Query 023787
Match_columns 277
No_of_seqs 414 out of 2166
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 12:47:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023787.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023787hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xtp_A LMAJ004091AAA; SGPP, st 99.9 2.4E-26 8.3E-31 196.4 13.7 189 66-272 12-200 (254)
2 2ex4_A Adrenal gland protein A 99.9 8.6E-24 2.9E-28 179.7 10.2 163 102-273 27-189 (241)
3 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.1E-21 3.9E-26 169.0 14.3 111 156-273 69-182 (261)
4 3dtn_A Putative methyltransfer 99.8 1.4E-20 4.7E-25 158.9 12.6 110 155-273 42-152 (234)
5 1pjz_A Thiopurine S-methyltran 99.8 1E-20 3.5E-25 156.9 10.3 112 156-268 21-139 (203)
6 3hnr_A Probable methyltransfer 99.8 7.9E-20 2.7E-24 152.6 14.2 105 156-272 44-148 (220)
7 2gb4_A Thiopurine S-methyltran 99.8 1.9E-20 6.4E-25 160.6 10.0 112 156-268 67-190 (252)
8 3h2b_A SAM-dependent methyltra 99.8 5E-20 1.7E-24 152.1 12.0 103 158-272 42-144 (203)
9 2o57_A Putative sarcosine dime 99.8 8.7E-20 3E-24 159.5 13.5 112 155-273 80-191 (297)
10 1kpg_A CFA synthase;, cyclopro 99.8 1.9E-19 6.6E-24 156.5 14.6 110 155-272 62-171 (287)
11 3bus_A REBM, methyltransferase 99.8 2E-19 6.8E-24 155.2 14.6 111 155-272 59-169 (273)
12 4hg2_A Methyltransferase type 99.8 1.9E-20 6.5E-25 160.9 7.8 98 157-270 39-136 (257)
13 1vl5_A Unknown conserved prote 99.8 1.4E-19 4.7E-24 155.3 12.4 109 155-272 35-143 (260)
14 3ujc_A Phosphoethanolamine N-m 99.8 2E-19 7E-24 154.1 13.3 111 155-273 53-163 (266)
15 3jwh_A HEN1; methyltransferase 99.8 3.7E-19 1.3E-23 148.5 14.0 114 156-270 28-142 (217)
16 3l8d_A Methyltransferase; stru 99.8 1.1E-19 3.6E-24 153.9 10.5 103 157-271 53-155 (242)
17 3hem_A Cyclopropane-fatty-acyl 99.8 4.1E-19 1.4E-23 155.8 13.9 111 155-273 70-187 (302)
18 3g5l_A Putative S-adenosylmeth 99.8 3.8E-19 1.3E-23 151.8 13.1 104 155-269 42-145 (253)
19 2fk8_A Methoxy mycolic acid sy 99.8 6.4E-19 2.2E-23 155.6 14.5 111 155-273 88-198 (318)
20 3ou2_A SAM-dependent methyltra 99.8 5.2E-19 1.8E-23 147.1 13.0 106 156-273 45-150 (218)
21 3jwg_A HEN1, methyltransferase 99.8 4.9E-19 1.7E-23 147.9 12.6 115 156-271 28-143 (219)
22 1nkv_A Hypothetical protein YJ 99.8 3.8E-19 1.3E-23 151.9 12.1 109 155-271 34-142 (256)
23 3f4k_A Putative methyltransfer 99.8 5.7E-19 1.9E-23 150.8 13.0 108 155-270 44-151 (257)
24 2pxx_A Uncharacterized protein 99.8 1.1E-18 3.8E-23 144.6 13.9 109 156-272 41-162 (215)
25 3ofk_A Nodulation protein S; N 99.8 3.9E-19 1.3E-23 148.1 11.0 106 155-270 49-155 (216)
26 3dlc_A Putative S-adenosyl-L-m 99.8 2.6E-19 8.8E-24 148.8 9.4 107 159-272 45-151 (219)
27 3mgg_A Methyltransferase; NYSG 99.8 4.9E-19 1.7E-23 153.0 11.3 120 140-270 23-143 (276)
28 1xxl_A YCGJ protein; structura 99.8 4.5E-19 1.5E-23 150.4 10.3 110 155-273 19-128 (239)
29 3kkz_A Uncharacterized protein 99.8 1.2E-18 4.2E-23 149.9 13.0 109 155-271 44-152 (267)
30 2p7i_A Hypothetical protein; p 99.8 8E-19 2.7E-23 148.6 11.5 101 157-271 42-143 (250)
31 3lcc_A Putative methyl chlorid 99.8 7.9E-19 2.7E-23 148.3 10.7 108 157-271 66-173 (235)
32 3e23_A Uncharacterized protein 99.8 1.2E-18 4.2E-23 144.6 11.6 102 156-271 42-143 (211)
33 2xvm_A Tellurite resistance pr 99.8 1.1E-18 3.8E-23 143.0 11.2 109 156-272 31-139 (199)
34 3dh0_A SAM dependent methyltra 99.8 1.6E-18 5.5E-23 144.5 12.1 111 155-273 35-147 (219)
35 4htf_A S-adenosylmethionine-de 99.8 5.8E-19 2E-23 153.4 9.5 106 157-270 68-174 (285)
36 2gs9_A Hypothetical protein TT 99.8 2.8E-18 9.4E-23 142.4 12.4 100 157-272 36-135 (211)
37 3ggd_A SAM-dependent methyltra 99.8 1.6E-18 5.5E-23 147.2 11.2 109 155-273 54-167 (245)
38 2p8j_A S-adenosylmethionine-de 99.8 1.7E-18 5.8E-23 143.3 11.0 111 156-273 22-132 (209)
39 3orh_A Guanidinoacetate N-meth 99.8 3.3E-19 1.1E-23 151.3 6.9 105 156-269 59-170 (236)
40 3pfg_A N-methyltransferase; N, 99.8 3.4E-18 1.2E-22 146.8 13.1 105 157-274 50-156 (263)
41 3bkw_A MLL3908 protein, S-aden 99.8 1.7E-18 5.7E-23 146.5 10.8 104 156-270 42-145 (243)
42 3vc1_A Geranyl diphosphate 2-C 99.8 2.2E-18 7.6E-23 151.9 11.9 111 155-273 115-225 (312)
43 1ve3_A Hypothetical protein PH 99.8 5.7E-18 1.9E-22 141.7 13.5 107 157-271 38-144 (227)
44 1ri5_A MRNA capping enzyme; me 99.8 2.6E-18 9E-23 149.6 11.5 110 156-270 63-175 (298)
45 1zx0_A Guanidinoacetate N-meth 99.8 7.7E-19 2.6E-23 148.7 7.5 107 156-269 59-170 (236)
46 3gu3_A Methyltransferase; alph 99.8 6.9E-18 2.4E-22 146.8 13.4 107 155-271 20-128 (284)
47 3dli_A Methyltransferase; PSI- 99.8 3.2E-18 1.1E-22 145.1 10.9 101 156-271 40-142 (240)
48 2yqz_A Hypothetical protein TT 99.8 1.5E-18 5E-23 148.6 8.9 104 155-268 37-140 (263)
49 3iv6_A Putative Zn-dependent a 99.8 3.1E-18 1.1E-22 147.0 10.4 107 155-270 43-149 (261)
50 3m70_A Tellurite resistance pr 99.7 5.4E-18 1.8E-22 147.4 11.4 107 157-272 120-226 (286)
51 3sm3_A SAM-dependent methyltra 99.7 1.7E-17 5.7E-22 139.4 13.6 114 157-272 30-144 (235)
52 3bxo_A N,N-dimethyltransferase 99.7 4.5E-18 1.5E-22 143.5 9.8 104 157-273 40-145 (239)
53 2p35_A Trans-aconitate 2-methy 99.7 8.4E-18 2.9E-22 143.6 11.0 102 155-270 31-133 (259)
54 4fsd_A Arsenic methyltransfera 99.7 2.7E-18 9.4E-23 155.7 7.8 112 155-272 81-206 (383)
55 3ege_A Putative methyltransfer 99.7 5.5E-18 1.9E-22 145.6 9.2 101 155-271 32-132 (261)
56 3g5t_A Trans-aconitate 3-methy 99.7 1.5E-17 5E-22 145.6 12.1 105 156-268 35-148 (299)
57 2vdw_A Vaccinia virus capping 99.7 3.6E-18 1.2E-22 150.1 7.7 114 157-270 48-170 (302)
58 3dp7_A SAM-dependent methyltra 99.7 3.9E-17 1.3E-21 147.0 14.6 111 157-274 179-292 (363)
59 3thr_A Glycine N-methyltransfe 99.7 6.3E-18 2.1E-22 147.3 9.0 112 156-270 56-176 (293)
60 3g07_A 7SK snRNA methylphospha 99.7 1.2E-17 4.3E-22 145.9 10.6 113 157-269 46-220 (292)
61 2a14_A Indolethylamine N-methy 99.7 3.8E-18 1.3E-22 146.9 7.2 118 155-272 53-200 (263)
62 3ocj_A Putative exported prote 99.7 1.7E-17 5.9E-22 145.7 11.3 112 155-272 116-230 (305)
63 2kw5_A SLR1183 protein; struct 99.7 3.6E-17 1.2E-21 134.7 12.5 105 157-272 30-134 (202)
64 3ccf_A Cyclopropane-fatty-acyl 99.7 2.3E-17 7.8E-22 143.0 11.8 102 155-271 55-156 (279)
65 3mti_A RRNA methylase; SAM-dep 99.7 1.8E-17 6.3E-22 134.7 10.5 121 139-271 9-137 (185)
66 2aot_A HMT, histamine N-methyl 99.7 7.2E-18 2.5E-22 147.3 8.5 110 156-271 51-174 (292)
67 3g2m_A PCZA361.24; SAM-depende 99.7 3.6E-17 1.2E-21 143.1 12.2 110 157-271 82-192 (299)
68 3i53_A O-methyltransferase; CO 99.7 6.9E-17 2.4E-21 143.5 13.9 112 155-274 167-279 (332)
69 2qe6_A Uncharacterized protein 99.7 6.6E-17 2.3E-21 140.1 13.4 108 157-272 77-199 (274)
70 3i9f_A Putative type 11 methyl 99.7 1.1E-17 3.8E-22 134.0 7.9 102 155-273 15-116 (170)
71 1y8c_A S-adenosylmethionine-de 99.7 1.2E-17 4.1E-22 141.2 8.2 103 157-268 37-141 (246)
72 1wzn_A SAM-dependent methyltra 99.7 1.8E-17 6E-22 141.2 8.5 117 139-268 27-144 (252)
73 3cgg_A SAM-dependent methyltra 99.7 1.2E-16 4.2E-21 130.0 12.6 102 157-270 46-148 (195)
74 3d2l_A SAM-dependent methyltra 99.7 4.8E-17 1.6E-21 137.5 9.7 102 157-268 33-136 (243)
75 3gwz_A MMCR; methyltransferase 99.7 3.5E-16 1.2E-20 141.1 15.1 112 155-274 200-312 (369)
76 2r3s_A Uncharacterized protein 99.7 1.2E-16 4E-21 141.9 11.5 111 156-273 164-275 (335)
77 2i62_A Nicotinamide N-methyltr 99.7 2.6E-17 8.9E-22 140.9 7.0 116 156-271 55-200 (265)
78 2g72_A Phenylethanolamine N-me 99.7 3.1E-17 1.1E-21 142.9 7.0 114 157-270 71-216 (289)
79 3p9n_A Possible methyltransfer 99.7 5.9E-17 2E-21 132.4 8.2 109 156-271 43-155 (189)
80 3bkx_A SAM-dependent methyltra 99.7 1.5E-16 5.2E-21 137.1 11.0 111 155-272 41-162 (275)
81 3mcz_A O-methyltransferase; ad 99.7 1.5E-16 5E-21 142.4 11.0 111 158-274 180-292 (352)
82 2avn_A Ubiquinone/menaquinone 99.7 2.4E-16 8.1E-21 135.2 11.6 100 157-270 54-153 (260)
83 1x19_A CRTF-related protein; m 99.7 4E-16 1.4E-20 140.1 13.2 111 155-273 188-299 (359)
84 3e05_A Precorrin-6Y C5,15-meth 99.7 7E-16 2.4E-20 127.4 13.2 105 155-270 38-143 (204)
85 3bgv_A MRNA CAP guanine-N7 met 99.7 1.5E-16 5E-21 140.2 9.5 114 157-270 34-156 (313)
86 3uwp_A Histone-lysine N-methyl 99.7 2.3E-16 7.7E-21 142.2 10.7 115 155-276 171-295 (438)
87 1qzz_A RDMB, aclacinomycin-10- 99.7 4E-16 1.4E-20 140.7 12.4 108 155-270 180-288 (374)
88 3hm2_A Precorrin-6Y C5,15-meth 99.7 3.7E-16 1.3E-20 125.7 10.8 105 155-271 23-129 (178)
89 3eey_A Putative rRNA methylase 99.7 5.9E-16 2E-20 127.0 12.0 110 156-270 21-140 (197)
90 3e8s_A Putative SAM dependent 99.7 4.5E-17 1.5E-21 135.9 4.9 100 156-271 51-154 (227)
91 3htx_A HEN1; HEN1, small RNA m 99.7 6.1E-16 2.1E-20 149.0 13.2 113 156-269 720-834 (950)
92 3fpf_A Mtnas, putative unchara 99.7 2.8E-16 9.6E-21 136.5 9.5 103 155-270 120-223 (298)
93 2ift_A Putative methylase HI07 99.7 1.6E-16 5.6E-21 131.3 7.7 108 157-271 53-165 (201)
94 3cc8_A Putative methyltransfer 99.7 4.3E-16 1.5E-20 130.1 10.3 100 156-271 31-132 (230)
95 1af7_A Chemotaxis receptor met 99.7 5.5E-16 1.9E-20 134.0 11.2 115 157-271 105-256 (274)
96 3dxy_A TRNA (guanine-N(7)-)-me 99.6 1.3E-16 4.6E-21 133.6 6.9 108 157-270 34-151 (218)
97 2fyt_A Protein arginine N-meth 99.6 6.3E-16 2.1E-20 138.0 11.6 104 155-266 62-168 (340)
98 2ip2_A Probable phenazine-spec 99.6 5.4E-16 1.8E-20 137.8 10.7 107 159-273 169-276 (334)
99 3m33_A Uncharacterized protein 99.6 1.4E-16 4.8E-21 133.9 6.5 92 156-267 47-140 (226)
100 1yzh_A TRNA (guanine-N(7)-)-me 99.6 7.4E-16 2.5E-20 128.3 10.7 107 157-269 41-156 (214)
101 3njr_A Precorrin-6Y methylase; 99.6 1.6E-15 5.3E-20 125.7 12.2 103 155-270 53-155 (204)
102 3lbf_A Protein-L-isoaspartate 99.6 6.8E-16 2.3E-20 127.9 10.1 102 155-271 75-176 (210)
103 2fca_A TRNA (guanine-N(7)-)-me 99.6 4.7E-16 1.6E-20 129.7 9.0 107 157-269 38-153 (213)
104 3r0q_C Probable protein argini 99.6 4.6E-16 1.6E-20 140.7 9.7 108 155-269 61-169 (376)
105 1dus_A MJ0882; hypothetical pr 99.6 9.9E-16 3.4E-20 124.5 10.8 109 155-271 50-159 (194)
106 1tw3_A COMT, carminomycin 4-O- 99.6 1E-15 3.5E-20 137.3 11.8 109 155-271 181-290 (360)
107 3q7e_A Protein arginine N-meth 99.6 5.4E-16 1.8E-20 138.9 9.6 107 156-268 65-172 (349)
108 1nt2_A Fibrillarin-like PRE-rR 99.6 1.8E-15 6.2E-20 126.0 12.1 101 155-268 55-160 (210)
109 3dmg_A Probable ribosomal RNA 99.6 5.7E-16 1.9E-20 140.2 9.7 106 157-270 233-341 (381)
110 3lst_A CALO1 methyltransferase 99.6 1.1E-15 3.7E-20 136.7 11.2 109 155-274 182-291 (348)
111 3grz_A L11 mtase, ribosomal pr 99.6 6.9E-16 2.4E-20 127.4 8.9 102 157-271 60-161 (205)
112 3fzg_A 16S rRNA methylase; met 99.6 9.3E-17 3.2E-21 130.2 3.5 120 134-269 32-152 (200)
113 2y1w_A Histone-arginine methyl 99.6 7.9E-16 2.7E-20 137.8 9.9 106 156-268 49-154 (348)
114 3gdh_A Trimethylguanosine synt 99.6 7.2E-18 2.5E-22 142.9 -4.0 102 157-267 78-179 (241)
115 1vlm_A SAM-dependent methyltra 99.6 7.6E-16 2.6E-20 128.6 8.3 94 158-271 48-141 (219)
116 4e2x_A TCAB9; kijanose, tetron 99.6 7.9E-17 2.7E-21 147.4 2.5 105 155-270 105-209 (416)
117 4df3_A Fibrillarin-like rRNA/T 99.6 4.2E-15 1.4E-19 125.2 12.7 109 149-269 69-182 (233)
118 3lpm_A Putative methyltransfer 99.6 6.6E-16 2.3E-20 132.5 7.8 110 155-269 46-176 (259)
119 4dcm_A Ribosomal RNA large sub 99.6 1.9E-15 6.5E-20 136.5 11.2 113 155-271 220-336 (375)
120 3evz_A Methyltransferase; NYSG 99.6 1.7E-15 5.8E-20 127.2 10.2 106 156-268 54-178 (230)
121 2pjd_A Ribosomal RNA small sub 99.6 1.1E-15 3.8E-20 136.5 9.3 106 157-271 196-305 (343)
122 2ozv_A Hypothetical protein AT 99.6 3.8E-15 1.3E-19 128.0 12.2 110 155-269 34-170 (260)
123 2esr_A Methyltransferase; stru 99.6 9.2E-16 3.2E-20 123.7 7.6 107 157-271 31-140 (177)
124 1xdz_A Methyltransferase GIDB; 99.6 6.5E-16 2.2E-20 131.0 6.7 102 156-269 69-174 (240)
125 2fpo_A Methylase YHHF; structu 99.6 9.9E-16 3.4E-20 126.7 7.6 105 157-270 54-161 (202)
126 1vbf_A 231AA long hypothetical 99.6 4.9E-15 1.7E-19 124.5 11.8 100 155-271 68-167 (231)
127 1fbn_A MJ fibrillarin homologu 99.6 5.2E-15 1.8E-19 124.6 11.9 100 155-268 72-177 (230)
128 3reo_A (ISO)eugenol O-methyltr 99.6 2.8E-15 9.6E-20 135.1 10.9 104 155-274 201-305 (368)
129 3p9c_A Caffeic acid O-methyltr 99.6 3.2E-15 1.1E-19 134.6 10.9 104 155-274 199-303 (364)
130 3ckk_A TRNA (guanine-N(7)-)-me 99.6 1.8E-15 6.1E-20 128.2 8.4 113 156-268 45-167 (235)
131 4a6d_A Hydroxyindole O-methylt 99.6 1.2E-14 4.3E-19 130.2 14.1 110 155-273 177-287 (353)
132 1o9g_A RRNA methyltransferase; 99.6 1.9E-15 6.4E-20 128.9 8.3 111 156-271 50-216 (250)
133 2fhp_A Methylase, putative; al 99.6 1.5E-15 5.2E-20 123.1 7.2 108 156-271 43-156 (187)
134 2zfu_A Nucleomethylin, cerebra 99.6 8.4E-16 2.9E-20 127.8 5.7 88 156-271 66-153 (215)
135 1g6q_1 HnRNP arginine N-methyl 99.6 3.2E-15 1.1E-19 132.7 9.8 105 157-267 38-143 (328)
136 1fp1_D Isoliquiritigenin 2'-O- 99.6 3.1E-15 1E-19 135.0 9.0 102 156-273 208-310 (372)
137 3mq2_A 16S rRNA methyltransfer 99.6 1.4E-15 4.9E-20 126.7 6.3 106 155-269 25-140 (218)
138 2frn_A Hypothetical protein PH 99.6 2.5E-15 8.6E-20 130.4 8.0 104 157-272 125-228 (278)
139 3b3j_A Histone-arginine methyl 99.6 3.6E-15 1.2E-19 138.7 9.5 105 156-267 157-261 (480)
140 3u81_A Catechol O-methyltransf 99.6 2.2E-15 7.5E-20 126.1 7.1 107 157-271 58-172 (221)
141 1dl5_A Protein-L-isoaspartate 99.6 5.3E-15 1.8E-19 130.7 9.9 102 155-270 73-176 (317)
142 1u2z_A Histone-lysine N-methyl 99.6 1.1E-14 3.8E-19 133.1 11.9 114 155-275 240-365 (433)
143 2yxe_A Protein-L-isoaspartate 99.6 8E-15 2.7E-19 121.8 9.9 102 155-270 75-178 (215)
144 3ntv_A MW1564 protein; rossman 99.6 2.6E-15 8.9E-20 126.7 7.0 103 157-269 71-176 (232)
145 1jsx_A Glucose-inhibited divis 99.6 7.7E-15 2.6E-19 121.1 9.7 101 157-270 65-166 (207)
146 3dr5_A Putative O-methyltransf 99.6 3.6E-15 1.2E-19 125.2 7.6 104 157-270 56-164 (221)
147 1fp2_A Isoflavone O-methyltran 99.6 5.6E-15 1.9E-19 132.3 9.3 102 156-273 187-292 (352)
148 3g89_A Ribosomal RNA small sub 99.6 6.1E-15 2.1E-19 126.0 9.1 103 156-270 79-185 (249)
149 1l3i_A Precorrin-6Y methyltran 99.6 3.6E-15 1.2E-19 120.9 7.2 105 155-270 31-135 (192)
150 3p2e_A 16S rRNA methylase; met 99.6 3.4E-15 1.2E-19 125.6 7.1 107 156-268 23-138 (225)
151 3giw_A Protein of unknown func 99.6 6.2E-15 2.1E-19 126.6 8.8 127 137-272 61-203 (277)
152 4azs_A Methyltransferase WBDD; 99.6 1.2E-15 4.1E-20 145.0 4.7 109 157-272 66-176 (569)
153 3bzb_A Uncharacterized protein 99.6 2.4E-14 8.2E-19 124.4 12.2 110 156-268 78-204 (281)
154 3tfw_A Putative O-methyltransf 99.6 1E-14 3.5E-19 124.4 9.6 105 157-271 63-172 (248)
155 4hc4_A Protein arginine N-meth 99.6 9.1E-15 3.1E-19 131.5 9.3 104 157-267 83-187 (376)
156 3q87_B N6 adenine specific DNA 99.5 7.4E-15 2.5E-19 118.1 7.6 96 157-271 23-125 (170)
157 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.8E-14 6.1E-19 121.4 9.9 102 155-268 75-181 (233)
158 1yb2_A Hypothetical protein TA 99.5 2.3E-14 7.9E-19 123.9 10.4 103 155-271 108-213 (275)
159 3sso_A Methyltransferase; macr 99.5 2.8E-15 9.6E-20 134.7 4.7 113 136-271 200-326 (419)
160 2yxd_A Probable cobalt-precorr 99.5 1.3E-14 4.5E-19 116.8 8.2 100 155-270 33-132 (183)
161 2gpy_A O-methyltransferase; st 99.5 1.4E-14 4.6E-19 122.1 8.3 103 157-269 54-160 (233)
162 4dzr_A Protein-(glutamine-N5) 99.5 1.7E-15 5.8E-20 125.2 2.6 106 156-269 29-164 (215)
163 2vdv_E TRNA (guanine-N(7)-)-me 99.5 2.3E-14 7.8E-19 122.0 9.5 113 156-268 48-172 (246)
164 1p91_A Ribosomal RNA large sub 99.5 2.7E-14 9.3E-19 122.7 9.9 97 156-272 84-181 (269)
165 1ws6_A Methyltransferase; stru 99.5 4.8E-15 1.6E-19 118.3 4.6 103 157-271 41-149 (171)
166 3mb5_A SAM-dependent methyltra 99.5 2E-14 6.8E-19 122.6 8.6 104 155-271 91-196 (255)
167 2nxc_A L11 mtase, ribosomal pr 99.5 8E-15 2.7E-19 125.5 6.1 101 157-271 120-220 (254)
168 3adn_A Spermidine synthase; am 99.5 2.8E-14 9.7E-19 124.7 9.6 113 156-269 82-198 (294)
169 2b3t_A Protein methyltransfera 99.5 2.6E-14 8.9E-19 123.7 9.3 106 157-269 109-238 (276)
170 3duw_A OMT, O-methyltransferas 99.5 1.9E-14 6.4E-19 120.3 7.9 105 157-271 58-169 (223)
171 1g8a_A Fibrillarin-like PRE-rR 99.5 1.2E-13 4E-18 115.8 12.8 102 155-268 71-177 (227)
172 1jg1_A PIMT;, protein-L-isoasp 99.5 4E-14 1.4E-18 119.5 9.9 102 155-271 89-191 (235)
173 3tr6_A O-methyltransferase; ce 99.5 1E-14 3.4E-19 122.1 6.2 105 157-271 64-176 (225)
174 3c3p_A Methyltransferase; NP_9 99.5 1.5E-14 5E-19 120.0 7.0 102 157-269 56-160 (210)
175 3r3h_A O-methyltransferase, SA 99.5 2.6E-15 8.9E-20 127.7 2.5 105 157-271 60-172 (242)
176 3id6_C Fibrillarin-like rRNA/T 99.5 9.6E-14 3.3E-18 117.0 11.1 105 153-269 72-181 (232)
177 3hp7_A Hemolysin, putative; st 99.5 1.7E-14 5.8E-19 125.3 6.5 96 157-268 85-184 (291)
178 2pwy_A TRNA (adenine-N(1)-)-me 99.5 4.6E-14 1.6E-18 120.3 9.0 104 155-271 94-200 (258)
179 1zg3_A Isoflavanone 4'-O-methy 99.5 3.7E-14 1.3E-18 127.2 8.8 101 157-273 193-297 (358)
180 3bwc_A Spermidine synthase; SA 99.5 2.4E-14 8.2E-19 125.8 7.2 113 156-270 94-211 (304)
181 3gjy_A Spermidine synthase; AP 99.5 5.6E-14 1.9E-18 123.4 9.1 106 158-269 90-200 (317)
182 1ej0_A FTSJ; methyltransferase 99.5 2.4E-14 8.2E-19 114.3 6.3 101 155-272 20-139 (180)
183 2ld4_A Anamorsin; methyltransf 99.5 8.6E-15 2.9E-19 118.0 3.6 91 154-271 9-103 (176)
184 1sui_A Caffeoyl-COA O-methyltr 99.5 2.9E-14 9.9E-19 121.6 7.0 103 157-269 79-190 (247)
185 2pbf_A Protein-L-isoaspartate 99.5 3.6E-14 1.2E-18 118.9 7.3 106 155-269 78-193 (227)
186 2yvl_A TRMI protein, hypotheti 99.5 1.7E-13 5.7E-18 116.1 11.0 103 155-270 89-191 (248)
187 2hnk_A SAM-dependent O-methylt 99.5 1.9E-14 6.6E-19 121.8 5.1 103 157-269 60-181 (239)
188 3a27_A TYW2, uncharacterized p 99.5 3.8E-14 1.3E-18 122.6 7.0 105 155-272 117-222 (272)
189 3opn_A Putative hemolysin; str 99.5 1.8E-14 6E-19 121.8 4.7 100 156-268 36-136 (232)
190 1i1n_A Protein-L-isoaspartate 99.5 9.6E-14 3.3E-18 116.2 8.8 107 155-270 75-183 (226)
191 1nv8_A HEMK protein; class I a 99.5 2.4E-13 8.4E-18 118.2 11.6 105 157-268 123-248 (284)
192 3c3y_A Pfomt, O-methyltransfer 99.5 1.2E-13 4E-18 117.0 8.9 103 157-269 70-181 (237)
193 3tma_A Methyltransferase; thum 99.5 2.1E-13 7.3E-18 122.1 11.1 110 155-270 201-318 (354)
194 1o54_A SAM-dependent O-methylt 99.5 1.1E-13 3.9E-18 119.6 8.9 104 155-271 110-215 (277)
195 1i9g_A Hypothetical protein RV 99.5 8.3E-14 2.8E-18 120.3 8.0 105 155-271 97-205 (280)
196 3cbg_A O-methyltransferase; cy 99.5 7.6E-14 2.6E-18 117.7 7.5 104 157-270 72-183 (232)
197 1r18_A Protein-L-isoaspartate( 99.5 3.3E-14 1.1E-18 119.4 5.1 107 155-270 82-195 (227)
198 2igt_A SAM dependent methyltra 99.5 4.9E-14 1.7E-18 125.3 6.5 110 157-271 153-274 (332)
199 1ne2_A Hypothetical protein TA 99.5 2E-13 6.7E-18 112.2 9.6 96 156-268 50-145 (200)
200 2plw_A Ribosomal RNA methyltra 99.5 1.6E-13 5.5E-18 112.6 9.0 98 156-270 21-155 (201)
201 2h00_A Methyltransferase 10 do 99.5 9E-15 3.1E-19 124.8 1.4 107 157-268 65-191 (254)
202 3lec_A NADB-rossmann superfami 99.5 1.8E-13 6E-18 114.9 9.0 107 156-271 20-127 (230)
203 2oxt_A Nucleoside-2'-O-methylt 99.5 3.8E-14 1.3E-18 122.1 5.0 107 155-271 72-187 (265)
204 2bm8_A Cephalosporin hydroxyla 99.4 6.4E-14 2.2E-18 118.6 6.1 97 157-269 81-187 (236)
205 1xj5_A Spermidine synthase 1; 99.4 1.1E-13 3.7E-18 123.0 7.8 109 156-268 119-234 (334)
206 3kr9_A SAM-dependent methyltra 99.4 2.2E-13 7.4E-18 114.1 8.7 106 156-270 14-120 (225)
207 1ixk_A Methyltransferase; open 99.4 1.6E-13 5.5E-18 121.1 8.3 110 155-270 116-247 (315)
208 1mjf_A Spermidine synthase; sp 99.4 6.6E-14 2.3E-18 121.6 5.5 111 157-268 75-192 (281)
209 3gnl_A Uncharacterized protein 99.4 2.7E-13 9.4E-18 114.7 9.0 107 156-271 20-127 (244)
210 2avd_A Catechol-O-methyltransf 99.4 7.9E-14 2.7E-18 116.9 5.4 104 157-270 69-180 (229)
211 2i7c_A Spermidine synthase; tr 99.4 1.8E-13 6E-18 119.1 7.3 112 156-269 77-192 (283)
212 2wa2_A Non-structural protein 99.4 1.2E-13 3.9E-18 119.7 5.8 107 155-271 80-195 (276)
213 1iy9_A Spermidine synthase; ro 99.4 1.6E-13 5.6E-18 118.8 6.6 108 157-268 75-188 (275)
214 1uir_A Polyamine aminopropyltr 99.4 1.4E-13 4.9E-18 121.4 6.1 109 156-268 76-194 (314)
215 2b2c_A Spermidine synthase; be 99.4 1.6E-13 5.6E-18 120.9 6.4 111 157-269 108-222 (314)
216 2o07_A Spermidine synthase; st 99.4 1.4E-13 4.9E-18 120.8 5.8 110 156-269 94-209 (304)
217 2b25_A Hypothetical protein; s 99.4 8.7E-13 3E-17 117.2 10.7 109 155-270 103-220 (336)
218 1wy7_A Hypothetical protein PH 99.4 1.2E-12 4.2E-17 107.8 10.8 100 156-267 48-147 (207)
219 2as0_A Hypothetical protein PH 99.4 2.4E-13 8.1E-18 123.7 6.8 110 157-271 217-337 (396)
220 2qm3_A Predicted methyltransfe 99.4 6.9E-13 2.3E-17 119.7 9.6 99 157-265 172-273 (373)
221 2b78_A Hypothetical protein SM 99.4 1.1E-13 3.8E-18 125.4 4.4 111 157-272 212-334 (385)
222 2pt6_A Spermidine synthase; tr 99.4 2.6E-13 8.8E-18 120.1 6.6 111 157-269 116-230 (321)
223 2cmg_A Spermidine synthase; tr 99.4 3E-13 1E-17 116.2 6.8 98 157-269 72-171 (262)
224 3frh_A 16S rRNA methylase; met 99.4 7.7E-13 2.6E-17 111.0 9.0 118 134-269 89-206 (253)
225 3ajd_A Putative methyltransfer 99.4 3.1E-13 1E-17 116.9 6.6 110 155-270 81-212 (274)
226 3lcv_B Sisomicin-gentamicin re 99.4 3.4E-13 1.2E-17 114.2 6.0 123 133-270 114-237 (281)
227 1inl_A Spermidine synthase; be 99.4 3E-13 1E-17 118.3 5.5 108 157-268 90-204 (296)
228 3k6r_A Putative transferase PH 99.4 3.8E-13 1.3E-17 116.3 6.1 105 156-272 124-228 (278)
229 2yxl_A PH0851 protein, 450AA l 99.4 4.2E-12 1.4E-16 117.3 12.9 110 155-270 257-390 (450)
230 3v97_A Ribosomal RNA large sub 99.4 3.8E-13 1.3E-17 130.5 6.1 111 157-271 539-659 (703)
231 1zq9_A Probable dimethyladenos 99.4 1.7E-12 5.8E-17 112.9 9.5 103 155-266 26-144 (285)
232 1wxx_A TT1595, hypothetical pr 99.3 4.9E-13 1.7E-17 121.0 5.4 108 157-271 209-327 (382)
233 2nyu_A Putative ribosomal RNA 99.3 1.3E-12 4.3E-17 106.7 6.7 99 156-271 21-147 (196)
234 3c0k_A UPF0064 protein YCCW; P 99.3 9.9E-13 3.4E-17 119.6 6.7 112 157-272 220-342 (396)
235 2yx1_A Hypothetical protein MJ 99.3 2E-12 6.8E-17 115.1 7.4 100 157-272 195-294 (336)
236 3tm4_A TRNA (guanine N2-)-meth 99.3 3.3E-12 1.1E-16 115.2 8.8 107 156-268 216-329 (373)
237 4dmg_A Putative uncharacterize 99.3 2E-12 6.7E-17 117.3 7.0 108 157-272 214-329 (393)
238 3dou_A Ribosomal RNA large sub 99.3 3.2E-12 1.1E-16 104.7 7.1 97 156-270 24-140 (191)
239 2frx_A Hypothetical protein YE 99.3 1.1E-11 3.7E-16 115.2 10.7 108 157-270 117-247 (479)
240 2f8l_A Hypothetical protein LM 99.3 5.7E-12 1.9E-16 112.4 8.0 106 156-269 129-256 (344)
241 2p41_A Type II methyltransfera 99.3 1.8E-12 6.2E-17 113.7 4.7 104 155-270 80-192 (305)
242 1sqg_A SUN protein, FMU protei 99.3 9.7E-12 3.3E-16 114.2 9.6 109 155-270 244-375 (429)
243 2jjq_A Uncharacterized RNA met 99.2 2.7E-11 9.1E-16 111.0 10.5 99 157-270 290-388 (425)
244 3m6w_A RRNA methylase; rRNA me 99.2 5.4E-12 1.8E-16 116.4 5.8 108 155-269 99-229 (464)
245 1uwv_A 23S rRNA (uracil-5-)-me 99.2 4E-11 1.4E-15 110.2 9.8 103 155-270 284-390 (433)
246 1qam_A ERMC' methyltransferase 99.2 7.4E-11 2.5E-15 100.2 9.9 75 155-239 28-103 (244)
247 2h1r_A Dimethyladenosine trans 99.2 3.3E-11 1.1E-15 105.4 7.8 99 155-263 40-153 (299)
248 3m4x_A NOL1/NOP2/SUN family pr 99.2 1.7E-11 5.7E-16 112.9 5.7 109 155-269 103-234 (456)
249 2qfm_A Spermine synthase; sper 99.1 4.4E-11 1.5E-15 106.3 6.7 114 156-269 187-314 (364)
250 3gru_A Dimethyladenosine trans 99.1 1.3E-10 4.6E-15 101.2 9.4 78 155-241 48-125 (295)
251 2okc_A Type I restriction enzy 99.1 1.2E-10 4E-15 107.5 8.5 110 155-269 169-307 (445)
252 1yub_A Ermam, rRNA methyltrans 99.1 2.1E-12 7.2E-17 109.8 -3.0 103 155-268 27-144 (245)
253 2ih2_A Modification methylase 99.1 1.3E-10 4.3E-15 106.1 7.2 97 157-269 39-164 (421)
254 3ldg_A Putative uncharacterize 99.1 7.4E-10 2.5E-14 100.0 12.1 109 155-269 192-343 (384)
255 3k0b_A Predicted N6-adenine-sp 99.1 3.3E-10 1.1E-14 102.7 9.5 109 155-269 199-350 (393)
256 3ldu_A Putative methylase; str 99.1 3.9E-10 1.3E-14 102.0 9.8 109 155-269 193-344 (385)
257 2xyq_A Putative 2'-O-methyl tr 99.0 3.9E-10 1.3E-14 97.9 8.4 94 155-270 61-172 (290)
258 3fut_A Dimethyladenosine trans 99.0 1.2E-09 4E-14 94.1 10.0 99 155-268 45-144 (271)
259 3tqs_A Ribosomal RNA small sub 99.0 9.1E-10 3.1E-14 94.0 8.1 76 155-240 27-106 (255)
260 2b9e_A NOL1/NOP2/SUN domain fa 99.0 2.5E-09 8.4E-14 93.9 10.3 108 155-269 100-234 (309)
261 2r6z_A UPF0341 protein in RSP 99.0 2.2E-10 7.5E-15 98.1 3.2 107 156-270 82-217 (258)
262 3axs_A Probable N(2),N(2)-dime 99.0 4.2E-10 1.4E-14 101.7 5.0 102 157-269 52-158 (392)
263 3bt7_A TRNA (uracil-5-)-methyl 99.0 1.2E-09 4.1E-14 98.2 8.0 97 158-269 214-326 (369)
264 2dul_A N(2),N(2)-dimethylguano 98.9 3.5E-10 1.2E-14 102.0 4.3 100 157-268 47-163 (378)
265 4gqb_A Protein arginine N-meth 98.9 2E-09 7E-14 102.3 8.7 103 157-266 357-464 (637)
266 3ftd_A Dimethyladenosine trans 98.9 4.3E-09 1.5E-13 89.5 8.1 75 155-240 29-105 (249)
267 3evf_A RNA-directed RNA polyme 98.9 2.1E-09 7.2E-14 91.5 5.7 106 155-268 72-183 (277)
268 3o4f_A Spermidine synthase; am 98.9 1.1E-08 3.7E-13 88.6 10.0 113 155-268 81-197 (294)
269 2efj_A 3,7-dimethylxanthine me 98.8 2.4E-08 8.2E-13 89.7 10.6 105 158-270 53-226 (384)
270 2ar0_A M.ecoki, type I restric 98.8 9.3E-09 3.2E-13 96.9 8.3 114 155-269 167-312 (541)
271 3cvo_A Methyltransferase-like 98.8 4.8E-08 1.6E-12 80.1 11.4 102 157-271 30-155 (202)
272 3b5i_A S-adenosyl-L-methionine 98.8 3.2E-08 1.1E-12 88.7 10.7 113 157-269 52-225 (374)
273 3v97_A Ribosomal RNA large sub 98.8 2.6E-08 8.8E-13 96.6 10.8 109 155-268 188-346 (703)
274 1qyr_A KSGA, high level kasuga 98.8 5.8E-09 2E-13 88.9 5.1 75 155-240 19-100 (252)
275 1m6y_A S-adenosyl-methyltransf 98.7 1.3E-08 4.6E-13 88.8 7.0 77 155-238 24-106 (301)
276 3ua3_A Protein arginine N-meth 98.7 5.3E-09 1.8E-13 99.6 4.1 104 157-266 409-531 (745)
277 3uzu_A Ribosomal RNA small sub 98.7 1.7E-08 5.9E-13 87.2 6.9 76 155-240 40-124 (279)
278 3gcz_A Polyprotein; flavivirus 98.6 7.4E-09 2.5E-13 88.3 2.4 105 155-268 88-200 (282)
279 3ll7_A Putative methyltransfer 98.6 7.7E-09 2.6E-13 93.7 2.4 75 157-238 93-171 (410)
280 1m6e_X S-adenosyl-L-methionnin 98.6 1.1E-07 3.8E-12 84.7 7.7 108 156-268 50-208 (359)
281 3c6k_A Spermine synthase; sper 98.6 8.7E-08 3E-12 85.5 7.0 114 156-269 204-331 (381)
282 2oyr_A UPF0341 protein YHIQ; a 98.6 2.3E-08 7.8E-13 85.4 2.9 83 159-242 90-176 (258)
283 3khk_A Type I restriction-modi 98.5 9.7E-08 3.3E-12 89.9 7.2 105 159-268 246-394 (544)
284 3lkd_A Type I restriction-modi 98.5 8.4E-07 2.9E-11 83.4 11.3 108 156-268 220-357 (542)
285 3eld_A Methyltransferase; flav 98.5 2.7E-07 9.4E-12 79.1 7.2 105 155-268 79-190 (300)
286 3s1s_A Restriction endonucleas 98.4 6.5E-07 2.2E-11 86.7 9.9 110 157-268 321-464 (878)
287 2qy6_A UPF0209 protein YFCK; s 98.4 2.4E-07 8.3E-12 79.0 4.4 112 156-267 59-211 (257)
288 2k4m_A TR8_protein, UPF0146 pr 98.3 3.6E-07 1.2E-11 70.3 4.5 83 157-268 35-120 (153)
289 2wk1_A NOVP; transferase, O-me 98.3 7.2E-07 2.4E-11 76.9 5.7 106 156-269 105-244 (282)
290 4fzv_A Putative methyltransfer 98.3 2.7E-06 9.3E-11 75.8 9.5 115 155-269 146-284 (359)
291 4auk_A Ribosomal RNA large sub 98.2 8E-06 2.7E-10 72.6 10.6 98 155-269 209-306 (375)
292 2px2_A Genome polyprotein [con 98.1 4.5E-06 1.5E-10 70.1 6.1 103 155-268 71-182 (269)
293 3lkz_A Non-structural protein 98.1 1.4E-05 4.7E-10 68.4 8.8 106 155-270 92-205 (321)
294 1wg8_A Predicted S-adenosylmet 98.1 7.8E-06 2.7E-10 70.0 7.2 72 155-237 20-96 (285)
295 2vz8_A Fatty acid synthase; tr 97.9 1.1E-06 3.9E-11 95.5 -0.4 104 156-270 1239-1349(2512)
296 3p8z_A Mtase, non-structural p 97.9 0.00011 3.7E-09 61.0 10.3 107 155-271 76-188 (267)
297 3ufb_A Type I restriction-modi 97.8 0.00011 3.6E-09 69.0 10.3 108 155-268 215-361 (530)
298 1rjd_A PPM1P, carboxy methyl t 97.6 0.00021 7.3E-09 63.0 9.3 115 157-273 97-236 (334)
299 3g7u_A Cytosine-specific methy 97.6 0.00023 7.8E-09 63.8 9.3 102 159-273 3-122 (376)
300 2zig_A TTHA0409, putative modi 97.6 0.00011 3.7E-09 63.7 6.8 58 139-202 222-279 (297)
301 1g55_A DNA cytosine methyltran 97.3 0.00024 8.2E-09 62.9 5.1 103 158-273 2-122 (343)
302 2oo3_A Protein involved in cat 97.0 0.0005 1.7E-08 58.8 4.5 101 158-269 92-198 (283)
303 2c7p_A Modification methylase 97.0 0.0019 6.5E-08 56.7 7.9 100 158-272 11-122 (327)
304 1g60_A Adenine-specific methyl 96.9 0.0015 5E-08 55.4 6.7 59 139-203 199-257 (260)
305 1i4w_A Mitochondrial replicati 96.9 0.0016 5.5E-08 57.7 7.0 59 157-224 58-117 (353)
306 3tka_A Ribosomal RNA small sub 96.8 0.0018 6.2E-08 56.7 6.4 73 155-237 55-135 (347)
307 2uyo_A Hypothetical protein ML 96.8 0.0095 3.3E-07 51.8 10.6 105 159-268 104-217 (310)
308 3qv2_A 5-cytosine DNA methyltr 96.7 0.0032 1.1E-07 55.3 7.1 105 157-273 9-133 (327)
309 3r24_A NSP16, 2'-O-methyl tran 96.6 0.0022 7.4E-08 54.9 5.2 93 155-268 107-216 (344)
310 2qrv_A DNA (cytosine-5)-methyl 96.4 0.013 4.4E-07 50.6 9.1 108 155-273 13-143 (295)
311 4h0n_A DNMT2; SAH binding, tra 96.4 0.0048 1.6E-07 54.3 6.3 102 159-273 4-122 (333)
312 3ubt_Y Modification methylase 96.3 0.012 4.2E-07 51.2 8.4 100 159-272 1-112 (331)
313 1f8f_A Benzyl alcohol dehydrog 96.2 0.022 7.4E-07 50.5 9.2 96 155-270 188-290 (371)
314 1pqw_A Polyketide synthase; ro 96.1 0.018 6.1E-07 46.1 7.9 92 155-269 36-137 (198)
315 3tos_A CALS11; methyltransfera 96.0 0.073 2.5E-06 44.9 11.4 106 157-270 69-218 (257)
316 3me5_A Cytosine-specific methy 96.0 0.011 3.8E-07 54.5 6.7 60 157-224 87-146 (482)
317 4ej6_A Putative zinc-binding d 96.0 0.048 1.7E-06 48.3 10.5 99 155-270 180-285 (370)
318 3s2e_A Zinc-containing alcohol 95.8 0.026 8.9E-07 49.3 8.0 93 155-269 164-263 (340)
319 2dph_A Formaldehyde dismutase; 95.5 0.05 1.7E-06 48.7 9.0 102 155-269 183-299 (398)
320 1pl8_A Human sorbitol dehydrog 95.5 0.095 3.3E-06 46.0 10.6 98 155-269 169-273 (356)
321 3fpc_A NADP-dependent alcohol 95.5 0.058 2E-06 47.3 9.1 99 155-270 164-267 (352)
322 1v3u_A Leukotriene B4 12- hydr 95.5 0.057 1.9E-06 47.0 9.0 92 155-269 143-244 (333)
323 1e3j_A NADP(H)-dependent ketos 95.5 0.072 2.5E-06 46.7 9.6 95 155-269 166-271 (352)
324 1zkd_A DUF185; NESG, RPR58, st 95.3 0.059 2E-06 48.2 8.5 77 156-244 79-163 (387)
325 2py6_A Methyltransferase FKBM; 95.2 0.031 1E-06 50.5 6.5 48 155-202 224-274 (409)
326 3m6i_A L-arabinitol 4-dehydrog 95.2 0.12 4E-06 45.6 10.0 97 155-269 177-283 (363)
327 3two_A Mannitol dehydrogenase; 95.2 0.027 9.2E-07 49.4 5.9 91 155-269 174-265 (348)
328 3gms_A Putative NADPH:quinone 95.2 0.076 2.6E-06 46.3 8.7 95 155-270 142-244 (340)
329 4b7c_A Probable oxidoreductase 95.1 0.067 2.3E-06 46.5 8.1 93 155-269 147-248 (336)
330 3uog_A Alcohol dehydrogenase; 95.0 0.095 3.3E-06 46.2 9.0 95 155-270 187-288 (363)
331 2j3h_A NADP-dependent oxidored 94.9 0.08 2.7E-06 46.2 8.0 93 155-269 153-255 (345)
332 3vyw_A MNMC2; tRNA wobble urid 94.8 0.054 1.8E-06 46.8 6.6 107 156-266 95-223 (308)
333 3ip1_A Alcohol dehydrogenase, 94.8 0.27 9.2E-06 44.0 11.5 98 155-269 211-318 (404)
334 3qwb_A Probable quinone oxidor 94.7 0.13 4.3E-06 44.8 8.8 94 155-269 146-247 (334)
335 1rjw_A ADH-HT, alcohol dehydro 94.7 0.11 3.6E-06 45.4 8.3 93 155-269 162-261 (339)
336 1kol_A Formaldehyde dehydrogen 94.7 0.11 3.8E-06 46.3 8.6 100 155-269 183-300 (398)
337 3jyn_A Quinone oxidoreductase; 94.6 0.11 3.9E-06 44.9 8.3 95 155-270 138-240 (325)
338 1yb5_A Quinone oxidoreductase; 94.5 0.16 5.3E-06 44.6 9.1 92 155-269 168-269 (351)
339 2d8a_A PH0655, probable L-thre 94.5 0.25 8.5E-06 43.1 10.4 91 157-269 167-267 (348)
340 1jvb_A NAD(H)-dependent alcoho 94.5 0.09 3.1E-06 46.0 7.5 95 155-269 168-271 (347)
341 3jv7_A ADH-A; dehydrogenase, n 94.5 0.065 2.2E-06 46.8 6.4 95 155-270 169-271 (345)
342 4dvj_A Putative zinc-dependent 94.4 0.23 7.9E-06 43.8 10.0 94 157-269 171-270 (363)
343 1uuf_A YAHK, zinc-type alcohol 94.4 0.061 2.1E-06 47.7 6.1 95 155-269 192-288 (369)
344 2eih_A Alcohol dehydrogenase; 94.3 0.16 5.6E-06 44.2 8.7 93 155-270 164-266 (343)
345 1qor_A Quinone oxidoreductase; 94.3 0.15 5E-06 44.2 8.2 93 155-270 138-240 (327)
346 2h6e_A ADH-4, D-arabinose 1-de 94.2 0.018 6.3E-07 50.4 2.3 95 157-269 170-269 (344)
347 3nx4_A Putative oxidoreductase 94.1 0.1 3.5E-06 45.1 6.9 90 160-269 149-241 (324)
348 1cdo_A Alcohol dehydrogenase; 94.1 0.12 4.1E-06 45.7 7.4 95 155-269 190-294 (374)
349 2j8z_A Quinone oxidoreductase; 94.1 0.21 7.2E-06 43.8 8.9 93 155-270 160-262 (354)
350 2hcy_A Alcohol dehydrogenase 1 94.1 0.1 3.5E-06 45.6 6.8 94 155-270 167-270 (347)
351 3uko_A Alcohol dehydrogenase c 93.9 0.19 6.4E-06 44.5 8.3 96 155-270 191-296 (378)
352 2fzw_A Alcohol dehydrogenase c 93.9 0.17 5.8E-06 44.7 7.9 96 155-269 188-292 (373)
353 1boo_A Protein (N-4 cytosine-s 93.8 0.11 3.8E-06 45.2 6.4 59 139-203 239-297 (323)
354 4eye_A Probable oxidoreductase 93.8 0.14 4.9E-06 44.7 7.2 93 155-269 157-257 (342)
355 1p0f_A NADP-dependent alcohol 93.8 0.13 4.4E-06 45.5 6.9 96 155-269 189-293 (373)
356 1e3i_A Alcohol dehydrogenase, 93.8 0.34 1.2E-05 42.8 9.7 96 155-269 193-297 (376)
357 2jhf_A Alcohol dehydrogenase E 93.7 0.24 8.2E-06 43.7 8.7 95 155-269 189-293 (374)
358 2c0c_A Zinc binding alcohol de 93.7 0.16 5.5E-06 44.7 7.4 94 155-269 161-261 (362)
359 1wly_A CAAR, 2-haloacrylate re 93.6 0.25 8.5E-06 42.8 8.3 93 155-270 143-245 (333)
360 3goh_A Alcohol dehydrogenase, 93.5 0.1 3.5E-06 44.9 5.8 88 155-268 140-228 (315)
361 3fwz_A Inner membrane protein 93.5 0.61 2.1E-05 34.8 9.5 92 158-268 7-104 (140)
362 3swr_A DNA (cytosine-5)-methyl 93.5 0.14 4.9E-06 51.2 7.3 47 156-202 538-585 (1002)
363 2dq4_A L-threonine 3-dehydroge 93.4 0.08 2.7E-06 46.2 4.9 90 157-269 164-262 (343)
364 4dup_A Quinone oxidoreductase; 93.4 0.16 5.6E-06 44.5 6.9 94 155-269 165-265 (353)
365 3krt_A Crotonyl COA reductase; 93.3 0.39 1.3E-05 43.7 9.5 97 155-269 226-344 (456)
366 2zb4_A Prostaglandin reductase 93.2 0.37 1.3E-05 42.1 8.9 93 155-269 156-260 (357)
367 2zig_A TTHA0409, putative modi 93.0 0.06 2.1E-06 46.2 3.4 56 213-268 21-96 (297)
368 4ft4_B DNA (cytosine-5)-methyl 92.9 0.12 4.2E-06 50.5 5.8 47 156-202 210-262 (784)
369 1eg2_A Modification methylase 92.9 0.18 6E-06 43.9 6.2 61 137-203 227-290 (319)
370 1xa0_A Putative NADPH dependen 92.9 0.16 5.4E-06 43.9 6.0 96 156-269 147-246 (328)
371 2b5w_A Glucose dehydrogenase; 92.7 0.2 6.9E-06 43.9 6.5 89 159-270 174-274 (357)
372 1vj0_A Alcohol dehydrogenase, 92.5 0.44 1.5E-05 42.2 8.5 99 155-270 193-299 (380)
373 4eez_A Alcohol dehydrogenase 1 92.4 0.85 2.9E-05 39.5 10.1 98 155-269 161-263 (348)
374 4a2c_A Galactitol-1-phosphate 92.0 1.3 4.4E-05 38.3 10.8 95 155-271 158-262 (346)
375 1tt7_A YHFP; alcohol dehydroge 91.9 0.18 6.1E-06 43.7 5.1 96 156-269 148-247 (330)
376 1iz0_A Quinone oxidoreductase; 91.8 0.04 1.4E-06 47.3 0.7 93 155-269 123-218 (302)
377 1piw_A Hypothetical zinc-type 91.7 0.08 2.7E-06 46.6 2.5 96 155-269 177-276 (360)
378 3fbg_A Putative arginate lyase 91.3 0.77 2.6E-05 39.9 8.6 90 157-268 150-247 (346)
379 4a0s_A Octenoyl-COA reductase/ 90.9 0.57 1.9E-05 42.4 7.5 97 155-269 218-336 (447)
380 2cdc_A Glucose dehydrogenase g 90.8 0.49 1.7E-05 41.5 6.8 88 158-270 181-279 (366)
381 3gaz_A Alcohol dehydrogenase s 90.7 0.46 1.6E-05 41.4 6.5 91 155-269 148-246 (343)
382 3c85_A Putative glutathione-re 90.6 1.8 6E-05 33.7 9.3 92 158-268 39-138 (183)
383 3iei_A Leucine carboxyl methyl 90.6 1.8 6E-05 37.8 10.0 115 157-273 90-233 (334)
384 3tqh_A Quinone oxidoreductase; 90.5 0.99 3.4E-05 38.7 8.4 92 155-268 150-244 (321)
385 3ps9_A TRNA 5-methylaminomethy 90.5 0.24 8.2E-06 47.4 4.8 111 157-267 66-217 (676)
386 4eso_A Putative oxidoreductase 90.0 1 3.6E-05 37.2 7.9 101 157-268 7-137 (255)
387 3ggo_A Prephenate dehydrogenas 90.0 2.1 7.3E-05 36.8 10.1 89 158-266 33-125 (314)
388 4f3n_A Uncharacterized ACR, CO 89.8 0.38 1.3E-05 43.5 5.2 44 158-201 138-187 (432)
389 1lss_A TRK system potassium up 89.7 4.1 0.00014 29.5 10.4 90 158-265 4-99 (140)
390 3pvc_A TRNA 5-methylaminomethy 89.6 0.34 1.2E-05 46.5 5.1 111 157-267 58-209 (689)
391 3l9w_A Glutathione-regulated p 89.6 1.7 5.8E-05 39.0 9.4 93 158-268 4-101 (413)
392 1boo_A Protein (N-4 cytosine-s 89.5 0.16 5.4E-06 44.2 2.4 57 212-268 13-83 (323)
393 2vn8_A Reticulon-4-interacting 89.5 0.48 1.7E-05 41.8 5.7 94 155-268 181-279 (375)
394 3av4_A DNA (cytosine-5)-methyl 89.4 0.84 2.9E-05 47.1 7.8 46 157-202 850-896 (1330)
395 4dcm_A Ribosomal RNA large sub 89.1 4.3 0.00015 35.8 11.6 99 157-269 38-136 (375)
396 3llv_A Exopolyphosphatase-rela 88.5 4.1 0.00014 29.9 9.5 90 158-267 6-101 (141)
397 3ius_A Uncharacterized conserv 88.4 2.6 8.8E-05 35.0 9.3 93 159-268 6-101 (286)
398 1yqd_A Sinapyl alcohol dehydro 88.3 0.3 1E-05 43.0 3.4 92 157-269 187-282 (366)
399 3gqv_A Enoyl reductase; medium 88.1 1.9 6.7E-05 37.8 8.6 93 156-269 163-263 (371)
400 3pxx_A Carveol dehydrogenase; 88.1 1.7 6E-05 36.2 8.0 104 157-268 9-152 (287)
401 3grk_A Enoyl-(acyl-carrier-pro 88.1 2 6.9E-05 36.3 8.5 104 157-269 30-169 (293)
402 4dkj_A Cytosine-specific methy 87.7 0.99 3.4E-05 40.5 6.5 45 158-202 10-60 (403)
403 2cf5_A Atccad5, CAD, cinnamyl 87.5 0.18 6.1E-06 44.3 1.4 94 157-269 180-275 (357)
404 1id1_A Putative potassium chan 85.4 6.6 0.00023 29.3 9.3 93 158-268 3-104 (153)
405 3oig_A Enoyl-[acyl-carrier-pro 84.6 4.9 0.00017 33.1 8.9 106 157-269 6-147 (266)
406 1pjc_A Protein (L-alanine dehy 84.6 0.33 1.1E-05 42.8 1.6 100 157-268 166-266 (361)
407 3ijr_A Oxidoreductase, short c 84.1 4.1 0.00014 34.3 8.3 104 157-268 46-181 (291)
408 2vhw_A Alanine dehydrogenase; 84.0 0.46 1.6E-05 42.2 2.3 99 157-268 167-267 (377)
409 3d1l_A Putative NADP oxidoredu 83.9 6.5 0.00022 32.4 9.4 89 158-267 10-100 (266)
410 3pi7_A NADH oxidoreductase; gr 83.9 1.5 5.1E-05 38.1 5.6 91 159-270 166-264 (349)
411 2eez_A Alanine dehydrogenase; 83.6 0.48 1.6E-05 41.9 2.2 100 157-268 165-265 (369)
412 1h2b_A Alcohol dehydrogenase; 83.2 2.4 8.2E-05 37.0 6.7 45 155-199 184-230 (359)
413 3o26_A Salutaridine reductase; 83.2 7.1 0.00024 32.6 9.5 77 157-240 11-101 (311)
414 3edm_A Short chain dehydrogena 83.0 2.8 9.5E-05 34.6 6.7 104 157-268 7-142 (259)
415 2g1u_A Hypothetical protein TM 82.6 2.7 9.2E-05 31.7 6.0 96 156-268 17-117 (155)
416 2g5c_A Prephenate dehydrogenas 82.3 9.4 0.00032 31.7 9.9 89 160-268 3-95 (281)
417 3is3_A 17BETA-hydroxysteroid d 81.6 5.2 0.00018 33.1 7.9 106 157-270 17-153 (270)
418 4e6p_A Probable sorbitol dehyd 81.6 5.9 0.0002 32.5 8.2 72 157-239 7-91 (259)
419 2ae2_A Protein (tropinone redu 81.4 14 0.00048 30.1 10.5 75 157-239 8-96 (260)
420 2zwa_A Leucine carboxyl methyl 80.9 5.5 0.00019 38.1 8.7 114 157-273 107-258 (695)
421 3gvc_A Oxidoreductase, probabl 80.7 5.9 0.0002 33.1 8.0 101 157-268 28-160 (277)
422 3g0o_A 3-hydroxyisobutyrate de 80.5 5.3 0.00018 33.8 7.7 89 158-267 7-100 (303)
423 1wma_A Carbonyl reductase [NAD 80.5 3 0.0001 34.1 6.1 104 157-268 3-137 (276)
424 3ek2_A Enoyl-(acyl-carrier-pro 80.5 4.3 0.00015 33.4 7.0 106 155-269 11-153 (271)
425 3k96_A Glycerol-3-phosphate de 80.4 10 0.00034 33.2 9.6 101 158-268 29-132 (356)
426 3l4b_C TRKA K+ channel protien 80.3 11 0.00037 30.0 9.2 89 160-268 2-98 (218)
427 3k31_A Enoyl-(acyl-carrier-pro 79.8 4.5 0.00015 34.1 7.0 104 157-269 29-168 (296)
428 4fs3_A Enoyl-[acyl-carrier-pro 79.8 9.1 0.00031 31.4 8.8 107 157-270 5-147 (256)
429 4dqx_A Probable oxidoreductase 79.7 8.5 0.00029 32.0 8.6 101 157-268 26-158 (277)
430 3v2g_A 3-oxoacyl-[acyl-carrier 79.2 8.4 0.00029 31.9 8.4 104 157-268 30-164 (271)
431 3ce6_A Adenosylhomocysteinase; 79.0 2.5 8.6E-05 38.9 5.4 88 156-269 272-361 (494)
432 2f1k_A Prephenate dehydrogenas 78.9 13 0.00046 30.6 9.6 85 160-266 2-88 (279)
433 4a27_A Synaptic vesicle membra 78.4 2 6.9E-05 37.3 4.4 91 155-269 140-238 (349)
434 1g60_A Adenine-specific methyl 78.2 1.5 5.3E-05 36.4 3.5 41 228-268 21-73 (260)
435 2gdz_A NAD+-dependent 15-hydro 77.6 9.6 0.00033 31.3 8.3 77 158-240 7-96 (267)
436 1spx_A Short-chain reductase f 77.2 4.8 0.00016 33.3 6.3 74 158-239 6-95 (278)
437 3r3s_A Oxidoreductase; structu 77.2 5.5 0.00019 33.5 6.7 105 157-269 48-185 (294)
438 3lyl_A 3-oxoacyl-(acyl-carrier 77.1 6.7 0.00023 31.7 7.1 74 158-239 5-91 (247)
439 1zsy_A Mitochondrial 2-enoyl t 77.0 2.4 8.2E-05 36.9 4.5 97 155-269 165-270 (357)
440 3c24_A Putative oxidoreductase 77.0 11 0.00039 31.4 8.6 84 159-266 12-98 (286)
441 2km1_A Protein DRE2; yeast, an 76.8 1.1 3.8E-05 33.7 1.9 40 226-267 55-96 (136)
442 1qsg_A Enoyl-[acyl-carrier-pro 76.5 16 0.00056 29.8 9.5 100 158-269 9-148 (265)
443 2a4k_A 3-oxoacyl-[acyl carrier 76.3 16 0.00054 30.0 9.3 101 158-269 6-136 (263)
444 2cfc_A 2-(R)-hydroxypropyl-COM 76.1 10 0.00036 30.5 8.0 73 159-239 3-89 (250)
445 4g81_D Putative hexonate dehyd 75.7 4.8 0.00017 33.5 5.8 105 157-269 8-145 (255)
446 3hwr_A 2-dehydropantoate 2-red 75.6 10 0.00035 32.3 8.1 101 157-269 18-120 (318)
447 1ja9_A 4HNR, 1,3,6,8-tetrahydr 74.8 5.4 0.00019 32.7 6.0 104 157-268 20-154 (274)
448 1eg2_A Modification methylase 74.5 1.7 5.9E-05 37.5 2.8 55 214-268 39-105 (319)
449 2rir_A Dipicolinate synthase, 74.5 8.4 0.00029 32.6 7.2 88 157-268 156-245 (300)
450 3b1f_A Putative prephenate deh 74.2 28 0.00097 28.8 10.5 88 159-266 7-98 (290)
451 3abi_A Putative uncharacterize 74.1 1.3 4.3E-05 39.0 1.9 68 156-238 14-85 (365)
452 1xg5_A ARPG836; short chain de 74.1 18 0.00062 29.8 9.1 76 158-239 32-120 (279)
453 1hdc_A 3-alpha, 20 beta-hydrox 73.9 8.6 0.00029 31.4 7.0 71 158-239 5-88 (254)
454 2ew2_A 2-dehydropantoate 2-red 73.8 22 0.00076 29.6 9.8 101 159-268 4-107 (316)
455 1yxm_A Pecra, peroxisomal tran 73.6 8.3 0.00028 32.3 6.9 79 158-239 18-109 (303)
456 1bg6_A N-(1-D-carboxylethyl)-L 73.6 9 0.00031 32.9 7.3 100 159-268 5-108 (359)
457 4e12_A Diketoreductase; oxidor 72.9 10 0.00034 31.8 7.2 100 159-266 5-118 (283)
458 3f9i_A 3-oxoacyl-[acyl-carrier 72.7 11 0.00037 30.5 7.3 73 156-239 12-93 (249)
459 3gt0_A Pyrroline-5-carboxylate 72.2 2.7 9.3E-05 34.5 3.4 87 159-266 3-94 (247)
460 1zcj_A Peroxisomal bifunctiona 72.0 27 0.00092 31.5 10.4 100 158-266 37-147 (463)
461 3ksu_A 3-oxoacyl-acyl carrier 71.9 8.1 0.00028 31.8 6.3 103 157-268 10-146 (262)
462 1gu7_A Enoyl-[acyl-carrier-pro 71.7 5.5 0.00019 34.6 5.5 97 155-269 164-275 (364)
463 2cvz_A Dehydrogenase, 3-hydrox 71.4 15 0.00052 30.3 8.1 84 160-267 3-88 (289)
464 3asu_A Short-chain dehydrogena 71.3 33 0.0011 27.7 10.0 69 160-239 2-83 (248)
465 2i6t_A Ubiquitin-conjugating e 71.3 8.6 0.0003 32.8 6.5 99 157-270 13-126 (303)
466 3guy_A Short-chain dehydrogena 71.2 22 0.00075 28.2 8.7 69 160-239 3-81 (230)
467 1g0o_A Trihydroxynaphthalene r 70.9 7.9 0.00027 32.2 6.2 104 158-269 29-163 (283)
468 1e7w_A Pteridine reductase; di 70.9 33 0.0011 28.4 10.1 60 158-225 9-73 (291)
469 4hp8_A 2-deoxy-D-gluconate 3-d 70.9 34 0.0011 28.2 9.8 101 157-269 8-138 (247)
470 3u5t_A 3-oxoacyl-[acyl-carrier 70.8 10 0.00035 31.3 6.8 104 157-268 26-160 (267)
471 3slk_A Polyketide synthase ext 70.7 8.1 0.00028 37.7 6.9 95 154-268 342-441 (795)
472 3d4o_A Dipicolinate synthase s 70.4 8.7 0.0003 32.4 6.3 88 157-268 154-243 (293)
473 2aef_A Calcium-gated potassium 70.1 24 0.00084 28.2 8.8 90 158-268 9-104 (234)
474 4e21_A 6-phosphogluconate dehy 69.6 4.5 0.00015 35.5 4.4 90 158-267 22-113 (358)
475 1cyd_A Carbonyl reductase; sho 69.1 30 0.001 27.5 9.2 71 157-239 6-85 (244)
476 1sby_A Alcohol dehydrogenase; 68.8 44 0.0015 26.8 10.6 72 158-239 5-93 (254)
477 2pd4_A Enoyl-[acyl-carrier-pro 67.3 20 0.0007 29.4 7.9 100 158-269 6-144 (275)
478 4imr_A 3-oxoacyl-(acyl-carrier 67.2 8 0.00027 32.2 5.4 75 157-239 32-118 (275)
479 2hwk_A Helicase NSP2; rossman 67.2 4.3 0.00015 34.5 3.5 51 218-269 195-254 (320)
480 1mxh_A Pteridine reductase 2; 67.1 48 0.0016 27.0 10.3 75 158-239 11-103 (276)
481 2qhx_A Pteridine reductase 1; 67.0 35 0.0012 29.0 9.6 60 158-225 46-110 (328)
482 3gvp_A Adenosylhomocysteinase 66.9 9 0.00031 34.5 5.8 86 157-268 219-306 (435)
483 3i83_A 2-dehydropantoate 2-red 66.7 24 0.0008 30.0 8.4 97 159-270 3-106 (320)
484 2vz8_A Fatty acid synthase; tr 66.6 12 0.00041 41.4 7.8 100 155-268 1665-1769(2512)
485 3qha_A Putative oxidoreductase 66.3 4.6 0.00016 34.1 3.7 86 159-267 16-103 (296)
486 2hmt_A YUAA protein; RCK, KTN, 65.9 19 0.00065 25.8 6.8 89 158-267 6-102 (144)
487 3trk_A Nonstructural polyprote 65.3 2.3 7.9E-05 35.7 1.5 41 228-268 209-258 (324)
488 4fn4_A Short chain dehydrogena 65.2 15 0.00051 30.4 6.6 104 157-268 6-142 (254)
489 3tri_A Pyrroline-5-carboxylate 64.8 12 0.0004 31.4 5.9 87 159-266 4-95 (280)
490 3qiv_A Short-chain dehydrogena 64.4 16 0.00053 29.6 6.6 75 157-239 8-95 (253)
491 3imf_A Short chain dehydrogena 63.6 22 0.00074 28.9 7.3 75 157-239 5-92 (257)
492 3ado_A Lambda-crystallin; L-gu 62.6 13 0.00043 32.1 5.8 102 157-266 5-120 (319)
493 1oaa_A Sepiapterin reductase; 62.4 32 0.0011 27.8 8.2 61 158-224 6-72 (259)
494 2h78_A Hibadh, 3-hydroxyisobut 62.4 7.6 0.00026 32.7 4.3 87 159-267 4-95 (302)
495 3iht_A S-adenosyl-L-methionine 62.3 21 0.00071 27.5 6.1 32 157-188 40-72 (174)
496 4e3z_A Putative oxidoreductase 61.7 20 0.00069 29.4 6.8 74 158-239 26-113 (272)
497 3d3w_A L-xylulose reductase; u 61.5 53 0.0018 26.0 9.3 71 157-239 6-85 (244)
498 3dmg_A Probable ribosomal RNA 61.5 9.7 0.00033 33.6 5.0 93 158-268 46-138 (381)
499 3tjr_A Short chain dehydrogena 61.4 18 0.00063 30.3 6.6 75 157-239 30-117 (301)
500 3v8b_A Putative dehydrogenase, 61.4 30 0.001 28.7 7.9 75 157-239 27-114 (283)
No 1
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.94 E-value=2.4e-26 Score=196.40 Aligned_cols=189 Identities=41% Similarity=0.790 Sum_probs=153.1
Q ss_pred cccccccCCCCCCCccccHHHHHHHHhCCCCcchhhhhhHHHHHhhhcccccccccccccCCCCcccccccchHHHHHHH
Q 023787 66 SSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQML 145 (277)
Q Consensus 66 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~yW~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 145 (277)
|..++..|.+++|+.|.+.+++|++.+...... ....||....+||+.....++++++++........... ..+
T Consensus 12 ~~~~~~~g~d~~~~~~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 85 (254)
T 1xtp_A 12 SRNLPISGRDTNGKTYRSTDEMWKAELTGDLYD--PEKGWYGKALEYWRTVPATVSGVLGGMDHVHDVDIEGS----RNF 85 (254)
T ss_dssp -CCCCCCEEETTSCEESCHHHHHHHHSCSCTTC--TTTCHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHH----HHH
T ss_pred cccccccccCCCCcccccHHHHHHHHHhccccc--cchhhhhhhhhHHhcCCccccceecCcCccCHHHHHHH----HHH
Confidence 555678899999999999999999987653332 22358988999999998888888877765443333322 222
Q ss_pred HhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC
Q 023787 146 LSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (277)
Q Consensus 146 ~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 225 (277)
+.. +. ..++.+|||||||+|.++..++..+..+|+++|+|+.|++.|++++.. ..++++.+.|+.+++
T Consensus 86 l~~-l~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 86 IAS-LP---GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG--------MPVGKFILASMETAT 153 (254)
T ss_dssp HHT-ST---TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT--------SSEEEEEESCGGGCC
T ss_pred HHh-hc---ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc--------CCceEEEEccHHHCC
Confidence 222 22 346789999999999999999888766799999999999999999865 256899999999888
Q ss_pred CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+++++||+|++..+++|+++++...+++++.++|||||++++.+++.
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 200 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCS 200 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 77789999999999999987789999999999999999999998753
No 2
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.90 E-value=8.6e-24 Score=179.69 Aligned_cols=163 Identities=45% Similarity=0.912 Sum_probs=130.9
Q ss_pred hhhHHHHHhhhcccccccccccccCCCCcccccccchHHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCC
Q 023787 102 KTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN 181 (277)
Q Consensus 102 ~~~~y~~~~~yW~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~ 181 (277)
...||+...+||+.....++.++++|..+...+......++..++..... ..++.+|||||||+|.++..++..+..
T Consensus 27 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~~~ 103 (241)
T 2ex4_A 27 EKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPN---KTGTSCALDCGAGIGRITKRLLLPLFR 103 (241)
T ss_dssp HHHHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHGGGC-------CCCCSEEEEETCTTTHHHHHTTTTTCS
T ss_pred cchhHHHHHHHHhcCCccccccccCCCCcchhhHHhHHHHHHHHHHhccc---CCCCCEEEEECCCCCHHHHHHHHhcCC
Confidence 44688888999999998888888777655554445555555554432211 235789999999999999988877766
Q ss_pred cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCC
Q 023787 182 EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKP 261 (277)
Q Consensus 182 ~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~Lkp 261 (277)
+|+++|+|+.|++.|++++...+ ..++++++.|+.++++++++||+|++..+++|++++++..+++++.++|||
T Consensus 104 ~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 177 (241)
T 2ex4_A 104 EVDMVDITEDFLVQAKTYLGEEG------KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRP 177 (241)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGG------GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred EEEEEeCCHHHHHHHHHHhhhcC------CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCC
Confidence 89999999999999999986532 146889999998888777799999999999999977788999999999999
Q ss_pred CcEEEEEecCCC
Q 023787 262 GGFFVLKENIAR 273 (277)
Q Consensus 262 GG~lii~e~~~~ 273 (277)
||++++.+++..
T Consensus 178 gG~l~i~~~~~~ 189 (241)
T 2ex4_A 178 NGIIVIKDNMAQ 189 (241)
T ss_dssp EEEEEEEEEEBS
T ss_pred CeEEEEEEccCC
Confidence 999999987543
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.87 E-value=1.1e-21 Score=168.98 Aligned_cols=111 Identities=14% Similarity=0.278 Sum_probs=97.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC---cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN---EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~---~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
+++.+|||||||+|..+..+++.... +|+|+|+|+.|++.|++++...+. ..+++++++|+.+++++ +||
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~-----~~~v~~~~~D~~~~~~~--~~d 141 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA-----PTPVDVIEGDIRDIAIE--NAS 141 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCTTTCCCC--SEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc-----CceEEEeeccccccccc--ccc
Confidence 47889999999999999998876432 799999999999999999876544 45799999999998764 599
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
+|+++.++||+++++...+|++++++|||||+|+++|....
T Consensus 142 ~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 142 MVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred cceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 99999999999988888999999999999999999987654
No 4
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.84 E-value=1.4e-20 Score=158.87 Aligned_cols=110 Identities=22% Similarity=0.389 Sum_probs=97.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||+|||+|.++..++...+ .+|+++|+|+.|++.|++++... .+++++++|+.+++++ ++||+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~~~-~~fD~ 112 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN--------LKVKYIEADYSKYDFE-EKYDM 112 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC--------TTEEEEESCTTTCCCC-SCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC--------CCEEEEeCchhccCCC-CCceE
Confidence 44678999999999999999998863 37999999999999999998763 3799999999998877 89999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
|++..+++|+++++...+++++.++|||||++++.+....
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 9999999999977777899999999999999999986543
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.83 E-value=1e-20 Score=156.94 Aligned_cols=112 Identities=11% Similarity=-0.005 Sum_probs=91.7
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCC----C--CCCCcceeEEEcCCCCCCCCC-
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM----A--PDMHKATNFFCVPLQDFTPET- 228 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~----~--~~~~~~~~~~~~d~~~~~~~~- 228 (277)
.++.+|||+|||+|..+..+++.++ +|+|+|+|+.|++.|+++....... + .....+++++++|+.++++++
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 4678999999999999999998876 6999999999999999986531000 0 000246899999999988664
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
++||+|++..+++|++.++...++++++++|||||++++.
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 7899999999999999888888999999999999984443
No 6
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.83 E-value=7.9e-20 Score=152.62 Aligned_cols=105 Identities=26% Similarity=0.285 Sum_probs=92.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.+++++. .++++.++|+.+++++ ++||+|+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~d~~~~~~~-~~fD~v~ 111 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP----------KEFSITEGDFLSFEVP-TSIDTIV 111 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC----------TTCCEESCCSSSCCCC-SCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC----------CceEEEeCChhhcCCC-CCeEEEE
Confidence 3678999999999999999987755 69999999999999999875 2478899999998877 8999999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+..+++|+++.+...+++++.++|||||.+++.+...
T Consensus 112 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 112 STYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred ECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 9999999997665669999999999999999997543
No 7
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=1.9e-20 Score=160.59 Aligned_cols=112 Identities=13% Similarity=0.083 Sum_probs=92.4
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCC-------CCCCC----CCCcceeEEEcCCCCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE-------NHMAP----DMHKATNFFCVPLQDF 224 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~-------~~~~~----~~~~~~~~~~~d~~~~ 224 (277)
.++.+|||+|||+|..+..|++.++ +|+|||+|+.|++.|+++.... ...+. ....+++|+++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 3668999999999999999998877 5999999999999998876410 00000 0025689999999998
Q ss_pred CCCC-CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 225 TPET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 225 ~~~~-~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
++++ ++||+|++..+++++++++...+++++.++|||||++++.
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 8653 7999999999999999888889999999999999999754
No 8
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.82 E-value=5e-20 Score=152.06 Aligned_cols=103 Identities=20% Similarity=0.336 Sum_probs=93.3
Q ss_pred CccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecc
Q 023787 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~ 237 (277)
+.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++. .++.++++|+.++++++++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH-----------PSVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC-----------TTSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-----------CCCeEEeCcccccccCCCCeEEEEeh
Confidence 67999999999999999988766 6999999999999999984 34889999999988777899999999
Q ss_pred hhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
.+++|++.++...+++++.++|||||++++.+...
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 99999987788999999999999999999987544
No 9
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.82 E-value=8.7e-20 Score=159.49 Aligned_cols=112 Identities=20% Similarity=0.265 Sum_probs=98.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|..+..+++....+|+|+|+|+.|++.|+++....++ ..++++.++|+.++++++++||+|
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 154 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL-----ADNITVKYGSFLEIPCEDNSYDFI 154 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC-----TTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEEcCcccCCCCCCCEeEE
Confidence 457789999999999999999887444799999999999999998765443 357899999999998888899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
++..+++|++ +...+++++.++|||||++++.+....
T Consensus 155 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 155 WSQDAFLHSP--DKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EecchhhhcC--CHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 9999999999 577999999999999999999986543
No 10
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.81 E-value=1.9e-19 Score=156.54 Aligned_cols=110 Identities=17% Similarity=0.211 Sum_probs=95.8
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++....+|+|+|+|+.+++.+++++...++ ..++++...|+.+++ ++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN-----LRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC-----CSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-----CCCeEEEECChhhCC---CCeeEE
Confidence 557789999999999999999855445899999999999999999876544 357899999998765 789999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
++..+++|+++++...+++++.++|||||++++.+...
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 99999999976688899999999999999999987653
No 11
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.81 E-value=2e-19 Score=155.16 Aligned_cols=111 Identities=18% Similarity=0.238 Sum_probs=98.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|..+..+++....+|+++|+|+.+++.+++++...++ ..++.+.++|+.++++++++||+|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 133 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL-----ANRVTFSYADAMDLPFEDASFDAV 133 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECccccCCCCCCCccEE
Confidence 457789999999999999999877656899999999999999999876544 346899999999998888899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
++..+++|++ +...+++++.++|||||++++.+...
T Consensus 134 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 134 WALESLHHMP--DRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp EEESCTTTSS--CHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred EEechhhhCC--CHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 9999999998 56799999999999999999998653
No 12
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.81 E-value=1.9e-20 Score=160.94 Aligned_cols=98 Identities=20% Similarity=0.302 Sum_probs=86.2
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
...+|||||||+|..+..++..+. +|+|+|+|+.|++.|++ ..++.+.+++++++++++++||+|++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~------------~~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALR------------HPRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCC------------CTTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhh------------cCCceeehhhhhhhcccCCcccEEEE
Confidence 457899999999999998886654 69999999999987753 25689999999999999999999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
..++||++ ...++++++|+|||||+|++..+
T Consensus 106 ~~~~h~~~---~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 106 AQAMHWFD---LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp CSCCTTCC---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeehhHhh---HHHHHHHHHHHcCCCCEEEEEEC
Confidence 99999986 34799999999999999998765
No 13
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.81 E-value=1.4e-19 Score=155.28 Aligned_cols=109 Identities=19% Similarity=0.253 Sum_probs=95.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..++..+. +|+++|+|+.|++.|++++...+. .++.+.++|+.++++++++||+|
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~l~~~~~~fD~V 107 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGH------QQVEYVQGDAEQMPFTDERFHIV 107 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCC-CCCSCTTCEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEecHHhCCCCCCCEEEE
Confidence 34678999999999999998887765 799999999999999998765433 46899999999998888899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+++.+++|++ +...+++++.++|||||++++.+...
T Consensus 108 ~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 108 TCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred EEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 9999999998 66799999999999999999987654
No 14
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.81 E-value=2e-19 Score=154.06 Aligned_cols=111 Identities=20% Similarity=0.246 Sum_probs=99.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..++.....+|+|+|+|+.|++.|+++... ..++++.+.|+.++++++++||+|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v 124 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG--------NNKIIFEANDILTKEFPENNFDLI 124 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS--------CTTEEEEECCTTTCCCCTTCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc--------CCCeEEEECccccCCCCCCcEEEE
Confidence 567789999999999999999987544799999999999999998765 257899999999998888899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
++..+++|++.++...+++++.++|||||++++.+....
T Consensus 125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 125 YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 999999999777899999999999999999999986543
No 15
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=3.7e-19 Score=148.53 Aligned_cols=114 Identities=20% Similarity=0.135 Sum_probs=96.5
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++...++... ...++++.++|+...+.+.++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRN-QWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHH-HHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcc-cCcceEEEeCCcccccccCCCcCEE
Confidence 3567999999999999999987765 3899999999999999999876544100 0126999999998777666799999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++..+++|+++++...+++++.++|||||++++..+
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 999999999988888999999999999998888765
No 16
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.80 E-value=1.1e-19 Score=153.94 Aligned_cols=103 Identities=16% Similarity=0.127 Sum_probs=92.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||||||+|.++..++..+. +|+++|+|+.+++.++++.. ..+++++++|+.++++++++||+|++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGE---------GPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTC---------BTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcc---------cCCceEEEcchhcCCCCCCCccEEEE
Confidence 667999999999999999988755 69999999999999998753 35789999999999887889999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
..+++|++ +...+++++.++|+|||++++.+..
T Consensus 123 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 123 INSLEWTE--EPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp ESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 99999998 6679999999999999999998753
No 17
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.80 E-value=4.1e-19 Score=155.82 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=96.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++....+|+|+|+|+.|++.|++++...++ ..++++.++|+.++ +++||+|
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~---~~~fD~v 141 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS-----PRRKEVRIQGWEEF---DEPVDRI 141 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCC-----SSCEEEEECCGGGC---CCCCSEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECCHHHc---CCCccEE
Confidence 467789999999999999999988446799999999999999999876554 34789999999876 5799999
Q ss_pred ecchhhhcCC-------hhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 235 WVQWCIGHLT-------DDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~-------~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
++..+++|++ .+++..+++++.++|||||++++.+....
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 9999999994 35678999999999999999999876543
No 18
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.80 E-value=3.8e-19 Score=151.81 Aligned_cols=104 Identities=17% Similarity=0.252 Sum_probs=94.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..+++.++.+|+++|+|+.|++.|+++... .++.+.++|+.++++++++||+|
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTS---------PVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCC---------TTEEEEECCGGGCCCCTTCEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhcc---------CCeEEEEcchhhCCCCCCCeEEE
Confidence 446789999999999999999988776899999999999999998762 56899999999988878899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
++..+++|++ +...+++++.++|||||++++..
T Consensus 113 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 113 LSSLALHYIA--SFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEchhhhhhh--hHHHHHHHHHHHcCCCcEEEEEe
Confidence 9999999997 77799999999999999999974
No 19
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.80 E-value=6.4e-19 Score=155.60 Aligned_cols=111 Identities=18% Similarity=0.239 Sum_probs=96.8
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++....+|+|+|+|+.|++.|++++...++ ..++++.+.|+.+++ ++||+|
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~---~~fD~v 159 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT-----NRSRQVLLQGWEDFA---EPVDRI 159 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECChHHCC---CCcCEE
Confidence 557789999999999999999877333799999999999999999876554 356899999998764 689999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
++..+++|+++++...+++++.++|||||++++.+....
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 999999999877889999999999999999999876543
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.80 E-value=5.2e-19 Score=147.07 Aligned_cols=106 Identities=21% Similarity=0.324 Sum_probs=93.3
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|.++..++..+. +|+++|+|+.|++.+++. . ..+++++++|+.++ +++++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~--~--------~~~~~~~~~d~~~~-~~~~~~D~v~ 112 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGRH--G--------LDNVEFRQQDLFDW-TPDRQWDAVF 112 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGGG--C--------CTTEEEEECCTTSC-CCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHhc--C--------CCCeEEEecccccC-CCCCceeEEE
Confidence 4567999999999999999988855 699999999999999882 1 25689999999988 6678999999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
+..+++|+++++...+++++.++|||||++++.+...+
T Consensus 113 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 113 FAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 99999999977778999999999999999999987553
No 21
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.79 E-value=4.9e-19 Score=147.90 Aligned_cols=115 Identities=20% Similarity=0.178 Sum_probs=96.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.|++++...++.... ..++++.++|+...+.++++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQ-RKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHH-HTTEEEEECCSSSCCGGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhcccccc-CcceEEEeCcccccccccCCCCEE
Confidence 3567999999999999998887665 48999999999999999998764331000 016899999998777667899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++..+++|++++++..+++++.++|||||++++..+.
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 9999999999887889999999999999988877653
No 22
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.79 E-value=3.8e-19 Score=151.88 Aligned_cols=109 Identities=17% Similarity=0.120 Sum_probs=96.1
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|..+..++.....+|+++|+|+.|++.|+++....++ ..++++.++|+.++++ +++||+|
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV-----SERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCCTTCCC-SSCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECChHhCCc-CCCCCEE
Confidence 457789999999999999999887655799999999999999999876544 3579999999999877 6899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++..+++|++ +...++++++++|||||++++.+..
T Consensus 108 ~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 108 ACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp EEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred EECCChHhcC--CHHHHHHHHHHHcCCCeEEEEecCc
Confidence 9999999998 6679999999999999999998754
No 23
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.79 E-value=5.7e-19 Score=150.85 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=96.4
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|..+..+++.++.+|+|+|+|+.+++.|++++...++ ..+++++++|+.++++++++||+|
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 118 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC-----ADRVKGITGSMDNLPFQNEELDLI 118 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECChhhCCCCCCCEEEE
Confidence 456789999999999999999988776899999999999999999877654 346999999999988888899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++..+++|++ ...+++++.++|||||++++.+.
T Consensus 119 ~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 119 WSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp EEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEe
Confidence 9999999983 55899999999999999999975
No 24
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.79 E-value=1.1e-18 Score=144.65 Aligned_cols=109 Identities=17% Similarity=0.191 Sum_probs=95.3
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|.++..++..++.+|+++|+|+.+++.++++... ..++.+.+.|+.++++++++||+|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--------~~~i~~~~~d~~~~~~~~~~fD~v~ 112 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--------VPQLRWETMDVRKLDFPSASFDVVL 112 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--------CTTCEEEECCTTSCCSCSSCEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--------CCCcEEEEcchhcCCCCCCcccEEE
Confidence 36789999999999999999988775799999999999999999764 2568999999999887778999999
Q ss_pred cchhhhcCC-------------hhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 236 VQWCIGHLT-------------DDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 236 ~~~~l~~~~-------------~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+..+++++. ..+...+++++.++|||||++++.+...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 999998765 4467899999999999999999987643
No 25
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.79 E-value=3.9e-19 Score=148.09 Aligned_cols=106 Identities=16% Similarity=0.237 Sum_probs=93.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..++..+. +|+++|+|+.|++.|++++.. ..++++++.|+.+++ ++++||+|
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~-~~~~fD~v 118 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKR--------WSHISWAATDILQFS-TAELFDLI 118 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTT--------CSSEEEEECCTTTCC-CSCCEEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhccc--------CCCeEEEEcchhhCC-CCCCccEE
Confidence 45678999999999999998887764 699999999999999999876 247999999999988 56899999
Q ss_pred ecchhhhcCCh-hhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+++.+++|+++ +++..+++++.++|||||++++...
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 99999999984 4567899999999999999999753
No 26
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.79 E-value=2.6e-19 Score=148.79 Aligned_cols=107 Identities=19% Similarity=0.182 Sum_probs=94.8
Q ss_pred ccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecch
Q 023787 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQW 238 (277)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~~ 238 (277)
.+|||+|||+|..+..+++....+|+++|+|+.+++.|++++...+. ..++++.+.|+.++++++++||+|++..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL-----NDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc-----cCceEEEEcCHHHCCCCcccccEEEECc
Confidence 39999999999999999887333799999999999999999876544 3579999999999888888999999999
Q ss_pred hhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 239 CIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 239 ~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+++|++ +...+++++.++|||||++++.+...
T Consensus 120 ~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 120 SVFFWE--DVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp CGGGCS--CHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred hHhhcc--CHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 999997 77799999999999999999987654
No 27
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.79 E-value=4.9e-19 Score=153.03 Aligned_cols=120 Identities=26% Similarity=0.308 Sum_probs=101.0
Q ss_pred HHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE
Q 023787 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (277)
Q Consensus 140 ~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 218 (277)
..+...+..... ..++.+|||||||+|.++..++..++ .+|+++|+|+.+++.+++++...+. .++.+.+
T Consensus 23 ~~l~~~l~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~ 93 (276)
T 3mgg_A 23 ETLEKLLHHDTV---YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI------KNVKFLQ 93 (276)
T ss_dssp CHHHHHHHTTCC---CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEE
T ss_pred HHHHHHHhhccc---CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEE
Confidence 344444443332 45788999999999999999998864 3899999999999999999866443 4689999
Q ss_pred cCCCCCCCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 219 VPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 219 ~d~~~~~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.|+.++++++++||+|++..+++|++ +...+++++.++|||||++++.+.
T Consensus 94 ~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 94 ANIFSLPFEDSSFDHIFVCFVLEHLQ--SPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp CCGGGCCSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccCCCCCCCeeEEEEechhhhcC--CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 99999888888999999999999998 556999999999999999999874
No 28
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.78 E-value=4.5e-19 Score=150.42 Aligned_cols=110 Identities=16% Similarity=0.204 Sum_probs=97.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..++..+. +|+++|+|+.|++.+++++...+. .++.+.++|+.++++++++||+|
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGV------ENVRFQQGTAESLPFPDDSFDII 91 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTC------CSEEEEECBTTBCCSCTTCEEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCC------CCeEEEecccccCCCCCCcEEEE
Confidence 56788999999999999998887765 799999999999999998765432 46899999999988888899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
++..+++|++ +...+++++.++|||||++++.+...+
T Consensus 92 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 92 TCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred EECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 9999999998 677999999999999999999987543
No 29
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.78 E-value=1.2e-18 Score=149.95 Aligned_cols=109 Identities=20% Similarity=0.247 Sum_probs=96.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++....+|+|+|+|+.|++.|++++...++ ..+++++++|+.++++++++||+|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL-----QNRVTGIVGSMDDLPFRNEELDLI 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC-----CcCcEEEEcChhhCCCCCCCEEEE
Confidence 457789999999999999998877444899999999999999999876554 356999999999988878899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++..+++|++ ...+++++.++|||||++++.+..
T Consensus 119 ~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 119 WSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp EESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred EEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEee
Confidence 9999999983 458999999999999999998754
No 30
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.78 E-value=8e-19 Score=148.59 Aligned_cols=101 Identities=23% Similarity=0.273 Sum_probs=89.3
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++... +++++++|+.++ +++++||+|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~----------~v~~~~~d~~~~-~~~~~fD~v~~ 109 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD----------GITYIHSRFEDA-QLPRRYDNIVL 109 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS----------CEEEEESCGGGC-CCSSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC----------CeEEEEccHHHc-CcCCcccEEEE
Confidence 567899999999999998887766 699999999999999998642 588999999887 45689999999
Q ss_pred chhhhcCChhhHHHHHHHHH-hcCCCCcEEEEEecC
Q 023787 237 QWCIGHLTDDDFVSFFKRAK-VGLKPGGFFVLKENI 271 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~-r~LkpGG~lii~e~~ 271 (277)
..+++|++ +...+++++. ++|||||++++.+..
T Consensus 110 ~~~l~~~~--~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 110 THVLEHID--DPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp ESCGGGCS--SHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hhHHHhhc--CHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 99999998 5679999999 999999999998754
No 31
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.78 E-value=7.9e-19 Score=148.29 Aligned_cols=108 Identities=18% Similarity=0.068 Sum_probs=93.9
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|++++...+. ..+++++++|+.+++.. ++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPK-----AEYFSFVKEDVFTWRPT-ELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGG-----GGGEEEECCCTTTCCCS-SCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCC-----CcceEEEECchhcCCCC-CCeeEEEE
Confidence 346999999999999998875544 699999999999999999876332 35799999999997744 59999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
..+++|+++++...+++++.++|||||++++.+..
T Consensus 139 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 139 YVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp ESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 99999999888999999999999999999998653
No 32
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.78 E-value=1.2e-18 Score=144.63 Aligned_cols=102 Identities=23% Similarity=0.406 Sum_probs=90.2
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++. ++.+.++|+.+++ .+++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------------~~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL------------GRPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH------------TSCCEECCGGGCC-CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc------------CCceEEeeeccCC-CCCcEEEEE
Confidence 3578999999999999999987755 6999999999999999986 2456778888877 568999999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+..+++|+++++...+++++.++|||||++++....
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 999999999888999999999999999999998554
No 33
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.78 E-value=1.1e-18 Score=143.02 Aligned_cols=109 Identities=20% Similarity=0.244 Sum_probs=95.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|..+..++..+. +|+++|+|+.+++.+++++...+. .++++.+.|+.++++ +++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~-~~~~D~v~ 102 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENL------DNLHTRVVDLNNLTF-DRQYDFIL 102 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECCGGGCCC-CCCEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCC------CCcEEEEcchhhCCC-CCCceEEE
Confidence 3567999999999999999987755 699999999999999998765332 358999999998877 68999999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+..+++|+++++...+++++.++|||||++++.+...
T Consensus 103 ~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 103 STVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 9999999998888999999999999999998876544
No 34
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.77 E-value=1.6e-18 Score=144.53 Aligned_cols=111 Identities=15% Similarity=0.188 Sum_probs=97.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||+|||+|.++..++..+ + .+|+++|+|+.+++.+++++...++ .++.+.+.|+.++++++++||
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD 108 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL------KNVEVLKSEENKIPLPDNTVD 108 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECBTTBCSSCSSCEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEecccccCCCCCCCee
Confidence 4567899999999999999998876 2 3799999999999999999865433 368999999999888888999
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
+|++..+++|++ +...+++++.++|||||++++.+....
T Consensus 109 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 109 FIFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp EEEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 999999999998 667999999999999999999976543
No 35
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.77 E-value=5.8e-19 Score=153.41 Aligned_cols=106 Identities=23% Similarity=0.290 Sum_probs=93.8
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeEEe
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~Vi 235 (277)
++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|++++...++ ..+++++++|+.+++ +.+++||+|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGV-----SDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CC-----GGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-----CcceEEEEcCHHHhhhhcCCCceEEE
Confidence 467999999999999999987755 699999999999999999877554 367999999999887 6678999999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+..+++|++ +...+++++.++|||||++++.+.
T Consensus 142 ~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 142 FHAVLEWVA--DPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECchhhccc--CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 999999998 667999999999999999999864
No 36
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.77 E-value=2.8e-18 Score=142.40 Aligned_cols=100 Identities=19% Similarity=0.237 Sum_probs=88.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|..+..+ +..+++++|+|+.|++.++++. .++.+.+.|+.++++++++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----------PEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----------TTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcccccCCCCCCcEEEEEE
Confidence 6789999999999999866 4437999999999999999986 2478899999998888789999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
..+++|++ +...+++++.++|||||.+++.+...
T Consensus 102 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 102 FTTLEFVE--DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp ESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred cChhhhcC--CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 99999998 67799999999999999999987543
No 37
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=1.6e-18 Score=147.19 Aligned_cols=109 Identities=17% Similarity=0.031 Sum_probs=94.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC-----C
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----G 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~ 229 (277)
..++.+|||+|||+|.++..++..+. +|+++|+|+.|++.|+++... .+++++++|+.+++... .
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~ 123 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA---------ANISYRLLDGLVPEQAAQIHSEI 123 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC---------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc---------cCceEEECccccccccccccccc
Confidence 34678999999999999999998877 699999999999999998743 46899999998865321 2
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
+||+|++..++||+++++...+++++.++|||||++++.+....
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 49999999999999988889999999999999999999987543
No 38
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.77 E-value=1.7e-18 Score=143.25 Aligned_cols=111 Identities=17% Similarity=0.157 Sum_probs=93.2
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|..+..++.....+|+++|+|+.|++.++++.... ..++.+.+.|+.++++++++||+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------NFKLNISKGDIRKLPFKDESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH-------TCCCCEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEECchhhCCCCCCceeEEE
Confidence 456899999999999744344443347999999999999999987542 2357889999999888778999999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
+..+++|++.++...+++++.++|||||++++.+....
T Consensus 95 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred EcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 99999999877899999999999999999999876543
No 39
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.77 E-value=3.3e-19 Score=151.27 Aligned_cols=105 Identities=18% Similarity=0.134 Sum_probs=87.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC--CCCCCceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~ 233 (277)
.++.+|||||||+|..+..+++..+.+|++||+|+.|++.|+++.... ..++.++.++..+. .+++++||.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhC-------CCceEEEeehHHhhcccccccCCce
Confidence 478899999999999999888766668999999999999999998764 34677888876654 356688999
Q ss_pred Ee-----cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IW-----VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi-----~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+ +...++|++ +...++++++|+|||||+|++.+
T Consensus 132 i~~D~~~~~~~~~~~~--~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 132 ILYDTYPLSEETWHTH--QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTH--HHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEEeeeecccchhhhc--chhhhhhhhhheeCCCCEEEEEe
Confidence 97 356667766 77799999999999999998864
No 40
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.77 E-value=3.4e-18 Score=146.78 Aligned_cols=105 Identities=21% Similarity=0.290 Sum_probs=91.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|+++.. ++.++++|+.++++ +++||+|++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP-----------DAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC-----------CCEEEECChHHCCc-cCCcCEEEE
Confidence 568999999999999998887765 69999999999999999853 47899999999877 579999999
Q ss_pred ch-hhhcCCh-hhHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 023787 237 QW-CIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (277)
Q Consensus 237 ~~-~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (277)
.. +++|+++ ++...+++++.++|||||++++.+...++
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 98 9999964 57789999999999999999997654433
No 41
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.77 E-value=1.7e-18 Score=146.50 Aligned_cols=104 Identities=19% Similarity=0.279 Sum_probs=92.7
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||||||+|..+..++..+..+|+++|+|+.|++.++++... .++++.+.|+.++++++++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---------TGITYERADLDKLHLPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---------SSEEEEECCGGGCCCCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---------CCceEEEcChhhccCCCCCceEEE
Confidence 46789999999999999999887664799999999999999998754 358899999998887778999999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+..+++|++ +...+++++.++|||||++++.+.
T Consensus 113 ~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 113 SSLALHYVE--DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Eeccccccc--hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 999999998 677999999999999999999763
No 42
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.76 E-value=2.2e-18 Score=151.91 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=97.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..+++....+|+|+|+|+.|++.|++++...++ ..+++++++|+.++++++++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRI-----DDHVRSRVCNMLDTPFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhcCCCCCCCEeEE
Confidence 456789999999999999999887444799999999999999999877554 357999999999998888899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
++..+++|++ ...+++++.++|||||++++.+.+..
T Consensus 190 ~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 190 WNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp EEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 9999999995 66899999999999999999876543
No 43
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.76 E-value=5.7e-18 Score=141.74 Aligned_cols=107 Identities=21% Similarity=0.235 Sum_probs=93.0
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|..+..++..++ +++++|+|+.+++.|+++.... ..+++++++|+.++++++++||+|++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSR-------ESNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc-------CCCceEEECchhcCCCCCCcEEEEEE
Confidence 478999999999999998887766 7999999999999999987543 24688999999998877789999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+.++++....+...+++++.++|||||++++.+..
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 99976666668889999999999999999998653
No 44
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.76 E-value=2.6e-18 Score=149.61 Aligned_cols=110 Identities=17% Similarity=0.125 Sum_probs=95.6
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-CCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~fD~V 234 (277)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|++++...+. ..++.++++|+.+.++ ++++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR-----RFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC-----SSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CccEEEEECCccccccCCCCCcCEE
Confidence 46789999999999999988877665899999999999999999876443 3568999999998876 56899999
Q ss_pred ecchhhhc--CChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGH--LTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~--~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++..++|| ...++...+++++.++|||||++++...
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99999998 5566788999999999999999999864
No 45
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.76 E-value=7.7e-19 Score=148.68 Aligned_cols=107 Identities=17% Similarity=0.152 Sum_probs=87.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC--CCCCCceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~ 233 (277)
.++.+|||||||+|..+..++...+.+|+++|+|+.|++.|+++.... ..++.++++|+.++ ++++++||+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhc-------CCCeEEEecCHHHhhcccCCCceEE
Confidence 467899999999999999886555558999999999999999988653 24689999999887 677789999
Q ss_pred Eec-chhh--hcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IWV-QWCI--GHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~-~~~l--~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|++ .+.+ +.....+...++++++++|||||+|++.+
T Consensus 132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 999 5543 23333456688999999999999999875
No 46
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.76 E-value=6.9e-18 Score=146.78 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=94.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|++++... ..++++.+.|+.+++++ ++||
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~~v~~~~~d~~~~~~~-~~fD 91 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-------PYDSEFLEGDATEIELN-DKYD 91 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-------SSEEEEEESCTTTCCCS-SCEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEEcchhhcCcC-CCee
Confidence 45778999999999999999887754 37999999999999999998653 23799999999998875 6999
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+|++..+++|++ +...++++++++|||||++++.+..
T Consensus 92 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAFLLHMT--TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCGGGCS--SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECChhhcCC--CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999999999998 6679999999999999999998764
No 47
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.75 E-value=3.2e-18 Score=145.10 Aligned_cols=101 Identities=12% Similarity=0.126 Sum_probs=88.8
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC--CCCCCceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~ 233 (277)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++ +++.+.|+.++ ++++++||+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~--------------~~~~~~d~~~~~~~~~~~~fD~ 104 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK--------------FNVVKSDAIEYLKSLPDKYLDG 104 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT--------------SEEECSCHHHHHHTSCTTCBSE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh--------------cceeeccHHHHhhhcCCCCeeE
Confidence 4678999999999999999988766 599999999999999865 46677777765 566789999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|++..+++|++++++..+++++.++|||||++++....
T Consensus 105 i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 105 VMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 99999999999888899999999999999999998654
No 48
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.75 E-value=1.5e-18 Score=148.56 Aligned_cols=104 Identities=20% Similarity=0.229 Sum_probs=92.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..++..+ .+|+++|+|+.|++.+++++... ..++.+.++|+.++++++++||+|
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v 108 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGV-------DRKVQVVQADARAIPLPDESVHGV 108 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTS-------CTTEEEEESCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhcc-------CCceEEEEcccccCCCCCCCeeEE
Confidence 4567899999999999999888764 46999999999999999997221 357999999999988878899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
++..++||++ +...+++++.++|||||++++.
T Consensus 109 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 9999999998 6779999999999999999987
No 49
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.75 E-value=3.1e-18 Score=147.03 Aligned_cols=107 Identities=12% Similarity=0.056 Sum_probs=85.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++++. +|+++|+|+.|++.|+++.... ....++...+.......+++||+|
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccEE
Confidence 45778999999999999999998765 6999999999999999998653 122333222221011114689999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+++.++||++.++...+++++.++| |||+++++..
T Consensus 115 v~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 115 LNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred EEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 9999999999888899999999999 9999999854
No 50
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.75 E-value=5.4e-18 Score=147.37 Aligned_cols=107 Identities=19% Similarity=0.196 Sum_probs=94.9
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..++..+. +|+++|+|+.+++.|++++...+ .++++.++|+.+++. +++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKEN-------LNISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCGGGCCC-CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcC-------CceEEEEeccccccc-cCCccEEEE
Confidence 568999999999999999998866 69999999999999999987642 268999999998776 579999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+.+++|+++++...+++++.++|||||++++.....
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 999999998889999999999999999988875543
No 51
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.74 E-value=1.7e-17 Score=139.37 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=96.9
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++....++.... ..++++.+.|+.++++++++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKT-GGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSS-SCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCcccc-CcceEEEEecccccCCCCCceeEEEE
Confidence 678999999999999999988755 6999999999999999998775442111 24689999999998887889999999
Q ss_pred chhhhcCCh-hhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 237 QWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 237 ~~~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
..+++|+++ .+...+++++.++|||||++++.+...
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 999999973 335589999999999999999987643
No 52
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.74 E-value=4.5e-18 Score=143.47 Aligned_cols=104 Identities=18% Similarity=0.250 Sum_probs=90.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|..+..+++.+. +|+++|+|+.|++.|+++.. ++.+.+.|+.++++ +++||+|+|
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP-----------DATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT-----------TCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC-----------CCEEEECCHHHccc-CCCCcEEEE
Confidence 567999999999999999988876 69999999999999998852 47889999998876 579999995
Q ss_pred -chhhhcCCh-hhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 237 -QWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 237 -~~~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
..+++|+++ ++...+++++.++|||||++++.+...+
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 459999953 5788999999999999999999875544
No 53
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=8.4e-18 Score=143.61 Aligned_cols=102 Identities=22% Similarity=0.329 Sum_probs=90.4
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||+|||+|.++..++... ..+|+++|+|+.|++.++++. .++.+.++|+.+++ ++++||+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~-~~~~fD~ 98 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----------PNTNFGKADLATWK-PAQKADL 98 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----------TTSEEEECCTTTCC-CSSCEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----------CCcEEEECChhhcC-ccCCcCE
Confidence 4567899999999999999998874 237999999999999999883 35889999999887 6689999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|+++.+++|++ +...+++++.++|||||++++.+.
T Consensus 99 v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 99 LYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 99999999998 677999999999999999999864
No 54
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.73 E-value=2.7e-18 Score=155.69 Aligned_cols=112 Identities=17% Similarity=0.169 Sum_probs=94.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHhCCC-----C-CCCCCCCcceeEEEcCCCCC--
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPE-----N-HMAPDMHKATNFFCVPLQDF-- 224 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~a~~~~~~~-----~-~~~~~~~~~~~~~~~d~~~~-- 224 (277)
..++.+|||||||+|.++..++... . .+|+|+|+|+.|++.|++++... | + ...+++|+++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~----~~~~v~~~~~d~~~l~~ 156 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSP----SRSNVRFLKGFIENLAT 156 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSST----TCCCEEEEESCTTCGGG
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhccccc----CCCceEEEEccHHHhhh
Confidence 3467899999999999999888764 2 28999999999999999986421 1 0 025799999999987
Q ss_pred ----CCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 225 ----TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 225 ----~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
++++++||+|+++.+++|++ +...++++++++|||||+|++.+...
T Consensus 157 ~~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 157 AEPEGVPDSSVDIVISNCVCNLST--NKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CBSCCCCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cccCCCCCCCEEEEEEccchhcCC--CHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 77788999999999999998 67799999999999999999987543
No 55
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.73 E-value=5.5e-18 Score=145.62 Aligned_cols=101 Identities=18% Similarity=0.144 Sum_probs=88.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++. +++|.+.|+.++++++++||+|
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------------~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP------------QVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT------------TEEEECCCTTSCCSCTTCBSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc------------CCEEEECchhhCCCCCCCEeEE
Confidence 35678999999999999999887544 7999999999999776542 6899999999998888899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++..+++|++ +...++++++++|| ||++++.+..
T Consensus 99 ~~~~~l~~~~--~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 99 ISILAIHHFS--HLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp EEESCGGGCS--SHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred EEcchHhhcc--CHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 9999999997 77799999999999 9988888754
No 56
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.5e-17 Score=145.64 Aligned_cols=105 Identities=19% Similarity=0.251 Sum_probs=91.2
Q ss_pred CCCccEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHhCCC-CCCCCCCCcceeEEEcCCCCCCCCC----
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPET---- 228 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~a~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~---- 228 (277)
.++.+|||||||+|..+..++... ..+|+|+|+|+.|++.|++++... +. ..+++++++|+.++++++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT-----YKNVSFKISSSDDFKFLGADSV 109 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C-----CTTEEEEECCTTCCGGGCTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC-----CCceEEEEcCHHhCCccccccc
Confidence 367899999999999999998743 448999999999999999987653 11 357999999999988766
Q ss_pred --CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 229 --GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 229 --~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
++||+|+++.++||+ +...+++++.++|||||.|++.
T Consensus 110 ~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEE
Confidence 799999999999999 5669999999999999999984
No 57
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.73 E-value=3.6e-18 Score=150.09 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=85.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC------C--CCCC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD------F--TPET 228 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~------~--~~~~ 228 (277)
++.+|||||||+|..+..++..+..+|+|+|+|+.|++.|+++....+........+++|.+.|+.. + ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4689999999999866666666656799999999999999998754321000000136677887722 2 2345
Q ss_pred CceeEEecchhhhcC-ChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 229 GRYDVIWVQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~-~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++||+|+|..++||+ ..++...++++++++|||||+|+++..
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 799999999999986 334677999999999999999998754
No 58
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.73 E-value=3.9e-17 Score=147.03 Aligned_cols=111 Identities=14% Similarity=0.218 Sum_probs=98.0
Q ss_pred CCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC--CCCCCceeE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~ 233 (277)
...+|||||||+|..+..+++.++. +++++|+ +.+++.|++++...++ ..++++..+|+.+. +++ ++||+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~p-~~~D~ 251 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG-----SERIHGHGANLLDRDVPFP-TGFDA 251 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT-----GGGEEEEECCCCSSSCCCC-CCCSE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc-----ccceEEEEccccccCCCCC-CCcCE
Confidence 5679999999999999999987765 8999999 9999999999887554 46799999999886 344 68999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (277)
|++..++|++++++...++++++++|||||++++.|.+.++
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp EEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred EEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 99999999999888889999999999999999999976543
No 59
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.73 E-value=6.3e-18 Score=147.28 Aligned_cols=112 Identities=17% Similarity=0.200 Sum_probs=92.1
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC---CCCCcee
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETGRYD 232 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD 232 (277)
.++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|+++....+.. ....++.+..+|+.+++ +++++||
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKE--PAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTS--HHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccc--cccceeeEeecChhhCccccccCCCeE
Confidence 3568999999999999999998866 6999999999999999876321110 00245778888888776 6678999
Q ss_pred EEecc-hhhhcCCh-----hhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 233 VIWVQ-WCIGHLTD-----DDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~-~~l~~~~~-----~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+|++. .+++|+++ ++...++++++++|||||++++...
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 99998 89999996 5588999999999999999998753
No 60
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.73 E-value=1.2e-17 Score=145.91 Aligned_cols=113 Identities=20% Similarity=0.276 Sum_probs=90.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCC-----------------------------
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHM----------------------------- 206 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~----------------------------- 206 (277)
++.+|||||||+|.++..++.... .+|+|+|+|+.|++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 568999999999999999998753 48999999999999999987653211
Q ss_pred -----------------------CCCCCcceeEEEcCCCCCC-----CCCCceeEEecchhhhcC----ChhhHHHHHHH
Q 023787 207 -----------------------APDMHKATNFFCVPLQDFT-----PETGRYDVIWVQWCIGHL----TDDDFVSFFKR 254 (277)
Q Consensus 207 -----------------------~~~~~~~~~~~~~d~~~~~-----~~~~~fD~Vi~~~~l~~~----~~~d~~~~l~~ 254 (277)
......++.|.++|+.... +.+++||+|+|..+++|+ +++++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0011247999999998654 456899999999999887 56678899999
Q ss_pred HHhcCCCCcEEEEEe
Q 023787 255 AKVGLKPGGFFVLKE 269 (277)
Q Consensus 255 ~~r~LkpGG~lii~e 269 (277)
++++|||||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999863
No 61
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.73 E-value=3.8e-18 Score=146.93 Aligned_cols=118 Identities=15% Similarity=0.080 Sum_probs=89.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCC-CC------------C----------CC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM-AP------------D----------MH 211 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~-~~------------~----------~~ 211 (277)
..++.+|||||||+|..+..++..++.+|+|+|+|+.|++.|++++...... .. . ..
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 4467899999999998877666666667999999999999999886542100 00 0 00
Q ss_pred ccee-EEEcCCCCC-CC---CCCceeEEecchhhhcCC--hhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 212 KATN-FFCVPLQDF-TP---ETGRYDVIWVQWCIGHLT--DDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 212 ~~~~-~~~~d~~~~-~~---~~~~fD~Vi~~~~l~~~~--~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
.++. +.++|+.+. ++ ..++||+|++++++||+. .+++..++++++++|||||+|++++...
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~ 200 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLR 200 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 1233 888998874 32 246899999999999863 3577899999999999999999997543
No 62
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.72 E-value=1.7e-17 Score=145.74 Aligned_cols=112 Identities=16% Similarity=0.035 Sum_probs=94.6
Q ss_pred CCCCccEEEeeccccHHHHHHH-HhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLL-IRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~-~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||||||+|..+..++ ...+ .+|+++|+|+.+++.|++++...+. ..+++++++|+.+++++ ++||
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~fD 189 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL-----AGQITLHRQDAWKLDTR-EGYD 189 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEECCGGGCCCC-SCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECchhcCCcc-CCeE
Confidence 3467899999999999999874 2332 3899999999999999999987655 45699999999998877 8999
Q ss_pred EEecchhhhcCChh-hHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 233 VIWVQWCIGHLTDD-DFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~-d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+|+++.+++|+++. ....+++++.++|||||++++.+...
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 190 LLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred EEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 99999999999733 34458999999999999999987554
No 63
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.72 E-value=3.6e-17 Score=134.70 Aligned_cols=105 Identities=24% Similarity=0.240 Sum_probs=89.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++ +|||+|||+|..+..++..+. +|+++|+|+.|++.|+++....+ .++.+.+.|+.++++++++||+|++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKG-------VKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHT-------CCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcC-------CceEEEEcChhhcCCCcCCccEEEE
Confidence 44 999999999999998887655 79999999999999999876431 2588999999988877789999998
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+ +.|++.++...+++++.++|||||++++.+...
T Consensus 101 ~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 101 I--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp E--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred E--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 5 356676788899999999999999999987543
No 64
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=2.3e-17 Score=142.97 Aligned_cols=102 Identities=19% Similarity=0.230 Sum_probs=89.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..++..+. +|+|+|+|+.|++.++++. .++.+.++|+.++++ +++||+|
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~-~~~fD~v 121 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY-----------PHLHFDVADARNFRV-DKPLDAV 121 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----------TTSCEEECCTTTCCC-SSCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC-----------CCCEEEECChhhCCc-CCCcCEE
Confidence 34678999999999999999887443 7999999999999999875 247889999999887 4799999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++..+++|++ +...+++++.++|||||++++....
T Consensus 122 ~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 122 FSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999999998 6779999999999999999998654
No 65
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.72 E-value=1.8e-17 Score=134.67 Aligned_cols=121 Identities=11% Similarity=0.021 Sum_probs=90.0
Q ss_pred HHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE
Q 023787 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (277)
Q Consensus 139 ~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 218 (277)
..+...++... ..++.+|||+|||+|..+..+++. ..+|+|+|+|+.|++.|++++...++ .++++++
T Consensus 9 ~~~~~~~l~~~-----~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~ 76 (185)
T 3mti_A 9 IHMSHDFLAEV-----LDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI------ENTELIL 76 (185)
T ss_dssp HHHHHHHHHTT-----CCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC------CCEEEEE
T ss_pred HHHHHHHHHHh-----CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEe
Confidence 34444445433 336789999999999999998876 45799999999999999999875433 4688888
Q ss_pred cCCCCCC-CCCCceeEEecchhhhcC-------ChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 219 VPLQDFT-PETGRYDVIWVQWCIGHL-------TDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 219 ~d~~~~~-~~~~~fD~Vi~~~~l~~~-------~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
.+..++. +.+++||+|+++....+. ...+...+++++.++|||||++++....
T Consensus 77 ~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 77 DGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp SCGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 7777643 335789999987432221 2245678899999999999999997653
No 66
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.72 E-value=7.2e-18 Score=147.25 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=82.5
Q ss_pred CCCccEEEeeccccHHHHHH----HHhCCC-c--EEEEeCCHHHHHHHHHHhCCC-CCCCCCCCcceeEEEcCCCCCC--
Q 023787 156 NQHLVALDCGSGIGRITKNL----LIRYFN-E--VDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFT-- 225 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l----~~~~~~-~--v~gvD~S~~~l~~a~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~-- 225 (277)
.++.+|||||||+|.++..+ +..++. . ++++|+|+.|++.|++++... ++. ..+..+...+..+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~----~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE----NVKFAWHKETSSEYQSR 126 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT----TEEEEEECSCHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC----cceEEEEecchhhhhhh
Confidence 46679999999999876543 333332 2 399999999999999987542 110 112344455554432
Q ss_pred ----CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 226 ----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 226 ----~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+++++||+|++..++||++ |+..++++++++|||||++++.+..
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hccccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEec
Confidence 4568999999999999999 6779999999999999999998654
No 67
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.72 E-value=3.6e-17 Score=143.12 Aligned_cols=110 Identities=24% Similarity=0.331 Sum_probs=92.3
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||||||+|.++..++..+. +|+++|+|+.|++.|++++...+.. ...+++++++|+.++++ +++||+|++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~---~~~~v~~~~~d~~~~~~-~~~fD~v~~ 156 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPAD---VRDRCTLVQGDMSAFAL-DKRFGTVVI 156 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHH---HHTTEEEEECBTTBCCC-SCCEEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccc---cccceEEEeCchhcCCc-CCCcCEEEE
Confidence 345999999999999999987765 5999999999999999998763210 01468999999999887 579999885
Q ss_pred c-hhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 237 Q-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 237 ~-~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
. .+++|+++++...+++++.++|||||+|++....
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 157 SSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 4 6788888778899999999999999999998644
No 68
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.71 E-value=6.9e-17 Score=143.50 Aligned_cols=112 Identities=14% Similarity=0.093 Sum_probs=96.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..+..+|||+|||+|..+..+++.++. +++++|+ +.+++.|++++...++ ..+++|...|+. .+.+. +||+
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~-~~~p~-~~D~ 238 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL-----SGRAQVVVGSFF-DPLPA-GAGG 238 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTT-SCCCC-SCSE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc-----CcCeEEecCCCC-CCCCC-CCcE
Confidence 345689999999999999999988765 7999999 9999999998876544 467999999997 34443 8999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (277)
|++.+++||+++++...++++++++|+|||++++.|.+.++
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 99999999999887899999999999999999999987543
No 69
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.71 E-value=6.6e-17 Score=140.12 Aligned_cols=108 Identities=19% Similarity=0.165 Sum_probs=90.5
Q ss_pred CCccEEEeeccc---cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 157 QHLVALDCGSGI---GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 157 ~~~~VLDiGcGt---G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
...+|||||||+ |.++..+.+..+. +|+++|+|+.|++.|++++.. ..+++|+++|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--------~~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK--------DPNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT--------CTTEEEEECCTTCHHHHHHSHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC--------CCCeEEEEeeCCCchhhhccch
Confidence 347999999999 9888766555443 899999999999999999854 356899999997631
Q ss_pred ----CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 226 ----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 226 ----~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
++..+||+|++..++||+++++...++++++++|+|||+|++.+...
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 22248999999999999997678899999999999999999998654
No 70
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.71 E-value=1.1e-17 Score=134.02 Aligned_cols=102 Identities=18% Similarity=0.129 Sum_probs=88.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++. .++++...| .++++++||+|
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----------~~v~~~~~d---~~~~~~~~D~v 79 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKF-----------DSVITLSDP---KEIPDNSVDFI 79 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHC-----------TTSEEESSG---GGSCTTCEEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhC-----------CCcEEEeCC---CCCCCCceEEE
Confidence 34678999999999999998887765 7999999999999999982 357888888 55667899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
++..+++|++ +...+++++.++|||||++++.+....
T Consensus 80 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 80 LFANSFHDMD--DKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp EEESCSTTCS--CHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEccchhccc--CHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 9999999998 677999999999999999999976543
No 71
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.71 E-value=1.2e-17 Score=141.19 Aligned_cols=103 Identities=20% Similarity=0.365 Sum_probs=90.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|..+..+++.+. +++++|+|+.|++.++++....+ .++.+.++|+.+++++ ++||+|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~~-~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQG-------LKPRLACQDISNLNIN-RKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTT-------CCCEEECCCGGGCCCS-CCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcC-------CCeEEEecccccCCcc-CCceEEEE
Confidence 668999999999999998887755 69999999999999999876532 2588999999888776 79999999
Q ss_pred ch-hhhcCC-hhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 237 QW-CIGHLT-DDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 237 ~~-~l~~~~-~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.. +++|++ .++...+++++.++|||||++++.
T Consensus 108 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 108 CLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 98 999994 357889999999999999999985
No 72
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=1.8e-17 Score=141.23 Aligned_cols=117 Identities=22% Similarity=0.344 Sum_probs=94.9
Q ss_pred HHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE
Q 023787 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (277)
Q Consensus 139 ~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 218 (277)
..++..++.... ..++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++....+ .++.+++
T Consensus 27 ~~~~~~~~~~~~----~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~-------~~v~~~~ 94 (252)
T 1wzn_A 27 IDFVEEIFKEDA----KREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERN-------LKIEFLQ 94 (252)
T ss_dssp HHHHHHHHHHTC----SSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-------CCCEEEE
T ss_pred HHHHHHHHHHhc----ccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcC-------CceEEEE
Confidence 344555554321 34568999999999999999988765 69999999999999999876532 3588999
Q ss_pred cCCCCCCCCCCceeEEecch-hhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 219 VPLQDFTPETGRYDVIWVQW-CIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 219 ~d~~~~~~~~~~fD~Vi~~~-~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+|+.+++++ ++||+|++.. .+++++.++...+++++.++|||||.+++.
T Consensus 95 ~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 95 GDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 999887765 6899999874 567777778899999999999999999875
No 73
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=1.2e-16 Score=129.99 Aligned_cols=102 Identities=20% Similarity=0.188 Sum_probs=90.9
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..++..+. +++++|+|+.+++.++++.. ++.+.+.|+.++++++++||+|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFP-----------EARWVVGDLSVDQISETDFDLIVS 113 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTSCCCCCCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCC-----------CCcEEEcccccCCCCCCceeEEEE
Confidence 678999999999999999887754 69999999999999999863 378899999988777789999999
Q ss_pred c-hhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 237 Q-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 237 ~-~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
. .+++|++.++...+++++.++|+|||.+++...
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 8 789999877888999999999999999999754
No 74
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.69 E-value=4.8e-17 Score=137.46 Aligned_cols=102 Identities=22% Similarity=0.274 Sum_probs=88.2
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|..+..++.. .+|+++|+|+.|++.|+++.... ..++++.+.|+.+++++ ++||+|++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMET-------NRHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhc-------CCceEEEEcChhhcCCC-CCcCEEEE
Confidence 4589999999999999988766 57999999999999999987643 23588999999888766 79999999
Q ss_pred ch-hhhcC-ChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 237 QW-CIGHL-TDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 237 ~~-~l~~~-~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.. +++|+ +.++...+++++.++|||||++++.
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 86 99998 4567889999999999999999984
No 75
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.69 E-value=3.5e-16 Score=141.13 Aligned_cols=112 Identities=21% Similarity=0.277 Sum_probs=97.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..+..+|||||||+|..+..+++.++. +++++|+ +.+++.|++++...++ ..+++|...|+. .+.+. +||+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l-----~~~v~~~~~d~~-~~~p~-~~D~ 271 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL-----ADRCEILPGDFF-ETIPD-GADV 271 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTT-TCCCS-SCSE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc-----CCceEEeccCCC-CCCCC-CceE
Confidence 456789999999999999999988765 8999999 9999999998876544 467999999998 34443 8999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (277)
|++..++|++++++...++++++++|+|||++++.|.+.++
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999999999888889999999999999999999987554
No 76
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.69 E-value=1.2e-16 Score=141.86 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=96.6
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.++.+|||+|||+|..+..+++..+. +++++|+| .+++.|++++...++ ..++++...|+.+.+++. .||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~-~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV-----ASRYHTIAGSAFEVDYGN-DYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC-----GGGEEEEESCTTTSCCCS-CEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC-----CcceEEEecccccCCCCC-CCcEE
Confidence 46789999999999999999988644 89999999 999999998765443 346999999998876654 49999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
++.+++||+++++...++++++++|+|||++++.|...+
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred EEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 999999999988889999999999999999999987654
No 77
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.69 E-value=2.6e-17 Score=140.89 Aligned_cols=116 Identities=17% Similarity=0.217 Sum_probs=91.1
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCC--------------C-CC--------CCc
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM--------------A-PD--------MHK 212 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~--------------~-~~--------~~~ 212 (277)
.++.+|||+|||+|..+..++..++.+|+++|+|+.|++.+++++...+.. + .. ...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 466899999999999999887666657999999999999999988653200 0 00 001
Q ss_pred ce-eEEEcCCCCCCC-CC---CceeEEecchhhhcCCh--hhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 213 AT-NFFCVPLQDFTP-ET---GRYDVIWVQWCIGHLTD--DDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 213 ~~-~~~~~d~~~~~~-~~---~~fD~Vi~~~~l~~~~~--~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++ .+.++|+.+..+ ++ ++||+|++..++++++. ++...+++++.++|||||++++.+..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 26 889999988643 44 79999999999995543 27889999999999999999998754
No 78
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.68 E-value=3.1e-17 Score=142.85 Aligned_cols=114 Identities=14% Similarity=0.174 Sum_probs=83.7
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCC------------C------------CCc
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAP------------D------------MHK 212 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~------------~------------~~~ 212 (277)
++.+|||||||+|..+..++.....+|+|+|+|+.|++.|++++........ . ...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 5689999999999955433333345899999999999999987654210000 0 001
Q ss_pred ceeEEEcCCCC-CCC-----CCCceeEEecchhhhcCChh--hHHHHHHHHHhcCCCCcEEEEEec
Q 023787 213 ATNFFCVPLQD-FTP-----ETGRYDVIWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 213 ~~~~~~~d~~~-~~~-----~~~~fD~Vi~~~~l~~~~~~--d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.+.++.+|+.+ .++ ++++||+|+++.+++|+... ++..++++++++|||||+|++.+.
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 14567778877 442 34679999999999996533 788999999999999999999854
No 79
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.68 E-value=5.9e-17 Score=132.36 Aligned_cols=109 Identities=13% Similarity=0.047 Sum_probs=91.2
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CCCCceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~ 233 (277)
.++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++...++ .+++++++|+.++. +++++||+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~fD~ 116 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL------SGATLRRGAVAAVVAAGTTSPVDL 116 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC------SCEEEEESCHHHHHHHCCSSCCSE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC------CceEEEEccHHHHHhhccCCCccE
Confidence 36689999999999999988877766899999999999999999876433 46899999987764 33579999
Q ss_pred EecchhhhcCChhhHHHHHHHHHh--cCCCCcEEEEEecC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKENI 271 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r--~LkpGG~lii~e~~ 271 (277)
|+++..+++. .++...+++++.+ +|+|||++++....
T Consensus 117 i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 117 VLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp EEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 9999887764 2477899999999 99999999997543
No 80
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.68 E-value=1.5e-16 Score=137.13 Aligned_cols=111 Identities=12% Similarity=-0.032 Sum_probs=91.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHH------HHHHHHHHhCCCCCCCCCCCcceeEEEcC---CCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSH------FLDAARESLAPENHMAPDMHKATNFFCVP---LQD 223 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~------~l~~a~~~~~~~~~~~~~~~~~~~~~~~d---~~~ 223 (277)
..++.+|||||||+|.++..++..+ + .+|+|+|+|+. |++.|++++...++ ..++++...| ...
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL-----GDRLTVHFNTNLSDDL 115 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT-----GGGEEEECSCCTTTCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC-----CCceEEEECChhhhcc
Confidence 4577899999999999999999874 4 48999999997 99999999876544 3578999998 344
Q ss_pred CCCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 224 FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 224 ~~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+++++++||+|++..+++|+++. ..+++.+.++++|||++++.+...
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CCCCCCCEEEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEEEecC
Confidence 45566899999999999999844 467888888888899999988654
No 81
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.68 E-value=1.5e-16 Score=142.40 Aligned_cols=111 Identities=21% Similarity=0.260 Sum_probs=96.3
Q ss_pred CccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-CCCceeEEe
Q 023787 158 HLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVIW 235 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~fD~Vi 235 (277)
+.+|||||||+|.++..+++.++. +++++|+ +.+++.+++++...++ ..++++..+|+.+.+. .++.||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL-----GGRVEFFEKNLLDARNFEGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-----GGGEEEEECCTTCGGGGTTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC-----CCceEEEeCCcccCcccCCCCccEEE
Confidence 789999999999999999988765 8999999 8899999998766444 4579999999988751 235799999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (277)
+..++||+++++...++++++++|||||++++.|.+.++
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 254 LNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred EecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999999999888899999999999999999999976543
No 82
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.67 E-value=2.4e-16 Score=135.19 Aligned_cols=100 Identities=23% Similarity=0.322 Sum_probs=85.3
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||||||+|.++..+++.+. +|+++|+|+.|++.|+++... .+.+.|+.++++++++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~------------~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK------------NVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS------------CEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC------------CEEECcHHHCCCCCCCEEEEEE
Confidence 567999999999999998887655 699999999999999988642 2788999988887789999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
..+++|+.+ +...+++++.++|||||++++...
T Consensus 121 ~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 121 LGDVLSYVE-NKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CSSHHHHCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhhccc-cHHHHHHHHHHHcCCCeEEEEEeC
Confidence 886666532 477999999999999999998753
No 83
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.67 E-value=4e-16 Score=140.10 Aligned_cols=111 Identities=15% Similarity=0.192 Sum_probs=96.1
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||||||+|..+..+++.++. +++++|+ +.+++.|++++...++ ..++++..+|+.+.++++ +|+
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~--~D~ 259 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV-----ADRMRGIAVDIYKESYPE--ADA 259 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-----TTTEEEEECCTTTSCCCC--CSE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC-----CCCEEEEeCccccCCCCC--CCE
Confidence 456789999999999999999988654 7999999 9999999998865443 346999999998876654 499
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
|++..++|++++++...++++++++|||||++++.|.+.+
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred EEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 9999999999987789999999999999999999987654
No 84
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.67 E-value=7e-16 Score=127.37 Aligned_cols=105 Identities=16% Similarity=0.139 Sum_probs=88.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||+|||+|.++..++..++ .+|+++|+|+.+++.|++++...++ .++++++.|+.+.....++||+
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~D~ 111 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA------RNVTLVEAFAPEGLDDLPDPDR 111 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC------TTEEEEECCTTTTCTTSCCCSE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC------CcEEEEeCChhhhhhcCCCCCE
Confidence 45778999999999999999998874 3899999999999999998865432 4689999999766544468999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|++..+++ +...+++++.++|||||++++...
T Consensus 112 i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 112 VFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp EEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 99998765 556899999999999999999754
No 85
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.67 E-value=1.5e-16 Score=140.20 Aligned_cols=114 Identities=13% Similarity=0.144 Sum_probs=90.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCC-CCCCCcceeEEEcCCCCCC----CC--CC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM-APDMHKATNFFCVPLQDFT----PE--TG 229 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~----~~--~~ 229 (277)
++.+|||+|||+|..+..++.....+|+++|+|+.|++.|+++....+.. ......++.++++|+.+.+ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 56799999999999999888765558999999999999999987531100 0000246899999998875 42 45
Q ss_pred ceeEEecchhhhcC--ChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 230 RYDVIWVQWCIGHL--TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~--~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+||+|+++.++||+ +.++...+++++.++|||||+++++..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 89999999999998 445678999999999999999999754
No 86
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.66 E-value=2.3e-16 Score=142.18 Aligned_cols=115 Identities=15% Similarity=0.018 Sum_probs=91.4
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhC-------CCCCCCCCCCcceeEEEcCCCCCCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLA-------PENHMAPDMHKATNFFCVPLQDFTP 226 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~ 226 (277)
..++.+|||||||+|.++..++..... +|+|||+|+.|++.|+++.. ..++. ..+++|+++|+.+.++
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~----~~rVefi~GD~~~lp~ 246 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK----HAEYTLERGDFLSEEW 246 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC----CCEEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC----CCCeEEEECcccCCcc
Confidence 567889999999999999988866444 59999999999999987532 11110 1479999999998775
Q ss_pred CC--CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCCCCC
Q 023787 227 ET--GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSDI 276 (277)
Q Consensus 227 ~~--~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~~~ 276 (277)
.+ ..||+|+++..++ . ++....|.++.+.|||||+|++.|.+.+.++
T Consensus 247 ~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 247 RERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp HHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTTC
T ss_pred ccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCCC
Confidence 43 4799999987753 2 4777899999999999999999998876554
No 87
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.66 E-value=4e-16 Score=140.66 Aligned_cols=108 Identities=18% Similarity=0.231 Sum_probs=93.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||||||+|.++..+++.++. +++++|+ +.+++.|++++...++ ..++++..+|+.+ +.+ ..||+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~ 251 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL-----ADRVTVAEGDFFK-PLP-VTADV 251 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCS-CCEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCC-cCC-CCCCE
Confidence 346789999999999999999988754 8999999 9999999998866443 3479999999876 333 34999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|++..++||+++++...++++++++|||||++++.|.
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999999999987778999999999999999999998
No 88
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.66 E-value=3.7e-16 Score=125.73 Aligned_cols=105 Identities=17% Similarity=0.086 Sum_probs=84.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC-CCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD 232 (277)
..++.+|||+|||+|.++..++...+ .+|+++|+|+.+++.|++++...+. ..++ +++.|..+ ++..+++||
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~-~~~~d~~~~~~~~~~~~D 96 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV-----SDRI-AVQQGAPRAFDDVPDNPD 96 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC-----TTSE-EEECCTTGGGGGCCSCCS
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC-----CCCE-EEecchHhhhhccCCCCC
Confidence 45778999999999999998887753 3899999999999999999876554 2357 77777754 232227899
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+|++..++++ ..+++++.++|||||++++.+..
T Consensus 97 ~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 97 VIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp EEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred EEEECCcccH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 9999999987 37999999999999999997653
No 89
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.66 E-value=5.9e-16 Score=126.96 Aligned_cols=110 Identities=12% Similarity=0.006 Sum_probs=89.4
Q ss_pred CCCccEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCcee
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD 232 (277)
.++.+|||+|||+|..+..+++.. + .+|+++|+|+.+++.|++++...++ ..+++++++|+.+++ ..+++||
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD 95 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL-----IDRVTLIKDGHQNMDKYIDCPVK 95 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC-----GGGEEEECSCGGGGGGTCCSCEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHhhhccCCce
Confidence 467899999999999999998773 2 3899999999999999999876544 357999999988775 4557999
Q ss_pred EEecchhhh-------cCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 233 VIWVQWCIG-------HLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~~~l~-------~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+|+++..+. ....++...+++++.++|||||++++...
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 999887551 11233556799999999999999999864
No 90
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.66 E-value=4.5e-17 Score=135.91 Aligned_cols=100 Identities=23% Similarity=0.307 Sum_probs=82.3
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC---CCC-CCce
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE-TGRY 231 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~-~~~f 231 (277)
.++.+|||+|||+|.++..++..+. +|+++|+|+.|++.++++ .++.+...++.++ ++. .++|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------------~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA------------GAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT------------CSSCEEECCHHHHHTTCSCCCCCE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh------------cccccchhhHHhhcccccccCCCc
Confidence 3568999999999999998887755 699999999999999987 1245666666555 333 3469
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|+|++..+++ .. +...+++++.++|||||++++.+..
T Consensus 118 D~v~~~~~l~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 118 DLICANFALL-HQ--DIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp EEEEEESCCC-SS--CCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEECchhh-hh--hHHHHHHHHHHHhCCCeEEEEEecC
Confidence 9999999998 55 6669999999999999999998764
No 91
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.66 E-value=6.1e-16 Score=149.02 Aligned_cols=113 Identities=15% Similarity=0.156 Sum_probs=93.1
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.|++++............+++|+++|+.++++.+++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 3678999999999999998887763 47999999999999999865421000000125799999999999988889999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|++..+++|++++....+++++.++|||| .++++.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 99999999999877778999999999999 777764
No 92
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.65 E-value=2.8e-16 Score=136.49 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=84.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||||||+|.++..++.+ ...+|+++|+|+.|++.|++++...++ .+++|+++|+.+++ +++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl------~~v~~v~gDa~~l~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV------DGVNVITGDETVID--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC------CSEEEEESCGGGGG--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC------CCeEEEECchhhCC--CCCcCE
Confidence 678899999999999776555444 334899999999999999999876443 46899999998875 579999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|++... .+ +...+++++.++|||||+|++.+.
T Consensus 192 V~~~a~---~~--d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 192 LMVAAL---AE--PKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEECTT---CS--CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEECCC---cc--CHHHHHHHHHHHcCCCcEEEEEcC
Confidence 998655 34 677999999999999999999763
No 93
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.65 E-value=1.6e-16 Score=131.30 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=87.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC--CCCc-eeE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGR-YDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~-fD~ 233 (277)
++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++...++. ..+++++++|+.++.. .+++ ||+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS----SEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC----TTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC----ccceEEEECCHHHHHHhhccCCCCCE
Confidence 45799999999999999888787778999999999999999998765430 0468999999876532 2568 999
Q ss_pred EecchhhhcCChhhHHHHHHHH--HhcCCCCcEEEEEecC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRA--KVGLKPGGFFVLKENI 271 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~--~r~LkpGG~lii~e~~ 271 (277)
|++...++ .. +...+++.+ .++|+|||++++..+.
T Consensus 129 I~~~~~~~-~~--~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 129 VFLDPPFH-FN--LAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EEECCCSS-SC--HHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred EEECCCCC-Cc--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 99988854 33 666888888 6789999999997654
No 94
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.65 E-value=4.3e-16 Score=130.15 Aligned_cols=100 Identities=17% Similarity=0.198 Sum_probs=85.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC--CCCCCCceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD--FTPETGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~fD~ 233 (277)
.++.+|||+|||+|..+..++.. ..+++++|+|+.+++.++++. .++...|+.+ .++++++||+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~-------------~~~~~~d~~~~~~~~~~~~fD~ 96 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL-------------DHVVLGDIETMDMPYEEEQFDC 96 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS-------------SEEEESCTTTCCCCSCTTCEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC-------------CcEEEcchhhcCCCCCCCccCE
Confidence 36689999999999999988877 468999999999999998754 2567888876 4556689999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|++..+++|++ +...+++++.++|+|||++++....
T Consensus 97 v~~~~~l~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 97 VIFGDVLEHLF--DPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEESCGGGSS--CHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred EEECChhhhcC--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99999999998 5569999999999999999998643
No 95
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.65 E-value=5.5e-16 Score=134.04 Aligned_cols=115 Identities=17% Similarity=0.174 Sum_probs=88.0
Q ss_pred CCccEEEeeccccH----HHHHHHHhCC-----CcEEEEeCCHHHHHHHHHHhCCC----CC---------------CCC
Q 023787 157 QHLVALDCGSGIGR----ITKNLLIRYF-----NEVDLLEPVSHFLDAARESLAPE----NH---------------MAP 208 (277)
Q Consensus 157 ~~~~VLDiGcGtG~----~s~~l~~~~~-----~~v~gvD~S~~~l~~a~~~~~~~----~~---------------~~~ 208 (277)
++.+|||+|||||. ++..+++... .+|+|+|+|+.|++.|++..-.. ++ .+.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 5555555412 27999999999999999874110 00 000
Q ss_pred ------CCCcceeEEEcCCCCCCCC-CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE--ecC
Q 023787 209 ------DMHKATNFFCVPLQDFTPE-TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK--ENI 271 (277)
Q Consensus 209 ------~~~~~~~~~~~d~~~~~~~-~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~--e~~ 271 (277)
....++.|.+.|+.+.+++ .++||+|+|.++++|++++....+++++++.|+|||+|++. |.+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE~~ 256 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSENF 256 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTCCC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecccc
Confidence 0013689999999886554 47899999999999999888889999999999999999984 554
No 96
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.65 E-value=1.3e-16 Score=133.63 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=87.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-C--CCCCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T--PETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--~~~~~fD 232 (277)
++.+|||||||+|.++..++...+. .|+|+|+|+.|++.|+++....++ .++.++++|+.++ + +++++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l------~nv~~~~~Da~~~l~~~~~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL------SNLRVMCHDAVEVLHKMIPDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC------SSEEEECSCHHHHHHHHSCTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC------CcEEEEECCHHHHHHHHcCCCChh
Confidence 5679999999999999999988765 799999999999999999866543 4689999998774 2 5678999
Q ss_pred EEecchhhhcCChhhH------HHHHHHHHhcCCCCcEEEEEec
Q 023787 233 VIWVQWCIGHLTDDDF------VSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~------~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.|++++...+...... ..+++++.++|||||+|++..+
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 9998865443322221 2599999999999999999754
No 97
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.65 E-value=6.3e-16 Score=137.98 Aligned_cols=104 Identities=16% Similarity=0.143 Sum_probs=88.4
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++.+..+|+|+|+|+ |++.|++++...++ ..+++++.+|+.++++++++||+|
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~D~I 135 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKL-----EDTITLIKGKIEEVHLPVEKVDVI 135 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTSCCSCSCEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCC-----CCcEEEEEeeHHHhcCCCCcEEEE
Confidence 346789999999999999988887666899999996 99999999876554 357999999999988777899999
Q ss_pred ecch---hhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 235 WVQW---CIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 235 i~~~---~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
++.+ .+.+.. ++..++.++.++|||||+++
T Consensus 136 vs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 136 ISEWMGYFLLFES--MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EECCCBTTBTTTC--HHHHHHHHHHHHEEEEEEEE
T ss_pred EEcCchhhccCHH--HHHHHHHHHHhhcCCCcEEE
Confidence 9877 344444 67789999999999999998
No 98
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.64 E-value=5.4e-16 Score=137.75 Aligned_cols=107 Identities=18% Similarity=0.215 Sum_probs=92.9
Q ss_pred ccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecc
Q 023787 159 LVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (277)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~ 237 (277)
.+|||+|||+|..+..+++.++. +++++|+ +.+++.|++++...++ ..++++...|+.+ +.+ ++||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA-----GERVSLVGGDMLQ-EVP-SNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH-----TTSEEEEESCTTT-CCC-SSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC-----CCcEEEecCCCCC-CCC-CCCCEEEEc
Confidence 89999999999999999988654 8999999 9999999998754322 2468999999987 444 689999999
Q ss_pred hhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
.++||+++++...++++++++|+|||++++.|.+.+
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 999999988888999999999999999999998654
No 99
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.64 E-value=1.4e-16 Score=133.89 Aligned_cols=92 Identities=13% Similarity=0.124 Sum_probs=78.6
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCC-CCCCCC-CCceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFTPE-TGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~-~~~fD~ 233 (277)
.++.+|||+|||+|.++..++..+. +|+++|+|+.|++.++++. .+++++++|+ ..++++ +++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANA-----------PHADVYEWNGKGELPAGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHC-----------TTSEEEECCSCSSCCTTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhC-----------CCceEEEcchhhccCCcCCCCEEE
Confidence 3678999999999999999887754 6999999999999999982 3588999999 566766 789999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
|+++ . +...+++++.++|||||+++.
T Consensus 115 v~~~------~--~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 115 IVSR------R--GPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEE------S--CCSGGGGGHHHHEEEEEEEEE
T ss_pred EEeC------C--CHHHHHHHHHHHcCCCcEEEE
Confidence 9987 1 344799999999999999983
No 100
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.64 E-value=7.4e-16 Score=128.32 Aligned_cols=107 Identities=16% Similarity=0.197 Sum_probs=87.4
Q ss_pred CCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CCCCceeE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~ 233 (277)
++.+|||||||+|.++..++...+. +++|+|+|+.+++.|++++...++ .++.++++|+.+++ +++++||+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~D~ 114 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV------PNIKLLWVDGSDLTDYFEDGEIDR 114 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------SSEEEEECCSSCGGGTSCTTCCSE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCCCCCCE
Confidence 5678999999999999999988654 899999999999999998865433 46899999998876 66689999
Q ss_pred EecchhhhcCChh------hHHHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~~~~l~~~~~~------d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+++....+.... ....+++++.++|+|||++++..
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 9998764332211 13579999999999999999864
No 101
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.64 E-value=1.6e-15 Score=125.75 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=85.1
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.|++.|++++...++ ..+++++++|+.+......+||+|
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~~~~~~~~D~v 126 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGL-----SPRMRAVQGTAPAALADLPLPEAV 126 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCTTGGGTTSCCCSEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC-----CCCEEEEeCchhhhcccCCCCCEE
Confidence 456789999999999999999877 55799999999999999999876544 236899999998843333589999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++...+ +.. +++++.++|||||++++...
T Consensus 127 ~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 127 FIGGGG------SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp EECSCC------CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred EECCcc------cHH-HHHHHHHhcCCCcEEEEEec
Confidence 987744 344 99999999999999999754
No 102
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.64 E-value=6.8e-16 Score=127.86 Aligned_cols=102 Identities=19% Similarity=0.085 Sum_probs=87.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|..+..+++.+ .+|+++|+|+.+++.|++++...++ .++++..+|+.+...++++||+|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDL------HNVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCC------CceEEEECCcccCCccCCCccEE
Confidence 4577899999999999999998774 4799999999999999999876543 36899999998866566799999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++..+++|+++ ++.+.|||||++++.-..
T Consensus 148 ~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 99999999883 478999999999997543
No 103
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.64 E-value=4.7e-16 Score=129.74 Aligned_cols=107 Identities=12% Similarity=0.236 Sum_probs=85.8
Q ss_pred CCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CCCCceeE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~ 233 (277)
++.+|||||||+|.++..++...+. +|+|+|+|+.|++.|++++...++ .++.++++|+.+++ +++++||.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~------~nv~~~~~d~~~l~~~~~~~~~d~ 111 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA------QNVKLLNIDADTLTDVFEPGEVKR 111 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC------SSEEEECCCGGGHHHHCCTTSCCE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCcCCcCE
Confidence 5678999999999999999987654 799999999999999998866443 46899999988764 56689999
Q ss_pred EecchhhhcCChh------hHHHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~~~~l~~~~~~------d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|++++...+.... ....+++++.++|||||.|++..
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 9887653322210 13579999999999999999874
No 104
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.64 E-value=4.6e-16 Score=140.72 Aligned_cols=108 Identities=21% Similarity=0.216 Sum_probs=92.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++.+..+|+|+|+| .|++.|++++..+++ ..+++++++|+.+++++ ++||+|
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~~D~I 133 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNL-----DHIVEVIEGSVEDISLP-EKVDVI 133 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTC-----TTTEEEEESCGGGCCCS-SCEEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCC-----CCeEEEEECchhhcCcC-CcceEE
Confidence 45678999999999999999998877689999999 999999999877655 45689999999998876 799999
Q ss_pred ecchhhhcCCh-hhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~-~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
++.++.+++.. ..+..++.++.++|||||++++.+
T Consensus 134 v~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 134 ISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 99776665542 357789999999999999998764
No 105
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.64 E-value=9.9e-16 Score=124.46 Aligned_cols=109 Identities=17% Similarity=0.130 Sum_probs=90.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCc-ceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||+|||+|.++..++.. ..+++++|+|+.+++.+++++...++ .. ++++.+.|+.+.. ++++||+
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~d~~~~~-~~~~~D~ 122 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNL-----DNYDIRVVHSDLYENV-KDRKYNK 122 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTC-----TTSCEEEEECSTTTTC-TTSCEEE
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECchhccc-ccCCceE
Confidence 346789999999999999988877 55799999999999999999865443 11 3899999988743 3578999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|+++.++++. .++...+++++.++|+|||++++....
T Consensus 123 v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 123 IITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp EEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred EEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 9999887763 346779999999999999999998654
No 106
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.64 E-value=1e-15 Score=137.29 Aligned_cols=109 Identities=22% Similarity=0.281 Sum_probs=93.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||||||+|..+..+++.++. +++++|+ +.+++.|++++...++ ..+++++.+|+.+ +.+ ..||+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~ 252 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL-----SDRVDVVEGDFFE-PLP-RKADA 252 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCS-SCEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCC-CCC-CCccE
Confidence 346789999999999999999988754 7999999 9999999998866443 3479999999876 333 35999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|++..++||+++++...++++++++|||||++++.|.+
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99999999999877789999999999999999999986
No 107
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.63 E-value=5.4e-16 Score=138.91 Aligned_cols=107 Identities=17% Similarity=0.158 Sum_probs=90.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||||||+|.++..+++.+..+|+|+|+| .|++.|+++....++ ..+++++++|+.++++++++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKL-----DHVVTIIKGKVEEVELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCC-----CCcEEEEECcHHHccCCCCceEEEE
Confidence 3568999999999999999988866689999999 599999999877655 3569999999999988778999999
Q ss_pred cchhhhcC-ChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 236 VQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 236 ~~~~l~~~-~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+.++.+++ ...++..++.++.++|||||++++.
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 98764444 2236779999999999999998743
No 108
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.63 E-value=1.8e-15 Score=125.98 Aligned_cols=101 Identities=13% Similarity=0.012 Sum_probs=77.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC----CCCCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPETG 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~ 229 (277)
..++.+|||+|||+|..+..+++... .+|+|+|+|+.|++.+.+.... ..++.++.+|+... ++. +
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~-~ 125 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE--------RNNIIPLLFDASKPWKYSGIV-E 125 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH--------CSSEEEECSCTTCGGGTTTTC-C
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc--------CCCeEEEEcCCCCchhhcccc-c
Confidence 45778999999999999998887653 3799999999988766655433 23577888888763 334 7
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+||+|+++.. + ..+...++++++++|||||+|+++
T Consensus 126 ~fD~V~~~~~-~---~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 126 KVDLIYQDIA-Q---KNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CEEEEEECCC-S---TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEEecc-C---hhHHHHHHHHHHHHhCCCCEEEEE
Confidence 9999998732 1 124456799999999999999997
No 109
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.63 E-value=5.7e-16 Score=140.16 Aligned_cols=106 Identities=24% Similarity=0.236 Sum_probs=92.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..++..+. +|+++|+|+.+++.|++++..+++ .+++++.|+.+...++++||+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~-------~v~~~~~D~~~~~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL-------KAQALHSDVDEALTEEARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC-------CCEEEECSTTTTSCTTCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC-------CeEEEEcchhhccccCCCeEEEEE
Confidence 567999999999999999988755 799999999999999999876543 378999999988766689999999
Q ss_pred chhhhc---CChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 237 QWCIGH---LTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 237 ~~~l~~---~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+.++|+ ...++...+++++.++|||||+++++.+
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 999988 3345778999999999999999999865
No 110
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.63 E-value=1.1e-15 Score=136.73 Aligned_cols=109 Identities=14% Similarity=0.120 Sum_probs=87.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||||||+|..+..+++.++. +++++|+ +.++. +++....+. ..++++..+|+.+ +.+ +||+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~-----~~~v~~~~~d~~~-~~p--~~D~ 250 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDV-----AGRWKVVEGDFLR-EVP--HADV 250 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGG-----TTSEEEEECCTTT-CCC--CCSE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCC-----CCCeEEEecCCCC-CCC--CCcE
Confidence 456789999999999999999988766 7899999 45544 333322222 3579999999962 333 8999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (277)
|++..++||+++++...++++++++|||||++++.|.+.++
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 99999999999887789999999999999999999986543
No 111
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.63 E-value=6.9e-16 Score=127.44 Aligned_cols=102 Identities=16% Similarity=0.122 Sum_probs=86.4
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|++++...+. .++++.+.|+.+.. +++||+|++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~--~~~fD~i~~ 131 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI------YDIALQKTSLLADV--DGKFDLIVA 131 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CCCEEEESSTTTTC--CSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEeccccccC--CCCceEEEE
Confidence 6789999999999999988876555899999999999999999876543 23889999997754 479999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+.++++ +..+++++.++|+|||++++.+..
T Consensus 132 ~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 132 NILAEI-----LLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp ESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred CCcHHH-----HHHHHHHHHHhcCCCCEEEEEecC
Confidence 988765 458999999999999999997643
No 112
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.63 E-value=9.3e-17 Score=130.17 Aligned_cols=120 Identities=10% Similarity=0.038 Sum_probs=91.7
Q ss_pred cccchHHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCc
Q 023787 134 DIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHK 212 (277)
Q Consensus 134 ~~~~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~ 212 (277)
.++....++...... ..++.+|||+|||+|.++..++...+. +|+++|+|+.|++.+++++...|. ..
T Consensus 32 RLp~ld~fY~~~~~~------l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~-----~~ 100 (200)
T 3fzg_A 32 RVATLNDFYTYVFGN------IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT-----TI 100 (200)
T ss_dssp TGGGHHHHHHHHHHH------SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC-----SS
T ss_pred HhHhHHHHHHHHHhh------cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC-----Cc
Confidence 345555565554432 235789999999999999988765333 899999999999999999877554 22
Q ss_pred ceeEEEcCCCCCCCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 213 ATNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 213 ~~~~~~~d~~~~~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
++++ .|.... .++++||+|++..++|+++ +....+.++.+.|+|||+++-.+
T Consensus 101 ~v~~--~d~~~~-~~~~~~DvVLa~k~LHlL~--~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 101 KYRF--LNKESD-VYKGTYDVVFLLKMLPVLK--QQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEE--ECCHHH-HTTSEEEEEEEETCHHHHH--HTTCCHHHHHHTCEEEEEEEEEE
T ss_pred cEEE--eccccc-CCCCCcChhhHhhHHHhhh--hhHHHHHHHHHHhCCCCEEEEeC
Confidence 4555 555443 3457899999999999994 55577779999999999998877
No 113
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.63 E-value=7.9e-16 Score=137.75 Aligned_cols=106 Identities=16% Similarity=0.131 Sum_probs=91.4
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||||||+|.++..+++.+..+|+++|+|+ |++.|++++..+++ ..+++++.+|+.+++.+ ++||+|+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l-----~~~v~~~~~d~~~~~~~-~~~D~Iv 121 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEEVSLP-EQVDIII 121 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCC-----CCcEEEEEcchhhCCCC-CceeEEE
Confidence 46789999999999999988877666899999996 99999998876554 35799999999988765 6899999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+..+++|+..++....+.++.++|||||++++.
T Consensus 122 s~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 122 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 999988887677778899999999999999854
No 114
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.62 E-value=7.2e-18 Score=142.87 Aligned_cols=102 Identities=16% Similarity=0.130 Sum_probs=83.9
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|..+..++..+ .+|+++|+|+.|++.|++++...++ ..+++++++|+.+++ ++++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGI-----ADKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCC-----CcCeEEEECChHHhc-ccCCCCEEEE
Confidence 57899999999999999999776 5799999999999999999876543 357999999998776 4479999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
+.++++.... ...+.+++++|+|||.+++
T Consensus 151 ~~~~~~~~~~--~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 151 SPPWGGPDYA--TAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CCCCSSGGGG--GSSSBCTTTSCSSCHHHHH
T ss_pred CCCcCCcchh--hhHHHHHHhhcCCcceeHH
Confidence 9999887633 3466677788888887554
No 115
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.62 E-value=7.6e-16 Score=128.62 Aligned_cols=94 Identities=20% Similarity=0.235 Sum_probs=83.5
Q ss_pred CccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecc
Q 023787 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~ 237 (277)
+.+|||+|||+|.++..++.. +++|+|+.|++.++++ ++.+.+.|+.++++++++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-------------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-------------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-------------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-------------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 679999999999999877533 9999999999999886 2678899998888777899999999
Q ss_pred hhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
.+++|++ +...+++++.++|+|||++++.+..
T Consensus 110 ~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 110 TTICFVD--DPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp SCGGGSS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chHhhcc--CHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 9999998 6679999999999999999998654
No 116
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.62 E-value=7.9e-17 Score=147.42 Aligned_cols=105 Identities=19% Similarity=0.217 Sum_probs=83.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++... .....+...+...+++++++||+|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~~~~~~l~~~~~~fD~I 175 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIR--------VRTDFFEKATADDVRRTEGPANVI 175 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCC--------EECSCCSHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCC--------cceeeechhhHhhcccCCCCEEEE
Confidence 45678999999999999999987766 699999999999999876211 011112223333444455799999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++..+++|++ ++..++++++++|||||++++...
T Consensus 176 ~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 176 YAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9999999998 778999999999999999999754
No 117
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.62 E-value=4.2e-15 Score=125.23 Aligned_cols=109 Identities=8% Similarity=-0.016 Sum_probs=87.4
Q ss_pred cCCCcCCCCCccEEEeeccccHHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC--
Q 023787 149 RFPNARNNQHLVALDCGSGIGRITKNLLIR-YFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-- 224 (277)
Q Consensus 149 ~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~-~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 224 (277)
.+......++.+|||+|||+|.++..+++. ++. +|+++|+|+.|++.++++... ..++..+..|..+.
T Consensus 69 gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~--------~~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 69 GLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD--------RRNIFPILGDARFPEK 140 (233)
T ss_dssp TCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT--------CTTEEEEESCTTCGGG
T ss_pred chhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh--------hcCeeEEEEeccCccc
Confidence 333345789999999999999999999876 343 899999999999999999876 35688888877653
Q ss_pred -CCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 225 -TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 225 -~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+...+++|+|++... +.. +...++.++++.|||||.++++.
T Consensus 141 ~~~~~~~vDvVf~d~~--~~~--~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 141 YRHLVEGVDGLYADVA--QPE--QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp GTTTCCCEEEEEECCC--CTT--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccceEEEEEEecc--CCh--hHHHHHHHHHHhccCCCEEEEEE
Confidence 345679999986543 323 56689999999999999999874
No 118
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.61 E-value=6.6e-16 Score=132.50 Aligned_cols=110 Identities=19% Similarity=0.061 Sum_probs=89.1
Q ss_pred CC-CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CCCCce
Q 023787 155 NN-QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRY 231 (277)
Q Consensus 155 ~~-~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~f 231 (277)
.. ++.+|||+|||+|.++..++..+..+|+++|+++.+++.|++++...++ ..+++++++|+.++. +++++|
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~-----~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQL-----EDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGGGGTSCTTCE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCC-----cccEEEEECcHHHhhhhhccCCc
Confidence 44 6789999999999999988877665899999999999999999877655 356899999998875 446899
Q ss_pred eEEecchhhhcC------------------ChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQWCIGHL------------------TDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~~~l~~~------------------~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|+++..+... ...++..+++.+.++|||||++++.-
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 999997654332 11346789999999999999999964
No 119
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=1.9e-15 Score=136.53 Aligned_cols=113 Identities=19% Similarity=0.165 Sum_probs=89.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||+|||+|.++..++..++ .+|+++|+|+.|++.|++++..+++.. ..+++|+..|+.+ .+++++||+
T Consensus 220 ~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~---~~~v~~~~~D~~~-~~~~~~fD~ 295 (375)
T 4dcm_A 220 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA---LDRCEFMINNALS-GVEPFRFNA 295 (375)
T ss_dssp CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGG---GGGEEEEECSTTT-TCCTTCEEE
T ss_pred ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCc---CceEEEEechhhc-cCCCCCeeE
Confidence 34558999999999999999998864 489999999999999999987654310 1357889999987 345579999
Q ss_pred EecchhhhcC---ChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 234 IWVQWCIGHL---TDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 234 Vi~~~~l~~~---~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|+++..+|+. +......+++++.++|||||+++++.|.
T Consensus 296 Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 296 VLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp EEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred EEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 9999998863 3334557899999999999999998653
No 120
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.61 E-value=1.7e-15 Score=127.20 Aligned_cols=106 Identities=21% Similarity=0.153 Sum_probs=84.5
Q ss_pred CCCccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeE
Q 023787 156 NQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~ 233 (277)
.++.+|||+||| +|.++..++.....+|+++|+|+.+++.|++++...+. +++++++|+..+ ++++++||+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS-------NVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC-------CCEEEECSSCSSTTTCCSCEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC-------CcEEEeCCchhhhhcccCceeE
Confidence 467899999999 99999998877445799999999999999999876432 688999997544 244579999
Q ss_pred EecchhhhcCChh-----------------hHHHHHHHHHhcCCCCcEEEEE
Q 023787 234 IWVQWCIGHLTDD-----------------DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 234 Vi~~~~l~~~~~~-----------------d~~~~l~~~~r~LkpGG~lii~ 268 (277)
|+++..+++.++. ....+++++.++|||||++++.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 9999776654421 1478999999999999999985
No 121
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.61 E-value=1.1e-15 Score=136.52 Aligned_cols=106 Identities=20% Similarity=0.231 Sum_probs=89.0
Q ss_pred CCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
++.+|||+|||+|.++..+++.++. +|+++|+|+.|++.+++++...+. ...+...|+.+.. +++||+|+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-------~~~~~~~d~~~~~--~~~fD~Iv 266 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-------EGEVFASNVFSEV--KGRFDMII 266 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-------CCEEEECSTTTTC--CSCEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-------CCEEEEccccccc--cCCeeEEE
Confidence 4579999999999999999988764 899999999999999999866432 3567888887654 57899999
Q ss_pred cchhhhcC---ChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 236 VQWCIGHL---TDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 236 ~~~~l~~~---~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++.++|+. ...+...+++++.++|||||.+++..+.
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 99998863 3346789999999999999999998764
No 122
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=3.8e-15 Score=127.96 Aligned_cols=110 Identities=17% Similarity=0.191 Sum_probs=88.4
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCC---CCCCCCCCCcceeEEEcCCCCC------
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAP---ENHMAPDMHKATNFFCVPLQDF------ 224 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~---~~~~~~~~~~~~~~~~~d~~~~------ 224 (277)
..++.+|||+|||+|.++..++.+.+. +|+++|+++.+++.|++++.. .++ ..++++++.|+.++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l-----~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF-----SARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT-----GGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC-----cceEEEEeCCHHHHhhhhhh
Confidence 346679999999999999999888754 899999999999999999887 654 34699999999987
Q ss_pred -CCCCCceeEEecchhhhc----------------CChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 225 -TPETGRYDVIWVQWCIGH----------------LTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 225 -~~~~~~fD~Vi~~~~l~~----------------~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.+++++||+|+++..+.. .....+..+++.+.++|||||++++.-
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 245679999999844332 122347789999999999999999863
No 123
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.61 E-value=9.2e-16 Score=123.66 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=85.8
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEEe
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~Vi 235 (277)
++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++...++ ..+++++++|+.+. +..+++||+|+
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-----ENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-----GGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECcHHHhHHhhcCCCCEEE
Confidence 5679999999999999998877556899999999999999999877554 34789999998763 32235799999
Q ss_pred cchhhhcCChhhHHHHHHHHH--hcCCCCcEEEEEecC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAK--VGLKPGGFFVLKENI 271 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~--r~LkpGG~lii~e~~ 271 (277)
++..++. .....+++.+. ++|+|||++++....
T Consensus 106 ~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 106 LDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp ECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred ECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 9877542 24456777776 999999999997554
No 124
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.61 E-value=6.5e-16 Score=131.04 Aligned_cols=102 Identities=17% Similarity=0.192 Sum_probs=84.6
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC---CCce
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRY 231 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~f 231 (277)
.++.+|||+|||+|..+..++.... .+|+++|+|+.|++.|+++....++ .+++++++|+.++++. +++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL------ENTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEESCHHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEeccHHHhcccccccCCc
Confidence 3567999999999999998886443 3799999999999999998765443 3589999998877643 5799
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|++..+ . ++..+++.+.++|||||++++..
T Consensus 143 D~V~~~~~----~--~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 143 DIVTARAV----A--RLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEEEECC----S--CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cEEEEecc----C--CHHHHHHHHHHhcCCCCEEEEEe
Confidence 99998763 3 56799999999999999999875
No 125
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.60 E-value=9.9e-16 Score=126.68 Aligned_cols=105 Identities=14% Similarity=0.120 Sum_probs=85.3
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEEe
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~Vi 235 (277)
++.+|||+|||+|.++..++.++..+|+++|+|+.|++.|++++...++ .+++++++|+.++ +..+++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~D~~~~~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA------GNARVVNSNAMSFLAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCHHHHHSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEECCHHHHHhhcCCCCCEEE
Confidence 4579999999999999988888776899999999999999999876443 4689999998763 44457899999
Q ss_pred cchhhhcCChhhHHHHHHHHHh--cCCCCcEEEEEec
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKEN 270 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r--~LkpGG~lii~e~ 270 (277)
+...++ .. ....+++.+.+ +|+|||++++..+
T Consensus 128 ~~~p~~-~~--~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 128 VDPPFR-RG--LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp ECCSSS-TT--THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ECCCCC-CC--cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 987754 23 55678888865 5999999998754
No 126
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.60 E-value=4.9e-15 Score=124.46 Aligned_cols=100 Identities=20% Similarity=0.133 Sum_probs=84.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|..+..++..+ .+|+++|+|+.+++.+++++... .++++.++|+.+....+++||+|
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~--------~~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYY--------NNIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTC--------SSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhc--------CCeEEEECCcccccccCCCccEE
Confidence 4567899999999999999998877 57999999999999999998763 26889999987743345789999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++..+++|+++ ++.++|||||++++..+.
T Consensus 139 ~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 139 VVWATAPTLLC--------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EESSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred EECCcHHHHHH--------HHHHHcCCCcEEEEEEcC
Confidence 99999999872 588899999999998654
No 127
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.60 E-value=5.2e-15 Score=124.63 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=83.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC----CCCCCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD----FTPETG 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~ 229 (277)
..++.+|||+|||+|..+..++.... .+|+++|+|+.|++.++++... ..++.++.+|+.+ .++. +
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE--------RENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT--------CTTEEEEECCTTCGGGGTTTS-C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc--------CCCeEEEECCCCCcccccccC-c
Confidence 45678999999999999999988753 4899999999999999998765 3568899999988 6665 7
Q ss_pred ceeEEecchhhhcCChh-hHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTDD-DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~-d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+||+|+ +++++. ....+++++.++|||||++++.
T Consensus 143 ~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 143 KVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 899999 444422 3367899999999999999996
No 128
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.60 E-value=2.8e-15 Score=135.15 Aligned_cols=104 Identities=17% Similarity=0.331 Sum_probs=89.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..+..+|||||||+|..+..+++.++. +++++|+ +.+++.+++ ..+++|+.+|+.+ +.+++ |+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~p~~--D~ 264 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------------FSGVEHLGGDMFD-GVPKG--DA 264 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCCC--SE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------------cCCCEEEecCCCC-CCCCC--CE
Confidence 346689999999999999999988766 7999999 888876653 2468999999987 55543 99
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (277)
|++..++|++++++...+|++++++|||||++++.|.+.++
T Consensus 265 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp EEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999999999888889999999999999999999987543
No 129
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.60 E-value=3.2e-15 Score=134.55 Aligned_cols=104 Identities=17% Similarity=0.260 Sum_probs=89.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..+..+|||||||+|..+..+++.++. +++++|+ +.+++.|++ ..+++|..+|+.+ +.+.+ |+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~D~~~-~~p~~--D~ 262 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------------FPGVTHVGGDMFK-EVPSG--DT 262 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCCC--SE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------------cCCeEEEeCCcCC-CCCCC--CE
Confidence 346689999999999999999988766 8999999 888876653 2469999999987 65543 99
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (277)
|++.+++|++++++...+|++++++|||||+++|.|.+.++
T Consensus 263 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 263 ILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred EEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999999999888999999999999999999999987543
No 130
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.59 E-value=1.8e-15 Score=128.22 Aligned_cols=113 Identities=12% Similarity=0.082 Sum_probs=81.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC-CC--CCCCce
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT--PETGRY 231 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~--~~~~~f 231 (277)
.++.+|||||||+|.++..++...+. .|+|+|+|+.|++.|++++............++.++++|+.+ ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 45679999999999999998877654 799999999999999877532000000002579999999987 44 667899
Q ss_pred eEEecchhhhcCChh------hHHHHHHHHHhcCCCCcEEEEE
Q 023787 232 DVIWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~------d~~~~l~~~~r~LkpGG~lii~ 268 (277)
|.|++.+...+.... ....+++++.++|||||.|++.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 999876543222100 0147999999999999999986
No 131
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.59 E-value=1.2e-14 Score=130.20 Aligned_cols=110 Identities=15% Similarity=0.212 Sum_probs=94.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
.....+|+|||||+|.++..++++++. ++++.|. |.+++.|+++....+ ..++++..+|+.+.+.+ .+|+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~------~~rv~~~~gD~~~~~~~--~~D~ 247 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE------EEQIDFQEGDFFKDPLP--EADL 247 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--------CCSEEEEESCTTTSCCC--CCSE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc------cCceeeecCccccCCCC--CceE
Confidence 445679999999999999999999887 7888887 889999999876532 36799999999875544 5899
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
|++.+++|+.++++...+|+++++.|+|||+++|.|.+.+
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 9999999999998889999999999999999999998754
No 132
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.59 E-value=1.9e-15 Score=128.92 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=87.2
Q ss_pred CCCccEEEeeccccHHHHHHHHh--CC-CcEEEEeCCHHHHHHHHHHhCCC---CCCCCCCCcc----------------
Q 023787 156 NQHLVALDCGSGIGRITKNLLIR--YF-NEVDLLEPVSHFLDAARESLAPE---NHMAPDMHKA---------------- 213 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~--~~-~~v~gvD~S~~~l~~a~~~~~~~---~~~~~~~~~~---------------- 213 (277)
.++.+|||+|||+|.++..++.. .. .+|+|+|+|+.|++.|++++... ++ ..+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 124 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL-----TARELERREQSERFGKPSY 124 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH-----HHHHHHHHHHHHHHCCHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc-----cccchhhhhhhhhcccccc
Confidence 35689999999999999988876 32 37999999999999999887653 21 011
Q ss_pred ---------ee-------------EEEcCCCCCCC-----CCCceeEEecchhhhcCCh-------hhHHHHHHHHHhcC
Q 023787 214 ---------TN-------------FFCVPLQDFTP-----ETGRYDVIWVQWCIGHLTD-------DDFVSFFKRAKVGL 259 (277)
Q Consensus 214 ---------~~-------------~~~~d~~~~~~-----~~~~fD~Vi~~~~l~~~~~-------~d~~~~l~~~~r~L 259 (277)
++ +.+.|+.+... ...+||+|+++..+++... +....+++++.++|
T Consensus 125 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~L 204 (250)
T 1o9g_A 125 LEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASAL 204 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHS
T ss_pred hhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhc
Confidence 55 89999887432 3348999999987776542 45678999999999
Q ss_pred CCCcEEEEEecC
Q 023787 260 KPGGFFVLKENI 271 (277)
Q Consensus 260 kpGG~lii~e~~ 271 (277)
+|||+++++.+.
T Consensus 205 kpgG~l~~~~~~ 216 (250)
T 1o9g_A 205 PAHAVIAVTDRS 216 (250)
T ss_dssp CTTCEEEEEESS
T ss_pred CCCcEEEEeCcc
Confidence 999999997654
No 133
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.59 E-value=1.5e-15 Score=123.08 Aligned_cols=108 Identities=16% Similarity=0.117 Sum_probs=85.1
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (277)
.++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++...++ ..+++++++|+.+.. .++++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE-----PEKFEVRKMDANRALEQFYEEKLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC-----CcceEEEECcHHHHHHHHHhcCCCC
Confidence 35679999999999999988876656899999999999999999866443 346899999987642 124789
Q ss_pred eEEecchhhhcCChhhHHHHHHHH--HhcCCCCcEEEEEecC
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRA--KVGLKPGGFFVLKENI 271 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~--~r~LkpGG~lii~e~~ 271 (277)
|+|+++.+++.. ....+++.+ .++|+|||++++....
T Consensus 118 D~i~~~~~~~~~---~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 118 DLVLLDPPYAKQ---EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEEECCCGGGC---CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CEEEECCCCCch---hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 999998886532 334566666 8999999999987543
No 134
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.59 E-value=8.4e-16 Score=127.77 Aligned_cols=88 Identities=24% Similarity=0.298 Sum_probs=75.4
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|.++..+. .+|+++|+|+. ++.+.++|+.++++++++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------------STTEEESCTTSCSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------------CceEEEeccccCCCCCCCEeEEE
Confidence 356899999999999988662 46999999976 25678899998888778999999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+..++|+ + +...+++++.++|+|||++++.+..
T Consensus 121 ~~~~l~~-~--~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 121 FCLSLMG-T--NIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp EESCCCS-S--CHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred Eehhccc-c--CHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 9999975 4 6779999999999999999998764
No 135
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.59 E-value=3.2e-15 Score=132.71 Aligned_cols=105 Identities=16% Similarity=0.189 Sum_probs=88.0
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..+++.+..+|+++|+| .|++.|++++..+++ ..+++++.+|+.++++++++||+|++
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGF-----SDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTC-----TTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCC-----CCCEEEEECchhhccCCCCcccEEEE
Confidence 567999999999999998887766689999999 699999999876554 35689999999998877689999999
Q ss_pred chhhhcCC-hhhHHHHHHHHHhcCCCCcEEEE
Q 023787 237 QWCIGHLT-DDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 237 ~~~l~~~~-~~d~~~~l~~~~r~LkpGG~lii 267 (277)
.++.+++. ...+..++.++.++|||||++++
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 86544432 23577899999999999999974
No 136
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.58 E-value=3.1e-15 Score=135.01 Aligned_cols=102 Identities=15% Similarity=0.203 Sum_probs=87.3
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.+..+|||||||+|..+..+++.++. +++++|+ +.|++.|++ ..+++++.+|+.+ +.+. ||+|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~~~--~D~v 271 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------------LSGIEHVGGDMFA-SVPQ--GDAM 271 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCC--EEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------------cCCCEEEeCCccc-CCCC--CCEE
Confidence 45689999999999999999988765 7888899 999987653 1358999999987 5543 9999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
++..++||+++++...++++++++|||||++++.|.+.+
T Consensus 272 ~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 272 ILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 999999999977777999999999999999999987643
No 137
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.58 E-value=1.4e-15 Score=126.70 Aligned_cols=106 Identities=14% Similarity=0.139 Sum_probs=81.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhC----CCCCCCCCCCcceeEEEcCCCCCCCCCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLA----PENHMAPDMHKATNFFCVPLQDFTPETG 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 229 (277)
..++.+|||+|||+|.++..++..++. +|+|+|+|+.|++.+.++.. ..+ ..++.+.++|+.+++++++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~------~~~v~~~~~d~~~l~~~~~ 98 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG------LPNLLYLWATAERLPPLSG 98 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC------CTTEEEEECCSTTCCSCCC
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC------CCceEEEecchhhCCCCCC
Confidence 346789999999999999999988643 89999999999996443332 222 2478999999999887765
Q ss_pred ceeEEe---cchhhh--cCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 230 RYDVIW---VQWCIG--HLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 230 ~fD~Vi---~~~~l~--~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+ |.|+ +...++ |++ +...+++++.++|||||++++..
T Consensus 99 ~-d~v~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp E-EEEEEESCCHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEE
T ss_pred C-CEEEEEccchhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEe
Confidence 5 6655 333443 666 34589999999999999999964
No 138
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.58 E-value=2.5e-15 Score=130.39 Aligned_cols=104 Identities=14% Similarity=0.161 Sum_probs=88.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++..+++ ..+++++++|+.++.. +++||+|++
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~-----~~~v~~~~~D~~~~~~-~~~fD~Vi~ 198 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFPG-ENIADRILM 198 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCCC-CSCEEEEEE
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECCHHHhcc-cCCccEEEE
Confidence 5789999999999999999988776799999999999999999877655 3458899999999876 579999998
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
.... ....++.++.++|||||++++.++..
T Consensus 199 ~~p~------~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 199 GYVV------RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CCCS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCch------hHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 6542 22478999999999999999987653
No 139
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.58 E-value=3.6e-15 Score=138.69 Aligned_cols=105 Identities=16% Similarity=0.132 Sum_probs=90.1
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||||||+|.++..+++.+..+|+++|+|+ |++.|++++...++ ..+++++.+|+.+++++ ++||+|+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl-----~~~v~~~~~d~~~~~~~-~~fD~Iv 229 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEEVSLP-EQVDIII 229 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCC-----CCcEEEEECchhhCccC-CCeEEEE
Confidence 45689999999999999988876555899999998 99999998876654 45799999999987655 5899999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
+..+++|+..++....+.++.++|||||++++
T Consensus 230 s~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 230 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 99888887766777888899999999999985
No 140
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.57 E-value=2.2e-15 Score=126.10 Aligned_cols=107 Identities=10% Similarity=0.090 Sum_probs=84.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-C-CC----C
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-PE----T 228 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~~----~ 228 (277)
++.+|||||||+|..+..+++... .+|+++|+|+.|++.|++++...++ ..+++++++|+.+. + .. .
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~l~~~~~~~~~ 132 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL-----QDKVTILNGASQDLIPQLKKKYDV 132 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHGGGTTTTSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC-----CCceEEEECCHHHHHHHHHHhcCC
Confidence 567999999999999998886532 3899999999999999999876554 35699999987543 2 11 2
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++||+|++....++.. +...++..+ ++|||||++++.+..
T Consensus 133 ~~fD~V~~d~~~~~~~--~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYL--PDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCCSEEEECSCGGGHH--HHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred CceEEEEEcCCcccch--HHHHHHHhc-cccCCCeEEEEeCCC
Confidence 6899999988776654 444678878 999999999886543
No 141
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.57 E-value=5.3e-15 Score=130.67 Aligned_cols=102 Identities=21% Similarity=0.202 Sum_probs=86.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~--~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||||||+|.++..+++.+.. +|+++|+|+.+++.|++++...++ .++++...|+.+...++++||
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~------~~v~~~~~d~~~~~~~~~~fD 146 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------ENVIFVCGDGYYGVPEFSPYD 146 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCeEEEECChhhccccCCCeE
Confidence 457789999999999999998877542 599999999999999999876543 358999999987655557899
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+|++..+++|++ +++.+.|||||++++...
T Consensus 147 ~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 147 VIFVTVGVDEVP--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEEECSBBSCCC--------HHHHHHEEEEEEEEEEBC
T ss_pred EEEEcCCHHHHH--------HHHHHhcCCCcEEEEEEC
Confidence 999999999987 357889999999999854
No 142
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.57 E-value=1.1e-14 Score=133.09 Aligned_cols=114 Identities=13% Similarity=-0.008 Sum_probs=87.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHH-------HHHhCCCCCCCCCCCcceeEEEcCCCCC--
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAA-------RESLAPENHMAPDMHKATNFFCVPLQDF-- 224 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a-------~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 224 (277)
..++.+|||||||+|..+..++.... .+|+|+|+|+.+++.| ++++...++. ..+++++++|....
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~----~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR----LNNVEFSLKKSFVDNN 315 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC----CCCEEEEESSCSTTCH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC----CCceEEEEcCcccccc
Confidence 45778999999999999999987643 4799999999999988 7777654320 14688888754321
Q ss_pred CC--CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 023787 225 TP--ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSD 275 (277)
Q Consensus 225 ~~--~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~~~ 275 (277)
++ ..++||+|+++.++ +. +++..+|+++.+.|||||++++.+...+..
T Consensus 316 ~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp HHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred ccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 11 23689999987766 32 377789999999999999999998776554
No 143
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=8e-15 Score=121.82 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=84.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||+|||+|..+..++..+. .+|+++|+|+.+++.+++++...+. .++.+...|+......+++||
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD 148 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY------DNVIVIVGDGTLGYEPLAPYD 148 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEECCcccCCCCCCCee
Confidence 45678999999999999999988763 4799999999999999998765332 358888888754333357899
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+|++..+++|++ +++.++|||||++++...
T Consensus 149 ~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 149 RIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EEEESSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHHH--------HHHHHHcCCCcEEEEEEC
Confidence 999999999987 278899999999999854
No 144
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.57 E-value=2.6e-15 Score=126.74 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=84.1
Q ss_pred CCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC--CCCceeE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD~ 233 (277)
++.+|||||||+|..+..++... ..+|+++|+|+.+++.|++++...++ ..+++++++|+.+... .+++||+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~ 145 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF-----ENQVRIIEGNALEQFENVNDKVYDM 145 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCHHHHTTSCEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECCHHHHHHhhccCCccE
Confidence 56799999999999999988743 23899999999999999999876554 3579999999877532 2579999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|++.... .....+++++.++|||||+|++.+
T Consensus 146 V~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 146 IFIDAAK-----AQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEEETTS-----SSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEcCcH-----HHHHHHHHHHHHhcCCCeEEEEee
Confidence 9976542 256689999999999999998743
No 145
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.57 E-value=7.7e-15 Score=121.09 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=84.0
Q ss_pred CCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
++.+|||+|||+|..+..++...+ .+++++|+|+.+++.+++++...++ .++.+.+.|+.+.+ +.++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~-~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL------ENIEPVQSRVEEFP-SEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------SSEEEEECCTTTSC-CCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEecchhhCC-ccCCcCEEE
Confidence 367999999999999999987753 3899999999999999998866443 34899999998876 346899999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+... . ++..+++++.++|+|||++++...
T Consensus 138 ~~~~----~--~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 138 SRAF----A--SLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSCS----S--SHHHHHHHHTTSEEEEEEEEEEES
T ss_pred Eecc----C--CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 8643 2 566899999999999999999743
No 146
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.57 E-value=3.6e-15 Score=125.18 Aligned_cols=104 Identities=16% Similarity=0.181 Sum_probs=84.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCC-cceeEEEcCCCCCC--CCCCce
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCVPLQDFT--PETGRY 231 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~--~~~~~f 231 (277)
++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ . .+++++++|+.++. .++++|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~~i~~~~gda~~~l~~~~~~~f 130 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY-----SPSRVRFLLSRPLDVMSRLANDSY 130 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHGGGSCTTCE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcCcEEEEEcCHHHHHHHhcCCCc
Confidence 345999999999999999987653 3899999999999999999887655 3 57999999876652 335799
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|+|++.... .+...+++++.++|||||++++.+.
T Consensus 131 D~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 131 QLVFGQVSP-----MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp EEEEECCCT-----TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred CeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 999987542 2566799999999999999998543
No 147
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.57 E-value=5.6e-15 Score=132.27 Aligned_cols=102 Identities=13% Similarity=0.238 Sum_probs=87.1
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.+..+|||||||+|..+..+++.++. +++++|+ +.|++.|++. .++++..+|+.+ +.+ .||+|
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~p--~~D~v 250 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------------NNLTYVGGDMFT-SIP--NADAV 250 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------------TTEEEEECCTTT-CCC--CCSEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------------CCcEEEeccccC-CCC--CccEE
Confidence 35679999999999999999988654 7999999 9999877541 348999999976 444 39999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCC---CcEEEEEecCCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKP---GGFFVLKENIAR 273 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~Lkp---GG~lii~e~~~~ 273 (277)
++.+++||+++++...++++++++||| ||++++.|.+.+
T Consensus 251 ~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 251 LLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred EeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 999999999977777999999999999 999999987643
No 148
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.57 E-value=6.1e-15 Score=125.98 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=85.7
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC---CCce
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRY 231 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~f 231 (277)
.++.+|||||||+|..+..++...+. +|+++|+|+.+++.|+++....++ .+++++++|+++++.. +++|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l------~~v~~~~~d~~~~~~~~~~~~~f 152 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL------KGARALWGRAEVLAREAGHREAY 152 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEECCHHHHTTSTTTTTCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC------CceEEEECcHHHhhcccccCCCc
Confidence 46789999999999999988877543 899999999999999999876554 3589999998877642 3799
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|+|++..+ . ++..+++.+.++|||||++++...
T Consensus 153 D~I~s~a~----~--~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 153 ARAVARAV----A--PLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEEEEESS----C--CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred eEEEECCc----C--CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 99999754 2 566899999999999999988653
No 149
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.56 E-value=3.6e-15 Score=120.92 Aligned_cols=105 Identities=19% Similarity=0.211 Sum_probs=85.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|..+..++..+ .+|+++|+|+.+++.+++++...+. ..++.+.+.|+.+.....++||+|
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v 104 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGL-----GDNVTLMEGDAPEALCKIPDIDIA 104 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTC-----CTTEEEEESCHHHHHTTSCCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCC-----CcceEEEecCHHHhcccCCCCCEE
Confidence 4567899999999999999888776 6799999999999999998765433 246888888876621112589999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++..++++ +..+++++.++|+|||++++...
T Consensus 105 ~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 105 VVGGSGGE-----LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp EESCCTTC-----HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EECCchHH-----HHHHHHHHHHhcCCCcEEEEEec
Confidence 99887754 45899999999999999999754
No 150
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.56 E-value=3.4e-15 Score=125.61 Aligned_cols=107 Identities=19% Similarity=0.151 Sum_probs=78.5
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCC-HHHHHHH---HHHhCCCCCCCCCCCcceeEEEcCCCCCCCC-CC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPV-SHFLDAA---RESLAPENHMAPDMHKATNFFCVPLQDFTPE-TG 229 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S-~~~l~~a---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~ 229 (277)
.++.+|||||||+|.++..+++..+. +|+|+|+| +.|++.| +++....++ .++.|.++|+.+++.. .+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~------~~v~~~~~d~~~l~~~~~d 96 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL------SNVVFVIAAAESLPFELKN 96 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC------SSEEEECCBTTBCCGGGTT
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC------CCeEEEEcCHHHhhhhccC
Confidence 46789999999999999988865544 79999999 7777776 666554433 4689999999988532 25
Q ss_pred ceeEEecchhhhcC---ChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHL---TDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~---~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.+|.|++++...+. ...+...++++++|+|||||++++.
T Consensus 97 ~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 97 IADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp CEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 67777665432211 0012346899999999999999994
No 151
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.56 E-value=6.2e-15 Score=126.65 Aligned_cols=127 Identities=16% Similarity=0.171 Sum_probs=92.0
Q ss_pred chHHHHHHHHhccCCCcCCCCCccEEEeeccc--cHHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCc
Q 023787 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGI--GRITKNLLIR-YFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHK 212 (277)
Q Consensus 137 ~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGt--G~~s~~l~~~-~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~ 212 (277)
..+.|+...+..+.. .....+|||||||+ +..+..++.. .+. +|+++|.|+.|++.|++++...+ ..
T Consensus 61 ~nr~fl~rav~~l~~---~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~------~~ 131 (277)
T 3giw_A 61 ANRDWMNRAVAHLAK---EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP------EG 131 (277)
T ss_dssp HHHHHHHHHHHHHHH---TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS------SS
T ss_pred HHHHHHHHHHHHhcc---ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC------CC
Confidence 445566655543321 12346899999997 3333445543 332 89999999999999999987532 24
Q ss_pred ceeEEEcCCCCCC----CC--CCcee-----EEecchhhhcCChhh-HHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 213 ATNFFCVPLQDFT----PE--TGRYD-----VIWVQWCIGHLTDDD-FVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 213 ~~~~~~~d~~~~~----~~--~~~fD-----~Vi~~~~l~~~~~~d-~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+++|+++|+.+.. .+ .+.|| .|+++.+|||+++.+ ...+++++.+.|+|||+|++++.+.
T Consensus 132 ~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 132 RTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp EEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 6899999998852 01 23455 588999999999655 6789999999999999999997654
No 152
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.56 E-value=1.2e-15 Score=145.00 Aligned_cols=109 Identities=17% Similarity=0.109 Sum_probs=90.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC--CCCCCceeEE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~V 234 (277)
.+.+|||||||+|.++..|++.+.. |+|||+|+.+|+.|+.+....+. .+++|.+.+++++ ..++++||+|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~-V~giD~~~~~i~~a~~~a~~~~~------~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGAT-IVGIDFQQENINVCRALAEENPD------FAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTSTT------SEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCE-EEEECCCHHHHHHHHHHHHhcCC------CceEEEECCHHHHhhhccCCCccEE
Confidence 5689999999999999999988775 99999999999999998876442 4699999999887 3556899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+|..+++|+++++....+..+.+.|+++|..++...+.
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99999999986654444566777888888777765544
No 153
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.56 E-value=2.4e-14 Score=124.37 Aligned_cols=110 Identities=9% Similarity=0.076 Sum_probs=82.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeC-CHHHHHHHHHHh-----CCCCCCCCCCCcceeEEEcCCCCCC--C-
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP-VSHFLDAARESL-----APENHMAPDMHKATNFFCVPLQDFT--P- 226 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~-S~~~l~~a~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~--~- 226 (277)
.++.+|||+|||+|.++..++..+..+|+++|+ |+.+++.|+++. ...++.. ....++.+...+..+.. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSET-VKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhccccc-CCCCCeEEEEecCCCccHHHH
Confidence 356799999999999999888766658999999 899999999998 3332200 00035777766655431 1
Q ss_pred ---CCCceeEEecchhhhcCChhhHHHHHHHHHhcCC---C--CcEEEEE
Q 023787 227 ---ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLK---P--GGFFVLK 268 (277)
Q Consensus 227 ---~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~Lk---p--GG~lii~ 268 (277)
++++||+|++..+++|.+ +...+++.+.++|+ | ||++++.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~--~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQ--AHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGG--GHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccChH--HHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 347899999999999866 77799999999999 9 9987765
No 154
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=1e-14 Score=124.38 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=84.7
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CC--CCCce
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP--ETGRY 231 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~--~~~~f 231 (277)
++.+|||||||+|..+..++...+ .+|+++|+|+.+++.|++++...++ ..+++++++|+.+. +. ..++|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV-----DQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHTCCSCCCC
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHhcCCCCCe
Confidence 568999999999999999987653 3899999999999999999876554 35799999988653 21 23589
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|+|++... ..+...+++++.++|||||+|++.+..
T Consensus 138 D~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 138 DLIFIDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp SEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred EEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 99998653 335668999999999999999886543
No 155
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.55 E-value=9.1e-15 Score=131.55 Aligned_cols=104 Identities=19% Similarity=0.215 Sum_probs=87.4
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||||||+|.++...++.+..+|++||.|+ |++.|++.+..+++ ..++.++.++++++.++ .+||+|++
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~-----~~~i~~i~~~~~~~~lp-e~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGL-----EDRVHVLPGPVETVELP-EQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCC-----CceEEEEeeeeeeecCC-ccccEEEe
Confidence 5679999999999999988877888999999995 89999999888776 56799999999998876 68999998
Q ss_pred chhhhcCChh-hHHHHHHHHHhcCCCCcEEEE
Q 023787 237 QWCIGHLTDD-DFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 237 ~~~l~~~~~~-d~~~~l~~~~r~LkpGG~lii 267 (277)
.+.-..+..+ .+..++....+.|||||.++.
T Consensus 156 E~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 156 EWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 6543333322 577899999999999999875
No 156
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.55 E-value=7.4e-15 Score=118.08 Aligned_cols=96 Identities=21% Similarity=0.100 Sum_probs=79.7
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. . .++++.++|+.+ +.++++||+|++
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------~---------~~~~~~~~d~~~-~~~~~~fD~i~~ 84 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------H---------RGGNLVRADLLC-SINQESVDVVVF 84 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------C---------SSSCEEECSTTT-TBCGGGCSEEEE
T ss_pred CCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------c---------cCCeEEECChhh-hcccCCCCEEEE
Confidence 56799999999999999888776 79999999999987 1 347889999987 445579999999
Q ss_pred chhhhcCChh-------hHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 237 QWCIGHLTDD-------DFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 237 ~~~l~~~~~~-------d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+..+++.++. +...+++++.+.| |||++++.++.
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 9998865533 3457889999999 99999998653
No 157
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.54 E-value=1.8e-14 Score=121.44 Aligned_cols=102 Identities=15% Similarity=-0.010 Sum_probs=81.1
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC---CCCCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPETG 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~ 229 (277)
..++.+|||+|||+|.++..+++.. + .+|+++|+|+.|++.+.++... ..++.++++|+.+. +..++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--------RTNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------CTTEEEECSCTTCGGGGGGGCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--------cCCeEEEEcccCChhhhcccCC
Confidence 4567899999999999999998774 2 4799999999988877776654 24688999999873 33457
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+||+|++... ..+....++.++.++|||||++++.
T Consensus 147 ~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 147 MVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 9999998655 2224456788999999999999995
No 158
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.54 E-value=2.3e-14 Score=123.93 Aligned_cols=103 Identities=16% Similarity=0.168 Sum_probs=85.4
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-C-CCcEEEEeCCHHHHHHHHHHhCCC-CCCCCCCCcceeEEEcCCCCCCCCCCce
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRY 231 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~-~~~v~gvD~S~~~l~~a~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~f 231 (277)
..++.+|||+|||+|..+..+++. + ..+|+++|+|+.+++.|++++... +. .++++.++|+.+ .+++++|
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~------~~v~~~~~d~~~-~~~~~~f 180 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI------GNVRTSRSDIAD-FISDQMY 180 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC------TTEEEECSCTTT-CCCSCCE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC------CcEEEEECchhc-cCcCCCc
Confidence 557789999999999999999877 3 237999999999999999998664 32 468999999987 4455789
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|+|++ +++ +...+++++.++|||||++++....
T Consensus 181 D~Vi~-----~~~--~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 181 DAVIA-----DIP--DPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp EEEEE-----CCS--CGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred cEEEE-----cCc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99998 445 3448999999999999999998653
No 159
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.54 E-value=2.8e-15 Score=134.71 Aligned_cols=113 Identities=14% Similarity=0.132 Sum_probs=86.4
Q ss_pred cchHHHHHHHHhccCCCcCCCCCccEEEeecc------ccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHhCCCCCCC
Q 023787 136 KGSEAFLQMLLSDRFPNARNNQHLVALDCGSG------IGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMA 207 (277)
Q Consensus 136 ~~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcG------tG~~s~~l~~~~-~-~~v~gvD~S~~~l~~a~~~~~~~~~~~ 207 (277)
..+..++..++.... .++.+||||||| +|..+..+++.+ + .+|+|+|+|+.|. . .
T Consensus 200 h~y~~~Ye~lL~~l~-----~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-~----- 262 (419)
T 3sso_A 200 HWFTPHYDRHFRDYR-----NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-D----- 262 (419)
T ss_dssp CBCHHHHHHHHGGGT-----TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-C-----
T ss_pred chHHHHHHHHHHhhc-----CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-c-----
Confidence 344556666665432 356899999999 776677677664 2 2899999999983 1 1
Q ss_pred CCCCcceeEEEcCCCCCCCC------CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 208 PDMHKATNFFCVPLQDFTPE------TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 208 ~~~~~~~~~~~~d~~~~~~~------~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
..+++|+++|+.++++. +++||+|++..+ |+.. +...+|++++++|||||++++.|..
T Consensus 263 ---~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~--d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 263 ---ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HINA--HVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp ---BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCHH--HHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ---CCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccch--hHHHHHHHHHHhcCCCeEEEEEecc
Confidence 35799999999987765 579999998754 5543 7789999999999999999998765
No 160
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=1.3e-14 Score=116.78 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=83.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..++. ...+++++|+|+.+++.+++++...++ .++++++.|+.+ ++++++||+|
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~~d~~~-~~~~~~~D~i 104 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI------KNCQIIKGRAED-VLDKLEFNKA 104 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC------CSEEEEESCHHH-HGGGCCCSEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC------CcEEEEECCccc-cccCCCCcEE
Confidence 44678999999999999998886 445799999999999999999876443 458899999877 4455789999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++..+ .+...+++++.++ |||.+++...
T Consensus 105 ~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 105 FIGGT------KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp EECSC------SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred EECCc------ccHHHHHHHHhhC--CCCEEEEEec
Confidence 99988 2566899999998 9999999864
No 161
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.53 E-value=1.4e-14 Score=122.13 Aligned_cols=103 Identities=14% Similarity=0.215 Sum_probs=85.4
Q ss_pred CCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCC--CCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPE--TGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~--~~~fD 232 (277)
++.+|||+|||+|..+..++...+ .+|+++|+|+.+++.|++++...++ ..++.+..+|+.+. +.. +++||
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL-----ESRIELLFGDALQLGEKLELYPLFD 128 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGSHHHHTTSCCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECCHHHHHHhcccCCCcc
Confidence 567999999999999999988753 4899999999999999999876544 34688999988774 221 46899
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+|++....+ +...+++++.++|+|||++++.+
T Consensus 129 ~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 129 VLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEET
T ss_pred EEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEc
Confidence 999987753 56689999999999999999864
No 162
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.53 E-value=1.7e-15 Score=125.19 Aligned_cols=106 Identities=14% Similarity=0.045 Sum_probs=66.1
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC-----C
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----G 229 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~ 229 (277)
.++.+|||+|||+|..+..++..+.. +++++|+|+.|++.|++++...+. +++++++|+.+ ++++ +
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------~~~~~~~d~~~-~~~~~~~~~~ 100 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-------VVDWAAADGIE-WLIERAERGR 100 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------------CCHHHHHH-HHHHHHHTTC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-------ceEEEEcchHh-hhhhhhhccC
Confidence 57789999999999999999988654 899999999999999998876421 56777777766 3333 7
Q ss_pred ceeEEecchhhhc------CChhh------------------HHHHHHHHHhcCCCCcEEEEEe
Q 023787 230 RYDVIWVQWCIGH------LTDDD------------------FVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 230 ~fD~Vi~~~~l~~------~~~~d------------------~~~~l~~~~r~LkpGG~lii~e 269 (277)
+||+|+++..+++ ++... +..+++++.++|||||++++.+
T Consensus 101 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 101 PWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp CBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred cccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9999999755433 22111 1688999999999999955444
No 163
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.53 E-value=2.3e-14 Score=121.96 Aligned_cols=113 Identities=12% Similarity=0.128 Sum_probs=82.5
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCC--CCcceeEEEcCCCC-CC--CCCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPD--MHKATNFFCVPLQD-FT--PETG 229 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~--~~~~~~~~~~d~~~-~~--~~~~ 229 (277)
.++.+|||||||+|.++..++..++. .|+|+|+|+.+++.|++++......+.. ...++.++++|+.+ ++ ++.+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 46689999999999999999988765 7999999999999998876532000000 02468999999987 44 5678
Q ss_pred ceeEEecchhhhcCChh------hHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~------d~~~~l~~~~r~LkpGG~lii~ 268 (277)
++|.|++...-.+.... -...+++++.++|+|||+|++.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 99999855321111000 0147999999999999999986
No 164
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.53 E-value=2.7e-14 Score=122.69 Aligned_cols=97 Identities=16% Similarity=0.133 Sum_probs=82.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.++.+|||+|||+|.++..++... ..+|+++|+|+.|++.|+++. .++.+...|+.++++++++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----------PQVTFCVASSHRLPFSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----------TTSEEEECCTTSCSBCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcchhhCCCCCCceeEE
Confidence 367899999999999999888764 337999999999999999875 24788999999888777899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
++..+. .+++++.++|||||++++.....
T Consensus 153 ~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 153 IRIYAP---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp EEESCC---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred EEeCCh---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 987652 35899999999999999987543
No 165
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.52 E-value=4.8e-15 Score=118.30 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=81.0
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--C--CCCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P--ETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~--~~~~fD 232 (277)
++.+|||+|||+|..+..++..++. |+++|+|+.|++.|++++...++ ++++++.|+.+.. . ..++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGL-------GARVVALPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTC-------CCEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCC-------ceEEEeccHHHHHHhhhccCCceE
Confidence 5679999999999999999887776 99999999999999998865321 5788888887632 1 124799
Q ss_pred EEecchhhhcCChhhHHHHHHHHH--hcCCCCcEEEEEecC
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAK--VGLKPGGFFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~--r~LkpGG~lii~e~~ 271 (277)
+|+++.+++ . ....+++.+. ++|+|||++++..+.
T Consensus 113 ~i~~~~~~~--~--~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 113 VAFMAPPYA--M--DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEEECCCTT--S--CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred EEEECCCCc--h--hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 999998775 2 2335666666 999999999997553
No 166
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.52 E-value=2e-14 Score=122.59 Aligned_cols=104 Identities=21% Similarity=0.165 Sum_probs=85.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-C-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.|++++...++ ..++++.+.|+.+. +++++||
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~~~~~~D 164 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF-----DDRVTIKLKDIYEG-IEEENVD 164 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC-----TTTEEEECSCGGGC-CCCCSEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC-----CCceEEEECchhhc-cCCCCcC
Confidence 457789999999999999999987 4 34899999999999999999876544 34589999998865 4557899
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+|++. .+ +...+++++.++|+|||++++....
T Consensus 165 ~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 165 HVILD-----LP--QPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp EEEEC-----SS--CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred EEEEC-----CC--CHHHHHHHHHHHcCCCCEEEEEECC
Confidence 99984 33 3347999999999999999997653
No 167
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.52 E-value=8e-15 Score=125.54 Aligned_cols=101 Identities=17% Similarity=0.128 Sum_probs=83.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|+++...++. . +++.++|+.+. +++++||+|++
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~------~-v~~~~~d~~~~-~~~~~fD~Vv~ 190 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGV------R-PRFLEGSLEAA-LPFGPFDLLVA 190 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTC------C-CEEEESCHHHH-GGGCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCC------c-EEEEECChhhc-CcCCCCCEEEE
Confidence 568999999999999998887777 799999999999999999876543 2 77888887652 23468999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+...+ .+..++.++.++|||||++++++..
T Consensus 191 n~~~~-----~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 191 NLYAE-----LHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ECCHH-----HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCcHH-----HHHHHHHHHHHHcCCCCEEEEEeec
Confidence 86654 3558999999999999999998654
No 168
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.52 E-value=2.8e-14 Score=124.66 Aligned_cols=113 Identities=18% Similarity=0.234 Sum_probs=80.8
Q ss_pred CCCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~ 233 (277)
.++.+|||||||+|..+..+++.. ..+|+++|+|+.|++.|++++...+.. .....+++++.+|..++. ..+++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAG-SYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSS-CTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccc-cccCCceEEEEChHHHHHhhcCCCccE
Confidence 356899999999999999988653 348999999999999999987532100 001357899999987763 34578999
Q ss_pred EecchhhhcCChhhH--HHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~e 269 (277)
|++.......+...+ ..+++.+.++|+|||++++.-
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999665443333223 679999999999999999863
No 169
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.52 E-value=2.6e-14 Score=123.66 Aligned_cols=106 Identities=18% Similarity=0.208 Sum_probs=84.7
Q ss_pred CCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
++.+|||+|||+|..+..++...+. +|+++|+|+.+++.|+++....++ .+++++++|+.+. .++++||+|+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~------~~v~~~~~d~~~~-~~~~~fD~Iv 181 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI------KNIHILQSDWFSA-LAGQQFAMIV 181 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCSTTGG-GTTCCEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEEcchhhh-cccCCccEEE
Confidence 5679999999999999999876543 899999999999999999865433 3688999998764 3346899999
Q ss_pred cch-------------hhhcCCh----------hhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 236 VQW-------------CIGHLTD----------DDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 236 ~~~-------------~l~~~~~----------~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
++. +++|-|. .....+++++.++|||||++++..
T Consensus 182 ~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 182 SNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp ECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 984 3333331 346789999999999999999863
No 170
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.52 E-value=1.9e-14 Score=120.33 Aligned_cols=105 Identities=18% Similarity=0.123 Sum_probs=83.8
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-----CCC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----ETG 229 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~ 229 (277)
++.+|||||||+|..+..+++..+ .+|+++|+++.+++.|++++...++ ..+++++++|+.+... ..+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~ 132 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL-----NDRVEVRTGLALDSLQQIENEKYE 132 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 568999999999999999987753 3899999999999999999876554 3468999998865321 115
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+||+|++.... .....+++++.++|+|||++++.+..
T Consensus 133 ~fD~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 133 PFDFIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp CCSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred CcCEEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 79999987653 25568999999999999988876443
No 171
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.52 E-value=1.2e-13 Score=115.83 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=81.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC---CCCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~ 229 (277)
..++.+|||+|||+|.++..+++.. . .+|+++|+|+.|++.++++... ..++.++++|+.+.. ..++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~--------~~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE--------RRNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--------CTTEEEEECCTTCGGGGTTTCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--------cCCCEEEEccCCCcchhhcccC
Confidence 4567899999999999999998773 2 4799999999999999998876 256899999998732 1235
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+||+|++... .......++.++.++|||||++++.
T Consensus 143 ~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 8999997655 1123345699999999999999987
No 172
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.52 E-value=4e-14 Score=119.49 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=82.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (277)
..++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.|++++...++ .++.+..+|+. .++++ .+||+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~-~~~~~~~~fD~ 161 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV------KNVHVILGDGS-KGFPPKAPYDV 161 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGG-GCCGGGCCEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC------CCcEEEECCcc-cCCCCCCCccE
Confidence 456789999999999999999877645799999999999999999866443 35888888872 23332 35999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|++..+++++++ ++.+.|||||++++.-+.
T Consensus 162 Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 162 IIVTAGAPKIPE--------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EEECSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred EEECCcHHHHHH--------HHHHhcCCCcEEEEEEec
Confidence 999999998872 678899999999997543
No 173
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.52 E-value=1e-14 Score=122.05 Aligned_cols=105 Identities=13% Similarity=0.134 Sum_probs=84.2
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CC----C
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PE----T 228 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~----~ 228 (277)
++.+|||+|||+|..+..++...+ .+|+++|+|+.+++.|++++...++ ..+++++++|+.+.. .. .
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL-----SDKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHTTTCT
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC-----CCceEEEeCCHHHHHHHhhhccCC
Confidence 567999999999999999887643 3899999999999999999876554 346899999885542 11 1
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++||+|++... ..+...+++++.++|||||++++.+..
T Consensus 139 ~~fD~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 139 WQYDLIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp TCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CCccEEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 68999996554 235678999999999999999987654
No 174
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.52 E-value=1.5e-14 Score=119.99 Aligned_cols=102 Identities=12% Similarity=0.123 Sum_probs=82.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~ 233 (277)
++.+|||+|||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..+++++++|..+. +..++ ||+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL-----IDRVELQVGDPLGIAAGQRD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG-----GGGEEEEESCHHHHHTTCCS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CceEEEEEecHHHHhccCCC-CCE
Confidence 457999999999999999887643 3899999999999999998865443 34689999988654 33346 999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|++... ..+...+++++.++|||||++++.+
T Consensus 130 v~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 130 LFMDCD-----VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEETT-----TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EEEcCC-----hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 998743 2356789999999999999998854
No 175
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.51 E-value=2.6e-15 Score=127.73 Aligned_cols=105 Identities=11% Similarity=0.168 Sum_probs=85.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC------C
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------T 228 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~ 228 (277)
++.+|||||||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+.... +
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ-----EHKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHHHCS
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHhhccCC
Confidence 567999999999999999987653 3899999999999999999876655 35799999998664321 3
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++||+|++... ..+...+++++.++|||||+|++.+..
T Consensus 135 ~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 135 HQFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp SCEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CCEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 78999998754 235678999999999999999986543
No 176
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.50 E-value=9.6e-14 Score=117.03 Aligned_cols=105 Identities=14% Similarity=-0.027 Sum_probs=77.0
Q ss_pred cCCCCCccEEEeeccccHHHHHHHHhCC-C-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC---CC
Q 023787 153 ARNNQHLVALDCGSGIGRITKNLLIRYF-N-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PE 227 (277)
Q Consensus 153 ~~~~~~~~VLDiGcGtG~~s~~l~~~~~-~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~ 227 (277)
....++.+|||+|||+|..+..+++... . +|+++|+|+.|++...+.... ..++.++++|+.... ..
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--------r~nv~~i~~Da~~~~~~~~~ 143 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--------RPNIFPLLADARFPQSYKSV 143 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--------CTTEEEEECCTTCGGGTTTT
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--------cCCeEEEEcccccchhhhcc
Confidence 3467889999999999999998887633 2 799999999997655444332 246889999987642 12
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.++||+|++..+. + .....++..+.+.|||||+|+++.
T Consensus 144 ~~~~D~I~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 144 VENVDVLYVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp CCCEEEEEECCCC---T-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccceEEEEecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEE
Confidence 3689999988653 2 123344566677999999999873
No 177
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.50 E-value=1.7e-14 Score=125.31 Aligned_cols=96 Identities=14% Similarity=0.017 Sum_probs=72.9
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeE-EEcCCCCCC---CCCCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF-FCVPLQDFT---PETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~---~~~~~fD 232 (277)
++.+|||+|||||.++..+++.+..+|+++|+|+.|++.+.++.. ++.. ...++..+. ++..+||
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~-----------rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD-----------RVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT-----------TEEEECSCCGGGCCGGGCTTCCCS
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc-----------ccceecccCceecchhhCCCCCCC
Confidence 567999999999999998888877789999999999998655321 1111 112322222 2334699
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+|++..+++++. .+|.+++|+|||||.+++.
T Consensus 154 ~v~~d~sf~sl~-----~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 154 FASIDVSFISLN-----LILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EEEECCSSSCGG-----GTHHHHHHHSCTTCEEEEE
T ss_pred EEEEEeeHhhHH-----HHHHHHHHHcCcCCEEEEE
Confidence 999988887653 7999999999999999986
No 178
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.50 E-value=4.6e-14 Score=120.26 Aligned_cols=104 Identities=22% Similarity=0.245 Sum_probs=86.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-C-CCcEEEEeCCHHHHHHHHHHhCCC-CCCCCCCCcceeEEEcCCCCCCCCCCce
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRY 231 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~-~~~v~gvD~S~~~l~~a~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~f 231 (277)
..++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.|++++... + ..++++...|+.+.++++++|
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g------~~~v~~~~~d~~~~~~~~~~~ 167 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ------VENVRFHLGKLEEAELEEAAY 167 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------CCCEEEEESCGGGCCCCTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC------CCCEEEEECchhhcCCCCCCc
Confidence 457789999999999999999887 3 348999999999999999987542 2 246899999998876666799
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
|+|++. .+ +...+++++.++|+|||++++.+..
T Consensus 168 D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 168 DGVALD-----LM--EPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp EEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred CEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 999983 34 3447999999999999999998754
No 179
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.50 E-value=3.7e-14 Score=127.22 Aligned_cols=101 Identities=14% Similarity=0.271 Sum_probs=86.3
Q ss_pred CCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
+..+|||||||+|.++..+++.++. +++++|+ +.+++.+++ ..++++..+|+.+ +.+ +||+|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~~--~~D~v~ 256 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------------NENLNFVGGDMFK-SIP--SADAVL 256 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------------CSSEEEEECCTTT-CCC--CCSEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------------CCCcEEEeCccCC-CCC--CceEEE
Confidence 4579999999999999999988765 7999999 788876643 1348999999987 544 499999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCC---CcEEEEEecCCC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKP---GGFFVLKENIAR 273 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~Lkp---GG~lii~e~~~~ 273 (277)
+..++||+++++...++++++++|+| ||++++.|.+.+
T Consensus 257 ~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 257 LKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred EcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 99999999977778999999999999 999999987643
No 180
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.50 E-value=2.4e-14 Score=125.77 Aligned_cols=113 Identities=15% Similarity=0.179 Sum_probs=82.2
Q ss_pred CCCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC--CCCcee
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYD 232 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD 232 (277)
.++.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++..... .....+++++.+|+.++.. .+++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR--SLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHHhccCCcee
Confidence 456899999999999999988653 34899999999999999998731000 0003578999999876542 357999
Q ss_pred EEecchhhhcCChhhH--HHHHHHHHhcCCCCcEEEEEec
Q 023787 233 VIWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+|++....++.+...+ ..++++++++|||||++++...
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9999776655443333 5899999999999999999743
No 181
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=5.6e-14 Score=123.39 Aligned_cols=106 Identities=20% Similarity=0.249 Sum_probs=83.0
Q ss_pred CccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CCCCceeEE
Q 023787 158 HLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDVI 234 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~V 234 (277)
+.+|||||||+|..+..+++.++. +|++||+++.|++.|++++.... ..+++++.+|..++. .++++||+|
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~------~~rv~v~~~Da~~~l~~~~~~~fDvI 163 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR------APRVKIRVDDARMVAESFTPASRDVI 163 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC------TTTEEEEESCHHHHHHTCCTTCEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC------CCceEEEECcHHHHHhhccCCCCCEE
Confidence 349999999999999999985543 79999999999999999986421 357899999987652 345789999
Q ss_pred ecchhhhcCChhh--HHHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~~d--~~~~l~~~~r~LkpGG~lii~e 269 (277)
++....+...... ...++++++++|+|||+|++.-
T Consensus 164 i~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 164 IRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp EECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 9865433222122 1579999999999999999864
No 182
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.49 E-value=2.4e-14 Score=114.29 Aligned_cols=101 Identities=13% Similarity=0.112 Sum_probs=81.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-CC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+|||+|||+|.++..+++. ++ .+++++|+|+ |++. .++++.+.|+.+.+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------------~~~~~~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------------VGVDFLQGDFRDELVMKALLE 82 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------------TTEEEEESCTTSHHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------------CcEEEEEcccccchhhhhhhc
Confidence 346779999999999999999887 34 4899999998 6531 35788999998865
Q ss_pred -CCCCceeEEecchhhhcCChhh---------HHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDD---------FVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d---------~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+++++||+|+++.++++..... ...+++++.++|+|||.+++.+...
T Consensus 83 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 83 RVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred cCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 5667999999998888775321 1589999999999999999986543
No 183
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.49 E-value=8.6e-15 Score=117.96 Aligned_cols=91 Identities=13% Similarity=0.154 Sum_probs=78.3
Q ss_pred CCCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC---CCCc
Q 023787 154 RNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGR 230 (277)
Q Consensus 154 ~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~ 230 (277)
...++.+|||+|||. | ++|+|+.|++.|+++... ++++.++|+.++++ ++++
T Consensus 9 g~~~g~~vL~~~~g~--------------v-~vD~s~~ml~~a~~~~~~----------~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS--------------S-PVEALKGLVDKLQALTGN----------EGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp TCCTTSEEEEEECTT--------------S-CHHHHHHHHHHHHHHTTT----------TSEEEEEEGGGGGGGCCCSSC
T ss_pred CCCCCCEEEEecCCc--------------e-eeeCCHHHHHHHHHhccc----------CcEEEEechhcCccccCCCCC
Confidence 356789999999996 2 399999999999998643 37889999988876 6789
Q ss_pred eeEEecchhhhcC-ChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 231 YDVIWVQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 231 fD~Vi~~~~l~~~-~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
||+|+++.++||+ + +...++++++|+|||||++++.+..
T Consensus 64 fD~V~~~~~l~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 64 FDIILSGLVPGSTTL--HSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp EEEEEECCSTTCCCC--CCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeEEEECChhhhccc--CHHHHHHHHHHHCCCCEEEEEEccc
Confidence 9999999999999 6 5579999999999999999997553
No 184
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.49 E-value=2.9e-14 Score=121.60 Aligned_cols=103 Identities=15% Similarity=0.169 Sum_probs=84.0
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-C-C-----C
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-P-----E 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~ 227 (277)
++.+|||||||+|..+..++...+ .+|+++|+|+.+++.|++++...++ ..+++++.+|..+. + . +
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV-----DHKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHSGGG
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHHHHHHhccCC
Confidence 457999999999999999988754 3899999999999999999876554 45799999988654 2 1 1
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+++||+|++... ..+...+++++.++|||||++++.+
T Consensus 154 ~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 154 HGSYDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TTCBSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCCEEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 478999998654 2256789999999999999998754
No 185
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.49 E-value=3.6e-14 Score=118.89 Aligned_cols=106 Identities=20% Similarity=0.174 Sum_probs=83.4
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC------CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC---
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--- 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~------~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 225 (277)
..++.+|||+|||+|..+..++.... .+|+++|+|+.+++.|++++...++... ...++++..+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELL-KIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGG-SSTTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcccc-ccCCEEEEECChHhccccc
Confidence 34678999999999999999887754 2799999999999999998765321000 0146889999988754
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...++||+|++..+++++. +++.+.|||||++++.-
T Consensus 157 ~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPI 193 (227)
T ss_dssp HHHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEE
Confidence 4457899999999887754 66789999999999874
No 186
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.48 E-value=1.7e-13 Score=116.11 Aligned_cols=103 Identities=22% Similarity=0.284 Sum_probs=84.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++....++ ..++++...|+.+...++++||+|
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v 162 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNL-----GKNVKFFNVDFKDAEVPEGIFHAA 162 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTC-----CTTEEEECSCTTTSCCCTTCBSEE
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCC-----CCcEEEEEcChhhcccCCCcccEE
Confidence 456789999999999999999887 55799999999999999998865443 356889999988755345689999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++. .+ +...+++++.++|+|||++++...
T Consensus 163 ~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 163 FVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp EEC-----SS--CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred EEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 974 33 344789999999999999999765
No 187
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.48 E-value=1.9e-14 Score=121.75 Aligned_cols=103 Identities=10% Similarity=0.107 Sum_probs=83.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-C--------
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-------- 225 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-------- 225 (277)
++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..++.+.++|+.+. +
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~~~~~~~~~~~ 134 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL-----ENKIFLKLGSALETLQVLIDSKSA 134 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHCSSC
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHHHHHHHHHhhccc
Confidence 567999999999999999998753 4899999999999999999876544 34588998887542 1
Q ss_pred ------CCC--CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 ------PET--GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 ------~~~--~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+++ ++||+|++.... .+...+++++.++|+|||++++.+
T Consensus 135 ~~~~~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 135 PSWASDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp CGGGTTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 122 689999988553 356689999999999999999875
No 188
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=3.8e-14 Score=122.59 Aligned_cols=105 Identities=18% Similarity=0.108 Sum_probs=87.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||+|||+|.++..++.... .+|+++|+|+.+++.|++++..+++ .++.++++|+.+++ ..++||+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l------~~~~~~~~d~~~~~-~~~~~D~ 189 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL------NNVIPILADNRDVE-LKDVADR 189 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC------SSEEEEESCGGGCC-CTTCEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEECChHHcC-ccCCceE
Confidence 34678999999999999999987753 3799999999999999999877654 45789999998873 3568999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
|++.... +...++.++.+.|+|||+++++++..
T Consensus 190 Vi~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 190 VIMGYVH------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECCcc------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 9988664 34478999999999999999987754
No 189
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.48 E-value=1.8e-14 Score=121.81 Aligned_cols=100 Identities=17% Similarity=0.023 Sum_probs=68.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE-cCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~fD~V 234 (277)
.++.+|||||||||.++..+++.+..+|+|+|+|+.|++.++++........ ..++.+.. .++....+...+||++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~D~v 112 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVME---QFNFRNAVLADFEQGRPSFTSIDVS 112 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEEC---SCCGGGCCGGGCCSCCCSEEEECCS
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccc---cceEEEeCHhHcCcCCCCEEEEEEE
Confidence 3567999999999999999998876689999999999999887643210000 01222222 2333211233456665
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+++. ..++++++++|||||.+++.
T Consensus 113 ~~~l----------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 113 FISL----------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SSCG----------GGTHHHHHHHSCTTCEEEEE
T ss_pred hhhH----------HHHHHHHHHhccCCCEEEEE
Confidence 5542 37999999999999999986
No 190
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=9.6e-14 Score=116.19 Aligned_cols=107 Identities=20% Similarity=0.191 Sum_probs=83.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||+|||+|..+..+++.. . .+|+++|+|+.+++.+++++...+.... ...++.+.+.|+......+++||
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL-SSGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH-HTSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccc-CCCcEEEEECCcccCcccCCCcC
Confidence 3467899999999999999888764 3 3799999999999999988754221000 01368899999876555557899
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+|++..+++++. +++.++|||||++++...
T Consensus 154 ~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 154 AIHVGAAAPVVP--------QALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEECSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHHH--------HHHHHhcCCCcEEEEEEe
Confidence 999998887655 478899999999999754
No 191
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.47 E-value=2.4e-13 Score=118.20 Aligned_cols=105 Identities=12% Similarity=0.032 Sum_probs=81.4
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCce---eE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY---DV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f---D~ 233 (277)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.|+++....++ ..+++|+++|+.+.. + ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l-----~~~v~~~~~D~~~~~-~-~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGV-----SDRFFVRKGEFLEPF-K-EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTSEEEEESSTTGGG-G-GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECcchhhc-c-cccCCCCE
Confidence 4569999999999999999887223799999999999999999876554 335899999998732 2 478 99
Q ss_pred Eecchhhh-----------cCCh------hhHHHHHHHHH-hcCCCCcEEEEE
Q 023787 234 IWVQWCIG-----------HLTD------DDFVSFFKRAK-VGLKPGGFFVLK 268 (277)
Q Consensus 234 Vi~~~~l~-----------~~~~------~d~~~~l~~~~-r~LkpGG~lii~ 268 (277)
|+++.... |-+. .+...+++++. +.|+|||++++.
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 99973211 2221 12237899999 999999999984
No 192
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.46 E-value=1.2e-13 Score=117.04 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=83.7
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--C-----C
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P-----E 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~-----~ 227 (277)
++.+|||||||+|..+..+++..+ .+|+++|+|+.+++.|++++...++ ..+++++.+|..+.. . +
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV-----EHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHSTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhccCC
Confidence 567999999999999999998754 3899999999999999999876554 457899999876541 1 1
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+++||+|++... ..+...+++.+.++|+|||++++.+
T Consensus 145 ~~~fD~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 145 EGSYDFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcCEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 468999997643 2366789999999999999998754
No 193
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.46 E-value=2.1e-13 Score=122.10 Aligned_cols=110 Identities=19% Similarity=0.090 Sum_probs=89.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||+|||+|.++..++..+ + .+++|+|+|+.|++.|++++...++ . ++++.+.|+.+++.+..+||
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~-----~-~i~~~~~D~~~~~~~~~~~D 274 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL-----S-WIRFLRADARHLPRFFPEVD 274 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC-----T-TCEEEECCGGGGGGTCCCCS
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC-----C-ceEEEeCChhhCccccCCCC
Confidence 4567899999999999999988765 2 3799999999999999999887654 2 78999999999876667899
Q ss_pred EEecchhhhcCCh------hhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 233 VIWVQWCIGHLTD------DDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~~~l~~~~~------~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+|+++..+..... .....+++++.++|||||.+++...
T Consensus 275 ~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 275 RILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp EEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred EEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9999766443211 1236899999999999999999743
No 194
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.46 E-value=1.1e-13 Score=119.61 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=85.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-CC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||+|||+|.++..++.. ++ .+|+++|+|+.+++.|++++...++ ..++++...|+.+. +++++||
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~~~~~~D 183 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL-----IERVTIKVRDISEG-FDEKDVD 183 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC-----GGGEEEECCCGGGC-CSCCSEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHHHc-ccCCccC
Confidence 456789999999999999999887 43 4899999999999999999866443 35788999998776 4557899
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+|++. .+ +...+++++.++|+|||++++.+..
T Consensus 184 ~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 184 ALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp EEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred EEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99984 33 3447999999999999999998653
No 195
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.46 E-value=8.3e-14 Score=120.35 Aligned_cols=105 Identities=17% Similarity=0.131 Sum_probs=85.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-C-CCcEEEEeCCHHHHHHHHHHhCCC-C-CCCCCCCcceeEEEcCCCCCCCCCCc
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPE-N-HMAPDMHKATNFFCVPLQDFTPETGR 230 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~-~~~v~gvD~S~~~l~~a~~~~~~~-~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 230 (277)
..++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.|++++... + + ..++++.+.|+.+.++++++
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~-----~~~v~~~~~d~~~~~~~~~~ 171 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP-----PDNWRLVVSDLADSELPDGS 171 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC-----CTTEEEECSCGGGCCCCTTC
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-----CCcEEEEECchHhcCCCCCc
Confidence 457789999999999999999875 2 347999999999999999987543 2 1 24689999999888766789
Q ss_pred eeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 231 fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
||+|++. ++ +...+++++.++|+|||++++....
T Consensus 172 ~D~v~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 172 VDRAVLD-----ML--APWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp EEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred eeEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 9999983 33 3337999999999999999997653
No 196
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.46 E-value=7.6e-14 Score=117.73 Aligned_cols=104 Identities=12% Similarity=0.149 Sum_probs=83.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC----CCCC--
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPET-- 228 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~-- 228 (277)
++.+|||||||+|..+..++...+ .+|+++|+|+.+++.|++++...++ ..+++++.+|+.+. +.++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV-----AEKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHHHHHHTSSSC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 457999999999999999887654 3899999999999999998865444 35689999886442 2222
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++||+|++... ..+...+++++.++|+|||++++.+.
T Consensus 147 ~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 147 PEFDLIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp CCEEEEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred CCcCEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 68999997654 23667899999999999999998654
No 197
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.46 E-value=3.3e-14 Score=119.35 Aligned_cols=107 Identities=15% Similarity=0.109 Sum_probs=81.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-------CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE 227 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-------~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 227 (277)
..++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...+... ....++++...|..+....
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM-LDSGQLLIVEGDGRKGYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH-HHHTSEEEEESCGGGCCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccc-cCCCceEEEECCcccCCCc
Confidence 34678999999999999998887533 379999999999999999875421000 0013588899998762222
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.++||+|++..+++++. +++.+.|||||++++.-.
T Consensus 161 ~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 161 NAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp GCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 36899999999998876 568899999999999744
No 198
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.46 E-value=4.9e-14 Score=125.25 Aligned_cols=110 Identities=14% Similarity=0.067 Sum_probs=85.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC----CCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~fD 232 (277)
++.+|||+|||+|.++..++..+. +|+++|+|+.+++.|++++..+++. ..+++++++|+.++... .++||
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~----~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLE----QAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCT----TSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECcHHHHHHHHHhcCCCce
Confidence 567999999999999999998777 7999999999999999998765441 12488999998765321 36899
Q ss_pred EEecchhhhcCC--------hhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 233 VIWVQWCIGHLT--------DDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~--------~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+|++........ ..+...+++++.++|+|||++++...+
T Consensus 228 ~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 228 IILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp EEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred EEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 999854311110 235778999999999999998876544
No 199
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.46 E-value=2e-13 Score=112.21 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=75.2
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|+++.. +++++++|+.+++ ++||+|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~---~~~D~v~ 115 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----------GVNFMVADVSEIS---GKYDTWI 115 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCGGGCC---CCEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----------CCEEEECcHHHCC---CCeeEEE
Confidence 4667999999999999998887755579999999999999999864 4788999998864 6899999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
++..+++........+++++.+.+ |+ +++.
T Consensus 116 ~~~p~~~~~~~~~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp ECCCC-------CHHHHHHHHHHE--EE-EEEE
T ss_pred ECCCchhccCchhHHHHHHHHHhc--Cc-EEEE
Confidence 999999987544457899999998 45 4444
No 200
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.46 E-value=1.6e-13 Score=112.57 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=76.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC---CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~---~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
.++.+|||+|||+|.++..+++... .+|+|+|+|+.. . ..++.+.++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~--------~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P--------IPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C--------CTTCEEEECCTTTTSSCCC---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C--------CCCceEEEccccchhhhhhccc
Confidence 4668999999999999999998764 489999999821 1 245788999998765
Q ss_pred ------------------CCCCceeEEecchhhhcCCh--hh-------HHHHHHHHHhcCCCCcEEEEEec
Q 023787 226 ------------------PETGRYDVIWVQWCIGHLTD--DD-------FVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 226 ------------------~~~~~fD~Vi~~~~l~~~~~--~d-------~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+++++||+|++..++++... .+ ...+++++.++|||||.|++...
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 45579999999887766421 12 12488999999999999998643
No 201
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.46 E-value=9e-15 Score=124.81 Aligned_cols=107 Identities=13% Similarity=-0.031 Sum_probs=74.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC---CCC---CC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE---TG 229 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~---~~ 229 (277)
++.+|||+|||+|.++..++...+ .+|+++|+|+.|++.|++++...++ ..+++++++|+.+. +++ ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL-----SDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC-----CccEEEEEcchhhhhhhhhhcccCC
Confidence 567999999999999988887642 4799999999999999999876544 34589999997662 233 25
Q ss_pred ceeEEecchhhhcCCh-------------hhHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTD-------------DDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~-------------~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+||+|+++..+++... +....++.+++++|||||.+.+.
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 8999999866554330 11224567777777887766554
No 202
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.45 E-value=1.8e-13 Score=114.94 Aligned_cols=107 Identities=16% Similarity=0.002 Sum_probs=88.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.++.+|||||||+|.++..++..++. +|+++|+++.+++.|++++..+++ ..++++.++|..+...+..+||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl-----~~~I~~~~gD~l~~~~~~~~~D~I 94 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL-----TSKIDVRLANGLSAFEEADNIDTI 94 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECchhhccccccccCEE
Confidence 36789999999999999999887654 799999999999999999988766 457999999988765543479999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++.+... +-+..++....+.|+++|+|+++-+.
T Consensus 95 viaGmGg----~lI~~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 95 TICGMGG----RLIADILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp EEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred EEeCCch----HHHHHHHHHHHHHhCcCCEEEEECCC
Confidence 8766533 25668999999999999999998654
No 203
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.45 E-value=3.8e-14 Score=122.08 Aligned_cols=107 Identities=15% Similarity=0.041 Sum_probs=75.8
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEE--EcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~fD 232 (277)
..++.+|||+|||+|.++..+++. .+|+|||+|+ |+..+++. .........++.++ ++|+.+++ +++||
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~----~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEV----PRITESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCC----CCCCCBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhh----hhhhhccCCCeEEEecccCHhHCC--CCCCc
Confidence 456789999999999999988766 5699999998 54322211 10000011268888 88998876 57899
Q ss_pred EEecchhhhcCChh--h---HHHHHHHHHhcCCCCc--EEEEEecC
Q 023787 233 VIWVQWCIGHLTDD--D---FVSFFKRAKVGLKPGG--FFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~--d---~~~~l~~~~r~LkpGG--~lii~e~~ 271 (277)
+|+|..+ ++.+.. + ...++..+.++||||| .|++....
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9999877 444321 1 1137899999999999 99987654
No 204
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.45 E-value=6.4e-14 Score=118.64 Aligned_cols=97 Identities=11% Similarity=0.050 Sum_probs=77.7
Q ss_pred CCccEEEeeccccHHHHHHHHh----CC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC---CC-C
Q 023787 157 QHLVALDCGSGIGRITKNLLIR----YF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TP-E 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~----~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~-~ 227 (277)
++.+|||||||+|..+..+++. +. .+|+++|+|+.|++.|+. . ..+++++++|+.+. +. .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-~----------~~~v~~~~gD~~~~~~l~~~~ 149 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-D----------MENITLHQGDCSDLTTFEHLR 149 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-G----------CTTEEEEECCSSCSGGGGGGS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-c----------CCceEEEECcchhHHHHHhhc
Confidence 4579999999999999988876 23 389999999999988872 1 24689999999885 43 2
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHh-cCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKV-GLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r-~LkpGG~lii~e 269 (277)
..+||+|++... |. +...++.++.+ +|||||++++.+
T Consensus 150 ~~~fD~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 150 EMAHPLIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSCSSEEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred cCCCCEEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 347999998665 32 56689999997 999999999965
No 205
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.45 E-value=1.1e-13 Score=123.02 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=82.3
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCC--CCCCCCCCcceeEEEcCCCCC--CCCCCc
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF--TPETGR 230 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~--~~~~~~~~~~~~~~~~d~~~~--~~~~~~ 230 (277)
..+.+|||||||+|..+..+++... .+|+++|+|+.|++.|++++... ++ ...+++++.+|+.++ ..++++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl----~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY----EDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----GSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc----CCCcEEEEECCHHHHHHhccCCC
Confidence 3568999999999999999886543 48999999999999999987531 11 025689999997664 123478
Q ss_pred eeEEecchhhhcCChhh--HHHHHHHHHhcCCCCcEEEEE
Q 023787 231 YDVIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 231 fD~Vi~~~~l~~~~~~d--~~~~l~~~~r~LkpGG~lii~ 268 (277)
||+|++.......+... ...+++++.++|+|||+|++.
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99999865421111112 368999999999999999996
No 206
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.44 E-value=2.2e-13 Score=114.14 Aligned_cols=106 Identities=16% Similarity=0.026 Sum_probs=85.5
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
+++.+|||||||+|.++..++..++. +|+++|+++.+++.|++++..+++ ..++++..+|..+...+..+||+|
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~i~~~~~d~l~~l~~~~~~D~I 88 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL-----KEKIQVRLANGLAAFEETDQVSVI 88 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECchhhhcccCcCCCEE
Confidence 36689999999999999999887654 799999999999999999988766 357999999985422221269999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++.+.- .+-+..++..+...|+|+|+|+++-+
T Consensus 89 viaG~G----g~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 89 TIAGMG----GRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEEEC----HHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEcCCC----hHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 976542 22466899999999999999999755
No 207
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.44 E-value=1.6e-13 Score=121.06 Aligned_cols=110 Identities=17% Similarity=0.157 Sum_probs=85.1
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (277)
..++.+|||+|||+|..+..++.... .+|+++|+|+.+++.+++++...++ .++.+++.|+.+++..+++||
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~------~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV------LNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC------CSEEEESSCGGGGGGGCCCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC------CeEEEEECChhhcccccccCC
Confidence 45778999999999999999987653 3799999999999999999876543 368899999887754456899
Q ss_pred EEecch------hhhcCCh-------hh-------HHHHHHHHHhcCCCCcEEEEEec
Q 023787 233 VIWVQW------CIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~~------~l~~~~~-------~d-------~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+|++.. ++++.++ .+ ...+++++.++|||||+++++..
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 999742 2333221 11 25899999999999999999753
No 208
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.44 E-value=6.6e-14 Score=121.61 Aligned_cols=111 Identities=15% Similarity=0.158 Sum_probs=80.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCC--CCC---CCCCCcceeEEEcCCCCCCCCCCce
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE--NHM---APDMHKATNFFCVPLQDFTPETGRY 231 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~---~~~~~~~~~~~~~d~~~~~~~~~~f 231 (277)
.+.+|||||||+|..+..+++....+|+++|+++.+++.|++++ .. ++. ......+++++.+|+.++...+++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 56799999999999999988763448999999999999999998 32 110 0001357899999875531114689
Q ss_pred eEEecchhhhcCChhh--HHHHHHHHHhcCCCCcEEEEE
Q 023787 232 DVIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d--~~~~l~~~~r~LkpGG~lii~ 268 (277)
|+|++....+..+... ...+++++.++|+|||++++.
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9999876532222122 257999999999999999986
No 209
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.44 E-value=2.7e-13 Score=114.67 Aligned_cols=107 Identities=12% Similarity=-0.005 Sum_probs=88.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.++.+|||||||+|.++..++..++. +|+++|+++.+++.|++++..+++ ..++++.++|..+...+..+||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~I~v~~gD~l~~~~~~~~~D~I 94 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL-----TEQIDVRKGNGLAVIEKKDAIDTI 94 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEecchhhccCccccccEE
Confidence 36689999999999999999887654 799999999999999999987766 456899999987765443369999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
++.+..- +-+..++.+..+.|+++|+|+++-+.
T Consensus 95 viagmGg----~lI~~IL~~~~~~L~~~~~lIlq~~~ 127 (244)
T 3gnl_A 95 VIAGMGG----TLIRTILEEGAAKLAGVTKLILQPNI 127 (244)
T ss_dssp EEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred EEeCCch----HHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 8765432 35668999999999999999998654
No 210
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.43 E-value=7.9e-14 Score=116.86 Aligned_cols=104 Identities=19% Similarity=0.199 Sum_probs=83.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CC----C
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PE----T 228 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~----~ 228 (277)
++.+|||+|||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+.. .. .
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~~~~~~~~~~~ 143 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA-----EHKIDLRLKPALETLDELLAAGEA 143 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTTCT
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CCeEEEEEcCHHHHHHHHHhcCCC
Confidence 567999999999999998887643 3899999999999999999876544 357899998875431 11 1
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++||+|++... ..+...+++++.++|+|||++++.+.
T Consensus 144 ~~~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 144 GTFDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp TCEEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 68999998654 23566899999999999999998654
No 211
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.43 E-value=1.8e-13 Score=119.06 Aligned_cols=112 Identities=21% Similarity=0.255 Sum_probs=84.6
Q ss_pred CCCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~ 233 (277)
.++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++...+.. ....+++++.+|+.++. ..+++||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG--YEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG--GGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccc--cCCCcEEEEECChHHHHHhCCCCceE
Confidence 356899999999999999888654 248999999999999999998642110 01357899999886642 22478999
Q ss_pred EecchhhhcCChhhH--HHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~e 269 (277)
|++....+..+...+ ..+++.++++|+|||++++.-
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 998654333332333 589999999999999999873
No 212
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.42 E-value=1.2e-13 Score=119.70 Aligned_cols=107 Identities=11% Similarity=0.037 Sum_probs=76.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEE--EcCCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~fD 232 (277)
..++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..++++. ........++.++ ++|+.+++ +++||
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~----~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 150 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKP----RLVETFGWNLITFKSKVDVTKME--PFQAD 150 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCC----CCCCCTTGGGEEEECSCCGGGCC--CCCCS
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhch----hhhhhcCCCeEEEeccCcHhhCC--CCCcC
Confidence 456789999999999999988866 5799999998 643332211 1000112268888 88988865 57899
Q ss_pred EEecchhhhcCChh--h---HHHHHHHHHhcCCCCc--EEEEEecC
Q 023787 233 VIWVQWCIGHLTDD--D---FVSFFKRAKVGLKPGG--FFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~--d---~~~~l~~~~r~LkpGG--~lii~e~~ 271 (277)
+|+|..+ ++.+.. + ...+++.+.++||||| .|++....
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9999877 443321 1 1137899999999999 99986544
No 213
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.42 E-value=1.6e-13 Score=118.77 Aligned_cols=108 Identities=17% Similarity=0.170 Sum_probs=82.2
Q ss_pred CCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCC--CCCCCCCCcceeEEEcCCCCC-CCCCCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~--~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD 232 (277)
.+.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++... ++ ...+++++.+|..++ +..+++||
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~----~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL----DDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT----TSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc----CCCceEEEECcHHHHHhhCCCCee
Confidence 56899999999999999888663 358999999999999999987421 11 135789999998664 22347899
Q ss_pred EEecchhhhcCChhh--HHHHHHHHHhcCCCCcEEEEE
Q 023787 233 VIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d--~~~~l~~~~r~LkpGG~lii~ 268 (277)
+|++....+..+... ...++++++++|+|||++++.
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 999865543222111 247999999999999999986
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.41 E-value=1.4e-13 Score=121.37 Aligned_cols=109 Identities=16% Similarity=0.257 Sum_probs=83.4
Q ss_pred CCCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCC--CC-CCCCCCCcceeEEEcCCCCC-CCCCCc
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAP--EN-HMAPDMHKATNFFCVPLQDF-TPETGR 230 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~--~~-~~~~~~~~~~~~~~~d~~~~-~~~~~~ 230 (277)
..+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++.. .+ + ...+++++.+|+.++ +..+++
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~----~~~~v~~~~~D~~~~l~~~~~~ 151 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAF----DDPRAVLVIDDARAYLERTEER 151 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG----GCTTEEEEESCHHHHHHHCCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccc----cCCceEEEEchHHHHHHhcCCC
Confidence 356899999999999999888653 34899999999999999998742 11 0 025689999998764 223578
Q ss_pred eeEEecchhhhc---CChhh--HHHHHHHHHhcCCCCcEEEEE
Q 023787 231 YDVIWVQWCIGH---LTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 231 fD~Vi~~~~l~~---~~~~d--~~~~l~~~~r~LkpGG~lii~ 268 (277)
||+|++....+. -+... ...++++++++|||||++++.
T Consensus 152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 999999766544 21112 368999999999999999986
No 215
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.41 E-value=1.6e-13 Score=120.89 Aligned_cols=111 Identities=20% Similarity=0.236 Sum_probs=79.4
Q ss_pred CCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~V 234 (277)
.+.+|||||||+|..+..+++... .+|+++|+|+.+++.|++++..... .....+++++.+|+.++ +..+++||+|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~--~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSC--GFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSG--GGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcc--ccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 557999999999999998886543 4899999999999999999864210 00135789999987653 2234789999
Q ss_pred ecchhhhcCChhhH--HHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~e 269 (277)
++....+.-+...+ ..+++++.++|+|||++++..
T Consensus 186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 98654322222222 689999999999999999864
No 216
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.41 E-value=1.4e-13 Score=120.79 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=80.5
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCC--CCCCCCCCCcceeEEEcCCCCC-CCCCCce
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAP--ENHMAPDMHKATNFFCVPLQDF-TPETGRY 231 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~--~~~~~~~~~~~~~~~~~d~~~~-~~~~~~f 231 (277)
..+.+|||||||+|..+..+++... .+|+++|+|+.+++.|++++.. .++ ...+++++.+|+.++ +..+++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~----~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY----SSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----GCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc----CCCcEEEEECcHHHHHhhCCCCc
Confidence 3568999999999999999886643 4899999999999999998743 111 025689999987653 2234789
Q ss_pred eEEecchhhhcCChh--hHHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~--d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|++....+..+.. ....+++++.++|+|||++++..
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999986554322211 12478999999999999999864
No 217
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.41 E-value=8.7e-13 Score=117.24 Aligned_cols=109 Identities=16% Similarity=0.074 Sum_probs=80.1
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-CC-CcEEEEeCCHHHHHHHHHHhCCCC----CCCC-CCCcceeEEEcCCCCC--C
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPEN----HMAP-DMHKATNFFCVPLQDF--T 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~-~~v~gvD~S~~~l~~a~~~~~~~~----~~~~-~~~~~~~~~~~d~~~~--~ 225 (277)
..++.+|||+|||+|.++..++.. ++ .+|+++|+|+.+++.|++++...+ +... ....++++..+|+.+. +
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 457789999999999999999877 44 489999999999999999876311 0000 0024689999999886 3
Q ss_pred CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+++++||+|++... +...++.++.++|||||++++...
T Consensus 183 ~~~~~fD~V~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 183 IKSLTFDAVALDML-------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -----EEEEEECSS-------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred cCCCCeeEEEECCC-------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 45578999998543 122488999999999999998754
No 218
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.40 E-value=1.2e-12 Score=107.82 Aligned_cols=100 Identities=19% Similarity=0.172 Sum_probs=82.3
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+++++...++ +++++++|+.+++ ++||+|+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------~~~~~~~d~~~~~---~~~D~v~ 117 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-------KFKVFIGDVSEFN---SRVDIVI 117 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-------SEEEEESCGGGCC---CCCSEEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-------CEEEEECchHHcC---CCCCEEE
Confidence 46789999999999999999877666799999999999999999876432 5889999998864 4899999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
++..+++........+++++.+.+ ||.+++
T Consensus 118 ~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp ECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred EcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 999888776445567899999998 555443
No 219
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.40 E-value=2.4e-13 Score=123.66 Aligned_cols=110 Identities=13% Similarity=0.056 Sum_probs=87.9
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC----CCCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD 232 (277)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++..+++ ..+++++++|+.++.. +.++||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~-----~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV-----EDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CccceEEECCHHHHHHHHHhhCCCCC
Confidence 5689999999999999999877666899999999999999999877654 2378999999876532 246899
Q ss_pred EEecchhhhcCCh-------hhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~~-------~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+|++.......+. .+...++.++.++|+|||+++++.+.
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9998643322111 35678999999999999999988654
No 220
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.40 E-value=6.9e-13 Score=119.70 Aligned_cols=99 Identities=10% Similarity=0.067 Sum_probs=82.4
Q ss_pred CCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC-CCC-CCCceeE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTP-ETGRYDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~fD~ 233 (277)
++.+|||+| |+|.++..++..++ .+|+++|+|+.|++.|++++...++ . +++++++|+.+ ++. .+++||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~-----~-~v~~~~~D~~~~l~~~~~~~fD~ 244 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY-----E-DIEIFTFDLRKPLPDYALHKFDT 244 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC-----C-CEEEECCCTTSCCCTTTSSCBSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----C-CEEEEEChhhhhchhhccCCccE
Confidence 568999999 99999999988776 5899999999999999999876543 2 68999999988 553 3468999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEE
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFF 265 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~l 265 (277)
|+++..++.. ....+++++.++|||||.+
T Consensus 245 Vi~~~p~~~~---~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 245 FITDPPETLE---AIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp EEECCCSSHH---HHHHHHHHHHHTBCSTTCE
T ss_pred EEECCCCchH---HHHHHHHHHHHHcccCCeE
Confidence 9998765442 2478999999999999954
No 221
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.40 E-value=1.1e-13 Score=125.37 Aligned_cols=111 Identities=10% Similarity=0.073 Sum_probs=86.8
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCc-ceeEEEcCCCCCCC----CCCce
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTP----ETGRY 231 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~----~~~~f 231 (277)
++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++..+++ .. +++|+++|+.++.. ...+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~-----~~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHL-----DMANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTC-----CCTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECCHHHHHHHHHHhCCCc
Confidence 5679999999999999999876776899999999999999999887655 22 78999999876421 23589
Q ss_pred eEEecchhh-----hcCC--hhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 232 DVIWVQWCI-----GHLT--DDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 232 D~Vi~~~~l-----~~~~--~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
|+|++.... .+.. ..++..++..+.++|+|||+++++.+..
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999986443 1222 1245668889999999999999986643
No 222
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.40 E-value=2.6e-13 Score=120.05 Aligned_cols=111 Identities=22% Similarity=0.266 Sum_probs=82.2
Q ss_pred CCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeEE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~V 234 (277)
++.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++.... +.....+++++++|+.++. ..+++||+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~--~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS--CGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS--GGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc--cccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 56799999999999999888653 3489999999999999999986520 0000257899999876532 224689999
Q ss_pred ecchhhhcCChhhH--HHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~~d~--~~~l~~~~r~LkpGG~lii~e 269 (277)
++...-..-+...+ ..+++++.++|+|||++++.-
T Consensus 194 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 194 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 98653211111222 689999999999999999963
No 223
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.40 E-value=3e-13 Score=116.25 Aligned_cols=98 Identities=15% Similarity=0.059 Sum_probs=79.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCC--CCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.+.+|||||||+|..+..+++.. .+|+++|+++.|++.|++++... ++ ...+++++.+|..++. ++||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~----~~~rv~~~~~D~~~~~---~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVK----NNKNFTHAKQLLDLDI---KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHH----TCTTEEEESSGGGSCC---CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhcccc----CCCeEEEEechHHHHH---hhCCEE
Confidence 56799999999999999888774 78999999999999999876431 11 0356888989987765 689999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
++.. + +...+++.+.+.|+|||++++..
T Consensus 144 i~d~-----~--dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 144 FCLQ-----E--PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp EESS-----C--CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EECC-----C--ChHHHHHHHHHhcCCCcEEEEEc
Confidence 9863 2 22259999999999999999863
No 224
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.40 E-value=7.7e-13 Score=110.96 Aligned_cols=118 Identities=11% Similarity=-0.013 Sum_probs=93.9
Q ss_pred cccchHHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcc
Q 023787 134 DIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA 213 (277)
Q Consensus 134 ~~~~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~ 213 (277)
.++....++...+.. .++.+|||||||+|.++..++ ....|+++|+++.|++.+++++... ..+
T Consensus 89 rLp~ld~fY~~i~~~-------~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~-------g~~ 152 (253)
T 3frh_A 89 RLAELDTLYDFIFSA-------ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREK-------DWD 152 (253)
T ss_dssp HGGGHHHHHHHHTSS-------CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHT-------TCE
T ss_pred HhhhHHHHHHHHhcC-------CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhc-------CCC
Confidence 355555555554432 367899999999999999776 4448999999999999999997654 356
Q ss_pred eeEEEcCCCCCCCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 214 TNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 214 ~~~~~~d~~~~~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
..+.+.|+...+++ ++||+|++.-++||+.+.+....+ ++...|+++|+++-.+
T Consensus 153 ~~~~v~D~~~~~~~-~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 153 FTFALQDVLCAPPA-EAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp EEEEECCTTTSCCC-CBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred ceEEEeecccCCCC-CCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 78899999887766 599999999999999766555555 8888999999988776
No 225
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.39 E-value=3.1e-13 Score=116.93 Aligned_cols=110 Identities=13% Similarity=0.018 Sum_probs=84.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC----CC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ET 228 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~ 228 (277)
..++.+|||+|||+|..+..+++... .+|+++|+|+.+++.+++++...++ .++++++.|+.+++. ..
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV------LNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCHHHHHHHHHHTT
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC------CcEEEEeCChHhcchhhhhcc
Confidence 45678999999999999999987532 4799999999999999999876543 368899999877643 24
Q ss_pred CceeEEecchh------hhcC---C-------hhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 229 GRYDVIWVQWC------IGHL---T-------DDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 229 ~~fD~Vi~~~~------l~~~---~-------~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++||+|++... +++- . ......+++++.++|||||+++++..
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 68999998632 2110 0 02346899999999999999999753
No 226
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.38 E-value=3.4e-13 Score=114.17 Aligned_cols=123 Identities=11% Similarity=-0.017 Sum_probs=98.0
Q ss_pred ccccchHHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCC
Q 023787 133 VDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMH 211 (277)
Q Consensus 133 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~ 211 (277)
..++....|+..++... .++.+|||||||+|-++..++...+. +|+++|+++.|++.+++++...+.
T Consensus 114 eRLp~lD~fY~~i~~~i------~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~------ 181 (281)
T 3lcv_B 114 ERLPHLDEFYRELFRHL------PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV------ 181 (281)
T ss_dssp HHGGGHHHHHHHHGGGS------CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC------
T ss_pred HHhHhHHHHHHHHHhcc------CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC------
Confidence 34556666666655422 34779999999999999988765444 899999999999999999876543
Q ss_pred cceeEEEcCCCCCCCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 212 KATNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 212 ~~~~~~~~d~~~~~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
...+.+.|+..-+++ ++||+|++.-+++|+.++.....+ ++...|+|+|+++-.+.
T Consensus 182 -~~~~~v~D~~~~~p~-~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 182 -PHRTNVADLLEDRLD-EPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp -CEEEEECCTTTSCCC-SCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred -CceEEEeeecccCCC-CCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 477888888766544 789999999999999866655666 89999999999998776
No 227
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.37 E-value=3e-13 Score=118.34 Aligned_cols=108 Identities=18% Similarity=0.163 Sum_probs=79.0
Q ss_pred CCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCC--CCCCCCCCCcceeEEEcCCCCC-CCCCCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAP--ENHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~--~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD 232 (277)
.+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++.. .++ ...+++++.+|+.++ +..+++||
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~----~~~~v~~~~~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF----DDPRAEIVIANGAEYVRKFKNEFD 165 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG----GCTTEEEEESCHHHHGGGCSSCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc----CCCceEEEECcHHHHHhhCCCCce
Confidence 45799999999999999988663 34899999999999999998742 111 025689999987653 22346899
Q ss_pred EEecchhhhcCCh-h--hHHHHHHHHHhcCCCCcEEEEE
Q 023787 233 VIWVQWCIGHLTD-D--DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 233 ~Vi~~~~l~~~~~-~--d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+|++...-+.+.. . ....+++++.++|+|||++++.
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9998543221211 1 1258999999999999999996
No 228
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.37 E-value=3.8e-13 Score=116.27 Aligned_cols=105 Identities=15% Similarity=0.174 Sum_probs=88.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+++++..+++ ..++.++++|..++... +.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v-----~~~v~~~~~D~~~~~~~-~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFPGE-NIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCCCC-SCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEeCcHHHhccc-cCCCEEE
Confidence 46789999999999999999988777899999999999999999988776 45789999999888654 6899999
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
++... .-..++..+.++|||||++.+.+++.
T Consensus 198 ~~~p~------~~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 198 MGYVV------RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp ECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCCC------cHHHHHHHHHHHcCCCCEEEEEeeec
Confidence 77542 12257888889999999998876654
No 229
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.37 E-value=4.2e-12 Score=117.29 Aligned_cols=110 Identities=12% Similarity=0.071 Sum_probs=87.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CCCCc
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGR 230 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 230 (277)
..++.+|||+|||+|..+..++.... .+|+++|+|+.+++.+++++...++ .++.+.+.|+.+++ +++++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI------KIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCTTCCSSSSCSSC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC------CcEEEEEcChhhcchhhccCC
Confidence 45778999999999999999988653 3799999999999999999876543 46889999998876 44478
Q ss_pred eeEEec------chhhhcCChh-------hH-------HHHHHHHHhcCCCCcEEEEEec
Q 023787 231 YDVIWV------QWCIGHLTDD-------DF-------VSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 231 fD~Vi~------~~~l~~~~~~-------d~-------~~~l~~~~r~LkpGG~lii~e~ 270 (277)
||+|++ ..++++.++. +. ..+++++.++|||||++++++.
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999995 3345544421 11 5789999999999999998764
No 230
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.37 E-value=3.8e-13 Score=130.48 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=88.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEEe
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~Vi 235 (277)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++..+++. ..+++++++|+.++ +...++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~----~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT----GRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----STTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ccceEEEecCHHHHHHhcCCCccEEE
Confidence 56799999999999999988877778999999999999999998876651 14689999998764 23347899999
Q ss_pred cchhhh--------cCC-hhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 236 VQWCIG--------HLT-DDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 236 ~~~~l~--------~~~-~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+..... .+. ..+...++..+.++|+|||+|+++.+.
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 865321 011 236778999999999999999987664
No 231
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.36 E-value=1.7e-12 Score=112.94 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=78.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++.+. +|+++|+|+.|++.+++++...+. ..+++++++|+.+++++ +||+|
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~D~~~~~~~--~fD~v 97 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPV-----ASKLQVLVGDVLKTDLP--FFDTC 97 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEESCTTTSCCC--CCSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEEcceecccch--hhcEE
Confidence 45678999999999999999998865 699999999999999999875433 35799999999887654 79999
Q ss_pred ecchhhhcCChhhHHHHH--------------HHH--HhcCCCCcEEE
Q 023787 235 WVQWCIGHLTDDDFVSFF--------------KRA--KVGLKPGGFFV 266 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l--------------~~~--~r~LkpGG~li 266 (277)
+++..++..+ +-+..++ +++ +++|+|||.++
T Consensus 98 v~nlpy~~~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 98 VANLPYQISS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEECCGGGHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEecCcccch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 9976554322 1122222 223 36899999764
No 232
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.35 E-value=4.9e-13 Score=121.05 Aligned_cols=108 Identities=20% Similarity=0.140 Sum_probs=86.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC----CCCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD 232 (277)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++..+++ .+++++++|+.++.. ...+||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~------~~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGL------GNVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTC------TTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC------CCceEEECCHHHHHHHHHhcCCCee
Confidence 5679999999999999999877 55799999999999999999877654 348899999876532 146899
Q ss_pred EEecchhhhcCCh-------hhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~~-------~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+|++.......+. .....++.++.++|+|||+++++.+.
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9998643221111 35678999999999999999998764
No 233
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.34 E-value=1.3e-12 Score=106.70 Aligned_cols=99 Identities=23% Similarity=0.288 Sum_probs=72.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC----------CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEE-EcCCCCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF----------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF-CVPLQDF 224 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~----------~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~-~~d~~~~ 224 (277)
.++.+|||+|||+|.++..+++... .+|+++|+|+.+ . ..++.+. .+|+.+.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~--------~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P--------LEGATFLCPADVTDP 83 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C--------CTTCEEECSCCTTSH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c--------CCCCeEEEeccCCCH
Confidence 4678999999999999999998743 579999999731 0 1347778 7887654
Q ss_pred C--------CCCCceeEEecchhhhcC----Chhh-----HHHHHHHHHhcCCCCcEEEEEecC
Q 023787 225 T--------PETGRYDVIWVQWCIGHL----TDDD-----FVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 225 ~--------~~~~~fD~Vi~~~~l~~~----~~~d-----~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
. +++++||+|++..+++.. .+.. ...+++++.++|||||+|++....
T Consensus 84 ~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 84 RTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 3 233589999986654432 2110 147899999999999999998653
No 234
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.34 E-value=9.9e-13 Score=119.56 Aligned_cols=112 Identities=16% Similarity=0.105 Sum_probs=87.5
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC----CCCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD 232 (277)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++..+++. ..+++++++|+.++.. ...+||
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~----~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLD----LSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECCHHHHHHHHHhcCCCCC
Confidence 56799999999999999998877668999999999999999998765430 1268999999876532 136899
Q ss_pred EEecchhhhcCC-------hhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 233 VIWVQWCIGHLT-------DDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 233 ~Vi~~~~l~~~~-------~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+|++........ ......++.++.+.|+|||+++++.+..
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999875321110 1367789999999999999999986643
No 235
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.32 E-value=2e-12 Score=115.08 Aligned_cols=100 Identities=9% Similarity=0.045 Sum_probs=83.3
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++.. +. +..+|+++|+|+.+++.|++++..+++ ..++.++++|+.++. ++||+|++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l-----~~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKL-----EHKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECChHHhc---CCCcEEEE
Confidence 678999999999999998 75 566899999999999999999887654 346899999998876 68999998
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
..... ...++..+.++|+|||++++.++..
T Consensus 265 dpP~~------~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 265 NLPKF------AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CCTTT------GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CCcHh------HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 64321 1268999999999999999986643
No 236
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.32 E-value=3.3e-12 Score=115.23 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=83.5
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.++.+|||+|||+|.++..++..+.. +|+|+|+|+.|++.|++++...++ ..++++.++|+.+++.++++||+|
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl-----~~~i~~~~~D~~~~~~~~~~fD~I 290 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV-----LDKIKFIQGDATQLSQYVDSVDFA 290 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC-----GGGCEEEECCGGGGGGTCSCEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhhCCcccCCcCEE
Confidence 36689999999999999998877653 799999999999999999877654 357999999999988777899999
Q ss_pred ecchhhhcCC-----hhh-HHHHHHHHHhcCCCCcEEEEE
Q 023787 235 WVQWCIGHLT-----DDD-FVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 235 i~~~~l~~~~-----~~d-~~~~l~~~~r~LkpGG~lii~ 268 (277)
+++..+..-. -.+ ...+++++.++| +|+.++++
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~ 329 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT 329 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence 9987644321 112 367889999988 44444443
No 237
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.31 E-value=2e-12 Score=117.32 Aligned_cols=108 Identities=11% Similarity=-0.042 Sum_probs=82.2
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeEEe
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~Vi 235 (277)
++.+|||+|||+|.++..++..+.. |+++|+|+.+++.|++++..+++ . ..+.++|+.++. ...+.||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~-----~--~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGL-----R--VDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTC-----C--CEEEESCHHHHHHTCCCCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCC-----C--CcEEEccHHHHHHHhcCCCCEEE
Confidence 5789999999999999999887776 99999999999999999876654 1 345678876642 1124599999
Q ss_pred cchhhhcCC-------hhhHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 236 VQWCIGHLT-------DDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 236 ~~~~l~~~~-------~~d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
+......-. ..+...++..+.++|+|||++++..+..
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 865421111 1245689999999999999999776543
No 238
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.30 E-value=3.2e-12 Score=104.67 Aligned_cols=97 Identities=14% Similarity=-0.011 Sum_probs=72.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC--------
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-------- 227 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------- 227 (277)
.++.+|||+|||+|.++..+++. ..+|+|+|+++.. . ..++.++++|+.+....
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~---------~--------~~~v~~~~~D~~~~~~~~~~~~~~~ 85 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME---------E--------IAGVRFIRCDIFKETIFDDIDRALR 85 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC---------C--------CTTCEEEECCTTSSSHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc---------c--------CCCeEEEEccccCHHHHHHHHHHhh
Confidence 46789999999999999988876 4479999999631 1 24689999999886411
Q ss_pred ---CCceeEEecchhhhcCC---------hhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 228 ---TGRYDVIWVQWCIGHLT---------DDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 228 ---~~~fD~Vi~~~~l~~~~---------~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.++||+|++........ ......+++.+.++|||||.|++...
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 14899999865322111 11245789999999999999998643
No 239
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.29 E-value=1.1e-11 Score=115.15 Aligned_cols=108 Identities=14% Similarity=0.130 Sum_probs=84.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-CCCceeE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~fD~ 233 (277)
++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ .++.+++.|+.+++. .+++||.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~------~nv~~~~~D~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI------SNVALTHFDGRVFGAAVPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCCSTTHHHHSTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCCHHHhhhhccccCCE
Confidence 678999999999999999988743 3799999999999999999876543 368889999987653 3468999
Q ss_pred Eecc------hhhhcCCh-------hh-------HHHHHHHHHhcCCCCcEEEEEec
Q 023787 234 IWVQ------WCIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 234 Vi~~------~~l~~~~~-------~d-------~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|++. .++.+.++ ++ ...+|.++.++|||||+|+++..
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 9972 23333221 11 34689999999999999998753
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.28 E-value=5.7e-12 Score=112.40 Aligned_cols=106 Identities=13% Similarity=0.157 Sum_probs=84.3
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC------CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG 229 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~------~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 229 (277)
.++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.++...+. ++.+.++|..... ..+
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-------~~~i~~~D~l~~~-~~~ 200 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-------KMTLLHQDGLANL-LVD 200 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-------CCEEEESCTTSCC-CCC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-------CceEEECCCCCcc-ccC
Confidence 3568999999999999998887653 4799999999999999998754322 4678888876533 346
Q ss_pred ceeEEecchhhhcCChhhH----------------HHHHHHHHhcCCCCcEEEEEe
Q 023787 230 RYDVIWVQWCIGHLTDDDF----------------VSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~----------------~~~l~~~~r~LkpGG~lii~e 269 (277)
+||+|+++..+++++.++. ..++..+.+.|+|||++++.-
T Consensus 201 ~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 201 PVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999998877653332 258999999999999998875
No 241
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.28 E-value=1.8e-12 Score=113.74 Aligned_cols=104 Identities=10% Similarity=-0.026 Sum_probs=72.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeC----CHHHHHHHHHHhCCCCCCCCCCCcceeEEEc-CCCCCCCCCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP----VSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETG 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~----S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~ 229 (277)
..++.+|||+|||+|.++..+++. .+|+++|+ ++.+++.++ ... . ...++.++++ |+..++ +.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~--~----~~~~v~~~~~~D~~~l~--~~ 147 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MST--Y----GWNLVRLQSGVDVFFIP--PE 147 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCS--T----TGGGEEEECSCCTTTSC--CC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhh--c----CCCCeEEEeccccccCC--cC
Confidence 346789999999999999988866 46999999 565442110 011 0 0246888888 887764 46
Q ss_pred ceeEEecchhhh---cCChhh-HHHHHHHHHhcCCCCcEEEEEec
Q 023787 230 RYDVIWVQWCIG---HLTDDD-FVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 230 ~fD~Vi~~~~l~---~~~~~d-~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+||+|+|..+++ +..+.. ...+|..+.++|||||.|++...
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 899999977653 211111 12578999999999999998644
No 242
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.27 E-value=9.7e-12 Score=114.19 Aligned_cols=109 Identities=17% Similarity=0.045 Sum_probs=86.4
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CCCCce
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRY 231 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~f 231 (277)
..++.+|||+|||+|..+..++.... .+|+++|+|+.+++.+++++...+. ++.+++.|+.+++ +++++|
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-------~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-------KATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-------CCEEEECCTTCTHHHHTTCCE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-------CeEEEeCchhhchhhcccCCC
Confidence 45778999999999999999998765 3899999999999999999876543 3678899998875 445789
Q ss_pred eEEecc------hhhhcCChh-------h-------HHHHHHHHHhcCCCCcEEEEEec
Q 023787 232 DVIWVQ------WCIGHLTDD-------D-------FVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 232 D~Vi~~------~~l~~~~~~-------d-------~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|+|++. .++++.++. + ...+++++.+.|||||+++++..
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 999952 344444421 1 14789999999999999999763
No 243
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.24 E-value=2.7e-11 Score=110.99 Aligned_cols=99 Identities=21% Similarity=0.211 Sum_probs=78.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
++.+|||+|||+|.++..+++. ..+|+++|+|+.|++.|++++..+++ . ++|+++|+.++... +||+|++
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl------~-v~~~~~d~~~~~~~--~fD~Vv~ 359 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNV------D-AEFEVASDREVSVK--GFDTVIV 359 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC------C-EEEEECCTTTCCCT--TCSEEEE
T ss_pred CCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC------c-EEEEECChHHcCcc--CCCEEEE
Confidence 5679999999999999988866 44799999999999999999876543 3 88999999887533 8999999
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
......+. . .+++.+. .|+|||+++++-|
T Consensus 360 dPPr~g~~--~--~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 360 DPPRAGLH--P--RLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp CCCTTCSC--H--HHHHHHH-HHCCSEEEEEESC
T ss_pred cCCccchH--H--HHHHHHH-hcCCCcEEEEECC
Confidence 76543332 1 3555554 4899999999854
No 244
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.24 E-value=5.4e-12 Score=116.41 Aligned_cols=108 Identities=14% Similarity=0.068 Sum_probs=83.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCce
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~f 231 (277)
..++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ . +.+.+.|+.++. ..+++|
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~------~-v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA------P-LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC------C-CEEECSCHHHHHHHHCSCE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------e-EEEEECCHHHhhhhccccC
Confidence 45778999999999999999987754 3799999999999999999876554 3 788888877654 234789
Q ss_pred eEEecc------hhhhcCCh-------hh-------HHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQ------WCIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~------~~l~~~~~-------~d-------~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|++. .++..-++ ++ ...+++++.++|||||+|+++.
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999952 22332221 11 2679999999999999999874
No 245
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.20 E-value=4e-11 Score=110.23 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=79.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC----CCCCCc
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPETGR 230 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~ 230 (277)
..++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++..+++ .+++|+++|+.+. ++.+++
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~------~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGL------QNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCTTSCCSSSGGGTTC
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEECCHHHHhhhhhhhcCC
Confidence 346679999999999999988866 45799999999999999999876544 3799999999873 234568
Q ss_pred eeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 231 fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
||+|+++...... ..+++.+.+ ++|+++++++.+
T Consensus 357 fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvsc~ 390 (433)
T 1uwv_A 357 FDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVSCN 390 (433)
T ss_dssp CSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEESC
T ss_pred CCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEECC
Confidence 9999987654332 134554443 789999998754
No 246
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.19 E-value=7.4e-11 Score=100.19 Aligned_cols=75 Identities=23% Similarity=0.264 Sum_probs=61.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (277)
..++.+|||+|||+|.++..++..+ .+|+++|+|+.|++.+++++.. ..+++++++|+.++++++ ..| .
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~~-~ 97 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD--------HDNFQVLNKDILQFKFPKNQSY-K 97 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT--------CCSEEEECCCGGGCCCCSSCCC-E
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc--------CCCeEEEEChHHhCCcccCCCe-E
Confidence 4567899999999999999999887 4699999999999999999864 246899999999887663 456 4
Q ss_pred Eecchh
Q 023787 234 IWVQWC 239 (277)
Q Consensus 234 Vi~~~~ 239 (277)
|+++..
T Consensus 98 vv~nlP 103 (244)
T 1qam_A 98 IFGNIP 103 (244)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 555433
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.18 E-value=3.3e-11 Score=105.42 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=72.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||+|||+|.++..++..+ .+|+++|+|+.|++.+++++...+. .+++++++|+.+++++ +||+|
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~------~~v~~~~~D~~~~~~~--~~D~V 110 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGY------NNLEVYEGDAIKTVFP--KFDVC 110 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTC------CCEEC----CCSSCCC--CCSEE
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCC------CceEEEECchhhCCcc--cCCEE
Confidence 4467899999999999999888664 4799999999999999998754322 4688899999887653 79999
Q ss_pred ecchhhhcCChhhHHHHH---------------HHHHhcCCCCc
Q 023787 235 WVQWCIGHLTDDDFVSFF---------------KRAKVGLKPGG 263 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l---------------~~~~r~LkpGG 263 (277)
+++...+. ..+.+..++ ..+.|+++|+|
T Consensus 111 v~n~py~~-~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 111 TANIPYKI-SSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp EEECCGGG-HHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred EEcCCccc-ccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 99776553 333334444 34678888877
No 248
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.17 E-value=1.7e-11 Score=112.94 Aligned_cols=109 Identities=13% Similarity=0.021 Sum_probs=83.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCce
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~f 231 (277)
..++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++...++ .++.+.+.|..++. ..+++|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~------~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV------SNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC------SSEEEECCCHHHHHHHHTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEeCCHHHhhhhccccC
Confidence 45778999999999999999987633 3799999999999999999877654 35788888877654 224789
Q ss_pred eEEecch------hhhcCCh-------h-------hHHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQW------CIGHLTD-------D-------DFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~~------~l~~~~~-------~-------d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|++.. ++..-++ + ....++.++.++|||||+|+++.
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999642 2222111 0 12378999999999999999874
No 249
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.14 E-value=4.4e-11 Score=106.34 Aligned_cols=114 Identities=13% Similarity=0.086 Sum_probs=80.6
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCC--CCCCCCcceeEEEcCCCCCCC----CCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH--MAPDMHKATNFFCVPLQDFTP----ETG 229 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~----~~~ 229 (277)
+.+.+||+||||+|..+..+++....+|++||+++.+++.|++++...+. .......+++++.+|..++.. ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 46789999999999999999877667899999999999999999864211 000001368999999877542 246
Q ss_pred ceeEEecchhh---hcCCh-hhHHHHHHHH----HhcCCCCcEEEEEe
Q 023787 230 RYDVIWVQWCI---GHLTD-DDFVSFFKRA----KVGLKPGGFFVLKE 269 (277)
Q Consensus 230 ~fD~Vi~~~~l---~~~~~-~d~~~~l~~~----~r~LkpGG~lii~e 269 (277)
+||+|++...- ...+. ---..+++.+ .++|+|||++++.-
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 89999976532 11110 0113455555 99999999998863
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.14 E-value=1.3e-10 Score=101.18 Aligned_cols=78 Identities=13% Similarity=0.052 Sum_probs=67.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.+|||||||+|.++..+++.. .+|+++|+++.|++.+++++.. ..+++++++|+.++++++.+||.|
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~--------~~~v~vi~gD~l~~~~~~~~fD~I 118 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKEL--------YNNIEIIWGDALKVDLNKLDFNKV 118 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHH--------CSSEEEEESCTTTSCGGGSCCSEE
T ss_pred CCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhcc--------CCCeEEEECchhhCCcccCCccEE
Confidence 4567899999999999999999874 4799999999999999998863 357999999999988776789999
Q ss_pred ecchhhh
Q 023787 235 WVQWCIG 241 (277)
Q Consensus 235 i~~~~l~ 241 (277)
+++..++
T Consensus 119 v~NlPy~ 125 (295)
T 3gru_A 119 VANLPYQ 125 (295)
T ss_dssp EEECCGG
T ss_pred EEeCccc
Confidence 9886654
No 251
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.12 E-value=1.2e-10 Score=107.49 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=83.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC--------------CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY--------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~--------------~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d 220 (277)
+.++.+|||.|||+|.++..+++.. ...++|+|+++.+++.|+.++...+.. ..+..+.++|
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~----~~~~~i~~gD 244 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG----TDRSPIVCED 244 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC----SSCCSEEECC
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC----cCCCCEeeCC
Confidence 4466799999999999998877542 236999999999999999887544331 0156788888
Q ss_pred CCCCCCCCCceeEEecchhhhcCChhh---------------HHHHHHHHHhcCCCCcEEEEEe
Q 023787 221 LQDFTPETGRYDVIWVQWCIGHLTDDD---------------FVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 221 ~~~~~~~~~~fD~Vi~~~~l~~~~~~d---------------~~~~l~~~~r~LkpGG~lii~e 269 (277)
....+.. .+||+|+++..+.+....+ ...+++.+.+.|||||+++++-
T Consensus 245 ~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 245 SLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp TTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 8776544 4899999998776543211 2378999999999999998764
No 252
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.11 E-value=2.1e-12 Score=109.76 Aligned_cols=103 Identities=18% Similarity=0.159 Sum_probs=77.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (277)
..++.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.++++... ..+++++++|+.+++++. ++| .
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~f-~ 96 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL--------NTRVTLIHQDILQFQFPNKQRY-K 96 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT--------CSEEEECCSCCTTTTCCCSSEE-E
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc--------CCceEEEECChhhcCcccCCCc-E
Confidence 4467899999999999999999886 5799999999999998877652 357899999999987663 689 6
Q ss_pred EecchhhhcCChhhH----------HHHH----HHHHhcCCCCcEEEEE
Q 023787 234 IWVQWCIGHLTDDDF----------VSFF----KRAKVGLKPGGFFVLK 268 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~----------~~~l----~~~~r~LkpGG~lii~ 268 (277)
|+++...+ .+.... ..++ +.+.|+|+|||.+++.
T Consensus 97 vv~n~Py~-~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 97 IVGNIPYH-LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp EEEECCSS-SCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred EEEeCCcc-ccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 66653321 111111 1334 6699999999988764
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.08 E-value=1.3e-10 Score=106.10 Aligned_cols=97 Identities=18% Similarity=0.131 Sum_probs=74.5
Q ss_pred CCccEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
++.+|||+|||+|.++..++++. ..+++|+|+++.+++.| .+++++++|+.+.... ++||+|
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------~~~~~~~~D~~~~~~~-~~fD~I 102 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------PWAEGILADFLLWEPG-EAFDLI 102 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------TTEEEEESCGGGCCCS-SCEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------CCCcEEeCChhhcCcc-CCCCEE
Confidence 45699999999999999888763 34899999999998766 2478889998876543 689999
Q ss_pred ecchhhhc----------CChhh-----------------HHHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGH----------LTDDD-----------------FVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~----------~~~~d-----------------~~~~l~~~~r~LkpGG~lii~e 269 (277)
+++..+.. ++++. ...+++.+.++|+|||++++.-
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 99744322 22211 2267999999999999998874
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.08 E-value=7.4e-10 Score=100.03 Aligned_cols=109 Identities=13% Similarity=0.079 Sum_probs=86.1
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC---------------------------------------CcEEEEeCCHHHHHH
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~---------------------------------------~~v~gvD~S~~~l~~ 195 (277)
..++..+||.+||+|.++...+.... .+|+|+|+|+.|++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 45678999999999999887775432 249999999999999
Q ss_pred HHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecchhhhc-C-ChhhHHHHHHHHHhcCCC--CcEEEEEe
Q 023787 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH-L-TDDDFVSFFKRAKVGLKP--GGFFVLKE 269 (277)
Q Consensus 196 a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~~~l~~-~-~~~d~~~~l~~~~r~Lkp--GG~lii~e 269 (277)
|++++...++ ...+++.+.|+.+++.+ .+||+|+++..+.. + ..+++..+++.+.+.||+ ||.+++.-
T Consensus 272 Ar~Na~~~gl-----~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 272 ARKNAREVGL-----EDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHHTTC-----TTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHHcCC-----CCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 9999987665 34689999999998765 48999999966432 2 235677888888888877 88887763
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.08 E-value=3.3e-10 Score=102.68 Aligned_cols=109 Identities=13% Similarity=0.099 Sum_probs=83.5
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC---------------------------------------CcEEEEeCCHHHHHH
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~---------------------------------------~~v~gvD~S~~~l~~ 195 (277)
..++..|||.+||+|.++...+.... .+|+|+|+|+.|++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 45678999999999999887775432 249999999999999
Q ss_pred HHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecchhhhc-CC-hhhHHHHHHHHHhcCCC--CcEEEEEe
Q 023787 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH-LT-DDDFVSFFKRAKVGLKP--GGFFVLKE 269 (277)
Q Consensus 196 a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~~~l~~-~~-~~d~~~~l~~~~r~Lkp--GG~lii~e 269 (277)
|++++...++ ..++++.+.|+.+++.+ .+||+|+++..+.. +. .+++..+.+.+.+.||+ ||.+++.-
T Consensus 279 Ar~Na~~~gl-----~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 279 AKQNAVEAGL-----GDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHHTTC-----TTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHHcCC-----CCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999887665 34689999999988765 58999999966431 11 23566677777777766 88877753
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.07 E-value=3.9e-10 Score=101.97 Aligned_cols=109 Identities=17% Similarity=0.130 Sum_probs=85.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC---------------------------------------CcEEEEeCCHHHHHH
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~---------------------------------------~~v~gvD~S~~~l~~ 195 (277)
..++.+|||.+||+|.++..++.... .+|+|+|+++.|++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 45678999999999999988776532 259999999999999
Q ss_pred HHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecchhhhc-CC-hhhHHHHHHHHHhcCCC--CcEEEEEe
Q 023787 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH-LT-DDDFVSFFKRAKVGLKP--GGFFVLKE 269 (277)
Q Consensus 196 a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~~~l~~-~~-~~d~~~~l~~~~r~Lkp--GG~lii~e 269 (277)
|++++...++ ..+++|.+.|+.+++.+ .+||+|+++..+.. +. .+++..+.+++.+.||+ ||.+++..
T Consensus 273 Ar~Na~~~gl-----~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 273 ARENAEIAGV-----DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHHTC-----GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHHHcCC-----CCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 9999877655 34799999999988765 58999999877532 22 24567788888877776 88777753
No 257
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.05 E-value=3.9e-10 Score=97.94 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=68.8
Q ss_pred CCCCccEEEeec------cccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeE-EEcCCCCCC
Q 023787 155 NNQHLVALDCGS------GIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF-FCVPLQDFT 225 (277)
Q Consensus 155 ~~~~~~VLDiGc------GtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~ 225 (277)
..++.+|||+|| |+|. ..+++... .+|+|+|+|+. + .++++ +++|+.+++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v-----------~~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V-----------SDADSTLIGDCATVH 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B-----------CSSSEEEESCGGGCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C-----------CCCEEEEECccccCC
Confidence 557789999999 5576 33444443 37999999987 1 23778 999998876
Q ss_pred CCCCceeEEecchhhhc--------CC-hhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 226 PETGRYDVIWVQWCIGH--------LT-DDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~--------~~-~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++ ++||+|+++...+. .. ...+..+++++.++|||||+|++...
T Consensus 120 ~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 120 TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp CS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 55 68999998754221 11 11356899999999999999999654
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.02 E-value=1.2e-09 Score=94.11 Aligned_cols=99 Identities=15% Similarity=0.143 Sum_probs=73.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (277)
..++ +|||||||+|.++..+++.+. +|+++|+++.|++.+++++.. .+++++++|+.++++++ ..+|.
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~---------~~v~vi~~D~l~~~~~~~~~~~~ 113 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG---------LPVRLVFQDALLYPWEEVPQGSL 113 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT---------SSEEEEESCGGGSCGGGSCTTEE
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC---------CCEEEEECChhhCChhhccCccE
Confidence 4466 999999999999999998764 699999999999999999863 46899999998887653 26899
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
|+++...+ ++.+-+..++.. ..-+.+++++.
T Consensus 114 iv~NlPy~-iss~il~~ll~~---~~~~~~~lm~Q 144 (271)
T 3fut_A 114 LVANLPYH-IATPLVTRLLKT---GRFARLVFLVQ 144 (271)
T ss_dssp EEEEECSS-CCHHHHHHHHHH---CCEEEEEEEEE
T ss_pred EEecCccc-ccHHHHHHHhcC---CCCCEEEEEee
Confidence 98887654 443344445444 12235555554
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.99 E-value=9.1e-10 Score=94.04 Aligned_cols=76 Identities=13% Similarity=0.162 Sum_probs=63.0
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC----CCc
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGR 230 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~ 230 (277)
..++.+|||||||+|.++..+++.+ .+|+++|+++.|++.+++++.. ..+++++++|+.+++++ .++
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~~~ 97 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ--------QKNITIYQNDALQFDFSSVKTDKP 97 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT--------CTTEEEEESCTTTCCGGGSCCSSC
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh--------CCCcEEEEcchHhCCHHHhccCCC
Confidence 4567899999999999999998776 5799999999999999999865 35789999999998753 257
Q ss_pred eeEEecchhh
Q 023787 231 YDVIWVQWCI 240 (277)
Q Consensus 231 fD~Vi~~~~l 240 (277)
|| |+++...
T Consensus 98 ~~-vv~NlPY 106 (255)
T 3tqs_A 98 LR-VVGNLPY 106 (255)
T ss_dssp EE-EEEECCH
T ss_pred eE-EEecCCc
Confidence 88 6666554
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.97 E-value=2.5e-09 Score=93.90 Aligned_cols=108 Identities=10% Similarity=-0.039 Sum_probs=78.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC---C
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---G 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~ 229 (277)
..++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++...++ .++.+++.|+.++.... .
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~------~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV------SCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGGGSCTTCGGGT
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CeEEEEeCChHhcCccccccC
Confidence 4577899999999999999988763 24799999999999999999876554 46889999988765332 4
Q ss_pred ceeEEecc------hhhhcCCh---------hh-------HHHHHHHHHhcCCCCcEEEEEe
Q 023787 230 RYDVIWVQ------WCIGHLTD---------DD-------FVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 230 ~fD~Vi~~------~~l~~~~~---------~d-------~~~~l~~~~r~LkpGG~lii~e 269 (277)
+||.|++. .++..-++ ++ ...+|..+.++|+ ||+++.+.
T Consensus 174 ~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp TEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred CCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 79999962 22222111 11 1346888888887 99888763
No 261
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.96 E-value=2.2e-10 Score=98.08 Aligned_cols=107 Identities=17% Similarity=0.139 Sum_probs=75.7
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCH-------HHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--C
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS-------HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P 226 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~-------~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~ 226 (277)
.++.+|||+|||+|..+..++..+. +|+++|+|+ .+++.|+++...+++ ..+++++++|+.++. +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~-----~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDT-----AARINLHFGNAAEQMPAL 155 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHH-----HTTEEEEESCHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCC-----ccCeEEEECCHHHHHHhh
Confidence 4567999999999999999887755 699999999 999999887654322 234899999987752 2
Q ss_pred CC--CceeEEecchhhhcCC------------------hhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 227 ET--GRYDVIWVQWCIGHLT------------------DDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 227 ~~--~~fD~Vi~~~~l~~~~------------------~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++ ++||+|++...+.+.. +.+...++..+.++.+. .+++..+
T Consensus 156 ~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p 217 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRP 217 (258)
T ss_dssp HHHHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEE
T ss_pred hccCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcC
Confidence 33 5899999976554421 12345667777777643 5666544
No 262
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.95 E-value=4.2e-10 Score=101.69 Aligned_cols=102 Identities=15% Similarity=0.136 Sum_probs=80.8
Q ss_pred CCccEEEeeccccHHHHHHHHh--CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcc-eeEEEcCCCCCCC--CCCce
Q 023787 157 QHLVALDCGSGIGRITKNLLIR--YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-TNFFCVPLQDFTP--ETGRY 231 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~--~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~--~~~~f 231 (277)
++.+|||++||+|.++..++.+ +..+|+++|+++.+++.++++++.+++ ..+ ++++++|+.++.. ..++|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl-----~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI-----PEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC-----CCceEEEEeCCHHHHHHHhhCCCC
Confidence 5689999999999999998875 335899999999999999999988765 234 8889988755421 13579
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|++.. . . ....++..+.+.|+|||+++++-
T Consensus 127 D~V~lDP-~-g----~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDP-F-G----TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEECC-S-S----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECC-C-c----CHHHHHHHHHHHhCCCCEEEEEe
Confidence 9999876 1 1 12368889999999999888864
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.95 E-value=1.2e-09 Score=98.24 Aligned_cols=97 Identities=14% Similarity=0.076 Sum_probs=72.3
Q ss_pred CccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--CCC-------
Q 023787 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PET------- 228 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~------- 228 (277)
+.+|||+|||+|.++..++. ...+|+++|+|+.+++.|++++..+++ .+++|+++|+.++. ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~------~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHI------DNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTC------CSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEECCHHHHHHHHhhccccccc
Confidence 46899999999999997775 555799999999999999999876654 46899999886642 111
Q ss_pred -------CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 229 -------GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 229 -------~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.+||+|++...-.. +..++.+.|+++|.+++..
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr~g--------~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPRSG--------LDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp GGSCGGGCCEEEEEECCCTTC--------CCHHHHHHHTTSSEEEEEE
T ss_pred cccccccCCCCEEEECcCccc--------cHHHHHHHHhCCCEEEEEE
Confidence 37999997644221 2344555666888777764
No 264
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.95 E-value=3.5e-10 Score=102.03 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=78.4
Q ss_pred CCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCC---------------CCCCCCCCcceeEEEcC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPE---------------NHMAPDMHKATNFFCVP 220 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~---------------~~~~~~~~~~~~~~~~d 220 (277)
++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++..+ ++ .+++++++|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl------~~i~v~~~D 120 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE------KTIVINHDD 120 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS------SEEEEEESC
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC------CceEEEcCc
Confidence 45799999999999999999874 347999999999999999998765 32 238888998
Q ss_pred CCCCCC-CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 221 LQDFTP-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 221 ~~~~~~-~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+.++.. ..++||+|++.. .. ....++..+.+.|||||+++++
T Consensus 121 a~~~~~~~~~~fD~I~lDP-~~-----~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 121 ANRLMAERHRYFHFIDLDP-FG-----SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHHHHHHSTTCEEEEEECC-SS-----CCHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhccCCCCEEEeCC-CC-----CHHHHHHHHHHhcCCCCEEEEE
Confidence 866431 135799999543 21 1237889999999999998886
No 265
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.92 E-value=2e-09 Score=102.30 Aligned_cols=103 Identities=14% Similarity=0.091 Sum_probs=78.7
Q ss_pred CCccEEEeeccccHHHHHHHH---hCCC--cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCce
Q 023787 157 QHLVALDCGSGIGRITKNLLI---RYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~---~~~~--~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 231 (277)
....|||+|||+|.++...++ +... +|++||-|+ |...+++....+++ ..+++++.++++++..+ .++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~-----~dkVtVI~gd~eev~LP-EKV 429 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW-----GSQVTVVSSDMREWVAP-EKA 429 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT-----GGGEEEEESCTTTCCCS-SCE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC-----CCeEEEEeCcceeccCC-ccc
Confidence 446899999999988444433 3333 689999997 66778887777666 57899999999999877 699
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
|+|||-+.=..+-.+-....+....|.|||||+++
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99998764333333344578888899999999975
No 266
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.87 E-value=4.3e-09 Score=89.52 Aligned_cols=75 Identities=12% Similarity=0.143 Sum_probs=58.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC--Ccee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET--GRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~fD 232 (277)
..++.+|||||||+|.++..+++.+..+|+++|+++.|++.++++ . ..+++++++|+.++++++ +.|
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~---------~~~v~~i~~D~~~~~~~~~~~~~- 97 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G---------DERLEVINEDASKFPFCSLGKEL- 97 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C---------CTTEEEECSCTTTCCGGGSCSSE-
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c---------CCCeEEEEcchhhCChhHccCCc-
Confidence 446789999999999999999877546899999999999999877 2 256899999999987653 133
Q ss_pred EEecchhh
Q 023787 233 VIWVQWCI 240 (277)
Q Consensus 233 ~Vi~~~~l 240 (277)
.|+++...
T Consensus 98 ~vv~NlPy 105 (249)
T 3ftd_A 98 KVVGNLPY 105 (249)
T ss_dssp EEEEECCT
T ss_pred EEEEECch
Confidence 55555443
No 267
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.86 E-value=2.1e-09 Score=91.52 Aligned_cols=106 Identities=12% Similarity=-0.013 Sum_probs=68.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||+|||+|.++..++.. ....++++|++..+... .........++.++..++....+++++||+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~--------pi~~~~~g~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEK--------PMNVQSLGWNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCC--------CCCCCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccc--------ccccCcCCCCeEEEeccceehhcCCCCccE
Confidence 457789999999999999977654 33478899987433100 000000112445556665545566679999
Q ss_pred Eecchhhh----cCChhhHHHHHHHHHhcCCCC-cEEEEE
Q 023787 234 IWVQWCIG----HLTDDDFVSFFKRAKVGLKPG-GFFVLK 268 (277)
Q Consensus 234 Vi~~~~l~----~~~~~d~~~~l~~~~r~LkpG-G~lii~ 268 (277)
|+|..+.+ .........+++.+.++|+|| |.|++.
T Consensus 144 VlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 144 LLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 99987665 111111223578889999999 999985
No 268
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.85 E-value=1.1e-08 Score=88.60 Aligned_cols=113 Identities=18% Similarity=0.235 Sum_probs=82.1
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD 232 (277)
.+.+.+||-||.|.|..++.+++.. ..+|+.||+++.+++.+++.+..... +....++++.+..|...+. ...++||
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~-~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccc-cccCCCcEEEEechHHHHHhhccccCC
Confidence 3467899999999999999988653 34899999999999999998742100 0011467999999988774 3457999
Q ss_pred EEecchhhhcCChhh--HHHHHHHHHhcCCCCcEEEEE
Q 023787 233 VIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d--~~~~l~~~~r~LkpGG~lii~ 268 (277)
+|+.-..-..-+... -..+++.+++.|+|||+++..
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 999543211000000 137999999999999999985
No 269
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.80 E-value=2.4e-08 Score=89.70 Aligned_cols=105 Identities=13% Similarity=0.105 Sum_probs=74.0
Q ss_pred CccEEEeeccccHHHHHHHHh-----------------CCC-cEEEEeCC-----------HHHHHHHHHHhCCCCCCCC
Q 023787 158 HLVALDCGSGIGRITKNLLIR-----------------YFN-EVDLLEPV-----------SHFLDAARESLAPENHMAP 208 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~-----------------~~~-~v~gvD~S-----------~~~l~~a~~~~~~~~~~~~ 208 (277)
..+|+|+||++|..|..+... .+. +|...|+. +.+.+.+++....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 689999999999999987765 112 68888987 6666655443221
Q ss_pred CCCcceeEEEcCCCC---CCCCCCceeEEecchhhhcCChh-------------------------------------hH
Q 023787 209 DMHKATNFFCVPLQD---FTPETGRYDVIWVQWCIGHLTDD-------------------------------------DF 248 (277)
Q Consensus 209 ~~~~~~~~~~~d~~~---~~~~~~~fD~Vi~~~~l~~~~~~-------------------------------------d~ 248 (277)
..+.-|..+.... -.+++++||+|+++.+||++.+. |+
T Consensus 127 --~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~ 204 (384)
T 2efj_A 127 --KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDF 204 (384)
T ss_dssp --CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHH
Confidence 0123444443333 35778999999999999998522 23
Q ss_pred HHHHHHHHhcCCCCcEEEEEec
Q 023787 249 VSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 249 ~~~l~~~~r~LkpGG~lii~e~ 270 (277)
..+|+..++.|+|||++++.-.
T Consensus 205 ~~FL~~Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 205 TTFLRIHSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhccCCeEEEEEe
Confidence 3457888999999999999743
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.79 E-value=9.3e-09 Score=96.88 Aligned_cols=114 Identities=11% Similarity=-0.007 Sum_probs=81.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-------------------CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCccee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-------------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATN 215 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-------------------~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~ 215 (277)
+.++.+|||.+||+|.+...+++.. ...++|+|+++.+++.|+.++...+.... ......
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~-~~~~~~ 245 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGN-LDHGGA 245 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCB-GGGTBS
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCcc-ccccCC
Confidence 4567799999999999988776541 12699999999999999988765443110 001267
Q ss_pred EEEcCCCCCC-CCCCceeEEecchhhhcCCh------------hhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 216 FFCVPLQDFT-PETGRYDVIWVQWCIGHLTD------------DDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 216 ~~~~d~~~~~-~~~~~fD~Vi~~~~l~~~~~------------~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+.++|....+ ...++||+|+++..+..... ..-..++..+.+.|||||++.++-
T Consensus 246 I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 246 IRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp EEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 7888865533 23468999999877654321 112378999999999999998873
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.79 E-value=4.8e-08 Score=80.15 Aligned_cols=102 Identities=16% Similarity=0.039 Sum_probs=73.3
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC------------
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF------------ 224 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~------------ 224 (277)
+..+|||+||| ..|..+++....+|+.+|.+++..+.|++++...++. ...+++++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~---~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPA---EGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCC---TTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCCceEEEEeCchhhhcccccccchhh
Confidence 45799999985 6777666422358999999999999999999875430 024788999986542
Q ss_pred ---C--------C-CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 225 ---T--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 225 ---~--------~-~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
+ . ..++||+|+.-.-. ....+..+.+.|+|||++ +.||+
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~I-v~DNv 155 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITRPVTL-LFDDY 155 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSSCEEE-EETTG
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCCCeEE-EEeCC
Confidence 1 1 23689999987642 125566677999999998 55664
No 272
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.77 E-value=3.2e-08 Score=88.71 Aligned_cols=113 Identities=15% Similarity=0.157 Sum_probs=74.5
Q ss_pred CCccEEEeeccccHHHHHHHHh--------C-------CC-cEEEEeCCHHHHHHHHHHhCCCCCC------CCCCCcce
Q 023787 157 QHLVALDCGSGIGRITKNLLIR--------Y-------FN-EVDLLEPVSHFLDAARESLAPENHM------APDMHKAT 214 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~--------~-------~~-~v~gvD~S~~~l~~a~~~~~~~~~~------~~~~~~~~ 214 (277)
.+.+|+|+|||+|..|..++.. . +. +|..-|+........=+.+....-. ......+.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 4689999999999999876321 1 22 6788887766655444444331100 00000011
Q ss_pred eEEEc---CCCCCCCCCCceeEEecchhhhcCCh------------------------------------hhHHHHHHHH
Q 023787 215 NFFCV---PLQDFTPETGRYDVIWVQWCIGHLTD------------------------------------DDFVSFFKRA 255 (277)
Q Consensus 215 ~~~~~---d~~~~~~~~~~fD~Vi~~~~l~~~~~------------------------------------~d~~~~l~~~ 255 (277)
-|..+ .+-.-.+++++||+|+|+.+||++.+ .|+..+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 23332 33333477899999999999999861 2677789999
Q ss_pred HhcCCCCcEEEEEe
Q 023787 256 KVGLKPGGFFVLKE 269 (277)
Q Consensus 256 ~r~LkpGG~lii~e 269 (277)
++.|+|||+++++=
T Consensus 212 a~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 212 AAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEE
Confidence 99999999999973
No 273
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.77 E-value=2.6e-08 Score=96.64 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=80.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-------------------------------------------CCcEEEEeCCHH
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-------------------------------------------FNEVDLLEPVSH 191 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-------------------------------------------~~~v~gvD~S~~ 191 (277)
..++.+|||.+||+|.++...+... ...++|+|+++.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 4467899999999999988776542 126999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC--CCceeEEecchhhhc-C-ChhhHHHHHHHHH---hcCCCCcE
Q 023787 192 FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--TGRYDVIWVQWCIGH-L-TDDDFVSFFKRAK---VGLKPGGF 264 (277)
Q Consensus 192 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~fD~Vi~~~~l~~-~-~~~d~~~~l~~~~---r~LkpGG~ 264 (277)
|++.|++++...|+ ...++|.+.|+.++..+ .++||+|+++..+.. + ..+++..+.+.+. +.+.|||.
T Consensus 268 av~~A~~N~~~agv-----~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 268 VIQRARTNARLAGI-----GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHHTTC-----GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHcCC-----CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 99999999987766 45689999999887433 348999999966532 1 2234445555444 44568999
Q ss_pred EEEE
Q 023787 265 FVLK 268 (277)
Q Consensus 265 lii~ 268 (277)
+++.
T Consensus 343 ~~il 346 (703)
T 3v97_A 343 LSLF 346 (703)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8886
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.76 E-value=5.8e-09 Score=88.88 Aligned_cols=75 Identities=8% Similarity=0.059 Sum_probs=58.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCc--EEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC----
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---- 228 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~--v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---- 228 (277)
..++.+|||||||+|.++. +. ++ .+ |+++|+++.|++.+++++.. ..+++++++|+.++++++
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~ 87 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFL--------GPKLTIYQQDAMTFNFGELAEK 87 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTT--------GGGEEEECSCGGGCCHHHHHHH
T ss_pred CCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhcc--------CCceEEEECchhhCCHHHhhcc
Confidence 4467899999999999999 64 44 45 99999999999999988754 257999999998876432
Q ss_pred -CceeEEecchhh
Q 023787 229 -GRYDVIWVQWCI 240 (277)
Q Consensus 229 -~~fD~Vi~~~~l 240 (277)
+..|.|+++...
T Consensus 88 ~~~~~~vvsNlPY 100 (252)
T 1qyr_A 88 MGQPLRVFGNLPY 100 (252)
T ss_dssp HTSCEEEEEECCT
T ss_pred cCCceEEEECCCC
Confidence 234677777653
No 275
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.74 E-value=1.3e-08 Score=88.81 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=62.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--C---CC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P---ET 228 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~---~~ 228 (277)
..++.+|||+|||+|..+..+++..+ .+|+++|+|+.|++.|++++...+ .++.++++|+.+++ . ..
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-------~~v~~v~~d~~~l~~~l~~~g~ 96 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-------DRVSLFKVSYREADFLLKTLGI 96 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-------TTEEEEECCGGGHHHHHHHTTC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEECCHHHHHHHHHhcCC
Confidence 45678999999999999999998863 489999999999999999987632 46899999988764 1 11
Q ss_pred CceeEEecch
Q 023787 229 GRYDVIWVQW 238 (277)
Q Consensus 229 ~~fD~Vi~~~ 238 (277)
.+||.|++..
T Consensus 97 ~~~D~Vl~D~ 106 (301)
T 1m6y_A 97 EKVDGILMDL 106 (301)
T ss_dssp SCEEEEEEEC
T ss_pred CCCCEEEEcC
Confidence 5799999754
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.72 E-value=5.3e-09 Score=99.59 Aligned_cols=104 Identities=12% Similarity=0.063 Sum_probs=75.5
Q ss_pred CCccEEEeeccccHHHHHHHHh----C----------CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCC
Q 023787 157 QHLVALDCGSGIGRITKNLLIR----Y----------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~----~----------~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~ 222 (277)
....|||+|||+|.++...+.. + ..+|++||-|+.++..++.+.. +++ ..+++++.++++
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~-----~d~VtVI~gd~e 482 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW-----KRRVTIIESDMR 482 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT-----TTCSEEEESCGG
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC-----CCeEEEEeCchh
Confidence 3568999999999997533221 1 1289999999977766655543 343 456999999999
Q ss_pred CCCCC-----CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 223 DFTPE-----TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 223 ~~~~~-----~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
++..+ .+++|+|||-+.=..+..+-....|..+.+.|||||+++
T Consensus 483 ev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 483 SLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp GHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred hcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 98762 479999998776333333345568888899999999876
No 277
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.72 E-value=1.7e-08 Score=87.18 Aligned_cols=76 Identities=11% Similarity=0.079 Sum_probs=59.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCc---EEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCC--
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNE---VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-- 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~---v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-- 229 (277)
..++.+|||||||+|.++..++..+..+ |+++|+|+.|++.++++. . .+++++++|+.++++++-
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~---------~~v~~i~~D~~~~~~~~~~~ 109 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G---------ELLELHAGDALTFDFGSIAR 109 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G---------GGEEEEESCGGGCCGGGGSC
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C---------CCcEEEECChhcCChhHhcc
Confidence 4567899999999999999999775532 999999999999999984 2 468999999988875421
Q ss_pred ----ceeEEecchhh
Q 023787 230 ----RYDVIWVQWCI 240 (277)
Q Consensus 230 ----~fD~Vi~~~~l 240 (277)
..+.|+++...
T Consensus 110 ~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 110 PGDEPSLRIIGNLPY 124 (279)
T ss_dssp SSSSCCEEEEEECCH
T ss_pred cccCCceEEEEccCc
Confidence 23456665543
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.65 E-value=7.4e-09 Score=88.27 Aligned_cols=105 Identities=14% Similarity=0.011 Sum_probs=66.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||||||+|.++..++.. ....|+|+|++..+...+.. ......++.+...++....++..++|+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~--------~~~~g~~ii~~~~~~dv~~l~~~~~Dv 159 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM--------RTTLGWNLIRFKDKTDVFNMEVIPGDT 159 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--------CCBTTGGGEEEECSCCGGGSCCCCCSE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc--------cccCCCceEEeeCCcchhhcCCCCcCE
Confidence 457789999999999999977644 33479999998653221110 000122333334333323344578999
Q ss_pred EecchhhhcCCh-----hhHHHHHHHHHhcCCCC--cEEEEE
Q 023787 234 IWVQWCIGHLTD-----DDFVSFFKRAKVGLKPG--GFFVLK 268 (277)
Q Consensus 234 Vi~~~~l~~~~~-----~d~~~~l~~~~r~LkpG--G~lii~ 268 (277)
|+|..+.+ ... .....+|.-+.++|+|| |.|++.
T Consensus 160 VLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 160 LLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred EEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 99987765 221 11223577788999999 999986
No 279
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.64 E-value=7.7e-09 Score=93.75 Aligned_cols=75 Identities=19% Similarity=0.159 Sum_probs=60.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCC--CCCCCCCCcceeEEEcCCCCC-CC-CCCcee
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF-TP-ETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~--~~~~~~~~~~~~~~~~d~~~~-~~-~~~~fD 232 (277)
++.+|||+|||+|..+..++..+ .+|+++|+|+.|++.|++++... ++ .+++++++|+.++ +. ++++||
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl------~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEG------KDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTT------CEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCC------CcEEEEECcHHHhhhhccCCCce
Confidence 46899999999999999877554 47999999999999999998753 32 4699999999875 21 235899
Q ss_pred EEecch
Q 023787 233 VIWVQW 238 (277)
Q Consensus 233 ~Vi~~~ 238 (277)
+|++..
T Consensus 166 vV~lDP 171 (410)
T 3ll7_A 166 YIYVDP 171 (410)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999853
No 280
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.56 E-value=1.1e-07 Score=84.69 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=78.6
Q ss_pred CCCccEEEeeccccHHHHHHHHh------------C---CC--cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE
Q 023787 156 NQHLVALDCGSGIGRITKNLLIR------------Y---FN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~------------~---~~--~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 218 (277)
+...+|+|+||++|..|..+... + .. +|...|+.......+-+.+..... ..+.-|..
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~-----~~~~~f~~ 124 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND-----VDGVCFIN 124 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS-----CTTCEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc-----cCCCEEEE
Confidence 35689999999999877654433 1 22 789999998888888777654210 01223444
Q ss_pred c---CCCCCCCCCCceeEEecchhhhcCCh-------------------------------hhHHHHHHHHHhcCCCCcE
Q 023787 219 V---PLQDFTPETGRYDVIWVQWCIGHLTD-------------------------------DDFVSFFKRAKVGLKPGGF 264 (277)
Q Consensus 219 ~---d~~~~~~~~~~fD~Vi~~~~l~~~~~-------------------------------~d~~~~l~~~~r~LkpGG~ 264 (277)
+ .+-.-.++++++|+|+|+.++|++.+ .|+..+|+..++.|+|||+
T Consensus 125 gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~ 204 (359)
T 1m6e_X 125 GVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGR 204 (359)
T ss_dssp EEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCE
T ss_pred ecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 3 33334577899999999999999853 2567789999999999999
Q ss_pred EEEE
Q 023787 265 FVLK 268 (277)
Q Consensus 265 lii~ 268 (277)
+++.
T Consensus 205 mvl~ 208 (359)
T 1m6e_X 205 MVLT 208 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.56 E-value=8.7e-08 Score=85.54 Aligned_cols=114 Identities=11% Similarity=0.044 Sum_probs=80.1
Q ss_pred CCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCC--CCCCCCcceeEEEcCCCCCC----CCCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH--MAPDMHKATNFFCVPLQDFT----PETG 229 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~----~~~~ 229 (277)
.++.+||-||.|.|..++.+++....+|+.||+++.+++.+++.+..... .......+++.+..|...+. ...+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 35689999999999999999976666899999999999999998764211 11111245788888875442 1235
Q ss_pred ceeEEecchhh-------hcCCh-hhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 230 RYDVIWVQWCI-------GHLTD-DDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 230 ~fD~Vi~~~~l-------~~~~~-~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+||+|+.-..- ..... .--..+++.+++.|+|||+++..-
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 89999965321 11111 113578999999999999998753
No 282
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.56 E-value=2.3e-08 Score=85.37 Aligned_cols=83 Identities=18% Similarity=0.123 Sum_probs=59.0
Q ss_pred ccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCC--CCCCC-CCcceeEEEcCCCCC-CCCCCceeEE
Q 023787 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPEN--HMAPD-MHKATNFFCVPLQDF-TPETGRYDVI 234 (277)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~--~~~~~-~~~~~~~~~~d~~~~-~~~~~~fD~V 234 (277)
.+|||+|||+|..+..++..+. +|+++|+++.+.+.+++++.... ..... ...+++++++|..++ +....+||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 7999999999999999998876 59999999988666665543210 00000 024689999998764 2112479999
Q ss_pred ecchhhhc
Q 023787 235 WVQWCIGH 242 (277)
Q Consensus 235 i~~~~l~~ 242 (277)
++...+.+
T Consensus 169 ~lDP~y~~ 176 (258)
T 2oyr_A 169 YLDPMFPH 176 (258)
T ss_dssp EECCCCCC
T ss_pred EEcCCCCC
Confidence 99877655
No 283
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.55 E-value=9.7e-08 Score=89.91 Aligned_cols=105 Identities=11% Similarity=-0.128 Sum_probs=74.2
Q ss_pred ccEEEeeccccHHHHHHHHhC----------------CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCC
Q 023787 159 LVALDCGSGIGRITKNLLIRY----------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (277)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~----------------~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~ 222 (277)
.+|||.+||+|.+...++... ...++|+|+++.++..|+.++...++ ..++.+.++|..
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi-----~~~i~i~~gDtL 320 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI-----DFNFGKKNADSF 320 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC-----CCBCCSSSCCTT
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC-----Ccccceeccchh
Confidence 499999999999987765321 22699999999999999988755443 122333556654
Q ss_pred CCC-CCCCceeEEecchhhhc-------------------------CChh--hHHHHHHHHHhcCCCCcEEEEE
Q 023787 223 DFT-PETGRYDVIWVQWCIGH-------------------------LTDD--DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 223 ~~~-~~~~~fD~Vi~~~~l~~-------------------------~~~~--d~~~~l~~~~r~LkpGG~lii~ 268 (277)
..+ +...+||+|+++..+.. ++.. .--.+++.+.+.|+|||++.++
T Consensus 321 ~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiV 394 (544)
T 3khk_A 321 LDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALL 394 (544)
T ss_dssp TSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEE
Confidence 433 34578999999876543 1100 0125899999999999998776
No 284
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.47 E-value=8.4e-07 Score=83.40 Aligned_cols=108 Identities=16% Similarity=0.071 Sum_probs=79.9
Q ss_pred CCCccEEEeeccccHHHHHHHHhC----CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC--C-CCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY----FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--T-PET 228 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~----~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~-~~~ 228 (277)
.++.+|+|.+||+|.+...+++.. ...++|+|+++.++..|+.++...+.. ..+..+.++|.... + ...
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~----~~~~~I~~gDtL~~d~p~~~~ 295 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP----IENQFLHNADTLDEDWPTQEP 295 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCTTTSCSCCSSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC----cCccceEecceeccccccccc
Confidence 466799999999999988777663 237999999999999999886544331 13567888887654 3 345
Q ss_pred CceeEEecchhhhc-------------------CC---hhhHHHHHHHHHhcCC-CCcEEEEE
Q 023787 229 GRYDVIWVQWCIGH-------------------LT---DDDFVSFFKRAKVGLK-PGGFFVLK 268 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~-------------------~~---~~d~~~~l~~~~r~Lk-pGG~lii~ 268 (277)
.+||+|+++..+.. ++ ..+ -.++..+.+.|+ |||++.++
T Consensus 296 ~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~gGr~a~V 357 (542)
T 3lkd_A 296 TNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDNGVMAIV 357 (542)
T ss_dssp CCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTTCEEEEE
T ss_pred ccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCceeEEEE
Confidence 78999998854421 10 011 248999999999 99998776
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.47 E-value=2.7e-07 Score=79.14 Aligned_cols=105 Identities=12% Similarity=-0.056 Sum_probs=65.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+|||+||++|.++..+++. +...|+|+|++..+... +........++.....+..-..+..+++|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~--------P~~~~~~~~~iv~~~~~~di~~l~~~~~Dl 150 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEK--------PIHMQTLGWNIVKFKDKSNVFTMPTEPSDT 150 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCC--------CCCCCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccc--------cccccccCCceEEeecCceeeecCCCCcCE
Confidence 457899999999999999988754 34478999997532110 000000011233333332222344578999
Q ss_pred EecchhhhcCChh-----hHHHHHHHHHhcCCCC-cEEEEE
Q 023787 234 IWVQWCIGHLTDD-----DFVSFFKRAKVGLKPG-GFFVLK 268 (277)
Q Consensus 234 Vi~~~~l~~~~~~-----d~~~~l~~~~r~LkpG-G~lii~ 268 (277)
|+|..+.+ .... ....++.-+.++|+|| |.|++.
T Consensus 151 VlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 151 LLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp EEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred EeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 99876655 2211 1234577788999999 999986
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.44 E-value=6.5e-07 Score=86.67 Aligned_cols=110 Identities=12% Similarity=0.065 Sum_probs=74.8
Q ss_pred CCccEEEeeccccHHHHHHHHhCC----CcEEEEeCCHHHHHHH--HHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF----NEVDLLEPVSHFLDAA--RESLAPENHMAPDMHKATNFFCVPLQDFT-PETG 229 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~----~~v~gvD~S~~~l~~a--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~ 229 (277)
++.+|||.|||+|.+...++.... .+++|+|+++.+++.| +.++..+.+... .....+...|+.... ...+
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG--i~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS--NNAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT--TBCCEEECCCGGGCCGGGGT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC--CCcceEEecchhcccccccC
Confidence 567999999999999998887653 2799999999999999 555543222100 011244445554422 2346
Q ss_pred ceeEEecchhhhc-CC-hh-------------------------hHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGH-LT-DD-------------------------DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~-~~-~~-------------------------d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+||+|+++..+.. .. +. -...++..+.+.|+|||++.+.
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfI 464 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAI 464 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEE
Confidence 8999999876521 11 00 1335789999999999999886
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.36 E-value=2.4e-07 Score=78.98 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=70.7
Q ss_pred CCCccEEEeeccccHHHHHHHHh-------CC------CcEEEEeCCH---HHHH-----------HHHHHhCCCCCC--
Q 023787 156 NQHLVALDCGSGIGRITKNLLIR-------YF------NEVDLLEPVS---HFLD-----------AARESLAPENHM-- 206 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~-------~~------~~v~gvD~S~---~~l~-----------~a~~~~~~~~~~-- 206 (277)
.+..+|||+|+|+|..+..+++. .+ .+++++|..| +++. .|++.+......
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35679999999999998876653 33 2799999766 4444 455554321000
Q ss_pred ------CCCCCcceeEEEcCCCCC-C-CCC---CceeEEecc-hhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 207 ------APDMHKATNFFCVPLQDF-T-PET---GRYDVIWVQ-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 207 ------~~~~~~~~~~~~~d~~~~-~-~~~---~~fD~Vi~~-~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
......+++++.+|+.+. + .+. ..||+|+.- ++-...|+---..+|+.++++|+|||+|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 000124677888887663 2 111 279999974 232222210124799999999999999885
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.34 E-value=3.6e-07 Score=70.33 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=59.4
Q ss_pred CCccEEEeecccc-HHHHHHHH-hCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023787 157 QHLVALDCGSGIG-RITKNLLI-RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGtG-~~s~~l~~-~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (277)
++.+|||||||.| ..+..|++ .++ .|+++|+++..++ +++.|+.+..... ..||+
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~---------------------~v~dDiF~P~~~~Y~~~DL 92 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG---------------------IVRDDITSPRMEIYRGAAL 92 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT---------------------EECCCSSSCCHHHHTTEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc---------------------eEEccCCCCcccccCCcCE
Confidence 4579999999999 79998887 555 5999999864433 6778887743221 37999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
|++... +.+++..+.++++.. |.-++|.
T Consensus 93 IYsirP-----P~El~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 93 IYSIRP-----PAEIHSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp EEEESC-----CTTTHHHHHHHHHHH--TCEEEEE
T ss_pred EEEcCC-----CHHHHHHHHHHHHHc--CCCEEEE
Confidence 988765 346667777776643 4556655
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.29 E-value=7.2e-07 Score=76.94 Aligned_cols=106 Identities=9% Similarity=0.040 Sum_probs=76.4
Q ss_pred CCCccEEEeeccccHHHHHHHHhC------CCcEEEEeCCHH--------------------------HHHHHHHHhCCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSH--------------------------FLDAARESLAPE 203 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~------~~~v~gvD~S~~--------------------------~l~~a~~~~~~~ 203 (277)
..+.+|||+|+..|..+..++... ..+|+++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 356799999999999998775431 237999996421 467788888765
Q ss_pred CCCCCCCCcceeEEEcCCCCC-C-CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 204 NHMAPDMHKATNFFCVPLQDF-T-PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 204 ~~~~~~~~~~~~~~~~d~~~~-~-~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
++. ..+++++.+++.+. + .++++||+|+.-.-.. +.....|..+...|+|||++++-|
T Consensus 185 gl~----~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 DLL----DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp TCC----STTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCC----cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 541 25799999987653 2 3346899999765421 134578999999999999887754
No 290
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.28 E-value=2.7e-06 Score=75.82 Aligned_cols=115 Identities=14% Similarity=0.056 Sum_probs=82.7
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-CCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD 232 (277)
+.++.+|||+.||.|.=|..++..+.. .|+++|+|+.-++..++++...+........++.....|...++ ...+.||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 678899999999999999988876554 79999999999998888876543322222356777778876653 2346899
Q ss_pred EEe----cchh----hhc-------CChhh-------HHHHHHHHHhcCCCCcEEEEEe
Q 023787 233 VIW----VQWC----IGH-------LTDDD-------FVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 233 ~Vi----~~~~----l~~-------~~~~d-------~~~~l~~~~r~LkpGG~lii~e 269 (277)
.|+ |+.. +.. ....+ ...+|.++.+.|||||+|+.+.
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 999 3331 111 11111 2468889999999999999874
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.20 E-value=8e-06 Score=72.62 Aligned_cols=98 Identities=11% Similarity=0.006 Sum_probs=68.9
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..++.++||+||++|.+|..+++++. +|++||+.+ |-.... . ..+++++..|...+.++.++||+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~-l~~~l~----~--------~~~V~~~~~d~~~~~~~~~~~D~v 274 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP-MAQSLM----D--------TGQVTWLREDGFKFRPTRSNISWM 274 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC-CCHHHH----T--------TTCEEEECSCTTTCCCCSSCEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh-cChhhc----c--------CCCeEEEeCccccccCCCCCcCEE
Confidence 45789999999999999999988876 699999863 222111 1 356899999999888777899999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+|-.+.. +.....++......+..++.++...
T Consensus 275 vsDm~~~---p~~~~~l~~~wl~~~~~~~aI~~lK 306 (375)
T 4auk_A 275 VCDMVEK---PAKVAALMAQWLVNGWCRETIFNLK 306 (375)
T ss_dssp EECCSSC---HHHHHHHHHHHHHTTSCSEEEEEEE
T ss_pred EEcCCCC---hHHhHHHHHHHHhccccceEEEEEE
Confidence 9977653 2233344444444444456555443
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.08 E-value=4.5e-06 Score=70.14 Aligned_cols=103 Identities=12% Similarity=-0.019 Sum_probs=60.2
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCC-cceeEEEc-CCCCCCCCCCce
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCV-PLQDFTPETGRY 231 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~-~~~~~~~~-d~~~~~~~~~~f 231 (277)
..++.+|+|+||+.|.++...++.. ...|.|.++.... ........... .-+.|.++ |+.++. ..++
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~--------~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG--------HEEPMLMQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT--------SCCCCCCCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc--------ccCCCcccCCCceEEEeeccCCccCCC--CCCC
Confidence 5689999999999999999766531 2234566554220 00000000001 11244446 887643 3579
Q ss_pred eEEecchhhhcCC--hhh---HHHHHHHHHhcCCCCc-EEEEE
Q 023787 232 DVIWVQWCIGHLT--DDD---FVSFFKRAKVGLKPGG-FFVLK 268 (277)
Q Consensus 232 D~Vi~~~~l~~~~--~~d---~~~~l~~~~r~LkpGG-~lii~ 268 (277)
|+|+|-.+-. .+ .-| ...+|.-+.+.|+||| .|++.
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 9999865432 21 111 1126777779999999 88875
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.06 E-value=1.4e-05 Score=68.41 Aligned_cols=106 Identities=10% Similarity=-0.019 Sum_probs=66.8
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEc-CCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD 232 (277)
..++.+||||||++|.++..++.. +...|.|+|+...-.+ ..-+...-....+.|... |+..++. .++|
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-------~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D 162 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-------EPQLVQSYGWNIVTMKSGVDVFYRPS--ECCD 162 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-------CCCCCCBTTGGGEEEECSCCTTSSCC--CCCS
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-------CcchhhhcCCcceEEEeccCHhhCCC--CCCC
Confidence 457789999999999999966644 4448999998643110 000000000134677776 8766654 5699
Q ss_pred EEecchhhhcCChh--h---HHHHHHHHHhcCCCC-cEEEEEec
Q 023787 233 VIWVQWCIGHLTDD--D---FVSFFKRAKVGLKPG-GFFVLKEN 270 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~--d---~~~~l~~~~r~LkpG-G~lii~e~ 270 (277)
+|+|--. .--+.. + -..+|.-+.+.|++| |-|++.=.
T Consensus 163 ~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl 205 (321)
T 3lkz_A 163 TLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVL 205 (321)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred EEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEc
Confidence 9997665 322211 2 233677778899999 88888533
No 294
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.06 E-value=7.8e-06 Score=69.96 Aligned_cols=72 Identities=17% Similarity=0.058 Sum_probs=59.1
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CCCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PETG 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~ 229 (277)
..++..++|++||.|..+..++++ ..+|+|+|.++.+++.|++ +.. .++.++++++.++. ...+
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~---------~rv~lv~~~f~~l~~~L~~~g~~ 88 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL---------PGLTVVQGNFRHLKRHLAALGVE 88 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC---------TTEEEEESCGGGHHHHHHHTTCS
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc---------CCEEEEECCcchHHHHHHHcCCC
Confidence 456789999999999999999987 3479999999999999998 654 36889999988763 2225
Q ss_pred ceeEEecc
Q 023787 230 RYDVIWVQ 237 (277)
Q Consensus 230 ~fD~Vi~~ 237 (277)
+||.|++.
T Consensus 89 ~vDgIL~D 96 (285)
T 1wg8_A 89 RVDGILAD 96 (285)
T ss_dssp CEEEEEEE
T ss_pred CcCEEEeC
Confidence 79999853
No 295
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.93 E-value=1.1e-06 Score=95.50 Aligned_cols=104 Identities=15% Similarity=0.147 Sum_probs=56.5
Q ss_pred CCCccEEEeeccccHHHHHHHHhC------CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPET 228 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~------~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~ 228 (277)
.+..+|||||.|+|..+..++... +.+++..|+|+.+.+.|++++.. ..++....|..+. ++..
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---------~di~~~~~d~~~~~~~~~ 1309 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---------LHVTQGQWDPANPAPGSL 1309 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---------HTEEEECCCSSCCCC---
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---------cccccccccccccccCCC
Confidence 356899999999998777666542 22799999999888888777643 1122222233331 2234
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
++||+|++..++|..+ ++...+.+++++|||||++++.|.
T Consensus 1310 ~~ydlvia~~vl~~t~--~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1310 GKADLLVCNCALATLG--DPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp --CCEEEEECC----------------------CCEEEEEEC
T ss_pred CceeEEEEcccccccc--cHHHHHHHHHHhcCCCcEEEEEec
Confidence 6899999999998766 667899999999999999999874
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.86 E-value=0.00011 Score=60.97 Aligned_cols=107 Identities=13% Similarity=0.008 Sum_probs=67.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEc-CCCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD 232 (277)
..++.+|||+||++|.++..++.. +..+|.++|+-..-.+ ...+....-...+.|..+ |+..++. .++|
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe-------~P~~~~s~gwn~v~fk~gvDv~~~~~--~~~D 146 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE-------EPVPMSTYGWNIVKLMSGKDVFYLPP--EKCD 146 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC-------CCCCCCCTTTTSEEEECSCCGGGCCC--CCCS
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc-------CcchhhhcCcCceEEEeccceeecCC--cccc
Confidence 457789999999999999966654 3448999998643211 000000000246888888 8765543 5799
Q ss_pred EEecchhhhcCC-hhh---HHHHHHHHHhcCCCCcEEEEEecC
Q 023787 233 VIWVQWCIGHLT-DDD---FVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 233 ~Vi~~~~l~~~~-~~d---~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
.|+|-..=..-. ..| -..+|.-+.+.|++ |-|++.=.+
T Consensus 147 tllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 147 TLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred EEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 999865432211 112 23367777899999 788875333
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.78 E-value=0.00011 Score=69.01 Aligned_cols=108 Identities=17% Similarity=0.046 Sum_probs=72.6
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC--------------CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY--------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~--------------~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d 220 (277)
+.++.+|+|-.||+|.+.....+.. ...++|+|+++.+...|+-++--.+. ....+...|
T Consensus 215 p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~------~~~~I~~~d 288 (530)
T 3ufb_A 215 PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL------EYPRIDPEN 288 (530)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC------SCCEEECSC
T ss_pred cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC------ccccccccc
Confidence 5567799999999999987665431 12599999999999999877543322 123455565
Q ss_pred CCCCC----CCCCceeEEecchhhhcCCh--------------hhHHHHHHHHHhcCC-------CCcEEEEE
Q 023787 221 LQDFT----PETGRYDVIWVQWCIGHLTD--------------DDFVSFFKRAKVGLK-------PGGFFVLK 268 (277)
Q Consensus 221 ~~~~~----~~~~~fD~Vi~~~~l~~~~~--------------~d~~~~l~~~~r~Lk-------pGG~lii~ 268 (277)
....+ .+..+||+|+++..+..-.+ +.-..+++.+.+.|| |||++.++
T Consensus 289 tL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avV 361 (530)
T 3ufb_A 289 SLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVV 361 (530)
T ss_dssp TTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEE
T ss_pred cccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEE
Confidence 54433 12357999999877632110 112357788888886 79998876
No 298
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.62 E-value=0.00021 Score=62.99 Aligned_cols=115 Identities=9% Similarity=0.074 Sum_probs=83.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCC-----C----CC------CCCcceeEEEcC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENH-----M----AP------DMHKATNFFCVP 220 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~-----~----~~------~~~~~~~~~~~d 220 (277)
+...|+.+|||.......+...+.. .++-||. |.+++.-++.+...+. . .. ....+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4578999999999988888765443 5666676 7787777666544210 0 00 002467788889
Q ss_pred CCCCC--------C-CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 221 LQDFT--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 221 ~~~~~--------~-~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
+.+.. . ......++++-.+++|++.+....+++.+.+.. |+|.+++.|.+.+
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 88732 1 235678999999999999999999999999887 8888887787655
No 299
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.60 E-value=0.00023 Score=63.85 Aligned_cols=102 Identities=20% Similarity=0.168 Sum_probs=72.2
Q ss_pred ccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC--------CCCc
Q 023787 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--------ETGR 230 (277)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~ 230 (277)
.+++|+-||.|.++..+...++..+.++|+++..++..+.++.. ..+++.|+.++.. ....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~-----------~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPR-----------SLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTT-----------SEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCC-----------CceEecChhhcCHHHHHhhcccCCC
Confidence 57999999999999999988988888999999999999988643 4567778777631 2357
Q ss_pred eeEEecchhhhcCC-------hhhHHHH---HHHHHhcCCCCcEEEEEecCCC
Q 023787 231 YDVIWVQWCIGHLT-------DDDFVSF---FKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 231 fD~Vi~~~~l~~~~-------~~d~~~~---l~~~~r~LkpGG~lii~e~~~~ 273 (277)
+|+|+.......++ ++....+ +-++...++| .+++.||++.
T Consensus 72 ~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P--~~~v~ENV~g 122 (376)
T 3g7u_A 72 IDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP--LFFLAENVPG 122 (376)
T ss_dssp CCEEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCC--SEEEEEECTT
T ss_pred eeEEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCC--CEEEEecchH
Confidence 99999655433222 1111122 3344455678 5777899864
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.58 E-value=0.00011 Score=63.72 Aligned_cols=58 Identities=19% Similarity=0.020 Sum_probs=45.4
Q ss_pred HHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCC
Q 023787 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP 202 (277)
Q Consensus 139 ~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~ 202 (277)
..++..++... ..++..|||++||+|..+..++..+. +++|+|+++.+++.|++++..
T Consensus 222 ~~l~~~~i~~~-----~~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 222 LELAERLVRMF-----SFVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHHHH-----CCTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHH
Confidence 44555555432 24678999999999999998776554 699999999999999998754
No 301
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.27 E-value=0.00024 Score=62.90 Aligned_cols=103 Identities=19% Similarity=0.219 Sum_probs=67.8
Q ss_pred CccEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC---CCcee
Q 023787 158 HLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRYD 232 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD 232 (277)
..+|+|+-||.|.++..+...+ +..|.++|+++.+++..+.++.. ..+++.|+.++... ...+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-----------~~~~~~Di~~~~~~~~~~~~~D 70 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-----------TQLLAKTIEGITLEEFDRLSFD 70 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------SCEECSCGGGCCHHHHHHHCCS
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-----------cccccCCHHHccHhHcCcCCcC
Confidence 3589999999999999998888 44799999999999999999754 34567787776421 12589
Q ss_pred EEecchhhhcCCh-------hh-HHHHHH---HHHhcCC--CCcEEEEEecCCC
Q 023787 233 VIWVQWCIGHLTD-------DD-FVSFFK---RAKVGLK--PGGFFVLKENIAR 273 (277)
Q Consensus 233 ~Vi~~~~l~~~~~-------~d-~~~~l~---~~~r~Lk--pGG~lii~e~~~~ 273 (277)
+|+.......++. +| ...++. ++.+.++ |. +++.||+..
T Consensus 71 ~l~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~ 122 (343)
T 1g55_A 71 MILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKG 122 (343)
T ss_dssp EEEECCC------------------CHHHHHHHHGGGCSSCCS--EEEEEEETT
T ss_pred EEEEcCCCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCcc
Confidence 9997655333221 11 112333 3444455 54 566688864
No 302
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.04 E-value=0.0005 Score=58.83 Aligned_cols=101 Identities=11% Similarity=-0.029 Sum_probs=76.6
Q ss_pred CccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC----CCCCCceeE
Q 023787 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPETGRYDV 233 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~ 233 (277)
+..+||+=+|+|.++..+++. ..+++.+|.++..++..++++.. ..++.++..|.... ..+..+||+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~--------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF--------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT--------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred CCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc--------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 457899999999999999874 47899999999999999998865 35688888885332 133357999
Q ss_pred EecchhhhcCChhhHHHHHHHHHh--cCCCCcEEEEEe
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r--~LkpGG~lii~e 269 (277)
|++--....-. +...++..+.+ .+.|+|++++=-
T Consensus 163 VfiDPPYe~k~--~~~~vl~~L~~~~~r~~~Gi~v~WY 198 (283)
T 2oo3_A 163 IFIDPSYERKE--EYKEIPYAIKNAYSKFSTGLYCVWY 198 (283)
T ss_dssp EEECCCCCSTT--HHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred EEECCCCCCCc--HHHHHHHHHHHhCccCCCeEEEEEE
Confidence 99988765422 56666666665 457899988743
No 303
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.98 E-value=0.0019 Score=56.73 Aligned_cols=100 Identities=15% Similarity=0.052 Sum_probs=68.7
Q ss_pred CccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC-CCceeEEec
Q 023787 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIWV 236 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~fD~Vi~ 236 (277)
+.+++|+.||.|.++..+...++..+.++|+++..++..+.++... . +.|+.++... -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~--------~-----~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK--------P-----EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC--------C-----BSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC--------C-----cCCHHHcCHhhCCCCCEEEE
Confidence 4789999999999999999888888999999999999999998652 1 4565554311 125899996
Q ss_pred chhhhcCC---------hh--hHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 237 QWCIGHLT---------DD--DFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 237 ~~~l~~~~---------~~--d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
......++ ++ .+-.-+-++.+.++|. +++.||++
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~ 122 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVK 122 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEG
T ss_pred CCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcH
Confidence 54333221 11 1222233344556884 77889975
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.95 E-value=0.0015 Score=55.42 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=45.7
Q ss_pred HHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCC
Q 023787 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE 203 (277)
Q Consensus 139 ~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~ 203 (277)
..++..++... ..++..|||..||+|..+......+ .+++|+|+++.+++.+++++...
T Consensus 199 ~~l~~~~i~~~-----~~~~~~vlD~f~GsGtt~~~a~~~g-r~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 199 RDLIERIIRAS-----SNPNDLVLDCFMGSGTTAIVAKKLG-RNFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp HHHHHHHHHHH-----CCTTCEEEESSCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhc
Confidence 45555555432 2467899999999999999766544 57999999999999999998653
No 305
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.93 E-value=0.0016 Score=57.69 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=49.3
Q ss_pred CCccEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 224 (277)
++..|||||.|.|.+|..|++.. +.+|+++|+.+.++...++.+ . ..+++++.+|+.++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--------GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--------TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--------CCCEEEEECCccch
Confidence 35789999999999999999763 557999999999999999877 2 24688888888554
No 306
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.84 E-value=0.0018 Score=56.70 Aligned_cols=73 Identities=12% Similarity=0.188 Sum_probs=56.4
Q ss_pred CCCCccEEEeeccccHHHHHHHHhC-CC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRY-FN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
..++..++|..||.|..+..+++.. +. +|+|+|.++.+++.++ ++. ..++.++..++.++. ..
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~---------~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID---------DPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC---------CTTEEEEESCGGGHHHHHHHTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc---------CCcEEEEeCCHHHHHHHHHhcC
Confidence 4678899999999999999999774 32 8999999999999984 442 256888988887763 11
Q ss_pred -CCceeEEecc
Q 023787 228 -TGRYDVIWVQ 237 (277)
Q Consensus 228 -~~~fD~Vi~~ 237 (277)
.+++|.|+..
T Consensus 125 ~~~~vDgILfD 135 (347)
T 3tka_A 125 LIGKIDGILLD 135 (347)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCcccEEEEC
Confidence 1368998843
No 307
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.78 E-value=0.0095 Score=51.81 Aligned_cols=105 Identities=10% Similarity=-0.036 Sum_probs=75.7
Q ss_pred ccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC---------CCCC
Q 023787 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---------PETG 229 (277)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---------~~~~ 229 (277)
..|++||||-=.....+.......|+-|| -|.+++..++.+...+. ....+..++.+|+.+ . +...
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~---~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGV---TPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTC---CCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCC---CCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 46999999976554433311112688889 49999999888863221 013567788889876 3 1223
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.-=++++-.+++|+++++...+++.+...+.||+.+++.
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d 217 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVE 217 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 455777888999999999999999999999999988775
No 308
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.71 E-value=0.0032 Score=55.28 Aligned_cols=105 Identities=11% Similarity=0.009 Sum_probs=71.7
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcE-EEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC---CCCc
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEV-DLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGR 230 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v-~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~ 230 (277)
...+++|+-||.|.++..+...++ ..+ .++|+++..++..+.++... +++.|+.++.. +...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------------~~~~DI~~~~~~~i~~~~ 76 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------------VQVKNLDSISIKQIESLN 76 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------------CBCCCTTTCCHHHHHHTC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------------cccCChhhcCHHHhccCC
Confidence 457999999999999999888775 556 79999999999999998651 34567777642 1236
Q ss_pred eeEEecchhhhcC---------C-hhhHHHHHHHHHh-cCCC---CcEEEEEecCCC
Q 023787 231 YDVIWVQWCIGHL---------T-DDDFVSFFKRAKV-GLKP---GGFFVLKENIAR 273 (277)
Q Consensus 231 fD~Vi~~~~l~~~---------~-~~d~~~~l~~~~r-~Lkp---GG~lii~e~~~~ 273 (277)
+|+++.......+ . ++....++.++.+ +++. --.+++.||+..
T Consensus 77 ~Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~g 133 (327)
T 3qv2_A 77 CNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPL 133 (327)
T ss_dssp CCEEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGG
T ss_pred CCEEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhh
Confidence 8999965443333 1 1122245556666 4432 246888899853
No 309
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.64 E-value=0.0022 Score=54.93 Aligned_cols=93 Identities=14% Similarity=0.090 Sum_probs=60.0
Q ss_pred CCCCccEEEeec------cccHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC
Q 023787 155 NNQHLVALDCGS------GIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP 226 (277)
Q Consensus 155 ~~~~~~VLDiGc------GtG~~s~~l~~~~~~--~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 226 (277)
.+.+.+|||+|+ -+|... +.+.++. .|+++|+.+-.. ... .++++|......
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~s-----------------da~-~~IqGD~~~~~~ 166 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFVS-----------------DAD-STLIGDCATVHT 166 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCBC-----------------SSS-EEEESCGGGEEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCccccc-----------------CCC-eEEEcccccccc
Confidence 567899999996 677742 2233443 799999864210 111 448888765433
Q ss_pred CCCceeEEecchhh---hcCChh------hHHHHHHHHHhcCCCCcEEEEE
Q 023787 227 ETGRYDVIWVQWCI---GHLTDD------DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l---~~~~~~------d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.++||+|+|-.+- .+...+ =.+.++.-+.+.|+|||.|++.
T Consensus 167 -~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 167 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp -SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 3789999965432 121111 1456777788899999999986
No 310
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.45 E-value=0.013 Score=50.62 Aligned_cols=108 Identities=16% Similarity=0.069 Sum_probs=72.3
Q ss_pred CCCCccEEEeeccccHHHHHHHHhCCCc--EEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC----C
Q 023787 155 NNQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----T 228 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~--v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~ 228 (277)
.....+++|+=||.|.++..+...++.- |.++|+++...+.-+.++.. ..++..|+.++... .
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~-----------~~~~~~DI~~i~~~~i~~~ 81 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQG-----------KIMYVGDVRSVTQKHIQEW 81 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTT-----------CEEEECCGGGCCHHHHHHT
T ss_pred cCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCC-----------CceeCCChHHccHHHhccc
Confidence 4466799999999999999988888874 69999999999888887643 34567788776421 1
Q ss_pred CceeEEecchhhhc----------CChh--hHHHHHHHHHhcCCCC-cE----EEEEecCCC
Q 023787 229 GRYDVIWVQWCIGH----------LTDD--DFVSFFKRAKVGLKPG-GF----FVLKENIAR 273 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~----------~~~~--d~~~~l~~~~r~LkpG-G~----lii~e~~~~ 273 (277)
+.+|+++....... +.++ .+-.-+.++.+.++|. |. +++.||++.
T Consensus 82 ~~~Dll~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~ENV~g 143 (295)
T 2qrv_A 82 GPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVA 143 (295)
T ss_dssp CCCSEEEECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEEESS
T ss_pred CCcCEEEecCCCccccccCccccccccccchhHHHHHHHHHHhCcccccCCccEEEEEcCcc
Confidence 36899985432111 1111 1222233444556776 32 778899864
No 311
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.42 E-value=0.0048 Score=54.28 Aligned_cols=102 Identities=20% Similarity=0.145 Sum_probs=67.9
Q ss_pred ccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC---CCCceeE
Q 023787 159 LVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGRYDV 233 (277)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~ 233 (277)
.+++|+-||.|.++..+...++ .-|.++|+++...+.-+.++.. ..++..|+.++.. +...+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~-----------~~~~~~DI~~~~~~~~~~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE-----------TNLLNRNIQQLTPQVIKKWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------SCEECCCGGGCCHHHHHHTTCCE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC-----------CceeccccccCCHHHhccCCCCE
Confidence 5899999999999999888886 4688999999999999998754 2345667766542 1236899
Q ss_pred EecchhhhcCC--------hhhHHHHHHH---HHhcCC-CCcEEEEEecCCC
Q 023787 234 IWVQWCIGHLT--------DDDFVSFFKR---AKVGLK-PGGFFVLKENIAR 273 (277)
Q Consensus 234 Vi~~~~l~~~~--------~~d~~~~l~~---~~r~Lk-pGG~lii~e~~~~ 273 (277)
++.......++ ++....++.+ +.+.++ | .+++.||++.
T Consensus 73 l~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~g 122 (333)
T 4h0n_A 73 ILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKG 122 (333)
T ss_dssp EEECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTT
T ss_pred EEecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchh
Confidence 98544322221 0111123333 334444 6 6788899864
No 312
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.33 E-value=0.012 Score=51.25 Aligned_cols=100 Identities=15% Similarity=0.077 Sum_probs=69.6
Q ss_pred ccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC-CCceeEEecc
Q 023787 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIWVQ 237 (277)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~fD~Vi~~ 237 (277)
++|+|+=||.|.++..+-..++.-+.++|+++.+.+.-+.++.. .++..|+.++... -..+|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~------------~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSA------------KLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCS------------EEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCC------------CcccCChhhCCHhhCCcccEEEec
Confidence 37999999999999998888888889999999999998888643 3567788776422 2368999855
Q ss_pred hhhhcC---------Chh--hHHHHHHHHHhcCCCCcEEEEEecCC
Q 023787 238 WCIGHL---------TDD--DFVSFFKRAKVGLKPGGFFVLKENIA 272 (277)
Q Consensus 238 ~~l~~~---------~~~--d~~~~l~~~~r~LkpGG~lii~e~~~ 272 (277)
.....+ .++ .+-.-+-++.+.++|. +++.||++
T Consensus 69 pPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~ 112 (331)
T 3ubt_Y 69 PPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVK 112 (331)
T ss_dssp CCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECC
T ss_pred CCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeec
Confidence 432222 111 1222233455567884 77789985
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.15 E-value=0.022 Score=50.51 Aligned_cols=96 Identities=14% Similarity=-0.004 Sum_probs=64.7
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-----CCC
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----TPE 227 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~ 227 (277)
..++.+||-+|||. |..+..+++.. ..+|+++|.++.-++.+++.-.. ..+...-.++ ...
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT------------HVINSKTQDPVAAIKEIT 255 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCC------------EEecCCccCHHHHHHHhc
Confidence 56788999999986 88888887754 43699999999999999765322 1111111111 011
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.+.||+|+-.-.- ...++.+.+.|+|||++++.-.
T Consensus 256 ~gg~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 256 DGGVNFALESTGS--------PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp TSCEEEEEECSCC--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEeCC
Confidence 2379999854331 1467888999999999988643
No 314
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.14 E-value=0.018 Score=46.11 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=59.9
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||..|+ |.|..+..++.....+|+++|.+++.++.+++. .. . .. .|..+..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~-g~--------~---~~--~d~~~~~~~~~~~~ 101 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL-GV--------E---YV--GDSRSVDFADEILE 101 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT-CC--------S---EE--EETTCSTHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CC--------C---EE--eeCCcHHHHHHHHH
Confidence 457789999994 567777666654334699999999888777542 11 0 01 1222111
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...+.+|+|+.+-. . ..+..+.+.|+|||++++.-
T Consensus 102 ~~~~~~~D~vi~~~g----~-----~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 102 LTDGYGVDVVLNSLA----G-----EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp HTTTCCEEEEEECCC----T-----HHHHHHHHTEEEEEEEEECS
T ss_pred HhCCCCCeEEEECCc----h-----HHHHHHHHHhccCCEEEEEc
Confidence 11236999986542 1 46788889999999998864
No 315
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.04 E-value=0.073 Score=44.85 Aligned_cols=106 Identities=10% Similarity=0.105 Sum_probs=67.9
Q ss_pred CCccEEEeeccccHHHHHHHHh-------CC-CcEEEEe-----CCHH----------------------HHHHH---HH
Q 023787 157 QHLVALDCGSGIGRITKNLLIR-------YF-NEVDLLE-----PVSH----------------------FLDAA---RE 198 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~-------~~-~~v~gvD-----~S~~----------------------~l~~a---~~ 198 (277)
-+..|+|+||-.|..+..++.. +. .+|+++| +.+. .++.. .+
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 4678999999999988876542 12 3899999 3211 11111 11
Q ss_pred HhCCCCCCCCCCCcceeEEEcCCCCCC------CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 199 SLAPENHMAPDMHKATNFFCVPLQDFT------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+....+. ...+++++.+++.+.. .+..+||+|+.-.-. + +.....+..+...|+|||++++-|-
T Consensus 149 ~~~~~g~----~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y---~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 149 CSDFFGH----VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-Y---EPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp TTSTTTT----SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-H---HHHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhhcCC----CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-c---chHHHHHHHHHHHhCCCcEEEEcCC
Confidence 1111111 1367999999876542 234579999876542 1 1344678899999999999998663
No 316
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.00 E-value=0.011 Score=54.49 Aligned_cols=60 Identities=20% Similarity=0.093 Sum_probs=46.8
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 224 (277)
...+++|+=||.|.++..+...++.-|.++|+++...+.-+.++... +...+++.|+.++
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~--------p~~~~~~~DI~~i 146 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD--------PATHHFNEDIRDI 146 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC--------TTTCEEESCTHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC--------CCcceeccchhhh
Confidence 45799999999999999888777777999999999999888887431 2234556666544
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.95 E-value=0.048 Score=48.32 Aligned_cols=99 Identities=18% Similarity=0.031 Sum_probs=65.1
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCC----CC-CCCC
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL----QD-FTPE 227 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~----~~-~~~~ 227 (277)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-... .+++...++ .+ ....
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~---------vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA---------TVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE---------EECTTSSCHHHHHHSTTSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE---------EECCCCcCHHHHHHhhhhcc
Confidence 45788999999975 7788888776544 8999999999999888753220 011000111 00 0011
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.+.+|+|+-+-.- ...+..+.+.|++||++++.-.
T Consensus 251 ~gg~Dvvid~~G~--------~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 251 PGGVDVVIECAGV--------AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TTCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEECCCC--------HHHHHHHHHHhccCCEEEEEec
Confidence 2479999854321 1467888899999999998643
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.81 E-value=0.026 Score=49.32 Aligned_cols=93 Identities=20% Similarity=0.125 Sum_probs=64.5
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC------C
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------E 227 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~ 227 (277)
..++.+||-+|+|. |..+..+++....+|+++|.|+.-++.+++.-.. .. .|..+..+ .
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~--i~~~~~~~~~~~~~~ 229 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAE------------VA--VNARDTDPAAWLQKE 229 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS------------EE--EETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC------------EE--EeCCCcCHHHHHHHh
Confidence 56788999999985 8888888877555899999999999988764322 11 11111110 0
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.+.+|+|+....- . ..++.+.+.|+|||++++.-
T Consensus 230 ~g~~d~vid~~g~------~--~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 230 IGGAHGVLVTAVS------P--KAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp HSSEEEEEESSCC------H--HHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEEeCCC------H--HHHHHHHHHhccCCEEEEeC
Confidence 1368988754321 1 57788889999999998863
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.54 E-value=0.05 Score=48.68 Aligned_cols=102 Identities=9% Similarity=-0.129 Sum_probs=64.5
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-C------
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T------ 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~------ 225 (277)
..++.+||-+|||. |..+..+++.... +|+++|.|+..++.+++.- .+.+...-.++ .
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG-------------a~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG-------------FETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT-------------CEEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC-------------CcEEcCCCcchHHHHHHHH
Confidence 56788999999986 8888888875443 7999999999988886431 11121111111 0
Q ss_pred CCCCceeEEecchhhhcCC------hhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 PETGRYDVIWVQWCIGHLT------DDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~~~------~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.....||+|+-.-.-.... ..+....+..+.+.|+|||++++.-
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 0112699998554322100 0001246888899999999998753
No 320
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.52 E-value=0.095 Score=46.05 Aligned_cols=98 Identities=16% Similarity=0.085 Sum_probs=62.9
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE---cCC-CCCC-CC
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC---VPL-QDFT-PE 227 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~---~d~-~~~~-~~ 227 (277)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-.. .-+++.. .+. ..+. ..
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~---------~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD---------LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS---------EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC---------EEEcCcccccchHHHHHHHHh
Confidence 55788999999985 8888888876544 799999999998988754221 0011100 000 0000 00
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.+.+|+|+-+-.- . ..+..+.+.|+|||++++.-
T Consensus 240 ~~g~D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTGA------E--ASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSCC------H--HHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCCC------h--HHHHHHHHHhcCCCEEEEEe
Confidence 1468998854321 1 46778889999999998763
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.50 E-value=0.058 Score=47.34 Aligned_cols=99 Identities=15% Similarity=-0.008 Sum_probs=64.5
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC--C-CCCC
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--T-PETG 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~-~~~~ 229 (277)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-... -++....++.+. . ....
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~---------vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD---------IINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE---------EECGGGSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce---------EEcCCCcCHHHHHHHHcCCC
Confidence 56788999999985 7888888876544 7999999999999888753220 011000111000 0 1123
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.+|+|+-+-.- . ..+..+.+.|+|||++++.-.
T Consensus 235 g~D~v~d~~g~------~--~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 235 GVDKVVIAGGD------V--HTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp CEEEEEECSSC------T--THHHHHHHHEEEEEEEEECCC
T ss_pred CCCEEEECCCC------h--HHHHHHHHHHhcCCEEEEecc
Confidence 69999854321 1 467888889999999987643
No 322
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.49 E-value=0.057 Score=46.95 Aligned_cols=92 Identities=9% Similarity=0.040 Sum_probs=61.9
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC---CC----
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD---FT---- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~---- 225 (277)
..++.+||-.|| |.|..+..++.....+|+++|.++..++.+++ +.. . ...|..+ +.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~--------~-----~~~d~~~~~~~~~~~~ 208 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGF--------D-----AAFNYKTVNSLEEALK 208 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTC--------S-----EEEETTSCSCHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCC--------c-----EEEecCCHHHHHHHHH
Confidence 557789999998 67777777776544479999999998888843 321 0 1112222 10
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...+.+|+|+.+-. . ..+..+.+.|+|||++++.-
T Consensus 209 ~~~~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 209 KASPDGYDCYFDNVG-------G--EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHCTTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred HHhCCCCeEEEECCC-------h--HHHHHHHHHHhcCCEEEEEe
Confidence 01147999986554 1 24678889999999998764
No 323
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.46 E-value=0.072 Score=46.71 Aligned_cols=95 Identities=15% Similarity=-0.005 Sum_probs=62.6
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcC-CCCCC------C
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFT------P 226 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~------~ 226 (277)
..++.+||-+|+|. |..+..+++....+|+++|.++.-++.+++.-.. ..+... -.++. .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD------------VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS------------EEEECCTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC------------EEEcCcccccHHHHHHHHh
Confidence 45778999999875 7778878776544699999999999988753211 111111 01110 0
Q ss_pred C---CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 227 E---TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~---~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
. ...+|+|+-+-.- . ..++.+.+.|+|||++++.-
T Consensus 234 ~~~~g~g~D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSGN------E--KCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHSSSCCSEEEECSCC------H--HHHHHHHHHSCTTCEEEECS
T ss_pred ccccCCCCCEEEECCCC------H--HHHHHHHHHHhcCCEEEEEe
Confidence 0 1468999854331 1 46778889999999998863
No 324
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.32 E-value=0.059 Score=48.19 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=51.6
Q ss_pred CCCccEEEeeccccHHHHHHHHhC------CC--cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY------FN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE 227 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~------~~--~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 227 (277)
+.+..|+|+|.|.|.++..+++.. +. +++.||+|+...+.-++++... .++.+. .++.+++.
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~--------~~v~W~-~~l~~lp~- 148 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI--------RNIHWH-DSFEDVPE- 148 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC--------SSEEEE-SSGGGSCC-
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC--------CCeEEe-CChhhcCC-
Confidence 345789999999999998887541 11 7999999999988777776541 134443 23333331
Q ss_pred CCceeEEecchhhhcCC
Q 023787 228 TGRYDVIWVQWCIGHLT 244 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~ 244 (277)
..=+|+++.+|..+|
T Consensus 149 --~~~~viANE~fDAlP 163 (387)
T 1zkd_A 149 --GPAVILANEYFDVLP 163 (387)
T ss_dssp --SSEEEEEESSGGGSC
T ss_pred --CCeEEEeccccccCc
Confidence 234677777776665
No 325
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.24 E-value=0.031 Score=50.49 Aligned_cols=48 Identities=23% Similarity=0.320 Sum_probs=40.9
Q ss_pred CCCCccEEEeeccccHHHHHHH-HhCC--CcEEEEeCCHHHHHHHHHHhCC
Q 023787 155 NNQHLVALDCGSGIGRITKNLL-IRYF--NEVDLLEPVSHFLDAARESLAP 202 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~-~~~~--~~v~gvD~S~~~l~~a~~~~~~ 202 (277)
..++..++|+||+.|..+..++ .... .+|+++|++|...+..++++..
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4578899999999999999887 4443 4899999999999999998764
No 326
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.18 E-value=0.12 Score=45.56 Aligned_cols=97 Identities=19% Similarity=0.033 Sum_probs=65.3
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCC--CCC-----
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ--DFT----- 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~----- 225 (277)
..++.+||-+|+|. |..+..+++.... .|+++|.|+.-++.+++. .. ..+++...+.. ++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~---------~~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP---------EVVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT---------TCEEEECCSCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch---------hcccccccccchHHHHHHHHH
Confidence 56788999999975 7888888876544 599999999999999887 32 11222211100 000
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.....+|+|+-+-.- . ..+..+.+.|++||++++.-
T Consensus 247 ~t~g~g~Dvvid~~g~------~--~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALECTGV------E--SSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEECSCC------H--HHHHHHHHHSCTTCEEEECC
T ss_pred HhCCCCCCEEEECCCC------h--HHHHHHHHHhcCCCEEEEEc
Confidence 112479999854331 1 46788889999999999864
No 327
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.18 E-value=0.027 Score=49.44 Aligned_cols=91 Identities=15% Similarity=0.044 Sum_probs=63.7
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+||-+|+|. |..+..+++....+|+++|.|+.-++.+++.-.. ..+ .+...+ . ..+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~v~-~~~~~~--~-~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVK------------HFY-TDPKQC--K-EELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCS------------EEE-SSGGGC--C-SCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCC------------eec-CCHHHH--h-cCCCE
Confidence 56788999999985 8888888876555899999999999988763221 111 222221 1 27999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+-+-.- . ..+..+.+.|+|||++++.-
T Consensus 238 vid~~g~------~--~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IISTIPT------H--YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEECCCS------C--CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCc------H--HHHHHHHHHHhcCCEEEEEC
Confidence 9854331 1 25677888999999999864
No 328
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.15 E-value=0.076 Score=46.32 Aligned_cols=95 Identities=13% Similarity=-0.025 Sum_probs=61.3
Q ss_pred CCCCccEEEeecc--ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023787 155 NNQHLVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (277)
Q Consensus 155 ~~~~~~VLDiGcG--tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (277)
..++.+||-+|+| .|..+..+++....+|+++|.++.-++.+++.-.. ..+...-.++. .
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~------------~~~~~~~~~~~~~~~~~~ 209 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA------------YVIDTSTAPLYETVMELT 209 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc------------EEEeCCcccHHHHHHHHh
Confidence 5678899999987 67788777765444799999999988888874222 11111111110 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
....+|+|+.+-.- ..+....+.|+|||++++.-.
T Consensus 210 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 210 NGIGADAAIDSIGG---------PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp TTSCEEEEEESSCH---------HHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCCcEEEECCCC---------hhHHHHHHHhcCCCEEEEEee
Confidence 12479999865432 112334479999999998743
No 329
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.07 E-value=0.067 Score=46.53 Aligned_cols=93 Identities=10% Similarity=-0.011 Sum_probs=63.5
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||-.|| |.|..+..+++....+|++++.++.-++.+.+.+... .. .|..+..
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~-----------~~--~~~~~~~~~~~~~~ 213 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD-----------GA--IDYKNEDLAAGLKR 213 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS-----------EE--EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC-----------EE--EECCCHHHHHHHHH
Confidence 567889999998 5788888887765558999999999888884443221 11 1111110
Q ss_pred CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...+.+|+|+.+-. . ..+..+.+.|++||++++.-
T Consensus 214 ~~~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 214 ECPKGIDVFFDNVG-------G--EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp HCTTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred hcCCCceEEEECCC-------c--chHHHHHHHHhhCCEEEEEe
Confidence 01247999986443 1 36788889999999999863
No 330
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.03 E-value=0.095 Score=46.20 Aligned_cols=95 Identities=14% Similarity=-0.062 Sum_probs=64.4
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------CC
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PE 227 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~ 227 (277)
..++.+||-+|+|. |..+..+++....+|+++|.++.-++.+++.-.. ..+..+-.++. ..
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~~~ 254 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGAD------------HGINRLEEDWVERVYALTG 254 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCC------------EEEcCCcccHHHHHHHHhC
Confidence 56788999999885 7788878876555899999999999998775322 11111111110 11
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
...+|+|+-+-. . ..+..+.+.|+|||++++.-.
T Consensus 255 g~g~D~vid~~g----~-----~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 255 DRGADHILEIAG----G-----AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp TCCEEEEEEETT----S-----SCHHHHHHHEEEEEEEEEECC
T ss_pred CCCceEEEECCC----h-----HHHHHHHHHhhcCCEEEEEec
Confidence 237999986543 1 246677789999999998743
No 331
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.87 E-value=0.08 Score=46.19 Aligned_cols=93 Identities=9% Similarity=0.034 Sum_probs=63.5
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC---CC----
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD---FT---- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~---- 225 (277)
..++.+||-.|| |.|..+..+++....+|++++.++.-++.+++.+... .. .|..+ +.
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~-----------~~--~d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD-----------DA--FNYKEESDLTAALK 219 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS-----------EE--EETTSCSCSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc-----------eE--EecCCHHHHHHHHH
Confidence 557889999997 6788888777765457999999999888887544220 01 12211 10
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...+.+|+|+.+-. . ..+..+.+.|++||++++.-
T Consensus 220 ~~~~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 220 RCFPNGIDIYFENVG-------G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HHCTTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred HHhCCCCcEEEECCC-------H--HHHHHHHHHHhcCCEEEEEc
Confidence 01146999986543 2 36788889999999998863
No 332
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.84 E-value=0.054 Score=46.84 Aligned_cols=107 Identities=14% Similarity=0.076 Sum_probs=59.0
Q ss_pred CCCccEEEeeccccHHHHHHH----HhCCC---cEEEEeCC------------HHHHHHHHHHhCCCCCCCCCCCcceeE
Q 023787 156 NQHLVALDCGSGIGRITKNLL----IRYFN---EVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNF 216 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~----~~~~~---~v~gvD~S------------~~~l~~a~~~~~~~~~~~~~~~~~~~~ 216 (277)
.+..+|||+|-|||......+ +..+. +++.+|.. ....+.......... ......++
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~----~~~v~L~l 170 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYE----GERLSLKV 170 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEE----CSSEEEEE
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcccc----CCcEEEEE
Confidence 345789999999998754332 22333 45566531 112222222221100 00234566
Q ss_pred EEcCCCCCC--CCCCceeEEecch-hhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 217 FCVPLQDFT--PETGRYDVIWVQW-CIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 217 ~~~d~~~~~--~~~~~fD~Vi~~~-~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
..+|+.+.- .+...||+|+.-. +-..-|+-=-..+|+.++++++|||++.
T Consensus 171 ~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 171 LLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp EESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred EechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 677765432 3345799998643 2112121002479999999999999986
No 333
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.80 E-value=0.27 Score=43.97 Aligned_cols=98 Identities=11% Similarity=-0.080 Sum_probs=60.4
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-.. .. .+..+..
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~v--i~~~~~~~~~~i~~ 276 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD------------HV--IDPTKENFVEAVLD 276 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS------------EE--ECTTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC------------EE--EcCCCCCHHHHHHH
Confidence 56788999999874 7777777776544 899999999999999775322 01 1111110
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.....+|+|+-+-.-. ......+++.+.+.+++||++++.-
T Consensus 277 ~t~g~g~D~vid~~g~~---~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 277 YTNGLGAKLFLEATGVP---QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp HTTTCCCSEEEECSSCH---HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred HhCCCCCCEEEECCCCc---HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 1123699998543211 0012233333345559999999864
No 334
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.70 E-value=0.13 Score=44.77 Aligned_cols=94 Identities=19% Similarity=0.111 Sum_probs=63.0
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (277)
..++.+||-+|+ |.|..+..+++....+|++++.++.-++.+++.-.. ..+...-.++. .
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~~~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAE------------YLINASKEDILRQVLKFT 213 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc------------EEEeCCCchHHHHHHHHh
Confidence 567889999994 578888878776555899999999999888763211 11111111110 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
....+|+|+.+-.- ..+..+.+.|+|||++++.-
T Consensus 214 ~~~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 214 NGKGVDASFDSVGK---------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp TTSCEEEEEECCGG---------GGHHHHHHHEEEEEEEEECC
T ss_pred CCCCceEEEECCCh---------HHHHHHHHHhccCCEEEEEc
Confidence 12469999865441 35677788999999999864
No 335
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.69 E-value=0.11 Score=45.43 Aligned_cols=93 Identities=17% Similarity=0.114 Sum_probs=62.3
Q ss_pred CCCCccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC------
Q 023787 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (277)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------ 227 (277)
..++.+||-+|+| .|..+..+++....+|+++|.++.-++.+++. .. + ...|..+..+.
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-Ga------------~-~~~d~~~~~~~~~~~~~ 227 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL-GA------------D-LVVNPLKEDAAKFMKEK 227 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TC------------S-EEECTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC-CC------------C-EEecCCCccHHHHHHHH
Confidence 4577899999986 57777777766545899999999999988753 21 0 11222211100
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.+.+|+|+.+-.. ...++.+.+.|++||++++.-
T Consensus 228 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 228 VGGVHAAVVTAVS--------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp HSSEEEEEESSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred hCCCCEEEECCCC--------HHHHHHHHHHhhcCCEEEEec
Confidence 0369999855431 146778888999999998753
No 336
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.66 E-value=0.11 Score=46.32 Aligned_cols=100 Identities=9% Similarity=-0.093 Sum_probs=65.1
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC-CC------
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT------ 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~------ 225 (277)
..++.+||-+|||. |..+..+++.... +|+++|.++.-++.+++.- . +.+...-.+ +.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG-a------------~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG-F------------EIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT-C------------EEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC-C------------cEEccCCcchHHHHHHHH
Confidence 56788999999875 8888888876544 7999999999999987631 1 111111001 00
Q ss_pred CCCCceeEEecchhhh---------cCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 PETGRYDVIWVQWCIG---------HLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~---------~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.....+|+|+-+-.-. |.+ +....+..+.+.|++||++++.-
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHE--APATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSB--CTTHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCCEEEECCCCccccccccccccc--chHHHHHHHHHHHhcCCEEEEec
Confidence 0113699998543311 111 22257888999999999998764
No 337
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.63 E-value=0.11 Score=44.87 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=63.4
Q ss_pred CCCCccEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023787 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (277)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (277)
..++.+||-+| +|.|..+..+++....+|++++.++.-++.+++.-.. ..+...-.++. .
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAW------------ETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEEeCCCccHHHHHHHHh
Confidence 56788999999 3578888877776444799999999999988864221 11111111110 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
....+|+|+.+-.- ..+..+.+.|+|||++++.-.
T Consensus 206 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQ---------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp TTCCEEEEEESSCG---------GGHHHHHTTEEEEEEEEECCC
T ss_pred CCCCceEEEECCCh---------HHHHHHHHHhcCCCEEEEEec
Confidence 12479999865431 356678889999999998743
No 338
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.53 E-value=0.16 Score=44.63 Aligned_cols=92 Identities=12% Similarity=0.020 Sum_probs=61.5
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||-.|+ |.|..+..+++....+|++++.++.-++.+++.-.. .. .|..+..
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~~--~d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH------------EV--FNHREVNYIDKIKK 233 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EE--EETTSTTHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC------------EE--EeCCCchHHHHHHH
Confidence 557789999997 677777777766545799999999988877653111 11 1221111
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.....+|+|+.+-.- ..+..+.+.|+|||++++.-
T Consensus 234 ~~~~~~~D~vi~~~G~---------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 234 YVGEKGIDIIIEMLAN---------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHCTTCEEEEEESCHH---------HHHHHHHHHEEEEEEEEECC
T ss_pred HcCCCCcEEEEECCCh---------HHHHHHHHhccCCCEEEEEe
Confidence 112369999866441 24667788999999998753
No 339
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.53 E-value=0.25 Score=43.13 Aligned_cols=91 Identities=15% Similarity=0.073 Sum_probs=61.5
Q ss_pred CCccEEEeecc-ccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--------C
Q 023787 157 QHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--------P 226 (277)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------~ 226 (277)
++.+||-+|+| .|..+..+++.... +|+++|.++.-++.+++.-.. .. .|..+.. .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~------------~~--~~~~~~~~~~~v~~~~ 232 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGAD------------YV--INPFEEDVVKEVMDIT 232 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCS------------EE--ECTTTSCHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC------------EE--ECCCCcCHHHHHHHHc
Confidence 77899999996 37777777766444 799999999998888754221 01 1211100 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
....+|+|+.+-.. ...++.+.+.|++||++++.-
T Consensus 233 ~g~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 233 DGNGVDVFLEFSGA--------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TTSCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEc
Confidence 12369999865431 146778889999999998764
No 340
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.53 E-value=0.09 Score=46.01 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=62.1
Q ss_pred CCCCccEEEeecc--ccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-----CC
Q 023787 155 NNQHLVALDCGSG--IGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----TP 226 (277)
Q Consensus 155 ~~~~~~VLDiGcG--tG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~ 226 (277)
..++.+||-.|+| .|..+..+++.. ..+|+++|.++..++.+++.-.. ..+...-.+. ..
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD------------YVINASMQDPLAEIRRI 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCC------------EEecCCCccHHHHHHHH
Confidence 5577899999998 666777776654 44799999999998888654211 1111110111 01
Q ss_pred CC-CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 227 ET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~~-~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.. +.+|+|+.+-.- ...++.+.+.|+|||++++.-
T Consensus 236 ~~~~~~d~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS--------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTTSCEEEEEESCCC--------HHHHTTGGGGEEEEEEEEECC
T ss_pred hcCCCceEEEECCCC--------HHHHHHHHHHHhcCCEEEEEC
Confidence 11 479999865431 146778889999999998763
No 341
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.46 E-value=0.065 Score=46.84 Aligned_cols=95 Identities=15% Similarity=-0.001 Sum_probs=64.6
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (277)
..++.+||-+|+|. |..+..+++.. ..+|+++|.+++-++.+++.-.. . .+..+ .++. .
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~---------~---~i~~~-~~~~~~v~~~t 235 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD---------A---AVKSG-AGAADAIRELT 235 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS---------E---EEECS-TTHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC---------E---EEcCC-CcHHHHHHHHh
Confidence 45788999999975 88888888764 56899999999999998764222 1 11111 0110 0
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
....+|+|+-+-.- . ..++.+.+.|+|||++++.-.
T Consensus 236 ~g~g~d~v~d~~G~------~--~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 236 GGQGATAVFDFVGA------Q--STIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GGGCEEEEEESSCC------H--HHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCeEEEECCCC------H--HHHHHHHHHHhcCCEEEEECC
Confidence 11369998854331 1 478888999999999998643
No 342
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.44 E-value=0.23 Score=43.76 Aligned_cols=94 Identities=13% Similarity=0.046 Sum_probs=62.7
Q ss_pred CCccEEEee-c-cccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEE---EcCCCCCCCCCCc
Q 023787 157 QHLVALDCG-S-GIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF---CVPLQDFTPETGR 230 (277)
Q Consensus 157 ~~~~VLDiG-c-GtG~~s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~---~~d~~~~~~~~~~ 230 (277)
++.+||-+| + |.|..+..+++. +..+|+++|.++.-++.+++.-.+ .-++.. ...+.+ ...+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad---------~vi~~~~~~~~~v~~--~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAH---------HVIDHSKPLAAEVAA--LGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCS---------EEECTTSCHHHHHHT--TCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCC---------EEEeCCCCHHHHHHH--hcCCC
Confidence 678999998 4 468889988876 456899999999999988763221 001000 000111 12357
Q ss_pred eeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 231 fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+|+|+-+-. -...+..+.+.|+|||++++..
T Consensus 240 ~Dvvid~~g--------~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 240 PAFVFSTTH--------TDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp EEEEEECSC--------HHHHHHHHHHHSCTTCEEEECS
T ss_pred ceEEEECCC--------chhhHHHHHHHhcCCCEEEEEC
Confidence 999985432 1147788889999999999863
No 343
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.40 E-value=0.061 Score=47.67 Aligned_cols=95 Identities=16% Similarity=0.026 Sum_probs=62.4
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcC-CCCCCCCCCcee
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFTPETGRYD 232 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~fD 232 (277)
..++.+||-+|+|. |..+..+++....+|+++|.|+.-++.+++.-.. .-++....+ +.... +.+|
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~---------~vi~~~~~~~~~~~~---~g~D 259 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD---------EVVNSRNADEMAAHL---KSFD 259 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS---------EEEETTCHHHHHTTT---TCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---------EEeccccHHHHHHhh---cCCC
Confidence 55788999999985 7888888876555799999999999988864221 001100001 11111 4799
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+|+-.-.- + ..++.+.+.|+|||++++.-
T Consensus 260 vvid~~g~---~-----~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 260 FILNTVAA---P-----HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEEECCSS---C-----CCHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCC---H-----HHHHHHHHHhccCCEEEEec
Confidence 99854331 1 24567788999999998753
No 344
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.30 E-value=0.16 Score=44.21 Aligned_cols=93 Identities=12% Similarity=-0.012 Sum_probs=63.4
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||-+|+ |.|..+..+++....+|+++|.++.-++.+++.-.. .. .|..+..
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~------------~~--~d~~~~~~~~~~~~ 229 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGAD------------ET--VNYTHPDWPKEVRR 229 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS------------EE--EETTSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC------------EE--EcCCcccHHHHHHH
Confidence 557889999998 688888888876545799999999999888753211 01 1221111
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.....+|+|+.+-. . ..++.+.+.|+++|++++.-.
T Consensus 230 ~~~~~~~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 230 LTGGKGADKVVDHTG-A--------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp HTTTTCEEEEEESSC-S--------SSHHHHHHHEEEEEEEEESSC
T ss_pred HhCCCCceEEEECCC-H--------HHHHHHHHhhccCCEEEEEec
Confidence 11247999986554 1 246677889999999987643
No 345
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.29 E-value=0.15 Score=44.17 Aligned_cols=93 Identities=13% Similarity=0.017 Sum_probs=61.9
Q ss_pred CCCCccEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||-.| +|.|..+..++.....+|+++|.++..++.+++.-.. .. .|..+..
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~------------~~--~~~~~~~~~~~~~~ 203 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW------------QV--INYREEDLVERLKE 203 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS------------EE--EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC------------EE--EECCCccHHHHHHH
Confidence 55788999999 4677777777765444799999999888888763211 01 1221111
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.....+|+|+.+-. . ..++.+.+.|++||++++.-.
T Consensus 204 ~~~~~~~D~vi~~~g----~-----~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG----R-----DTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HTTTCCEEEEEECSC----G-----GGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCc----h-----HHHHHHHHHhcCCCEEEEEec
Confidence 11236999986644 1 356778889999999988643
No 346
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.23 E-value=0.018 Score=50.41 Aligned_cols=95 Identities=15% Similarity=-0.033 Sum_probs=62.2
Q ss_pred CCccEEEeeccc-cHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE-cCC-CCCCCCCCce
Q 023787 157 QHLVALDCGSGI-GRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPL-QDFTPETGRY 231 (277)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~--~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~-~d~-~~~~~~~~~f 231 (277)
++.+||-+|+|. |..+..+++.. ..+|+++|.|+.-++.+++.-.. .-+++.. .+. ..+. ....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~---------~vi~~~~~~~~~~~~~-~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD---------YVSEMKDAESLINKLT-DGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS---------EEECHHHHHHHHHHHH-TTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC---------EEeccccchHHHHHhh-cCCCc
Confidence 678999999974 77778787765 44799999999999988764221 1011100 010 0110 12379
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|+-.-.- . ..++.+.+.|+|||++++.-
T Consensus 240 D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 240 SIAIDLVGT------E--ETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEESSCC------H--HHHHHHHHHEEEEEEEEECC
T ss_pred cEEEECCCC------h--HHHHHHHHHhhcCCEEEEeC
Confidence 999855431 1 46788889999999998763
No 347
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.14 E-value=0.1 Score=45.08 Aligned_cols=90 Identities=12% Similarity=0.028 Sum_probs=60.9
Q ss_pred cEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcC-CCCCCCCCCceeEEec
Q 023787 160 VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFTPETGRYDVIWV 236 (277)
Q Consensus 160 ~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~fD~Vi~ 236 (277)
+||-+|+ |.|..+..+++....+|++++.|+.-++.+++.-.. .-++....+ ... ...+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~---------~vi~~~~~~~~~~--~~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGAN---------RILSRDEFAESRP--LEKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCS---------EEEEGGGSSCCCS--SCCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC---------EEEecCCHHHHHh--hcCCCccEEEE
Confidence 4999997 578888888877555899999999999999774322 111111111 111 22357999875
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+- . . ..+..+.+.|+|+|++++.-
T Consensus 218 ~~-----g--~--~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 218 TV-----G--D--KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp SS-----C--H--HHHHHHHHTEEEEEEEEECC
T ss_pred CC-----C--c--HHHHHHHHHHhcCCEEEEEe
Confidence 42 2 2 37888899999999998864
No 348
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.09 E-value=0.12 Score=45.69 Aligned_cols=95 Identities=15% Similarity=0.010 Sum_probs=62.4
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEc-CC-CCCC-----
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~-d~-~~~~----- 225 (277)
..++.+||-+|+|. |..+..+++.... +|+++|.|+.-++.+++.-.. ..+.. +. .++.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT------------DFVNPNDHSEPISQVLSK 257 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc------------eEEeccccchhHHHHHHH
Confidence 56778999999874 7778878776544 799999999999988753211 01110 00 0110
Q ss_pred CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCC-cEEEEEe
Q 023787 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (277)
...+.+|+|+-+-.- ...+..+.+.|+|| |++++.-
T Consensus 258 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 258 MTNGGVDFSLECVGN--------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCC--------HHHHHHHHHHhhcCCcEEEEEc
Confidence 011369998854321 14678888999999 9998764
No 349
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.09 E-value=0.21 Score=43.79 Aligned_cols=93 Identities=14% Similarity=-0.030 Sum_probs=61.5
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||-.|+ |.|..+..++.....+|+++|.++.-++.+++.-.. .. .|..+..
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~------------~~--~~~~~~~~~~~~~~ 225 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA------------AG--FNYKKEDFSEATLK 225 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS------------EE--EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc------------EE--EecCChHHHHHHHH
Confidence 567889999984 678877777766555799999999998888553211 01 1111110
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.....+|+|+.+-.- ..+..+.+.|++||++++.-.
T Consensus 226 ~~~~~~~d~vi~~~G~---------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 226 FTKGAGVNLILDCIGG---------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp HTTTSCEEEEEESSCG---------GGHHHHHHHEEEEEEEEECCC
T ss_pred HhcCCCceEEEECCCc---------hHHHHHHHhccCCCEEEEEec
Confidence 112469999865431 235667788999999988643
No 350
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.05 E-value=0.1 Score=45.63 Aligned_cols=94 Identities=11% Similarity=-0.011 Sum_probs=62.9
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCC---CCC----
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ---DFT---- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~---- 225 (277)
..++.+||-+|+ |.|..+..++.....+|+++|.++..++.+++. .. + ...|.. ++.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~-g~------------~-~~~d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI-GG------------E-VFIDFTKEKDIVGAVL 232 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT-TC------------C-EEEETTTCSCHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc-CC------------c-eEEecCccHhHHHHHH
Confidence 557789999998 578887777765444799999998888877653 11 0 111322 110
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
...+.+|+|+.+-.. ...++.+.+.|++||++++.-.
T Consensus 233 ~~~~~~~D~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 233 KATDGGAHGVINVSVS--------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHTSCEEEEEECSSC--------HHHHHHHTTSEEEEEEEEECCC
T ss_pred HHhCCCCCEEEECCCc--------HHHHHHHHHHHhcCCEEEEEeC
Confidence 001269999865431 1477888999999999987643
No 351
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.90 E-value=0.19 Score=44.53 Aligned_cols=96 Identities=15% Similarity=0.006 Sum_probs=63.2
Q ss_pred CCCCccEEEeecc-ccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcC--CCCCC-----
Q 023787 155 NNQHLVALDCGSG-IGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP--LQDFT----- 225 (277)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~----- 225 (277)
..++.+||-+|+| .|..+..+++. +..+|+++|.++.-++.+++.-.. . .+... -.++.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~---------~---vi~~~~~~~~~~~~i~~ 258 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN---------E---FVNPKDHDKPIQEVIVD 258 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC---------E---EECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc---------E---EEccccCchhHHHHHHH
Confidence 5678899999997 47888877766 444799999999999988753221 0 11110 01110
Q ss_pred CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCC-cEEEEEec
Q 023787 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKEN 270 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e~ 270 (277)
...+.+|+|+-+-.- ...+..+.+.|++| |++++.-.
T Consensus 259 ~~~gg~D~vid~~g~--------~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 259 LTDGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred hcCCCCCEEEECCCC--------HHHHHHHHHHhhccCCEEEEEcc
Confidence 112479999854331 14678889999997 99988643
No 352
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.88 E-value=0.17 Score=44.66 Aligned_cols=96 Identities=16% Similarity=-0.012 Sum_probs=62.3
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCC-CCCC-----C
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFT-----P 226 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~-----~ 226 (277)
..++.+||-+|+|. |..+..+++.... +|+++|.|+.-++.+++.-.. ..++. .+. .++. .
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~---------~vi~~--~~~~~~~~~~v~~~ 256 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT---------ECINP--QDFSKPIQEVLIEM 256 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS---------EEECG--GGCSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc---------eEecc--ccccccHHHHHHHH
Confidence 56788999999874 7777777765443 799999999999988764221 00100 010 0110 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCC-cEEEEEe
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (277)
..+.+|+|+-+-.- ...++.+.+.|+|+ |++++.-
T Consensus 257 ~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 257 TDGGVDYSFECIGN--------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp TTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred hCCCCCEEEECCCc--------HHHHHHHHHhhccCCcEEEEEe
Confidence 12369999854321 14678888999999 9998764
No 353
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.77 E-value=0.11 Score=45.16 Aligned_cols=59 Identities=7% Similarity=-0.031 Sum_probs=45.4
Q ss_pred HHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCC
Q 023787 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE 203 (277)
Q Consensus 139 ~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~ 203 (277)
..++..++... ..++..|||.-||+|..+...... ..+.+|+|+++.+.+.+++++...
T Consensus 239 ~~l~~~~i~~~-----~~~~~~VlDpF~GsGtt~~aa~~~-gr~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 239 AKLPEFFIRML-----TEPDDLVVDIFGGSNTTGLVAERE-SRKWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp THHHHHHHHHH-----CCTTCEEEETTCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHGGGSCS
T ss_pred HHHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHc-CCCEEEEeCCHHHHHHHHHHHHhc
Confidence 34455554322 347789999999999999866544 457999999999999999998764
No 354
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.76 E-value=0.14 Score=44.67 Aligned_cols=93 Identities=13% Similarity=0.038 Sum_probs=63.2
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (277)
..++.+||-+|+ |.|..+..+++....+|++++.++.-++.+++.-.. ..+..+ .++. .
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~v~~~~-~~~~~~v~~~~ 223 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGAD------------IVLPLE-EGWAKAVREAT 223 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS------------EEEESS-TTHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc------------EEecCc-hhHHHHHHHHh
Confidence 567889999997 578888888876555899999999988888874221 111112 2111 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
....+|+|+.+-.- ..+..+.+.|++||++++.-
T Consensus 224 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 224 GGAGVDMVVDPIGG---------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTSCEEEEEESCC-----------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCCceEEEECCch---------hHHHHHHHhhcCCCEEEEEE
Confidence 12369999865431 24677888999999999863
No 355
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.76 E-value=0.13 Score=45.49 Aligned_cols=96 Identities=14% Similarity=-0.093 Sum_probs=62.2
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCC-CCCC-----C
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFT-----P 226 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~-----~ 226 (277)
..++.+||-+|+|. |..+..+++.. ..+|+++|.|+.-++.+++.-.. ..++. .+. .++. .
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~---------~vi~~--~~~~~~~~~~i~~~ 257 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT---------ECLNP--KDYDKPIYEVICEK 257 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS---------EEECG--GGCSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc---------EEEec--ccccchHHHHHHHH
Confidence 56788999999874 77777777654 43799999999999988753211 00110 000 0110 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCC-cEEEEEe
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (277)
..+.+|+|+-.-.- ...+..+.+.|++| |++++.-
T Consensus 258 t~gg~Dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 258 TNGGVDYAVECAGR--------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp TTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred hCCCCCEEEECCCC--------HHHHHHHHHHHhcCCCEEEEEc
Confidence 12379999854321 14678888999999 9998764
No 356
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.76 E-value=0.34 Score=42.77 Aligned_cols=96 Identities=14% Similarity=-0.082 Sum_probs=62.2
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCC-CCCC-----C
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFT-----P 226 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~-----~ 226 (277)
..++.+||-+|+|. |..+..+++.... +|+++|.|+.-++.+++.-.. ..++. .+. .++. .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~---------~vi~~--~~~~~~~~~~v~~~ 261 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT---------DCLNP--RELDKPVQDVITEL 261 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS---------EEECG--GGCSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc---------EEEcc--ccccchHHHHHHHH
Confidence 56788999999874 7788878876544 799999999998888753221 00100 000 0110 0
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCC-cEEEEEe
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (277)
..+.+|+|+-+-.- ...++.+.+.|++| |++++.-
T Consensus 262 ~~~g~Dvvid~~G~--------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 262 TAGGVDYSLDCAGT--------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HTSCBSEEEESSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred hCCCccEEEECCCC--------HHHHHHHHHHhhcCCCEEEEEC
Confidence 11369998854321 14678888999999 9998753
No 357
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.72 E-value=0.24 Score=43.69 Aligned_cols=95 Identities=13% Similarity=-0.056 Sum_probs=62.1
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEc-CC-CCCC-----
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~-d~-~~~~----- 225 (277)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-.. ..+.. +. .++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT------------ECVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc------------eEecccccchhHHHHHHH
Confidence 56778999999875 7778878776544 799999999999988753211 01110 00 0110
Q ss_pred CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCC-cEEEEEe
Q 023787 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpG-G~lii~e 269 (277)
...+.+|+|+-+-.- ...+..+.+.|++| |++++.-
T Consensus 257 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 257 MSNGGVDFSFEVIGR--------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HhCCCCcEEEECCCC--------HHHHHHHHHHhhcCCcEEEEec
Confidence 112369998854321 14677888999999 9998763
No 358
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.68 E-value=0.16 Score=44.73 Aligned_cols=94 Identities=12% Similarity=-0.008 Sum_probs=63.1
Q ss_pred CCCCccEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
..++.+||-+| .|.|..+..+++....+|++++.+++-++.+++.-.. ..+..+-.++. ..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCD------------RPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCc------------EEEecCChhHHHHHHHhc
Confidence 45778999999 5688888888876555799999999888888763111 11111111110 01
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...+|+|+.+-. . ..++.+.+.|+++|++++.-
T Consensus 229 ~~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 229 PEGVDVVYESVG-------G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TTCEEEEEECSC-------T--HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC-------H--HHHHHHHHHHhcCCEEEEEe
Confidence 246999986543 1 46778889999999998864
No 359
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.56 E-value=0.25 Score=42.83 Aligned_cols=93 Identities=13% Similarity=0.039 Sum_probs=62.5
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||-.|+ |.|..+..++.....+|+++|.++.-++.+++.-.. .. .|..+..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~------------~~--~d~~~~~~~~~i~~ 208 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCH------------HT--INYSTQDFAEVVRE 208 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS------------EE--EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EE--EECCCHHHHHHHHH
Confidence 557789999995 678888777766545799999999888888763211 01 1222111
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.....+|+|+.+-.- ..++.+.+.|++||++++.-.
T Consensus 209 ~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 209 ITGGKGVDVVYDSIGK---------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHTTCCEEEEEECSCT---------TTHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCCeEEEECCcH---------HHHHHHHHhhccCCEEEEEec
Confidence 012369999865431 356778889999999987643
No 360
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.53 E-value=0.1 Score=44.93 Aligned_cols=88 Identities=17% Similarity=0.107 Sum_probs=59.0
Q ss_pred CCCCccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
..++.+||-+|+| .|..+..+++....+|++++ |+.-++.+++.-.. ..+ .|...+ .+.+|+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~v~-~d~~~v---~~g~Dv 202 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVR------------HLY-REPSQV---TQKYFA 202 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEE------------EEE-SSGGGC---CSCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCC------------EEE-cCHHHh---CCCccE
Confidence 5678999999996 47888888776444899999 99888888774221 111 132222 368999
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
|+-+-.- ..+..+.+.|+|||++++.
T Consensus 203 v~d~~g~---------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 203 IFDAVNS---------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EECC----------------TTGGGEEEEEEEEEE
T ss_pred EEECCCc---------hhHHHHHHHhcCCCEEEEE
Confidence 9854331 1235677899999999886
No 361
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.49 E-value=0.61 Score=34.83 Aligned_cols=92 Identities=12% Similarity=-0.013 Sum_probs=56.1
Q ss_pred CccEEEeeccc-cHHHHHHH-HhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023787 158 HLVALDCGSGI-GRITKNLL-IRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (277)
Q Consensus 158 ~~~VLDiGcGt-G~~s~~l~-~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (277)
..+|+=+|||. |......+ +.+. .|+++|.+++.++.+++. .+.++.+|..+.. ..-..+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~-------------g~~~i~gd~~~~~~l~~a~i~~a 72 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER-------------GVRAVLGNAANEEIMQLAHLECA 72 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------------TCEEEESCTTSHHHHHHTTGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc-------------CCCEEECCCCCHHHHHhcCcccC
Confidence 35899999974 44333333 3344 599999999998887652 2456777776532 112468
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
|+|++...- +.....+....+.+.|+..++..
T Consensus 73 d~vi~~~~~-----~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 73 KWLILTIPN-----GYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp SEEEECCSC-----HHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CEEEEECCC-----hHHHHHHHHHHHHHCCCCeEEEE
Confidence 888765431 12122344456667888877654
No 362
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.49 E-value=0.14 Score=51.20 Aligned_cols=47 Identities=19% Similarity=0.085 Sum_probs=41.0
Q ss_pred CCCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAP 202 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~ 202 (277)
....+++|+=||.|.++..+...++ ..+.++|+++...+.-+.++..
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~ 585 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPG 585 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTT
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC
Confidence 4567999999999999999988887 5688999999999988888754
No 363
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.42 E-value=0.08 Score=46.24 Aligned_cols=90 Identities=17% Similarity=0.049 Sum_probs=59.7
Q ss_pred CCccEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-------C
Q 023787 157 QHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------E 227 (277)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~ 227 (277)
++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++. .. ...|..+..+ .
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~--------------~v~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD--------------RLVNPLEEDLLEVVRRVT 228 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS--------------EEECTTTSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH--------------hccCcCccCHHHHHHHhc
Confidence 778999999863 7777777776544 799999998877776553 22 0112111000 0
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...+|+|+..-.- ...++.+.+.|+++|++++.-
T Consensus 229 ~~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 229 GSGVEVLLEFSGN--------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SSCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 2369999855431 146778888999999998763
No 364
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.36 E-value=0.16 Score=44.48 Aligned_cols=94 Identities=20% Similarity=0.153 Sum_probs=62.5
Q ss_pred CCCCccEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
..++.+||-+| .|.|..+..+++....+|+++|.++.-++.+++.-.. ..+...-.++. ..
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAK------------RGINYRSEDFAAVIKAET 232 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC------------EEEeCCchHHHHHHHHHh
Confidence 56788999995 4578888888876555799999999999988874322 11111111110 00
Q ss_pred CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.+.+|+|+.+-.- ..+..+.+.|++||++++.-
T Consensus 233 ~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 233 GQGVDIILDMIGA---------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp SSCEEEEEESCCG---------GGHHHHHHTEEEEEEEEECC
T ss_pred CCCceEEEECCCH---------HHHHHHHHHhccCCEEEEEE
Confidence 2469999865431 25667788999999998764
No 365
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.28 E-value=0.39 Score=43.69 Aligned_cols=97 Identities=11% Similarity=0.031 Sum_probs=63.5
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCC----------
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ---------- 222 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~---------- 222 (277)
..++.+||-+|+ |.|..+..+++....++++++.++.-++.+++.-.. ..+++...|..
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~---------~vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE---------AIIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC---------EEEETTTTTCCSEEETTEECH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc---------EEEecCcCcccccccccccch
Confidence 567889999997 578888888877666799999999999988764322 00110001110
Q ss_pred --------CCC--CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 223 --------DFT--PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 223 --------~~~--~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.+. .....+|+|+-+-. . ..+..+.+.|++||++++.-
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPG-------R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSC-------H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCC-------c--hhHHHHHHHhhCCcEEEEEe
Confidence 000 01247999885433 2 46777888999999998853
No 366
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.19 E-value=0.37 Score=42.12 Aligned_cols=93 Identities=8% Similarity=-0.060 Sum_probs=62.2
Q ss_pred CCCC--ccEEEeec--cccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023787 155 NNQH--LVALDCGS--GIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (277)
Q Consensus 155 ~~~~--~~VLDiGc--GtG~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (277)
..++ .+||-.|+ |.|..+..++..... +|+++|.++.-++.+++.+.. . ...|..+..
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~--------~-----~~~d~~~~~~~~~ 222 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF--------D-----AAINYKKDNVAEQ 222 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC--------S-----EEEETTTSCHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC--------c-----eEEecCchHHHHH
Confidence 4566 89999997 577777777766544 799999999888888764422 0 111222111
Q ss_pred ---CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 ---PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 ---~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...+.+|+|+.+-. . ..++.+.+.|++||++++.-
T Consensus 223 ~~~~~~~~~d~vi~~~G-------~--~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 223 LRESCPAGVDVYFDNVG-------G--NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHHCTTCEEEEEESCC-------H--HHHHHHHHTEEEEEEEEECC
T ss_pred HHHhcCCCCCEEEECCC-------H--HHHHHHHHHhccCcEEEEEC
Confidence 01126999986544 1 46788889999999998763
No 367
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.00 E-value=0.06 Score=46.22 Aligned_cols=56 Identities=11% Similarity=0.109 Sum_probs=39.6
Q ss_pred ceeEEEcCCCCC-C-CCCCceeEEecchhhhcCCh--------------h----hHHHHHHHHHhcCCCCcEEEEE
Q 023787 213 ATNFFCVPLQDF-T-PETGRYDVIWVQWCIGHLTD--------------D----DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 213 ~~~~~~~d~~~~-~-~~~~~fD~Vi~~~~l~~~~~--------------~----d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+..++++|..+. . .++++||+|+++-......+ + .+..+++++.++|||||.+++.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 467888887663 2 45679999998866532110 1 1356788999999999999875
No 368
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.91 E-value=0.12 Score=50.47 Aligned_cols=47 Identities=15% Similarity=0.098 Sum_probs=39.5
Q ss_pred CCCccEEEeeccccHHHHHHHHhC------CCcEEEEeCCHHHHHHHHHHhCC
Q 023787 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAP 202 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~------~~~v~gvD~S~~~l~~a~~~~~~ 202 (277)
.+..+|+|+=||.|.++.-+-..+ +.-+.++|+++.+++.-+.|+..
T Consensus 210 ~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~ 262 (784)
T 4ft4_B 210 TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ 262 (784)
T ss_dssp CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT
T ss_pred CCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC
Confidence 456799999999999999887665 55689999999999999888654
No 369
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.88 E-value=0.18 Score=43.89 Aligned_cols=61 Identities=11% Similarity=0.109 Sum_probs=45.7
Q ss_pred chHHHHHHHHhccCCCcCCCCCccEEEeeccccHHHHHHHHhCCCcEEEEeCCH---HHHHHHHHHhCCC
Q 023787 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPE 203 (277)
Q Consensus 137 ~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~---~~l~~a~~~~~~~ 203 (277)
-+..++..++... ..++..|||.-||+|..+......+ .+.+|+|+++ ..++.+++++...
T Consensus 227 kp~~l~~~~i~~~-----~~~~~~vlDpF~GsGtt~~aa~~~~-r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 227 KPAAVIERLVRAL-----SHPGSTVLDFFAGSGVTARVAIQEG-RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CCHHHHHHHHHHH-----SCTTCEEEETTCTTCHHHHHHHHHT-CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHh-----CCCCCEEEecCCCCCHHHHHHHHcC-CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 3455566655433 3477899999999999998766555 4699999999 9999999998653
No 370
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.86 E-value=0.16 Score=43.93 Aligned_cols=96 Identities=14% Similarity=0.057 Sum_probs=59.3
Q ss_pred CCCc-cEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCCCCce
Q 023787 156 NQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRY 231 (277)
Q Consensus 156 ~~~~-~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~f 231 (277)
.++. +||-+|+ |.|..+..+++....+|++++.++.-++.+++.-.. .-++....+.... ....+.+
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~~i~~~~~~~~~~~~~~~~~~ 217 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK---------EVLAREDVMAERIRPLDKQRW 217 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS---------EEEECC---------CCSCCE
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc---------EEEecCCcHHHHHHHhcCCcc
Confidence 3454 7999997 678888888876555799999998888888653211 1111111110000 1122479
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|+-+-. . ..+..+.+.|++||++++.-
T Consensus 218 d~vid~~g-------~--~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 218 AAAVDPVG-------G--RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEEEECST-------T--TTHHHHHHTEEEEEEEEECS
T ss_pred cEEEECCc-------H--HHHHHHHHhhccCCEEEEEe
Confidence 99885533 1 24667788999999998763
No 371
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.70 E-value=0.2 Score=43.94 Aligned_cols=89 Identities=20% Similarity=0.127 Sum_probs=57.4
Q ss_pred ccEEEeecc-ccHHH-HHHH-HhCCCc-EEEEeCCHH---HHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC----
Q 023787 159 LVALDCGSG-IGRIT-KNLL-IRYFNE-VDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---- 227 (277)
Q Consensus 159 ~~VLDiGcG-tG~~s-~~l~-~~~~~~-v~gvD~S~~---~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---- 227 (277)
.+||-+|+| .|..+ ..++ +....+ |+++|.++. -++.+++.-. +.. |..+..+.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa-------------~~v--~~~~~~~~~i~~ 238 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDA-------------TYV--DSRQTPVEDVPD 238 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTC-------------EEE--ETTTSCGGGHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCC-------------ccc--CCCccCHHHHHH
Confidence 899999985 46777 7777 544334 999999988 7888865321 111 21110000
Q ss_pred -CCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 228 -TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 228 -~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
.+.||+|+-+-.- . ..++.+.+.|+|||++++.-.
T Consensus 239 ~~gg~Dvvid~~g~------~--~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 239 VYEQMDFIYEATGF------P--KHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp HSCCEEEEEECSCC------H--HHHHHHHHHEEEEEEEEECCC
T ss_pred hCCCCCEEEECCCC------h--HHHHHHHHHHhcCCEEEEEeC
Confidence 1379999854321 1 467888899999999988643
No 372
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.54 E-value=0.44 Score=42.18 Aligned_cols=99 Identities=15% Similarity=0.045 Sum_probs=62.6
Q ss_pred CCCCccEEEeecc-ccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEE---EcCCC-CCC--C
Q 023787 155 NNQHLVALDCGSG-IGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF---CVPLQ-DFT--P 226 (277)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~---~~d~~-~~~--~ 226 (277)
..++.+||-+|+| .|..+..+++... .+|++++.|+.-++.+++.-.. .-++.. ..++. .+. .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~---------~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD---------LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS---------EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc---------EEEeccccCcchHHHHHHHHh
Confidence 4567899999976 4778888887655 4899999999999988753211 001100 00100 000 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
....+|+|+-+-.- . ..+..+.+.|+|||++++.-.
T Consensus 264 ~g~g~Dvvid~~g~------~--~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 264 HGRGADFILEATGD------S--RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TTSCEEEEEECSSC------T--THHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCcEEEECCCC------H--HHHHHHHHHHhcCCEEEEEec
Confidence 11369999854331 1 356778889999999987643
No 373
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.37 E-value=0.85 Score=39.52 Aligned_cols=98 Identities=17% Similarity=-0.016 Sum_probs=60.3
Q ss_pred CCCCccEEEeecccc-HHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-C--CCCC
Q 023787 155 NNQHLVALDCGSGIG-RITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T--PETG 229 (277)
Q Consensus 155 ~~~~~~VLDiGcGtG-~~s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--~~~~ 229 (277)
..++.+||-+|+|.+ ..+..+++. +..+|+++|.+++-++.+++.-.. .-+++...|..+. . ....
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~---------~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD---------VTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS---------EEEEC-CCCHHHHHHHHTTSS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe---------EEEeCCCCCHHHHhhhhcCCC
Confidence 457889999999864 445545543 456899999999988888765433 1122211111100 0 1123
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.+|.++....- . ..+..+.+.|+++|.+++.-
T Consensus 232 g~d~~~~~~~~------~--~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 232 GVQSAIVCAVA------R--IAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp CEEEEEECCSC------H--HHHHHHHHTEEEEEEEEECC
T ss_pred CceEEEEeccC------c--chhheeheeecCCceEEEEe
Confidence 56666643321 2 56788889999999998763
No 374
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.00 E-value=1.3 Score=38.29 Aligned_cols=95 Identities=14% Similarity=0.059 Sum_probs=61.1
Q ss_pred CCCCccEEEeeccc-cHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||-.|+|. |..+..+++.. ...++++|.++.-++.+++.-.. .. .|..+..
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~------------~~--i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM------------QT--FNSSEMSAPQMQSV 223 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS------------EE--EETTTSCHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCe------------EE--EeCCCCCHHHHHHh
Confidence 56788999999974 55566666554 44678999999999988775322 11 1111111
Q ss_pred -CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecC
Q 023787 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~ 271 (277)
.....+|+|+..-.. . ..++.+.+.|++||.+++.-..
T Consensus 224 ~~~~~g~d~v~d~~G~------~--~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 224 LRELRFNQLILETAGV------P--QTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp HGGGCSSEEEEECSCS------H--HHHHHHHHHCCTTCEEEECCCC
T ss_pred hcccCCcccccccccc------c--chhhhhhheecCCeEEEEEecc
Confidence 112357877644321 1 5677888999999999986443
No 375
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=91.94 E-value=0.18 Score=43.68 Aligned_cols=96 Identities=13% Similarity=0.014 Sum_probs=60.4
Q ss_pred CCCc-cEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-CCCCCce
Q 023787 156 NQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRY 231 (277)
Q Consensus 156 ~~~~-~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~f 231 (277)
.++. +||-+|+ |.|..+..+++....+|++++.++.-++.+++.-.. ..++....+.... ....+.+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~v~~~~~~~~~~~~~~~~~~~ 218 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS---------EVISREDVYDGTLKALSKQQW 218 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCS---------EEEEHHHHCSSCCCSSCCCCE
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---------EEEECCCchHHHHHHhhcCCc
Confidence 3454 8999997 577888777765444699999998888888764221 1111111111111 1122469
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|+-+-. . ..+..+.+.|++||++++.-
T Consensus 219 d~vid~~g-------~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 219 QGAVDPVG-------G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEEESCC-------T--HHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCc-------H--HHHHHHHHhhcCCCEEEEEe
Confidence 99885433 2 35778889999999998763
No 376
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=91.82 E-value=0.04 Score=47.26 Aligned_cols=93 Identities=13% Similarity=-0.046 Sum_probs=60.0
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE-cCCCCCCCCCCce
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRY 231 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~f 231 (277)
..++.+||-+|+ |.|..+..+++....+|++++.++.-++.+++.-.. ..++... .++.+. . +.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~---------~~~~~~~~~~~~~~-~--~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE---------EAATYAEVPERAKA-W--GGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCS---------EEEEGGGHHHHHHH-T--TSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC---------EEEECCcchhHHHH-h--cCc
Confidence 346789999997 578888888776555899999999888888653111 0011000 111000 1 469
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
|+|+. -. . ..++.+.+.|+++|++++.-
T Consensus 191 d~vid-~g-------~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 191 DLVLE-VR-------G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEEEE-CS-------C--TTHHHHHTTEEEEEEEEEC-
T ss_pred eEEEE-CC-------H--HHHHHHHHhhccCCEEEEEe
Confidence 99986 32 1 25677888999999998753
No 377
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.67 E-value=0.08 Score=46.63 Aligned_cols=96 Identities=19% Similarity=0.070 Sum_probs=60.5
Q ss_pred CCCCccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCC-CC--CCCCCc
Q 023787 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ-DF--TPETGR 230 (277)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~-~~--~~~~~~ 230 (277)
..++.+||-+|+| .|..+..+++....+|+++|.|+.-++.+++.-.. ..+...-. ++ ... +.
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD------------HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS------------EEEEGGGTSCHHHHSC-SC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCC------------EEEcCcCchHHHHHhh-cC
Confidence 5578899999986 47777777765444699999999988888764221 11111000 11 011 47
Q ss_pred eeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 231 fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+|+|+.+-.-. + ...++.+.+.|+|||++++.-
T Consensus 244 ~D~vid~~g~~--~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 244 FDLIVVCASSL--T----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEEECCSCS--T----TCCTTTGGGGEEEEEEEEECC
T ss_pred CCEEEECCCCC--c----HHHHHHHHHHhcCCCEEEEec
Confidence 99998554320 0 023455678899999998753
No 378
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.33 E-value=0.77 Score=39.95 Aligned_cols=90 Identities=12% Similarity=0.126 Sum_probs=60.2
Q ss_pred CCccEEEee-cc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC-CC-----CCC
Q 023787 157 QHLVALDCG-SG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT-----PET 228 (277)
Q Consensus 157 ~~~~VLDiG-cG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~-----~~~ 228 (277)
++.+||-+| +| .|..+..+++....+|++++.++.-++.+++.-... . .+..+ +. ...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~------------v--i~~~~~~~~~~~~~~~ 215 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADI------------V--LNHKESLLNQFKTQGI 215 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSE------------E--ECTTSCHHHHHHHHTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcE------------E--EECCccHHHHHHHhCC
Confidence 678999994 44 677888787765558999999999999988743220 0 11111 00 112
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+.+|+|+-+-. -...+..+.+.|+|||+++..
T Consensus 216 ~g~Dvv~d~~g--------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 216 ELVDYVFCTFN--------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp CCEEEEEESSC--------HHHHHHHHHHHEEEEEEEEES
T ss_pred CCccEEEECCC--------chHHHHHHHHHhccCCEEEEE
Confidence 47999986432 125678888999999999764
No 379
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.91 E-value=0.57 Score=42.37 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=63.3
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (277)
..++.+||-.|+ |.|..+..+++....++++++.++.-++.+++.-.. ..++....++.+..
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~~i~~~~~~~~~~~~~~~~~~ 288 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCD---------LVINRAELGITDDIADDPRRV 288 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC---------CEEEHHHHTCCTTGGGCHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC---------EEEeccccccccccccccccc
Confidence 567889999997 568888888877666799999999999988653211 11111111221100
Q ss_pred -------------CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 -------------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -------------~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.....+|+|+-+-. . ..++.+.+.|++||.+++.-
T Consensus 289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G-------~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 289 VETGRKLAKLVVEKAGREPDIVFEHTG-------R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHSSCCSEEEECSC-------H--HHHHHHHHHSCTTCEEEESC
T ss_pred chhhhHHHHHHHHHhCCCceEEEECCC-------c--hHHHHHHHHHhcCCEEEEEe
Confidence 00246899885443 1 35677788999999998864
No 380
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=90.80 E-value=0.49 Score=41.55 Aligned_cols=88 Identities=20% Similarity=0.135 Sum_probs=57.0
Q ss_pred CccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCH---HHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCC------
Q 023787 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (277)
Q Consensus 158 ~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~---~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------ 227 (277)
+.+||-+|+| .|..+..+++....+|+++|.++ .-++.+++.-. +.. | .+ .+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga-------------~~v--~-~~-~~~~~~~~~ 243 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKT-------------NYY--N-SS-NGYDKLKDS 243 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTC-------------EEE--E-CT-TCSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCC-------------cee--c-hH-HHHHHHHHh
Confidence 7899999985 35566666654333799999987 77777765321 111 2 21 111
Q ss_pred CCceeEEecchhhhcCChhhHHHHH-HHHHhcCCCCcEEEEEec
Q 023787 228 TGRYDVIWVQWCIGHLTDDDFVSFF-KRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~~~~d~~~~l-~~~~r~LkpGG~lii~e~ 270 (277)
.+.+|+|+.+-.. + ..+ +.+.+.|++||++++.-.
T Consensus 244 ~~~~d~vid~~g~---~-----~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 244 VGKFDVIIDATGA---D-----VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp HCCEEEEEECCCC---C-----THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCCCEEEECCCC---h-----HHHHHHHHHHHhcCCEEEEEec
Confidence 1469999865432 1 245 788899999999987643
No 381
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.70 E-value=0.46 Score=41.35 Aligned_cols=91 Identities=13% Similarity=0.074 Sum_probs=61.7
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (277)
..++.+||-+|+ |.|..+..+++....+|+++ .++.-++.+++.-.. .+. .-.++. .
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~-------------~i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGAT-------------PID-ASREPEDYAAEHT 212 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSE-------------EEE-TTSCHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCC-------------Eec-cCCCHHHHHHHHh
Confidence 567889999994 56888888887655579999 888888888764221 111 111111 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
....+|+|+-+-. . ..+..+.+.|+++|.+++.-
T Consensus 213 ~~~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 213 AGQGFDLVYDTLG-------G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp TTSCEEEEEESSC-------T--HHHHHHHHHEEEEEEEEESC
T ss_pred cCCCceEEEECCC-------c--HHHHHHHHHHhcCCeEEEEc
Confidence 1247999985433 1 46777888999999998753
No 382
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.60 E-value=1.8 Score=33.68 Aligned_cols=92 Identities=15% Similarity=-0.017 Sum_probs=53.1
Q ss_pred CccEEEeeccc-cHH-HHHHHHh-CCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----C-CCC
Q 023787 158 HLVALDCGSGI-GRI-TKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----P-ETG 229 (277)
Q Consensus 158 ~~~VLDiGcGt-G~~-s~~l~~~-~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~-~~~ 229 (277)
+.+|+=+|||. |.. +..|.+. +. .|+++|.++..++.+++. .+..+.+|..+.. . .-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~-------------g~~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE-------------GRNVISGDATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT-------------TCCEEECCTTCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC-------------CCCEEEcCCCCHHHHHhccCCC
Confidence 46899999873 433 3333444 55 599999999888776642 1234455554321 1 124
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.+|+|+.... +......+-...+.+.|++.++..
T Consensus 105 ~ad~vi~~~~-----~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 105 HVKLVLLAMP-----HHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CCCEEEECCS-----SHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEeCC-----ChHHHHHHHHHHHHHCCCCEEEEE
Confidence 6898886432 112223333455667777777764
No 383
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=90.55 E-value=1.8 Score=37.80 Aligned_cols=115 Identities=12% Similarity=0.087 Sum_probs=73.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHhCCC--------------CCC--CC-CCCcceeEE
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPE--------------NHM--AP-DMHKATNFF 217 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~a~~~~~~~--------------~~~--~~-~~~~~~~~~ 217 (277)
+...|+-+|||-=.....+..... ..++=||. |..++.=++.+... ... +. ....+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 456899999998777776765432 25777776 44444322222210 000 00 012456778
Q ss_pred EcCCCCC----------CCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 218 CVPLQDF----------TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 218 ~~d~~~~----------~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
.+|+.+. .+....-=++++-.++.|++.++...+|+.+.+.. |+|.+++-|.+.+
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p 233 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNM 233 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCT
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCC
Confidence 8888763 13334556888889999999999999999999876 5666667787754
No 384
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.55 E-value=0.99 Score=38.75 Aligned_cols=92 Identities=15% Similarity=-0.014 Sum_probs=58.1
Q ss_pred CCCCccEEEee-c-cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC-CCCCCCce
Q 023787 155 NNQHLVALDCG-S-GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRY 231 (277)
Q Consensus 155 ~~~~~~VLDiG-c-GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~f 231 (277)
..++.+||-+| + |.|..+..+++....+|++++ ++.-++.+++.-.. ..+...-.+ +...-..+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~------------~~i~~~~~~~~~~~~~g~ 216 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAE------------QCINYHEEDFLLAISTPV 216 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCS------------EEEETTTSCHHHHCCSCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCC------------EEEeCCCcchhhhhccCC
Confidence 56788999997 4 468888888877555798887 55557777664222 111111111 11011469
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
|+|+-+-. . ..+..+.+.|++||+++..
T Consensus 217 D~v~d~~g-------~--~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVG-------G--DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSC-------H--HHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCC-------c--HHHHHHHHhccCCCEEEEe
Confidence 99985433 1 2337788999999999875
No 385
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.49 E-value=0.24 Score=47.43 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=64.1
Q ss_pred CCccEEEeeccccHHHHHHHHhC----------C-C--cEEEEeC---CHHHHHHHHHHhCC-----------CC--CCC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRY----------F-N--EVDLLEP---VSHFLDAARESLAP-----------EN--HMA 207 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~----------~-~--~v~gvD~---S~~~l~~a~~~~~~-----------~~--~~~ 207 (277)
+..+|||+|-|+|......+... . . +++.+|. +++.+..+-..... .. +.+
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 45799999999999877665542 1 1 5899998 77777644332110 00 000
Q ss_pred C------CCCcceeEEEcCCCCCC--CC---CCceeEEecchh-hhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 208 P------DMHKATNFFCVPLQDFT--PE---TGRYDVIWVQWC-IGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 208 ~------~~~~~~~~~~~d~~~~~--~~---~~~fD~Vi~~~~-l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
. .....++...+|+.+.- .. ...||+|+.-.. -..-|+-=-..+|+.++++++|||.+.-
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 0 00123445555654321 11 367999986432 1111110024789999999999999764
No 386
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.02 E-value=1 Score=37.23 Aligned_cols=101 Identities=17% Similarity=0.211 Sum_probs=65.4
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-------
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 226 (277)
.++++|-.|++.|. ++..|++.+. +|++++.++..++...+.+. .++.++.+|+.+...
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~ 75 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG----------PRVHALRSDIADLNEIAVLGAA 75 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG----------GGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC----------CcceEEEccCCCHHHHHHHHHH
Confidence 45678888876653 4445555566 59999999988877766652 357888899887431
Q ss_pred ---CCCceeEEecchhh------hcCChhhHHH-----------HHHHHHhcCCCCcEEEEE
Q 023787 227 ---ETGRYDVIWVQWCI------GHLTDDDFVS-----------FFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 227 ---~~~~fD~Vi~~~~l------~~~~~~d~~~-----------~l~~~~r~LkpGG~lii~ 268 (277)
.-+..|+++.+-.+ ...+.+++.. +.+.+...++++|.+++.
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 76 AGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp HHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 01478999865432 2334444333 345566667778888775
No 387
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.99 E-value=2.1 Score=36.76 Aligned_cols=89 Identities=13% Similarity=0.013 Sum_probs=57.5
Q ss_pred CccEEEeeccc--cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC-CCCCCCceeE
Q 023787 158 HLVALDCGSGI--GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYDV 233 (277)
Q Consensus 158 ~~~VLDiGcGt--G~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~ 233 (277)
..+|.=||+|. |.++..+.+.+.. +|+++|.++..++.+++.-. +.-...+..+ .. ...|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~------------~~~~~~~~~~~~~---~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI------------IDEGTTSIAKVED---FSPDF 97 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS------------CSEEESCTTGGGG---GCCSE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC------------cchhcCCHHHHhh---ccCCE
Confidence 36899999884 3455556656653 69999999988887765311 1112233332 11 35798
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
|+.+-. ......+++++...++||.+++
T Consensus 98 Vilavp-----~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 98 VMLSSP-----VRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp EEECSC-----GGGHHHHHHHHHHHSCTTCEEE
T ss_pred EEEeCC-----HHHHHHHHHHHhhccCCCcEEE
Confidence 886644 3345678899999999987654
No 388
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=89.84 E-value=0.38 Score=43.49 Aligned_cols=44 Identities=20% Similarity=0.438 Sum_probs=35.7
Q ss_pred CccEEEeeccccHHHHHHHHhC------CCcEEEEeCCHHHHHHHHHHhC
Q 023787 158 HLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLA 201 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~------~~~v~gvD~S~~~l~~a~~~~~ 201 (277)
+.+|+|+|.|+|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 4799999999999988887542 2379999999998887777764
No 389
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.73 E-value=4.1 Score=29.50 Aligned_cols=90 Identities=9% Similarity=0.000 Sum_probs=49.5
Q ss_pred CccEEEeeccc-cHH-HHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023787 158 HLVALDCGSGI-GRI-TKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (277)
Q Consensus 158 ~~~VLDiGcGt-G~~-s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (277)
+++|+=+|+|. |.. +..|.+.+. +|+++|.++..++..++... +.++.+|..+.. .....+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~------------~~~~~~d~~~~~~l~~~~~~~~ 70 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEID------------ALVINGDCTKIKTLEDAGIEDA 70 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCS------------SEEEESCTTSHHHHHHTTTTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcC------------cEEEEcCCCCHHHHHHcCcccC
Confidence 36789898863 222 222333343 69999999987776654321 234455544321 112368
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEE
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFF 265 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~l 265 (277)
|+|+..-.. ......+..+.+.+.++-++
T Consensus 71 d~vi~~~~~-----~~~~~~~~~~~~~~~~~~ii 99 (140)
T 1lss_A 71 DMYIAVTGK-----EEVNLMSSLLAKSYGINKTI 99 (140)
T ss_dssp SEEEECCSC-----HHHHHHHHHHHHHTTCCCEE
T ss_pred CEEEEeeCC-----chHHHHHHHHHHHcCCCEEE
Confidence 988876321 22334555566667776433
No 390
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.60 E-value=0.34 Score=46.52 Aligned_cols=111 Identities=15% Similarity=0.076 Sum_probs=64.4
Q ss_pred CCccEEEeeccccHHHHHHHHhC----------C---CcEEEEeC---CHHHHHHHHHH-----------hCCCCCC--C
Q 023787 157 QHLVALDCGSGIGRITKNLLIRY----------F---NEVDLLEP---VSHFLDAARES-----------LAPENHM--A 207 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~----------~---~~v~gvD~---S~~~l~~a~~~-----------~~~~~~~--~ 207 (277)
+..+|+|+|.|+|.....+++.. . -+++.+|. +...+..+-.. +...... +
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 55799999999999887766542 1 16899998 55555443221 1110000 0
Q ss_pred ------CCCCcceeEEEcCCCCCC--CC---CCceeEEecchh-hhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 208 ------PDMHKATNFFCVPLQDFT--PE---TGRYDVIWVQWC-IGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 208 ------~~~~~~~~~~~~d~~~~~--~~---~~~fD~Vi~~~~-l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
......+++..+|+.+.. .. .+.||.++.-.. -...++-=-..++..+.++++|||.+.-
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 000235666677765432 11 368999986432 1121210124799999999999998763
No 391
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.56 E-value=1.7 Score=39.02 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=59.3
Q ss_pred CccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCCCcee
Q 023787 158 HLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYD 232 (277)
Q Consensus 158 ~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD 232 (277)
..+|+=+|+|. |......+......|+++|.++..++.+++. ...++.+|..+.. ..-...|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-------------g~~vi~GDat~~~~L~~agi~~A~ 70 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-------------GMKVFYGDATRMDLLESAGAAKAE 70 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-------------TCCCEESCTTCHHHHHHTTTTTCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-------------CCeEEEcCCCCHHHHHhcCCCccC
Confidence 45799999874 3333333333333599999999999988753 1345677877642 2224688
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+|++... ++.....+....+.+.|...++..
T Consensus 71 ~viv~~~-----~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 71 VLINAID-----DPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp EEEECCS-----SHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EEEECCC-----ChHHHHHHHHHHHHhCCCCeEEEE
Confidence 8876543 224445666677778888777764
No 392
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.54 E-value=0.16 Score=44.22 Aligned_cols=57 Identities=19% Similarity=0.197 Sum_probs=40.3
Q ss_pred cceeEEEcCCCC-CC-CCCCceeEEecchhhhcCC------------hhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 212 KATNFFCVPLQD-FT-PETGRYDVIWVQWCIGHLT------------DDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 212 ~~~~~~~~d~~~-~~-~~~~~fD~Vi~~~~l~~~~------------~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
....++++|..+ +. .++++||+|++........ ...+...+.++.++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 356778887654 22 4567999999876543211 014668899999999999999885
No 393
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.52 E-value=0.48 Score=41.75 Aligned_cols=94 Identities=13% Similarity=0.058 Sum_probs=57.0
Q ss_pred CCCCccEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC---CCCC
Q 023787 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (277)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~ 229 (277)
..++.+||-+| .|.|..+..+++....+|++++ ++.-++.+++.-.. ..+...-.++. ....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~v~~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGAD------------DVIDYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS------------EEEETTSSCHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCC------------EEEECCchHHHHHHhhcC
Confidence 45678999999 3578888888876555799988 66777777543111 01111101100 0113
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.+|+|+-+-.-. . ..+....+.|++||++++.
T Consensus 248 g~D~vid~~g~~-----~--~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 248 PFDFILDNVGGS-----T--ETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CBSEEEESSCTT-----H--HHHGGGGBCSSSCCEEEES
T ss_pred CCCEEEECCCCh-----h--hhhHHHHHhhcCCcEEEEe
Confidence 689988543311 1 2456777899999999875
No 394
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=89.35 E-value=0.84 Score=47.05 Aligned_cols=46 Identities=20% Similarity=0.099 Sum_probs=39.8
Q ss_pred CCccEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAP 202 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~ 202 (277)
...+++|+=||.|.++..+...++ .-+.++|+++.+++.-+.++..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~ 896 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPG 896 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTT
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC
Confidence 457899999999999999888886 4689999999999988888654
No 395
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=89.14 E-value=4.3 Score=35.78 Aligned_cols=99 Identities=10% Similarity=-0.006 Sum_probs=65.6
Q ss_pred CCccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
.+.+||.++.+.|.++..++.. .++.+.-|--.....+.++..+++. ...+.+... +... .+.||+|+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~----~~~~~~~~~-~~~~---~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGID----ESSVKFLDS-TADY---PQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCC----GGGSEEEET-TSCC---CSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCC----ccceEeccc-cccc---ccCCCEEEE
Confidence 3468999999999999877643 3455544655556667777665542 123444322 2222 367999887
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...= + ...+...|..+...|+||+.+++..
T Consensus 107 ~lpk-~--~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 107 KVPK-T--LALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp ECCS-C--HHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred EcCC-C--HHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 5542 1 2357788999999999999998763
No 396
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.45 E-value=4.1 Score=29.95 Aligned_cols=90 Identities=11% Similarity=0.101 Sum_probs=51.3
Q ss_pred CccEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023787 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (277)
Q Consensus 158 ~~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (277)
..+|+-+|||. |. ++..|.+.+. +|+++|.++..++.+++. ...++.+|..+.. ..-..+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-------------~~~~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-------------GFDAVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------------TCEEEECCTTCHHHHHHSCCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-------------CCcEEECCCCCHHHHHhCCcccC
Confidence 35799999964 32 2333333455 599999999988877652 1455667776532 122468
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
|+|+.... +.+....+....+.+. ...++.
T Consensus 72 d~vi~~~~-----~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 72 SAVLITGS-----DDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp SEEEECCS-----CHHHHHHHHHHHHHHC-CCCEEE
T ss_pred CEEEEecC-----CHHHHHHHHHHHHHhC-CceEEE
Confidence 88876544 1122233344444455 444444
No 397
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.40 E-value=2.6 Score=35.02 Aligned_cols=93 Identities=9% Similarity=-0.059 Sum_probs=56.2
Q ss_pred ccEEEeeccccHHHHHHHHhC---CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 159 LVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~---~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
++||=.|| |.++..+++.. ..+|++++-++.-.+.... .+++++.+|+.++. -..+|+|+
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------------~~~~~~~~D~~d~~--~~~~d~vi 68 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------------SGAEPLLWPGEEPS--LDGVTHLL 68 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------------TTEEEEESSSSCCC--CTTCCEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------------CCCeEEEecccccc--cCCCCEEE
Confidence 58999995 77777666542 2269999988765544332 24788889998866 35789998
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
...............+++.+.+.-..-+.|++.
T Consensus 69 ~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 69 ISTAPDSGGDPVLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp ECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred ECCCccccccHHHHHHHHHHHhhcCCceEEEEe
Confidence 766543332222334555444431222455543
No 398
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=88.27 E-value=0.3 Score=43.05 Aligned_cols=92 Identities=15% Similarity=0.106 Sum_probs=57.9
Q ss_pred CCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC---CCCCCCcee
Q 023787 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD---FTPETGRYD 232 (277)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~fD 232 (277)
++.+||-+|+|. |..+..+++....+|++++.++.-++.+++.+... ..+ |..+ +....+.+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~-----------~v~--~~~~~~~~~~~~~~~D 253 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD-----------SFL--VSRDQEQMQAAAGTLD 253 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS-----------EEE--ETTCHHHHHHTTTCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc-----------eEE--eccCHHHHHHhhCCCC
Confidence 678999999863 66777777665457999999998888777554321 011 1111 000013699
Q ss_pred EEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 233 ~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+|+.+-... ..++.+.+.|++||+++..-
T Consensus 254 ~vid~~g~~--------~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 254 GIIDTVSAV--------HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEECCSSC--------CCSHHHHHHEEEEEEEEECC
T ss_pred EEEECCCcH--------HHHHHHHHHHhcCCEEEEEc
Confidence 998654321 13445667889999988763
No 399
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.09 E-value=1.9 Score=37.77 Aligned_cols=93 Identities=13% Similarity=0.026 Sum_probs=59.1
Q ss_pred CCCccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CCC
Q 023787 156 NQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PET 228 (277)
Q Consensus 156 ~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~ 228 (277)
.++.+||-+|+ |.|..+..+++....+|+++. |+.-++.+++.-.. ..+...-.++. ...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~t~ 229 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAE------------EVFDYRAPNLAQTIRTYTK 229 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS------------EEEETTSTTHHHHHHHHTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCc------------EEEECCCchHHHHHHHHcc
Confidence 57789999998 378888888877555788885 88888877664221 11111111110 112
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcC-CCCcEEEEEe
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGL-KPGGFFVLKE 269 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~L-kpGG~lii~e 269 (277)
+.+|+|+-+-.- . ..+..+.+.| ++||++++.-
T Consensus 230 g~~d~v~d~~g~------~--~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 230 NNLRYALDCITN------V--ESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp TCCCEEEESSCS------H--HHHHHHHHHSCTTCEEEEESS
T ss_pred CCccEEEECCCc------h--HHHHHHHHHhhcCCCEEEEEe
Confidence 459998854331 1 4567777888 6999998753
No 400
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.09 E-value=1.7 Score=36.23 Aligned_cols=104 Identities=20% Similarity=0.160 Sum_probs=64.2
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCC------------HHHHHHHHHHhCCCCCCCCCCCcceeEEEcCC
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S------------~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (277)
.+.+||-.|++.|. ++..|++.+. +|+++|.+ ..-++.+...+... ..++.++.+|+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~ 80 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-------GRKAYTAEVDV 80 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-------TSCEEEEECCT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhc-------CCceEEEEccC
Confidence 45678888876653 4455555565 59999987 66666655544332 24578888998
Q ss_pred CCCCC-----C-----CCceeEEecchhhhc----CChhhHHH-----------HHHHHHhcCCCCcEEEEE
Q 023787 222 QDFTP-----E-----TGRYDVIWVQWCIGH----LTDDDFVS-----------FFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 222 ~~~~~-----~-----~~~fD~Vi~~~~l~~----~~~~d~~~-----------~l~~~~r~LkpGG~lii~ 268 (277)
.+... . -+..|++|.+-.+.. .+.+++.. +++.+...++.+|.+++.
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 87430 0 136899986654322 33333333 346677777888888765
No 401
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.06 E-value=2 Score=36.30 Aligned_cols=104 Identities=15% Similarity=0.053 Sum_probs=64.0
Q ss_pred CCccEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023787 157 QHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (277)
Q Consensus 157 ~~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (277)
.++++|-.|++ .|. ++..|++.+. +|+.++.++...+.+++.... ..++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~ 100 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEE--------LGAFVAGHCDVADAASIDAVF 100 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHH--------HTCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHh--------cCCceEEECCCCCHHHHHHHH
Confidence 45689999976 343 4555666666 599999987655554444332 124678888988742 0
Q ss_pred -----CCCceeEEecchhhh----------cCChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023787 227 -----ETGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 -----~~~~fD~Vi~~~~l~----------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e 269 (277)
.-++.|++|.+-.+. ..+.+++. .+++.+...++.+|.+++.-
T Consensus 101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 014789998664332 23333332 34556677778889888763
No 402
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=87.72 E-value=0.99 Score=40.47 Aligned_cols=45 Identities=16% Similarity=0.002 Sum_probs=38.3
Q ss_pred CccEEEeeccccHHHHHHHHhC--CCc----EEEEeCCHHHHHHHHHHhCC
Q 023787 158 HLVALDCGSGIGRITKNLLIRY--FNE----VDLLEPVSHFLDAARESLAP 202 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~--~~~----v~gvD~S~~~l~~a~~~~~~ 202 (277)
..+|+|+=||.|..+..+...+ +.- |.++|+++.+++.-+.++..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 4699999999999999888776 344 88899999999988888865
No 403
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=87.51 E-value=0.18 Score=44.33 Aligned_cols=94 Identities=13% Similarity=0.066 Sum_probs=57.8
Q ss_pred CCccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEc-CCCCCCCCCCceeEE
Q 023787 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD~V 234 (277)
++.+||-+|+| .|..+..+++....+|+++|.++.-++.+++.+... ..++.... .+.+. .+.+|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~--------~vi~~~~~~~~~~~---~~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGAD--------DYVIGSDQAKMSEL---ADSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCS--------CEEETTCHHHHHHS---TTTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCc--------eeeccccHHHHHHh---cCCCCEE
Confidence 67899999987 466777777654447999999988888777444321 10110000 00111 1369999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+-+-.-. ..+..+.+.|+|||++++.-
T Consensus 249 id~~g~~--------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 249 IDTVPVH--------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EECCCSC--------CCSHHHHTTEEEEEEEEECS
T ss_pred EECCCCh--------HHHHHHHHHhccCCEEEEeC
Confidence 8543311 23455678999999998764
No 404
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=85.38 E-value=6.6 Score=29.33 Aligned_cols=93 Identities=14% Similarity=0.113 Sum_probs=54.3
Q ss_pred CccEEEeeccccHHHHHHHH----hCCCcEEEEeCC-HHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCC
Q 023787 158 HLVALDCGSGIGRITKNLLI----RYFNEVDLLEPV-SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PET 228 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~----~~~~~v~gvD~S-~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~ 228 (277)
..+|+=+||| ..+..+++ .+. .|+++|.+ +...+...+.... .+.++.+|..+.. ..-
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~----------~~~~i~gd~~~~~~l~~a~i 69 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGD----------NADVIPGDSNDSSVLKKAGI 69 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCT----------TCEEEESCTTSHHHHHHHTT
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcC----------CCeEEEcCCCCHHHHHHcCh
Confidence 3578888875 44444433 344 59999997 4555444443321 2567778876532 112
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
...|+|++... ++.....+....+.+.|...++..
T Consensus 70 ~~ad~vi~~~~-----~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 70 DRCRAILALSD-----NDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp TTCSEEEECSS-----CHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred hhCCEEEEecC-----ChHHHHHHHHHHHHHCCCCEEEEE
Confidence 46788876643 123345566667777777776654
No 405
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=84.56 E-value=4.9 Score=33.06 Aligned_cols=106 Identities=13% Similarity=0.083 Sum_probs=65.8
Q ss_pred CCccEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-----
Q 023787 157 QHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----- 226 (277)
Q Consensus 157 ~~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----- 226 (277)
.+.++|-.|++ .|. ++..|++.+. +|++++.+....+.+.+.....+ ..++.++.+|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLD------RNDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSS------SCCCEEEECCCSSSHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcC------CCCceEEeCCCCCHHHHHHHH
Confidence 45688999976 343 4555666666 59999888765555555443321 1257888999987530
Q ss_pred C-----CCceeEEecchhhh----------cCChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023787 227 E-----TGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~-----~~~fD~Vi~~~~l~----------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e 269 (277)
. -+.+|+++.+-.+. ..+.+++. .+++.+...++++|.+++.-
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 0 13689888654332 23333333 25567777888889888764
No 406
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=84.56 E-value=0.33 Score=42.83 Aligned_cols=100 Identities=8% Similarity=0.041 Sum_probs=54.7
Q ss_pred CCccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
++.+|+=+|+| .|..+..++.....+|+++|.++.-++.+++.... .+.....+..++...-..+|+|+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----------RVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----------GSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc----------eeEeeeCCHHHHHHHHcCCCEEE
Confidence 34799999986 34444444444333799999999988888766532 11111111111100002589998
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.+-.....+... -+.+...+.++|||+++..
T Consensus 236 ~~~~~~~~~~~~--li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 236 GAVLVPGRRAPI--LVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp ECCCCTTSSCCC--CBCHHHHTTSCTTCEEEET
T ss_pred ECCCcCCCCCCe--ecCHHHHhhCCCCCEEEEE
Confidence 654332211001 1134456788999987764
No 407
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=84.07 E-value=4.1 Score=34.28 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=62.5
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHH-HHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSH-FLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
.+++||-.|++.|. ++..|++.+. +|++++.+.. ..+...+..... ..++.++.+|+.+.. +.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKE-------GVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTT-------TCCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHH
Confidence 45678888876653 4445555565 5999988754 344444433332 245788889988742 00
Q ss_pred -----CCceeEEecchh-------hhcCChhhHH-----------HHHHHHHhcCCCCcEEEEE
Q 023787 228 -----TGRYDVIWVQWC-------IGHLTDDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 228 -----~~~fD~Vi~~~~-------l~~~~~~d~~-----------~~l~~~~r~LkpGG~lii~ 268 (277)
-+..|+++.+-. +..++.+++. .+++.+...++.+|.+++.
T Consensus 118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 136899986533 2223444433 3456677778888988775
No 408
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.02 E-value=0.46 Score=42.17 Aligned_cols=99 Identities=14% Similarity=0.086 Sum_probs=54.3
Q ss_pred CCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEE-EcCCCCCCCCCCceeEE
Q 023787 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF-CVPLQDFTPETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~fD~V 234 (277)
++.+|+=+|+|. |......+.....+|+++|.++.-++.+++.+... ...... ..++.+. -..+|+|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~--------~~~~~~~~~~l~~~---l~~aDvV 235 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR--------IHTRYSSAYELEGA---VKRADLV 235 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS--------SEEEECCHHHHHHH---HHHCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCe--------eEeccCCHHHHHHH---HcCCCEE
Confidence 568999999963 44444444443337999999999888887654321 000000 0011110 0257998
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+.+-......... -+.+++.+.+||||+++..
T Consensus 236 i~~~~~p~~~t~~--li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 236 IGAVLVPGAKAPK--LVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp EECCCCTTSCCCC--CBCHHHHTTSCTTCEEEEG
T ss_pred EECCCcCCCCCcc--eecHHHHhcCCCCcEEEEE
Confidence 8643211101001 1235566789999988764
No 409
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.91 E-value=6.5 Score=32.40 Aligned_cols=89 Identities=12% Similarity=0.159 Sum_probs=54.7
Q ss_pred CccEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 158 ~~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
..+|.=||||. |. ++..+...+...|.++|.+++.++.+.+.+. +.. ..+..+.. ...|+|+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g------------~~~-~~~~~~~~---~~~Dvvi 73 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE------------AEY-TTDLAEVN---PYAKLYI 73 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT------------CEE-ESCGGGSC---SCCSEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC------------Cce-eCCHHHHh---cCCCEEE
Confidence 35799999983 32 3444455555448999999988877766532 111 22332221 2579888
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
.+-.- .....++..+...+++|..++-
T Consensus 74 ~av~~-----~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 74 VSLKD-----SAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp ECCCH-----HHHHHHHHHHHTTCCTTCEEEE
T ss_pred EecCH-----HHHHHHHHHHHhhcCCCcEEEE
Confidence 66442 2345778888888888776554
No 410
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=83.88 E-value=1.5 Score=38.07 Aligned_cols=91 Identities=5% Similarity=-0.060 Sum_probs=54.2
Q ss_pred ccEEEe-ec-cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------CCCCc
Q 023787 159 LVALDC-GS-GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PETGR 230 (277)
Q Consensus 159 ~~VLDi-Gc-GtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~ 230 (277)
.+||=. |+ |.|..+..+++....+|++++.++.-++.+++.-.. ..+...-.++. .....
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAA------------HVLNEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCS------------EEEETTSTTHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEEECCcHHHHHHHHHHhcCCC
Confidence 456544 33 356677767665444799999999988888764221 11111111110 00126
Q ss_pred eeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 231 fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
+|+|+-+-.- ..+..+.+.|++||++++.-.
T Consensus 234 ~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 234 PRIFLDAVTG---------PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp CCEEEESSCH---------HHHHHHHHHSCTTCEEEECCC
T ss_pred CcEEEECCCC---------hhHHHHHhhhcCCCEEEEEec
Confidence 8998854431 234667889999999998743
No 411
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=83.58 E-value=0.48 Score=41.87 Aligned_cols=100 Identities=10% Similarity=0.041 Sum_probs=53.3
Q ss_pred CCccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
++.+|+=+|+| .|......+.....+|+++|.++.-++.+++.+.. .+.....+..++...-..+|+|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~----------~~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG----------RVITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----------SEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc----------eEEEecCCHHHHHHHHhCCCEEE
Confidence 45799999986 34444444444333799999999888777664422 11111111111100002579888
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.+-...... ...-+.+++.+.+||||.++..
T Consensus 235 ~~~g~~~~~--~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 235 GAVLVPGAK--APKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ECCC---------CCSCHHHHTTSCTTCEEEEC
T ss_pred ECCCCCccc--cchhHHHHHHHhhcCCCEEEEE
Confidence 654432100 0011245677788999988764
No 412
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=83.24 E-value=2.4 Score=36.97 Aligned_cols=45 Identities=22% Similarity=0.116 Sum_probs=34.4
Q ss_pred CCCCccEEEeecc-ccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHH
Q 023787 155 NNQHLVALDCGSG-IGRITKNLLIRY-FNEVDLLEPVSHFLDAARES 199 (277)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~ 199 (277)
..++.+||-+|+| .|..+..+++.. ..+|+++|.|+.-++.+++.
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l 230 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL 230 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence 4577899999986 456666676654 44799999999999988753
No 413
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=83.16 E-value=7.1 Score=32.59 Aligned_cols=77 Identities=22% Similarity=0.151 Sum_probs=51.3
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-C----C--
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T----P-- 226 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~----~-- 226 (277)
.+.+||-.|++.|. ++..|++++. +|++++.++.-++.+.+.+...+ ..++.++.+|+.+. . +
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSN------HENVVFHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT------CCSEEEEECCTTSCHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC------CCceEEEEccCCCcHHHHHHHHH
Confidence 45678888876552 4455555565 69999999888777766654422 24688899999885 2 0
Q ss_pred ----CCCceeEEecchhh
Q 023787 227 ----ETGRYDVIWVQWCI 240 (277)
Q Consensus 227 ----~~~~fD~Vi~~~~l 240 (277)
.-+..|++|.+-.+
T Consensus 84 ~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHHHSSCCEEEECCCC
T ss_pred HHHHhCCCCCEEEECCcc
Confidence 01478999876543
No 414
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=83.03 E-value=2.8 Score=34.62 Aligned_cols=104 Identities=12% Similarity=-0.040 Sum_probs=62.0
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEE-eCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gv-D~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
.+.++|-.|++.|. ++..|++.+. +|+.+ +.+....+...+.+... ..++.++.+|+.+.. ..
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~ 78 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKL-------GRSALAIKADLTNAAEVEAAIS 78 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTT-------TSCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhc-------CCceEEEEcCCCCHHHHHHHHH
Confidence 45678888877663 4455555566 47777 66666666655554332 245778889988743 00
Q ss_pred -----CCceeEEecchhhh-------cCChhhHH-----------HHHHHHHhcCCCCcEEEEE
Q 023787 228 -----TGRYDVIWVQWCIG-------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 228 -----~~~fD~Vi~~~~l~-------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~ 268 (277)
-+..|+++.+-... ..+.+++. .+.+.+...++++|.+++.
T Consensus 79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 79 AAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp HHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 14789998654322 23333333 2345566667778887765
No 415
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=82.58 E-value=2.7 Score=31.71 Aligned_cols=96 Identities=10% Similarity=0.001 Sum_probs=51.2
Q ss_pred CCCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCCCc
Q 023787 156 NQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (277)
Q Consensus 156 ~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~ 230 (277)
.++.+|+=+|||. |......+.....+|+++|.++.-++.+++ . ....++.+|..+.. ..-..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~---------~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E---------FSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T---------CCSEEEESCTTSHHHHHTTTGGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c---------CCCcEEEecCCCHHHHHHcCccc
Confidence 3567899999874 443333333333369999998765543321 1 11234445543311 11236
Q ss_pred eeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 231 fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+|+|+..-.- ......+..+.+.+.|...++..
T Consensus 85 ad~Vi~~~~~-----~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 85 ADMVFAFTND-----DSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp CSEEEECSSC-----HHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CCEEEEEeCC-----cHHHHHHHHHHHHHCCCCeEEEE
Confidence 8888865431 23334455556656666666554
No 416
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=82.34 E-value=9.4 Score=31.66 Aligned_cols=89 Identities=13% Similarity=0.061 Sum_probs=52.6
Q ss_pred cEEEeeccc-c-HHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCC-ceeEEe
Q 023787 160 VALDCGSGI-G-RITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-RYDVIW 235 (277)
Q Consensus 160 ~VLDiGcGt-G-~~s~~l~~~~~~-~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~fD~Vi 235 (277)
+|.=||+|. | .++..+...+.. +|+++|.++..++.+++. +. ......+..+.. . ..|+|+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~--------~~~~~~~~~~~~---~~~aDvVi 67 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI--------IDEGTTSIAKVE---DFSPDFVM 67 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS--------CSEEESCGGGGG---GTCCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CC--------cccccCCHHHHh---cCCCCEEE
Confidence 578889884 3 334444444442 699999999888776542 11 000112222111 2 578888
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.+-. ......++.++...++++.+++..
T Consensus 68 lavp-----~~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 68 LSSP-----VRTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp ECSC-----HHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred EcCC-----HHHHHHHHHHHHhhCCCCcEEEEC
Confidence 6543 334557788888889998866543
No 417
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=81.62 E-value=5.2 Score=33.11 Aligned_cols=106 Identities=18% Similarity=0.133 Sum_probs=63.8
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeC-CHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~-S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
.+.++|-.|++.|. ++..|++.+. +|+.++. +...++...+.+... ..++.++.+|+.+.. +.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKAL-------GSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHH
Confidence 45678888877653 4455555566 4887765 455555554444332 245788889988743 00
Q ss_pred -----CCceeEEecchhhh------cCChhhHH-----------HHHHHHHhcCCCCcEEEEEec
Q 023787 228 -----TGRYDVIWVQWCIG------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 228 -----~~~fD~Vi~~~~l~------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e~ 270 (277)
-+..|+++.+-... .++.+++. .+.+.+...++++|.+++.-.
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 13689998664432 23434433 345667778888898887643
No 418
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=81.59 E-value=5.9 Score=32.49 Aligned_cols=72 Identities=14% Similarity=0.052 Sum_probs=48.0
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----C--
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P-- 226 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-- 226 (277)
.+.++|-.|++.|. ++..|++.+. +|+++|.++.-++...+.+. .++.++.+|+.+.. .
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~ 75 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIG----------PAAYAVQMDVTRQDSIDAAIAA 75 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC----------CCceEEEeeCCCHHHHHHHHHH
Confidence 35678888876552 4455555566 59999999888777766653 24678888987642 0
Q ss_pred ---CCCceeEEecchh
Q 023787 227 ---ETGRYDVIWVQWC 239 (277)
Q Consensus 227 ---~~~~fD~Vi~~~~ 239 (277)
.-+..|+++.+-.
T Consensus 76 ~~~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 76 TVEHAGGLDILVNNAA 91 (259)
T ss_dssp HHHHSSSCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 0137899986644
No 419
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=81.45 E-value=14 Score=30.12 Aligned_cols=75 Identities=13% Similarity=0.025 Sum_probs=47.1
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC-
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE- 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 227 (277)
.+++||-.|++.|. ++..|++.+. +|++++.++.-++...+.+... ..++.++.+|+.+.. +.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~ 79 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSK-------GFKVEASVCDLSSRSERQELMNT 79 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHH
Confidence 34678877775542 3444555555 5999999988776655544321 235778888988642 00
Q ss_pred -----CCceeEEecchh
Q 023787 228 -----TGRYDVIWVQWC 239 (277)
Q Consensus 228 -----~~~fD~Vi~~~~ 239 (277)
.+..|+++.+-.
T Consensus 80 ~~~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 80 VANHFHGKLNILVNNAG 96 (260)
T ss_dssp HHHHTTTCCCEEEECCC
T ss_pred HHHHcCCCCCEEEECCC
Confidence 057899986654
No 420
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.87 E-value=5.5 Score=38.14 Aligned_cols=114 Identities=11% Similarity=0.071 Sum_probs=71.2
Q ss_pred CCccEEEeeccccHHHHHHHHhCC-------C--cEEEEeCCHHHHHHHHHHhCCC-------------CCCC-----CC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYF-------N--EVDLLEPVSHFLDAARESLAPE-------------NHMA-----PD 209 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-------~--~v~gvD~S~~~l~~a~~~~~~~-------------~~~~-----~~ 209 (277)
+...|+-+|||-=.....+..... . .++=||.. +.++.=++.+... .... ..
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p-~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYS-DLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECH-HHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccH-HHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 457899999998777776764422 2 34455553 3333322333210 0000 00
Q ss_pred CCcceeEEEcCCCCCC----------C-CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEecCCC
Q 023787 210 MHKATNFFCVPLQDFT----------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (277)
Q Consensus 210 ~~~~~~~~~~d~~~~~----------~-~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (277)
...+..++.+|+.+.. + ....-=++++-.++.|++.++...+|+.+.+. |+|.+++.|.+.+
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~ 258 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIP 258 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCT
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecC
Confidence 0135677888988741 1 33455677788899999999999999999864 7888888787654
No 421
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=80.65 E-value=5.9 Score=33.06 Aligned_cols=101 Identities=22% Similarity=0.169 Sum_probs=62.6
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-----C-
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~- 227 (277)
.++++|-.|++.|. ++..|++.+. +|+++|.++.-++...+.+. .++.++.+|+.+... .
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~ 96 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIG----------CGAAACRVDVSDEQQIIAMVDA 96 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHC----------SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcC----------CcceEEEecCCCHHHHHHHHHH
Confidence 35678888887663 4555665666 59999999888877766652 346778889887420 0
Q ss_pred ----CCceeEEecchhhh------cCChhhHHHH-----------HHHHHhcC--CCCcEEEEE
Q 023787 228 ----TGRYDVIWVQWCIG------HLTDDDFVSF-----------FKRAKVGL--KPGGFFVLK 268 (277)
Q Consensus 228 ----~~~fD~Vi~~~~l~------~~~~~d~~~~-----------l~~~~r~L--kpGG~lii~ 268 (277)
-+..|+++.+-.+. ..+.+++... .+.+...+ +.+|.+++.
T Consensus 97 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~i 160 (277)
T 3gvc_A 97 CVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNL 160 (277)
T ss_dssp HHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 13689998665432 2333443322 34444444 567877765
No 422
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=80.54 E-value=5.3 Score=33.80 Aligned_cols=89 Identities=11% Similarity=0.033 Sum_probs=52.6
Q ss_pred CccEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 158 HLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 158 ~~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
..+|.=||+|. | .++..+++.+. +|+++|.++..++.+.+.- ......+..+.. ...|+|+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g-------------~~~~~~~~~e~~---~~aDvvi 69 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEG-------------ACGAAASAREFA---GVVDALV 69 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTT-------------CSEEESSSTTTT---TTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcC-------------CccccCCHHHHH---hcCCEEE
Confidence 45788999884 2 24444555555 5999999998888776531 111133443332 3468888
Q ss_pred cchhhhcCChhhHHHHH---HHHHhcCCCCcEEEE
Q 023787 236 VQWCIGHLTDDDFVSFF---KRAKVGLKPGGFFVL 267 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l---~~~~r~LkpGG~lii 267 (277)
.+-.- +.....++ +.+...++||..++-
T Consensus 70 ~~vp~----~~~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 70 ILVVN----AAQVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp ECCSS----HHHHHHHHC--CCCGGGSCTTCEEEE
T ss_pred EECCC----HHHHHHHHhChhhHHhhCCCCCEEEe
Confidence 65432 12334455 566677888776653
No 423
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=80.50 E-value=3 Score=34.14 Aligned_cols=104 Identities=22% Similarity=0.124 Sum_probs=59.7
Q ss_pred CCccEEEeeccccH---HHHHHHH-hCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 157 QHLVALDCGSGIGR---ITKNLLI-RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~-~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
++.+||-.|++.|. ++..|++ .+. +|++++.++.-++...+.+... ..++.++.+|+.+.. +.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~~~~~~~~~~~ 74 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAE-------GLSPRFHQLDIDDLQSIRALRD 74 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHT-------TCCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhc-------CCeeEEEECCCCCHHHHHHHHH
Confidence 34578877755432 3333444 444 6999999887766665554321 134778889988642 00
Q ss_pred -----CCceeEEecchhhhcC-----C-hhhH-----------HHHHHHHHhcCCCCcEEEEE
Q 023787 228 -----TGRYDVIWVQWCIGHL-----T-DDDF-----------VSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 228 -----~~~fD~Vi~~~~l~~~-----~-~~d~-----------~~~l~~~~r~LkpGG~lii~ 268 (277)
-+.+|+||.+-..... + .+++ ..+++.+...++++|.+++.
T Consensus 75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 75 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 1368999865432211 1 1222 23455566667777887775
No 424
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=80.46 E-value=4.3 Score=33.35 Aligned_cols=106 Identities=18% Similarity=0.003 Sum_probs=62.7
Q ss_pred CCCCccEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023787 155 NNQHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (277)
Q Consensus 155 ~~~~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (277)
..++++||-.|++ .|. ++..|++.+. +|++++.+....+.+++.... ...+.++.+|+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~ 81 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAE--------FGSELVFPCDVADDAQIDA 81 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHH--------TTCCCEEECCTTCHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHH--------cCCcEEEECCCCCHHHHHH
Confidence 3467899999964 333 3445555565 599998875544444443322 123677888988743
Q ss_pred -C-----CCCceeEEecchhhhc-----------CChhhHHH-----------HHHHHHhcCCCCcEEEEEe
Q 023787 226 -P-----ETGRYDVIWVQWCIGH-----------LTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -~-----~~~~fD~Vi~~~~l~~-----------~~~~d~~~-----------~l~~~~r~LkpGG~lii~e 269 (277)
+ .-++.|++|.+-.+.. .+.+++.. +++.+...++++|.+++.-
T Consensus 82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 82 LFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 0 0147899996654322 34444332 3455666777788877753
No 425
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=80.40 E-value=10 Score=33.17 Aligned_cols=101 Identities=13% Similarity=0.024 Sum_probs=58.3
Q ss_pred CccEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCC-CCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH-MAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 158 ~~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..+|.=||+|. |. ++..+++.+. +|+.+|.++..++..++....... .+.....++.+. .|+.+. -...|+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea---~~~aDvV 103 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS---LEGVTDI 103 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH---HTTCCEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH---HhcCCEE
Confidence 46899999984 33 3444444444 599999999988877765321100 000111122221 122111 0246888
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+.+- +......+++++...++|+-.++..
T Consensus 104 ilaV-----p~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 104 LIVV-----PSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp EECC-----CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EECC-----CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7653 3346678999999999988766543
No 426
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=80.29 E-value=11 Score=30.00 Aligned_cols=89 Identities=12% Similarity=0.029 Sum_probs=53.5
Q ss_pred cEEEeeccccHHHHHHHH----hCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023787 160 VALDCGSGIGRITKNLLI----RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (277)
Q Consensus 160 ~VLDiGcGtG~~s~~l~~----~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (277)
+|+=+|+| .++..+++ .+. .|+++|.+++.++...+.. ...++.+|..+.. ..-..+
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~------------~~~~i~gd~~~~~~l~~a~i~~a 66 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL------------KATIIHGDGSHKEILRDAEVSKN 66 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS------------SSEEEESCTTSHHHHHHHTCCTT
T ss_pred EEEEECCC--HHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc------------CCeEEEcCCCCHHHHHhcCcccC
Confidence 57777764 44444433 344 5999999999887765432 2456777776532 112467
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
|+|++... ++.....+....+.+.|...++..
T Consensus 67 d~vi~~~~-----~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 67 DVVVILTP-----RDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp CEEEECCS-----CHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred CEEEEecC-----CcHHHHHHHHHHHHHcCCCeEEEE
Confidence 88886543 223335566666666676666553
No 427
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=79.82 E-value=4.5 Score=34.14 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=63.2
Q ss_pred CCccEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023787 157 QHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (277)
Q Consensus 157 ~~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (277)
.+.++|-.|++ .|. ++..|++.+. +|++++.++...+.+.+..... ..+.++.+|+.+.. +
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~ 99 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESL--------GVKLTVPCDVSDAESVDNMF 99 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHH--------TCCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhc--------CCeEEEEcCCCCHHHHHHHH
Confidence 45688999974 443 5555666666 5999999876555444433221 23567888988743 0
Q ss_pred C-----CCceeEEecchhhh----------cCChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023787 227 E-----TGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~-----~~~fD~Vi~~~~l~----------~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e 269 (277)
. -+..|++|.+-.+. ..+.+++. .+++.+...++.+|.+++.-
T Consensus 100 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 100 KVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 0 14789998665332 23333333 24456667778889888763
No 428
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=79.76 E-value=9.1 Score=31.45 Aligned_cols=107 Identities=14% Similarity=0.122 Sum_probs=67.2
Q ss_pred CCccEEEeec----cccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------
Q 023787 157 QHLVALDCGS----GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (277)
Q Consensus 157 ~~~~VLDiGc----GtG~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------ 225 (277)
+++++|--|+ |.|. .+..|++.+. +|..++.++..++.+.+.+...+ ..++.++.+|+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~ 77 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLN------QPEAHLYQIDVQSDEEVINGF 77 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGT------CSSCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC------CCcEEEEEccCCCHHHHHHHH
Confidence 4678888885 4554 4556666666 59999999888888777665432 235778888987642
Q ss_pred ----CCCCceeEEecchhh----------hcCChhhHHH-----------HHHHHHhcCCCCcEEEEEec
Q 023787 226 ----PETGRYDVIWVQWCI----------GHLTDDDFVS-----------FFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 226 ----~~~~~fD~Vi~~~~l----------~~~~~~d~~~-----------~l~~~~r~LkpGG~lii~e~ 270 (277)
-.-++.|+++.+-.+ ...+.+++.. ..+.+...++.+|.++..-.
T Consensus 78 ~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS 147 (256)
T 4fs3_A 78 EQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTY 147 (256)
T ss_dssp HHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEEC
T ss_pred HHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEec
Confidence 011578988865332 1222233322 22345567788999887643
No 429
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=79.73 E-value=8.5 Score=32.05 Aligned_cols=101 Identities=14% Similarity=0.075 Sum_probs=61.1
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC-
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE- 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 227 (277)
.+.++|-.|++.|. ++..|++.+. +|+++|.++..++...+... .++.++.+|+.+.. ..
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~ 94 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIG----------SKAFGVRVDVSSAKDAESMVEK 94 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC----------CceEEEEecCCCHHHHHHHHHH
Confidence 35678888876653 4445555566 59999999887776665542 34777888988642 00
Q ss_pred ----CCceeEEecchhh------hcCChhhHHHH-----------HHHHHhcCCC--CcEEEEE
Q 023787 228 ----TGRYDVIWVQWCI------GHLTDDDFVSF-----------FKRAKVGLKP--GGFFVLK 268 (277)
Q Consensus 228 ----~~~fD~Vi~~~~l------~~~~~~d~~~~-----------l~~~~r~Lkp--GG~lii~ 268 (277)
-++.|+++.+-.+ ...+.+++... .+.+...++. +|.+++.
T Consensus 95 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~i 158 (277)
T 4dqx_A 95 TTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINT 158 (277)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 1368998866443 23344444322 3345555543 5677765
No 430
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=79.17 E-value=8.4 Score=31.95 Aligned_cols=104 Identities=19% Similarity=0.112 Sum_probs=62.0
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeC-CHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~-S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
.++++|-.|++.|. ++..|++.+. +|+.++. +...++...+.+... ..++.++.+|+.+.. ..
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQA-------GGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHH
Confidence 45688888887653 4455555566 4888754 345555544444321 245778888988643 00
Q ss_pred -----CCceeEEecchhh------hcCChhhHH-----------HHHHHHHhcCCCCcEEEEE
Q 023787 228 -----TGRYDVIWVQWCI------GHLTDDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 228 -----~~~fD~Vi~~~~l------~~~~~~d~~-----------~~l~~~~r~LkpGG~lii~ 268 (277)
-++.|+++.+-.+ ...+.+++. .+++.+.+.|+++|.+++.
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 1368999866432 223433333 3456677778888888776
No 431
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=79.03 E-value=2.5 Score=38.91 Aligned_cols=88 Identities=14% Similarity=0.014 Sum_probs=52.8
Q ss_pred CCCccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 156 NQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 156 ~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
..+.+|+-+|+| .|......++....+|+++|.++.-++.+++.- .++ .++.+. . ...|+|
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G-------------a~~--~~l~e~-l--~~aDvV 333 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG-------------FDV--VTVEEA-I--GDADIV 333 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------------CEE--CCHHHH-G--GGCSEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------------CEE--ecHHHH-H--hCCCEE
Confidence 467899999987 344444444443347999999998777765421 111 122111 1 357998
Q ss_pred ecchhhhcCChhhHHHHH-HHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTDDDFVSFF-KRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l-~~~~r~LkpGG~lii~e 269 (277)
+..-.-.+ ++ .+..+.|||||+++..-
T Consensus 334 i~atgt~~--------~i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 334 VTATGNKD--------IIMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp EECSSSSC--------SBCHHHHHHSCTTCEEEECS
T ss_pred EECCCCHH--------HHHHHHHHhcCCCcEEEEeC
Confidence 87532222 12 24556789999988653
No 432
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=78.85 E-value=13 Score=30.63 Aligned_cols=85 Identities=13% Similarity=0.032 Sum_probs=52.2
Q ss_pred cEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecc
Q 023787 160 VALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (277)
Q Consensus 160 ~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~ 237 (277)
+|.=||||. | .++..+.+.+. +|+++|.++..++.+++. +. . .. ...+..+. ...|+|+.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~----g~-----~--~~-~~~~~~~~----~~~D~vi~a 64 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVER----QL-----V--DE-AGQDLSLL----QTAKIIFLC 64 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TS-----C--SE-EESCGGGG----TTCSEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhC----CC-----C--cc-ccCCHHHh----CCCCEEEEE
Confidence 577889874 2 23444444455 699999999888776532 11 0 01 12233322 357988866
Q ss_pred hhhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
-. ......++.++...++||..++
T Consensus 65 v~-----~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 65 TP-----IQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp SC-----HHHHHHHHHHHGGGSCTTCEEE
T ss_pred CC-----HHHHHHHHHHHHhhCCCCCEEE
Confidence 44 2345678888888898887654
No 433
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=78.39 E-value=2 Score=37.26 Aligned_cols=91 Identities=16% Similarity=0.132 Sum_probs=52.5
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (277)
..++.+||-.|+ |.|..+..+++.. ..+|++++ ++.-.+.++ +.. . ..+. .-.++. .
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga--------~---~~~~-~~~~~~~~~~~~ 204 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV--------T---HLFD-RNADYVQEVKRI 204 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS--------S---EEEE-TTSCHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC--------c---EEEc-CCccHHHHHHHh
Confidence 567889999998 4677777777654 44788888 555555554 221 0 1111 111110 1
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
..+.+|+|+-+-.- ..+..+.+.|++||++++.-
T Consensus 205 ~~~g~Dvv~d~~g~---------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 205 SAEGVDIVLDCLCG---------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp CTTCEEEEEEECC----------------CTTEEEEEEEEEEC
T ss_pred cCCCceEEEECCCc---------hhHHHHHHHhhcCCEEEEEC
Confidence 12579999854321 12366789999999999763
No 434
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=78.16 E-value=1.5 Score=36.45 Aligned_cols=41 Identities=5% Similarity=-0.037 Sum_probs=28.2
Q ss_pred CCceeEEecchhhhcC--------Chh----hHHHHHHHHHhcCCCCcEEEEE
Q 023787 228 TGRYDVIWVQWCIGHL--------TDD----DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 228 ~~~fD~Vi~~~~l~~~--------~~~----d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+++||+|++.-....- ..+ .+...+.++.++|+|||.+++.
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4678888866543211 111 3457888899999999998875
No 435
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=77.60 E-value=9.6 Score=31.26 Aligned_cols=77 Identities=21% Similarity=0.179 Sum_probs=47.2
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC--
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE-- 227 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 227 (277)
+.++|-.|++.|. ++..|++.+. +|++++.++..++...+.+..... ..++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~ 80 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFE-----PQKTLFIQCDVADQQQLRDTFRKV 80 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSC-----GGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcC-----CCceEEEecCCCCHHHHHHHHHHH
Confidence 4578888876552 3444555555 599999998777665555433100 235778888988642 00
Q ss_pred ---CCceeEEecchhh
Q 023787 228 ---TGRYDVIWVQWCI 240 (277)
Q Consensus 228 ---~~~fD~Vi~~~~l 240 (277)
-+..|+++.+-..
T Consensus 81 ~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 81 VDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1357998876543
No 436
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.23 E-value=4.8 Score=33.34 Aligned_cols=74 Identities=15% Similarity=0.107 Sum_probs=46.7
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh---CCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESL---APENHMAPDMHKATNFFCVPLQDFT-----P 226 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (277)
+.++|-.|++.|. ++..|++.+. +|++++.++.-++...+.+ ... ..++.++.+|+.+.. +
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~ 77 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVS-------EQNVNSVVADVTTDAGQDEIL 77 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCC-------GGGEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccC-------CCceeEEecccCCHHHHHHHH
Confidence 4567877776542 3444555555 5999999988777665554 221 245778888987642 0
Q ss_pred C-----CCceeEEecchh
Q 023787 227 E-----TGRYDVIWVQWC 239 (277)
Q Consensus 227 ~-----~~~fD~Vi~~~~ 239 (277)
. -+..|+++.+-.
T Consensus 78 ~~~~~~~g~id~lv~~Ag 95 (278)
T 1spx_A 78 STTLGKFGKLDILVNNAG 95 (278)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 0 136899886654
No 437
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=77.22 E-value=5.5 Score=33.53 Aligned_cols=105 Identities=14% Similarity=0.050 Sum_probs=61.7
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCC--HHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPV--SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S--~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (277)
.++++|-.|++.|. ++..|++.+. +|+.++.+ ....+...+..... ..++.++.+|+.+.. .
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~ 119 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEEC-------GRKAVLLPGDLSDESFARSLV 119 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHT-------TCCEEECCCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHc-------CCcEEEEEecCCCHHHHHHHH
Confidence 35678888876553 3444555565 58888876 33444444433321 235777888887642 0
Q ss_pred C-----CCceeEEecchhh-------hcCChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023787 227 E-----TGRYDVIWVQWCI-------GHLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 227 ~-----~~~fD~Vi~~~~l-------~~~~~~d~~-----------~~l~~~~r~LkpGG~lii~e 269 (277)
. -+..|+++.+... ..++.+++. .+++.+...++.+|.+++.-
T Consensus 120 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 120 HKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 0 1468998865443 223434333 34566777788889888763
No 438
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=77.15 E-value=6.7 Score=31.73 Aligned_cols=74 Identities=15% Similarity=0.063 Sum_probs=49.4
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC---------
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--------- 225 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------- 225 (277)
++++|=.|++.|. ++..|++++. +|++++.++..++...+.+... ..++.++.+|+.+..
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEK-------GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCceEEEEecCCCHHHHHHHHHHH
Confidence 4678888876552 4555555565 5999999998887776665432 235788889987642
Q ss_pred -CCCCceeEEecchh
Q 023787 226 -PETGRYDVIWVQWC 239 (277)
Q Consensus 226 -~~~~~fD~Vi~~~~ 239 (277)
-..++.|+++.+-.
T Consensus 77 ~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 77 KAENLAIDILVNNAG 91 (247)
T ss_dssp HHTTCCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 01246899986644
No 439
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=77.03 E-value=2.4 Score=36.89 Aligned_cols=97 Identities=9% Similarity=0.027 Sum_probs=52.9
Q ss_pred CCCCccEEEeec--cccHHHHHHHHhCCC-cEEEEeCCHH---HHHHHHHHhCCCCCCCCCCCcceeEEE---cCCCCCC
Q 023787 155 NNQHLVALDCGS--GIGRITKNLLIRYFN-EVDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFC---VPLQDFT 225 (277)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~-~v~gvD~S~~---~l~~a~~~~~~~~~~~~~~~~~~~~~~---~d~~~~~ 225 (277)
..++.+||-+|+ |.|..+..+++.... .+..++.++. -++.+++. .. ..-++... .++.+..
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l-Ga--------~~vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSL-GA--------EHVITEEELRRPEMKNFF 235 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHT-TC--------SEEEEHHHHHSGGGGGTT
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhc-CC--------cEEEecCcchHHHHHHHH
Confidence 557889999996 578888888876443 3445555432 34555542 21 11111100 1111111
Q ss_pred CCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
...+.+|+|+-+-. .+ .+..+.+.|+|||++++.-
T Consensus 236 ~~~~~~Dvvid~~g-----~~----~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 236 KDMPQPRLALNCVG-----GK----SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSSCCCSEEEESSC-----HH----HHHHHHTTSCTTCEEEECC
T ss_pred hCCCCceEEEECCC-----cH----HHHHHHHhhCCCCEEEEEe
Confidence 11124898875432 11 2235678999999998863
No 440
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=76.97 E-value=11 Score=31.35 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=52.1
Q ss_pred ccEEEeec-cc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 159 LVALDCGS-GI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 159 ~~VLDiGc-Gt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.+|.=||+ |. | .++..+...+. +|+++|.++..++.+.+. +. .. .+..+. -...|+|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~----g~---------~~--~~~~~~---~~~aDvVi 72 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM----GI---------PL--TDGDGW---IDEADVVV 72 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT----TC---------CC--CCSSGG---GGTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc----CC---------Cc--CCHHHH---hcCCCEEE
Confidence 47999999 74 3 34444554555 699999999887776551 11 10 121111 13579888
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
.+-. +.....++.++...++||..++
T Consensus 73 ~av~-----~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 73 LALP-----DNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ECSC-----HHHHHHHHHHHGGGSCTTCEEE
T ss_pred EcCC-----chHHHHHHHHHHHhCCCCCEEE
Confidence 6544 3345678888888888876554
No 441
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=76.80 E-value=1.1 Score=33.66 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=27.8
Q ss_pred CCCCceeEEecchhhh-c-CChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 226 PETGRYDVIWVQWCIG-H-LTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 226 ~~~~~fD~Vi~~~~l~-~-~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
.++..||.|+...--. . .. -...++..+...|||||.|.-
T Consensus 55 Lp~stYD~V~~lt~~~~~~~~--l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQTDIK--FPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSSCSCC--CCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCccchhh--cCHHHHHHHHHHhCCCCEEEe
Confidence 4567999998543221 1 11 115899999999999999873
No 442
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=76.50 E-value=16 Score=29.78 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=55.6
Q ss_pred CccEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCH---HHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023787 158 HLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (277)
Q Consensus 158 ~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~---~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (277)
+.+||-.|++ .|. ++..|++.+. +|++++.++ ..++...+... ...++.+|+.+..
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-----------~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-----------SDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT-----------CCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC-----------CcEEEEccCCCHHHHHH
Confidence 4678888865 333 3344454555 599998876 33333322211 1356778887642
Q ss_pred ------CCCCceeEEecchhhhc-----------CChhhHHH-----------HHHHHHhcCCCCcEEEEEe
Q 023787 226 ------PETGRYDVIWVQWCIGH-----------LTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 ------~~~~~fD~Vi~~~~l~~-----------~~~~d~~~-----------~l~~~~r~LkpGG~lii~e 269 (277)
-.-+..|+++.+-.+.. .+.+++.. +++.+...++++|.+++.-
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 11247899987654322 44444333 3345556666678877753
No 443
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=76.34 E-value=16 Score=30.02 Aligned_cols=101 Identities=17% Similarity=0.103 Sum_probs=59.7
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC--
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE-- 227 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 227 (277)
++++|-.|++.|. ++..|++.+. +|++++.++.-++...+.+. .++.++.+|+.+.. +.
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~ 74 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALE----------AEAIAVVADVSDPKAVEAVFAEA 74 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC----------SSEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc----------CceEEEEcCCCCHHHHHHHHHHH
Confidence 4578888776552 3444555555 59999999877766655442 24677888887642 00
Q ss_pred ---CCceeEEecchhhhc------CChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023787 228 ---TGRYDVIWVQWCIGH------LTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ---~~~fD~Vi~~~~l~~------~~~~d~~-----------~~l~~~~r~LkpGG~lii~e 269 (277)
-++.|+++.+-.+.. .+.+++. .+++.+...++.+|.+++.-
T Consensus 75 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 136 (263)
T 2a4k_A 75 LEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTG 136 (263)
T ss_dssp HHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 136799987654332 2223322 23445555555478877753
No 444
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=76.12 E-value=10 Score=30.49 Aligned_cols=73 Identities=19% Similarity=0.114 Sum_probs=45.2
Q ss_pred ccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh-CCCCCCCCCCCcceeEEEcCCCCCC-----CC--
Q 023787 159 LVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESL-APENHMAPDMHKATNFFCVPLQDFT-----PE-- 227 (277)
Q Consensus 159 ~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 227 (277)
.++|=.|++.|. ++..|++.+. +|++++.++.-++...+.+ ... ..++.++.+|+.+.. +.
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 74 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAY-------ADKVLRVRADVADEGDVNAAIAAT 74 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTT-------GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhc-------CCcEEEEEecCCCHHHHHHHHHHH
Confidence 467777765442 3344444555 5999999988777665554 221 245788889988642 00
Q ss_pred ---CCceeEEecchh
Q 023787 228 ---TGRYDVIWVQWC 239 (277)
Q Consensus 228 ---~~~fD~Vi~~~~ 239 (277)
-+.+|+|+.+..
T Consensus 75 ~~~~~~id~li~~Ag 89 (250)
T 2cfc_A 75 MEQFGAIDVLVNNAG 89 (250)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 026899886653
No 445
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=75.73 E-value=4.8 Score=33.48 Aligned_cols=105 Identities=16% Similarity=0.106 Sum_probs=66.1
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC--------
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------- 225 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------- 225 (277)
+++++|--|++.|. .+..|++.+. +|..+|.+++.++...+.+... ..++.++.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~-------g~~~~~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRK-------GYDAHGVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHT-------TCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEeeCCCHHHHHHHHHH
Confidence 45677777877663 4555565666 5999999999888777666543 235677788887642
Q ss_pred --CCCCceeEEecchh------hhcCChhhHHHH-----------HHHHHhcC---CCCcEEEEEe
Q 023787 226 --PETGRYDVIWVQWC------IGHLTDDDFVSF-----------FKRAKVGL---KPGGFFVLKE 269 (277)
Q Consensus 226 --~~~~~fD~Vi~~~~------l~~~~~~d~~~~-----------l~~~~r~L---kpGG~lii~e 269 (277)
-.-++.|+++.+-. +..++.+++... .+.+...| +.+|.++..-
T Consensus 80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnis 145 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIG 145 (255)
T ss_dssp HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEe
Confidence 11257899986543 334555554433 24455555 2568877653
No 446
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=75.62 E-value=10 Score=32.33 Aligned_cols=101 Identities=15% Similarity=0.013 Sum_probs=56.3
Q ss_pred CCccEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 157 QHLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
...+|.=||+|. | .++..|++.+. +|+.+ .+++.++..++.-............++.. ..+... -..+|+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~~~----~~~~D~v 90 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDPSA----VQGADLV 90 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCGGG----GTTCSEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCHHH----cCCCCEE
Confidence 346899999983 3 34444444454 69999 88888887766421100000000001111 112221 1468988
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+.+--- .+...+++.+...++|+..++..-
T Consensus 91 ilavk~-----~~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 91 LFCVKS-----TDTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp EECCCG-----GGHHHHHHHHTTTSCTTCEEEEEC
T ss_pred EEEccc-----ccHHHHHHHHHHhcCCCCEEEEeC
Confidence 865432 245688999999999988766543
No 447
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=74.75 E-value=5.4 Score=32.71 Aligned_cols=104 Identities=18% Similarity=0.116 Sum_probs=58.0
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeC-CHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~-S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
.+.+||=.|++.|. ++..|++++. +|++++. ++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~-------~~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKL-------GAQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhc-------CCcEEEEEecCCCHHHHHHHHH
Confidence 34678877765432 3344444455 5999888 776666554444321 234778888987642 00
Q ss_pred -----CCceeEEecchhhh------cCChhhHHHH-----------HHHHHhcCCCCcEEEEE
Q 023787 228 -----TGRYDVIWVQWCIG------HLTDDDFVSF-----------FKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 228 -----~~~fD~Vi~~~~l~------~~~~~d~~~~-----------l~~~~r~LkpGG~lii~ 268 (277)
-+.+|+|+.+.... ..+.+++... ++.+...++.+|.+++.
T Consensus 92 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~ 154 (274)
T 1ja9_A 92 KAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILT 154 (274)
T ss_dssp HHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEE
Confidence 03689998665432 2233333222 33344555556887775
No 448
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=74.54 E-value=1.7 Score=37.54 Aligned_cols=55 Identities=11% Similarity=0.032 Sum_probs=36.2
Q ss_pred eeEE-EcCCCCC--CCCCCceeEEecchhhhcC--------C-hhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 214 TNFF-CVPLQDF--TPETGRYDVIWVQWCIGHL--------T-DDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 214 ~~~~-~~d~~~~--~~~~~~fD~Vi~~~~l~~~--------~-~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
..++ ++|..+. ..++++||+|++.-....- . ...+...+.++.++|+|||.+++.
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4555 6766432 1345689999976543211 0 013567888999999999999885
No 449
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=74.54 E-value=8.4 Score=32.57 Aligned_cols=88 Identities=14% Similarity=0.033 Sum_probs=50.5
Q ss_pred CCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE-cCCCCCCCCCCceeEE
Q 023787 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~fD~V 234 (277)
.+.+|+=||+|. |......+.....+|+++|.++.-.+.+.+ . + ..... .++.+.. ...|+|
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~---g---------~~~~~~~~l~~~l---~~aDvV 219 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-M---G---------LVPFHTDELKEHV---KDIDIC 219 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---T---------CEEEEGGGHHHHS---TTCSEE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-C---C---------CeEEchhhHHHHh---hCCCEE
Confidence 567999999873 333333333333379999999876554433 1 1 11111 2222211 368999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+..-..+.+.. +....+|||++++-.
T Consensus 220 i~~~p~~~i~~--------~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 220 INTIPSMILNQ--------TVLSSMTPKTLILDL 245 (300)
T ss_dssp EECCSSCCBCH--------HHHTTSCTTCEEEEC
T ss_pred EECCChhhhCH--------HHHHhCCCCCEEEEE
Confidence 98777655441 234678999877643
No 450
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=74.17 E-value=28 Score=28.78 Aligned_cols=88 Identities=17% Similarity=0.097 Sum_probs=52.7
Q ss_pred ccEEEeeccc-c-HHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 159 LVALDCGSGI-G-RITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~-~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.+|.=||+|. | .++..+...+ ..+|+++|.++..++.+++. +. ......+..+.. ...|+|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~--------~~~~~~~~~~~~---~~aDvVi 71 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER----GI--------VDEATADFKVFA---ALADVII 71 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT----TS--------CSEEESCTTTTG---GGCSEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc----CC--------cccccCCHHHhh---cCCCEEE
Confidence 5788999885 2 3444455554 23699999999888776542 11 001122333221 3578888
Q ss_pred cchhhhcCChhhHHHHHHHHHhc-CCCCcEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVG-LKPGGFFV 266 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~-LkpGG~li 266 (277)
.+-.. .....++.++... +++|.+++
T Consensus 72 lavp~-----~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 72 LAVPI-----KKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ECSCH-----HHHHHHHHHHHTSCCCTTCEEE
T ss_pred EcCCH-----HHHHHHHHHHHhcCCCCCCEEE
Confidence 66543 2345677888777 88876555
No 451
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=74.11 E-value=1.3 Score=38.97 Aligned_cols=68 Identities=21% Similarity=0.252 Sum_probs=41.3
Q ss_pred CCCccEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-C--CCCce
Q 023787 156 NQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-P--ETGRY 231 (277)
Q Consensus 156 ~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~--~~~~f 231 (277)
...++||=+||| +|......+...+ .|+.+|.+..-++.+++. +..+..|+.+.. . .-..+
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~~~-~v~~~~~~~~~~~~~~~~--------------~~~~~~d~~d~~~l~~~~~~~ 78 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKDEF-DVYIGDVNNENLEKVKEF--------------ATPLKVDASNFDKLVEVMKEF 78 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTTS-EEEEEESCHHHHHHHTTT--------------SEEEECCTTCHHHHHHHHTTC
T ss_pred CCccEEEEECCCHHHHHHHHHHhcCC-CeEEEEcCHHHHHHHhcc--------------CCcEEEecCCHHHHHHHHhCC
Confidence 356789999996 4544443443343 699999998887766432 334556665432 0 01367
Q ss_pred eEEecch
Q 023787 232 DVIWVQW 238 (277)
Q Consensus 232 D~Vi~~~ 238 (277)
|+|++.-
T Consensus 79 DvVi~~~ 85 (365)
T 3abi_A 79 ELVIGAL 85 (365)
T ss_dssp SEEEECC
T ss_pred CEEEEec
Confidence 9998654
No 452
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=74.08 E-value=18 Score=29.75 Aligned_cols=76 Identities=11% Similarity=0.006 Sum_probs=46.1
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-----C--
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~-- 227 (277)
+.+||-.|++.|. ++..|++.+. +|++++.++.-++...+.+...+. ..++.++.+|+.+... .
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGY-----PGTLIPYRCDLSNEEDILSMFSAI 105 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-----SSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCC-----CceEEEEEecCCCHHHHHHHHHHH
Confidence 4578877765442 3344444555 599999998777666555433211 2356778888876420 0
Q ss_pred ---CCceeEEecchh
Q 023787 228 ---TGRYDVIWVQWC 239 (277)
Q Consensus 228 ---~~~fD~Vi~~~~ 239 (277)
-+.+|+||.+..
T Consensus 106 ~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 106 RSQHSGVDICINNAG 120 (279)
T ss_dssp HHHHCCCSEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 136899886554
No 453
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=73.90 E-value=8.6 Score=31.41 Aligned_cols=71 Identities=13% Similarity=0.007 Sum_probs=44.5
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC--
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE-- 227 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 227 (277)
++++|-.|++.|. ++..|++++. +|++++.++.-++...+.+ ..++.++.+|+.+.. +.
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~ 73 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL----------GDAARYQHLDVTIEEDWQRVVAYA 73 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT----------GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh----------CCceeEEEecCCCHHHHHHHHHHH
Confidence 4678888875542 3444555555 5999999987666554433 134677888887642 00
Q ss_pred ---CCceeEEecchh
Q 023787 228 ---TGRYDVIWVQWC 239 (277)
Q Consensus 228 ---~~~fD~Vi~~~~ 239 (277)
-+..|+++.+-.
T Consensus 74 ~~~~g~iD~lv~nAg 88 (254)
T 1hdc_A 74 REEFGSVDGLVNNAG 88 (254)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 136899886644
No 454
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=73.80 E-value=22 Score=29.59 Aligned_cols=101 Identities=14% Similarity=0.163 Sum_probs=54.8
Q ss_pred ccEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCC-CCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAP-ENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.+|.=||+|. | .++..|++.+. +|+++|.+++.++..++.-.. .... .....++.+. +..+....-..+|+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNG-EEVVANLPIF--SPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETT-EEEEECCCEE--CGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCC-CeeEecceee--cchhhcccCCCCCEEE
Confidence 4789999984 3 23444444455 699999999888777654110 0000 0000001111 1111110002689888
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.+-.- .....+++.+...++|+..++..
T Consensus 80 ~~v~~-----~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 80 ALTKA-----QQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp ECSCH-----HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEecc-----ccHHHHHHHHHHhcCCCCEEEEe
Confidence 66542 24567888899999888766654
No 455
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=73.65 E-value=8.3 Score=32.27 Aligned_cols=79 Identities=18% Similarity=0.109 Sum_probs=46.3
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC--
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE-- 227 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 227 (277)
+.+||-.|++.|. ++..|++.+. +|++++.++..++...+.+..... .....++.++.+|+.+.. +.
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLP--PTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSC--TTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcc--ccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 4678888865442 3334444455 599999998777665554422000 000245788889988642 11
Q ss_pred ---CCceeEEecchh
Q 023787 228 ---TGRYDVIWVQWC 239 (277)
Q Consensus 228 ---~~~fD~Vi~~~~ 239 (277)
-+.+|+|+.+-.
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 035899986654
No 456
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=73.62 E-value=9 Score=32.90 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=54.7
Q ss_pred ccEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCC--cceeEEEcCCCCCCCCCCceeEE
Q 023787 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH--KATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.+|.=||+|. |. ++..+++.+. +|+++|.++..++..++.... .+...... .++.....+..+. -..+|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~v 79 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAI-IAEGPGLAGTAHPDLLTSDIGLA---VKDADVI 79 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSE-EEESSSCCEEECCSEEESCHHHH---HTTCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcCCe-EEeccccccccccceecCCHHHH---HhcCCEE
Confidence 5799999985 32 3444444454 599999999888877665310 00000000 0000011121110 1357888
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+.+-.-. ....+++.+...+++|..++..
T Consensus 80 i~~v~~~-----~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 80 LIVVPAI-----HHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EECSCGG-----GHHHHHHHHGGGCCTTCEEEES
T ss_pred EEeCCch-----HHHHHHHHHHHhCCCCCEEEEc
Confidence 8665422 3347888888889987765544
No 457
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=72.89 E-value=10 Score=31.75 Aligned_cols=100 Identities=14% Similarity=0.080 Sum_probs=55.4
Q ss_pred ccEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCC---------CCCCCCC---CcceeEEEcCCCCC
Q 023787 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE---------NHMAPDM---HKATNFFCVPLQDF 224 (277)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~---------~~~~~~~---~~~~~~~~~d~~~~ 224 (277)
.+|.=||+|+ | .++..++..+. +|+++|.+++.++.+++.+... ++..... ..++.+ ..++.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4788889885 2 34444555555 5999999999998887653110 0000000 001222 2222211
Q ss_pred CCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 225 ~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
-...|+|+.+-.-. .+....+++++...++|+.+++
T Consensus 83 ---~~~aDlVi~av~~~---~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 ---VKDADLVIEAVPES---LDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp ---TTTCSEEEECCCSC---HHHHHHHHHHHHHHSCTTCEEE
T ss_pred ---hccCCEEEEeccCc---HHHHHHHHHHHHhhCCCCcEEE
Confidence 13578888654311 1134578889999999887653
No 458
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=72.74 E-value=11 Score=30.49 Aligned_cols=73 Identities=15% Similarity=0.046 Sum_probs=49.3
Q ss_pred CCCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023787 156 NQHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (277)
Q Consensus 156 ~~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (277)
.++.+||-.|++.|. ++..|++.+. +|++++.++..++...+.+.. ++.+..+|+.+.. .
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~D~~~~~~~~~~~~ 80 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKD----------NYTIEVCNLANKEECSNLIS 80 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCS----------SEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhcc----------CccEEEcCCCCHHHHHHHHH
Confidence 456788988887653 3445555565 599999999888877766532 4677788887632 1
Q ss_pred CCCceeEEecchh
Q 023787 227 ETGRYDVIWVQWC 239 (277)
Q Consensus 227 ~~~~fD~Vi~~~~ 239 (277)
..+..|+++.+-.
T Consensus 81 ~~~~id~li~~Ag 93 (249)
T 3f9i_A 81 KTSNLDILVCNAG 93 (249)
T ss_dssp TCSCCSEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 1246899886654
No 459
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=72.22 E-value=2.7 Score=34.47 Aligned_cols=87 Identities=15% Similarity=0.139 Sum_probs=49.3
Q ss_pred ccEEEeeccc-c-HHHHHHHHhCC---CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 159 LVALDCGSGI-G-RITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~---~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
.+|.=||||. | .++..+.+.+. .+|+++|.+++-++.+.+.... .. ..+..+. -...|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~------------~~-~~~~~e~---~~~aDv 66 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGL------------TT-TTDNNEV---AKNADI 66 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCC------------EE-CSCHHHH---HHHCSE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCC------------EE-eCChHHH---HHhCCE
Confidence 4688899884 2 34555555554 2699999999888877654321 11 1111110 024677
Q ss_pred EecchhhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 234 Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
|+.+- ++.....+++++...++||..++
T Consensus 67 Vilav-----~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 67 LILSI-----KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp EEECS-----CTTTHHHHC---CCSSCTTCEEE
T ss_pred EEEEe-----CHHHHHHHHHHHHhhcCCCCEEE
Confidence 77654 23355677777777777776544
No 460
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=72.04 E-value=27 Score=31.54 Aligned_cols=100 Identities=17% Similarity=0.129 Sum_probs=55.9
Q ss_pred CccEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCC-------CC-CCCCCC-CcceeEEEcCCCCCCC
Q 023787 158 HLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAP-------EN-HMAPDM-HKATNFFCVPLQDFTP 226 (277)
Q Consensus 158 ~~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~-------~~-~~~~~~-~~~~~~~~~d~~~~~~ 226 (277)
..+|.-||+|. | .++..++..+. .|+++|.+++.++.+++.... .+ +..... .....+ ..++..+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~-- 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL-- 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH--
Confidence 35799999996 3 34444554555 599999999988887653210 00 000000 011122 3333221
Q ss_pred CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 227 ~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
...|+|+.+-.- ..+-...+++++...++||.+++
T Consensus 113 --~~aDlVIeaVpe---~~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 113 --STVDLVVEAVFE---DMNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp --TTCSEEEECCCS---CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred --CCCCEEEEcCCC---CHHHHHHHHHHHHhhCCCCeEEE
Confidence 357888865431 11123568888988998887654
No 461
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=71.86 E-value=8.1 Score=31.80 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=59.3
Q ss_pred CCccEEEeeccccHHHHHHHHh----CCCcEEEEeCC---HHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023787 157 QHLVALDCGSGIGRITKNLLIR----YFNEVDLLEPV---SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~----~~~~v~gvD~S---~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (277)
.+.++|-.|++.| ++..++.. +. +|+.++.+ ...++...+.+... ..++.++.+|+.+..
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~ 80 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQ-------GAKVALYQSDLSNEEEVAK 80 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTT-------TCEEEEEECCCCSHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHH
Confidence 4567887777655 33334443 44 58887654 34455554444332 246788889988743
Q ss_pred -CC-----CCceeEEecchhh------hcCChhhHHH-----------HHHHHHhcCCCCcEEEEE
Q 023787 226 -PE-----TGRYDVIWVQWCI------GHLTDDDFVS-----------FFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 226 -~~-----~~~fD~Vi~~~~l------~~~~~~d~~~-----------~l~~~~r~LkpGG~lii~ 268 (277)
+. -+..|+++.+-.+ ...+.+++.. +++.+...|+++|.+++.
T Consensus 81 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 81 LFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 00 1478999866442 2334444332 345555666778888765
No 462
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=71.71 E-value=5.5 Score=34.56 Aligned_cols=97 Identities=8% Similarity=-0.084 Sum_probs=53.8
Q ss_pred CCCC-ccEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHH----HHHHHHHhCCCCCCCCCCCcceeEEE---cCCCC-
Q 023787 155 NNQH-LVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHF----LDAARESLAPENHMAPDMHKATNFFC---VPLQD- 223 (277)
Q Consensus 155 ~~~~-~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~----l~~a~~~~~~~~~~~~~~~~~~~~~~---~d~~~- 223 (277)
..++ .+||-+|+ |.|..+..+++....+++++.-++.- .+.+++ +.. ..-++... .++.+
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-lGa--------~~vi~~~~~~~~~~~~~ 234 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE-LGA--------TQVITEDQNNSREFGPT 234 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH-HTC--------SEEEEHHHHHCGGGHHH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHh-cCC--------eEEEecCccchHHHHHH
Confidence 4567 89999996 57888888887644467777644332 455543 321 11111110 11100
Q ss_pred CC-C---CCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023787 224 FT-P---ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 224 ~~-~---~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e 269 (277)
+. . ..+.+|+|+-+-.- . .+. .+.+.|++||++++.-
T Consensus 235 i~~~t~~~~~g~Dvvid~~G~------~--~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 235 IKEWIKQSGGEAKLALNCVGG------K--SST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHHHHHTCCEEEEEESSCH------H--HHH-HHHHTSCTTCEEEECC
T ss_pred HHHHhhccCCCceEEEECCCc------h--hHH-HHHHHhccCCEEEEec
Confidence 00 0 12469999854331 1 233 5679999999998764
No 463
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=71.41 E-value=15 Score=30.33 Aligned_cols=84 Identities=13% Similarity=0.029 Sum_probs=50.1
Q ss_pred cEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecc
Q 023787 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (277)
Q Consensus 160 ~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~ 237 (277)
+|.=||||. |. ++..+.. +. +|+++|.++..++.+.+.- +... +..+. -...|+|+.+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g-------------~~~~--~~~~~---~~~~D~vi~~ 62 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEF-------------GSEA--VPLER---VAEARVIFTC 62 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHH-------------CCEE--CCGGG---GGGCSEEEEC
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCC-------------Cccc--CHHHH---HhCCCEEEEe
Confidence 578889985 43 3444554 55 5999999988777665541 1111 11111 1357888865
Q ss_pred hhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
-.-. .....+++.+...+++|..++.
T Consensus 63 v~~~----~~~~~v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 63 LPTT----REVYEVAEALYPYLREGTYWVD 88 (289)
T ss_dssp CSSH----HHHHHHHHHHTTTCCTTEEEEE
T ss_pred CCCh----HHHHHHHHHHHhhCCCCCEEEE
Confidence 4321 1244677778788888776654
No 464
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=71.30 E-value=33 Score=27.72 Aligned_cols=69 Identities=14% Similarity=0.129 Sum_probs=43.3
Q ss_pred cEEEeecccc---HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----------C
Q 023787 160 VALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----------P 226 (277)
Q Consensus 160 ~VLDiGcGtG---~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 226 (277)
++|-.|++.| .++..|++.+. +|++++.++.-++...+.+. .++.++.+|+.+.. -
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~ 70 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELG----------DNLYIAQLDVRNRAAIEEMLASLPA 70 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHTSCT
T ss_pred EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc----------CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4565665444 24455555565 59999999887776665543 23677888887632 1
Q ss_pred CCCceeEEecchh
Q 023787 227 ETGRYDVIWVQWC 239 (277)
Q Consensus 227 ~~~~fD~Vi~~~~ 239 (277)
.-+..|+++.+-.
T Consensus 71 ~~g~iD~lvnnAg 83 (248)
T 3asu_A 71 EWCNIDILVNNAG 83 (248)
T ss_dssp TTCCCCEEEECCC
T ss_pred hCCCCCEEEECCC
Confidence 1247899986543
No 465
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=71.28 E-value=8.6 Score=32.80 Aligned_cols=99 Identities=10% Similarity=-0.005 Sum_probs=53.6
Q ss_pred CCccEEEeeccc-c-HHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023787 157 QHLVALDCGSGI-G-RITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (277)
Q Consensus 157 ~~~~VLDiGcGt-G-~~s~~l~~~~~-~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (277)
+..+|.=+|+|. | .++..++..+. .++..+|++++....+.+..... ..++... .|..++ ...|+
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~-------~~~i~~t-~d~~~l----~~aD~ 80 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFN-------LPNVEIS-KDLSAS----AHSKV 80 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHT-------CTTEEEE-SCGGGG----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhc-------CCCeEEe-CCHHHH----CCCCE
Confidence 446899999995 3 24444555554 37999999986333333332110 1233332 444332 35788
Q ss_pred Eecchh------------hhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 234 IWVQWC------------IGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 234 Vi~~~~------------l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|+.... ...++ -...+++.+.+.. |++++++.-|
T Consensus 81 Vi~aag~~~pG~tR~dl~~~n~~--i~~~i~~~i~~~~-p~a~iiv~sN 126 (303)
T 2i6t_A 81 VIFTVNSLGSSQSYLDVVQSNVD--MFRALVPALGHYS-QHSVLLVASQ 126 (303)
T ss_dssp EEECCCC----CCHHHHHHHHHH--HHHHHHHHHHHHT-TTCEEEECSS
T ss_pred EEEcCCCCCCCCCHHHHHHHHHH--HHHHHHHHHHHhC-CCeEEEEcCC
Confidence 887641 11111 2456777777775 9999887655
No 466
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=71.18 E-value=22 Score=28.24 Aligned_cols=69 Identities=10% Similarity=-0.016 Sum_probs=44.9
Q ss_pred cEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-------CCCC
Q 023787 160 VALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------PETG 229 (277)
Q Consensus 160 ~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~ 229 (277)
+||=.|++.|. ++..|++++.. |++++.++..++.+.+.+. .++.++.+|+.+.. .-..
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKA-TYLTGRSESKLSTVTNCLS----------NNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTCS----------SCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred EEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHh----------hccCeEeecCCCHHHHHHHHHHHhh
Confidence 57777776553 44455555664 9999999988887766552 34677888887642 1113
Q ss_pred ceeEEecchh
Q 023787 230 RYDVIWVQWC 239 (277)
Q Consensus 230 ~fD~Vi~~~~ 239 (277)
.+|+++.+..
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 4588886543
No 467
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=70.95 E-value=7.9 Score=32.17 Aligned_cols=104 Identities=19% Similarity=0.162 Sum_probs=58.3
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHH-HHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC-
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSH-FLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE- 227 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 227 (277)
+.++|-.|++.|. ++..|++.+. +|++++.++. ..+...+.+... ..++.++.+|+.+.. +.
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKN-------GSDAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHh-------CCCeEEEEcCCCCHHHHHHHHHH
Confidence 4578877776552 3344444555 5988887753 333333333221 234777888887642 00
Q ss_pred ----CCceeEEecchhhhc------CChhhHHH-----------HHHHHHhcCCCCcEEEEEe
Q 023787 228 ----TGRYDVIWVQWCIGH------LTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 228 ----~~~fD~Vi~~~~l~~------~~~~d~~~-----------~l~~~~r~LkpGG~lii~e 269 (277)
-+..|+++.+-.+.. ++.+++.. +++.+.+.|+.+|.+++.-
T Consensus 101 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 136899886654322 23333332 3456667777788888763
No 468
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=70.89 E-value=33 Score=28.44 Aligned_cols=60 Identities=18% Similarity=0.088 Sum_probs=38.5
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEe-CCHHHHHHHHHHhC-CCCCCCCCCCcceeEEEcCCCCCC
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLE-PVSHFLDAARESLA-PENHMAPDMHKATNFFCVPLQDFT 225 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD-~S~~~l~~a~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~ 225 (277)
+.++|-.|++.|. ++..|++.+. +|++++ .++.-++.+.+.+. .. ..++.++.+|+.+..
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARR-------PNSAITVQADLSNVA 73 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHS-------TTCEEEEECCCSSSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhc-------CCeeEEEEeecCCcc
Confidence 4577877776552 3444455555 599999 99877776655543 11 235778888888754
No 469
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=70.87 E-value=34 Score=28.18 Aligned_cols=101 Identities=16% Similarity=0.074 Sum_probs=58.2
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHH--HHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSH--FLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~--~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (277)
.++++|-=|++.|. .+..|++.+. +|..+|.+.. ..+..++. ..+..++.+|+.+.. .
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~-----------g~~~~~~~~Dv~d~~~v~~~~ 75 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKD-----------GGNASALLIDFADPLAAKDSF 75 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHT-----------TCCEEEEECCTTSTTTTTTSS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHh-----------CCcEEEEEccCCCHHHHHHHH
Confidence 45677777777664 4555665666 4988887742 33333221 235677888887643 3
Q ss_pred CCCceeEEecchh------hhcCChhhHHHHH-----------HHHHhcC-C--CCcEEEEEe
Q 023787 227 ETGRYDVIWVQWC------IGHLTDDDFVSFF-----------KRAKVGL-K--PGGFFVLKE 269 (277)
Q Consensus 227 ~~~~fD~Vi~~~~------l~~~~~~d~~~~l-----------~~~~r~L-k--pGG~lii~e 269 (277)
..++.|+++.+-. +..++.+++..++ +.+.+.| + .+|.++..-
T Consensus 76 ~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnis 138 (247)
T 4hp8_A 76 TDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIA 138 (247)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred HhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 3478999986542 3445555544332 3344444 2 368877653
No 470
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=70.84 E-value=10 Score=31.32 Aligned_cols=104 Identities=18% Similarity=0.123 Sum_probs=61.3
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEE-eCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gv-D~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (277)
.+.++|-.|++.|. ++..|++.+.. |+.+ ..++...+...+.+... ..++.++.+|+.+.. ..
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~ 97 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFT-VVINYAGKAAAAEEVAGKIEAA-------GGKALTAQADVSDPAAVRRLFA 97 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEEESSCSHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhc-------CCeEEEEEcCCCCHHHHHHHHH
Confidence 35678888877663 45556666664 7766 44555555554444322 235778888988743 00
Q ss_pred -----CCceeEEecchhh------hcCChhhHH-----------HHHHHHHhcCCCCcEEEEE
Q 023787 228 -----TGRYDVIWVQWCI------GHLTDDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 228 -----~~~fD~Vi~~~~l------~~~~~~d~~-----------~~l~~~~r~LkpGG~lii~ 268 (277)
-++.|+++.+-.+ ...+.+++. .+++.+...++++|.+++.
T Consensus 98 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 98 TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp HHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 1479999866533 223333333 2455667777788888775
No 471
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=70.70 E-value=8.1 Score=37.69 Aligned_cols=95 Identities=16% Similarity=0.075 Sum_probs=55.6
Q ss_pred CCCCCccEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC--C-CCC
Q 023787 154 RNNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--T-PET 228 (277)
Q Consensus 154 ~~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~-~~~ 228 (277)
...++.+||-.| .|.|..+..+++....+|++++.+++ .+..+ +.. ..-++....++.+. . ...
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k-~~~l~--lga--------~~v~~~~~~~~~~~i~~~t~g 410 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAVE--LSR--------EHLASSRTCDFEQQFLGATGG 410 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGG-GGGSC--SCG--------GGEECSSSSTHHHHHHHHSCS
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHH-hhhhh--cCh--------hheeecCChhHHHHHHHHcCC
Confidence 366889999999 46889999898876667999985531 11111 111 00000000011000 0 112
Q ss_pred CceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 229 ~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
..+|+|+-+.. . ..+....+.|+|||+++..
T Consensus 411 ~GvDvVld~~g-------g--~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 411 RGVDVVLNSLA-------G--EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SCCSEEEECCC-------T--TTTHHHHTSCTTCEEEEEC
T ss_pred CCeEEEEECCC-------c--HHHHHHHHHhcCCCEEEEe
Confidence 46999986432 1 3457788999999999876
No 472
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=70.42 E-value=8.7 Score=32.39 Aligned_cols=88 Identities=14% Similarity=-0.006 Sum_probs=50.0
Q ss_pred CCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEE-cCCCCCCCCCCceeEE
Q 023787 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (277)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~fD~V 234 (277)
.+.+|+=+|+|. |......+.....+|+++|.++.-.+.+.+ .. ..+.. .++.+.. ...|+|
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g------------~~~~~~~~l~~~l---~~aDvV 217 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MG------------MEPFHISKAAQEL---RDVDVC 217 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT------------SEEEEGGGHHHHT---TTCSEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CC------------CeecChhhHHHHh---cCCCEE
Confidence 567999999873 333333333333379999999876554432 11 11111 1221111 368999
Q ss_pred ecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
+.+-..+.+.. +....+|||++++-.
T Consensus 218 i~~~p~~~i~~--------~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 218 INTIPALVVTA--------NVLAEMPSHTFVIDL 243 (293)
T ss_dssp EECCSSCCBCH--------HHHHHSCTTCEEEEC
T ss_pred EECCChHHhCH--------HHHHhcCCCCEEEEe
Confidence 98766554442 233468999887643
No 473
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=70.06 E-value=24 Score=28.16 Aligned_cols=90 Identities=12% Similarity=-0.006 Sum_probs=55.3
Q ss_pred CccEEEeeccccHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023787 158 HLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~--~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (277)
..+|+=+|| |..+..+++.... .|+++|.++..++.++ .. +.++.+|..+.. ..-...
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~---~~-----------~~~i~gd~~~~~~l~~a~i~~a 72 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR---SG-----------ANFVHGDPTRVSDLEKANVRGA 72 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH---TT-----------CEEEESCTTCHHHHHHTTCTTC
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh---cC-----------CeEEEcCCCCHHHHHhcCcchh
Confidence 457888888 5666666655322 1999999988777665 11 456778876532 112467
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
|+|++... ++.....+....+.+.|+..++..
T Consensus 73 d~vi~~~~-----~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 73 RAVIVDLE-----SDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp SEEEECCS-----CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred cEEEEcCC-----CcHHHHHHHHHHHHHCCCCeEEEE
Confidence 88886542 223334555666677887666654
No 474
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=69.56 E-value=4.5 Score=35.51 Aligned_cols=90 Identities=13% Similarity=0.116 Sum_probs=52.6
Q ss_pred CccEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 158 HLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 158 ~~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
..+|.=||+|. | .++..|++.++ +|+++|.++..++.+.+. +. . ...+..+........|+|+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~----g~---------~-~~~s~~e~~~~a~~~DvVi 86 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE----GI---------A-GARSIEEFCAKLVKPRVVW 86 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT----TC---------B-CCSSHHHHHHHSCSSCEEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC----CC---------E-EeCCHHHHHhcCCCCCEEE
Confidence 36899999883 2 33444555555 599999999877766532 11 0 0011111100012348887
Q ss_pred cchhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
.+-.- .....++..+...|+||.+++-
T Consensus 87 ~~vp~-----~~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 87 LMVPA-----AVVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp ECSCG-----GGHHHHHHHHGGGCCTTCEEEE
T ss_pred EeCCH-----HHHHHHHHHHHhhCCCCCEEEe
Confidence 65432 2455788888888988876654
No 475
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=69.09 E-value=30 Score=27.48 Aligned_cols=71 Identities=23% Similarity=0.194 Sum_probs=42.6
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----C-C
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P-E 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-~ 227 (277)
++.+||=.|++.|. ++..|++.+. +|++++.++.-++...+... .++++.+|+.+.. + .
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~~~~~~~~ 73 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECP-----------GIEPVCVDLGDWDATEKALGG 73 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST-----------TCEEEECCTTCHHHHHHHHTT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcc-----------CCCcEEecCCCHHHHHHHHHH
Confidence 34678877765432 3333444455 59999999876665544321 2456678877642 1 1
Q ss_pred CCceeEEecchh
Q 023787 228 TGRYDVIWVQWC 239 (277)
Q Consensus 228 ~~~fD~Vi~~~~ 239 (277)
-+++|+|+.+..
T Consensus 74 ~~~id~vi~~Ag 85 (244)
T 1cyd_A 74 IGPVDLLVNNAA 85 (244)
T ss_dssp CCCCSEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 246899986644
No 476
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=68.78 E-value=44 Score=26.84 Aligned_cols=72 Identities=13% Similarity=0.064 Sum_probs=41.7
Q ss_pred CccEEEeeccccHHHHH----HHHhCCCcEEEEeCCH--HHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC-C-----
Q 023787 158 HLVALDCGSGIGRITKN----LLIRYFNEVDLLEPVS--HFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T----- 225 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~----l~~~~~~~v~gvD~S~--~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~----- 225 (277)
+.+||=.|++ |.++.. |++++...|++++.++ ..++...+... ..++.++.+|+.+. .
T Consensus 5 ~k~vlVtGas-~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~---------~~~~~~~~~D~~~~~~~~~~~ 74 (254)
T 1sby_A 5 NKNVIFVAAL-GGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP---------KVNITFHTYDVTVPVAESKKL 74 (254)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT---------TSEEEEEECCTTSCHHHHHHH
T ss_pred CcEEEEECCC-ChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCC---------CceEEEEEEecCCChHHHHHH
Confidence 4578888865 444443 4444553488888765 34444433321 13577888998874 2
Q ss_pred CC-----CCceeEEecchh
Q 023787 226 PE-----TGRYDVIWVQWC 239 (277)
Q Consensus 226 ~~-----~~~fD~Vi~~~~ 239 (277)
.. -+.+|+++.+-.
T Consensus 75 ~~~~~~~~g~id~lv~~Ag 93 (254)
T 1sby_A 75 LKKIFDQLKTVDILINGAG 93 (254)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHhcCCCCEEEECCc
Confidence 00 036899886654
No 477
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=67.30 E-value=20 Score=29.43 Aligned_cols=100 Identities=12% Similarity=0.082 Sum_probs=55.1
Q ss_pred CccEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCHH---HHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023787 158 HLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (277)
Q Consensus 158 ~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~~---~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (277)
+.++|-.|++ .|. ++..|++.+. +|++++.++. .++...+.. ..+.++.+|+.+..
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~-----------~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQEL-----------NSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHT-----------TCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-----------CCcEEEEcCCCCHHHHHH
Confidence 4678888864 332 2333343444 6999998765 222222221 12567788887642
Q ss_pred -C-----CCCceeEEecchhhh----------cCChhhHHH-----------HHHHHHhcCCCCcEEEEEe
Q 023787 226 -P-----ETGRYDVIWVQWCIG----------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 226 -~-----~~~~fD~Vi~~~~l~----------~~~~~d~~~-----------~l~~~~r~LkpGG~lii~e 269 (277)
. .-+..|++|.+-.+. ..+.+++.. +++.+...|+++|.+++.-
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 0 014789998665332 334343333 3345556666678887753
No 478
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=67.25 E-value=8 Score=32.17 Aligned_cols=75 Identities=16% Similarity=0.064 Sum_probs=48.6
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-------
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 226 (277)
.+.++|-.|++.|. ++..|++.+. +|+++|.++..++...+.+... ..++.++.+|+.+...
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~~~~~~~~ 103 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIAS-------GGTAQELAGDLSEAGAGTDLIER 103 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHT-------TCCEEEEECCTTSTTHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhc-------CCeEEEEEecCCCHHHHHHHHHH
Confidence 45678888876553 4455555566 5999999887766665554332 2457888899887531
Q ss_pred --CCCceeEEecchh
Q 023787 227 --ETGRYDVIWVQWC 239 (277)
Q Consensus 227 --~~~~fD~Vi~~~~ 239 (277)
..+..|+++.+-.
T Consensus 104 ~~~~g~iD~lvnnAg 118 (275)
T 4imr_A 104 AEAIAPVDILVINAS 118 (275)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 0146899986544
No 479
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=67.15 E-value=4.3 Score=34.48 Aligned_cols=51 Identities=25% Similarity=0.320 Sum_probs=31.3
Q ss_pred EcCCCCCCCCCCceeEEecchh----hhc-C---Chh-hHHHHHHHHHhcCCCCcEEEEEe
Q 023787 218 CVPLQDFTPETGRYDVIWVQWC----IGH-L---TDD-DFVSFFKRAKVGLKPGGFFVLKE 269 (277)
Q Consensus 218 ~~d~~~~~~~~~~fD~Vi~~~~----l~~-~---~~~-d~~~~l~~~~r~LkpGG~lii~e 269 (277)
.+|+..-. ..++||+|++... -|| - +.. -+.-++..+..+|+|||.|++.-
T Consensus 195 ~lDfg~p~-~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kv 254 (320)
T 2hwk_A 195 RLDLGIPG-DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIG 254 (320)
T ss_dssp CGGGCSCT-TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEE
T ss_pred ccccCCcc-ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 34554422 2267999997643 223 1 111 12336778889999999999864
No 480
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=67.13 E-value=48 Score=26.98 Aligned_cols=75 Identities=16% Similarity=0.005 Sum_probs=45.1
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEeC-CHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC----C----
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----T---- 225 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~-S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~---- 225 (277)
+.++|-.|++.|. ++..|++.+. +|++++. ++.-++...+.+.... ..++.++.+|+.+. .
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~ 83 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAAR------AGSAVLCKGDLSLSSSLLDCCED 83 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHS------TTCEEEEECCCSSSTTHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhc------CCceEEEeccCCCccccHHHHHH
Confidence 4577877766542 3344444555 5999998 8877666555442210 12477888898875 2
Q ss_pred -CC-----CCceeEEecchh
Q 023787 226 -PE-----TGRYDVIWVQWC 239 (277)
Q Consensus 226 -~~-----~~~fD~Vi~~~~ 239 (277)
+. -+..|++|.+-.
T Consensus 84 ~~~~~~~~~g~id~lv~nAg 103 (276)
T 1mxh_A 84 IIDCSFRAFGRCDVLVNNAS 103 (276)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHhcCCCCEEEECCC
Confidence 00 036899886654
No 481
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=67.01 E-value=35 Score=29.04 Aligned_cols=60 Identities=18% Similarity=0.088 Sum_probs=38.3
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEEe-CCHHHHHHHHHHhC-CCCCCCCCCCcceeEEEcCCCCCC
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLE-PVSHFLDAARESLA-PENHMAPDMHKATNFFCVPLQDFT 225 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD-~S~~~l~~a~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~ 225 (277)
+.++|-.|++.|. ++..|++.++ +|++++ .++.-++.+.+.+. .. ..++.++.+|+.+..
T Consensus 46 ~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 46 VPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARR-------PNSAITVQADLSNVA 110 (328)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHS-------TTCEEEEECCCSSSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhc-------CCeEEEEEeeCCCch
Confidence 4577877766553 3444455555 599999 88887776665543 11 235778888888754
No 482
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=66.91 E-value=9 Score=34.54 Aligned_cols=86 Identities=14% Similarity=-0.025 Sum_probs=49.9
Q ss_pred CCccEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEe
Q 023787 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (277)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi 235 (277)
.+.+|+-+|+|. |......++....+|+++|.++.-...+... . . ...++.+.. ...|+|+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~--G-----------~--~v~~Leeal---~~ADIVi 280 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMD--G-----------F--RLVKLNEVI---RQVDIVI 280 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--T-----------C--EECCHHHHT---TTCSEEE
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHc--C-----------C--EeccHHHHH---hcCCEEE
Confidence 578999999995 4444444444444799999998654444321 1 1 112222221 3568888
Q ss_pred cchhhhcCChhhHHHHH-HHHHhcCCCCcEEEEE
Q 023787 236 VQWCIGHLTDDDFVSFF-KRAKVGLKPGGFFVLK 268 (277)
Q Consensus 236 ~~~~l~~~~~~d~~~~l-~~~~r~LkpGG~lii~ 268 (277)
.+..-.+ ++ .+..+.+|||++++-.
T Consensus 281 ~atgt~~--------lI~~e~l~~MK~gailINv 306 (435)
T 3gvp_A 281 TCTGNKN--------VVTREHLDRMKNSCIVCNM 306 (435)
T ss_dssp ECSSCSC--------SBCHHHHHHSCTTEEEEEC
T ss_pred ECCCCcc--------cCCHHHHHhcCCCcEEEEe
Confidence 7422111 22 2455678999988765
No 483
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=66.75 E-value=24 Score=29.97 Aligned_cols=97 Identities=13% Similarity=0.042 Sum_probs=53.2
Q ss_pred ccEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHh-CCCCCCCCCCCcceeEE----EcCCCCCCCCCCce
Q 023787 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESL-APENHMAPDMHKATNFF----CVPLQDFTPETGRY 231 (277)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~-~~~~~~~~~~~~~~~~~----~~d~~~~~~~~~~f 231 (277)
.+|+=||+|. | .++..|.+.+. +|+.++-++ .+..++.- ...+.. .....+. ..+..+. ...+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~~Gl~~~~~~----~g~~~~~~~~~~~~~~~~---~~~~ 72 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD--YETVKAKGIRIRSAT----LGDYTFRPAAVVRSAAEL---ETKP 72 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT--HHHHHHHCEEEEETT----TCCEEECCSCEESCGGGC---SSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh--HHHHHhCCcEEeecC----CCcEEEeeeeeECCHHHc---CCCC
Confidence 4788899983 3 34444444444 699999886 25444431 000000 0111110 1122211 1368
Q ss_pred eEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023787 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (277)
Q Consensus 232 D~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~e~ 270 (277)
|+|+.+---..+. .+++.+...++|+..++..-|
T Consensus 73 DlVilavK~~~~~-----~~l~~l~~~l~~~t~Iv~~~n 106 (320)
T 3i83_A 73 DCTLLCIKVVEGA-----DRVGLLRDAVAPDTGIVLISN 106 (320)
T ss_dssp SEEEECCCCCTTC-----CHHHHHTTSCCTTCEEEEECS
T ss_pred CEEEEecCCCChH-----HHHHHHHhhcCCCCEEEEeCC
Confidence 9998766544433 578888889999887776543
No 484
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=66.64 E-value=12 Score=41.40 Aligned_cols=100 Identities=9% Similarity=-0.012 Sum_probs=64.4
Q ss_pred CCCCccEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCC-C-C-CCCC
Q 023787 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-F-T-PETG 229 (277)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~-~-~-~~~~ 229 (277)
..++.+||-.| .|.|..+..+++....+|++++.+++-.+.+++.+...+. ..-++....++.+ . . ....
T Consensus 1665 l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga-----~~v~~~~~~~~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDE-----TCFANSRDTSFEQHVLRHTAGK 1739 (2512)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCS-----TTEEESSSSHHHHHHHHTTTSC
T ss_pred CCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCc-----eEEecCCCHHHHHHHHHhcCCC
Confidence 56788999997 4688888888877666899999999988888886532111 0001000001000 0 0 1123
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
.+|+|+-+.. . ..+....+.|+|||+++..
T Consensus 1740 GvDvVld~~g-------~--~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1740 GVDLVLNSLA-------E--EKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp CEEEEEECCC-------H--HHHHHHHTTEEEEEEEEEC
T ss_pred CceEEEECCC-------c--hHHHHHHHhcCCCcEEEEe
Confidence 6999986432 1 4688889999999998875
No 485
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=66.27 E-value=4.6 Score=34.15 Aligned_cols=86 Identities=15% Similarity=0.126 Sum_probs=51.8
Q ss_pred ccEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
.+|.=||+|. |. ++..+++.+. +|+++|.++..++.+.+. + +. ...+..+.. . .|+|+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~----g---------~~-~~~~~~~~~---~-aDvvi~ 76 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA----G---------AT-LADSVADVA---A-ADLIHI 76 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT----T---------CE-ECSSHHHHT---T-SSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC----C---------CE-EcCCHHHHH---h-CCEEEE
Confidence 5789999984 32 3444444454 599999998877766543 1 11 111222211 2 688876
Q ss_pred chhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
+-.- +.....+++.+...++||.+++-
T Consensus 77 ~vp~----~~~~~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 77 TVLD----DAQVREVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp CCSS----HHHHHHHHHHHHTTCCTTCEEEE
T ss_pred ECCC----hHHHHHHHHHHHHhcCCCCEEEE
Confidence 5431 22455777888888888876654
No 486
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=65.88 E-value=19 Score=25.83 Aligned_cols=89 Identities=11% Similarity=-0.035 Sum_probs=46.4
Q ss_pred CccEEEeeccccHHHHHHH----HhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC----CCCC
Q 023787 158 HLVALDCGSGIGRITKNLL----IRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~----~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~ 229 (277)
..+|+=+|+| ..+..++ ..+. +|+++|.++..++.+++. ...++.+|..+.. ....
T Consensus 6 ~~~v~I~G~G--~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~-------------~~~~~~~d~~~~~~l~~~~~~ 69 (144)
T 2hmt_A 6 NKQFAVIGLG--RFGGSIVKELHRMGH-EVLAVDINEEKVNAYASY-------------ATHAVIANATEENELLSLGIR 69 (144)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTT-------------CSEEEECCTTCHHHHHTTTGG
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh-------------CCEEEEeCCCCHHHHHhcCCC
Confidence 3579999985 3333333 2344 599999987655433211 1234555654321 1124
Q ss_pred ceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEEE
Q 023787 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (277)
Q Consensus 230 ~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~lii 267 (277)
.+|+|+.+-.-. .+....+....+.+.+. .++.
T Consensus 70 ~~d~vi~~~~~~----~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 70 NFEYVIVAIGAN----IQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp GCSEEEECCCSC----HHHHHHHHHHHHHTTCS-EEEE
T ss_pred CCCEEEECCCCc----hHHHHHHHHHHHHcCCC-eEEE
Confidence 689888654321 02223344455556675 5554
No 487
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=65.28 E-value=2.3 Score=35.70 Aligned_cols=41 Identities=27% Similarity=0.401 Sum_probs=27.8
Q ss_pred CCceeEEecch----hhhcCC-hh----hHHHHHHHHHhcCCCCcEEEEE
Q 023787 228 TGRYDVIWVQW----CIGHLT-DD----DFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 228 ~~~fD~Vi~~~----~l~~~~-~~----d~~~~l~~~~r~LkpGG~lii~ 268 (277)
-++||+|+++- =.||.. -+ .+.-+-....+.|+|||.+++.
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~ 258 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIR 258 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 37999999763 244432 11 2344556677899999999986
No 488
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=65.23 E-value=15 Score=30.41 Aligned_cols=104 Identities=16% Similarity=0.140 Sum_probs=66.2
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-------
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 226 (277)
+++.+|--|++.|. .+..|++.+. +|..+|.+++-++...+.+... ..++.++.+|+.+...
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~-------g~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGM-------GKEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHH
Confidence 45677888877764 4555555566 5999999999888887776543 2457888899886430
Q ss_pred ---CCCceeEEecchh-------hhcCChhhHHHHH-----------HHHHhcC--CCCcEEEEE
Q 023787 227 ---ETGRYDVIWVQWC-------IGHLTDDDFVSFF-----------KRAKVGL--KPGGFFVLK 268 (277)
Q Consensus 227 ---~~~~fD~Vi~~~~-------l~~~~~~d~~~~l-----------~~~~r~L--kpGG~lii~ 268 (277)
.-++.|+++.+-. +..++.+++...+ +.+...| +.+|.++..
T Consensus 78 ~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVni 142 (254)
T 4fn4_A 78 TFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNT 142 (254)
T ss_dssp HHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 1157899886532 3344555554332 3444444 246777765
No 489
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=64.79 E-value=12 Score=31.41 Aligned_cols=87 Identities=11% Similarity=-0.009 Sum_probs=53.2
Q ss_pred ccEEEeeccc-c-HHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023787 159 LVALDCGSGI-G-RITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (277)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~~--~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~V 234 (277)
.+|.=||||. | .++..+++.+.. +|+++|.++.-++.+.+.+. +... .+..+.. ...|+|
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g------------i~~~-~~~~~~~---~~aDvV 67 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG------------VHTT-QDNRQGA---LNADVV 67 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC------------CEEE-SCHHHHH---SSCSEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC------------CEEe-CChHHHH---hcCCeE
Confidence 5788899984 2 344555555542 69999999988887766431 1111 1211110 246888
Q ss_pred ecchhhhcCChhhHHHHHHHHHhc-CCCCcEEE
Q 023787 235 WVQWCIGHLTDDDFVSFFKRAKVG-LKPGGFFV 266 (277)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~r~-LkpGG~li 266 (277)
+.+-. +.....+++++... ++++-.++
T Consensus 68 ilav~-----p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 68 VLAVK-----PHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp EECSC-----GGGHHHHHHHHHHHHHTTTCEEE
T ss_pred EEEeC-----HHHHHHHHHHHHhhccCCCeEEE
Confidence 86553 34566888888887 77654443
No 490
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=64.44 E-value=16 Score=29.59 Aligned_cols=75 Identities=16% Similarity=0.124 Sum_probs=50.3
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC-
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE- 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 227 (277)
.+.++|-.|++.|. ++..|++.+. +|+++|.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~ 79 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVAD-------GGTAISVAVDVSDPESAKAMADR 79 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHH
Confidence 45678888876652 4555555566 5999999998888776665432 245778889988742 00
Q ss_pred ----CCceeEEecchh
Q 023787 228 ----TGRYDVIWVQWC 239 (277)
Q Consensus 228 ----~~~fD~Vi~~~~ 239 (277)
-+..|+++.+-.
T Consensus 80 ~~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 80 TLAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 136899986654
No 491
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=63.61 E-value=22 Score=28.94 Aligned_cols=75 Identities=13% Similarity=0.099 Sum_probs=50.8
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC-
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE- 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 227 (277)
.+.++|-.|++.|. ++..|++.+. +|+++|.++..++.+.+.+... ..++.++.+|+.+.. ..
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~ 76 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQF-------PGQILTVQMDVRNTDDIQKMIEQ 76 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCS-------TTCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHH
Confidence 34678888876553 3455555565 5999999999888887777543 245788889988742 00
Q ss_pred ----CCceeEEecchh
Q 023787 228 ----TGRYDVIWVQWC 239 (277)
Q Consensus 228 ----~~~fD~Vi~~~~ 239 (277)
-+..|+++.+-.
T Consensus 77 ~~~~~g~id~lv~nAg 92 (257)
T 3imf_A 77 IDEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 136899886543
No 492
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=62.61 E-value=13 Score=32.08 Aligned_cols=102 Identities=14% Similarity=0.052 Sum_probs=57.4
Q ss_pred CCccEEEeecccc--HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCC-------CCCCCCCCC-----cceeEEEcCCC
Q 023787 157 QHLVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAP-------ENHMAPDMH-----KATNFFCVPLQ 222 (277)
Q Consensus 157 ~~~~VLDiGcGtG--~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~-------~~~~~~~~~-----~~~~~~~~d~~ 222 (277)
...+|.-||+|+= .++..++..++. |+.+|++++.++.+.+++.. .+....... .++.+ ..|+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~ 82 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchH
Confidence 4468999999963 344556666775 99999999998887765532 111100000 11222 12222
Q ss_pred CCCCCCCceeEEecchhhhcCChhhHHHHHHHHHhcCCCCcEEE
Q 023787 223 DFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (277)
Q Consensus 223 ~~~~~~~~fD~Vi~~~~l~~~~~~d~~~~l~~~~r~LkpGG~li 266 (277)
+. -...|+|+=+ +.+.+. --.++|+++.++++|+-+|.
T Consensus 83 ~a---~~~ad~ViEa-v~E~l~--iK~~lf~~l~~~~~~~aIla 120 (319)
T 3ado_A 83 EA---VEGVVHIQEC-VPENLD--LKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp HH---TTTEEEEEEC-CCSCHH--HHHHHHHHHHTTCCSSSEEE
T ss_pred hH---hccCcEEeec-cccHHH--HHHHHHHHHHHHhhhcceee
Confidence 11 1246776622 222222 24579999999999987764
No 493
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=62.38 E-value=32 Score=27.81 Aligned_cols=61 Identities=13% Similarity=0.048 Sum_probs=37.6
Q ss_pred CccEEEeeccccH---HHHHHHH---hCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCC
Q 023787 158 HLVALDCGSGIGR---ITKNLLI---RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~---~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 224 (277)
++++|-.|++.|. ++..|++ .+. +|++++.++..++...+.+..... ..++.++.+|+.+.
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~Dv~~~ 72 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQP-----DLKVVLAAADLGTE 72 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCT-----TSEEEEEECCTTSH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCC-----CCeEEEEecCCCCH
Confidence 4577877776553 3344444 344 699999998877766555432100 13577888898764
No 494
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=62.37 E-value=7.6 Score=32.69 Aligned_cols=87 Identities=15% Similarity=0.172 Sum_probs=51.0
Q ss_pred ccEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEec
Q 023787 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (277)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~ 236 (277)
.+|.=||||. | .++..+++.+. +|+++|.++..++.+.+. + +. ...+..+.. ...|+|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~----g---------~~-~~~~~~~~~---~~aDvvi~ 65 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA----G---------AS-AARSARDAV---QGADVVIS 65 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT----T---------CE-ECSSHHHHH---TTCSEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC----C---------Ce-EcCCHHHHH---hCCCeEEE
Confidence 4788899994 3 34555555555 699999999888776653 1 11 111111110 24688776
Q ss_pred chhhhcCChhhHHHHHH---HHHhcCCCCcEEEE
Q 023787 237 QWCIGHLTDDDFVSFFK---RAKVGLKPGGFFVL 267 (277)
Q Consensus 237 ~~~l~~~~~~d~~~~l~---~~~r~LkpGG~lii 267 (277)
+-.- +.....++. .+...+++|..++-
T Consensus 66 ~vp~----~~~~~~v~~~~~~~~~~l~~~~~vi~ 95 (302)
T 2h78_A 66 MLPA----SQHVEGLYLDDDGLLAHIAPGTLVLE 95 (302)
T ss_dssp CCSC----HHHHHHHHHSSSCGGGSSCSSCEEEE
T ss_pred ECCC----HHHHHHHHcCchhHHhcCCCCcEEEE
Confidence 5421 224456666 67777888776543
No 495
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=62.30 E-value=21 Score=27.50 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=27.1
Q ss_pred CCccEEEeeccccHHHHHHHHhCCC-cEEEEeC
Q 023787 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEP 188 (277)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~ 188 (277)
-..-|||+|-|+|+.--++.+..+. +|+++|-
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 4567999999999999988887776 8888884
No 496
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=61.70 E-value=20 Score=29.37 Aligned_cols=74 Identities=14% Similarity=0.038 Sum_probs=45.0
Q ss_pred CccEEEeeccccH---HHHHHHHhCCCcEEEE-eCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-----C-
Q 023787 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (277)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gv-D~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~- 227 (277)
+.+||-.|++.|. ++..|++.+.. |+.+ +.+...++...+.+... ..++.++.+|+.+... .
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~ 97 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWR-VGVNYAANREAADAVVAAITES-------GGEAVAIPGDVGNAADIAAMFSA 97 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCChhHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHH
Confidence 4578877876553 34444545554 7665 77777776665554332 2467888899886430 0
Q ss_pred ----CCceeEEecchh
Q 023787 228 ----TGRYDVIWVQWC 239 (277)
Q Consensus 228 ----~~~fD~Vi~~~~ 239 (277)
-+..|++|.+-.
T Consensus 98 ~~~~~g~id~li~nAg 113 (272)
T 4e3z_A 98 VDRQFGRLDGLVNNAG 113 (272)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHhCCCCCEEEECCC
Confidence 136899886544
No 497
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=61.50 E-value=53 Score=26.01 Aligned_cols=71 Identities=20% Similarity=0.169 Sum_probs=43.0
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----C-C
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P-E 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-~ 227 (277)
++.+||=.|++.|. ++..+++.+. +|++++.++..++...+... ..+++.+|+.+.. + .
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~~~~~~~~ 73 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECP-----------GIEPVCVDLGDWEATERALGS 73 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST-----------TCEEEECCTTCHHHHHHHHTT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcC-----------CCCEEEEeCCCHHHHHHHHHH
Confidence 34678888775442 3334444555 59999999877665544432 2455677877642 1 1
Q ss_pred CCceeEEecchh
Q 023787 228 TGRYDVIWVQWC 239 (277)
Q Consensus 228 ~~~fD~Vi~~~~ 239 (277)
-+.+|+|+.+-.
T Consensus 74 ~~~id~vi~~Ag 85 (244)
T 3d3w_A 74 VGPVDLLVNNAA 85 (244)
T ss_dssp CCCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 246899986543
No 498
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=61.49 E-value=9.7 Score=33.58 Aligned_cols=93 Identities=22% Similarity=0.263 Sum_probs=57.3
Q ss_pred CccEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEecc
Q 023787 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (277)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Vi~~ 237 (277)
+.+||.++-+.|..+..+. .. .+++.+.-|-...+..+.+ ++ . ..+ ... ....+..||+|+..
T Consensus 46 ~~~~l~~n~~~g~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~----~~-----~--~~~-~~~---~~~~~~~~d~v~~~ 108 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLE-GR-MAVERLETSRAAFRCLTAS----GL-----Q--ARL-ALP---WEAAAGAYDLVVLA 108 (381)
T ss_dssp SSEEEESSCTTSTTTGGGB-TT-BEEEEEECBHHHHHHHHHT----TC-----C--CEE-CCG---GGSCTTCEEEEEEE
T ss_pred CCcEEEecCCCCccccccC-CC-CceEEEeCcHHHHHHHHHc----CC-----C--ccc-cCC---ccCCcCCCCEEEEE
Confidence 3689999999998776553 12 2577776665555543332 22 1 111 111 11234689998866
Q ss_pred hhhhcCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023787 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (277)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~r~LkpGG~lii~ 268 (277)
..=+- ........|.++.+.|+|||.+++.
T Consensus 109 ~Pk~k-~~~~~~~~l~~~~~~l~~g~~i~~~ 138 (381)
T 3dmg_A 109 LPAGR-GTAYVQASLVAAARALRMGGRLYLA 138 (381)
T ss_dssp CCGGG-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcch-hHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 54210 0124668899999999999999876
No 499
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=61.45 E-value=18 Score=30.29 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=51.1
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCCC-----C-
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~- 227 (277)
.+.+||-.|++.|. ++..|+++++ +|++++.++.-++.+.+.+... ..++.++.+|+.+... .
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQ-------GFDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhc-------CCceEEEEccCCCHHHHHHHHHH
Confidence 45688888887663 4455555566 5999999998888777665432 2357888899887430 0
Q ss_pred ----CCceeEEecchh
Q 023787 228 ----TGRYDVIWVQWC 239 (277)
Q Consensus 228 ----~~~fD~Vi~~~~ 239 (277)
-+..|++|.+-.
T Consensus 102 ~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHSSCSEEEECCC
T ss_pred HHHhCCCCCEEEECCC
Confidence 136899986644
No 500
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=61.42 E-value=30 Score=28.66 Aligned_cols=75 Identities=16% Similarity=0.104 Sum_probs=50.6
Q ss_pred CCccEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhCCCCCCCCCCCcceeEEEcCCCCCC-----CC-
Q 023787 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE- 227 (277)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 227 (277)
.+.++|-.|++.|. ++..|++.+. +|+++|.++..++...+.+... ..++.++.+|+.+.. ..
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~ 98 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGA-------GGQAIALEADVSDELQMRNAVRD 98 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHH
Confidence 35678888876653 3444555566 5999999998888877776543 245778889988742 00
Q ss_pred ----CCceeEEecchh
Q 023787 228 ----TGRYDVIWVQWC 239 (277)
Q Consensus 228 ----~~~fD~Vi~~~~ 239 (277)
-+..|+++.+-.
T Consensus 99 ~~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 99 LVLKFGHLDIVVANAG 114 (283)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCCEEEECCC
Confidence 137899886544
Done!