKDKGFNYK 85 (232)
T ss_dssp --------CCCEEEEEEECC------CCCGGGCEETTEEHHHHHHHHHGGG--EEEEEEEESTTHHHHHHHHTTSCCCEE
T ss_pred hhhhhhcccccceEEEECCcCcCcCCCCCcEEeEECCEEHHHHHHHHHHHh--CCEEEEEeCChHHHHHHHHHhcCCcEE
Confidence 5666667787899999999999999 4 79999999999999999999876 789999883 3455554 34455 34
Q ss_pred EEecCCcCCCcHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCC-ceEE
Q 023786 113 VIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPN-RVKC 191 (277)
Q Consensus 113 vi~~~~~~~~g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~-~~~v 191 (277)
++..+....|...++..|++.++ +.++++.||+|+ +++.++++++. .+ +.+. .... ..++. ..++
T Consensus 86 ~v~~~~~~~g~~~~i~~a~~~~~---~~~lv~~~D~p~-~~~~~~~l~~~----~~--~~~~-~~~~---~~~~~~~~~v 151 (232)
T 2xme_A 86 IVRHDRPEKGNGYSLLVAKNHVE---DRFILTMGDHVY-SQQFIEKAVRG----EG--VIAD-REPR---FVDIGEATKI 151 (232)
T ss_dssp EEECSCGGGCHHHHHHTTGGGCC---SSEEEEETTEEE-CHHHHHHHTTC----CE--EEEE-SSCS---SSCTTTSCEE
T ss_pred EEECCCCCCCcHHHHHHHHHHCC---CCEEEEcCCccc-CHHHHHHHHhC----CC--cEEE-cccc---ccCCCcceEE
Confidence 44433322344467888887773 457889999998 88888877652 12 1211 1110 11222 2233
Q ss_pred EECCCceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhccC
Q 023786 192 VVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPG 240 (277)
Q Consensus 192 ~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~~ 240 (277)
..+ +|++..|.+++ + .....+.|+|+|+++.+..+..
T Consensus 152 ~~~-~g~v~~~~~~~-~----------~~~~~~~g~~~~~~~~~~~l~~ 188 (232)
T 2xme_A 152 RVE-DGRVAKIGKDL-R----------EFDCVDTGFFVLDDSIFEHAEK 188 (232)
T ss_dssp EEE-TTEEEEEETTC-S----------SCSEEEEEEEEECTTHHHHHGG
T ss_pred EEc-CCEEEEeecCC-C----------CcceEEEEEEEECHHHHHHHHH
Confidence 344 68888887653 1 1357789999999999886653
No 39
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.77 E-value=4.1e-17 Score=141.17 Aligned_cols=113 Identities=18% Similarity=0.226 Sum_probs=86.9
Q ss_pred eEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHH--cCCeEEecCCcCCCc-
Q 023786 50 VVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQ--FGADVIMTSESCRNG- 123 (277)
Q Consensus 50 i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~--~g~~vi~~~~~~~~g- 123 (277)
+.|||||||+||||+ +|+|++++|+|||+|+++++.+++.+++|+|+++++....+... ++..+. ...+|
T Consensus 14 ~~aiILAaG~s~Rm~~~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~~~~~~~~----~~~gg~ 89 (234)
T 1vpa_A 14 NVAILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVFHEKVLG----IVEGGD 89 (234)
T ss_dssp EEEEEEECCCCGGGCCSSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCCCTTEEE----EEECCS
T ss_pred CeEEEEcCcchhhcCCCCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHhccCCceE----EeCCCC
Confidence 469999999999997 89999999999999999999987558999999986543211111 122221 12233
Q ss_pred --HHHHHHHHHHccc-CCCEEEEEcCCcccCCHHHHHHHHHHHHcC
Q 023786 124 --TERCNEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166 (277)
Q Consensus 124 --~~~i~~al~~~~~-~~d~vlv~~gD~P~i~~~~i~~li~~~~~~ 166 (277)
..++..|++.+.. +.|++++++||+||+++++++++++.+.+.
T Consensus 90 ~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~ 135 (234)
T 1vpa_A 90 TRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARET 135 (234)
T ss_dssp SHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 3468888887743 357899999999999999999999987653
No 40
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.77 E-value=2.8e-18 Score=146.28 Aligned_cols=110 Identities=21% Similarity=0.252 Sum_probs=90.7
Q ss_pred CCceEEEEecCCCCcccc--ccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcC-CCc
Q 023786 47 RSRVVGIIPARFASSRFE--GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESC-RNG 123 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~--~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~-~~g 123 (277)
||++.+||||||+|+||+ +|++++++|+|||+|+++++.. .+++|+|+++++. ..+ ..++++++..+... .|.
T Consensus 4 mm~~~~iILAgG~s~Rmg~~~K~ll~i~G~pli~~~l~~l~~--~~~~ivvv~~~~~-~~~-~~~~~~~v~~~~~~~~G~ 79 (201)
T 1e5k_A 4 MTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALMT--QLSHVVVNANRHQ-EIY-QASGLKVIEDSLADYPGP 79 (201)
T ss_dssp CCSEEEEEECCCCCSSSCSSCGGGSEETTEEHHHHHHHHHHH--HCSCEEEECSSSH-HHH-HTTSCCEECCCTTCCCSH
T ss_pred CCcceEEEEcCCCCCcCCCCCCceeeECceeHHHHHHHHHHh--hCCEEEEEcCCcH-HHH-hhcCCeEEecCCCCCCCH
Confidence 678999999999999996 8999999999999999999984 4899999998654 222 34677776553222 344
Q ss_pred HHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHH
Q 023786 124 TERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKA 162 (277)
Q Consensus 124 ~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~ 162 (277)
..++..|++.++ .+++++++||+||+++++++.+++.
T Consensus 80 ~~si~~~l~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 80 LAGMLSVMQQEA--GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp HHHHHHHHHHCC--SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred HHHHHHHHHhCC--CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 567899998883 5899999999999999999999986
No 41
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.76 E-value=9.1e-18 Score=144.21 Aligned_cols=107 Identities=19% Similarity=0.215 Sum_probs=88.2
Q ss_pred EEEEecCCCCcccc-ccccccccccchHHHHHHHHhccCCCCeEEEecCch-HHHHHHHHcCCeEEecCCcCCCcHHHHH
Q 023786 51 VGIIPARFASSRFE-GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDE-KIAECCQQFGADVIMTSESCRNGTERCN 128 (277)
Q Consensus 51 ~aIIlAaG~ssRl~-~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~-~i~~~~~~~g~~vi~~~~~~~~g~~~i~ 128 (277)
.+||||||+||||+ +|++++++|+|||+|+++++.+. +|+|+++++ .+..+...++++++.......|...++.
T Consensus 2 ~aiILAgG~s~Rmg~~K~ll~~~G~pli~~~~~~l~~~----~vvvv~~~~~~~~~~~~~~~~~~v~d~~~~~G~~~si~ 77 (208)
T 3ngw_A 2 KVAVLVGGVGRRIGMEKTEVMLCGKKLIEWVLEKYSPF----QTVFVCRDEKQAEKLSSRYEAEFIWDLHKGVGSIAGIH 77 (208)
T ss_dssp EEEEECCCCCTTTTSCGGGCEETTEEHHHHHHHHHTTS----EEEEECSSHHHHHHHHTTSCSCEECCTTCCCSHHHHHH
T ss_pred EEEEECCCchhhCCCCCcccEECCeeHHHHHHHHhcCC----CEEEEECCHHHHHHHHHhcCCeEEecCCCCCChHHHHH
Confidence 59999999999996 89999999999999999999864 899999854 4444444478888765433335567899
Q ss_pred HHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHc
Q 023786 129 EALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165 (277)
Q Consensus 129 ~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~ 165 (277)
.|++.+ .+++ +++||+||++++.++++++.+.+
T Consensus 78 ~gl~~~---~~~v-v~~~D~P~i~~~~i~~l~~~~~~ 110 (208)
T 3ngw_A 78 AALRHF---GSCV-VAAIDMPFVKPEVLEHLYKEGEK 110 (208)
T ss_dssp HHHHHH---SSEE-EEETTCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHc---CCCE-EEECCccCCCHHHHHHHHHHhhc
Confidence 999887 4788 99999999999999999998864
No 42
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.76 E-value=1.9e-18 Score=150.14 Aligned_cols=116 Identities=10% Similarity=0.180 Sum_probs=91.6
Q ss_pred CCceEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHHcCC-eE-EecCCc
Q 023786 47 RSRVVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQFGA-DV-IMTSES 119 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~~g~-~v-i~~~~~ 119 (277)
||++.+||||||.||||+ +|+|++++|+|||+|+++++.+++.+++|+|++++ +++.+ +..++. .+ +..+
T Consensus 5 ~~~~~~iIlA~G~g~R~~~~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~~~~v~~~~~-- 81 (236)
T 1i52_A 5 HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPLANHPQITVVDG-- 81 (236)
T ss_dssp CCCEEEEEEECCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGGGGCTTEEEEEC--
T ss_pred CCceeEEEECCcCccccCCCCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHhcCCCCEEEECC--
Confidence 678899999999999998 89999999999999999999987558999999974 34444 433432 22 2221
Q ss_pred CCCcHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcC
Q 023786 120 CRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166 (277)
Q Consensus 120 ~~~g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~ 166 (277)
..+...++..|++.+. +.|.+++++||+||+++++++++++.+.+.
T Consensus 82 ~~g~~~~i~~al~~~~-~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 127 (236)
T 1i52_A 82 GDERADSVLAGLKAAG-DAQWVLVHDAARPCLHQDDLARLLALSETS 127 (236)
T ss_dssp CSSHHHHHHHHHHTST-TCSEEEECCTTCTTCCHHHHHHHHGGGGTC
T ss_pred CCCHHHHHHHHHHhcC-CCCEEEEEcCccccCCHHHHHHHHHHHHhc
Confidence 1244567888998874 368999999999999999999999887654
No 43
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.76 E-value=4.2e-18 Score=156.50 Aligned_cols=182 Identities=9% Similarity=0.079 Sum_probs=119.0
Q ss_pred CceEEEEecCCCCcccc-------ccccccccc-cchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcC-CeEEecCC
Q 023786 48 SRVVGIIPARFASSRFE-------GKPLVNILG-KPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFG-ADVIMTSE 118 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~-------~K~l~~i~G-kpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g-~~vi~~~~ 118 (277)
|++.+||||||.||||. ||+|++++| +|||+|+++++....++++|+|+|+++....+.+.++ ..++..
T Consensus 1 M~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~~~~i~e-- 78 (337)
T 2cu2_A 1 MKTYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADGIRLLLE-- 78 (337)
T ss_dssp CCEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSSSEEEEE--
T ss_pred CCeEEEEEcCCCcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhccCceEec--
Confidence 56789999999999992 799999999 9999999999988756899999998754333333332 333332
Q ss_pred cCCCcHHH-HHHHHHHcc--cCCCEEEEEcCCcccCCHHHHHHHHHHHHc--CCCcEEEEEeeecCCCCCCCCCceE-EE
Q 023786 119 SCRNGTER-CNEALQKLE--KKYDIVVNIQGDEPLIEPEIIDGVVKALQA--APDAVFSTAVTSLKPEDAFDPNRVK-CV 192 (277)
Q Consensus 119 ~~~~g~~~-i~~al~~~~--~~~d~vlv~~gD~P~i~~~~i~~li~~~~~--~~~~~v~~~~~~~~~~~~~d~~~~~-v~ 192 (277)
+...|++. +..+.. +. ...+.+++++||+|+.+++.++.+++.+.+ ..++++++...+.. ++..++ +.
T Consensus 79 ~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~vt~~i~p~~-----~~t~yG~I~ 152 (337)
T 2cu2_A 79 PLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEEGFVVALGLRPTR-----PETEYGYIR 152 (337)
T ss_dssp SSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCTTCEEEEEECCSS-----CCSSSCEEE
T ss_pred CCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHcCCeEEEeeccCC-----CCCCceEEE
Confidence 33456653 555544 32 125789999999999999888887765421 12456665544432 222232 33
Q ss_pred ECCC----ceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHH-hhcc
Q 023786 193 VDNH----GYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFL-KIYP 239 (277)
Q Consensus 193 ~~~~----g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l-~~~~ 239 (277)
.+++ +++..|.++|....... ... ..++.|+|+|+|+++.| +.+.
T Consensus 153 ~~~~~~~~~~V~~f~EKp~~~~a~~-~~~-~g~~~n~Giy~f~~~~ll~~l~ 202 (337)
T 2cu2_A 153 LGPREGAWYRGEGFVEKPSYAEALE-YIR-KGYVWNGGVFAFAPATMAELFR 202 (337)
T ss_dssp EEEEETTEEEEEEEECCCCHHHHHH-HHH-TTCEEEEEEEEECHHHHHHHHH
T ss_pred ECCcccccCeEEEEEeCCChHHHHH-Hhh-cCCEEEEEEEEEeHHHHHHHHH
Confidence 3444 68888988763211000 000 11789999999999877 5443
No 44
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.75 E-value=1.7e-17 Score=157.37 Aligned_cols=215 Identities=16% Similarity=0.180 Sum_probs=132.4
Q ss_pred CceEEEEecCCCCcccc------cccccccccc-chHHHHHHHHhccCCCCeEEEecCc--hHHHHHHHH-c--C-----
Q 023786 48 SRVVGIIPARFASSRFE------GKPLVNILGK-PMIQRTWERSKLATTLDHLVVATDD--EKIAECCQQ-F--G----- 110 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~------~K~l~~i~Gk-pLi~~~i~~l~~~~~i~~IvVvt~~--~~i~~~~~~-~--g----- 110 (277)
+++.|||||||.||||+ ||+|++++|+ |||+|+++++.++ ++++|+|++++ +.+.+++.+ + +
T Consensus 19 ~~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~-g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~ 97 (451)
T 1yp2_A 19 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNSASLNRHLSRAYASNMGGYK 97 (451)
T ss_dssp HHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHT-TCCEEEEEESCCCHHHHHHHHHHCC-------
T ss_pred cceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHC-CCCEEEEEeccCHHHHHHHHhhhhhccccccc
Confidence 35789999999999996 7999999999 9999999999987 69999999974 556665543 3 1
Q ss_pred ----CeEEecCC-----cCCCcH-HHHHHHHHHccc-CCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecC
Q 023786 111 ----ADVIMTSE-----SCRNGT-ERCNEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLK 179 (277)
Q Consensus 111 ----~~vi~~~~-----~~~~g~-~~i~~al~~~~~-~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~ 179 (277)
++++...+ ....|+ .+++.++..+.. ..+.+++++||+ +.+ .+++++++.+.+. ++.+++...+..
T Consensus 98 ~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~-~~~-~~l~~l~~~~~~~-~~~~tl~~~~~~ 174 (451)
T 1yp2_A 98 NEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDH-LYR-MDYEKFIQAHRET-DADITVAALPMD 174 (451)
T ss_dssp -CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCE-ECC-CCHHHHHHHHHHT-TCSEEEEEEEEC
T ss_pred ccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcE-EEc-CCHHHHHHHHHHc-CCcEEEEEEEcC
Confidence 22332111 112455 568888877742 257899999999 554 5789999888654 344444333321
Q ss_pred CCCCCCCCceE-EEECCCceEEeeecCCcCCCCC-C------CC-----CCCCCceEEEEEEeecHHHHhhc-cCCCCCC
Q 023786 180 PEDAFDPNRVK-CVVDNHGYAIYFSRGLIPYNKS-G------KV-----NPQFPYLLHLGIQSYDSNFLKIY-PGLHPTP 245 (277)
Q Consensus 180 ~~~~~d~~~~~-v~~~~~g~~~~f~~~~~~~~~~-~------~~-----~~~~~~~~~~Giy~~~~~~l~~~-~~~~~s~ 245 (277)
. .++..++ +..+++|+++.|.+++.+.... . .. .+..+.+.++|+|+|++++|..+ ....+..
T Consensus 175 ~---~~~~~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 251 (451)
T 1yp2_A 175 E---KRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGA 251 (451)
T ss_dssp H---HHHTTSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTTC
T ss_pred h---hhcccCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhcccc
Confidence 0 1333443 4567789999998876421100 0 00 00125689999999999988543 3332221
Q ss_pred Cccc-cChHHHHHHHcCCeeEEEEeee
Q 023786 246 LQLE-EDLEQLKVLENGYKMKVQQTYF 271 (277)
Q Consensus 246 ~~~~-d~l~~l~~le~g~~v~~~~~~~ 271 (277)
.+.. |.++ .+++.|.++.++..+.
T Consensus 252 ~~~~~~~l~--~~i~~g~~v~~~~~~~ 276 (451)
T 1yp2_A 252 NDFGSEVIP--GATSLGMRVQAYLYDG 276 (451)
T ss_dssp CCTTTTHHH--HHHHTTCCEEEEECCS
T ss_pred cchHhhHHH--HHHhcCCceEEEEeCC
Confidence 1111 2232 3467778888877543
No 45
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.74 E-value=1.8e-17 Score=152.22 Aligned_cols=175 Identities=14% Similarity=0.188 Sum_probs=115.0
Q ss_pred EEEEecCCCCcccc-------ccccccccc-cchHHHHHHHHhccCCCCeEEEecCchH---HHHHHHHcC-CeEEecCC
Q 023786 51 VGIIPARFASSRFE-------GKPLVNILG-KPMIQRTWERSKLATTLDHLVVATDDEK---IAECCQQFG-ADVIMTSE 118 (277)
Q Consensus 51 ~aIIlAaG~ssRl~-------~K~l~~i~G-kpLi~~~i~~l~~~~~i~~IvVvt~~~~---i~~~~~~~g-~~vi~~~~ 118 (277)
.+||||||.||||. ||+|++++| +|||+|+++++....++++|+|+|+++. +.+.+...+ ..++..+
T Consensus 3 ~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~~~~ii~e~- 81 (336)
T 2x65_A 3 KALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELPDENIIAEP- 81 (336)
T ss_dssp EEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSCGGGEEEES-
T ss_pred EEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhccccceEEeCC-
Confidence 59999999999994 799999999 9999999999998656899999998642 333333222 2455443
Q ss_pred cCCCcHH-HHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHH----HHcCCCcEEEEEeeecCCCCCCCCCceEE-E
Q 023786 119 SCRNGTE-RCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKA----LQAAPDAVFSTAVTSLKPEDAFDPNRVKC-V 192 (277)
Q Consensus 119 ~~~~g~~-~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~----~~~~~~~~v~~~~~~~~~~~~~d~~~~~v-~ 192 (277)
...|++ .+..|...+. ..+.+++++||+|+.++++++.+++. +.+. ++.+++...+.. +...++. .
T Consensus 82 -~~~gta~ai~~a~~~~~-~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~-~~~vt~~i~p~~-----~~~~yG~I~ 153 (336)
T 2x65_A 82 -MKKNTAPACFIGTKLAD-DDEPVLVLPADHRIPDTKKFWKTVKKALDALEKY-DGLFTFGIVPTR-----PETGYGYIE 153 (336)
T ss_dssp -SCCCHHHHHHHHHTTSC-TTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHH-CSEEEEEECCCS-----CCSSSEEEE
T ss_pred -CCCCcHHHHHHHHHhhC-CCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhc-CCeEEEEeeccc-----CCCCceEEE
Confidence 334554 4665665442 34789999999999998887666654 3332 345555444321 1123333 3
Q ss_pred ECCC-----ceEEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHH
Q 023786 193 VDNH-----GYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFL 235 (277)
Q Consensus 193 ~~~~-----g~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l 235 (277)
.+++ +++..|.++|....... .-....++.|+|+|+|+++.|
T Consensus 154 ~~~~~~~~~~~V~~f~EKp~~~~a~~-~~~~g~y~~n~Giy~~~~~~l 200 (336)
T 2x65_A 154 IGEELEEGVHKVAQFREKPDLETAKK-FVESGRFLWNSGMFLWKAREF 200 (336)
T ss_dssp EEEEEETTEEEEEEEEESCCHHHHHH-HHHHTCEEEEEEEEEEEHHHH
T ss_pred ECCccCCCccEEEEEEECCChHHHHH-HHhcCCeEEEeeeEEEEHHHH
Confidence 3433 67888988763211000 000123689999999999876
No 46
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.74 E-value=9.1e-18 Score=142.92 Aligned_cols=106 Identities=24% Similarity=0.272 Sum_probs=88.0
Q ss_pred CCceEEEEecCCCCcccc-ccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHc-CCeEEecCCcCCCcH
Q 023786 47 RSRVVGIIPARFASSRFE-GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQF-GADVIMTSESCRNGT 124 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~-~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~-g~~vi~~~~~~~~g~ 124 (277)
+|++.+||||||+||||+ +|++++++|+|||+|+++++.+. +++|+|+++++.. +.+ +++++..+....|..
T Consensus 12 ~~~~~~iILA~G~g~Rmg~~K~ll~i~g~pll~~~l~~l~~~--~~~i~vv~~~~~~----~~~~~~~~v~~~~~~~g~~ 85 (201)
T 2e8b_A 12 SKVNTCYVLAGGKSKRFGEDKLLYEIKGKKVIERVYETAKSV--FKEVYIVAKDREK----FSFLNAPVVLDEFEESASI 85 (201)
T ss_dssp CSCCEEEEEEESSCCCCSTTHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEESCSGG----GGGGTCCEEECCCSSCCHH
T ss_pred ccCceEEEECCCCCccCCCCcccceECceEHHHHHHHHHHHh--CCEEEEEeCcHHH----hhcCCceEEecCCCCCCcH
Confidence 456789999999999997 99999999999999999999876 7999999986543 223 777776544444555
Q ss_pred HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHH-HH
Q 023786 125 ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDG-VV 160 (277)
Q Consensus 125 ~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~-li 160 (277)
.++..|++.++ .+.+++++||+||++++.++. ++
T Consensus 86 ~~i~~al~~~~--~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 86 IGLYTALKHAK--EENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp HHHHHHHHHCS--SSEEEEEETTCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcC--CCCEEEEeCCcCcCCHHHHHHHHh
Confidence 67999998874 588999999999999999998 87
No 47
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.73 E-value=4.9e-18 Score=143.26 Aligned_cols=109 Identities=21% Similarity=0.270 Sum_probs=80.3
Q ss_pred EEEEecCCCCcccc--ccccccccccchHHHHHHHHhccCCCCeEEEecC--chHHHHHHHH-c----CCeEEecCCcCC
Q 023786 51 VGIIPARFASSRFE--GKPLVNILGKPMIQRTWERSKLATTLDHLVVATD--DEKIAECCQQ-F----GADVIMTSESCR 121 (277)
Q Consensus 51 ~aIIlAaG~ssRl~--~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~--~~~i~~~~~~-~----g~~vi~~~~~~~ 121 (277)
.|||||||.||||+ +|++++++|+|||+|+++++.+++ +++|+|+++ .+++.+++.. + ++.++.. ...
T Consensus 2 ~aiIlA~G~s~R~~~~~K~l~~~~g~pli~~~l~~l~~~~-~~~v~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~ 78 (196)
T 3rsb_A 2 DALIMAGGKGTRMGGVEKPLIKLCGRCLIDYVVSPLLKSK-VNNIFIATSPNTPKTKEYINSAYKDYKNIVVIDT--SGK 78 (196)
T ss_dssp EEEEEC----CGGGGSCGGGCEETTEEHHHHHHHHHHSSS-CCCEEEECCTTCHHHHHHHHHHTTTTTEEEE--------
T ss_pred EEEEECCCCCCcCCCCCccEEEECCEEHHHHHHHHHHHCC-CCEEEEEeCCChHHHHHHHHhhccCCCCEEEEEC--CCC
Confidence 59999999999997 599999999999999999999985 999999996 4667777655 3 2333322 111
Q ss_pred CcHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHc
Q 023786 122 NGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165 (277)
Q Consensus 122 ~g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~ 165 (277)
+...++..|++.+ .+.+++++||+||+++++++++++.+.+
T Consensus 79 g~~~si~~al~~~---~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 79 GYIEDLNECIGYF---SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp --CCCCCTTTTTC---SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhC---CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 2223466677666 4789999999999999999999999864
No 48
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.72 E-value=2.7e-17 Score=142.96 Aligned_cols=155 Identities=19% Similarity=0.203 Sum_probs=105.2
Q ss_pred CceEEEEecCCC---Ccccc--ccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcCCC
Q 023786 48 SRVVGIIPARFA---SSRFE--GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRN 122 (277)
Q Consensus 48 m~i~aIIlAaG~---ssRl~--~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~ 122 (277)
|++.+||||||. |+||+ +|+|++++|+|||+|+++++.+. ++ +|+|+++.+.+.+++ ++++ ....|
T Consensus 1 m~~~~vIlAaG~tRl~~r~~~~~K~l~~i~g~pll~~~l~~l~~~-~~-~ivvv~~~~~i~~~~---~~~~----~~~~g 71 (232)
T 2dpw_A 1 MRPSAIVLAGGKEAWAERFGVGSKALVPYRGRPMVEWVLEALYAA-GL-SPVYVGENPGLVPAP---ALTL----PDRGG 71 (232)
T ss_dssp CCCEEEEECCCBCSGGGTTTCSBGGGSEETTEETHHHHHHHHHHT-TC-EEEEESCCSSCSSCC---SEEE----CCCSS
T ss_pred CceeEEEECCCCCccccccCCCCceeeEECCEEHHHHHHHHHHhc-CC-EEEEEeChHHHhhhc---CeEe----cCCCC
Confidence 567899999999 88986 79999999999999999999987 45 888887754333222 4443 22234
Q ss_pred cHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEEEECCCceEEee
Q 023786 123 GTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYF 202 (277)
Q Consensus 123 g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v~~~~~g~~~~f 202 (277)
...++..|++.++ +.+++++||+||+++++++++++ +.+ ++.+++.+.+....+...+. ..+.++.|
T Consensus 72 ~~~~i~~a~~~~~---~~~lv~~~D~P~~~~~~i~~l~~-~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~ 138 (232)
T 2dpw_A 72 LLENLEQALEHVE---GRVLVATGDIPHLTEEAVRFVLD-KAP--EAALVYPIVPKEAVEARFPR-------TKRTYARL 138 (232)
T ss_dssp HHHHHHHHHHTCC---SEEEEEETTCTTCCHHHHHHHHH-HCC--SCSEEEEEEEHHHHHHHCTT-------CCCCCEEE
T ss_pred HHHHHHHHHHHcC---CCEEEEeCCcccCCHHHHHHHHh-cCC--CCCEEEEEeeccchhhhCCC-------cceeEEEE
Confidence 4467888988873 78999999999999999999998 533 23344433321000000111 01223333
Q ss_pred ecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhcc
Q 023786 203 SRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYP 239 (277)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~ 239 (277)
.++ ...++|+|+|+++.+..+.
T Consensus 139 ~ek---------------~~~~~g~~~~~~~~l~~~~ 160 (232)
T 2dpw_A 139 REG---------------TFTGGNLLLLDKSLFRKAL 160 (232)
T ss_dssp TTE---------------EEEECSEEEEEHHHHTTTH
T ss_pred ecC---------------ceeeeeEEEEcHHHHHHHH
Confidence 221 2588999999999887653
No 49
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.71 E-value=2.4e-17 Score=143.65 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=83.5
Q ss_pred CceEEEEecCCCCcccc--ccccccccccchHHHHHHHHhccCCCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCcHH
Q 023786 48 SRVVGIIPARFASSRFE--GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTE 125 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~--~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g~~ 125 (277)
|++.|||||||+||||+ +|+|++++|+|||+|++++ . ..+++|+|++++ .+.+ +...++.++. + ..+...
T Consensus 24 M~~~aiILAgG~s~Rm~~~~K~l~~i~gkpli~~~l~~--~-~~~~~ivvv~~~-~~~~-~~~~~v~~~~--~-~~~~~~ 95 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLGRGPKAFLQVGGRTLLEWTLAA--F-RDAAEVLVALPP-GAEP-PKGLGAVFLE--G-GATRQA 95 (236)
T ss_dssp CCCEEEEECCC-------CCGGGCBCSSSBHHHHHHHH--T-TTCSEEEEEECT-TCCC-CTTCSCEEEE--C-CSSHHH
T ss_pred CceEEEEEcCCCCccCCCCCCeEEEECCEEHHHHHHHh--c-CCCCeEEEEeCH-HHHH-hhcCCcEEEe--C-CCchHH
Confidence 78889999999999997 8999999999999999999 3 368999999986 3333 3333454432 1 123456
Q ss_pred HHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEE
Q 023786 126 RCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172 (277)
Q Consensus 126 ~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~ 172 (277)
++..|++.++ .+.+++++||+||+++++++++++.+.+. ++.++
T Consensus 96 ~i~~al~~~~--~~~vlv~~~D~P~~~~~~i~~l~~~~~~~-~~~i~ 139 (236)
T 2px7_A 96 SVARLLEAAS--LPLVLVHDVARPFVSRGLVARVLEAAQRS-GAAVP 139 (236)
T ss_dssp HHHHHHHHCC--SSEEEECCTTCCCCCHHHHHHHHHHHHHH-SEEEE
T ss_pred HHHHHHHHcC--CCeEEEecCccccCCHHHHHHHHHHHHhc-CCeEE
Confidence 7888998874 58899999999999999999999987653 44443
No 50
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.69 E-value=5.1e-17 Score=151.03 Aligned_cols=117 Identities=17% Similarity=0.238 Sum_probs=90.8
Q ss_pred CCceEEEEecCCCCcccc---ccccccccccchHHHHHHHHhccCCCCeEEEecCc-hHHHHHHHHcCCeEEecCCcCCC
Q 023786 47 RSRVVGIIPARFASSRFE---GKPLVNILGKPMIQRTWERSKLATTLDHLVVATDD-EKIAECCQQFGADVIMTSESCRN 122 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~---~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~-~~i~~~~~~~g~~vi~~~~~~~~ 122 (277)
||++.+||||||+||||+ +|++++++|+|||+|+++++.+++.+++|+|++++ +.+.+++. +++++. ...+
T Consensus 1 Mmki~aIILAaG~ssRmg~~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~~~~~i~~~~~--~v~~v~---~g~g 75 (371)
T 1w55_A 1 MSEMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSSNITYMKKFTK--NYEFIE---GGDT 75 (371)
T ss_dssp -CCEEEEEECCSCCTTTCSSSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEESCHHHHHTTCS--SSEEEE---CCSS
T ss_pred CCccEEEEECCCCCccCCCCCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcCCHHHHHHHhC--CCEEEe---CCCC
Confidence 578899999999999997 79999999999999999999986679999999983 22222221 244441 1123
Q ss_pred cHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEE
Q 023786 123 GTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVF 171 (277)
Q Consensus 123 g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v 171 (277)
...++.+|++.++ .|.+++++||+||+++++++++++.+.+. ++.+
T Consensus 76 ~~~sv~~aL~~l~--~d~vlv~~~D~Pli~~~~i~~li~~~~~~-~a~i 121 (371)
T 1w55_A 76 RAESLKKALELID--SEFVMVSDVARVLVSKNLFDRLIENLDKA-DCIT 121 (371)
T ss_dssp HHHHHHHHHTTCC--SSEEEEEETTCTTCCHHHHHHHHTTGGGC-SEEE
T ss_pred hHHHHHHHHHhcC--CCeEEEEeCCcccCCHHHHHHHHHHHHhc-CCEE
Confidence 3467888988773 68999999999999999999999887654 4433
No 51
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.39 E-value=4.4e-12 Score=121.49 Aligned_cols=183 Identities=10% Similarity=0.070 Sum_probs=110.9
Q ss_pred CceEEEEecCCCCcccc---cccccccc-ccchHHHHHHHHhccC---CCC-eEEEecC---chHHHHHHHHc---CCeE
Q 023786 48 SRVVGIIPARFASSRFE---GKPLVNIL-GKPMIQRTWERSKLAT---TLD-HLVVATD---DEKIAECCQQF---GADV 113 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~---~K~l~~i~-GkpLi~~~i~~l~~~~---~i~-~IvVvt~---~~~i~~~~~~~---g~~v 113 (277)
.++.+||||||.||||+ ||.|+++. |+|||+|+++++.+.. ++. .++|++. .+.+.++++++ |.++
T Consensus 91 ~k~avViLAGG~GTRmgs~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~fg~~i 170 (488)
T 2i5k_A 91 SKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRI 170 (488)
T ss_dssp GGEEEEEECCCBSGGGTCCSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCSSSCEE
T ss_pred CCceEEEEcCCCcccCCCCCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhccccCceE
Confidence 46788999999999997 89999998 9999999999987652 222 3555554 36777777653 4454
Q ss_pred EecCC------------------------cCCCcHHHHHHH------HHHc-ccCCCEEEEEcCCcccCCHHHHHHHHHH
Q 023786 114 IMTSE------------------------SCRNGTERCNEA------LQKL-EKKYDIVVNIQGDEPLIEPEIIDGVVKA 162 (277)
Q Consensus 114 i~~~~------------------------~~~~g~~~i~~a------l~~~-~~~~d~vlv~~gD~P~i~~~~i~~li~~ 162 (277)
.+..+ ..+.|++.+..+ ++.+ ....++++|+++|. ++...++. ++..
T Consensus 171 ~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDn-L~~~~d~~-~L~~ 248 (488)
T 2i5k_A 171 RSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDN-LGATVDLK-ILNH 248 (488)
T ss_dssp EEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTB-SSCCCCHH-HHHH
T ss_pred EEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCc-CCCcccHH-HHHH
Confidence 32211 255677654443 3334 22368999999999 88766775 4455
Q ss_pred HHcCCCcEEEEEeeecCCCCCCCCCc-eEEEECCCceE--EeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhcc
Q 023786 163 LQAAPDAVFSTAVTSLKPEDAFDPNR-VKCVVDNHGYA--IYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYP 239 (277)
Q Consensus 163 ~~~~~~~~v~~~~~~~~~~~~~d~~~-~~v~~~~~g~~--~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~ 239 (277)
+.++ ++.+++.+.+. .+|.. ++++...+|+. +.+++.+....... .......+.|+|+|+|+.+.|+...
T Consensus 249 ~~~~-~a~~t~~v~~~-----~~p~~~yG~Iv~~dG~~~iVE~~e~~~e~~~~~-~~~~~~~~~Ntgi~~f~~~~L~~~l 321 (488)
T 2i5k_A 249 MIET-GAEYIMELTDK-----TRADVKGGTLISYDGQVRLLEVAQVPKEHIDEF-KNIRKFTNFNTNNLWINLKAVKRLI 321 (488)
T ss_dssp HHHS-CCSEEEEEEEC-----CGGGSSSCEEEEETTEEEEECGGGSCTTSHHHH-TCTTTCCEEEEEEEEEEHHHHHHHH
T ss_pred HHhc-CCcEEEEEEEe-----cCCCCceeEEEEECCcEEEEEeccCCHHHHhhc-ccccccCEEEEEEEEEeHHHHHHHH
Confidence 5443 34455544442 34533 44433335653 33333221100000 0011234779999999998887653
No 52
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.32 E-value=1.6e-11 Score=116.93 Aligned_cols=182 Identities=9% Similarity=0.013 Sum_probs=110.8
Q ss_pred ceEEEEecCCCCcccc---cccccccc-ccchHHHHHHHHhccC---C--CCeEEEecC--chHHHHHHHH---cCCeEE
Q 023786 49 RVVGIIPARFASSRFE---GKPLVNIL-GKPMIQRTWERSKLAT---T--LDHLVVATD--DEKIAECCQQ---FGADVI 114 (277)
Q Consensus 49 ~i~aIIlAaG~ssRl~---~K~l~~i~-GkpLi~~~i~~l~~~~---~--i~~IvVvt~--~~~i~~~~~~---~g~~vi 114 (277)
++.+||||||.||||+ ||+++++. |+|+|++.++++.+.+ + +..++..+. ++.+.+++++ +|+++.
T Consensus 79 k~~vviLAGGlGTRLg~~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~~fG~~I~ 158 (469)
T 2icy_A 79 KLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIH 158 (469)
T ss_dssp TEEEEEEECCBSGGGTCCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGTTSSSCEE
T ss_pred cceEEEEcCCccccCCCCCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhcccCCceEE
Confidence 5789999999999997 89999998 9999999999988752 2 454455554 4678888754 466664
Q ss_pred ec------------------------CCcCCCcHHHHHHHH------HHc-ccCCCEEEEEcCCcccCCHHHHHHHHHHH
Q 023786 115 MT------------------------SESCRNGTERCNEAL------QKL-EKKYDIVVNIQGDEPLIEPEIIDGVVKAL 163 (277)
Q Consensus 115 ~~------------------------~~~~~~g~~~i~~al------~~~-~~~~d~vlv~~gD~P~i~~~~i~~li~~~ 163 (277)
+- .+..+.|++.+..++ +.+ ....++++++++|. +....+. .++..+
T Consensus 159 ~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~Dn-L~~~~d~-~ll~~~ 236 (469)
T 2icy_A 159 TFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDN-LGAIVDL-TILKHL 236 (469)
T ss_dssp EEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTB-TTCCCCH-HHHHHH
T ss_pred EEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCc-CCcccCH-HHHHHH
Confidence 21 123566776554443 232 22368999999999 4432222 455555
Q ss_pred HcCCCcEEEEEeeecCCCCCCCCC-ceEEEECCCce--EEeeecCCcCCCCCCCCCCCCCceEEEEEEeecHHHHhhcc
Q 023786 164 QAAPDAVFSTAVTSLKPEDAFDPN-RVKCVVDNHGY--AIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYP 239 (277)
Q Consensus 164 ~~~~~~~v~~~~~~~~~~~~~d~~-~~~v~~~~~g~--~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~~ 239 (277)
.++ ++.+++.+++. .+|+ .++++...+|+ ++.|++.+....... .......+.|+|+|.|+.++|+.+.
T Consensus 237 ~~~-~a~~t~~v~~k-----~~~~~~~Gvl~~~dg~~~vvE~~e~p~~~~~e~-k~~~~~~~~N~g~y~~~~~~L~~i~ 308 (469)
T 2icy_A 237 IQN-KNEYCMEVTPK-----TLADVKGGTLISYEGKVQLLEIAQVPDEHVNEF-KSIEKFKIFNTNNLWVNLKAIKKLV 308 (469)
T ss_dssp HHH-TCSEEEEEEEC-----CTTCCSSCEEEEETTEEEEECGGGSCGGGHHHH-HSSSSCCEEEEEEEEEEHHHHHHHH
T ss_pred HHc-CCCeeEEEEEe-----ccCCCceeEEEEECCEEEEEEEeccChhhhhhh-ccccccceeeEEEEEEcHHHHHHHH
Confidence 432 33344444443 2332 34444333555 445555442110000 0001234679999999999998775
No 53
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.28 E-value=5.2e-11 Score=114.50 Aligned_cols=185 Identities=15% Similarity=0.120 Sum_probs=112.3
Q ss_pred CceEEEEecCCCCcccc---ccccccc---cccchHHHHHHHHhc--------cC---CCCeEEEecC--chHHHHHHHH
Q 023786 48 SRVVGIIPARFASSRFE---GKPLVNI---LGKPMIQRTWERSKL--------AT---TLDHLVVATD--DEKIAECCQQ 108 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~---~K~l~~i---~GkpLi~~~i~~l~~--------~~---~i~~IvVvt~--~~~i~~~~~~ 108 (277)
-++.+||||||.||||+ ||+++++ .|+|++++.++++.+ .+ .+..+++.+. ++.+.+++++
T Consensus 101 ~kvavViLAGG~GTRLg~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~~f~~ 180 (505)
T 1jv1_A 101 NKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTK 180 (505)
T ss_dssp TCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHHHHHH
T ss_pred CceEEEEEcCCccccCCCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHHHHHh
Confidence 35789999999999997 8999999 899999999999765 11 2656666555 3677777754
Q ss_pred ---cCC---eEE-ecC--------------------CcCCCcHHHHHHHHH------Hc-ccCCCEEEEEcCCcccCCHH
Q 023786 109 ---FGA---DVI-MTS--------------------ESCRNGTERCNEALQ------KL-EKKYDIVVNIQGDEPLIEPE 154 (277)
Q Consensus 109 ---~g~---~vi-~~~--------------------~~~~~g~~~i~~al~------~~-~~~~d~vlv~~gD~P~i~~~ 154 (277)
+|+ ++. +.. +..+.|++.+..++. .+ ....++++++++|+++....
T Consensus 181 ~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L~~~~ 260 (505)
T 1jv1_A 181 HKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVA 260 (505)
T ss_dssp TGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBTTCCTT
T ss_pred hhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCccccccc
Confidence 454 232 110 224566665554443 22 12358999999999866332
Q ss_pred HHHHHHHHHHcCCCcEEEEEeeecCCCCCCCCCceEEEECCCceE--EeeecCCcCCC--CCCCCCCCCCceEEEEEEee
Q 023786 155 IIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYA--IYFSRGLIPYN--KSGKVNPQFPYLLHLGIQSY 230 (277)
Q Consensus 155 ~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~v~~~~~g~~--~~f~~~~~~~~--~~~~~~~~~~~~~~~Giy~~ 230 (277)
+ ..++..+... ++.+++.+++- +.++..++++...+|+. +.|++.+.... .+.. ........|+|.|.|
T Consensus 261 d-~~~lg~~~~~-~~~~~~~v~~k----~~~~e~~Gvl~~~dg~~~vvEy~E~p~~~~~~~~~~-g~~~~~~~N~~~~~f 333 (505)
T 1jv1_A 261 D-PRFIGFCIQK-GADCGAKVVEK----TNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSD-GRLLFNAGNIANHFF 333 (505)
T ss_dssp C-HHHHHHHHHT-TCSEEEEEEEC----CSTTCSCCEEEEETTEEEEECGGGSCHHHHHCBCTT-SSBSSCEEEEEEEEE
T ss_pred h-HHHHHHHHHc-CCCEEEEEEEc----cCCccCcceEEEECCeEEEEEEeeCCHHHhhhcccc-cccccceeeEEEEEe
Confidence 2 2455555443 34455444431 13455555553335554 44555442110 0000 011235899999999
Q ss_pred cHHHHhhcc
Q 023786 231 DSNFLKIYP 239 (277)
Q Consensus 231 ~~~~l~~~~ 239 (277)
+.++|+.+.
T Consensus 334 ~l~~L~~i~ 342 (505)
T 1jv1_A 334 TVPFLRDVV 342 (505)
T ss_dssp EHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 999887764
No 54
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.06 E-value=2.7e-09 Score=99.52 Aligned_cols=184 Identities=18% Similarity=0.179 Sum_probs=111.0
Q ss_pred ceEEEEecCCCCcccc---ccccccc---cccchHHHHHHHHhc------------cCCCCeEEEecC--chHHHHHHHH
Q 023786 49 RVVGIIPARFASSRFE---GKPLVNI---LGKPMIQRTWERSKL------------ATTLDHLVVATD--DEKIAECCQQ 108 (277)
Q Consensus 49 ~i~aIIlAaG~ssRl~---~K~l~~i---~GkpLi~~~i~~l~~------------~~~i~~IvVvt~--~~~i~~~~~~ 108 (277)
++.+|+||||.||||+ ||.+.++ .|+|++++.++++++ ...+..++..+. ++.+.+++++
T Consensus 35 kvavvlLAGG~GTRLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~~~f~~ 114 (405)
T 3oc9_A 35 KTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEINNYFKE 114 (405)
T ss_dssp CEEEEEECCSBCTTTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHHHHHHH
T ss_pred ceEEEEecCCCcccccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHHHHHHh
Confidence 6789999999999996 8999999 999999999998863 124554444444 4777788764
Q ss_pred ---cCC---eEEe---------------------cCCcCCCcHHHHHHHHHH------c-ccCCCEEEEEcCCcccCCHH
Q 023786 109 ---FGA---DVIM---------------------TSESCRNGTERCNEALQK------L-EKKYDIVVNIQGDEPLIEPE 154 (277)
Q Consensus 109 ---~g~---~vi~---------------------~~~~~~~g~~~i~~al~~------~-~~~~d~vlv~~gD~P~i~~~ 154 (277)
+|. ++.+ ..+..+.|++.+..+|.. + ....+++++.+.|.++....
T Consensus 115 ~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN~L~~~~ 194 (405)
T 3oc9_A 115 HQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNILCKDV 194 (405)
T ss_dssp TGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTBTTCCSS
T ss_pred CcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCCcccccC
Confidence 344 2321 112344566555555432 2 12357999999999887443
Q ss_pred HHHHHHHHHHcCCCcEEEEEeeecCCCCCCCC-CceEEEECCCc--eEEeeecCCcCCCCCCCCCCCCCceEEEEEEeec
Q 023786 155 IIDGVVKALQAAPDAVFSTAVTSLKPEDAFDP-NRVKCVVDNHG--YAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYD 231 (277)
Q Consensus 155 ~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~-~~~~v~~~~~g--~~~~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~ 231 (277)
+ -.++..+.+. ++.+++.+++. .+| ..++++...+| +++.|++.+.+...............|+++++|+
T Consensus 195 D-p~~lg~~~~~-~~d~~~kvv~k-----~~~dek~Gvl~~~dg~~~vvEysei~~e~e~~~~~g~l~fn~~Ni~~h~fs 267 (405)
T 3oc9_A 195 D-PNMIGYMDLL-QSEICIKIVKK-----GFKEEKVGVLVKEQERIKVVEYTELTDELNKQLSNGEFIYNCGHISINGYS 267 (405)
T ss_dssp C-HHHHHHHHHT-TCSEEEEEEEC-----CSTTCSCCEEEEETTEEEEECGGGCCTTTTCBCTTSCBSSCEEEEEEEEEE
T ss_pred C-HHHHHHHHHc-CCCEEEEEEEC-----CCCCCccceEEEECCeeEEEEEeeCCHHHhhcCCCCceeeccceeEeeecC
Confidence 2 2344544433 34455545442 233 34444433345 5666666442200000000112347899999999
Q ss_pred HHHHhhcc
Q 023786 232 SNFLKIYP 239 (277)
Q Consensus 232 ~~~l~~~~ 239 (277)
.++|+...
T Consensus 268 ~~fL~~i~ 275 (405)
T 3oc9_A 268 TSFLEKAA 275 (405)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 99998764
No 55
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=98.89 E-value=3.5e-09 Score=90.22 Aligned_cols=102 Identities=21% Similarity=0.253 Sum_probs=78.0
Q ss_pred eEEEEec--CCCCccccc---cccccccccchHHHHHHHHhccCCCCeE-EEecCchHHHHHHHHcCCeEEecCCcCCCc
Q 023786 50 VVGIIPA--RFASSRFEG---KPLVNILGKPMIQRTWERSKLATTLDHL-VVATDDEKIAECCQQFGADVIMTSESCRNG 123 (277)
Q Consensus 50 i~aIIlA--aG~ssRl~~---K~l~~i~GkpLi~~~i~~l~~~~~i~~I-vVvt~~~~i~~~~~~~g~~vi~~~~~~~~g 123 (277)
+.+|||| +...|||++ +......++||++|+++++.+. +++.+ +|+++++.+.++ .++.++.++ .|.
T Consensus 4 ~~~vip~k~g~~KtRL~~~l~~~~~~~l~~~ll~~vl~~l~~~-~~~~v~vvv~~~~~~~~~---~~~~~v~~~---~gl 76 (211)
T 2i5e_A 4 MRAVIPYKKAGAKSRLSPVLSLQEREEFVELMLNQVISSLKGA-GIEQVDILSPSVYGLEEM---TEARVLLDE---KDL 76 (211)
T ss_dssp CEEEEECCCTTTTGGGTTTSCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEESSCTTCSSC---CSSEEEECC---SCH
T ss_pred eEEEEEeCCCCCccccCccCCHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEEcCcHHHHhh---cCCEEEECC---CCH
Confidence 5699999 667888863 2234466799999999999887 48899 999876543222 577777653 344
Q ss_pred HHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHH
Q 023786 124 TERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVK 161 (277)
Q Consensus 124 ~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~ 161 (277)
.+++.++++.+ .+.++++.||+|++++++++++++
T Consensus 77 ~~sl~~a~~~~---~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 77 NEALNRYLKEA---EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp HHHHHHHHHHC---CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred HHHHHHHHHhc---CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 46788888766 478999999999999999999987
No 56
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=98.88 E-value=3.9e-09 Score=101.21 Aligned_cols=180 Identities=13% Similarity=0.038 Sum_probs=104.9
Q ss_pred ceEEEEecCCCCcccc---cccccccc-ccchHHHHHHHHhccC-----CCCeEEEecC---chHHHHHHH-H---cCC-
Q 023786 49 RVVGIIPARFASSRFE---GKPLVNIL-GKPMIQRTWERSKLAT-----TLDHLVVATD---DEKIAECCQ-Q---FGA- 111 (277)
Q Consensus 49 ~i~aIIlAaG~ssRl~---~K~l~~i~-GkpLi~~~i~~l~~~~-----~i~~IvVvt~---~~~i~~~~~-~---~g~- 111 (277)
++.+||||||.||||+ ||++++++ |+|+|++.++++.+.+ .+ .+++.|. ++.+.++++ + +|+
T Consensus 75 k~avViLAGGlGTRLg~~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~i-p~viMtS~~t~e~t~~~f~~~~~~fGl~ 153 (505)
T 2oeg_A 75 STVVLKLNGGLGTGMGLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHL-RFMLMDSFNTSASTKSFLKARYPWLYQV 153 (505)
T ss_dssp TEEEEEEECCCCGGGTCCSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTC-EEEEEECHHHHHHHHHHHHHHCHHHHTT
T ss_pred cceEEEEcCCcccccCCCCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCc-CEEEEeCCCCHHHHHHHHhhhhhccCCC
Confidence 6789999999999997 89999999 9999999999998652 13 4555554 466777776 3 344
Q ss_pred --eEE-e-----------------c-----CCcCCCcHHHHHHHH------HHc-ccCCCEEEEEcCCcccCCHHHHHHH
Q 023786 112 --DVI-M-----------------T-----SESCRNGTERCNEAL------QKL-EKKYDIVVNIQGDEPLIEPEIIDGV 159 (277)
Q Consensus 112 --~vi-~-----------------~-----~~~~~~g~~~i~~al------~~~-~~~~d~vlv~~gD~P~i~~~~i~~l 159 (277)
++. + . .+..+.|++.+..++ +.+ ....++++++++|.. ....+. .+
T Consensus 154 ~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL-~~~~D~-~l 231 (505)
T 2oeg_A 154 FDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNL-GATIDK-RV 231 (505)
T ss_dssp CCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCT-TCCCCH-HH
T ss_pred ccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCcc-ccccCH-HH
Confidence 221 1 0 122344665554433 332 223689999999994 322233 55
Q ss_pred HHHHHcCCCcEEEEEeeecCCCCCCCC-CceEEEEC-------CCce---------EEeeecCCcCCCCCCCCCCCCCce
Q 023786 160 VKALQAAPDAVFSTAVTSLKPEDAFDP-NRVKCVVD-------NHGY---------AIYFSRGLIPYNKSGKVNPQFPYL 222 (277)
Q Consensus 160 i~~~~~~~~~~v~~~~~~~~~~~~~d~-~~~~v~~~-------~~g~---------~~~f~~~~~~~~~~~~~~~~~~~~ 222 (277)
+..+.++ ++.+++.+++. .++ ..++++.. .+|+ ++.+++-+.+...+.. ....-.+
T Consensus 232 lg~~~~~-~ad~~~~v~~k-----~~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~~-g~~~f~~ 304 (505)
T 2oeg_A 232 LAYMEKE-KIDFLMEVCRR-----TESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESFQ-DINKYSF 304 (505)
T ss_dssp HHHHHHH-TCSEEEEEEEC-----CTTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHHH-CTTTTCE
T ss_pred HHHHHhc-CCcEEEEEEEe-----cCCccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhccc-CccccCe
Confidence 5555432 33445444443 233 23455444 5677 3333332211000000 0112245
Q ss_pred EEEEEEeecHHHHhhc
Q 023786 223 LHLGIQSYDSNFLKIY 238 (277)
Q Consensus 223 ~~~Giy~~~~~~l~~~ 238 (277)
.|+....|+-++++..
T Consensus 305 ~Ninn~~~~l~~l~~~ 320 (505)
T 2oeg_A 305 FNTNNLWIRLPVLLET 320 (505)
T ss_dssp EEEEEEEEEHHHHHHH
T ss_pred eEEEEEEEEHHHHHHH
Confidence 8999999998888754
No 57
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=98.87 E-value=4.2e-09 Score=100.85 Aligned_cols=182 Identities=18% Similarity=0.122 Sum_probs=106.8
Q ss_pred ceEEEEecCCCCcccc---cccccccc---ccchHHHHHHHHhccC-------C------CCeEEEecC--chHHHHHHH
Q 023786 49 RVVGIIPARFASSRFE---GKPLVNIL---GKPMIQRTWERSKLAT-------T------LDHLVVATD--DEKIAECCQ 107 (277)
Q Consensus 49 ~i~aIIlAaG~ssRl~---~K~l~~i~---GkpLi~~~i~~l~~~~-------~------i~~IvVvt~--~~~i~~~~~ 107 (277)
++.+||||||.||||+ ||++++++ |+|++++.++++.+.. + +..++..++ ++.+.++++
T Consensus 103 kvavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t~~~~~ 182 (486)
T 2yqc_A 103 EVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATESFFI 182 (486)
T ss_dssp CEEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHHHHHHH
T ss_pred CeEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHHHHHHh
Confidence 5779999999999997 89999999 9999999999988651 2 555555554 356777775
Q ss_pred H---cCC---eEE--e-------cC-------------CcCCCcHHHHHHHHH------Hc-ccCCCEEEEEcCCcccCC
Q 023786 108 Q---FGA---DVI--M-------TS-------------ESCRNGTERCNEALQ------KL-EKKYDIVVNIQGDEPLIE 152 (277)
Q Consensus 108 ~---~g~---~vi--~-------~~-------------~~~~~g~~~i~~al~------~~-~~~~d~vlv~~gD~P~i~ 152 (277)
+ +|. .+. . .. ...+.|++.+..++. .+ ....+++.+.+.|.++..
T Consensus 183 ~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vDN~l~~ 262 (486)
T 2yqc_A 183 ENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCLVK 262 (486)
T ss_dssp HTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETTBTTCC
T ss_pred hccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCCCceee
Confidence 4 343 121 0 00 113456655555543 22 224688999999998873
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeeecCCCCCCCC-CceEEEECC--Cce--EEeeecCCcCCCC--CCC-CCCCCCceEE
Q 023786 153 PEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDP-NRVKCVVDN--HGY--AIYFSRGLIPYNK--SGK-VNPQFPYLLH 224 (277)
Q Consensus 153 ~~~i~~li~~~~~~~~~~v~~~~~~~~~~~~~d~-~~~~v~~~~--~g~--~~~f~~~~~~~~~--~~~-~~~~~~~~~~ 224 (277)
..+. .++..+... ++.+++.+++. .++ ..++++... +|+ ++.|++.+..... +.. .........|
T Consensus 263 ~~Dp-~~lg~~~~~-~~~~~~~vv~k-----~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~~~~~~~~~~~~~~N 335 (486)
T 2yqc_A 263 VADP-IFIGFAIAK-KFDLATKVVRK-----RDANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAAN 335 (486)
T ss_dssp TTCH-HHHHHHHHH-TCSEEEEEEEC-----CSTTCCCCEEEEETTTTEEEEECGGGSCHHHHHCEETTEEEEESSCEEE
T ss_pred ccCH-HHHHHHHHc-CCCEEEEEEEc-----CCCCCceeEEEEEecCCCEEEEEEecCCHHHhhccccccccccccccee
Confidence 3222 244444332 33345444432 122 334444322 564 5666665421100 000 0000235789
Q ss_pred EEEEeecHHHHhh
Q 023786 225 LGIQSYDSNFLKI 237 (277)
Q Consensus 225 ~Giy~~~~~~l~~ 237 (277)
+|.|.|+.++|+.
T Consensus 336 i~~~~~~l~~L~~ 348 (486)
T 2yqc_A 336 IVNHYYSVEFLNK 348 (486)
T ss_dssp EEEEEEEHHHHHH
T ss_pred EEEEEEeHHHHHH
Confidence 9999999999887
No 58
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=97.82 E-value=6e-05 Score=65.60 Aligned_cols=113 Identities=16% Similarity=0.140 Sum_probs=73.4
Q ss_pred CceEEEEecC----C-CCccccc----cccccccccchHHHHHHHHhccCCCCeEEEecCch--HH---HHHHHHcCCeE
Q 023786 48 SRVVGIIPAR----F-ASSRFEG----KPLVNILGKPMIQRTWERSKLATTLDHLVVATDDE--KI---AECCQQFGADV 113 (277)
Q Consensus 48 m~i~aIIlAa----G-~ssRl~~----K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~--~i---~~~~~~~g~~v 113 (277)
++...||++. | .-|||.+ ..-..+. ++|++++++.+.+. ..+.++++++++ .+ ..+. ..++
T Consensus 3 ~~~~liv~~K~P~~g~~KTRL~~~l~~~~aa~l~-~~ll~~tl~~~~~~-~~~~vvvvt~~~~~~~~~~~~~~-~~~~-- 77 (242)
T 3cgx_A 3 SESCILFFVKYPEPGKVKTRLGEVVGNDKAAMLY-RHFVQDMLQGLARL-HADLHICYVPGDADLPEKFKAWL-GPQH-- 77 (242)
T ss_dssp CSEEEEEEECCCCTTTSCHHHHHHHCHHHHHHHH-HHHHHHHHHHHTTS-SSEEEEEECCCCTTHHHHHHHHH-CTTS--
T ss_pred CCCEEEEEeCCCCCCCcccccCccCCHHHHHHHH-HHHHHHHHHHHHhC-CCCEEEEEcCCchhhhhhhhhhc-cCCc--
Confidence 3455677664 3 4578742 2222222 58999999999887 466777777642 22 2222 1233
Q ss_pred EecCCcCCCcHHHHHHHHHHc-ccCCCEEEEEcCCcccCCHHHHHHHHHHHHc
Q 023786 114 IMTSESCRNGTERCNEALQKL-EKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165 (277)
Q Consensus 114 i~~~~~~~~g~~~i~~al~~~-~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~ 165 (277)
...++...+-..++.+|++.+ ....+.++++.+|+|++++++|+++++.+.+
T Consensus 78 ~~~~q~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 78 MFAAQQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred EEecCCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 333343334446788888765 3346789999999999999999999987755
No 59
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=97.53 E-value=0.0011 Score=63.53 Aligned_cols=185 Identities=10% Similarity=0.004 Sum_probs=103.1
Q ss_pred CCceEEEEecCCCCcccc---cccccccc-ccchHHHHHHHHhcc----CCCCeEEEecC---chHHHHHHHHc---CCe
Q 023786 47 RSRVVGIIPARFASSRFE---GKPLVNIL-GKPMIQRTWERSKLA----TTLDHLVVATD---DEKIAECCQQF---GAD 112 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~---~K~l~~i~-GkpLi~~~i~~l~~~----~~i~~IvVvt~---~~~i~~~~~~~---g~~ 112 (277)
.-++.+|+||||.||||+ ||.++++. |+++++..++++++. +..-..++.|. ++.+.++++++ |.+
T Consensus 125 l~kvavvlLaGGlGTRLG~~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~fg~~ 204 (528)
T 3r3i_A 125 LNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVK 204 (528)
T ss_dssp CTTEEEEEECCCBCTTTTCSSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTTSSCC
T ss_pred cCceEEEEeCCCCccccCCCCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCccCCC
Confidence 357889999999999997 89999995 999999999998754 21224556554 35566666543 333
Q ss_pred EE-ecC--------------------------CcCCCcHHHHHHHHHH------c-ccCCCEEEEEcCCcccCCHHHHHH
Q 023786 113 VI-MTS--------------------------ESCRNGTERCNEALQK------L-EKKYDIVVNIQGDEPLIEPEIIDG 158 (277)
Q Consensus 113 vi-~~~--------------------------~~~~~g~~~i~~al~~------~-~~~~d~vlv~~gD~P~i~~~~i~~ 158 (277)
+. +.. ...+.|.+.++.+|.. + ....+++.+.+.|.++... +. .
T Consensus 205 V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~v-Dp-~ 282 (528)
T 3r3i_A 205 IYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATV-DL-Y 282 (528)
T ss_dssp EEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCC-CH-H
T ss_pred eEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCccccc-CH-H
Confidence 31 110 1133444445555432 2 2346899999999987754 22 2
Q ss_pred HHHHHHcC---CCcEEEEEeeecCCCCCCCC-CceEEEECCCceEE--eeecCCcCCCCCCCCCCCCCceEEEEEEeecH
Q 023786 159 VVKALQAA---PDAVFSTAVTSLKPEDAFDP-NRVKCVVDNHGYAI--YFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDS 232 (277)
Q Consensus 159 li~~~~~~---~~~~v~~~~~~~~~~~~~d~-~~~~v~~~~~g~~~--~f~~~~~~~~~~~~~~~~~~~~~~~Giy~~~~ 232 (277)
++..+... .++.+++-+++- .++ ..++++...+|+.. .+++-+.+...+. .....-.+.|+....|+-
T Consensus 283 ~Lg~~~~~~~~~~~d~~~kVv~K-----t~~dek~Gvl~~~dGk~~vvEyseip~e~~~~~-~g~~~f~~~Ntnnlw~~L 356 (528)
T 3r3i_A 283 ILNHLMNPPNGKRCEFVMEVTNK-----TRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEF-KSVSKFKIFNTNNLWISL 356 (528)
T ss_dssp HHHHHSSCSSSCCCSEEEEECCC-----CTTCCSSCEEECSSSSCEEECTTSSCGGGTTTS-SCSSSCCCCEEEEEEEEH
T ss_pred HHHHHHhcccccCCcEEEEEeEc-----cccCCcccEEEEECCeEEEEEecCCChhHhhcc-CCcccCCeEEEEEEEEEH
Confidence 33444331 133344333321 122 22445545566543 3333211111110 001122358888999999
Q ss_pred HHHhhcc
Q 023786 233 NFLKIYP 239 (277)
Q Consensus 233 ~~l~~~~ 239 (277)
+.|+...
T Consensus 357 ~~L~~v~ 363 (528)
T 3r3i_A 357 AAVKRLQ 363 (528)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887654
No 60
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=96.71 E-value=0.046 Score=51.87 Aligned_cols=60 Identities=8% Similarity=0.034 Sum_probs=45.8
Q ss_pred ceEEEEecCCCCcccc---ccccccc-cccchHHHHHHHHhcc----CCCCeEEEecC---chHHHHHHHH
Q 023786 49 RVVGIIPARFASSRFE---GKPLVNI-LGKPMIQRTWERSKLA----TTLDHLVVATD---DEKIAECCQQ 108 (277)
Q Consensus 49 ~i~aIIlAaG~ssRl~---~K~l~~i-~GkpLi~~~i~~l~~~----~~i~~IvVvt~---~~~i~~~~~~ 108 (277)
++.+|+||||.||||+ +|.++++ .|+++++..+++++.. +..-..++.|+ ++.+.+++++
T Consensus 76 kvavvlLaGGlGTRLG~~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k 146 (484)
T 3gue_A 76 QAVVLKLNGGLGTGMGLNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRK 146 (484)
T ss_dssp TEEEEEEECCCCGGGTCSSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGG
T ss_pred hcEEEEEcCCcccccCCCCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHh
Confidence 6889999999999997 7999999 8999999999988743 11224566665 3666666654
No 61
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=96.41 E-value=0.0032 Score=61.39 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=49.5
Q ss_pred ceEEEEecCCCCcccc---cccccccc---ccchHHHHHHHHhccCCC-CeEEEecC---chHHHHHHHHcCC
Q 023786 49 RVVGIIPARFASSRFE---GKPLVNIL---GKPMIQRTWERSKLATTL-DHLVVATD---DEKIAECCQQFGA 111 (277)
Q Consensus 49 ~i~aIIlAaG~ssRl~---~K~l~~i~---GkpLi~~~i~~l~~~~~i-~~IvVvt~---~~~i~~~~~~~g~ 111 (277)
++.+|+||||.||||+ +|.++++. |++++++.++++++..+. -..+|.|. ++.+.++++++|.
T Consensus 114 kvavvllaGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~fgl 186 (630)
T 3ogz_A 114 KTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRELQL 186 (630)
T ss_dssp GEEEEEECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHHTTC
T ss_pred hceEEEecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHHhCC
Confidence 6789999999999997 89999996 999999999998854222 24566664 4677788877764
No 62
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=96.08 E-value=0.16 Score=47.44 Aligned_cols=107 Identities=7% Similarity=0.034 Sum_probs=67.2
Q ss_pred CCCceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCC---CeEEEecC--ch-H----HHHHHHHcC--CeE
Q 023786 46 FRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTL---DHLVVATD--DE-K----IAECCQQFG--ADV 113 (277)
Q Consensus 46 ~~m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i---~~IvVvt~--~~-~----i~~~~~~~g--~~v 113 (277)
.+|++.+||++-... ...|..+++.+.+...- .+||||-+ .+ . +.++.++++ +++
T Consensus 27 ~~p~vSVIIp~yN~~-------------~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~v 93 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEA-------------WSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHV 93 (472)
T ss_dssp CCCCEEEEEEESSCC-------------HHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEE
T ss_pred CCCCeEEEEEeCCCC-------------HHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEE
Confidence 356677888775332 04677778877654221 27777764 12 2 333334443 555
Q ss_pred EecCCcCCCcHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCc
Q 023786 114 IMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169 (277)
Q Consensus 114 i~~~~~~~~g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~ 169 (277)
+..++. .|-......|++.. ..|+++++|+|. .++++.++.+++.+.++++.
T Consensus 94 i~~~~n-~G~~~a~N~g~~~A--~gd~i~flD~D~-~~~p~~L~~ll~~~~~~~~~ 145 (472)
T 1xhb_A 94 IRMEQR-SGLIRARLKGAAVS--RGQVITFLDAHC-ECTAGWLEPLLARIKHDRRT 145 (472)
T ss_dssp EECSSC-CCHHHHHHHHHHHC--CSSEEEEEESSE-EECTTCHHHHHHHHHHCTTE
T ss_pred EECCCC-CChHHHHHHHHHhc--cCCeEEEECCCe-EeCccHHHHHHHHHHhCCCE
Confidence 554322 23334456677777 468999999998 67899999999998775443
No 63
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=96.01 E-value=0.097 Score=44.07 Aligned_cols=94 Identities=15% Similarity=0.219 Sum_probs=60.1
Q ss_pred ccchHHHHHHHHhccCCCC-eEEEecC--chHHHHHHHHc----CCeEEecCCc------CCCcHH-HHHHHHHHcccCC
Q 023786 73 GKPMIQRTWERSKLATTLD-HLVVATD--DEKIAECCQQF----GADVIMTSES------CRNGTE-RCNEALQKLEKKY 138 (277)
Q Consensus 73 GkpLi~~~i~~l~~~~~i~-~IvVvt~--~~~i~~~~~~~----g~~vi~~~~~------~~~g~~-~i~~al~~~~~~~ 138 (277)
....|..+++.+.+...-+ +|+|+-+ .+...++++++ +++++..+.. ...|.. ....|++.. +.
T Consensus 12 ~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a--~g 89 (255)
T 1qg8_A 12 KSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTRYAALINQAIEMA--EG 89 (255)
T ss_dssp CTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHC--CC
T ss_pred CHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhhcCCEEEEecccccccccccccCHHHHHHHHHHHc--CC
Confidence 3467888888887642222 6777654 34455555544 4555544310 123433 455677777 46
Q ss_pred CEEEEEcCCcccCCHHHHHHHHHHHHcCCCc
Q 023786 139 DIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169 (277)
Q Consensus 139 d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~ 169 (277)
|+++++|+|. .+.++.++.+++.+.++++.
T Consensus 90 ~~i~~lD~Dd-~~~~~~l~~~~~~~~~~~~~ 119 (255)
T 1qg8_A 90 EYITYATDDN-IYMPDRLLKMVRELDTHPEK 119 (255)
T ss_dssp SEEEEEETTE-EECTTHHHHHHHHHHHCTTC
T ss_pred CEEEEeCCCC-ccChHHHHHHHHHHHhCCCc
Confidence 9999999999 56788999999998765443
No 64
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=95.81 E-value=0.13 Score=45.93 Aligned_cols=108 Identities=19% Similarity=0.171 Sum_probs=69.4
Q ss_pred CCceEEEEecCCCCccccccccccccccchHHHHHHHHhcc--CCCCeEEEecC--chHHHHHHHHcCCeEEec-----C
Q 023786 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLA--TTLDHLVVATD--DEKIAECCQQFGADVIMT-----S 117 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~--~~i~~IvVvt~--~~~i~~~~~~~g~~vi~~-----~ 117 (277)
++++.+|||+-. ....|..+++.+.+. +...+|+|+-+ .+...+++++++.++... .
T Consensus 47 ~~~vSViIp~yN--------------~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~ 112 (329)
T 3ckj_A 47 GRTISVVLPALD--------------EEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPE 112 (329)
T ss_dssp TCCEEEEEEESS--------------CTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTT
T ss_pred CCcEEEEEeeCC--------------CHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhccceeeecc
Confidence 456777777753 234667777777654 22357887764 345566777777765331 0
Q ss_pred CcCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcE
Q 023786 118 ESCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAV 170 (277)
Q Consensus 118 ~~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~ 170 (277)
.....|. .....|++.. ..|+++++|+|.-.+.++.+..+++.+.+++++.
T Consensus 113 ~~~n~G~~~a~n~g~~~a--~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~ 164 (329)
T 3ckj_A 113 VPIRPGKGEALWRSLAAS--RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVH 164 (329)
T ss_dssp SCCCCSHHHHHHHHHHHC--CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCC
T ss_pred CCCCCCHHHHHHHHHHhC--CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCcc
Confidence 1222344 4466788777 4699999999994368889999999865543433
No 65
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=95.51 E-value=0.12 Score=52.11 Aligned_cols=91 Identities=19% Similarity=0.307 Sum_probs=62.3
Q ss_pred chHHHHHHHHhccCCCC---eEEEecCc--h-------------------HHHHHHHHcCCeEEecCCcCCCcH-HHHHH
Q 023786 75 PMIQRTWERSKLATTLD---HLVVATDD--E-------------------KIAECCQQFGADVIMTSESCRNGT-ERCNE 129 (277)
Q Consensus 75 pLi~~~i~~l~~~~~i~---~IvVvt~~--~-------------------~i~~~~~~~g~~vi~~~~~~~~g~-~~i~~ 129 (277)
.+++.+++.+.+...-+ +|+|+.|. + .+.++++++++.++.+++.. +|. ..+..
T Consensus 154 ~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~~~~~~-~GKa~alN~ 232 (802)
T 4hg6_A 154 DMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRERNE-HAKAGNMSA 232 (802)
T ss_dssp HHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEECSSCC-SHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEEecCCC-CcchHHHHH
Confidence 36688899886542222 68888762 1 23344566788877665432 343 34677
Q ss_pred HHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCc
Q 023786 130 ALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169 (277)
Q Consensus 130 al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~ 169 (277)
|++.. +.|+++++|+|. ..+++.++++++.+.++++.
T Consensus 233 gl~~a--~gd~Il~lDaD~-~~~pd~L~~lv~~~~~dp~v 269 (802)
T 4hg6_A 233 ALERL--KGELVVVFDADH-VPSRDFLARTVGYFVEDPDL 269 (802)
T ss_dssp HHHHC--CCSEEEECCTTE-EECTTHHHHHHHHHHHSSSC
T ss_pred HHHhc--CCCEEEEECCCC-CcChHHHHHHHHHHhcCCCe
Confidence 88877 579999999999 66899999999998654443
No 66
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=95.42 E-value=0.35 Score=45.58 Aligned_cols=105 Identities=7% Similarity=0.063 Sum_probs=65.9
Q ss_pred CCceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCC---eEEEecC---chHHHHHHHHc-CCeEEecCCc
Q 023786 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLD---HLVVATD---DEKIAECCQQF-GADVIMTSES 119 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~---~IvVvt~---~~~i~~~~~~~-g~~vi~~~~~ 119 (277)
++++.+|||+-.... ..|..+|+.+.+...-+ +||||-+ ++.+.+.+..+ +++++..++.
T Consensus 65 ~p~vSVIIp~yN~~~-------------~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~~~~n 131 (501)
T 2ffu_A 65 LPATSVVITFHNEAR-------------SALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRR 131 (501)
T ss_dssp CCCEEEEEEESSCCH-------------HHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEEECSSC
T ss_pred CCCEEEEEEeCcCcH-------------HHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCCCEEEEECCCC
Confidence 556777777754331 26777777776532222 7777764 33333333333 4555544322
Q ss_pred CCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCc
Q 023786 120 CRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169 (277)
Q Consensus 120 ~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~ 169 (277)
.|. .....|++.. ..|+++++|+|. .++++.++.+++.+.++...
T Consensus 132 --~G~~~A~N~G~~~A--~gd~i~flD~D~-~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 132 --EGLMRSRVRGADAA--QAKVLTFLDSHC-ECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp --CHHHHHHHHHHHHC--CSSEEEECCSSE-EECTTCHHHHHHHHHHCTTE
T ss_pred --cCHHHHHHHHHHhc--CCCEEEEECCCc-ccCccHHHHHHHHHHhCCCe
Confidence 344 3456777777 468999999999 56899999999998775443
No 67
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=95.15 E-value=0.27 Score=40.79 Aligned_cols=99 Identities=14% Similarity=0.185 Sum_probs=61.8
Q ss_pred CceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCC-CeEEEecC--chH----HHHHHHHc-CCeEEecCCc
Q 023786 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTL-DHLVVATD--DEK----IAECCQQF-GADVIMTSES 119 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i-~~IvVvt~--~~~----i~~~~~~~-g~~vi~~~~~ 119 (277)
+++.+|||+-. ....|..+++.+.+...- -+|+|+-+ .+. +.++..++ .++++. . .
T Consensus 5 p~vsViIp~yn--------------~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~-~ 68 (240)
T 3bcv_A 5 PKVSVIVPIYN--------------VEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-K-K 68 (240)
T ss_dssp CSEEEEEEESS--------------CTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-C-C
T ss_pred CcEEEEEecCC--------------CHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-C-C
Confidence 45777777653 235677888888754221 26777654 122 22333333 344443 2 2
Q ss_pred CCCcHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHc
Q 023786 120 CRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165 (277)
Q Consensus 120 ~~~g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~ 165 (277)
..|.......|++.. ..|+++++|+|. ++.++.++.+++.+.+
T Consensus 69 n~G~~~a~N~g~~~a--~g~~i~~lD~Dd-~~~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 69 NAGLGMACNSGLDVA--TGEYVAFCDSDD-YVDSDMYMTMYNVAQK 111 (240)
T ss_dssp CCCHHHHHHHHHHHC--CSSEEEECCTTC-CCCTTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHc--CCCEEEEECCCC-cCCHHHHHHHHHHHHh
Confidence 223334456788877 469999999998 6789999999998876
No 68
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=94.88 E-value=0.62 Score=44.83 Aligned_cols=92 Identities=9% Similarity=0.108 Sum_probs=57.4
Q ss_pred chHHHHHHHHhccCCCC---eEEEecC---chH----HHHHHHHc-CCeEEecCCcCCCcHHHHHHHHHHcccCCCEEEE
Q 023786 75 PMIQRTWERSKLATTLD---HLVVATD---DEK----IAECCQQF-GADVIMTSESCRNGTERCNEALQKLEKKYDIVVN 143 (277)
Q Consensus 75 pLi~~~i~~l~~~~~i~---~IvVvt~---~~~----i~~~~~~~-g~~vi~~~~~~~~g~~~i~~al~~~~~~~d~vlv 143 (277)
..|..+|+.+.+...-+ +||||-+ ++. +.+++.++ .++++..++. .|-......|++.. ..|++++
T Consensus 126 ~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~~~A~N~G~~~A--~gd~i~f 202 (570)
T 2d7i_A 126 SSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGLIRTRMLGASVA--TGDVITF 202 (570)
T ss_dssp HHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCHHHHHHHHHHHC--CSSEEEE
T ss_pred HHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCHHHHHHHHHHhc--CCCEEEE
Confidence 46777888776532222 7777764 222 22333333 3555554322 23333456677777 4689999
Q ss_pred EcCCcccCCHHHHHHHHHHHHcCCCcE
Q 023786 144 IQGDEPLIEPEIIDGVVKALQAAPDAV 170 (277)
Q Consensus 144 ~~gD~P~i~~~~i~~li~~~~~~~~~~ 170 (277)
+|+|. .++++.++.+++.+.++.+.+
T Consensus 203 LD~D~-~~~p~~L~~ll~~l~~~~~~v 228 (570)
T 2d7i_A 203 LDSHC-EANVNWLPPLLDRIARNRKTI 228 (570)
T ss_dssp CCSSE-EECTTCSHHHHHHHHHCTTEE
T ss_pred EcCCc-cccccHHHHHHHHHHhCCCEE
Confidence 99999 558899999999987765543
No 69
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=94.84 E-value=0.2 Score=46.05 Aligned_cols=107 Identities=20% Similarity=0.315 Sum_probs=68.1
Q ss_pred CCceEEEEecCCCCccccccccccccccchHHHHHHHH----hccCCCCeEEEecC--chHHHHHHHHcCCeEEecC---
Q 023786 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERS----KLATTLDHLVVATD--DEKIAECCQQFGADVIMTS--- 117 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l----~~~~~i~~IvVvt~--~~~i~~~~~~~g~~vi~~~--- 117 (277)
.+++.+|||+--... .|..+++.+ .+.+...+|+|+-+ .+...+++++++.+++...
T Consensus 93 ~p~vSVVIP~yNe~~--------------~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~ 158 (387)
T 3f1y_A 93 GLTVSAVLPSRNVAD--------------TVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELM 158 (387)
T ss_dssp TCCEEEEEEESSCTT--------------THHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTT
T ss_pred CCeEEEEEEcCCCHH--------------HHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeE
Confidence 567888888764433 334444444 33333458888765 2555677777877765321
Q ss_pred --CcCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCc
Q 023786 118 --ESCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDA 169 (277)
Q Consensus 118 --~~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~ 169 (277)
.....|. ..+..|++.. ..|+++++|+|.-..+++.+..+++.+.+++++
T Consensus 159 i~~~~n~G~g~A~n~G~~~A--~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~ 211 (387)
T 3f1y_A 159 SGYGDAHGKGDAMWRALSVT--RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGV 211 (387)
T ss_dssp GGGCSCCSHHHHHHHHTTTC--CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTC
T ss_pred ecCCccCCHHHHHHHHHHhc--CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCc
Confidence 1112344 3466677666 469999999999437899999999988654333
No 70
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=93.44 E-value=0.47 Score=45.78 Aligned_cols=104 Identities=17% Similarity=0.169 Sum_probs=66.6
Q ss_pred CCceEEEEecCCCCccccccccccccccchHHHHHHHHhccC--CCCeEEEecC--chHHHHHHHHc----CCeEEecCC
Q 023786 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLAT--TLDHLVVATD--DEKIAECCQQF----GADVIMTSE 118 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~--~i~~IvVvt~--~~~i~~~~~~~----g~~vi~~~~ 118 (277)
++++.+||++-.. ...|..+++.+.+.. .-.+|+|+-+ .+...+.++++ ++.++..+.
T Consensus 92 ~p~vsviIp~~n~--------------~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~~ 157 (625)
T 2z86_A 92 IDGLSIVIPTYNR--------------AKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKD 157 (625)
T ss_dssp CCCEEEEEEESSC--------------HHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEECC
T ss_pred CCcEEEEEecCCc--------------HHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeCC
Confidence 4567777776532 356788888887652 1236777654 34445555543 455554432
Q ss_pred cCCCcH-HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCC
Q 023786 119 SCRNGT-ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD 168 (277)
Q Consensus 119 ~~~~g~-~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~ 168 (277)
...|. .....|++.. ..|+++++|+|. .++++.++.+++.+.+++.
T Consensus 158 -~~~g~~~a~N~g~~~a--~g~~v~~lD~D~-~~~~~~l~~~~~~~~~~~~ 204 (625)
T 2z86_A 158 -YGYQLCAVRNLGLRAA--KYNYVAILDCDM-APNPLWVQSYMELLAVDDN 204 (625)
T ss_dssp -CSCCHHHHHHHHHHHC--CSSEEEEECTTE-EECTTHHHHHHHHHHHCTT
T ss_pred -CCcchhHHHHHHHHhC--CcCEEEEECCCC-CCCHHHHHHHHHHHhcCCc
Confidence 22233 3456678777 468999999999 5589999999998876543
No 71
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=93.30 E-value=0.74 Score=44.39 Aligned_cols=93 Identities=14% Similarity=0.175 Sum_probs=58.2
Q ss_pred cccchHHHHHHHHhccCCCC-eEEEecC--chHHHHHHHH----c-CCeEEecCCcCCCcHHHHHHHHHHcccCCCEEEE
Q 023786 72 LGKPMIQRTWERSKLATTLD-HLVVATD--DEKIAECCQQ----F-GADVIMTSESCRNGTERCNEALQKLEKKYDIVVN 143 (277)
Q Consensus 72 ~GkpLi~~~i~~l~~~~~i~-~IvVvt~--~~~i~~~~~~----~-g~~vi~~~~~~~~g~~~i~~al~~~~~~~d~vlv 143 (277)
+....|..+|+.+.+....+ +|+|+-+ .+...+++++ . .+.++. +.-.|-......|++.. ..|++++
T Consensus 385 n~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~--~~n~G~~~a~n~g~~~a--~g~~i~~ 460 (625)
T 2z86_A 385 NCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS--QKNKGIGSASNTAVRLC--RGFYIGQ 460 (625)
T ss_dssp SCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE--ECCCCHHHHHHHHHHHC--CSSEEEE
T ss_pred CCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe--CCCCCHHHHHHHHHHhc--CCCEEEE
Confidence 45568899999987642222 6666653 2223333332 2 344443 22223334566788777 4689999
Q ss_pred EcCCcccCCHHHHHHHHHHHHcCCCc
Q 023786 144 IQGDEPLIEPEIIDGVVKALQAAPDA 169 (277)
Q Consensus 144 ~~gD~P~i~~~~i~~li~~~~~~~~~ 169 (277)
+|+|. .+.++.++.+++.+.++++.
T Consensus 461 ld~D~-~~~~~~l~~~~~~~~~~~~~ 485 (625)
T 2z86_A 461 LDSDD-FLEPDAVELCLDEFRKDLSL 485 (625)
T ss_dssp CCTTC-EECTTHHHHHHHHHHHCTTC
T ss_pred ECCCc-ccChhHHHHHHHHHHhCCCe
Confidence 99998 66899999999988654443
No 72
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=89.51 E-value=2.9 Score=38.46 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=33.9
Q ss_pred HHHHHHHH----HHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEE
Q 023786 124 TERCNEAL----QKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFS 172 (277)
Q Consensus 124 ~~~i~~al----~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~ 172 (277)
...+..|+ +.. +.|+++++|||.=-.+|+.+.++++...++.|.+++
T Consensus 77 G~Al~~G~~~Al~~a--~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g 127 (397)
T 2bo4_A 77 GDGMNTALRYFLEET--QWERIHFYDADITSFGPDWITKAEEAADFGYGLVRH 127 (397)
T ss_dssp HHHHHHHHHHHHHHC--CCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHhC--CCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEE
Confidence 34577788 554 578999999997325899999999987654454333
No 73
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=88.67 E-value=0.65 Score=45.70 Aligned_cols=92 Identities=10% Similarity=0.106 Sum_probs=58.2
Q ss_pred cccchHHHHHHHHhccC----CCCeEEEecCc-------hHHHHHHHHc--CCeEEecCCcCCCcHHHHHHHHHHccc--
Q 023786 72 LGKPMIQRTWERSKLAT----TLDHLVVATDD-------EKIAECCQQF--GADVIMTSESCRNGTERCNEALQKLEK-- 136 (277)
Q Consensus 72 ~GkpLi~~~i~~l~~~~----~i~~IvVvt~~-------~~i~~~~~~~--g~~vi~~~~~~~~g~~~i~~al~~~~~-- 136 (277)
++...|...|+.+.+.. ...+||||-+. +.+.+.++.. .+.++..+ -.|.......|++....
T Consensus 190 N~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~~--N~G~a~a~N~Gl~~A~g~~ 267 (657)
T 4fix_A 190 NRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQP--NLGGSGGYSRVMYEALKNT 267 (657)
T ss_dssp SCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEECC--CCHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEECC--CCCHHHHHHHHHHHHHhcC
Confidence 55668888888887542 24477776541 1344444332 35555432 22333344456655421
Q ss_pred CCCEEEEEcCCcccCCHHHHHHHHHHHHcC
Q 023786 137 KYDIVVNIQGDEPLIEPEIIDGVVKALQAA 166 (277)
Q Consensus 137 ~~d~vlv~~gD~P~i~~~~i~~li~~~~~~ 166 (277)
+.|+++++|.|. .+.++.++.+++.+...
T Consensus 268 ~~dyIlfLD~D~-~~~pd~L~~ll~~l~~~ 296 (657)
T 4fix_A 268 DCQQILFMDDDI-RLEPDSILRVLAMHRFA 296 (657)
T ss_dssp CCSEEEEECSSE-EECTHHHHHHHHHHHHB
T ss_pred CCCEEEEECCCC-ccChhHHHHHHHHHHhC
Confidence 479999999999 77899999999988764
No 74
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=75.10 E-value=0.59 Score=46.25 Aligned_cols=86 Identities=15% Similarity=0.171 Sum_probs=0.0
Q ss_pred chHHHHHHHHhccCC-CCeEEEecC--chHHHHHHH----Hc--CCeEEecCCcCCCcHHHHHHHHHHcccCCCEEEEEc
Q 023786 75 PMIQRTWERSKLATT-LDHLVVATD--DEKIAECCQ----QF--GADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQ 145 (277)
Q Consensus 75 pLi~~~i~~l~~~~~-i~~IvVvt~--~~~i~~~~~----~~--g~~vi~~~~~~~~g~~~i~~al~~~~~~~d~vlv~~ 145 (277)
..|..+|+.+.+... --+|+|+-+ .+...++++ ++ .++++..++. .|.......|++.. ..|+++++|
T Consensus 15 ~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n-~G~~~arN~gi~~A--~gdyI~flD 91 (729)
T 3l7i_A 15 EYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDEN-SGHAHARNIALEEV--ETPYFMFLD 91 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCC-CCHHHHHHHHHHhc--cCCEEEEEC
Confidence 345555555543311 125666554 233333333 22 3444443222 22223345566666 468999999
Q ss_pred CCcccCCHHHHHHHHHHHH
Q 023786 146 GDEPLIEPEIIDGVVKALQ 164 (277)
Q Consensus 146 gD~P~i~~~~i~~li~~~~ 164 (277)
+|. .+.++.++.+++.+.
T Consensus 92 ~Dd-~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 92 ADD-ELASYAITFYLEKFN 109 (729)
T ss_dssp -------------------
T ss_pred CCC-CCChhHHHHHHHHhc
Confidence 999 568999999998887
No 75
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=59.98 E-value=33 Score=30.70 Aligned_cols=102 Identities=14% Similarity=0.212 Sum_probs=58.0
Q ss_pred cccccchHHHHHHHHhccCC-C--CeEEEecC--chHHHHHHHHcCCe--EEecCCc-------CCCcH-------HHHH
Q 023786 70 NILGKPMIQRTWERSKLATT-L--DHLVVATD--DEKIAECCQQFGAD--VIMTSES-------CRNGT-------ERCN 128 (277)
Q Consensus 70 ~i~GkpLi~~~i~~l~~~~~-i--~~IvVvt~--~~~i~~~~~~~g~~--vi~~~~~-------~~~g~-------~~i~ 128 (277)
...++|=+..+++++.+... . ..|+|+-+ .++..++++.++.+ .+..++. ...|. .++.
T Consensus 9 ~~yNRp~l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~~y~~ia~h~~ 88 (343)
T 1fo8_A 9 IACDRSTVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQGYYKIARHYR 88 (343)
T ss_dssp EESSCTTHHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHHHHHHHHHHH
T ss_pred EECCcHHHHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhcCcccchhHhHHHH
Confidence 34566668888888877632 2 25676665 46777777766433 2211111 01122 2344
Q ss_pred HHHHHccc--CCCEEEEEcCCcccCCHHHHHHHHHHH---HcCCCcEEEE
Q 023786 129 EALQKLEK--KYDIVVNIQGDEPLIEPEIIDGVVKAL---QAAPDAVFST 173 (277)
Q Consensus 129 ~al~~~~~--~~d~vlv~~gD~P~i~~~~i~~li~~~---~~~~~~~v~~ 173 (277)
.|+..+-. ..+.++++..|+ .++|+-++-+.+.+ +.+ ..+..+
T Consensus 89 ~al~~vf~~~~~~~vIiLEDDl-~~spdF~~y~~~~l~~y~~D-~~I~~I 136 (343)
T 1fo8_A 89 WALGQIFHNFNYPAAVVVEDDL-EVAPDFFEYFQATYPLLKAD-PSLWCV 136 (343)
T ss_dssp HHHHHHHTTSCCSEEEEEETTE-EECTTHHHHHHHHHHHHHHC-TTEEEE
T ss_pred HHHHHHHHhccCCEEEEEcCCC-eECHHHHHHHHHHHHHhhcC-CcEEEE
Confidence 56654322 478999999999 77787665555444 443 445444
No 76
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=56.93 E-value=86 Score=26.19 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=42.9
Q ss_pred hHHHHHHHHhccC-CCCeEEEecCc--hHHHHHHHHcCCeEEe-cCCcCCCc---HHHHHHHHHHcccCCCEEEEEcCCc
Q 023786 76 MIQRTWERSKLAT-TLDHLVVATDD--EKIAECCQQFGADVIM-TSESCRNG---TERCNEALQKLEKKYDIVVNIQGDE 148 (277)
Q Consensus 76 Li~~~i~~l~~~~-~i~~IvVvt~~--~~i~~~~~~~g~~vi~-~~~~~~~g---~~~i~~al~~~~~~~d~vlv~~gD~ 148 (277)
.+..+++++.+.. ..+-+.|+++. ....+.++++|+.+.. .+.....- ...+...++.. +.| ++++-+=+
T Consensus 35 ~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~--~~D-liv~agy~ 111 (229)
T 3auf_A 35 NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFDAALAERLQAY--GVD-LVCLAGYM 111 (229)
T ss_dssp HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHHT--TCS-EEEESSCC
T ss_pred HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhccHHHHHHHHhc--CCC-EEEEcChh
Confidence 4555666665432 23334556663 3456778889998864 33332221 12244555555 456 45556666
Q ss_pred ccCCHHHHH
Q 023786 149 PLIEPEIID 157 (277)
Q Consensus 149 P~i~~~~i~ 157 (277)
-+++++.++
T Consensus 112 ~IL~~~~l~ 120 (229)
T 3auf_A 112 RLVRGPMLT 120 (229)
T ss_dssp SCCCHHHHH
T ss_pred HhCCHHHHh
Confidence 677776554
No 77
>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*
Probab=52.94 E-value=4.2 Score=21.92 Aligned_cols=22 Identities=27% Similarity=0.493 Sum_probs=17.3
Q ss_pred CCCCCCCCCchhHHHHHHhhcc
Q 023786 7 CSPSESSSSTKSWIVHGIVAGA 28 (277)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~ 28 (277)
|+.|.++--.+-=|+|+++.+-
T Consensus 1 cpss~~sL~EkHkILHrLLQ~~ 22 (26)
T 3bej_E 1 CPSSHSSLTERHKILHRLLQEG 22 (26)
T ss_pred CCCchhhHHHHHHHHHHHHHcC
Confidence 7777777777888999999763
No 78
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=52.27 E-value=98 Score=25.45 Aligned_cols=87 Identities=14% Similarity=0.150 Sum_probs=47.4
Q ss_pred EEEecCCCCccccccccccccccchHHHHHHHHhccCCC--CeEEEecCc--hHHHHHHHHcCCeEEe-cCCcCCCc---
Q 023786 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTL--DHLVVATDD--EKIAECCQQFGADVIM-TSESCRNG--- 123 (277)
Q Consensus 52 aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i--~~IvVvt~~--~~i~~~~~~~g~~vi~-~~~~~~~g--- 123 (277)
.++++.|.|+ .+..+++++.+. .. +-+.|+++. ....+.++++|+.+.. .+.....-
T Consensus 4 I~vl~SG~g~--------------~~~~~l~~l~~~-~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~ 68 (216)
T 2ywr_A 4 IGVLVSGRGS--------------NLQAIIDAIESG-KVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEF 68 (216)
T ss_dssp EEEEECSCCH--------------HHHHHHHHHHTT-SSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHH
T ss_pred EEEEEeCCcH--------------HHHHHHHHHHhC-CCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccccchhhh
Confidence 5666666664 455666666553 33 334556653 4456778888998764 33222221
Q ss_pred HHHHHHHHHHcccCCCEEEEEcCCcccCCHHHH
Q 023786 124 TERCNEALQKLEKKYDIVVNIQGDEPLIEPEII 156 (277)
Q Consensus 124 ~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i 156 (277)
...+...++.. +.| ++++-+=+-+++++.+
T Consensus 69 ~~~~~~~l~~~--~~D-liv~a~y~~il~~~~l 98 (216)
T 2ywr_A 69 EERMALELKKK--GVE-LVVLAGFMRILSHNFL 98 (216)
T ss_dssp HHHHHHHHHHT--TCC-EEEESSCCSCCCHHHH
T ss_pred hHHHHHHHHhc--CCC-EEEEeCchhhCCHHHH
Confidence 12244455554 356 4555555557776544
No 79
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=44.76 E-value=1.3e+02 Score=24.72 Aligned_cols=94 Identities=15% Similarity=0.100 Sum_probs=51.7
Q ss_pred CCceEEEEecCCCCccccccccccccccchHHHHHHHHhccC-CCCeEEEecCch--HHHHHHHHcCCeEEecC-CcCCC
Q 023786 47 RSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLAT-TLDHLVVATDDE--KIAECCQQFGADVIMTS-ESCRN 122 (277)
Q Consensus 47 ~m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~-~i~~IvVvt~~~--~i~~~~~~~g~~vi~~~-~~~~~ 122 (277)
|++....|++.|.|+ .++-.++++.+-. .++-+.|+++.+ .-.+.++++|+.+...+ ..+..
T Consensus 5 m~~~ri~vl~SG~gs--------------nl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~~~ 70 (209)
T 4ds3_A 5 MKRNRVVIFISGGGS--------------NMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFAS 70 (209)
T ss_dssp -CCEEEEEEESSCCH--------------HHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGSSS
T ss_pred CCCccEEEEEECCcH--------------HHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccccCC
Confidence 555667888888886 3455666665421 123344556532 33467788899876532 22222
Q ss_pred c---HHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHH
Q 023786 123 G---TERCNEALQKLEKKYDIVVNIQGDEPLIEPEIID 157 (277)
Q Consensus 123 g---~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~ 157 (277)
- ...+...++.. +.| ++++-+=+-+++++.++
T Consensus 71 r~~~d~~~~~~l~~~--~~D-liv~agy~~il~~~~l~ 105 (209)
T 4ds3_A 71 KEAHEDAILAALDVL--KPD-IICLAGYMRLLSGRFIA 105 (209)
T ss_dssp HHHHHHHHHHHHHHH--CCS-EEEESSCCSCCCHHHHG
T ss_pred HHHHHHHHHHHHHhc--CCC-EEEEeccccCcCHHHHh
Confidence 1 12345556555 456 45556666577776554
No 80
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=43.92 E-value=35 Score=29.94 Aligned_cols=109 Identities=15% Similarity=0.208 Sum_probs=67.7
Q ss_pred CceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCchH---HHHHHHHc---CCeEEecCCcCC
Q 023786 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEK---IAECCQQF---GADVIMTSESCR 121 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~~---i~~~~~~~---g~~vi~~~~~~~ 121 (277)
.+.++||.+-- | ..+|...++.+.+++.+++|+|+=+.+. -....... ++.+.+..+...
T Consensus 28 ~~FTvvi~ty~---R-----------~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~n 93 (293)
T 1omz_A 28 DSFTLIMQTYN---R-----------TDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTAN 93 (293)
T ss_dssp TCEEEEEEESS---C-----------HHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSC
T ss_pred CceEEEEEeec---c-----------cHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCC
Confidence 45677776652 2 2567788888888889999999875321 11112222 355543322211
Q ss_pred CcHHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHcCCCcEEEEE
Q 023786 122 NGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTA 174 (277)
Q Consensus 122 ~g~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~~~~~~v~~~ 174 (277)
.-..|.. -...+ +.|.||.+|-|. .++.++++...+..++.++-+|+..
T Consensus 94 sLnnRF~-p~~~i--~T~AVLslDDDv-~l~~~el~faF~vWr~~PdRlVGf~ 142 (293)
T 1omz_A 94 KMRNRLQ-VFPEV--ETNAVLMVDDDT-LISAQDLVFAFSIWQQFPDQIIGFV 142 (293)
T ss_dssp CGGGGGS-CCTTC--CSSEEEEECTTE-EECHHHHHHHHHHHTTSTTSEEESC
T ss_pred chhhccC-CCccC--CcCEEEEEcCCC-CCCHHHHHHHHHHHHHCccceecCc
Confidence 1111211 01112 578999999998 8899999999888888788888754
No 81
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=43.24 E-value=1.4e+02 Score=24.50 Aligned_cols=89 Identities=13% Similarity=0.144 Sum_probs=48.1
Q ss_pred EEEecCCCCccccccccccccccchHHHHHHHHhccC-CCCeEEEecCc--hHHHHHHHHcCCeEEe-cCCcCCCc---H
Q 023786 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLAT-TLDHLVVATDD--EKIAECCQQFGADVIM-TSESCRNG---T 124 (277)
Q Consensus 52 aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~-~i~~IvVvt~~--~~i~~~~~~~g~~vi~-~~~~~~~g---~ 124 (277)
..|++.|.|+ .+...++++.+.. ..+-+.|+++. ....+.++++|+.+.. .+....+. .
T Consensus 6 i~vl~sG~g~--------------~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~ 71 (212)
T 3av3_A 6 LAVFASGSGT--------------NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFE 71 (212)
T ss_dssp EEEECCSSCH--------------HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH
T ss_pred EEEEEECCcH--------------HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhH
Confidence 5566666664 3455566665431 23334456653 4566778889998864 33332221 1
Q ss_pred HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHH
Q 023786 125 ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIID 157 (277)
Q Consensus 125 ~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~ 157 (277)
..+...++.. +.| ++++-+=+-+++++.++
T Consensus 72 ~~~~~~l~~~--~~D-liv~a~y~~il~~~~l~ 101 (212)
T 3av3_A 72 SEILRELKGR--QID-WIALAGYMRLIGPTLLS 101 (212)
T ss_dssp HHHHHHHHHT--TCC-EEEESSCCSCCCHHHHH
T ss_pred HHHHHHHHhc--CCC-EEEEchhhhhCCHHHHh
Confidence 1244555555 356 45556655577775554
No 82
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=38.13 E-value=39 Score=28.07 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=28.0
Q ss_pred HHHHHHHcccCCCEEEEEcCCcccCCHHHHHHHHHHHHc
Q 023786 127 CNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQA 165 (277)
Q Consensus 127 i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~~ 165 (277)
.-.|++.. ..|++++++.|. .++++.++.+++.+.+
T Consensus 66 ~N~Gi~~A--~g~yl~fln~D~-~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 66 HKQMLPRC--KGRYVIFCHEDV-ELVDRGYDDLVAAIEA 101 (249)
T ss_dssp HHHHGGGC--CSSEEEEEETTE-ECSSCCHHHHHHHHHH
T ss_pred HHHHHHhc--CCCEEEEECCCc-ccCccHHHHHHHHHHh
Confidence 34566655 468999999999 5588889999988764
No 83
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=36.62 E-value=1.8e+02 Score=23.97 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=24.3
Q ss_pred cCCCEEEEEcCC---cccCCHHHHHHHHHHHHcCCCcEEE
Q 023786 136 KKYDIVVNIQGD---EPLIEPEIIDGVVKALQAAPDAVFS 172 (277)
Q Consensus 136 ~~~d~vlv~~gD---~P~i~~~~i~~li~~~~~~~~~~v~ 172 (277)
.++|+++.+|+| . -++|+++.++++ .+.|.+++
T Consensus 52 ~~~dhllfIDAD~~~I-~FdPe~V~rLl~---~g~DVV~G 87 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPI-EIDFQKVEAKFN---EGYDVVCG 87 (203)
T ss_dssp TTCCEEEEECTTEEEE-ECCHHHHHHHHH---HTCSEEEE
T ss_pred CCCCEEEEEeCCCCcc-ccCHHHHHHHHh---CCCCEEEE
Confidence 368999999999 7 568999988883 33454444
No 84
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=36.20 E-value=1.8e+02 Score=23.91 Aligned_cols=89 Identities=17% Similarity=0.207 Sum_probs=49.8
Q ss_pred EEEecCCCCccccccccccccccchHHHHHHHHhccCCCC-eE-EEecCc--hHHHHHHHHcCCeEEe-cCCcCCCcH--
Q 023786 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLD-HL-VVATDD--EKIAECCQQFGADVIM-TSESCRNGT-- 124 (277)
Q Consensus 52 aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~-~I-vVvt~~--~~i~~~~~~~g~~vi~-~~~~~~~g~-- 124 (277)
..|++.|.||= ++-.+++..+- .+. +| .|+++. ..+.+.++++|+.+.. .+.......
T Consensus 5 iavl~Sg~Gsn--------------l~ali~~~~~~-~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~ 69 (211)
T 3p9x_A 5 VAIFASGSGTN--------------AEAIIQSQKAG-QLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAY 69 (211)
T ss_dssp EEEECCTTCHH--------------HHHHHHHHHTT-CCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGGGSSSHHHH
T ss_pred EEEEEeCCchH--------------HHHHHHHHHcC-CCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChhhcCchhhh
Confidence 67888888862 34455555432 221 44 445552 4566778888998754 333332211
Q ss_pred -HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHHH
Q 023786 125 -ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDG 158 (277)
Q Consensus 125 -~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~ 158 (277)
..+...++.. +.| ++++-+=+-+++++.++.
T Consensus 70 d~~~~~~l~~~--~~D-liv~agy~~Il~~~~l~~ 101 (211)
T 3p9x_A 70 EIEVVQQLKEK--QID-FVVLAGYMRLVGPTLLGA 101 (211)
T ss_dssp HHHHHHHHHHT--TCC-EEEESSCCSCCCHHHHHH
T ss_pred HHHHHHHHHhc--CCC-EEEEeCchhhcCHHHHhh
Confidence 2345556655 456 455566665787765543
No 85
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=34.92 E-value=1.9e+02 Score=23.80 Aligned_cols=93 Identities=14% Similarity=0.115 Sum_probs=47.9
Q ss_pred CceEEEEecCCCCccccccccccccccchHHHHHHHHhccCCCCeEEEecCch-HHHHHHHHcCCeEEecCC-cCCCc--
Q 023786 48 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDE-KIAECCQQFGADVIMTSE-SCRNG-- 123 (277)
Q Consensus 48 m~i~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~~i~~IvVvt~~~-~i~~~~~~~g~~vi~~~~-~~~~g-- 123 (277)
++...+|++.|.|+ .++..+++..+.-.++-+.|+++.+ ...+.++++|+.+...+. ....-
T Consensus 11 ~~~ri~vl~SG~gs--------------nl~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~~~~~~~~r~~ 76 (215)
T 3da8_A 11 APARLVVLASGTGS--------------LLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADHPSRDA 76 (215)
T ss_dssp SSEEEEEEESSCCH--------------HHHHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHTTCCEEECCGGGSSSHHH
T ss_pred CCcEEEEEEeCChH--------------HHHHHHHHHhccCCCeEEEEEeCCchHHHHHHHHcCCCEEEeCcccccchhh
Confidence 34457788888775 3444555543210123344555543 345678888998765421 11111
Q ss_pred -HHHHHHHHHHcccCCCEEEEEcCCcccCCHHHHH
Q 023786 124 -TERCNEALQKLEKKYDIVVNIQGDEPLIEPEIID 157 (277)
Q Consensus 124 -~~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~ 157 (277)
...+...++.. +.|. +++-+=+-+++++.++
T Consensus 77 ~d~~~~~~l~~~--~~Dl-ivlagy~~iL~~~~l~ 108 (215)
T 3da8_A 77 WDVAITAATAAH--EPDL-VVSAGFMRILGPQFLS 108 (215)
T ss_dssp HHHHHHHHHHTT--CCSE-EEEEECCSCCCHHHHH
T ss_pred hhHHHHHHHHhh--CCCE-EEEcCchhhCCHHHHh
Confidence 11244455544 4575 4445555477776554
No 86
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=34.52 E-value=2.2e+02 Score=24.46 Aligned_cols=90 Identities=9% Similarity=0.131 Sum_probs=51.2
Q ss_pred EEEEecCCCCccccccccccccccchHHHHHHHHhccC-CCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCc---HHH
Q 023786 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLAT-TLDHLVVATDDEKIAECCQQFGADVIMTSESCRNG---TER 126 (277)
Q Consensus 51 ~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~-~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g---~~~ 126 (277)
..+|++.|.|+ -++..+++...-. .++-+.|+++.+....+++++|+.+...+.....- ...
T Consensus 92 ri~vl~Sg~g~--------------~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~ 157 (286)
T 3n0v_A 92 KVVIMVSKADH--------------CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPYYHFALDPKDKPGQERK 157 (286)
T ss_dssp EEEEEESSCCH--------------HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCBTTBHHHHHHH
T ss_pred EEEEEEeCCCC--------------CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcCCHHHHHHH
Confidence 37788888875 3344455544311 23334556666666677888999887543221111 112
Q ss_pred HHHHHHHcccCCCEEEEEcCCcccCCHHHHH
Q 023786 127 CNEALQKLEKKYDIVVNIQGDEPLIEPEIID 157 (277)
Q Consensus 127 i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~ 157 (277)
+...++.. +.| ++++-+=+-.++++.++
T Consensus 158 ~~~~l~~~--~~D-livla~y~~il~~~~l~ 185 (286)
T 3n0v_A 158 VLQVIEET--GAE-LVILARYMQVLSPELCR 185 (286)
T ss_dssp HHHHHHHH--TCS-EEEESSCCSCCCHHHHH
T ss_pred HHHHHHhc--CCC-EEEecccccccCHHHHh
Confidence 44555555 456 56667777688876554
No 87
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=31.12 E-value=2.6e+02 Score=24.26 Aligned_cols=89 Identities=10% Similarity=0.098 Sum_probs=50.7
Q ss_pred EEEecCCCCccccccccccccccchHHHHHHHHhccC-CCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCcH---HHH
Q 023786 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLAT-TLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGT---ERC 127 (277)
Q Consensus 52 aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~-~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g~---~~i 127 (277)
.+|++.|.|+ -++..+++...-. .++-+.|+++.+...+.++++|+.+...+.....-. ..+
T Consensus 108 i~vl~Sg~g~--------------nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~ 173 (302)
T 3o1l_A 108 VVLMASRESH--------------CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPYYHVPVDPKDKEPAFAEV 173 (302)
T ss_dssp EEEEECSCCH--------------HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCEEECCCCSSCCHHHHHHH
T ss_pred EEEEEeCCch--------------hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCEEEcCCCcCCHHHHHHHH
Confidence 7788888876 2344445444311 233345566666667788889998865432211111 234
Q ss_pred HHHHHHcccCCCEEEEEcCCcccCCHHHHH
Q 023786 128 NEALQKLEKKYDIVVNIQGDEPLIEPEIID 157 (277)
Q Consensus 128 ~~al~~~~~~~d~vlv~~gD~P~i~~~~i~ 157 (277)
...++.. +.| ++++-+=+-.++++.++
T Consensus 174 ~~~l~~~--~~D-liVlagym~IL~~~~l~ 200 (302)
T 3o1l_A 174 SRLVGHH--QAD-VVVLARYMQILPPQLCR 200 (302)
T ss_dssp HHHHHHT--TCS-EEEESSCCSCCCTTHHH
T ss_pred HHHHHHh--CCC-EEEHhHhhhhcCHHHHh
Confidence 5555555 356 56667776677775554
No 88
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.33 E-value=2.9e+02 Score=23.83 Aligned_cols=91 Identities=11% Similarity=0.092 Sum_probs=51.6
Q ss_pred EEEEecCCCCccccccccccccccchHHHHHHHHhccC-CCCeEEEecCchHHHHHHHHcCCeEEecCCcCCCcH---HH
Q 023786 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLAT-TLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGT---ER 126 (277)
Q Consensus 51 ~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~-~i~~IvVvt~~~~i~~~~~~~g~~vi~~~~~~~~g~---~~ 126 (277)
..+|++.|.|+ -++..+++...-. .++-+.|+++.+....+++++|+.+...+.....-. ..
T Consensus 97 ri~vl~Sg~g~--------------~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~ 162 (292)
T 3lou_A 97 KVLIMVSKLEH--------------CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPFRHFPITADTKAQQEAQ 162 (292)
T ss_dssp EEEEEECSCCH--------------HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCCSSCHHHHHHH
T ss_pred EEEEEEcCCCc--------------CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcCCHHHHHHH
Confidence 37788888875 2344444443211 234445566666666778889998875432221111 22
Q ss_pred HHHHHHHcccCCCEEEEEcCCcccCCHHHHHH
Q 023786 127 CNEALQKLEKKYDIVVNIQGDEPLIEPEIIDG 158 (277)
Q Consensus 127 i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~~ 158 (277)
+...++.. +.| ++++-+=+-.++++.++.
T Consensus 163 ~~~~l~~~--~~D-livla~y~~il~~~~l~~ 191 (292)
T 3lou_A 163 WLDVFETS--GAE-LVILARYMQVLSPEASAR 191 (292)
T ss_dssp HHHHHHHH--TCS-EEEESSCCSCCCHHHHHH
T ss_pred HHHHHHHh--CCC-EEEecCchhhCCHHHHhh
Confidence 44555555 456 566677776888765543
No 89
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=27.78 E-value=2.5e+02 Score=22.90 Aligned_cols=89 Identities=13% Similarity=0.062 Sum_probs=49.0
Q ss_pred EEEecCCCCccccccccccccccchHHHHHHHHhccC-CCCeEEEecCc--hHHHHHHHHcCCeEEecC-CcCCCc---H
Q 023786 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLAT-TLDHLVVATDD--EKIAECCQQFGADVIMTS-ESCRNG---T 124 (277)
Q Consensus 52 aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~-~i~~IvVvt~~--~~i~~~~~~~g~~vi~~~-~~~~~g---~ 124 (277)
.+|++.|.|| .++..++++.+-. ..+-+.|+|+. ....+.++++|+.++..+ .....- .
T Consensus 3 i~vl~Sg~gs--------------nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~ 68 (212)
T 1jkx_A 3 IVVLISGNGS--------------NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYD 68 (212)
T ss_dssp EEEEESSCCH--------------HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHH
T ss_pred EEEEEECCcH--------------HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccchhhcc
Confidence 5677777775 3455666665431 13334556653 445677888999886532 222211 1
Q ss_pred HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHH
Q 023786 125 ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIID 157 (277)
Q Consensus 125 ~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~ 157 (277)
..+...++.. +.| ++++-+=+-+++++.++
T Consensus 69 ~~~~~~l~~~--~~D-liv~agy~~il~~~~l~ 98 (212)
T 1jkx_A 69 RELIHEIDMY--APD-VVVLAGFMRILSPAFVS 98 (212)
T ss_dssp HHHHHHHGGG--CCS-EEEESSCCSCCCHHHHH
T ss_pred HHHHHHHHhc--CCC-EEEEeChhhhCCHHHHh
Confidence 2244445544 456 45556666678776554
No 90
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=25.73 E-value=2.9e+02 Score=23.05 Aligned_cols=8 Identities=13% Similarity=0.247 Sum_probs=4.4
Q ss_pred CceEEeee
Q 023786 196 HGYAIYFS 203 (277)
Q Consensus 196 ~g~~~~f~ 203 (277)
.|+++.++
T Consensus 136 ~G~IVnis 143 (254)
T 4fn4_A 136 KGVIVNTA 143 (254)
T ss_dssp CEEEEEEC
T ss_pred CcEEEEEe
Confidence 46666553
No 91
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=25.49 E-value=2.8e+02 Score=22.74 Aligned_cols=88 Identities=10% Similarity=0.089 Sum_probs=48.7
Q ss_pred EEEEecCCCCccccccccccccccchHHHHHHHHhccC-CCCeEEEecCch--HHHHHHHHcCCeEEecC-CcCCCcHHH
Q 023786 51 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLAT-TLDHLVVATDDE--KIAECCQQFGADVIMTS-ESCRNGTER 126 (277)
Q Consensus 51 ~aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~-~i~~IvVvt~~~--~i~~~~~~~g~~vi~~~-~~~~~g~~~ 126 (277)
...|++.|.|+ .++..++++.+-. ..+-+.|+++.+ .-.+.++++|+.+...+ ... ....
T Consensus 10 ri~vl~SG~gs--------------nl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~--~~~~ 73 (215)
T 3kcq_A 10 RVGVLISGRGS--------------NLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPL--DIEH 73 (215)
T ss_dssp EEEEEESSCCH--------------HHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTB--CHHH
T ss_pred EEEEEEECCcH--------------HHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccC--ChHH
Confidence 45667777765 4555666664321 123344555532 24467788899886532 222 1234
Q ss_pred HHHHHHHcccCCCEEEEEcCCcccCCHHHHH
Q 023786 127 CNEALQKLEKKYDIVVNIQGDEPLIEPEIID 157 (277)
Q Consensus 127 i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~ 157 (277)
+...++.. +.| ++++-+=+-+++++.++
T Consensus 74 ~~~~L~~~--~~D-livlagy~~IL~~~~l~ 101 (215)
T 3kcq_A 74 ISTVLREH--DVD-LVCLAGFMSILPEKFVT 101 (215)
T ss_dssp HHHHHHHT--TCS-EEEESSCCSCCCHHHHH
T ss_pred HHHHHHHh--CCC-EEEEeCCceEeCHHHHh
Confidence 55666665 356 45666666678776554
No 92
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=25.28 E-value=3e+02 Score=23.01 Aligned_cols=22 Identities=14% Similarity=0.138 Sum_probs=12.7
Q ss_pred EEEEcCCcccCCHHHHHHHHHHHH
Q 023786 141 VVNIQGDEPLIEPEIIDGVVKALQ 164 (277)
Q Consensus 141 vlv~~gD~P~i~~~~i~~li~~~~ 164 (277)
+..+.+|. .+++.++++++...
T Consensus 60 ~~~~~~Dv--~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 60 AHGVAFDV--TDELAIEAAFSKLD 81 (255)
T ss_dssp EEECCCCT--TCHHHHHHHHHHHH
T ss_pred EEEEEeeC--CCHHHHHHHHHHHH
Confidence 45555664 55666666665554
No 93
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=23.19 E-value=3e+02 Score=22.33 Aligned_cols=89 Identities=11% Similarity=0.122 Sum_probs=48.3
Q ss_pred EEEecCCCCccccccccccccccchHHHHHHHHhccC-CCCeEEEecCc--hHHHHHHHHcCCeEEe-cCCcCCCcH---
Q 023786 52 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLAT-TLDHLVVATDD--EKIAECCQQFGADVIM-TSESCRNGT--- 124 (277)
Q Consensus 52 aIIlAaG~ssRl~~K~l~~i~GkpLi~~~i~~l~~~~-~i~~IvVvt~~--~~i~~~~~~~g~~vi~-~~~~~~~g~--- 124 (277)
..|++.|.|+ .++..++++.+-. ..+-+.|+++. ....+.++++|+.+.. .+.......
T Consensus 3 iaVl~SG~Gs--------------~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~ 68 (209)
T 1meo_A 3 VAVLISGTGS--------------NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFD 68 (209)
T ss_dssp EEEEESSSCT--------------THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH
T ss_pred EEEEEECCch--------------HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCchhhhh
Confidence 5677777774 4555666655421 23334555653 3445678888998864 333332211
Q ss_pred HHHHHHHHHcccCCCEEEEEcCCcccCCHHHHH
Q 023786 125 ERCNEALQKLEKKYDIVVNIQGDEPLIEPEIID 157 (277)
Q Consensus 125 ~~i~~al~~~~~~~d~vlv~~gD~P~i~~~~i~ 157 (277)
..+...++.. +.|. +++-+=+-+++++.++
T Consensus 69 ~~~~~~l~~~--~~Dl-iv~a~y~~il~~~~l~ 98 (209)
T 1meo_A 69 SAIDLVLEEF--SIDI-VCLAGFMRILSGPFVQ 98 (209)
T ss_dssp HHHHHHHHHT--TCCE-EEEESCCSCCCHHHHH
T ss_pred HHHHHHHHhc--CCCE-EEEcchhhhCCHHHHh
Confidence 2344555555 3564 5555555577775554
Done!