BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023789
(277 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297847644|ref|XP_002891703.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297337545|gb|EFH67962.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 309
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 156/274 (56%), Positives = 194/274 (70%), Gaps = 8/274 (2%)
Query: 4 KPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKEN 63
+P P W AWL P+I + F TM+VN+CPA+ S +C+L D+LGR SFQP KEN
Sbjct: 24 RPPIPVPWVAWLVPLILAANFVTFATTMYVNDCPAR---SDECLLFDVLGRLSFQPIKEN 80
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LLGPSI TLR LG L+R L V + +++RL+S +WLH G +HL+ NM SLM + RLEQE
Sbjct: 81 MLLGPSIPTLRKLGALERRL-VEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQE 139
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI LY++SG GGSL+SCL + E VSVGASGALFGLLG MLSELI NWTIY N
Sbjct: 140 FGFMRIGALYVISGLGGSLMSCL-TDSQGERVSVGASGALFGLLGAMLSELITNWTIYEN 198
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
KCT+L L +I LNL+ GF+P VDN AH GGF +G LGF+L LRPQYGYVS KYI
Sbjct: 199 KCTALMTLVLIIVLNLSVGFLP---RVDNSAHFGGFLAGFFLGFVLLLRPQYGYVSPKYI 255
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLGYIT 277
GYD KH++ K+ YQ + +L +L++G+I
Sbjct: 256 PPGYDMKHKKSKHKCYQHILMYTSLAVLLVGFIA 289
>gi|297743435|emb|CBI36302.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/266 (57%), Positives = 191/266 (71%), Gaps = 7/266 (2%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+ W WL PV F+ + FVY+M+VNNCP KT + +CV LGR+SFQP EN L GP
Sbjct: 31 KSWFPWLVPVFFMANVATFVYSMYVNNCPEKTG-ADRCVFNSYLGRFSFQPLSENPLFGP 89
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL LG L++ L+V++ +++RL+S +WLHAG IHL+ NM SL+ + +LEQEFGF R
Sbjct: 90 SPTTLEKLGALEKKLVVQEGEEWRLVSCIWLHAGAIHLIANMLSLLFIGVKLEQEFGFLR 149
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LY++SGFGGSLLS LH ++ +SVGASGALFGLLG MLSEL NWTIYANKC +L
Sbjct: 150 IGLLYVISGFGGSLLSALH---LQKSISVGASGALFGLLGAMLSELFMNWTIYANKCAAL 206
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L V+ LNLA GF+P VD+ AHIGGF SG LLGFIL +RPQYGYVS KYI GYD
Sbjct: 207 MTLMFVVVLNLAVGFLP---HVDSSAHIGGFLSGFLLGFILLVRPQYGYVSRKYIPPGYD 263
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLG 274
K + K+ YQ L W+ AL+ L+ G
Sbjct: 264 GKRVKSKHKWYQYLLWVAALVALIFG 289
>gi|15219034|ref|NP_175667.1| RHOMBOID-like protein 5 [Arabidopsis thaliana]
gi|5903047|gb|AAD55606.1|AC008016_16 F6D8.20 [Arabidopsis thaliana]
gi|332194705|gb|AEE32826.1| RHOMBOID-like protein 5 [Arabidopsis thaliana]
Length = 309
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 155/274 (56%), Positives = 193/274 (70%), Gaps = 8/274 (2%)
Query: 4 KPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKEN 63
+P P W AWL P+I + F TM+VN+CPA+ S +C+L D+LGR SFQP KEN
Sbjct: 24 RPPIPVPWVAWLVPLILAANFVTFATTMYVNDCPAR---SDECLLFDVLGRLSFQPIKEN 80
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LLGPSI TLR LG L+R L V + +++RL+S +WLH G +HL+ NM SLM + RLEQE
Sbjct: 81 MLLGPSIPTLRKLGALERRL-VEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQE 139
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI LY++SG GGSL+SCL + E VSVGASGALFGLLG MLSELI NWTIY N
Sbjct: 140 FGFMRIGALYVISGLGGSLVSCL-TDSQGERVSVGASGALFGLLGAMLSELITNWTIYEN 198
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
KCT+L L +I LNL+ GF+P VDN AH GGF +G LGF+L LRPQYGYV+ KYI
Sbjct: 199 KCTALMTLILIIVLNLSVGFLP---RVDNSAHFGGFLAGFFLGFVLLLRPQYGYVNPKYI 255
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLGYIT 277
GYD KH++ K+ YQ + +L +L+ G+I
Sbjct: 256 PPGYDMKHKKSKHKCYQHIFRFTSLAILLAGFIA 289
>gi|356557245|ref|XP_003546928.1| PREDICTED: rhomboid-related protein 3-like [Glycine max]
Length = 324
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/277 (54%), Positives = 196/277 (70%), Gaps = 14/277 (5%)
Query: 8 PEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLG 67
P W WL P+IF+ I MFVYTM+ N+CPA D C+ LGR+SFQP++EN LLG
Sbjct: 29 PSMWFPWLVPLIFLATIAMFVYTMYENDCPAYL-DEEVCLFSQYLGRFSFQPFRENPLLG 87
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+I TLR LG L++ L+V +N+ +R S M+LHAG++HL+ NM SL+ + RLE+EFGF
Sbjct: 88 PAIRTLRLLGALEKELVVDQNEVWRFFSCMFLHAGVVHLLANMFSLLFIGVRLEKEFGFL 147
Query: 128 RIAPLYLLSGFGGSLLSCLHHK-GKKEIVSVGASGALFGLLGTMLSELIANWTIYANK-- 184
+I LY+LSGFGGS+LS LH K + VSVGASGALFGLLG MLSEL+ NW+IYANK
Sbjct: 148 KIGLLYVLSGFGGSVLSVLHLKESEANTVSVGASGALFGLLGAMLSELLTNWSIYANKVL 207
Query: 185 ------CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYV 238
C +L+ L ++ LNLA GF+P VDN AH+GGF +G LGF+L +RPQYGYV
Sbjct: 208 YPCLLQCAALTSLLIIVGLNLAVGFLP---HVDNSAHVGGFLAGYFLGFVLLMRPQYGYV 264
Query: 239 SEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ KYI GYD K R+ KY YQ I+++I+L+LGY
Sbjct: 265 NRKYIPPGYDVK-RKSKYKWYQYFFLIMSVIILLLGY 300
>gi|317106731|dbj|BAJ53227.1| JHL06P13.7 [Jatropha curcas]
Length = 311
Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 189/268 (70%), Gaps = 7/268 (2%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
EQW WL P+IF + MF+YTM+ N+CP T + +C+ + LGRYSFQP+KEN +LGP
Sbjct: 31 EQWTPWLVPLIFAANVTMFIYTMYDNDCPTYTG-TDKCLFYEYLGRYSFQPFKENAVLGP 89
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S+ TL LG LD + R + +R S +WLHAG++HL+ NM SL+ + LEQEFGF R
Sbjct: 90 SVITLELLGALDPLRVERNGEAWRFFSCIWLHAGVLHLLTNMISLLFIGIPLEQEFGFLR 149
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LY++SGFGGSL+S L + +SVGASGALFGLLG+MLSEL NWT Y NKC ++
Sbjct: 150 IGLLYVMSGFGGSLMSALSPEPN---ISVGASGALFGLLGSMLSELFLNWTTYVNKCKAV 206
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
+ L +I LNL+FG IP VDN AHIGGF SG LLGFIL +RPQYGYVS +YI AGYD
Sbjct: 207 TSLLLIIGLNLSFGLIP---HVDNSAHIGGFLSGFLLGFILLMRPQYGYVSRRYIPAGYD 263
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGYI 276
++PK+ YQ L +IIA + L+ Y+
Sbjct: 264 MIKKKPKHKCYQYLLFIIASVALIFWYL 291
>gi|124359588|gb|ABD28718.2| Protein secE/sec61-gamma protein; Rhomboid-like protein [Medicago
truncatula]
Length = 324
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/276 (54%), Positives = 193/276 (69%), Gaps = 15/276 (5%)
Query: 10 QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPS 69
QW +WL P+ F+ I MFVY+M++N+CP + C+ LG++SFQP+ EN LLGPS
Sbjct: 30 QWFSWLVPLFFLANIAMFVYSMYINDCPGYL-NEDDCLWYQYLGKFSFQPFNENPLLGPS 88
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
+ TLR LG L+R+L+V +N+ +R ++ M+LHAG+IHL+ NM SL+ + RLE EFGF +I
Sbjct: 89 VRTLRVLGALERDLVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLKI 148
Query: 130 APLYLLSGFGGSLLSCLHHKGKK--EIVSVGASGALFGLLGTMLSELIANWTIYANK--- 184
LYLLSGFGGSLLS LH K VSVGASGALFGLLG MLSEL+ NWTIY NK
Sbjct: 149 GVLYLLSGFGGSLLSILHMGDVKAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKGEK 208
Query: 185 -----CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
+L+ L +I LNLA GFIP VDN AHIGGF SG LGF++ +RPQ+GYV+
Sbjct: 209 PLTVQFKALTSLLLIIGLNLAVGFIP---HVDNSAHIGGFLSGFFLGFVILMRPQFGYVN 265
Query: 240 EKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
KYI GYDAK R+ KY YQ ++++I L++GY
Sbjct: 266 NKYIPPGYDAK-RKSKYKGYQYFFLVLSVITLLIGY 300
>gi|357455203|ref|XP_003597882.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
gi|355486930|gb|AES68133.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
Length = 345
Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/297 (50%), Positives = 194/297 (65%), Gaps = 36/297 (12%)
Query: 10 QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPS 69
QW +WL P+ F+ I MFVY+M++N+CP + C+ LG++SFQP+ EN LLGPS
Sbjct: 30 QWFSWLVPLFFLANIAMFVYSMYINDCPGYL-NEDDCLWYQYLGKFSFQPFNENPLLGPS 88
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
+ TLR LG L+R+L+V +N+ +R ++ M+LHAG+IHL+ NM SL+ + RLE EFGF +I
Sbjct: 89 VRTLRVLGALERDLVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLKI 148
Query: 130 APLYLLSGFGGSLLSCLHHKGKK--EIVSVGASGALFGLLGTMLSELIANWTIYANK--- 184
LYLLSGFGGSLLS LH K VSVGASGALFGLLG MLSEL+ NWTIY NK
Sbjct: 149 GVLYLLSGFGGSLLSILHMGDVKAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKVLY 208
Query: 185 --------------------------CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGG 218
C +L+ L +I LNLA GFIP VDN AHIGG
Sbjct: 209 NDIFCCLERKREKIHGVGVCAKGQCSCAALTSLLLIIGLNLAVGFIP---HVDNSAHIGG 265
Query: 219 FASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
F SG LGF++ +RPQ+GYV+ KYI GYDAK R+ KY YQ ++++I L++GY
Sbjct: 266 FLSGFFLGFVILMRPQFGYVNNKYIPPGYDAK-RKSKYKGYQYFFLVLSVITLLIGY 321
>gi|255553147|ref|XP_002517616.1| KOM, putative [Ricinus communis]
gi|223543248|gb|EEF44780.1| KOM, putative [Ricinus communis]
Length = 303
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/268 (60%), Positives = 203/268 (75%), Gaps = 8/268 (2%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
E+WR+WL PVIF V I +FVYTM+VN+CPAKT + +C+L D+LGR+SFQP +EN +LGP
Sbjct: 32 EKWRSWLVPVIFSVNITIFVYTMYVNDCPAKTG-ADKCLLYDLLGRFSFQPLQENAVLGP 90
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S+ TL LG LD IV+ + +R S +WLHAG++HL NM SL+ + RLE+EFGF R
Sbjct: 91 SVITLERLGALDPMAIVKNGEAWRFFSCIWLHAGVVHLFTNMISLLFIGIRLEEEFGFLR 150
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LY+LSGFGGSL+S L +K +SVGASGAL GLLG+MLSEL+ NWTIYANKC+++
Sbjct: 151 IGLLYVLSGFGGSLMSSLR---RKPSISVGASGALLGLLGSMLSELLMNWTIYANKCSAI 207
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
S L +IALNLAFG IP VDN AHIGGF SG LLGFIL +RPQYGYVS +YI GY+
Sbjct: 208 STLLLIIALNLAFGLIP---HVDNSAHIGGFLSGFLLGFILLMRPQYGYVSSRYIPVGYN 264
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGYI 276
K ++ K+ YQ L I AL++L++GYI
Sbjct: 265 IK-KKSKHKCYQYLLLITALVVLIVGYI 291
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 273 bits (697), Expect = 8e-71, Method: Composition-based stats.
Identities = 128/275 (46%), Positives = 188/275 (68%), Gaps = 10/275 (3%)
Query: 1 MENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPW 60
+ +PY +W W+ I + C+++F+ +M+VN+CP + +S C LGR++FQP
Sbjct: 29 LRARPYY-RRWTPWIVAAIALSCVVVFLVSMYVNDCPRR--NSGDCA-AGFLGRFAFQPL 84
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
KEN LLGPS +TL +G LD +V +Q +RL++ +WLHAG++HL++NM L+ + RL
Sbjct: 85 KENPLLGPSSATLLKMGALDVTKVVHGHQGWRLITCIWLHAGVVHLLINMLCLLFIGIRL 144
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
EQEFGF RI +YL+SG GGSL+S L + +SVGASGALFGL+G+MLSELI NW++
Sbjct: 145 EQEFGFVRIGLVYLISGLGGSLMSALFIRSS---ISVGASGALFGLIGSMLSELITNWSL 201
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
YANK +L L VI +NLA G +P VDN AHIGG SG LLGF++F+RPQ+ ++++
Sbjct: 202 YANKVAALLTLVFVIVVNLALGILP---RVDNFAHIGGLISGFLLGFVMFIRPQFAWINQ 258
Query: 241 KYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ +A G + K+ YQ + W+ A I+L++G+
Sbjct: 259 RRVAPGQQPAPVKRKHKTYQYILWLAAAIMLIVGF 293
>gi|42569431|ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|110737035|dbj|BAF00472.1| hypothetical protein [Arabidopsis thaliana]
gi|330253108|gb|AEC08202.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 389
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/274 (51%), Positives = 187/274 (68%), Gaps = 12/274 (4%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWK 61
E +P+ + W WL P I V I +F +M +NNCP +A C+ R LGR++FQP K
Sbjct: 47 EFRPF--KLWFPWLVPAIVVANIALFAISMFINNCPKNSA---YCLAR-FLGRFAFQPMK 100
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
EN LLGPS TL +G LD +++V K++ +RL + +WLHAG+ H++ NM SL+ + RLE
Sbjct: 101 ENPLLGPSSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLE 160
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
QEFGF RI LY++SGFGGSLLS L ++ +SVGASGALFGLLG MLSEL+ NWTIY
Sbjct: 161 QEFGFVRIGLLYMISGFGGSLLSSLFNRAG---ISVGASGALFGLLGAMLSELLTNWTIY 217
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
ANK +L L +IA+NLA G +P VDN AH+GGF SG LLGF+ +RPQYGY +++
Sbjct: 218 ANKFAALLTLIFIIAINLAVGILP---HVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQR 274
Query: 242 YIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
GY A + K+ YQ + WI +L+LL+ GY
Sbjct: 275 NNPRGYAAPSAKSKHKPYQYVLWITSLVLLIAGY 308
>gi|115480259|ref|NP_001063723.1| Os09g0525900 [Oryza sativa Japonica Group]
gi|52076044|dbj|BAD46497.1| putative membrane protein [Oryza sativa Japonica Group]
gi|52077312|dbj|BAD46353.1| putative membrane protein [Oryza sativa Japonica Group]
gi|113631956|dbj|BAF25637.1| Os09g0525900 [Oryza sativa Japonica Group]
gi|125564435|gb|EAZ09815.1| hypothetical protein OsI_32104 [Oryza sativa Indica Group]
gi|125606379|gb|EAZ45415.1| hypothetical protein OsJ_30065 [Oryza sativa Japonica Group]
gi|215700990|dbj|BAG92414.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765558|dbj|BAG87255.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 323
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/269 (50%), Positives = 185/269 (68%), Gaps = 10/269 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P + V CI +F+ M+VNNCP + CV L R+SFQP +EN LLGP
Sbjct: 32 RKWWPWLVPTVIVACIAVFIVEMYVNNCPKHGSALGGCV-AGFLRRFSFQPLRENPLLGP 90
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL+ +G LD N +V ++Q +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+FGF R
Sbjct: 91 SSATLQKMGALDWNKVVHQHQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVR 150
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSELI NWTIY+NK ++
Sbjct: 151 IGAIYLLSGFGGSVLSALFL--RNNYISVGASGALFGLLGSMLSELIMNWTIYSNKAAAI 208
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IA+NLA G +P DN AHIGGF +G LLGF+L RPQ+G++ +
Sbjct: 209 ITLLFIIAINLAIGILP---HADNFAHIGGFVTGFLLGFVLLARPQFGWMERHEL----P 261
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGYIT 277
++ PKY YQ + W++A +LL++G++
Sbjct: 262 QTNQPPKYKAYQYVLWVVAFVLLLVGFVV 290
>gi|225434919|ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 391
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 143/274 (52%), Positives = 191/274 (69%), Gaps = 12/274 (4%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWK 61
E +P+ ++W W+ P V I MF+ TM +NNCP +S CV D LGR+SFQP K
Sbjct: 49 EFRPF--KRWFPWMVPTFVVANIAMFLITMFINNCPK---NSVSCV-ADFLGRFSFQPLK 102
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
EN LLGPS STL +G L+ + +V ++Q +RL+S +WLHAG+ H++ NM SL+ + RLE
Sbjct: 103 ENPLLGPSSSTLEKMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLE 162
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
QEFGF RI LY++SGFGGS+LS L + +SVGASGALFGLLG MLSELI NWTIY
Sbjct: 163 QEFGFVRIGLLYVVSGFGGSMLSSLFIQSS---ISVGASGALFGLLGGMLSELITNWTIY 219
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
ANK +L L +I +NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G+VS++
Sbjct: 220 ANKFAALLTLILIIIVNLAVGILP---HVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQR 276
Query: 242 YIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ G+ A +PK+ YQ + W+++LILL +G+
Sbjct: 277 NASPGHIAPSVKPKHKMYQYVLWVMSLILLTVGF 310
>gi|224104429|ref|XP_002313433.1| predicted protein [Populus trichocarpa]
gi|222849841|gb|EEE87388.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 139/267 (52%), Positives = 185/267 (69%), Gaps = 10/267 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+ W WL P+ V + +F+ M+VN+CP+ +S CV LGR+SFQP KEN LLGP
Sbjct: 1 KNWVPWLVPLFVVANVAVFIAVMYVNDCPS---NSGSCVAPS-LGRFSFQPLKENPLLGP 56
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL +G LD N +V K+Q +RL+S +WLHAG+ H++ NM SL+ + RLEQEFGF R
Sbjct: 57 SSSTLEKMGALDVNRVVHKHQSWRLISCIWLHAGVFHVLANMLSLLFIGIRLEQEFGFLR 116
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+ +Y++SGFGGSLLS L + +SVGASGALFGLLG MLSELI NWTIYANK +L
Sbjct: 117 VGLVYVISGFGGSLLSALFIQTG---ISVGASGALFGLLGGMLSELITNWTIYANKFAAL 173
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IA+NLA G +P VDN AHIGGF SG LGF+ +RPQ+ ++++K GY
Sbjct: 174 LTLLCIIAVNLAVGLLP---HVDNFAHIGGFLSGFFLGFVFLIRPQFKWINQKTCPPGYI 230
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGY 275
A Q K+ YQ + W+I+LI+L++G+
Sbjct: 231 APPAQSKHQTYQYVLWVISLIVLIIGF 257
>gi|356504274|ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 385
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 137/266 (51%), Positives = 186/266 (69%), Gaps = 10/266 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W +WL P+ V I+MFV TM+VNNCP +S C+ LGR+SFQP+KEN LLGP
Sbjct: 48 RKWFSWLIPLFVVANIVMFVITMYVNNCPR---NSVSCI-ASFLGRFSFQPFKENPLLGP 103
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TL+ +G LD + +V ++Q +RL++ MWLHAG+ HL+ NM ++++ RLEQEFGF
Sbjct: 104 SSLTLQKMGALDVSRVVHRHQGWRLITCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVL 163
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I L+++SGFGGSLLS L + +SVGASGALFGLLG MLSELI NW+IY NK T+L
Sbjct: 164 IGLLFVISGFGGSLLSALFIQSN---ISVGASGALFGLLGGMLSELITNWSIYDNKLTAL 220
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +I +NLA G +P VDN AHIGGF +G LLGF+ +RPQ+G+V+++Y Y
Sbjct: 221 LTLVIIIVINLAVGILP---HVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYS 277
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLG 274
+PK+ YQ + W+ +LI+LV+G
Sbjct: 278 PGRVKPKFKKYQCILWVFSLIILVVG 303
>gi|147818034|emb|CAN64890.1| hypothetical protein VITISV_021082 [Vitis vinifera]
Length = 391
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/274 (52%), Positives = 191/274 (69%), Gaps = 12/274 (4%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWK 61
E +P+ ++W W+ P V I MF+ TM +NNCP +S CV D LGR+SFQP K
Sbjct: 49 EFRPF--KRWFPWMVPTFVVANIAMFLITMFINNCPK---NSVSCV-ADFLGRFSFQPLK 102
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
EN LLGPS STL +G L+ + +V ++Q +RL+S +WLHAG+ H++ NM SL+ + RLE
Sbjct: 103 ENPLLGPSSSTLEKMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLE 162
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
QEFGF RI LY++SGFGGS+LS L + +SVGASGALFGLLG MLSELI NWTIY
Sbjct: 163 QEFGFVRIGLLYVVSGFGGSMLSSLFIQSS---ISVGASGALFGLLGGMLSELITNWTIY 219
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
ANK +L L +I +NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G+VS++
Sbjct: 220 ANKFAALLTLILIIIVNLAVGILP---HVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQR 276
Query: 242 YIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ G+ A +PK+ YQ + W+++LILL +G+
Sbjct: 277 NASPGHIAXSVKPKHKMYQYVLWVMSLILLTVGF 310
>gi|110430670|gb|ABG73460.1| membrane protein [Oryza brachyantha]
Length = 326
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/269 (50%), Positives = 184/269 (68%), Gaps = 10/269 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P + V CI +F+ M+VNNCP + CV L R+SFQP +EN LLGP
Sbjct: 35 RKWWPWLVPTVIVACIAVFIVEMYVNNCPKHGSALGGCV-AGFLRRFSFQPLRENPLLGP 93
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TL+ +G LD N +V ++Q +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+FGF R
Sbjct: 94 SSPTLQKMGALDWNKVVHQHQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVR 153
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSELI NWTIY+NK ++
Sbjct: 154 IGAIYLLSGFGGSVLSALFL--RNNYISVGASGALFGLLGSMLSELIMNWTIYSNKAAAI 211
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IA+NLA G +P DN AHIGGF +G LLGF+L RPQ+G++ +
Sbjct: 212 ITLLFIIAINLAIGILP---HADNFAHIGGFVTGFLLGFVLLARPQFGWMERHEL----P 264
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGYIT 277
++ PKY YQ + W++A +LL++G++
Sbjct: 265 QTNQPPKYKAYQYVLWVVAFVLLLVGFVV 293
>gi|255584755|ref|XP_002533096.1| KOM, putative [Ricinus communis]
gi|223527108|gb|EEF29288.1| KOM, putative [Ricinus communis]
Length = 408
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/274 (51%), Positives = 190/274 (69%), Gaps = 9/274 (3%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWK 61
E +P+ +W WL P+ +++FV TM+VNNCP+ + C+ + LGR+SFQP K
Sbjct: 61 EFRPF--RRWLPWLVPLFVGANVVLFVTTMYVNNCPSNSMKPESCIAK-FLGRFSFQPMK 117
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
EN LLGPS STL +G LD + +V +Q +RLLS MWLHAG+ H++ NM SL+ + RLE
Sbjct: 118 ENPLLGPSSSTLEKMGALDVDKVVDGHQAWRLLSCMWLHAGVFHILANMLSLVFIGIRLE 177
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
QEFGF RI +Y++SGFGGSLLS L + +SVGASGALFGLLG MLSELI NWTIY
Sbjct: 178 QEFGFIRIGLVYVISGFGGSLLSALFIQSN---ISVGASGALFGLLGGMLSELITNWTIY 234
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
ANK +L L +I +NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G+V++K
Sbjct: 235 ANKLAALLTLVLIIIINLAVGILP---HVDNFAHIGGFFSGFLLGFVFLIRPQFGWVNQK 291
Query: 242 YIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
GY A + K+ YQ + W++++ILL++G+
Sbjct: 292 ACPPGYIAPPAKSKHKTYQYVLWVVSVILLIVGF 325
>gi|224054696|ref|XP_002298351.1| predicted protein [Populus trichocarpa]
gi|222845609|gb|EEE83156.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/267 (52%), Positives = 186/267 (69%), Gaps = 10/267 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
++W WL P+ V I +F+ M+VN+CP +S CV LGR+SFQP KEN LLGP
Sbjct: 37 KKWVPWLVPLFVVSNIAVFIAVMYVNDCPT---NSGSCVAPS-LGRFSFQPLKENPLLGP 92
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL +G LD +V K+Q +RL+S +WLHAG+ H+V NM SL+L+ RLEQEFGF R
Sbjct: 93 SSSTLVKMGALDVARVVNKHQSWRLISCIWLHAGVFHVVANMLSLLLIGIRLEQEFGFFR 152
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +Y++SGFGGSLLS L + +SVGASGALFGLLG MLSELI NWTIYANK +L
Sbjct: 153 IGLVYVISGFGGSLLSALFIQTG---ISVGASGALFGLLGGMLSELITNWTIYANKSAAL 209
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
+ L +IA+NLA G +P VDN AHIGGF SG LGF+ +RPQ+ ++++K GY
Sbjct: 210 TTLLCIIAINLAVGLLP---HVDNYAHIGGFLSGFFLGFVFLIRPQFKWINQKACPPGYI 266
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGY 275
A + K+ YQ + W+++LI++++G+
Sbjct: 267 APPAKSKHKAYQYVLWVVSLIVIIIGF 293
>gi|297822631|ref|XP_002879198.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
gi|297325037|gb|EFH55457.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 185/274 (67%), Gaps = 12/274 (4%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWK 61
E +P+ + W WL P I V I +F +M +NNCP +A C R LGR++FQP K
Sbjct: 45 EFRPF--KLWFPWLVPAIVVANIALFAISMFINNCPKNSA---YCSAR-FLGRFAFQPMK 98
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
EN LLGPS TL +G LD +++V K++ +RL + +WLHAG+ H++ NM SL+ + RLE
Sbjct: 99 ENPLLGPSSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLE 158
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
QEFGF RI LY++SGFGGSLLS L ++ +SVGASGALFGLLG MLSEL+ NWTIY
Sbjct: 159 QEFGFVRIGLLYMISGFGGSLLSSLFNRAG---ISVGASGALFGLLGAMLSELLTNWTIY 215
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
ANK +L L +IA+NLA G +P VDN AH+GGF SG LLGF+ +RPQYGY +++
Sbjct: 216 ANKFAALLTLIFIIAINLAVGILP---HVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQR 272
Query: 242 YIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
Y A + K+ YQ + WI +L+LL+ GY
Sbjct: 273 NNPRSYAAPSAKSKHKPYQYVLWITSLLLLIAGY 306
>gi|363807474|ref|NP_001242137.1| uncharacterized protein LOC100805186 [Glycine max]
gi|255644920|gb|ACU22960.1| unknown [Glycine max]
Length = 384
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 136/266 (51%), Positives = 183/266 (68%), Gaps = 10/266 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W AWL P+ V + MF TM+VNNCP +S C+ LGR+SFQP+KEN LLGP
Sbjct: 47 RKWFAWLIPLFVVANVAMFAITMYVNNCPR---NSVSCI-ASFLGRFSFQPFKENPLLGP 102
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TL+ +G LD + +V K+Q +RL++ MWLHAG+ HL+ NM ++++ RLEQEFGF
Sbjct: 103 SSLTLQKMGALDVSRVVHKHQGWRLVTCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVL 162
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I L+ +SGFGGSLLS L + +SVGASGALFGLLG MLSELI NW+IY NK +L
Sbjct: 163 IGLLFFISGFGGSLLSALFIQSN---ISVGASGALFGLLGGMLSELITNWSIYDNKLAAL 219
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +I +NLA G +P VDN AHIGGF +G LLGF+ +RPQ+G+V+++Y Y
Sbjct: 220 LTLVIIIVINLAVGILP---HVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYS 276
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLG 274
+PK+ YQ + W+++LI+LV+G
Sbjct: 277 PGRSKPKFKKYQCILWVLSLIILVVG 302
>gi|147810722|emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]
Length = 754
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/260 (52%), Positives = 183/260 (70%), Gaps = 11/260 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
++W WL P V IIMF TM+VNNCP +S C+ D LGR+SFQP+KEN LLGP
Sbjct: 52 KKWVPWLIPSFVVANIIMFGITMYVNNCPK---NSISCIA-DFLGRFSFQPFKENPLLGP 107
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL+ +G LD + +V ++Q +RL++ +WLH G+ HL+ NM SL+++ RLEQEFGF +
Sbjct: 108 SSSTLQKMGALDVSRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVK 167
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+ LY++SGFGGSLLS L +E +SVGASGALFGLLG MLSELI NW+IYANK +
Sbjct: 168 VGLLYVISGFGGSLLSGLF---IQENISVGASGALFGLLGGMLSELITNWSIYANKLAAF 224
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IA+NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G+VS+ Y A+
Sbjct: 225 LTLVIIIAINLAVGILP---HVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQIY-ASPEH 280
Query: 249 AKHRQPKYMHYQQLCWIIAL 268
+ +PK+ YQ + W+ ++
Sbjct: 281 STSPKPKFKTYQCILWVASV 300
>gi|145329975|ref|NP_001077973.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|77999982|dbj|BAE46872.1| Rhomboid family protein AtRBL1 [Arabidopsis thaliana]
gi|330253109|gb|AEC08203.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 346
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 188/304 (61%), Gaps = 40/304 (13%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWK 61
E +P+ + W WL P I V I +F +M +NNCP +A C+ R LGR++FQP K
Sbjct: 47 EFRPF--KLWFPWLVPAIVVANIALFAISMFINNCPKNSA---YCLAR-FLGRFAFQPMK 100
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
EN LLGPS TL +G LD +++V K++ +RL + +WLHAG+ H++ NM SL+ + RLE
Sbjct: 101 ENPLLGPSSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLE 160
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
QEFGF RI LY++SGFGGSLLS L ++ +SVGASGALFGLLG MLSEL+ NWTIY
Sbjct: 161 QEFGFVRIGLLYMISGFGGSLLSSLFNRAG---ISVGASGALFGLLGAMLSELLTNWTIY 217
Query: 182 ANKCTSLSVLGS----------------------------VIALNLAFGFIPGVDGVDNL 213
ANK S++ +IA+NLA G +P VDN
Sbjct: 218 ANKVAKSSLVKQAALSMNDVSIMSLVFLHLQFAALLTLIFIIAINLAVGILP---HVDNF 274
Query: 214 AHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVL 273
AH+GGF SG LLGF+ +RPQYGY +++ GY A + K+ YQ + WI +L+LL+
Sbjct: 275 AHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWITSLVLLIA 334
Query: 274 GYIT 277
GY +
Sbjct: 335 GYTS 338
>gi|225440378|ref|XP_002270642.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 388
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/260 (52%), Positives = 183/260 (70%), Gaps = 11/260 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
++W WL P V IIMF TM+VNNCP +S C+ D LGR+SFQP+KEN LLGP
Sbjct: 52 KKWVPWLIPSFVVANIIMFGITMYVNNCPK---NSISCI-ADFLGRFSFQPFKENPLLGP 107
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL+ +G LD + +V ++Q +RL++ +WLH G+ HL+ NM SL+++ RLEQEFGF +
Sbjct: 108 SSSTLQKMGALDVSRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVK 167
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+ LY++SGFGGSLLS L +E +SVGASGALFGLLG MLSELI NW+IYANK +
Sbjct: 168 VGLLYVISGFGGSLLSGLF---IQENISVGASGALFGLLGGMLSELITNWSIYANKLAAF 224
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IA+NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G+VS+ Y A+
Sbjct: 225 LTLVIIIAINLAVGILP---HVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQIY-ASPEH 280
Query: 249 AKHRQPKYMHYQQLCWIIAL 268
+ +PK+ YQ + W+ ++
Sbjct: 281 STSPKPKFKTYQCILWVASV 300
>gi|357155676|ref|XP_003577199.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 383
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 186/275 (67%), Gaps = 10/275 (3%)
Query: 1 MENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPW 60
+ +PY +W W+ P V C+ F+ TM VN+CP + LGR++FQP
Sbjct: 38 LRARPYY-RRWTPWVVPAASVACVAAFLVTMFVNDCPRRGVGDCSA---SFLGRFAFQPL 93
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
+EN LLGPS +TL +G LD + IV+ Q +RL++ +WLHAG++HL++N+ L+ + RL
Sbjct: 94 RENPLLGPSSATLLKMGALDVSKIVQGRQGWRLITCIWLHAGVVHLLINVLCLLFIGIRL 153
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
EQEFGF RI +YL+SGFGGSL+S L + +SVGASGALFGL+G+MLSELI NW++
Sbjct: 154 EQEFGFVRIGLVYLISGFGGSLMSALFIRSS---ISVGASGALFGLIGSMLSELITNWSL 210
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
YANK +L L VI +NLA G +P VDN AHIGG SG LLGF++F+RPQ+ ++++
Sbjct: 211 YANKVAALLTLVFVIVVNLALGILP---RVDNFAHIGGLISGFLLGFVVFIRPQFAWINQ 267
Query: 241 KYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
K +A G + + K+ YQ + W+ A++LL++G+
Sbjct: 268 KRVAPGQETAPVKRKHKTYQYILWLAAVVLLIVGF 302
>gi|449452364|ref|XP_004143929.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449495860|ref|XP_004159966.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 327
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/278 (49%), Positives = 179/278 (64%), Gaps = 13/278 (4%)
Query: 2 ENKPY----APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSF 57
PY + +QW WL P+ V I MF+ M+VNNCP + LGR+SF
Sbjct: 24 STSPYYLETSEKQWTPWLVPMFVVANIAMFIVVMYVNNCPDSNLGFGDKCVASFLGRFSF 83
Query: 58 QPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVS 117
QP +EN LLGPS +TL LG L N +V ++Q +RLLS +WLHAGIIHL+ NM SL+L+
Sbjct: 84 QPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRLLSCIWLHAGIIHLLANMLSLVLIG 143
Query: 118 YRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIAN 177
RLEQ+FGF RI +YL++G GGS++S L + +SVGASGALFGLLG MLSEL+ N
Sbjct: 144 IRLEQQFGFVRIGMIYLVAGVGGSVMSSLFIQNN---ISVGASGALFGLLGAMLSELLTN 200
Query: 178 WTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
WTIY NK +L L ++ +NLA G +P VDN AHIGGF +G LLGF+L +RPQ+ +
Sbjct: 201 WTIYTNKVAALFTLIVIVVINLAVGILP---HVDNFAHIGGFLTGFLLGFVLLVRPQFKW 257
Query: 238 VSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
++ G R PKY YQ + W+ A ILLV G+
Sbjct: 258 TERHHLPPG---ARRVPKYKTYQYILWLAAAILLVAGF 292
>gi|226504776|ref|NP_001142335.1| membrane protein [Zea mays]
gi|194708266|gb|ACF88217.1| unknown [Zea mays]
gi|224034285|gb|ACN36218.1| unknown [Zea mays]
gi|414886370|tpg|DAA62384.1| TPA: membrane protein [Zea mays]
Length = 324
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/252 (53%), Positives = 171/252 (67%), Gaps = 10/252 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P + V CI +FV M+ NNCP + CV L R+SFQP +EN LLGP
Sbjct: 33 RKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLGDCV-AGFLRRFSFQPLRENPLLGP 91
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL +G LD N IV +NQ +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+FGF R
Sbjct: 92 SSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVR 151
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSEL+ NWTIY+NK ++
Sbjct: 152 IGAIYLLSGFGGSVLSALFL--RNSYISVGASGALFGLLGSMLSELLMNWTIYSNKAAAI 209
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IALNLA G +P VDN AHIGGFA+G LLGF+L RPQ+ ++ +
Sbjct: 210 ITLLFIIALNLAIGILP---HVDNFAHIGGFATGFLLGFVLLARPQFSWMESHELP---- 262
Query: 249 AKHRQPKYMHYQ 260
++ PKY YQ
Sbjct: 263 HTNQPPKYKAYQ 274
>gi|224074883|ref|XP_002304474.1| predicted protein [Populus trichocarpa]
gi|222841906|gb|EEE79453.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 184/269 (68%), Gaps = 9/269 (3%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
A +QW +W+ P+ V I +F+ M+VN+CP K+ + LGR+SFQP KEN L
Sbjct: 27 AEKQWTSWIIPMFVVANIAVFIVVMYVNDCPKKSLGIEGSCVAKFLGRFSFQPLKENPLF 86
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS +TL +G L+ N +V +Q +RL++ MWLHAG++H++ NM SL+ + RLEQ+FGF
Sbjct: 87 GPSAATLEKMGALEWNKVVHGHQGWRLITCMWLHAGVVHVLANMLSLIFIGIRLEQQFGF 146
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R+ +YL+SGFGGS+LS L ++ +SVGASGALFGLLG MLSEL+ NWTIY+NK
Sbjct: 147 VRVGIIYLVSGFGGSILSSLF---IQQNISVGASGALFGLLGAMLSELLTNWTIYSNKIA 203
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L +IA+NLA G +P VDN AHIGGF SG LLGF+ LRPQ+G+ ++ A
Sbjct: 204 ALLTLVVIIAINLAVGILP---HVDNFAHIGGFMSGFLLGFVFLLRPQFGWAENRHSPA- 259
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLGY 275
DA+ + K+ YQ + + A +LL++G+
Sbjct: 260 -DARVKS-KHKAYQYVLMLAAAVLLIVGF 286
>gi|356566513|ref|XP_003551475.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 385
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/269 (49%), Positives = 180/269 (66%), Gaps = 10/269 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
++W WL P + +I+F+ TM+VN+C A + LGR+SFQP+ EN LLGP
Sbjct: 47 KEWFPWLIPFFVIANVIVFIITMYVNDCSKTLAT----CIAPFLGRFSFQPFNENPLLGP 102
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S+ TLR +G LD N +V ++Q +RL++ MWLH G+ HLV NM L++V +LE+EFGF
Sbjct: 103 SLITLRKMGALDANKVVHRHQGWRLITCMWLHGGVFHLVANMFGLLVVGIQLEKEFGFVL 162
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I L+++SGFGGSLLS L E VSVGASGALFGLLG MLSEL+ NW++Y K +L
Sbjct: 163 IGLLFVISGFGGSLLSALF---IGEKVSVGASGALFGLLGGMLSELLTNWSLYEKKLGAL 219
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
VIA+NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G++ ++ Y
Sbjct: 220 FTFVFVIAINLAVGVLP---HVDNFAHIGGFLSGFLLGFVFLIRPQFGWIKQRNAPQPYS 276
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGYIT 277
+PK+ YQ + WI+ALILL++G+ T
Sbjct: 277 PTLIKPKFNKYQCISWILALILLIVGFTT 305
>gi|414867422|tpg|DAA45979.1| TPA: membrane protein [Zea mays]
Length = 334
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/272 (50%), Positives = 184/272 (67%), Gaps = 13/272 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQ-----CVLRDILGRYSFQPWKEN 63
+W WL P++ V I++F M+VNNCPA A S + CV R L R+SFQP EN
Sbjct: 36 REWVPWLVPLVVAVNIVLFAVAMYVNNCPAHAASSRRGGAGSCVARGFLHRFSFQPLSEN 95
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LLGPS +TL+ LG L + +VR++Q +RL++ +WLHAG+ HL+ NM SL+L+ RLEQ+
Sbjct: 96 PLLGPSSATLQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQ 155
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FG+ R+ +YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIYAN
Sbjct: 156 FGYVRVGIIYLVSGVGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELFTNWTIYAN 212
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L L VIA+NLA G +P VDN AHIGGF +G LLGF+L +RP YG++ ++Y
Sbjct: 213 KAAALVTLLVVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRY- 267
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
A D K+ KY+ YQ +A +L V+G+
Sbjct: 268 ALPSDVKYTTKKYLAYQWALLAVASVLAVIGF 299
>gi|194703068|gb|ACF85618.1| unknown [Zea mays]
gi|195643104|gb|ACG41020.1| membrane protein [Zea mays]
gi|219888419|gb|ACL54584.1| unknown [Zea mays]
gi|224031257|gb|ACN34704.1| unknown [Zea mays]
gi|414591379|tpg|DAA41950.1| TPA: membrane protein [Zea mays]
Length = 327
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/252 (53%), Positives = 170/252 (67%), Gaps = 9/252 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P + V CI +FV M+ NNCP + + L R+SFQP +EN LLGP
Sbjct: 35 RKWWPWLVPTVIVACIAVFVVEMYENNCPKNRSQLGGDCVAGFLRRFSFQPLRENPLLGP 94
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL +G LD N IV +NQ +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+FGF R
Sbjct: 95 SSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVR 154
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSEL+ NWTIY+NK ++
Sbjct: 155 IGAIYLLSGFGGSVLSALFL--RNNYISVGASGALFGLLGSMLSELLMNWTIYSNKAAAI 212
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IALNLA G +P DN AHIGGFA+G LLGF+L RPQ+G++ +
Sbjct: 213 ITLLFIIALNLAIGILP---HADNFAHIGGFATGFLLGFVLLARPQFGWMEHHELP---- 265
Query: 249 AKHRQPKYMHYQ 260
++ PKY YQ
Sbjct: 266 QTNQPPKYKAYQ 277
>gi|195652545|gb|ACG45740.1| membrane protein [Zea mays]
Length = 334
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/272 (50%), Positives = 184/272 (67%), Gaps = 13/272 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQ-----CVLRDILGRYSFQPWKEN 63
+W WL P++ V I++F M+VNNCPA A S + CV R L R+SFQP EN
Sbjct: 36 REWLPWLVPLVVAVNIVLFAVAMYVNNCPAHAASSRRGGAGSCVARGFLHRFSFQPLSEN 95
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LLGPS +TL+ LG L + +VR++Q +RL++ +WLHAG+ HL+ NM SL+L+ RLEQ+
Sbjct: 96 PLLGPSSATLQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQ 155
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FG+ R+ +YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIYAN
Sbjct: 156 FGYVRVGIIYLVSGVGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELFTNWTIYAN 212
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L L VIA+NLA G +P VDN AHIGGF +G LLGF+L +RP YG++ ++Y
Sbjct: 213 KAAALVTLLVVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRY- 267
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
A D K+ KY+ YQ +A +L V+G+
Sbjct: 268 ALPSDVKYTTKKYLAYQWALLAVASVLAVIGF 299
>gi|115486807|ref|NP_001068547.1| Os11g0704800 [Oryza sativa Japonica Group]
gi|62733172|gb|AAX95289.1| Rhomboid family, putative [Oryza sativa Japonica Group]
gi|77552712|gb|ABA95509.1| rhomboid family protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645769|dbj|BAF28910.1| Os11g0704800 [Oryza sativa Japonica Group]
Length = 374
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 188/275 (68%), Gaps = 10/275 (3%)
Query: 1 MENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPW 60
+ +PY +W W+ I + C+++F+ +M+VN+CP + +S C LGR++FQP
Sbjct: 29 LRARPYY-RRWTPWIVAAIALSCVVVFLVSMYVNDCPRR--NSGDCA-AGFLGRFAFQPL 84
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
KEN LLGPS +TL +G LD +V +Q +RL++ +WLHAG++HL++NM L+ + RL
Sbjct: 85 KENPLLGPSSATLLKMGALDVTKVVHGHQGWRLITCIWLHAGVVHLLINMLCLLFIGIRL 144
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
EQEFGF RI +YL+SG GGSL+S L + +SVGASGALFGL+G+MLSELI NW++
Sbjct: 145 EQEFGFVRIGLVYLISGLGGSLMSALFIRSS---ISVGASGALFGLIGSMLSELITNWSL 201
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
YANK +L L VI +NLA G +P VDN AHIGG SG LLGF++F+RPQ+ ++++
Sbjct: 202 YANKVAALLTLVFVIVVNLALGILP---RVDNFAHIGGLISGFLLGFVMFIRPQFAWINQ 258
Query: 241 KYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ +A G + K+ YQ + W+ A I+L++G+
Sbjct: 259 RRVAPGQQPAPVKRKHKTYQYILWLAAAIMLIVGF 293
>gi|326514946|dbj|BAJ99834.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/267 (48%), Positives = 181/267 (67%), Gaps = 9/267 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P + V C+ +FV M VN+CP + + L R+SFQP +EN LLGP
Sbjct: 29 RKWWPWLVPTVIVACVAVFVVEMWVNDCPRHGSALGGGCVAGFLRRFSFQPLRENPLLGP 88
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL +G LD N +V ++Q +RL+S +WLHAG+IHLVV+M SL+ + RLEQ+FGF R
Sbjct: 89 SSTTLGKMGALDWNKVVHQHQGWRLISCIWLHAGLIHLVVDMLSLLFIGIRLEQQFGFVR 148
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +YLLSGFGGS++S L + +SVGASGALFGLLG+MLSEL+ NWTIY+NK ++
Sbjct: 149 IGAIYLLSGFGGSVMSALFL--RNNYISVGASGALFGLLGSMLSELLMNWTIYSNKVAAI 206
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IA+N+A G +P DN AHIGGF +G LLGF+L RPQ+G++ +
Sbjct: 207 ITLLFIIAINVAIGILP---HADNFAHIGGFLTGFLLGFVLLARPQFGWLERSELP---- 259
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGY 275
++ PKY YQ + W++A +LL++G+
Sbjct: 260 HTNQPPKYKPYQYVLWVVAFVLLLVGF 286
>gi|242049912|ref|XP_002462700.1| hypothetical protein SORBIDRAFT_02g030450 [Sorghum bicolor]
gi|241926077|gb|EER99221.1| hypothetical protein SORBIDRAFT_02g030450 [Sorghum bicolor]
Length = 325
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/255 (52%), Positives = 171/255 (67%), Gaps = 10/255 (3%)
Query: 6 YAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYL 65
+ +W WL P + V CI +FV M+ NNCP + CV L R+SFQP +EN L
Sbjct: 31 FEDRKWWPWLVPTVIVACIAVFVVEMYENNCPKNRSQLGGCV-AGFLRRFSFQPLRENPL 89
Query: 66 LGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
LGPS STL +G LD N IV +NQ +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+FG
Sbjct: 90 LGPSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFG 149
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
F RI +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSEL+ NWTIY+NK
Sbjct: 150 FVRIGAIYLLSGFGGSVLSALFL--RNNYISVGASGALFGLLGSMLSELLMNWTIYSNKA 207
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
++ L ++ALNLA G +P DN AHIGGFA+G LLGF+L RPQ+ ++ +
Sbjct: 208 AAIITLLFIVALNLAIGILP---HADNFAHIGGFATGFLLGFVLLARPQFSWMERHELP- 263
Query: 246 GYDAKHRQPKYMHYQ 260
++ PKY YQ
Sbjct: 264 ---QTNQPPKYKAYQ 275
>gi|294845|gb|AAA02747.1| membrane protein [Saccharum hybrid cultivar H65-7052]
Length = 325
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/256 (53%), Positives = 173/256 (67%), Gaps = 12/256 (4%)
Query: 7 APE--QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENY 64
PE +W WL P + V CI +FV M+ NNCP + CV L R+SFQP +EN
Sbjct: 30 GPEDRKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLGGCV-AGFLRRFSFQPLRENP 88
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
LLGPS STL +G LD N IV ++Q +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+F
Sbjct: 89 LLGPSSSTLEKMGALDWNKIVHQDQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQF 148
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
GF RI +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSEL+ NWTIY+NK
Sbjct: 149 GFVRIGAIYLLSGFGGSVLSALFL--RNNYISVGASGALFGLLGSMLSELLMNWTIYSNK 206
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
++ L +IALNLA G +P VDN AHIGGFA+G LLGF+L RPQ+ ++ +
Sbjct: 207 AAAIITLLFIIALNLAIGILP---HVDNFAHIGGFATGFLLGFVLLARPQFSWMERHELP 263
Query: 245 AGYDAKHRQPKYMHYQ 260
++ PKY YQ
Sbjct: 264 ----QTNQPPKYKAYQ 275
>gi|356575933|ref|XP_003556090.1| PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max]
Length = 329
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/272 (50%), Positives = 182/272 (66%), Gaps = 11/272 (4%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSH-QCVLRDILGRYSFQPWKENYL 65
+ W +WL P+ V I +FV TM++NNCP +CV R LGR+SFQP +EN L
Sbjct: 33 SETHWTSWLVPMFVVANIAVFVITMYINNCPRNNLRFQGRCVAR-FLGRFSFQPMQENPL 91
Query: 66 LGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
LGPS STL +G L + +V ++Q +RL + +WLHAG+IHL+ NM SL+ + RLEQ+FG
Sbjct: 92 LGPSSSTLTKMGALRWDNVVNRHQGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
F +I +YL+SGFGGS+LS L ++ +SVGASGALFGLLG MLSELI NWTIY+NK
Sbjct: 152 FIKIGIIYLVSGFGGSVLSSLF---IRDHISVGASGALFGLLGAMLSELITNWTIYSNKA 208
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
+L L +I +NL G +P VDN AHIGGF G LLGFIL RPQ+ ++ ++ + A
Sbjct: 209 MALITLLVIIVINLGIGILP---HVDNFAHIGGFLVGFLLGFILLPRPQFSWLEQRRLPA 265
Query: 246 GYDAKHRQPKYMHYQQLCWIIALILLVLGYIT 277
G K KY YQ + WI++LILL+ G T
Sbjct: 266 GVGMK---SKYKAYQYVLWIVSLILLIAGLST 294
>gi|194688302|gb|ACF78235.1| unknown [Zea mays]
Length = 336
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/272 (49%), Positives = 180/272 (66%), Gaps = 13/272 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQ-----CVLRDILGRYSFQPWKEN 63
+W WL P++ V I++F M+VNNCPA A S CV R L R+SFQP EN
Sbjct: 38 REWVPWLVPLVVAVNIVLFAVAMYVNNCPAHAASSRHGGAGSCVARGFLHRFSFQPLSEN 97
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LLGPS +TL+ LG L + +VR++Q +RL++ +WLHAG+ HL+ NM SL+L+ RLEQ+
Sbjct: 98 PLLGPSSATLQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQ 157
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FG+ R+ +YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIYAN
Sbjct: 158 FGYVRVGIIYLVSGVGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELFTNWTIYAN 214
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L L VIA+NLA G +P VDN AHIGGF +G LLGF+ +RP YG++ +
Sbjct: 215 KAAALVTLLVVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFVFLMRPHYGWMQRYAL 271
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ D K+ KY+ YQ +A +L V+G+
Sbjct: 272 PS--DVKYTTKKYLVYQWALLAVASVLAVIGF 301
>gi|225455416|ref|XP_002279077.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
gi|297741091|emb|CBI31822.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/269 (49%), Positives = 181/269 (67%), Gaps = 9/269 (3%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
+ QW +WL P+ V + +FV M++NNCP + + + LGR+SFQP KEN L
Sbjct: 28 SETQWTSWLVPMFVVANVAVFVVAMYINNCPKENSRVQGKCVAGFLGRFSFQPLKENPLF 87
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS TL LG L+ +V K+Q +RL++ +WLHAGIIHL+VNM SL+L+ RLEQ+FGF
Sbjct: 88 GPSSKTLEKLGALEWKKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGF 147
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
RI +YLLSGFGGS+LS L + +SVGASGALFGLLG MLSELI NW++Y N+
Sbjct: 148 VRIGVIYLLSGFGGSVLSSLFIQNS---ISVGASGALFGLLGAMLSELITNWSMYTNRAA 204
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L ++A+NL G +P V+N AHIGGF +G LGFIL RPQ+G++ + + A
Sbjct: 205 ALLTLLVIVAVNLTVGILP---RVNNFAHIGGFVTGFFLGFILMPRPQFGWIEGRNLPAD 261
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLGY 275
K KY YQ +CW+++L+LL+ G+
Sbjct: 262 VRVKS---KYKAYQYVCWLVSLVLLIAGF 287
>gi|359490352|ref|XP_003634078.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 324
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/269 (49%), Positives = 181/269 (67%), Gaps = 9/269 (3%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
+ QW +WL P+ V + +FV M++NNCP + + + LGR+SFQP KEN L
Sbjct: 27 SETQWTSWLVPMFVVANVAVFVVAMYINNCPKENSRVQGKCVAGFLGRFSFQPLKENPLF 86
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS TL LG L+ +V K+Q +RL++ +WLHAGIIHL+VNM SL+L+ RLEQ+FGF
Sbjct: 87 GPSSKTLEKLGALEWKKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGF 146
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
RI +YLLSGFGGS+LS L + +SVGASGALFGLLG MLSELI NW++Y N+
Sbjct: 147 VRIGVIYLLSGFGGSVLSSLFIQNS---ISVGASGALFGLLGAMLSELITNWSMYTNRAA 203
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L ++A+NL G +P V+N AHIGGF +G LGFIL RPQ+G++ + + A
Sbjct: 204 ALLTLLVIVAVNLTVGILP---RVNNFAHIGGFVTGFFLGFILMPRPQFGWIEGRNLPAD 260
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLGY 275
K KY YQ +CW+++L+LL+ G+
Sbjct: 261 VRVK---SKYKAYQYVCWLVSLVLLIAGF 286
>gi|326504866|dbj|BAK06724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 418
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 190/297 (63%), Gaps = 29/297 (9%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKT-------ADS----------- 43
E +P+ +W +L P+ I +FV TM+VN+CPA DS
Sbjct: 50 EFRPF--RRWFPFLVPLFIAANIALFVRTMYVNDCPAHAAAAAAAIGDSVGGAAGGSAGA 107
Query: 44 ---HQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLH 100
C+L LGRY+FQP+KEN L+GP+ +TL +G L+ + + ++ +RL++ +WLH
Sbjct: 108 AASRGCMLEPDLGRYAFQPYKENPLVGPTSATLLQMGALETGKVAKDHEWWRLITCIWLH 167
Query: 101 AGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGAS 160
AG+IH++ NM SL+++ RLE+EFGF RI LY++SG GGSLLS L +SVGAS
Sbjct: 168 AGVIHILANMLSLLMIGIRLEKEFGFLRIGTLYVISGVGGSLLSALFMVSN---ISVGAS 224
Query: 161 GALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFA 220
GALFGLLG+MLSELI NWTIY NKC +L L +I +NLA G +P VDN AHIGGF
Sbjct: 225 GALFGLLGSMLSELITNWTIYENKCAALLTLVMIIVINLAVGILP---HVDNFAHIGGFV 281
Query: 221 SGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGYIT 277
SG LGF+L +RPQ+GY+++K G + + KY YQ + +IAL++L+ G+IT
Sbjct: 282 SGFFLGFVLLMRPQFGYINQKNSRLGVHSGTTKCKYKPYQIVLLVIALVILICGFIT 338
>gi|115477653|ref|NP_001062422.1| Os08g0546700 [Oryza sativa Japonica Group]
gi|42408095|dbj|BAD09236.1| putative membrane protein [Oryza sativa Japonica Group]
gi|113624391|dbj|BAF24336.1| Os08g0546700 [Oryza sativa Japonica Group]
gi|215686417|dbj|BAG87702.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201559|gb|EEC83986.1| hypothetical protein OsI_30137 [Oryza sativa Indica Group]
gi|222640971|gb|EEE69103.1| hypothetical protein OsJ_28172 [Oryza sativa Japonica Group]
Length = 323
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 134/271 (49%), Positives = 182/271 (67%), Gaps = 14/271 (5%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTAD--SHQCVLRDILGRYSFQPWKENYLL 66
+W WL P + V CI++F+ M VN+CP + CV L +++FQP +EN LL
Sbjct: 30 RRWWPWLVPTVLVACIVVFLVEMFVNDCPRHGSPLRGESCV-AGFLHQFAFQPLRENPLL 88
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS +TL +G LD +V ++Q +RL+S +WLHAG+IHL+VNM SL+ + RLEQ+FGF
Sbjct: 89 GPSSATLEKMGALDWAKVVHQHQAWRLISCIWLHAGLIHLIVNMLSLLFIGLRLEQQFGF 148
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
RI +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSELI NWTIY+NK
Sbjct: 149 VRIGIIYLLSGFGGSVLSVLFL--RNNYISVGASGALFGLLGSMLSELIMNWTIYSNKAA 206
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
++ L +IA+NLA G +P DN AHIGGF +G LLGF+L RPQ+G++ +
Sbjct: 207 AIITLLFIIAINLAIGILP---HADNFAHIGGFVTGFLLGFVLLARPQFGWMERHEL--- 260
Query: 247 YDAKHRQP-KYMHYQQLCWIIALILLVLGYI 276
+ QP KY YQ + W +AL LL++G++
Sbjct: 261 --PQTNQPRKYRAYQYVLWAVALFLLLVGFV 289
>gi|326529191|dbj|BAK00989.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 326
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 176/274 (64%), Gaps = 11/274 (4%)
Query: 6 YAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCP--AKTADSHQCVLRDILGRYSFQPWKEN 63
Y QW WL P + C+ +F M++N+CP T + L ++SFQP +EN
Sbjct: 29 YDERQWWPWLVPTVLGACVSVFAVEMYLNDCPRHGSTLGGDAPCVAGFLRQFSFQPLREN 88
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LLGPS +TL +G LD +V ++Q +RL S +WLHAG+IHL+VNM SL+ + RLEQ+
Sbjct: 89 PLLGPSSATLEKMGALDWAKVVHQHQWWRLFSCVWLHAGLIHLIVNMMSLLFIGIRLEQQ 148
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSELI NWTIY+N
Sbjct: 149 FGFVRIGIIYLLSGFGGSVLSALFL--RNHYISVGASGALFGLLGSMLSELIMNWTIYSN 206
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +++ L +IA+NLA G +P DN AHIGGF SG L GF+L RPQ+G++ +
Sbjct: 207 KAAAITTLLFIIAINLAIGILP---HADNFAHIGGFVSGFLFGFVLLARPQFGWMERHEL 263
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLGYIT 277
+ PKY YQ W AL+ L++GY+
Sbjct: 264 ----PQTDQPPKYKMYQYALWGAALLFLLVGYVV 293
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 187/272 (68%), Gaps = 10/272 (3%)
Query: 4 KPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKEN 63
+PY +W W+ I + C+++F+ +M+VN+CP + +S C LGR++FQP KEN
Sbjct: 32 RPYY-RRWTPWIVAAIALSCVVVFLVSMYVNDCPRR--NSGDCAA-GFLGRFAFQPLKEN 87
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LLGPS +TL +G LD +V +Q +RL++ +WLHAG++HL++NM L+ + RLEQE
Sbjct: 88 PLLGPSSATLLKMGALDVTKVVHGHQGWRLITCIWLHAGVVHLLINMLCLLFIGIRLEQE 147
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YL+SG GGSL+S L + +SVGASGALFGL+G+MLSELI NW++YAN
Sbjct: 148 FGFVRIGLVYLISGLGGSLMSALFIRSS---ISVGASGALFGLIGSMLSELITNWSLYAN 204
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L L VI +NLA G +P VDN AHIGG SG LLGF++F+RPQ+ +++++ +
Sbjct: 205 KVAALLTLVFVIVVNLALGILP---RVDNFAHIGGLISGFLLGFVMFIRPQFAWINQRRV 261
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
A G + K+ YQ + W+ A I+L++G+
Sbjct: 262 APGQQPAPVKRKHKTYQYILWLAAAIMLIVGH 293
>gi|224134785|ref|XP_002321905.1| predicted protein [Populus trichocarpa]
gi|222868901|gb|EEF06032.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/265 (50%), Positives = 179/265 (67%), Gaps = 12/265 (4%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAK--TADSHQCVLRDILGRYSFQPWKENYLLGPSI 70
+WL P+ V + +F+ M +NNCP T +CV R LGR+SF+P K+N L GPS
Sbjct: 41 SWLVPMFVVANVAVFIVVMCINNCPKHLHTRLEGKCVAR-FLGRFSFEPLKDNPLFGPSS 99
Query: 71 STLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIA 130
+TL LG L+ +V K+Q +RL++ +WLHAGIIHL+ NM SL+ + RLEQ+FGF RI
Sbjct: 100 ATLERLGALEWTKVVDKHQGWRLITCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIG 159
Query: 131 PLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSV 190
+YLLSGFGGS+LS L + +SVGASGALFGLLG MLSELI NW+IY NK +L
Sbjct: 160 VVYLLSGFGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELITNWSIYTNKAAALLT 216
Query: 191 LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
L +I +NLA G +P VDN AHIGGF SG LLGF+L RPQYG++ + + +G K
Sbjct: 217 LLVIIVINLAIGILP---HVDNFAHIGGFLSGFLLGFVLLPRPQYGWLERRNVPSGVGVK 273
Query: 251 HRQPKYMHYQQLCWIIALILLVLGY 275
KY +Q W+I++ILL++G+
Sbjct: 274 ---SKYRAHQYALWLISVILLIVGF 295
>gi|224053955|ref|XP_002298056.1| predicted protein [Populus trichocarpa]
gi|222845314|gb|EEE82861.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/269 (50%), Positives = 187/269 (69%), Gaps = 9/269 (3%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
A +QW +WL P+ V I++F+ M+VN+CP K S + + LGR+SFQP KEN L
Sbjct: 27 AEKQWTSWLIPMFVVANIVVFIVVMYVNDCPKKNLGSERSCVAKFLGRFSFQPLKENPLF 86
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS +TL +G L+ N IVR +Q +RL++ MWLHAG+IH++ NM SL+ + RLEQ+FGF
Sbjct: 87 GPSSATLEKMGALEWNKIVRGDQGWRLITCMWLHAGVIHVLANMLSLVFIGIRLEQQFGF 146
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R+ +YL+SGFGGS+ S L + +SVGASGALFGLLG MLSEL+ NWTIY+NK
Sbjct: 147 VRVGLIYLVSGFGGSIFSSLF---IQRNISVGASGALFGLLGAMLSELLTNWTIYSNKIA 203
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L +IA+NLA G +P VDN AHIGGF +G LLGF+L LRPQ+G+V ++ A
Sbjct: 204 ALLTLMVIIAINLAVGILP---HVDNFAHIGGFFTGFLLGFVLLLRPQFGWVESQHFRA- 259
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLGY 275
DA H + K+ YQ + + A +LL++G+
Sbjct: 260 -DA-HVKSKHKAYQYMFLLAAAVLLIVGF 286
>gi|449440331|ref|XP_004137938.1| PREDICTED: uncharacterized protein LOC101206123 [Cucumis sativus]
Length = 397
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/252 (53%), Positives = 170/252 (67%), Gaps = 10/252 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P + I+ F TM VNNCP +S C+ R LGR+SFQ KEN LLGP
Sbjct: 60 RKWIPWLIPSFVIANIVTFFITMSVNNCPK---NSVSCIAR-FLGRFSFQSLKENPLLGP 115
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TLR +G L+ N +V NQ +RL++ +WLHAG+ HL+ NM SL+++ RLEQEFGF R
Sbjct: 116 SSLTLRRMGALEVNKVVHGNQLWRLITCIWLHAGVFHLLANMLSLLVIGIRLEQEFGFIR 175
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LY++SGFGGSLLS L + +SVGASGALFGLLG MLSELI NWTIY+NK +L
Sbjct: 176 IGLLYVISGFGGSLLSSLFIQSN---ISVGASGALFGLLGGMLSELITNWTIYSNKVAAL 232
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IA+NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G+VS++Y +
Sbjct: 233 VTLLVIIAINLAVGILP---HVDNFAHIGGFISGFLLGFVFLIRPQFGWVSQRYTSQTNS 289
Query: 249 AKHRQPKYMHYQ 260
+ K+ YQ
Sbjct: 290 SFGANHKFKIYQ 301
>gi|449483645|ref|XP_004156648.1| PREDICTED: uncharacterized protein LOC101224387 [Cucumis sativus]
Length = 471
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/252 (53%), Positives = 170/252 (67%), Gaps = 10/252 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P + I+ F TM VNNCP +S C+ R LGR+SFQ KEN LLGP
Sbjct: 134 RKWIPWLIPSFVIANIVTFFITMSVNNCPK---NSVSCIAR-FLGRFSFQSLKENPLLGP 189
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TLR +G L+ N +V NQ +RL++ +WLHAG+ HL+ NM SL+++ RLEQEFGF R
Sbjct: 190 SSLTLRRMGALEVNKVVHGNQLWRLITCIWLHAGVFHLLANMLSLLVIGIRLEQEFGFIR 249
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LY++SGFGGSLLS L + +SVGASGALFGLLG MLSELI NWTIY+NK +L
Sbjct: 250 IGLLYVISGFGGSLLSSLFIQSN---ISVGASGALFGLLGGMLSELITNWTIYSNKVAAL 306
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IA+NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G+VS++Y +
Sbjct: 307 VTLLVIIAINLAVGILP---HVDNFAHIGGFISGFLLGFVFLIRPQFGWVSQRYTSQTNS 363
Query: 249 AKHRQPKYMHYQ 260
+ K+ YQ
Sbjct: 364 SFGANHKFKIYQ 375
>gi|449455106|ref|XP_004145294.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449473549|ref|XP_004153913.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449508492|ref|XP_004163327.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 383
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/261 (51%), Positives = 177/261 (67%), Gaps = 12/261 (4%)
Query: 1 MENKPYAP-EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQP 59
+E Y P ++W WL PV V +MF +M+VN+CP +A C+ R LGR+SFQP
Sbjct: 38 IEFGQYRPFKKWVPWLVPVFVVANSVMFTISMYVNDCPKNSAS---CIGR-FLGRFSFQP 93
Query: 60 WKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYR 119
KEN LLGPS STL +G L+ + +V +Q +RL+S +WLHAG+ H++ NM SL+ + R
Sbjct: 94 LKENPLLGPSSSTLEKMGALEVDKVVYGHQAWRLISCLWLHAGVFHILANMLSLVFIGIR 153
Query: 120 LEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWT 179
LEQEFGF RI LY++SGFGGSL+S L + +SVGASGALFGLLG MLSEL+ NWT
Sbjct: 154 LEQEFGFVRIGMLYIVSGFGGSLMSALFIQSG---ISVGASGALFGLLGGMLSELLTNWT 210
Query: 180 IYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
IYANK +L L +I +NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G+VS
Sbjct: 211 IYANKLAALLTLLFIIVINLAVGVLP---HVDNFAHIGGFISGFLLGFVFLVRPQFGWVS 267
Query: 240 EKYIAAGYDAKHRQPKYMHYQ 260
++ G ++ + KY YQ
Sbjct: 268 QRNAPRG-NSSTSKSKYKPYQ 287
>gi|297837099|ref|XP_002886431.1| hypothetical protein ARALYDRAFT_893154 [Arabidopsis lyrata subsp.
lyrata]
gi|297332272|gb|EFH62690.1| hypothetical protein ARALYDRAFT_893154 [Arabidopsis lyrata subsp.
lyrata]
Length = 317
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 172/259 (66%), Gaps = 13/259 (5%)
Query: 3 NKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAK-TADSHQCVLRDILGRYSFQPWK 61
++ W +WL P I V + +F+ M VN+CP K T + +CV R LGR+SFQP K
Sbjct: 23 DESSGETHWTSWLIPAIVVANLAVFIAVMFVNDCPKKITGANKECVAR-FLGRFSFQPLK 81
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
EN L GPS STL +G L+ +V ++Q +RLLS MWLHAGIIHL+ NM SL+ + RLE
Sbjct: 82 ENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLE 141
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
Q+FGF R+ +YL+SG GGS+LS L +E +SVGASGALFGLLG MLSEL+ NWTIY
Sbjct: 142 QQFGFIRVGLIYLISGLGGSILSSLF---LQESISVGASGALFGLLGAMLSELLTNWTIY 198
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
ANK +L L +IA+NLA G +P VDN AHIGGF +G LGF+L +RPQYG+ + +
Sbjct: 199 ANKAAALITLLFIIAINLALGMLP---RVDNFAHIGGFLTGFCLGFVLLVRPQYGWEASR 255
Query: 242 YIAAGYDAKHRQPKYMHYQ 260
+ + KY YQ
Sbjct: 256 -----TNTSRTKRKYSMYQ 269
>gi|326519200|dbj|BAJ96599.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 188/275 (68%), Gaps = 10/275 (3%)
Query: 1 MENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPW 60
+ +PY +W WL P + C+ +F+ TM VN+CP +++ + LGR++FQP
Sbjct: 34 LRARPYY-RRWTPWLVPAASIACVAVFLVTMFVNDCPNRSSGNCSA---GFLGRFAFQPL 89
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
KEN LLGPS +TL +G LD + +V+ Q +RL++ +WLHAG++HL++N+ L+ + RL
Sbjct: 90 KENPLLGPSSTTLLKMGALDVSKVVQGRQGWRLITCIWLHAGVVHLLINVLCLLFIGIRL 149
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
EQEFGF RI +YL+SGFGGSL+S L + +SVGASGALFGL+G+MLSELI NW++
Sbjct: 150 EQEFGFVRIGLVYLISGFGGSLMSALFIRAS---ISVGASGALFGLIGSMLSELITNWSL 206
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
YANK +L L VI +NLA G +P VDN AHIGG SG LLGF++F+RPQ+ ++++
Sbjct: 207 YANKVAALLTLVLVIVVNLALGILP---RVDNFAHIGGLISGFLLGFVVFIRPQFAWINQ 263
Query: 241 KYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ + G + K+ YQ + WI+A ILL++G+
Sbjct: 264 RRVTPGPQTAPAERKHKTYQYILWIVAAILLIIGF 298
>gi|15221690|ref|NP_176500.1| rhomboid -like 2 [Arabidopsis thaliana]
gi|12323258|gb|AAG51610.1|AC010795_14 membrane protein, putative; 61952-60281 [Arabidopsis thaliana]
gi|28393358|gb|AAO42103.1| putative membrane protein [Arabidopsis thaliana]
gi|28827620|gb|AAO50654.1| putative membrane protein [Arabidopsis thaliana]
gi|77999980|dbj|BAE46871.1| Rhomboid family protein AtRBL2 [Arabidopsis thaliana]
gi|332195937|gb|AEE34058.1| rhomboid -like 2 [Arabidopsis thaliana]
Length = 317
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/252 (52%), Positives = 170/252 (67%), Gaps = 13/252 (5%)
Query: 10 QWRAWLTPVIFVVCIIMFVYTMHVNNCPAK-TADSHQCVLRDILGRYSFQPWKENYLLGP 68
W +WL P I V + +F+ M VN+CP K T + +CV R LGR+SFQP KEN L GP
Sbjct: 30 HWTSWLIPAIVVANLAVFIAVMFVNDCPKKITGPNKECVAR-FLGRFSFQPLKENPLFGP 88
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL +G L+ +V ++Q +RLLS MWLHAGIIHL+ NM SL+ + RLEQ+FGF R
Sbjct: 89 SSSTLEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIR 148
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+ +YL+SG GGS+LS L +E +SVGASGALFGLLG MLSEL+ NWTIYANK +L
Sbjct: 149 VGLIYLISGLGGSILSSLF---LQESISVGASGALFGLLGAMLSELLTNWTIYANKAAAL 205
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L +IA+NLA G +P VDN AHIGGF +G LGF+L +RPQYG+ + + +
Sbjct: 206 ITLLFIIAINLALGMLP---RVDNFAHIGGFLTGFCLGFVLLVRPQYGWEASR-----TN 257
Query: 249 AKHRQPKYMHYQ 260
+ KY YQ
Sbjct: 258 TSRTKRKYSMYQ 269
>gi|326528413|dbj|BAJ93395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 188/275 (68%), Gaps = 10/275 (3%)
Query: 1 MENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPW 60
+ +PY +W WL P + C+ +F+ TM VN+CP +++ + LGR++FQP
Sbjct: 34 LRARPYY-RRWTPWLVPAASIACVAVFLVTMFVNDCPNRSSGNCSA---GFLGRFAFQPL 89
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
KEN LLGPS +TL +G LD + +V+ Q +RL++ +WLHAG++HL++N+ L+ + RL
Sbjct: 90 KENPLLGPSSTTLLKMGALDVSKVVQGRQGWRLITCIWLHAGVVHLLINVLCLLFIGIRL 149
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
EQEFGF RI +YL+SGFGGSL+S L + +SVGASGALFGL+G+MLSELI NW++
Sbjct: 150 EQEFGFVRIGLVYLISGFGGSLMSALFIRAS---ISVGASGALFGLIGSMLSELITNWSL 206
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
YANK +L L VI +NLA G +P VDN AHIGG SG LLGF++F+RPQ+ ++++
Sbjct: 207 YANKVAALLTLVLVIVVNLALGILP---RVDNFAHIGGLISGFLLGFVVFIRPQFAWINQ 263
Query: 241 KYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ + G + K+ YQ + WI+A ILL++G+
Sbjct: 264 RRVTPGPQTAPAERKHKTYQYILWIVAAILLIIGF 298
>gi|297746062|emb|CBI16118.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 133/245 (54%), Positives = 175/245 (71%), Gaps = 10/245 (4%)
Query: 31 MHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
M +NNCP +S CV D LGR+SFQP KEN LLGPS STL +G L+ + +V ++Q
Sbjct: 1 MFINNCPK---NSVSCV-ADFLGRFSFQPLKENPLLGPSSSTLEKMGALEVSKVVHRHQV 56
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+RL+S +WLHAG+ H++ NM SL+ + RLEQEFGF RI LY++SGFGGS+LS L +
Sbjct: 57 WRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYVVSGFGGSMLSSLFIQS 116
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
+SVGASGALFGLLG MLSELI NWTIYANK +L L +I +NLA G +P V
Sbjct: 117 S---ISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIVNLAVGILP---HV 170
Query: 211 DNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALIL 270
DN AHIGGF SG LLGF+ +RPQ+G+VS++ + G+ A +PK+ YQ + W+++LIL
Sbjct: 171 DNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKHKMYQYVLWVMSLIL 230
Query: 271 LVLGY 275
L +G+
Sbjct: 231 LTVGF 235
>gi|356557429|ref|XP_003547018.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 389
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 136/266 (51%), Positives = 178/266 (66%), Gaps = 10/266 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
++W WL P V I++F+ TM++N+CP K + CV LGR+SFQP KEN L GP
Sbjct: 47 KRWFPWLVPTFVVANIVVFIVTMYINDCP-KHSFYGSCV-ASFLGRFSFQPLKENPLFGP 104
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL +G L+ ++ ++Q +RL S +WLH G++HL+ NM SL+ + RLEQEFGF R
Sbjct: 105 SSSTLEKMGALEVGKVIHRHQVWRLFSCIWLHGGVVHLLANMLSLVFIGIRLEQEFGFVR 164
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LY++SGFGGSLLS L +E +SVGASGALFGLLG MLSEL+ NWTIYANK +L
Sbjct: 165 IGFLYVISGFGGSLLSALF---IQEGISVGASGALFGLLGGMLSELLINWTIYANKFAAL 221
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L ++ +NLA G +P VDN AHIGGF SG LLGFI +RPQ+ +VS ++ +
Sbjct: 222 LTLIVIVVINLAVGILP---HVDNFAHIGGFVSGFLLGFIFLIRPQFKWVSSRHRNSHSS 278
Query: 249 AKHRQPKYMH--YQQLCWIIALILLV 272
A KY H YQ W+I+ ILL+
Sbjct: 279 AAAPSVKYKHKPYQYALWVISFILLI 304
>gi|356547255|ref|XP_003542031.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 392
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 134/266 (50%), Positives = 176/266 (66%), Gaps = 10/266 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
++W WL P V I++F+ TM++N+CP + CV LGR+SFQP KEN LLGP
Sbjct: 50 KRWFPWLVPTFVVANIVVFIVTMYINDCPNHSFYG-SCV-ASFLGRFSFQPLKENPLLGP 107
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL +G L+ ++ +Q +RL S +WLH G++H++ NM SL+ + RLEQEFGF R
Sbjct: 108 SSSTLEKMGALEVGKVIHGHQVWRLFSCIWLHGGVVHVLANMLSLVFIGIRLEQEFGFVR 167
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LY++SGFGGSLLS L +E +SVGASGALFGLLG MLSEL+ NWTIYANK +L
Sbjct: 168 IGFLYVISGFGGSLLSALF---IQEGISVGASGALFGLLGGMLSELLINWTIYANKFAAL 224
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L ++ +NLA G +P VDN AHIGGF SG LGFI +RPQ+ +VS ++ +
Sbjct: 225 LTLIVIVVINLAIGVLP---HVDNFAHIGGFVSGFFLGFIFLIRPQFKWVSSRHRNSHST 281
Query: 249 AKHRQPKYMH--YQQLCWIIALILLV 272
A KY H YQ W+I+ ILL+
Sbjct: 282 AAAPSVKYKHKPYQYALWVISFILLI 307
>gi|115450317|ref|NP_001048759.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|108705857|gb|ABF93652.1| membrane protein, putative, expressed [Oryza sativa Japonica Group]
gi|113547230|dbj|BAF10673.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|125542142|gb|EAY88281.1| hypothetical protein OsI_09736 [Oryza sativa Indica Group]
gi|125584694|gb|EAZ25358.1| hypothetical protein OsJ_09173 [Oryza sativa Japonica Group]
gi|215692511|dbj|BAG87931.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 325
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 181/268 (67%), Gaps = 10/268 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTAD-SHQCVLRDILGRYSFQPWKENYLLG 67
+W W+ P V I++FV TM+ NNCP T S +C+ R LGR+SFQP EN LLG
Sbjct: 32 REWVPWIVPSFLVANIVVFVLTMYANNCPLHTPPRSGKCIAR-FLGRFSFQPLHENPLLG 90
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
PS +TL+ +G L + +V ++Q YRL++S+WLHAG++HLV NM SL+ + RLEQ+FG+
Sbjct: 91 PSSATLQKMGALVWDKVVHEHQGYRLITSIWLHAGVLHLVANMLSLIFIGLRLEQQFGYV 150
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
RI +YLLSG GGS+LS L + +SVGASGALFGLLG MLSEL+ NWTIY NK +
Sbjct: 151 RIGAIYLLSGLGGSVLSSLFIRNH---ISVGASGALFGLLGAMLSELLTNWTIYTNKVAA 207
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGY 247
+ L VIA+NLA G +P V+N AHIGGF +G LLGF+L +RP +G++ + +G
Sbjct: 208 VITLLFVIAVNLALGILP---HVNNFAHIGGFLTGFLLGFVLLMRPHFGWMERYSLPSGS 264
Query: 248 DAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ KY+ YQ + IA L+++G+
Sbjct: 265 PCSSK--KYLVYQWILLAIATALVIVGF 290
>gi|357114368|ref|XP_003558972.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 331
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 179/276 (64%), Gaps = 18/276 (6%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADS---------HQCVLRDILGRYSFQP 59
+W WL P I V I++F TM+ NNCPA A++ QCV LGR+SFQP
Sbjct: 30 REWTPWLVPSILVANIVVFAITMYYNNCPAHNANTGTRGGSKQQQQCV-AGFLGRFSFQP 88
Query: 60 WKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYR 119
++N LLGPS +TL +G L + +V +Q +RLLS MWLHAGI+HL+ NM SL+ + R
Sbjct: 89 LRQNPLLGPSSATLEKMGALVWDKVVHSHQGWRLLSCMWLHAGILHLLANMLSLLFIGLR 148
Query: 120 LEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWT 179
LEQ+FG+ RI +YLLSG GGS+LS L + +SVGASGALFGLLG MLSEL+ NWT
Sbjct: 149 LEQQFGYVRIGAIYLLSGIGGSVLSSLF---IRTSISVGASGALFGLLGAMLSELLTNWT 205
Query: 180 IYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
IY NK ++ L VI +NL G +P V+N AHIGGF +G LLGF++ +RP YG++
Sbjct: 206 IYTNKVAAVMTLLFVITVNLVLGILP---HVNNFAHIGGFLAGFLLGFVVLMRPHYGWME 262
Query: 240 EKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+ AG R KY+ YQ + +AL+L V+G+
Sbjct: 263 RYSLPAGTPCTSR--KYLLYQWVLMAVALLLGVIGF 296
>gi|224090695|ref|XP_002309063.1| predicted protein [Populus trichocarpa]
gi|222855039|gb|EEE92586.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 174/259 (67%), Gaps = 12/259 (4%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWK 61
+ +P+ ++W WL P + ++MF+ TM+VNNCP C+ R LGR+SFQP+K
Sbjct: 25 KARPF--KKWWPWLIPAFVIANVVMFIITMYVNNCPKNYVS---CIAR-FLGRFSFQPFK 78
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
EN LLGPS +L+ +G LD +V +Q +RL++ WLH G+ HL+ NM SL+++ RLE
Sbjct: 79 ENPLLGPSSISLQKMGALDVQKVVDGHQWWRLITCNWLHGGVFHLLANMLSLLVIGIRLE 138
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
QEFGF ++ LY++SGFGGSLLS L + +SVGASGALFGLLG+MLSELI NWTIY
Sbjct: 139 QEFGFVKVGLLYVISGFGGSLLSALFIQSN---ISVGASGALFGLLGSMLSELITNWTIY 195
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
AN+ + L +IA+NLA G +P VDN AHIGGF SG LLGF+ +RPQ+G+ S++
Sbjct: 196 ANQVAAFITLVVIIAVNLALGILP---HVDNFAHIGGFLSGFLLGFVFLIRPQFGWFSQR 252
Query: 242 YIAAGYDAKHRQPKYMHYQ 260
GY + K+ YQ
Sbjct: 253 RAPLGYIPASVKSKFKTYQ 271
>gi|148906261|gb|ABR16286.1| unknown [Picea sitchensis]
Length = 383
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/255 (52%), Positives = 176/255 (69%), Gaps = 11/255 (4%)
Query: 8 PEQWRAWLTPVIFVVC-IIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
P + R+ +FVV I++F+ M +N+CP DS C L+ LGR+SFQP KEN L
Sbjct: 42 PNRRRSSCIISLFVVLNIVIFLVAMFINDCPKDLGDS--CTLK-FLGRFSFQPLKENPLF 98
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS STL +G L+ +V+++Q +RL++ +WLHAG+IHL+ NM SL+ + RLEQEFGF
Sbjct: 99 GPSSSTLEKMGALEWQKVVKEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQEFGF 158
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
ARI +YL+S FGGS+LS L ++ VSVGASGALFGLLG MLSELI NWTIYA+K
Sbjct: 159 ARIGTVYLVSAFGGSVLSALFNQNG---VSVGASGALFGLLGAMLSELITNWTIYASKFA 215
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L +I +NLAFG +P VDN AHIGGF SG LLGF+ +RPQ+G+V+ K I G
Sbjct: 216 ALVTLVFIIVVNLAFGLLP---HVDNFAHIGGFISGFLLGFVFLMRPQFGWVNRKIIPPG 272
Query: 247 YDAKH-RQPKYMHYQ 260
YD + K+ YQ
Sbjct: 273 YDVNSVVKSKHNAYQ 287
>gi|242056443|ref|XP_002457367.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
gi|241929342|gb|EES02487.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
Length = 338
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/278 (45%), Positives = 186/278 (66%), Gaps = 20/278 (7%)
Query: 11 WRAWLTPVIFVVCIIMFVYTMHVNNCPA--------------KTADSHQCVLRDILGRYS 56
W +L P+ + +++FV TM+VN+CPA ++A + C+L LGR++
Sbjct: 67 WFPFLVPLFILANVVLFVLTMYVNDCPAHARATGAAIGGSVGESATAQGCLLAPELGRFA 126
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
FQ +KEN L+GP+ +TL ++G L+ + + + ++ +RL++ +WLHAG+IH++ NM SL+++
Sbjct: 127 FQSFKENPLIGPTSATLLEMGALETSKVTKDHEGWRLITCIWLHAGVIHILANMLSLLMI 186
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
RLE+EFGF RI LY++SG GGSLLS L +SVGASGALFGLLG+MLSELI
Sbjct: 187 GIRLEKEFGFIRIGTLYVISGVGGSLLSSLFMVSN---ISVGASGALFGLLGSMLSELIT 243
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
NWTIY NK +L L +I +NLA G +P VDN AH+GGF SG LGF+L +RPQ+G
Sbjct: 244 NWTIYENKFAALLTLVMIIVINLAVGILP---HVDNFAHLGGFMSGFCLGFVLLIRPQFG 300
Query: 237 YVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
Y+++K G+ A + K+ YQ + +IA +++V G
Sbjct: 301 YINQKNSPLGFPAGVTKQKFKIYQIVLLVIATMMIVSG 338
>gi|3461845|gb|AAC33231.1| hypothetical protein [Arabidopsis thaliana]
Length = 372
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 190/330 (57%), Gaps = 66/330 (20%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWK 61
E +P+ + W WL P I V I +F +M +NNCP +A C+ R LGR++FQP K
Sbjct: 47 EFRPF--KLWFPWLVPAIVVANIALFAISMFINNCPKNSA---YCLAR-FLGRFAFQPMK 100
Query: 62 ENYLLGPS--------ISTL------------------RDLGGLDRNLIVRKNQKYRLLS 95
EN LLGPS ISTL +G LD +++V K++ +RL +
Sbjct: 101 ENPLLGPSSLTWVTLKISTLFLKIPHLIEIRVSEFEILEKMGALDVSMVVHKHEVWRLFT 160
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
+WLHAG+ H++ NM SL+ + RLEQEFGF RI LY++SGFGGSLLS L ++ +
Sbjct: 161 CIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLSSLFNRAG---I 217
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS---------------------- 193
SVGASGALFGLLG MLSEL+ NWTIYANK S++
Sbjct: 218 SVGASGALFGLLGAMLSELLTNWTIYANKVAKSSLVKQAALSMNDVSIMSLVFLHLQFAA 277
Query: 194 ------VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGY 247
+IA+NLA G +P VDN AH+GGF SG LLGF+ +RPQYGY +++ GY
Sbjct: 278 LLTLIFIIAINLAVGILP---HVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGY 334
Query: 248 DAKHRQPKYMHYQQLCWIIALILLVLGYIT 277
A + K+ YQ + WI +L+LL+ GY +
Sbjct: 335 AAPSAKSKHKPYQYVLWITSLVLLIAGYTS 364
>gi|357159526|ref|XP_003578474.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 330
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/270 (51%), Positives = 187/270 (69%), Gaps = 11/270 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAK-TADSHQCVLRDILGRYSFQPWKENYLLG 67
+W WL P + V CI +FV M VN+CP +A CV+ L R+SFQP +EN LLG
Sbjct: 38 RKWWPWLVPTVIVACIAVFVVEMWVNDCPRHGSALGGGCVV-GFLRRFSFQPLRENPLLG 96
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
PS +TL +G LD N +V ++Q +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+FGF
Sbjct: 97 PSSATLGKMGALDWNKVVHEHQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFV 156
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
RI +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSELI NWTIY+NK +
Sbjct: 157 RIGAIYLLSGFGGSVLSALFL--RSNYISVGASGALFGLLGSMLSELIMNWTIYSNKVAA 214
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGY 247
+ L +IA+N+A G +P DN AHIGGF +G LLGF+L RPQ+G++ +
Sbjct: 215 IITLLFIIAINMAIGILP---HADNFAHIGGFVTGFLLGFVLLARPQFGWMERNEL---- 267
Query: 248 DAKHRQPKYMHYQQLCWIIALILLVLGYIT 277
++ PKY YQ + W++AL+LL++G++T
Sbjct: 268 PHTNQPPKYKAYQYVLWVVALLLLLVGFVT 297
>gi|297740363|emb|CBI30545.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/243 (53%), Positives = 174/243 (71%), Gaps = 11/243 (4%)
Query: 26 MFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIV 85
MF TM+VNNCP +S C+ D LGR+SFQP+KEN LLGPS STL+ +G LD + +V
Sbjct: 1 MFGITMYVNNCPK---NSISCI-ADFLGRFSFQPFKENPLLGPSSSTLQKMGALDVSRVV 56
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
++Q +RL++ +WLH G+ HL+ NM SL+++ RLEQEFGF ++ LY++SGFGGSLLS
Sbjct: 57 DRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGSLLSG 116
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
L +E +SVGASGALFGLLG MLSELI NW+IYANK + L +IA+NLA G +P
Sbjct: 117 LF---IQENISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLAVGILP 173
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWI 265
VDN AHIGGF SG LLGF+ +RPQ+G+VS+ Y A+ + +PK+ YQ + W+
Sbjct: 174 ---HVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQIY-ASPEHSTSPKPKFKTYQCILWV 229
Query: 266 IAL 268
++
Sbjct: 230 ASV 232
>gi|297820116|ref|XP_002877941.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323779|gb|EFH54200.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 133/270 (49%), Positives = 186/270 (68%), Gaps = 17/270 (6%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
W +WL P V +++FV TM+VNNCP K+ D D LGR+SFQ +EN LLGP
Sbjct: 61 RSWFSWLIPCFVVANVVVFVITMYVNNCPKKSGD----CFADFLGRFSFQNTRENPLLGP 116
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TL+ +GGLD +V+ ++ +RLLS WLH G++HL+VNM +L+ + R+E+EFGF R
Sbjct: 117 SSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLVNMLTLLFIGIRMEREFGFIR 176
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LYL+SGFGGS+LS L + +SVGASGA+FGLLG MLSE+ NWTIY+NK ++
Sbjct: 177 IGLLYLISGFGGSILSALFLRSN---ISVGASGAVFGLLGGMLSEIFINWTIYSNKIVTI 233
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L ++A+NL G +P GVDN AHIGGF++G LLGF+L +RP YG+++++ +
Sbjct: 234 ITLVIIVAVNLGLGVLP---GVDNFAHIGGFSTGFLLGFVLLIRPHYGWINQR------N 284
Query: 249 AKHRQP-KYMHYQQLCWIIALILLVLGYIT 277
A +P ++ YQ + W I+L+LLV G+IT
Sbjct: 285 APGAKPHRFKMYQGILWTISLLLLVAGFIT 314
>gi|30693911|ref|NP_850698.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
gi|332645622|gb|AEE79143.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
Length = 394
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 134/269 (49%), Positives = 183/269 (68%), Gaps = 17/269 (6%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
W WL P V + +FV TM+VNNCP K+ D D LGR+SFQ +EN LLGP
Sbjct: 62 RSWFPWLIPCFVVANVAVFVITMYVNNCPKKSGD----CFADFLGRFSFQNTRENPLLGP 117
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TL+ +GGLD +V+ ++ +RLLS WLH G++HL++NM +L+ + R+E+EFGF R
Sbjct: 118 SSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIR 177
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LYL+SGFGGS+LS L + +SVGASGA+FGLLG MLSE+ NWTIY+NK ++
Sbjct: 178 IGLLYLISGFGGSILSALFLRSN---ISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTI 234
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L ++A+NL G +P GVDN AHIGGFA+G LLGF+L +RP YG+++++ G
Sbjct: 235 VTLVLIVAVNLGLGVLP---GVDNFAHIGGFATGFLLGFVLLIRPHYGWINQR---NGPG 288
Query: 249 AK-HRQPKYMHYQQLCWIIALILLVLGYI 276
AK HR + YQ + W I+L++LV G+I
Sbjct: 289 AKPHR---FKIYQGILWTISLLILVAGFI 314
>gi|414876345|tpg|DAA53476.1| TPA: hypothetical protein ZEAMMB73_598699 [Zea mays]
Length = 663
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 185/279 (66%), Gaps = 20/279 (7%)
Query: 11 WRAWLTPVIFVVCIIMFVYTMHVNNCPA--------------KTADSHQCVLRDILGRYS 56
W +L P+ V I++FV TM+VN+CPA ++A + C L LGR++
Sbjct: 60 WFPFLVPLFIVANIVLFVLTMYVNDCPAHARATGAAIGGSVGESATAQGCWLAPELGRFA 119
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
FQ +KEN L+GPS +TL ++G L+ + + + ++ +RL++ +WLHAG++H++ NM SL+++
Sbjct: 120 FQSFKENPLIGPSSATLLEMGALETSKVTKDHEGWRLITCIWLHAGVVHILANMLSLLMI 179
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
RLE+EFGF RI LY++SG GGSLLS L +SVGASGALFGLLG+MLSELI
Sbjct: 180 GIRLEKEFGFIRIGTLYVISGVGGSLLSSLFMVSN---ISVGASGALFGLLGSMLSELIT 236
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
NWTIY NK +L L +I +NLA G +P VDN AH+GGF SG LGF+L +RPQ+G
Sbjct: 237 NWTIYENKFAALLTLVMIILINLAVGILP---HVDNFAHLGGFMSGFCLGFVLLMRPQFG 293
Query: 237 YVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
Y+++K G+ + K+ YQ + +I+ ++LV G+
Sbjct: 294 YINQKNSPLGFPMGVTKRKFKTYQVILLVISTMILVSGF 332
>gi|226494277|ref|NP_001151264.1| membrane protein [Zea mays]
gi|195645390|gb|ACG42163.1| membrane protein [Zea mays]
Length = 414
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 185/279 (66%), Gaps = 20/279 (7%)
Query: 11 WRAWLTPVIFVVCIIMFVYTMHVNNCPA--------------KTADSHQCVLRDILGRYS 56
W +L P+ V I++FV TM+VN+CPA ++A + C L LGR++
Sbjct: 60 WFPFLVPLFIVANIVLFVLTMYVNDCPAHARATGAAIGGSVGESATAQGCWLAPELGRFA 119
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
FQ +KEN L+GPS +TL ++G L+ + + + ++ +RL++ +WLHAG++H++ NM SL+++
Sbjct: 120 FQSFKENPLIGPSSATLLEMGALETSKVTKDHEGWRLITCIWLHAGVVHILANMLSLLMI 179
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
RLE+EFGF RI LY++SG GGSLLS L +SVGASGALFGLLG+MLSELI
Sbjct: 180 GIRLEKEFGFIRIGTLYVISGVGGSLLSSLFMVSN---ISVGASGALFGLLGSMLSELIT 236
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
NWTIY NK +L L +I +NLA G +P VDN AH+GGF SG LGF+L +RPQ+G
Sbjct: 237 NWTIYENKFAALLTLVMIILINLAVGILP---HVDNFAHLGGFMSGFCLGFVLLMRPQFG 293
Query: 237 YVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
Y+++K G+ + K+ YQ + +I+ ++LV G+
Sbjct: 294 YINQKNSPLGFPMGVTKRKFKTYQVILLVISTMILVSGF 332
>gi|357165337|ref|XP_003580349.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 343
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/267 (48%), Positives = 179/267 (67%), Gaps = 14/267 (5%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+Q R WL P++ + + MF+ M+ N+CP + + CV R +L R+SFQP KEN L GP
Sbjct: 56 KQHRTWLVPLVVLANVAMFIVVMYYNDCP--RSGNGDCVGRGVLRRFSFQPLKENPLFGP 113
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL GGLDR +VR N+ +RL +S WLHAG+IHL NM SL+ V RLEQ+FGF +
Sbjct: 114 SATTLGKYGGLDRYKVVRGNEAWRLETSTWLHAGLIHLGANMISLIFVGVRLEQQFGFWK 173
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+ +YL+SG GGS+LS L + VSVGASGALFGLLG MLSELI NW+IY N+ ++
Sbjct: 174 VGLVYLVSGLGGSILSVLFIRNG---VSVGASGALFGLLGAMLSELITNWSIYTNRIAAM 230
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
+ L + A+NLA G +P VDN AHIGGFA+G LLGF+L ++P++G++ + + A
Sbjct: 231 ANLIIIAAINLALGILP---HVDNFAHIGGFATGFLLGFVLLIQPRFGWLEQPFGA---- 283
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGY 275
+ KY Q + ++ALIL + G+
Sbjct: 284 --KSKSKYTACQIILLVVALILSIAGF 308
>gi|449446051|ref|XP_004140785.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449485528|ref|XP_004157199.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 323
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/270 (46%), Positives = 177/270 (65%), Gaps = 16/270 (5%)
Query: 10 QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTAD-SHQCVLRDILGRYSFQPWKENYLLGP 68
QW +WL P+ V I +F+ M++NNCP + +CV R L R+SFQP +EN L GP
Sbjct: 32 QWTSWLVPMFVVANIAVFIVVMYINNCPKHNDEFEGKCVAR-FLERFSFQPLRENPLFGP 90
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL +G L+ +V K+Q +RL++ +WLHAG+ HL+ NM L+ + RLEQ+FGF R
Sbjct: 91 SATTLEKMGALESTKVVNKHQAWRLITCIWLHAGVFHLLANMLCLVFIGTRLEQQFGFVR 150
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +YL+SGFGGS+LS L + +SVGASG+LFGLLG MLSEL NWTIY NK +L
Sbjct: 151 IGVIYLVSGFGGSVLSSLLIQNN---ISVGASGSLFGLLGAMLSELFTNWTIYTNKAAAL 207
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY---IAA 245
+ L +I +N G +P V+N AHIGGF +G LLGF L RP+YG++ ++ + A
Sbjct: 208 ATLLVIIFINFGIGLLP---HVNNFAHIGGFLTGFLLGFALLPRPKYGWLEQRNLPGVGA 264
Query: 246 GYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
G + KY YQ + WI++++LL+ G+
Sbjct: 265 GLSS-----KYKTYQYVLWIVSVVLLIAGF 289
>gi|116310009|emb|CAH67035.1| OSIGBa0139P06.8 [Oryza sativa Indica Group]
gi|218195395|gb|EEC77822.1| hypothetical protein OsI_17028 [Oryza sativa Indica Group]
Length = 342
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 177/264 (67%), Gaps = 14/264 (5%)
Query: 12 RAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIS 71
R W+ P++ + + MFV M+ NNCPA CV R L R SFQP +EN +LGPS +
Sbjct: 58 RTWVVPLVVIANVAMFVVVMYYNNCPAN-GGRRDCVGRSFLRRLSFQPLRENPVLGPSAA 116
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
TLR G LD +V NQ +RL +S WLHAG+IHL NM SL+L+ RLEQ+FGF ++
Sbjct: 117 TLRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLLIGIRLEQQFGFWKVGL 176
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
+YL+SGFGGS+LS L + ++VGASGALFGLLG MLSELI NWTIY+N+C ++ L
Sbjct: 177 VYLVSGFGGSVLSVLFI--SRNGITVGASGALFGLLGAMLSELITNWTIYSNRCAAMVNL 234
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKH 251
+ A+NLA G +P VDN AHIGGFA+G LLGF+L ++PQ+G+ SE+ +A
Sbjct: 235 IIIAAINLALGILP---RVDNFAHIGGFATGFLLGFVLLIQPQFGW-SEQVSSA------ 284
Query: 252 RQPKYMHYQQLCWIIALILLVLGY 275
+ KY +Q + +++ LL+ G+
Sbjct: 285 -KSKYNAFQIILLTLSVALLIAGF 307
>gi|357134029|ref|XP_003568622.1| PREDICTED: uncharacterized protein LOC100834911 [Brachypodium
distachyon]
Length = 417
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 187/288 (64%), Gaps = 22/288 (7%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQ--------------CV 47
E +P+ +W +L P+ V I +FV TM+ N+CPA A + C+
Sbjct: 56 EFRPF--RRWFPFLVPLFIVANIALFVLTMYENDCPAHAAAAGAAIGGSVGGAGAAQGCL 113
Query: 48 LRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLV 107
L LGR++FQ ++EN L+GPS +TL +G L+ + + + ++ +RL++ +WLHAG+IH++
Sbjct: 114 LEPELGRFAFQSYRENPLVGPSSATLLKMGALETSKVAKDHEGWRLITCIWLHAGVIHIL 173
Query: 108 VNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLL 167
NM SL+++ RLE+EFGF RI LY++SG GGSLLS L +SVGASGALFGLL
Sbjct: 174 ANMLSLLMIGIRLEKEFGFLRIGTLYVISGVGGSLLSALFMVSN---ISVGASGALFGLL 230
Query: 168 GTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
G+MLSELI NWTIY NK +L L +IA+NLA G +P VDN AHIGGF SG LGF
Sbjct: 231 GSMLSELITNWTIYENKFAALLTLVMIIAINLAVGILP---HVDNFAHIGGFISGFFLGF 287
Query: 228 ILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+L +RPQ+GY+++K G + KY YQ + +IAL++L+ G+
Sbjct: 288 VLLIRPQFGYINQKNSPLGLSTGPTKCKYKTYQIILLVIALMILISGF 335
>gi|242079729|ref|XP_002444633.1| hypothetical protein SORBIDRAFT_07g025140 [Sorghum bicolor]
gi|241940983|gb|EES14128.1| hypothetical protein SORBIDRAFT_07g025140 [Sorghum bicolor]
Length = 332
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/257 (49%), Positives = 167/257 (64%), Gaps = 14/257 (5%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCP-----AKTADSHQCVLRDILGRYSFQPWKEN 63
+W WL P + V CI +F M VN+CP CV +L R+SFQP +EN
Sbjct: 35 RRWWPWLVPTVLVACIAVFAAEMFVNDCPRHGSALGGGAGSGCVAAGLLRRFSFQPLREN 94
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
L GPS +TL +G L+ +V ++Q +RL+S +WLHAG++HLVVNM SL+ + RLEQ+
Sbjct: 95 PLFGPSSATLEKMGALNWAKVVHEHQGWRLISCIWLHAGLVHLVVNMLSLLFIGIRLEQQ 154
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YL+SGFGGS+LS L +SVGASGALFGLLG+MLSELI NWTIY+N
Sbjct: 155 FGFVRIGVIYLISGFGGSVLSALFL--HSNYISVGASGALFGLLGSMLSELIMNWTIYSN 212
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K ++ L +IA+NLA G +P DN AHIGGFASG LLGF+L RPQ+G++ +
Sbjct: 213 KAAAIITLLFIIAINLAIGILP---HADNFAHIGGFASGFLLGFVLLARPQFGWMERSEL 269
Query: 244 AAGYDAKHRQPKYMHYQ 260
++ PKY YQ
Sbjct: 270 ----PQTNQPPKYKLYQ 282
>gi|15222058|ref|NP_172735.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|145323878|ref|NP_001077528.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|334182523|ref|NP_001184975.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|17529034|gb|AAL38727.1| putative membrane protein [Arabidopsis thaliana]
gi|20259083|gb|AAM14257.1| putative membrane protein [Arabidopsis thaliana]
gi|332190800|gb|AEE28921.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|332190801|gb|AEE28922.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|332190802|gb|AEE28923.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
Length = 307
Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/271 (48%), Positives = 179/271 (66%), Gaps = 8/271 (2%)
Query: 4 KPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKEN 63
K QW AWLTP I V + +F+ M+ N+CP T ++ + +L R+SFQP +EN
Sbjct: 11 KHRGDTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLREN 70
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LGPS STL LG LD +V+ N+K+RL+++MWLHAGIIHLV+NM +++ RLEQ+
Sbjct: 71 PFLGPSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQ 130
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YL+SGFGGS+LS L ++ +SVGASGAL GL+G MLSEL+ NWTIY +
Sbjct: 131 FGFIRIGLIYLISGFGGSILSALF---LQKSISVGASGALLGLMGAMLSELLTNWTIYKS 187
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L +IA+NLA G +P VDN AHIGG +G LGFIL ++PQ G+ E
Sbjct: 188 KLCALLSFLFIIAINLAIGLLP---WVDNFAHIGGLLTGFCLGFILLMQPQSGW-EEFRN 243
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
++ Y A+ R KY Q + + +A +L+V G
Sbjct: 244 SSQYGARARS-KYNPCQYVLFFVAAVLVVAG 273
>gi|242042499|ref|XP_002468644.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
gi|241922498|gb|EER95642.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
Length = 326
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 129/254 (50%), Positives = 168/254 (66%), Gaps = 11/254 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSH--QCVLRDILGRYSFQPWKENYLL 66
+W W+ PV FV I +FV TM+VNNCP T +CV R LGR+SFQP ++N LL
Sbjct: 32 REWVPWIVPVFFVANITVFVITMYVNNCPTHTTTPRDAKCVAR-FLGRFSFQPLRQNPLL 90
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS +TL +G L +V +Q +RLLSSMWLHAG++HLV NM L+ V RLEQ+FG+
Sbjct: 91 GPSSATLTKMGALVWEKVVHHHQGWRLLSSMWLHAGVLHLVANMLCLLFVGMRLEQQFGY 150
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
RI +Y+LSG GG++LS L + +SVGASGALFGLLG MLSELI NWTIY NK
Sbjct: 151 VRIGAIYILSGLGGAVLSSLFIRNH---ISVGASGALFGLLGAMLSELITNWTIYTNKAV 207
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+++ L V A+NL G +P V+N AHIGGF +G LLG ++ +RP +G++ + AG
Sbjct: 208 AVATLLFVAAVNLVLGILP---HVNNFAHIGGFLAGFLLGLVVLMRPHFGWMERYSMPAG 264
Query: 247 YDAKHRQPKYMHYQ 260
R KY+ YQ
Sbjct: 265 APCTAR--KYLAYQ 276
>gi|115459992|ref|NP_001053596.1| Os04g0569300 [Oryza sativa Japonica Group]
gi|38344377|emb|CAE02252.2| OSJNBb0032E06.11 [Oryza sativa Japonica Group]
gi|113565167|dbj|BAF15510.1| Os04g0569300 [Oryza sativa Japonica Group]
gi|215704480|dbj|BAG93914.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 177/264 (67%), Gaps = 14/264 (5%)
Query: 12 RAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIS 71
R W+ P++ + + MFV M+ NNCPA CV R L R SFQP +EN +LGPS +
Sbjct: 58 RTWVVPLVVIANVAMFVVVMYYNNCPAN-GGRRDCVGRSFLRRLSFQPLRENPVLGPSAA 116
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
TLR G LD +V NQ +RL +S WLHAG+IHL NM SL+++ RLEQ+FGF ++
Sbjct: 117 TLRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKVGL 176
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
+YL+SGFGGS+LS L + ++VGASGALFGLLG MLSELI NWTIY+N+C ++ L
Sbjct: 177 VYLVSGFGGSVLSVLFI--SRNGITVGASGALFGLLGAMLSELITNWTIYSNRCAAMVNL 234
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKH 251
+ A+NLA G +P VDN AHIGGFA+G LLGF+L ++PQ+G+ SE+ +A
Sbjct: 235 IIIAAINLALGILP---RVDNFAHIGGFATGFLLGFVLLIQPQFGW-SEQVSSA------ 284
Query: 252 RQPKYMHYQQLCWIIALILLVLGY 275
+ KY +Q + +++ LL+ G+
Sbjct: 285 -KSKYNAFQIILLTLSVALLIAGF 307
>gi|9502383|gb|AAF88090.1|AC025417_18 T12C24.28 [Arabidopsis thaliana]
Length = 302
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 131/271 (48%), Positives = 179/271 (66%), Gaps = 8/271 (2%)
Query: 4 KPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKEN 63
K QW AWLTP I V + +F+ M+ N+CP T ++ + +L R+SFQP +EN
Sbjct: 6 KHRGDTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLREN 65
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LGPS STL LG LD +V+ N+K+RL+++MWLHAGIIHLV+NM +++ RLEQ+
Sbjct: 66 PFLGPSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQ 125
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YL+SGFGGS+LS L ++ +SVGASGAL GL+G MLSEL+ NWTIY +
Sbjct: 126 FGFIRIGLIYLISGFGGSILSALF---LQKSISVGASGALLGLMGAMLSELLTNWTIYKS 182
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L +IA+NLA G +P VDN AHIGG +G LGFIL ++PQ G+ E
Sbjct: 183 KLCALLSFLFIIAINLAIGLLP---WVDNFAHIGGLLTGFCLGFILLMQPQSGW-EEFRN 238
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
++ Y A+ R KY Q + + +A +L+V G
Sbjct: 239 SSQYGARARS-KYNPCQYVLFFVAAVLVVAG 268
>gi|297849660|ref|XP_002892711.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338553|gb|EFH68970.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 307
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/269 (47%), Positives = 177/269 (65%), Gaps = 8/269 (2%)
Query: 4 KPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKEN 63
K QW +WLTP I V + +F+ M +N+CP T +++ + LGR+SFQP +EN
Sbjct: 11 KHRGDTQWTSWLTPTIVVANVAIFIVVMFINDCPKTTRGANEDCVAKFLGRFSFQPLREN 70
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LLGPS STL LG LD +V+ N+K+RL+++MWLHAGI HL NM +++ RLEQ+
Sbjct: 71 PLLGPSSSTLEKLGALDWRKVVQGNEKWRLITAMWLHAGIFHLFTNMFNVIFFGIRLEQQ 130
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YL+SGFGGS+LS L + +SVGASGAL GL+G MLSEL+ NWTIY +
Sbjct: 131 FGFLRIGLIYLISGFGGSILSALFLQNS---ISVGASGALLGLIGAMLSELVINWTIYES 187
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L + +IAL+LA G +P VDN AHIGG +G LGFIL ++PQ G+ E
Sbjct: 188 KLCALFSILFIIALDLAIGLLP---WVDNFAHIGGLLTGFFLGFILLIQPQLGW-EESRN 243
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLV 272
++ Y A+ + KY Q + + IA +L+V
Sbjct: 244 SSQYGARAKS-KYNPCQYVLFFIAAVLVV 271
>gi|242040475|ref|XP_002467632.1| hypothetical protein SORBIDRAFT_01g031210 [Sorghum bicolor]
gi|241921486|gb|EER94630.1| hypothetical protein SORBIDRAFT_01g031210 [Sorghum bicolor]
Length = 335
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/272 (47%), Positives = 177/272 (65%), Gaps = 13/272 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRD-----ILGRYSFQPWKEN 63
+W W P++ V I++F M+VNNCPA + L R+SFQP EN
Sbjct: 37 REWVPWFVPLVAAVNIVLFAVAMYVNNCPAHASRRGGGGAGACVARGFLHRFSFQPLSEN 96
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LLGPS +TL+ LG L + +V+++Q +RL++ +WLHAG+ HL+ NM SL+L+ RLEQ+
Sbjct: 97 PLLGPSSATLQKLGALVWDKVVQEHQGWRLVTCIWLHAGVAHLLANMVSLVLIGLRLEQQ 156
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FG+ RI +YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIY+N
Sbjct: 157 FGYVRIGIIYLVSGVGGSVLSSLF---VRNTISVGASGALFGLLGAMLSELFTNWTIYSN 213
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L L VIA+NLA G +P VDN AHIGGF +G LLGF+ +RP YG++ ++Y+
Sbjct: 214 KAAALVTLLIVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFVFLMRPHYGWM-QRYV 269
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
D K+ KY+ YQ +A +L V+G+
Sbjct: 270 LPS-DVKYTSKKYLAYQWALLAVASVLAVVGF 300
>gi|217072548|gb|ACJ84634.1| unknown [Medicago truncatula]
gi|388512075|gb|AFK44099.1| unknown [Medicago truncatula]
Length = 326
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/254 (50%), Positives = 170/254 (66%), Gaps = 7/254 (2%)
Query: 6 YAPE-QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENY 64
Y PE W +WL P+ V +++FV M++NNCP+K + LGR+SFQP KEN
Sbjct: 29 YDPETSWTSWLVPMFVVANLVVFVVAMYINNCPSKNLGFDGACVLKFLGRFSFQPLKENP 88
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
LLGPS TL +G L + +V +Q +RL+S +WLHAGIIHL NM SL+ + RLEQ+F
Sbjct: 89 LLGPSSETLTKMGALKWDAVVNHHQGWRLVSCIWLHAGIIHLAANMISLVFIGIRLEQQF 148
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
GF RI +YL+SGFGGS+LS L ++ +SVGASGALFGLLG MLSELI NW+IY NK
Sbjct: 149 GFVRIGIVYLVSGFGGSILSALF---IRKSISVGASGALFGLLGAMLSELITNWSIYTNK 205
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
+L L +I +NL G +P VDN AHIGGF +G LLGFI RPQ+G+++++++
Sbjct: 206 VAALMTLLFIIVINLVIGMLP---HVDNFAHIGGFLTGFLLGFIFLPRPQFGWLAQRHVP 262
Query: 245 AGYDAKHRQPKYMH 258
AG K + Y +
Sbjct: 263 AGVRLKSKYKVYQY 276
>gi|125532680|gb|EAY79245.1| hypothetical protein OsI_34361 [Oryza sativa Indica Group]
Length = 332
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/267 (48%), Positives = 178/267 (66%), Gaps = 9/267 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P I V +++F M+VNNCP+ + CV L R+SFQP EN LLGP
Sbjct: 40 REWVPWLVPAILVANVVVFAVAMYVNNCPSHASRGGACV-AGFLRRFSFQPLSENPLLGP 98
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL+ +G L + +V ++Q +RL++ +WLHAG++HL+ NM SL+L+ RLEQ+FG+ R
Sbjct: 99 SSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMR 158
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIY NK +L
Sbjct: 159 IGIIYLVSGIGGSVLSSLFIRNS---ISVGASGALFGLLGAMLSELFTNWTIYTNKAAAL 215
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L VIA+NLA G +P VDN AHIGGF +G LLGFI +RP YG++ ++Y+
Sbjct: 216 VTLLIVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFIFLMRPHYGWM-QRYVLPS-S 270
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGY 275
K+ KY+ YQ + +A +L V+G+
Sbjct: 271 VKYTSKKYLAYQWILLAVASVLAVIGF 297
>gi|224122384|ref|XP_002318821.1| predicted protein [Populus trichocarpa]
gi|222859494|gb|EEE97041.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/267 (49%), Positives = 176/267 (65%), Gaps = 12/267 (4%)
Query: 11 WRAWLTPVIFVVCIIMFVYTMHVNNCPAK--TADSHQCVLRDILGRYSFQPWKENYLLGP 68
W +WL P+ V +++F+ M++NNCP T +C R LGR+SF+P K+N L GP
Sbjct: 8 WTSWLVPMFVVAHVVVFIVVMYINNCPKHLHTRFEGKCAAR-FLGRFSFEPLKDNPLFGP 66
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL G L+ +V K+Q +RL+S +WLHAGIIHL+ NM SL+ + RLEQ+FGF R
Sbjct: 67 SSATLERFGALEWTKVVHKHQGWRLISCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVR 126
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +YLLSGFGGS+LS L + +SVGASGALFGLLG MLSELI NW+IY NK +L
Sbjct: 127 IGIVYLLSGFGGSVLSSLFIRNS---ISVGASGALFGLLGAMLSELITNWSIYTNKTAAL 183
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L + A+NLA G +P VDN AHIGGF SG LLGF+L R QYG+ + + +G
Sbjct: 184 FTLLVITAINLAIGILP---RVDNFAHIGGFLSGFLLGFVLLPRSQYGWQGRRNLPSGVG 240
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGY 275
K K YQ W++++ LL++G+
Sbjct: 241 FK---SKLKAYQYALWLVSVALLIVGF 264
>gi|302765296|ref|XP_002966069.1| hypothetical protein SELMODRAFT_84059 [Selaginella moellendorffii]
gi|300166883|gb|EFJ33489.1| hypothetical protein SELMODRAFT_84059 [Selaginella moellendorffii]
Length = 335
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/247 (52%), Positives = 168/247 (68%), Gaps = 13/247 (5%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
+WL P+ V +I+F+ TM+VNNCP +S C L L R SF+ ++N LLGPS T
Sbjct: 9 SWLIPLFVVANVIVFIVTMYVNNCPK---NSFNCRL-TFLKRLSFESLRDNPLLGPSSET 64
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L+ +G L+ L+V+K+Q +RL+S MWLHAG++HL+ NM L+L+ RLE+EFGF +I L
Sbjct: 65 LKKMGALNSTLVVKKHQGWRLISCMWLHAGVLHLLANMICLLLIGIRLEREFGFVKIGLL 124
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YLLSGFGGSLLS L + + +SVGASGALFGLLG M+SELI NW+IY+NK +L L
Sbjct: 125 YLLSGFGGSLLSALFIQDR---ISVGASGALFGLLGAMVSELITNWSIYSNKIAALITLV 181
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA---AGYDA 249
+I +NLA G +P VDN AHIGGF SG LLGF+L +RPQ G+V + A G
Sbjct: 182 IIIGINLAVGILP---HVDNFAHIGGFVSGFLLGFVLLMRPQLGWVRHQGHAGMPGGAPV 238
Query: 250 KHRQPKY 256
K R Y
Sbjct: 239 KSRHKIY 245
>gi|413925083|gb|AFW65015.1| hypothetical protein ZEAMMB73_264327 [Zea mays]
Length = 322
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/255 (49%), Positives = 166/255 (65%), Gaps = 12/255 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCP---AKTADSHQCVLRDILGRYSFQPWKENYL 65
+W WL P + V CI +F M VN+CP + CV +L R+SFQP +EN L
Sbjct: 27 RRWWPWLVPTVLVACIAVFAAEMFVNDCPRHGSTLGGGAGCVAAGLLRRFSFQPLRENPL 86
Query: 66 LGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
GPS +TL +G L+ +V ++Q +RL+S +WLHAG++HLVVNM SL+ + RLEQ+FG
Sbjct: 87 FGPSSATLEKMGALNWAKVVHEHQGWRLISCIWLHAGLVHLVVNMLSLLFIGIRLEQQFG 146
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
F RI +YL+SGFGGS+LS L VSVGASGALFGLLG+MLSELI NWTIY+NK
Sbjct: 147 FVRIGVIYLISGFGGSVLSALFL--HSNYVSVGASGALFGLLGSMLSELIINWTIYSNKA 204
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
++ L +I +NLA G +P DN AHIGGFASG L+GF+L RPQ+G++ +
Sbjct: 205 AAIITLLFIIVINLAIGILP---HADNFAHIGGFASGFLIGFVLLARPQFGWMERSEL-- 259
Query: 246 GYDAKHRQPKYMHYQ 260
+ PKY YQ
Sbjct: 260 --PQTSQPPKYKSYQ 272
>gi|449494245|ref|XP_004159491.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 322
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 183/269 (68%), Gaps = 10/269 (3%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
+ +QW +WL P+ V + MF+ M+VNNCP + S +CV R LGR+SF+P + N L
Sbjct: 29 SEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHSLGSEECVAR-FLGRFSFEPLRVNPLF 87
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS STL+ LG L+ IV +Q +RL++ +WLHAG+IHL+ NM SL+ + RLEQ+FGF
Sbjct: 88 GPSSSTLQKLGALEWEKIVHGHQAWRLITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 147
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R+ LYLLSG GGS+LS L + +SVGASGALFGLLG MLSEL+ NWTIY +K
Sbjct: 148 IRVGILYLLSGLGGSILSSLFIQNN---ISVGASGALFGLLGAMLSELLTNWTIYTDKAA 204
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L +I +NLA G +P VDN AHIGGF +G LLGFIL LRPQ+G++ +++ A
Sbjct: 205 ALITLIVIIVINLAVGILP---HVDNFAHIGGFLTGFLLGFILLLRPQFGWIERRHLPAN 261
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLGY 275
A PK+ YQ + +AL LL++G+
Sbjct: 262 SRAV---PKHKLYQYILCFVALALLIVGF 287
>gi|449460471|ref|XP_004147969.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 322
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 183/269 (68%), Gaps = 10/269 (3%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
+ +QW +WL P+ V + MF+ M+VNNCP + S +CV R LGR+SF+P + N L
Sbjct: 29 SEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHSLGSEECVAR-FLGRFSFEPLRVNPLF 87
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS STL+ LG L+ IV +Q +RL++ +WLHAG+IHL+ NM SL+ + RLEQ+FGF
Sbjct: 88 GPSSSTLQKLGALEWEKIVHGHQAWRLITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 147
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R+ LYLLSG GGS+LS L + +SVGASGALFGLLG MLSEL+ NWTIY +K
Sbjct: 148 IRVGILYLLSGLGGSILSSLFIQNN---ISVGASGALFGLLGAMLSELLTNWTIYTDKAA 204
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L +I +NLA G +P VDN AHIGGF +G LLGFIL LRPQ+G++ +++ A
Sbjct: 205 ALITLIVIIVINLAVGILP---HVDNFAHIGGFLTGFLLGFILLLRPQFGWIERRHLPAN 261
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLGY 275
A PK+ YQ + +AL LL++G+
Sbjct: 262 SRAV---PKHKLYQYILCFVALALLIVGF 287
>gi|357148757|ref|XP_003574883.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 321
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/256 (49%), Positives = 165/256 (64%), Gaps = 14/256 (5%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTAD----SHQCVLRDILGRYSFQPWKENY 64
QW WL P + C+ +F M+ N+CP + CV L R++FQP +EN
Sbjct: 26 RQWWPWLVPAVLGACVTVFAVEMYNNDCPRHGSTLGGGDAPCV-AGFLRRFAFQPLRENP 84
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
LLGPS +TL LG LD +V ++Q +RL+S +WLHAG+IHL+VNM SL+ + RLEQ+F
Sbjct: 85 LLGPSSATLEKLGALDWAKVVHQHQGWRLISCIWLHAGLIHLIVNMLSLLFIGIRLEQQF 144
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
GF RI +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSELI NWTIY+NK
Sbjct: 145 GFVRIGIIYLLSGFGGSVLSALFL--RNHYISVGASGALFGLLGSMLSELIMNWTIYSNK 202
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
++ L +I +NLA G +P DN AHIGGF SG L+GF+L RPQ+G++ +
Sbjct: 203 AAAIITLLFIIVINLAIGILP---HADNFAHIGGFVSGFLIGFVLLARPQFGWMERNEL- 258
Query: 245 AGYDAKHRQPKYMHYQ 260
+ PKY YQ
Sbjct: 259 ---PQTDQPPKYKTYQ 271
>gi|445067421|gb|AGE14563.1| rhomboid [Triticum aestivum]
Length = 323
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 122/252 (48%), Positives = 167/252 (66%), Gaps = 8/252 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W W+ PV + +F M+ NNCPA +CV L R++FQP +N LLGP
Sbjct: 30 REWVPWIVPVFVAANVALFAVAMYANNCPAHARGRRKCVGAGFLRRFAFQPLSQNPLLGP 89
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL+ LG L + +V ++Q +RL++ +WLHAG++HL+ NM SL+LV RLEQ+FGF R
Sbjct: 90 SSATLQKLGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQQFGFVR 149
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+ +YL+SG GGS++S L ++ +SVGASGALFGLLG MLSEL NWTIY NK +L
Sbjct: 150 VGVIYLVSGVGGSVMSSLF---IRDNISVGASGALFGLLGAMLSELFTNWTIYTNKAAAL 206
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L VIA+NLA G +P VDN AHIGGF +G LLGF+L +RP YG+ +++Y+
Sbjct: 207 VTLLFVIAVNLAIGILP---HVDNFAHIGGFLTGFLLGFVLLMRPHYGW-AQRYVLPS-S 261
Query: 249 AKHRQPKYMHYQ 260
K K++ YQ
Sbjct: 262 VKDVGRKFLAYQ 273
>gi|255539517|ref|XP_002510823.1| KOM, putative [Ricinus communis]
gi|223549938|gb|EEF51425.1| KOM, putative [Ricinus communis]
Length = 325
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/257 (49%), Positives = 166/257 (64%), Gaps = 12/257 (4%)
Query: 6 YAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQ--CVLRDILGRYSFQPWKEN 63
Y QW +WL P+ V + +F+ M++NNCP + CV R LGR+SF+P ++N
Sbjct: 26 YKETQWTSWLVPMFVVANVSVFIIVMYMNNCPDHFHPRFEGKCVAR-FLGRFSFEPLRDN 84
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
L GPS +TL +G L +V +Q +RL++ +WLHAGIIHL+ NM L+ + RLEQ+
Sbjct: 85 PLFGPSSATLTKMGALQWEKVVHGHQGWRLVTCIWLHAGIIHLLANMLCLVFIGVRLEQQ 144
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YL+SGF GS+LS L + +SVGASGALFGLLG MLSELI NWT+Y N
Sbjct: 145 FGFVRIGIIYLVSGFAGSVLSSLFIRNS---ISVGASGALFGLLGAMLSELITNWTLYTN 201
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L L +IA+NLA G +P VDN AHIGGF SG LLGFIL RPQ+G++ + +
Sbjct: 202 KAAALLTLLVIIAINLAIGILP---HVDNFAHIGGFLSGFLLGFILLARPQFGWLESQNV 258
Query: 244 AAGYDAKHRQPKYMHYQ 260
A K KY YQ
Sbjct: 259 PASVGVK---SKYKGYQ 272
>gi|226532718|ref|NP_001149879.1| membrane protein [Zea mays]
gi|194700888|gb|ACF84528.1| unknown [Zea mays]
gi|195635233|gb|ACG37085.1| membrane protein [Zea mays]
gi|414864370|tpg|DAA42927.1| TPA: membrane protein [Zea mays]
Length = 322
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 135/267 (50%), Positives = 184/267 (68%), Gaps = 11/267 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL PVIFV I +FV TM+ NNCPA+ D+++CV R LGR+SFQP ++N L GP
Sbjct: 32 REWVPWLVPVIFVASITVFVVTMYANNCPAR--DTNKCVAR-FLGRFSFQPLRQNPLFGP 88
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL +G L +V ++Q +RLLSSMWLHAG+IHLV NM L+ + RLEQ+FG+ R
Sbjct: 89 SSATLTKMGALVWEKVVHRHQGWRLLSSMWLHAGVIHLVANMLCLLFIGMRLEQQFGYVR 148
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +Y+LSG GG++LS L + + V+VGASGAL GLLG MLSEL+ NWTIY NK ++
Sbjct: 149 IGAIYVLSGVGGAVLSSLVVRNR---VTVGASGALLGLLGAMLSELLTNWTIYTNKAAAV 205
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
+ L SV A+NL G +P VDNLAH+GGF +G LLGF++ +RP G++ + AG
Sbjct: 206 ATLLSVAAVNLVLGVLP---HVDNLAHLGGFLAGFLLGFVVLMRPHLGWMERYGLPAGAP 262
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGY 275
R KY+ YQ +A+I+L++G+
Sbjct: 263 CTAR--KYLAYQWTLLAVAIIILLVGF 287
>gi|302776526|ref|XP_002971421.1| hypothetical protein SELMODRAFT_172130 [Selaginella moellendorffii]
gi|300160553|gb|EFJ27170.1| hypothetical protein SELMODRAFT_172130 [Selaginella moellendorffii]
Length = 379
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/265 (50%), Positives = 181/265 (68%), Gaps = 10/265 (3%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
+WL P+ V +I+F+ TM+VNNCP +S C L L R SF+ ++N LLGPS T
Sbjct: 45 SWLIPLFVVANVIVFIVTMYVNNCPK---NSFNCRL-TFLKRLSFESLRDNPLLGPSSET 100
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L+ +G L+ L+V+++Q +RL+S MWLHAG++HL+ NM L+L+ RLE+EFGF +I L
Sbjct: 101 LKKMGALNSTLVVKRHQGWRLISCMWLHAGVLHLLANMICLLLIGIRLEREFGFVKIGLL 160
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YLLSGFGGSLLS L + + +SVGASGALFGLLG M+SELI NW+IY+NK +L L
Sbjct: 161 YLLSGFGGSLLSALFIQDR---ISVGASGALFGLLGAMVSELITNWSIYSNKIAALITLV 217
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHR 252
+I +NLA G +P VDN AHIGGF SG LLGF+L +RPQ G+V + A
Sbjct: 218 IIIGINLAVGILP---HVDNFAHIGGFVSGFLLGFVLLMRPQLGWVRHQGHAGMPGGAPV 274
Query: 253 QPKYMHYQQLCWIIALILLVLGYIT 277
+ ++ YQ + I+A++LLV GY T
Sbjct: 275 KSRHKIYQIVLLIVAVLLLVAGYST 299
>gi|242074036|ref|XP_002446954.1| hypothetical protein SORBIDRAFT_06g025770 [Sorghum bicolor]
gi|241938137|gb|EES11282.1| hypothetical protein SORBIDRAFT_06g025770 [Sorghum bicolor]
Length = 340
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/248 (50%), Positives = 164/248 (66%), Gaps = 15/248 (6%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
+WL P++ + + MFV M NNCP D CV R L R+SFQP KEN LLGP+ +T
Sbjct: 58 SWLVPLVVIANVAMFVVVMFYNNCPRGGGD---CVGRGFLRRFSFQPLKENPLLGPTAAT 114
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L+ G LD +V NQ +RL S WLHAG+IHL+ NM SL+ + RLEQ+FGF R+ +
Sbjct: 115 LQKYGALDWYKVVHGNQAWRLESCTWLHAGLIHLLANMISLIFIGVRLEQQFGFWRVGLV 174
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YL+SGFGGS+LS L ++ VSVGASGALFGLLG MLSELI NW+IY N+ ++ L
Sbjct: 175 YLVSGFGGSVLSVLF---IRKGVSVGASGALFGLLGAMLSELITNWSIYTNRFAAMLNLI 231
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHR 252
+ A+NLA G +P VDN AHIGGFA+G LLGF+L ++PQ+G++ + Y
Sbjct: 232 IIAAINLALGILP---HVDNFAHIGGFATGFLLGFVLLIQPQFGWLEQPY------GSKT 282
Query: 253 QPKYMHYQ 260
+ KY YQ
Sbjct: 283 KSKYKAYQ 290
>gi|297810841|ref|XP_002873304.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319141|gb|EFH49563.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 129/256 (50%), Positives = 168/256 (65%), Gaps = 15/256 (5%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQ----CVLRDILGRYSFQPWKENY 64
+W +WL P+ V + +FV M VNNCP K +SH+ CV R LGR SF+P + N
Sbjct: 51 SRWTSWLVPMFVVANVAIFVVAMFVNNCP-KHFESHRLRGNCVAR-FLGRLSFEPLRTNP 108
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
L GPS TL LG L+ + +V K + +RLL+ +WLHAG+IHL NM SL+ + RLEQ+F
Sbjct: 109 LFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLIFIGIRLEQQF 168
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
GF RI +YLLSG GGS+LS L + +SVGASGALFGLLG+MLSEL NWTIY+NK
Sbjct: 169 GFVRIGVIYLLSGIGGSVLSSLFIRNS---ISVGASGALFGLLGSMLSELFTNWTIYSNK 225
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
+L L VI +NLA G +P VDN AH+GGF +G LLGFIL RPQ+ +++ ++
Sbjct: 226 IAALLTLLFVILINLAIGILP---HVDNFAHVGGFVTGFLLGFILLARPQFKWLARVHMP 282
Query: 245 AGYDAKHRQPKYMHYQ 260
G ++ KY YQ
Sbjct: 283 QGTPLRY---KYKPYQ 295
>gi|356559853|ref|XP_003548211.1| PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max]
Length = 329
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/271 (51%), Positives = 183/271 (67%), Gaps = 12/271 (4%)
Query: 6 YAPE-QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTAD-SHQCVLRDILGRYSFQPWKEN 63
Y PE W +WL P+ V +++FV M++N+CP K +CV R LGR+SFQP +EN
Sbjct: 32 YDPEVHWTSWLVPLFVAVNVVVFVVAMYLNDCPRKNLGFEGECVAR-FLGRFSFQPLREN 90
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
L GPS STL +G L + +V +Q +RL++ +WLHAG++HL NM SL+ + RLEQ+
Sbjct: 91 PLFGPSSSTLTKMGALRWDDVVNHHQAWRLVTCIWLHAGVVHLAANMLSLVFIGIRLEQQ 150
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YLLSGFGGS+LS L + +SVGASGALFGLLG MLSELI NW+IY N
Sbjct: 151 FGFVRIGIIYLLSGFGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELITNWSIYTN 207
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L L +I +NLA G +P VDN AHIGGF +G LLGFIL LRPQ+G++ ++
Sbjct: 208 KAAALFTLLFIIVINLAIGMLP---HVDNFAHIGGFLTGFLLGFILLLRPQFGWLEQRRP 264
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
AG K KY YQ + WI++ ILL++G
Sbjct: 265 PAGVRLK---SKYKAYQYVLWIVSAILLIVG 292
>gi|226494811|ref|NP_001140268.1| uncharacterized protein LOC100272312 [Zea mays]
gi|194698764|gb|ACF83466.1| unknown [Zea mays]
gi|195610418|gb|ACG27039.1| membrane protein [Zea mays]
gi|413919340|gb|AFW59272.1| membrane protein [Zea mays]
Length = 340
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 170/273 (62%), Gaps = 30/273 (10%)
Query: 2 ENKPYAP--------------EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCV 47
N PY P W +WL P++ + ++MFV M NNCP D CV
Sbjct: 34 SNGPYTPPSPFYYDPAAAHGRHHW-SWLVPLVVIANVLMFVLVMFYNNCPRSGGD---CV 89
Query: 48 LRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLV 107
R L R+SFQP KEN LLGP+ +TL+ G LD +V NQ +RL S WLHAG+IHL+
Sbjct: 90 GRGFLRRFSFQPLKENPLLGPTAATLQRYGALDWYKVVHGNQAWRLESCTWLHAGLIHLL 149
Query: 108 VNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLL 167
NM SL+ + RLEQ+FGF ++ +YL+SGFGGS+LS ++ VSVGASGALFGLL
Sbjct: 150 ANMISLIFIGVRLEQQFGFWKVGLVYLVSGFGGSVLSVFF---IRKGVSVGASGALFGLL 206
Query: 168 GTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
G MLSELI NW+IY N+ ++ L + A+NLA G +P VDN AHIGGFA+G LLGF
Sbjct: 207 GAMLSELITNWSIYTNRFAAMLNLIIIAAINLALGILP---HVDNFAHIGGFATGFLLGF 263
Query: 228 ILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQ 260
+L ++PQ+G++ + + A + KY YQ
Sbjct: 264 VLLIQPQFGWLEQPFGA------KTKSKYKAYQ 290
>gi|356534153|ref|XP_003535622.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 369
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 184/272 (67%), Gaps = 11/272 (4%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSH-QCVLRDILGRYSFQPWKENYL 65
+ W +WL P+ V I +FV TM++NNCP +CV R LGR+SFQP +EN L
Sbjct: 34 SETHWTSWLVPMFVVANIAVFVITMYINNCPRNNIRFQGRCVAR-FLGRFSFQPMQENPL 92
Query: 66 LGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
LGPS STL +G L + +V ++Q +RL++ +WLHAG+IHL+ NM SL+ + RLEQ+FG
Sbjct: 93 LGPSSSTLTKMGALRWDNVVNRHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 152
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
F +I +YL+SGFGGS+LS L ++ +SVGASGALFGLLG MLSELI NWTIY+NK
Sbjct: 153 FIKIGIIYLVSGFGGSVLSSLF---IRDHISVGASGALFGLLGAMLSELITNWTIYSNKA 209
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
+L L +I +NL G +P VDN AHIGGF G+LLGFIL RPQ+G++ ++ + A
Sbjct: 210 MALITLLVIIVINLGIGILP---HVDNFAHIGGFLVGLLLGFILLPRPQFGWLEQRRLPA 266
Query: 246 GYDAKHRQPKYMHYQQLCWIIALILLVLGYIT 277
G K KY +Q + +++LILL+ G T
Sbjct: 267 GVQMK---SKYKTHQYVLGVVSLILLIAGLST 295
>gi|357454153|ref|XP_003597357.1| Rhomboid family protein AtRBL1 [Medicago truncatula]
gi|355486405|gb|AES67608.1| Rhomboid family protein AtRBL1 [Medicago truncatula]
Length = 383
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 182/270 (67%), Gaps = 9/270 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+QW WL P +++F++TM+VN+CP H + LGR+SFQP KEN L GP
Sbjct: 42 KQWVPWLIPTFVFANVVVFIFTMYVNDCPENAF--HGTCVAPFLGRFSFQPLKENPLFGP 99
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TL+ +G L+ + +V +++ +RL+S +WLH G IH++ NM SL+ + RLEQEFGF R
Sbjct: 100 SSFTLQKMGALEVDKVVHEHEGWRLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEFGFVR 159
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LY++SGFGGSLLS L + +SVGASGALFGLLG MLSEL NWTIYANK +L
Sbjct: 160 IGFLYVISGFGGSLLSSLFIQTG---ISVGASGALFGLLGGMLSELFINWTIYANKMAAL 216
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L ++ +NLA G +P VDN AH+GGF SG LGF++ +RPQ+ ++S++ +G
Sbjct: 217 LTLIIIVVINLAVGVLP---HVDNFAHLGGFGSGFFLGFVVLIRPQFKWISQQQSKSGSH 273
Query: 249 A-KHRQPKYMHYQQLCWIIALILLVLGYIT 277
A +Q KY+ YQ + W+++ +LL+ G+I
Sbjct: 274 AFSVKQNKYLPYQYVLWVLSFLLLIAGFIA 303
>gi|218187509|gb|EEC69936.1| hypothetical protein OsI_00380 [Oryza sativa Indica Group]
Length = 428
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 187/288 (64%), Gaps = 22/288 (7%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPA--------------KTADSHQCV 47
E +P+ +W +L P+ VV + +FV TM++N+CPA + A S C
Sbjct: 67 EFRPF--RRWFPFLVPLFVVVNVALFVVTMYINDCPAHMQATGDAIGGDVGEGAASQGCW 124
Query: 48 LRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLV 107
L LGR++FQ +KEN L+GPS +TL +G L+ + + ++ +RL++ +WLHAG++H++
Sbjct: 125 LEPELGRFAFQSYKENPLIGPSSATLLKMGALETSKVTNDHEGWRLITCIWLHAGVVHIL 184
Query: 108 VNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLL 167
NM SL+L+ RLE+EFGF RI LY++SG GGSLLS L +SVGASGALFGLL
Sbjct: 185 ANMLSLLLIGIRLEKEFGFMRIGTLYVISGVGGSLLSALFMVSN---ISVGASGALFGLL 241
Query: 168 GTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
G+MLSELI NWTIY NK +L L +I +NLA G +P VDN AH+GGF SG LGF
Sbjct: 242 GSMLSELITNWTIYENKFAALLTLVIIILINLAVGILP---HVDNFAHLGGFTSGFFLGF 298
Query: 228 ILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
+L +RPQ+GY+++K G + KY YQ + W+IA ++L+ G+
Sbjct: 299 VLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLILISGF 346
>gi|326532882|dbj|BAJ89286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/255 (47%), Positives = 166/255 (65%), Gaps = 11/255 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTA---DSHQCVLRDILGRYSFQPWKENYL 65
+W W+ PV + +F M+ NNCPA +CV +L R++F+P +N L
Sbjct: 29 REWVPWIVPVFVAANVALFAVAMYANNCPAHARGGRSGRRCVGAGLLRRFAFEPLSQNPL 88
Query: 66 LGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
LGPS +TL+ LG L +V + Q +RL++ +WLHAG++HL+ NM SL+LV RLEQ+FG
Sbjct: 89 LGPSSATLQKLGALVWEKVVHEQQGWRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQQFG 148
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
F R+ +YL+SG GGS++S L ++ +SVGASGALFGLLG MLSEL NWTIY NK
Sbjct: 149 FVRVGVIYLVSGVGGSVMSSLF---IRDNISVGASGALFGLLGAMLSELFTNWTIYTNKA 205
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
+L L VIA+NLA G +P VDN AHIGGF +G LLGF+L +RP YG+ +++Y+
Sbjct: 206 AALVTLLFVIAVNLAIGILP---HVDNFAHIGGFLTGFLLGFVLLMRPHYGW-AQRYVLP 261
Query: 246 GYDAKHRQPKYMHYQ 260
K K++ YQ
Sbjct: 262 S-SVKDVGRKFLAYQ 275
>gi|7629998|emb|CAB88340.1| putative protein [Arabidopsis thaliana]
Length = 361
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/269 (48%), Positives = 178/269 (66%), Gaps = 22/269 (8%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
W WL P V + +FV TM+VNNCP K+ D D LGR+SFQ +EN LLGP
Sbjct: 34 RSWFPWLIPCFVVANVAVFVITMYVNNCPKKSGD----CFADFLGRFSFQNTRENPLLGP 89
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TL+ +GGLD +V+ ++ +RLLS WLH G++HL++NM +L+ + R+E R
Sbjct: 90 SSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRME-----LR 144
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I LYL+SGFGGS+LS L + +SVGASGA+FGLLG MLSE+ NWTIY+NK ++
Sbjct: 145 IGLLYLISGFGGSILSALFLRSN---ISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTI 201
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L ++A+NL G +P GVDN AHIGGFA+G LLGF+L +RP YG+++++ G
Sbjct: 202 VTLVLIVAVNLGLGVLP---GVDNFAHIGGFATGFLLGFVLLIRPHYGWINQR---NGPG 255
Query: 249 AK-HRQPKYMHYQQLCWIIALILLVLGYI 276
AK HR + YQ + W I+L++LV G+I
Sbjct: 256 AKPHR---FKIYQGILWTISLLILVAGFI 281
>gi|363808368|ref|NP_001242000.1| uncharacterized protein LOC100784671 [Glycine max]
gi|255639055|gb|ACU19828.1| unknown [Glycine max]
Length = 330
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/271 (51%), Positives = 183/271 (67%), Gaps = 12/271 (4%)
Query: 6 YAPE-QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTAD-SHQCVLRDILGRYSFQPWKEN 63
Y PE W +WL P+ V +++F M+VN+CP K CV R LGR+SFQP +EN
Sbjct: 33 YDPEVHWTSWLVPLFVAVNVVVFFVVMYVNDCPRKNLGFEGDCVAR-FLGRFSFQPLREN 91
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
L GPS STL +G L + +V +Q +RL++ +WLHAG++HL NM SL+ + RLEQ+
Sbjct: 92 PLFGPSSSTLTKMGALRWDDVVNHHQAWRLVTCIWLHAGVVHLAANMLSLVFIGIRLEQQ 151
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YLLSGFGGS+LS L + +SVGASGALFGLLG MLSELI NW+IY N
Sbjct: 152 FGFVRIGIIYLLSGFGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELITNWSIYTN 208
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +L L +I +NLA G +P VD+ AHIGGF SG LLGFIL LRPQ+G++ ++ +
Sbjct: 209 KAAALFTLLFIIVINLAIGMLP---HVDDFAHIGGFLSGFLLGFILLLRPQFGWLEQQRL 265
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
AG H + KY YQ + WI++ ILL++G
Sbjct: 266 HAGV---HLKSKYKAYQYVLWIVSAILLIVG 293
>gi|326488163|dbj|BAJ89920.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326499095|dbj|BAK06038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/236 (50%), Positives = 159/236 (67%), Gaps = 8/236 (3%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCP--AKTADSHQCVLRDILGRYSFQPWKENYLL 66
Q WL P++ + + MF+ M+ N+CP + + CV R +L R+SFQP KEN L
Sbjct: 51 RQHHTWLVPLVVLANVAMFIVVMYYNDCPRNGRGGAAADCVGRGVLRRFSFQPLKENPLF 110
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS +TL GGLDR +V N+ +RL +S WLHAG+IHL NM SL+ V RLEQ+FGF
Sbjct: 111 GPSSATLGKYGGLDRYKVVHGNEAWRLETSTWLHAGLIHLGANMISLIFVGVRLEQQFGF 170
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
++ +YL SG GGS+LS L + VSVGASGALFGLLG MLSELI NWTIY N+
Sbjct: 171 WKVGLVYLFSGLGGSVLSVLF---IRNGVSVGASGALFGLLGAMLSELITNWTIYTNRLA 227
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+++ L + A+NLA G +P VDN AHIGGF +G LLGF+L ++P++G++ + +
Sbjct: 228 AMANLIIIAAINLALGILP---HVDNFAHIGGFLTGFLLGFVLLIQPRFGWLEQPF 280
>gi|147777535|emb|CAN75940.1| hypothetical protein VITISV_040961 [Vitis vinifera]
Length = 292
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/268 (50%), Positives = 181/268 (67%), Gaps = 9/268 (3%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
+ W +WL P+ V + +FV M+VN+CP K + L R SFQP +EN L
Sbjct: 34 SETHWTSWLIPMFVVANVAVFVVVMYVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLF 93
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS STL LGGL+ N +V +Q +RL++ +WLHAG+IHL+ NM SL+ + RLEQ+FGF
Sbjct: 94 GPSSSTLEKLGGLEWNKVVYGDQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 153
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
RI +YL+SGFGGS+LS L + +SVGASGALFGLLG MLSELI NW+IY NK
Sbjct: 154 VRIGIIYLVSGFGGSILSSLF---IQHNISVGASGALFGLLGAMLSELITNWSIYTNKAA 210
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L +IA+NLA G +P VDN AHIGGF +G LLGF+L LRPQ+G+V ++ A
Sbjct: 211 ALFTLVVIIAINLAVGILP---HVDNFAHIGGFLTGFLLGFMLLLRPQFGWVKRQHRPA- 266
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLG 274
DA+ Q K+ YQ + W++A+ LL++G
Sbjct: 267 -DAR-VQSKHKVYQYVFWLVAMALLIVG 292
>gi|225426828|ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
gi|297742575|emb|CBI34724.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 181/269 (67%), Gaps = 9/269 (3%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
+ W +WL P+ V + +FV M+VN+CP K + L R SFQP +EN L
Sbjct: 34 SETHWTSWLIPMFVVANVAVFVVVMYVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLF 93
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS STL LGGL+ N +V +Q +RL++ +WLHAG+IHL+ NM SL+ + RLEQ+FGF
Sbjct: 94 GPSSSTLEKLGGLEWNKVVYGDQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 153
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
RI +YL+SGFGGS+LS L + +SVGASGALFGLLG MLSELI NW+IY NK
Sbjct: 154 VRIGIIYLVSGFGGSILSSLF---IQHNISVGASGALFGLLGAMLSELITNWSIYTNKAA 210
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L +IA+NLA G +P VDN AHIGGF +G LLGF+L LRPQ+G+V ++ A
Sbjct: 211 ALFTLVVIIAINLAVGILP---HVDNFAHIGGFLTGFLLGFMLLLRPQFGWVKRQHRPA- 266
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLGY 275
DA+ + K+ YQ W++A+ LL++G+
Sbjct: 267 -DARVKS-KHKVYQYAFWLVAMALLIVGF 293
>gi|222617736|gb|EEE53868.1| hypothetical protein OsJ_00361 [Oryza sativa Japonica Group]
Length = 335
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/259 (47%), Positives = 170/259 (65%), Gaps = 20/259 (7%)
Query: 31 MHVNNCPA--------------KTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDL 76
M++N+CPA + A S C L LGR++FQ +KEN L+GPS +TL +
Sbjct: 1 MYINDCPAHMQATGDAIGGDVGEGAASQGCWLEPELGRFAFQSYKENPLIGPSSATLLKM 60
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G L+ + + ++ +RL++ +WLHAG++H++ NM SL+L+ RLE+EFGF RI LY++S
Sbjct: 61 GALETSKVTNDHEGWRLITCIWLHAGVVHILANMLSLLLIGIRLEKEFGFMRIGTLYVIS 120
Query: 137 GFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIA 196
G GGSLLS L +SVGASGALFGLLG+MLSELI NWTIY NK +L L +I
Sbjct: 121 GVGGSLLSALFMVSN---ISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVIIIL 177
Query: 197 LNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKY 256
+NLA G +P VDN AH+GGF SG LGF+L +RPQ+GY+++K G + KY
Sbjct: 178 INLAVGILP---HVDNFAHLGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKY 234
Query: 257 MHYQQLCWIIALILLVLGY 275
YQ + W+IA ++L+ G+
Sbjct: 235 KTYQIILWVIATLILISGF 253
>gi|357444041|ref|XP_003592298.1| Rhomboid family member [Medicago truncatula]
gi|355481346|gb|AES62549.1| Rhomboid family member [Medicago truncatula]
Length = 314
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 171/276 (61%), Gaps = 26/276 (9%)
Query: 6 YAPEQWR---AWLTPVIFVVCIIMFVYTMHVNNCPAKT----ADSHQCVLRDILGRYSFQ 58
Y E R +WL P V I++F+ M +NNCP T H CV R L R+SFQ
Sbjct: 20 YVAETHRESCSWLVPAFVFVNIVVFIVVMGINNCPNTTFGFHKHHHHCVAR-FLHRFSFQ 78
Query: 59 PWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
P++EN LLGPS TL +G L +V ++Q++RL + +WLHAGIIHL+ NM L+L+
Sbjct: 79 PFRENPLLGPSSLTLIKMGALRWVNVVHQHQEWRLFTCIWLHAGIIHLLSNMLCLVLIGI 138
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
RLEQ+FGF +I +YLLSGFGGS+ S + + +SVGAS ALFGLLG M+SEL+ NW
Sbjct: 139 RLEQQFGFVKIGLIYLLSGFGGSVFSSIFIRNS---ISVGASSALFGLLGAMISELLTNW 195
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYV 238
TIY+NK +L L +IA+NL G +P VDNLAHIGG G LLGFIL RPQ
Sbjct: 196 TIYSNKVMALLTLLVMIAINLTIGLLP---RVDNLAHIGGLVVGFLLGFILLPRPQ---- 248
Query: 239 SEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
YD R+ KY YQ + I++L+LL G
Sbjct: 249 --------YDGVLRKSKYNAYQFVLGIVSLVLLTAG 276
>gi|15240744|ref|NP_196342.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
gi|7546703|emb|CAB87281.1| membrane protein [Arabidopsis thaliana]
gi|16648762|gb|AAL25572.1| AT5g07250/T28J14_190 [Arabidopsis thaliana]
gi|20466143|gb|AAM19993.1| AT5g07250/T28J14_190 [Arabidopsis thaliana]
gi|332003744|gb|AED91127.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
Length = 346
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/256 (49%), Positives = 168/256 (65%), Gaps = 15/256 (5%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQ----CVLRDILGRYSFQPWKENY 64
+W +WL P+ V + +FV M VNNCP +SH+ CV + LGR SF+P + N
Sbjct: 51 SRWTSWLVPMFVVANVAVFVVAMFVNNCP-NHFESHRLRGHCVAK-FLGRLSFEPLRTNP 108
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
L GPS TL LG L+ + +V K + +RLL+ +WLHAG+IHL NM SL+ + RLEQ+F
Sbjct: 109 LFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQF 168
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
GF RI +YLLSG GGS+LS L + +SVGASGALFGLLG+MLSEL NWTIY+NK
Sbjct: 169 GFVRIGVIYLLSGIGGSVLSSLFIRNS---ISVGASGALFGLLGSMLSELFTNWTIYSNK 225
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
+L L VI +NLA G +P VDN AH+GGF +G LLGFIL RPQ+ +++ +++
Sbjct: 226 IAALLTLLFVILINLAIGILP---HVDNFAHVGGFVTGFLLGFILLARPQFKWLAREHMP 282
Query: 245 AGYDAKHRQPKYMHYQ 260
G ++ KY YQ
Sbjct: 283 QGTPLRY---KYKTYQ 295
>gi|115483002|ref|NP_001065094.1| Os10g0521900 [Oryza sativa Japonica Group]
gi|113639703|dbj|BAF27008.1| Os10g0521900, partial [Oryza sativa Japonica Group]
Length = 338
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 156/224 (69%), Gaps = 8/224 (3%)
Query: 52 LGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMT 111
L R+SFQP EN LLGPS +TL+ +G L + +V ++Q +RL++ +WLHAG++HL+ NM
Sbjct: 88 LRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANML 147
Query: 112 SLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML 171
SL+L+ RLEQ+FG+ RI +YL+SG GGS+LS L + +SVGASGALFGLLG ML
Sbjct: 148 SLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFIRNS---ISVGASGALFGLLGAML 204
Query: 172 SELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
SEL NWTIY NK +L L VIA+NLA G +P VDN AHIGGF +G LLGFI +
Sbjct: 205 SELFTNWTIYTNKAAALVTLLIVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFIFLM 261
Query: 232 RPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
RP YG++ ++Y+ K+ KY+ YQ + +A +L V+G+
Sbjct: 262 RPHYGWM-QRYVLPS-SVKYTSKKYLAYQWILLAVASVLAVIGF 303
>gi|255635820|gb|ACU18258.1| unknown [Glycine max]
Length = 239
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 145/212 (68%), Gaps = 8/212 (3%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSH-QCVLRDILGRYSFQPWKENYL 65
+ W +WL P+ V I +FV TM++NNCP +CV R LGR+SFQP +EN L
Sbjct: 33 SETHWTSWLVPMFVVANIAVFVITMYINNCPRNNLRFQGRCVAR-FLGRFSFQPMQENPL 91
Query: 66 LGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
LGPS STL +G L + +V ++Q +RL + +WLHAG+IHL+ NM SL+ + RLEQ+FG
Sbjct: 92 LGPSSSTLTKMGALRWDNVVNRHQGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
F +I +YL+SGFGGS+LS L ++ +SVGASGALFGLLG MLSELI NWTIY+NK
Sbjct: 152 FIKIGIIYLVSGFGGSVLSSLF---IRDHISVGASGALFGLLGAMLSELITNWTIYSNKA 208
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIG 217
+L L +I +NL G +P VDN AHIG
Sbjct: 209 MALITLLVIIVINLGIGILP---HVDNFAHIG 237
>gi|297799698|ref|XP_002867733.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313569|gb|EFH43992.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 318
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 171/268 (63%), Gaps = 12/268 (4%)
Query: 10 QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPS 69
+WR+W+ P++ + +++F+ M+ N+CP K SH C L LGR+SF+ +K N LLGPS
Sbjct: 33 RWRSWIIPIVVIANVVVFIVVMYFNDCPHK---SHHC-LAKFLGRFSFESFKSNPLLGPS 88
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
STL +G L IV K Q +RL + MWLHAG+IHL+ NM + + RLEQ+FGF R+
Sbjct: 89 SSTLEKMGALAWGKIVHKRQVWRLFTCMWLHAGVIHLLANMCCVAFIGVRLEQQFGFVRV 148
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS 189
+YL+SGF GS+LSCL + +SVGAS ALFGLLG MLSEL+ NWT Y NK +L
Sbjct: 149 GTIYLVSGFCGSILSCLF---LQNAISVGASSALFGLLGAMLSELLINWTTYDNKGVALV 205
Query: 190 VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDA 249
+L ++ +NL G +P VDN AHIGGF G LLGF+L + PQ+ + E+ +
Sbjct: 206 MLLVIVGVNLGLGTLP---PVDNFAHIGGFLGGFLLGFLLLIHPQFEW--EENRVSLMPG 260
Query: 250 KHRQPKYMHYQQLCWIIALILLVLGYIT 277
+PKY Q + IIA I+ V G+ +
Sbjct: 261 TIVKPKYNTCQLVLCIIASIVFVAGFTS 288
>gi|414886371|tpg|DAA62385.1| TPA: hypothetical protein ZEAMMB73_763535 [Zea mays]
Length = 211
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 128/179 (71%), Gaps = 3/179 (1%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P + V CI +FV M+ NNCP + CV L R+SFQP +EN LLGP
Sbjct: 33 RKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLGDCV-AGFLRRFSFQPLRENPLLGP 91
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL +G LD N IV +NQ +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+FGF R
Sbjct: 92 SSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVR 151
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
I +YLLSGFGGS+LS L + +SVGASGALFGLLG+MLSEL+ NWTIY+NK ++
Sbjct: 152 IGAIYLLSGFGGSVLSALFL--RNSYISVGASGALFGLLGSMLSELLMNWTIYSNKAST 208
>gi|22122915|gb|AAM92298.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 164/267 (61%), Gaps = 12/267 (4%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P I V +++F M+VNNCP+ + CV R +E P
Sbjct: 40 REWVPWLVPAILVANVVVFAVAMYVNNCPSHASRGGACV-RIPPPLLLPASLREP---AP 95
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+G L + +V ++Q +RL++ +WLHAG++HL+ NM SL+L+ RLEQ+FG+ R
Sbjct: 96 RPLLRHKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMR 155
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
I +YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIY NK +L
Sbjct: 156 IGIIYLVSGIGGSVLSSLFIRNS---ISVGASGALFGLLGAMLSELFTNWTIYTNKAAAL 212
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
L VIA+NLA G +P VDN AHIGGF +G LLGFI +RP YG++ ++Y+
Sbjct: 213 VTLLIVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFIFLMRPHYGWM-QRYVLPS-S 267
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGY 275
K+ KY+ YQ + +A +L V+G+
Sbjct: 268 VKYTSKKYLAYQWILLAVASVLAVIGF 294
>gi|168030936|ref|XP_001767978.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680820|gb|EDQ67253.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 322
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/256 (47%), Positives = 156/256 (60%), Gaps = 8/256 (3%)
Query: 7 APEQWRAW--LTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENY 64
A R W T V II+ V M+ NNCPA +CVL R SFQPW EN
Sbjct: 20 AKRHKRCWPIFTLGAVVANIIVLVVVMYENNCPANIGYGRKCVLGSSFKRMSFQPWSENP 79
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
LLGPS +TL+ +GGL +L+V + Q +RL+S +WLHAG+ HL+VNM +L++ LE++F
Sbjct: 80 LLGPSSATLQKMGGLRTDLVVDQKQGWRLMSCVWLHAGVFHLLVNMIALLVFGIELERDF 139
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
GF RI LYL+SG GGSLLS L + +SVGASGALFGLLG SELI NW+ Y ++
Sbjct: 140 GFIRIGLLYLISGLGGSLLSSLFN---HNAISVGASGALFGLLGATTSELITNWSRYRSR 196
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
C+ L L V +NLA G +P VDN AHIGGF +G LLGFIL ++ QY YV +
Sbjct: 197 CSQLFQLIIVTGVNLAIGLLP---RVDNFAHIGGFVTGFLLGFILLMKEQYRYVQRSTLL 253
Query: 245 AGYDAKHRQPKYMHYQ 260
++ YQ
Sbjct: 254 DPRMDPQHVKRFKTYQ 269
>gi|255537321|ref|XP_002509727.1| conserved hypothetical protein [Ricinus communis]
gi|223549626|gb|EEF51114.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 155/269 (57%), Gaps = 35/269 (13%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
+ +QW +WL P V I +F+ M+VNNCP + LGR SFQP KEN L
Sbjct: 29 SDKQWTSWLIPTFVVANIAVFIAVMYVNNCPKNNLGFEGNCVAKFLGRLSFQPLKENPLF 88
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS STL ++G L+ N +V +Q +RL++ MWLHAG++HL+ NM SL+ + RLEQ+FGF
Sbjct: 89 GPSSSTLENMGALEWNKVVHGHQGWRLITCMWLHAGVVHLLANMLSLIFIGIRLEQQFGF 148
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R+ +YLL+GFGGS+LS L + +SVGAS
Sbjct: 149 VRVGLIYLLAGFGGSILSALF---IQRNISVGAS-------------------------- 179
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+L L +IA+NLA G +P VDN AHIGGF +G LGF++ LRPQ+G+ +++ A
Sbjct: 180 ALLTLVIIIAINLAVGILP---HVDNFAHIGGFLTGFFLGFVILLRPQFGWYESRHLPAD 236
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLGY 275
K R YQ +IA++LLV G+
Sbjct: 237 ARVKSRHKA---YQYAFLLIAVVLLVAGF 262
>gi|168027788|ref|XP_001766411.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682320|gb|EDQ68739.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 169/257 (65%), Gaps = 7/257 (2%)
Query: 21 VVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLD 80
V +I+F+ M+ NNCPA +CVL R SFQPW +N LLGPS +TL+ +GGL
Sbjct: 26 VANVIIFIIVMYDNNCPANIIPPDRCVLGS-FRRMSFQPWNQNPLLGPSSATLQRMGGLM 84
Query: 81 RNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGG 140
L+V + Q +RL+S +WLHAG+ HLV+NMT+L++ +LE+EFG R+ LYL+SG GG
Sbjct: 85 TFLVVDQQQGWRLMSCVWLHAGVFHLVINMTALLIFGIQLEKEFGIIRVGLLYLISGLGG 144
Query: 141 SLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLA 200
LLS L + +SVGASGALFGL G L+ELI NW+ + N+C+ L V A+N +
Sbjct: 145 GLLSTLFN---SHAISVGASGALFGLAGATLAELITNWSHFHNRCSLTWQLIIVAAVNFS 201
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQ 260
G +P VDN AHIGGF +G+LLGF+L ++ QYGYV ++ + + + ++ YQ
Sbjct: 202 IGLMP---RVDNFAHIGGFITGLLLGFVLLMKEQYGYVWQRDLVDPNIERPMKRRFKVYQ 258
Query: 261 QLCWIIALILLVLGYIT 277
+ ++ +++LL+ G+I
Sbjct: 259 IVLFVASILLLITGFIA 275
>gi|195622898|gb|ACG33279.1| membrane protein [Zea mays]
Length = 226
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 132/185 (71%), Gaps = 9/185 (4%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G LD N IV +NQ +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+FGF RI +YLL
Sbjct: 1 MGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLL 60
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SGFGGS+LS L + +SVGASGALFGLLG+MLSEL+ NWTIY+NK ++ L +I
Sbjct: 61 SGFGGSVLSALFL--RNSYISVGASGALFGLLGSMLSELLMNWTIYSNKAAAIITLLFII 118
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPK 255
ALNLA G +P VDN AHIGGFA+G LLGF+L RPQ+ ++ + ++ PK
Sbjct: 119 ALNLAIGILP---HVDNFAHIGGFATGFLLGFVLLARPQFSWMESHEL----PHTNQPPK 171
Query: 256 YMHYQ 260
Y YQ
Sbjct: 172 YKAYQ 176
>gi|15236387|ref|NP_194038.1| RHOMBOID-like protein 7 [Arabidopsis thaliana]
gi|3292833|emb|CAA19823.1| putative membrane protein [Arabidopsis thaliana]
gi|7269154|emb|CAB79262.1| putative membrane protein [Arabidopsis thaliana]
gi|332659302|gb|AEE84702.1| RHOMBOID-like protein 7 [Arabidopsis thaliana]
Length = 313
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/268 (46%), Positives = 174/268 (64%), Gaps = 12/268 (4%)
Query: 10 QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPS 69
QWR+W+ P++ + +++FV M+ N+CP K SH+C L LGR+SF+ +K N LLGPS
Sbjct: 28 QWRSWIIPIVVIANVVVFVVVMYYNDCPHK---SHRC-LAKFLGRFSFESFKSNPLLGPS 83
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
STL +G L IV K Q +RLL+ MWLHAG+IHL+ NM + + RLEQ+FGF R+
Sbjct: 84 SSTLEKMGALAWGKIVHKRQVWRLLTCMWLHAGVIHLLANMCCVAYIGVRLEQQFGFVRV 143
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS 189
+YL+SGF GS+LSCL ++ +SVGAS ALFGLLG MLSEL+ NWT Y NK ++
Sbjct: 144 GTIYLVSGFCGSILSCLF---LEDAISVGASSALFGLLGAMLSELLINWTTYDNKGVAIV 200
Query: 190 VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDA 249
+L ++ +NL G +P VDN AHIGGF G LLGF+L + PQ+ + E+ +
Sbjct: 201 MLLVIVGVNLGLGTLP---PVDNFAHIGGFFGGFLLGFLLLIHPQFEW--EENQVSLMPG 255
Query: 250 KHRQPKYMHYQQLCWIIALILLVLGYIT 277
+PKY Q + I+A I+ V G+ +
Sbjct: 256 TIVKPKYNTCQLVLCIVASIVFVAGFTS 283
>gi|18409916|ref|NP_566989.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
gi|119360121|gb|ABL66789.1| At3g53780 [Arabidopsis thaliana]
gi|332645621|gb|AEE79142.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
Length = 270
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 143/201 (71%), Gaps = 11/201 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+GGLD +V+ ++ +RLLS WLH G++HL++NM +L+ + R+E+EFGF RI LYL+
Sbjct: 1 MGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLI 60
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SGFGGS+LS L + +SVGASGA+FGLLG MLSE+ NWTIY+NK ++ L ++
Sbjct: 61 SGFGGSILSALFLRSN---ISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLIV 117
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPK 255
A+NL G +P GVDN AHIGGFA+G LLGF+L +RP YG+++++ G AK + K
Sbjct: 118 AVNLGLGVLP---GVDNFAHIGGFATGFLLGFVLLIRPHYGWINQR---NGPGAKPHRFK 171
Query: 256 YMHYQQLCWIIALILLVLGYI 276
YQ + W I+L++LV G+I
Sbjct: 172 I--YQGILWTISLLILVAGFI 190
>gi|357142172|ref|XP_003572482.1| PREDICTED: uncharacterized protein LOC100827999 [Brachypodium
distachyon]
Length = 364
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/267 (40%), Positives = 152/267 (56%), Gaps = 15/267 (5%)
Query: 12 RAW--LTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPS 69
R W P + VC+ +F M+VN+CP T + + GR SFQP EN LLGPS
Sbjct: 74 RFWPMFVPYVICVCVSVFSIVMYVNDCPGNTPGAAASCVAAGFGRVSFQPIHENPLLGPS 133
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
+TL +G LD +V +Q RL + W+HAG+IHL V SL R EQ+FGF RI
Sbjct: 134 YATLEKMGALDWAKVVHGHQISRLFTCFWVHAGLIHLFVTQLSLCSFGVRFEQQFGFLRI 193
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS 189
+YLLSG GGS+LS L VSVGASG + GL+G M+SE+ NW Y+N+ +L+
Sbjct: 194 VIIYLLSGLGGSVLSALFLPAGS--VSVGASGPVLGLIGAMVSEIAINWNAYSNRKPALA 251
Query: 190 VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP-QYGYVSEKYIAAGYD 248
+LG + +N+ G P DN +IGGF +G LLGF++ P + G++ + +
Sbjct: 252 ILGLIAVINMVMGIFP---HTDNFTNIGGFLTGFLLGFLVLADPARIGFLPQSRTS---- 304
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGY 275
QPKY Y + +L+LL++G+
Sbjct: 305 ---EQPKYKSYHYAVFGASLLLLLVGF 328
>gi|414867424|tpg|DAA45981.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 254
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 142/203 (69%), Gaps = 8/203 (3%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L+ LG L + +VR++Q +RL++ +WLHAG+ HL+ NM SL+L+ RLEQ+FG+ R+ +
Sbjct: 19 LQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGII 78
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIYANK +L L
Sbjct: 79 YLVSGVGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLL 135
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHR 252
VIA+NLA G +P VDN AHIGGF +G LLGF+L +RP YG++ ++Y A D K+
Sbjct: 136 VVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRY-ALPSDVKYT 190
Query: 253 QPKYMHYQQLCWIIALILLVLGY 275
KY+ YQ +A +L V+G+
Sbjct: 191 TKKYLAYQWALLAVASVLAVIGF 213
>gi|212722852|ref|NP_001132594.1| uncharacterized protein LOC100194066 [Zea mays]
gi|194694850|gb|ACF81509.1| unknown [Zea mays]
Length = 248
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 142/203 (69%), Gaps = 8/203 (3%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L+ LG L + +VR++Q +RL++ +WLHAG+ HL+ NM SL+L+ RLEQ+FG+ R+ +
Sbjct: 19 LQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGII 78
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIYANK +L L
Sbjct: 79 YLVSGVGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLL 135
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHR 252
VIA+NLA G +P VDN AHIGGF +G LLGF+L +RP YG++ ++Y A D K+
Sbjct: 136 VVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRY-ALPSDVKYT 190
Query: 253 QPKYMHYQQLCWIIALILLVLGY 275
KY+ YQ +A +L V+G+
Sbjct: 191 TKKYLAYQWALLAVASVLAVIGF 213
>gi|356575935|ref|XP_003556091.1| PREDICTED: inactive rhomboid protein 1-like isoform 2 [Glycine max]
Length = 282
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 152/272 (55%), Gaps = 58/272 (21%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSH-QCVLRDILGRYSFQPWKENYL 65
+ W +WL P+ V I +FV TM++NNCP +CV R LGR+SFQP +EN L
Sbjct: 33 SETHWTSWLVPMFVVANIAVFVITMYINNCPRNNLRFQGRCVAR-FLGRFSFQPMQENPL 91
Query: 66 LGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
LGPS STL +G L + +V ++Q +RL + +WLHAG+IHL+ NM SL+ + RLEQ+FG
Sbjct: 92 LGPSSSTLTKMGALRWDNVVNRHQGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
F +I +YL+SGFGGS+LS L ++ +SVGASGALFGLLG MLSELI NWTIY+NK
Sbjct: 152 FIKIGIIYLVSGFGGSVLSSLF---IRDHISVGASGALFGLLGAMLSELITNWTIYSNK- 207
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
+ ++ ++ + A
Sbjct: 208 -------------------------------------------------FSWLEQRRLPA 218
Query: 246 GYDAKHRQPKYMHYQQLCWIIALILLVLGYIT 277
G K KY YQ + WI++LILL+ G T
Sbjct: 219 GVGMK---SKYKAYQYVLWIVSLILLIAGLST 247
>gi|225455418|ref|XP_002279126.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
Length = 278
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 150/269 (55%), Gaps = 56/269 (20%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
+ QW +WL P+ V + +FV M++NNCP + + + LGR+SFQP KEN L
Sbjct: 28 SETQWTSWLVPMFVVANVAVFVVAMYINNCPKENSRVQGKCVAGFLGRFSFQPLKENPLF 87
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS TL LG L+ +V K+Q +RL++ +WLHAGIIHL+VNM SL+L+ RLEQ+FGF
Sbjct: 88 GPSSKTLEKLGALEWKKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGF 147
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
RI +YLLSGFGGS+LS L + +SVGASGALFGLLG MLSELI NW++Y N+
Sbjct: 148 VRIGVIYLLSGFGGSVLSSLFIQNS---ISVGASGALFGLLGAMLSELITNWSMYTNR-- 202
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
+G++ + + A
Sbjct: 203 ------------------------------------------------FGWIEGRNLPAD 214
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVLGY 275
K KY YQ +CW+++L+LL+ G+
Sbjct: 215 VRVK---SKYKAYQYVCWLVSLVLLIAGF 240
>gi|125575434|gb|EAZ16718.1| hypothetical protein OsJ_32194 [Oryza sativa Japonica Group]
Length = 253
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 140/203 (68%), Gaps = 8/203 (3%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L+ +G L + +V ++Q +RL++ +WLHAG++HL+ NM SL+L+ RLEQ+FG+ RI +
Sbjct: 24 LQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGII 83
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIY NK +L L
Sbjct: 84 YLVSGIGGSVLSSLFIRNS---ISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLL 140
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHR 252
VIA+NLA G +P VDN AHIGGF +G LLGFI +RP YG++ ++Y+ K+
Sbjct: 141 IVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFIFLMRPHYGWM-QRYVLPS-SVKYT 195
Query: 253 QPKYMHYQQLCWIIALILLVLGY 275
KY+ YQ + +A +L V+G+
Sbjct: 196 SKKYLAYQWILLAVASVLAVIGF 218
>gi|302141893|emb|CBI19096.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 148/229 (64%), Gaps = 9/229 (3%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
+W+ + V+ I+ F TM VN+C +SH+ +LGR SFQP EN LLGPS ST
Sbjct: 43 SWVISLFVVLHIVAFAATMFVNDC---WQNSHRDCAIKVLGRLSFQPLWENPLLGPSSST 99
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L ++G L + + +Q +RL + +WLHAG IHL++N++S++ V LEQEFG RI +
Sbjct: 100 LDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIINLSSVIFVGIHLEQEFGPLRIGMV 159
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y+LS F GSL++ L + +VG+SGALFGLLG+MLS LI NW +Y +K +LS L
Sbjct: 160 YILSAFFGSLVATLFLQKSP---AVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALL 216
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
V +N A G +P VDN +++GGF SGVLLGF+L P+ ++EK
Sbjct: 217 LVAVINFALGLLP---YVDNFSNLGGFISGVLLGFVLLFSPRLPRMAEK 262
>gi|359492423|ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein AN10929-like [Vitis
vinifera]
Length = 379
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 148/229 (64%), Gaps = 9/229 (3%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
+W+ + V+ I+ F TM VN+C +SH+ +LGR SFQP EN LLGPS ST
Sbjct: 43 SWVISLFVVLHIVAFAATMFVNDC---WQNSHRDCAIKVLGRLSFQPLWENPLLGPSSST 99
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L ++G L + + +Q +RL + +WLHAG IHL++N++S++ V LEQEFG RI +
Sbjct: 100 LDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIINLSSVIFVGIHLEQEFGPLRIGMV 159
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y+LS F GSL++ L + +VG+SGALFGLLG+MLS LI NW +Y +K +LS L
Sbjct: 160 YILSAFFGSLVATLFLQKSP---AVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALL 216
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
V +N A G +P VDN +++GGF SGVLLGF+L P+ ++EK
Sbjct: 217 LVAVINFALGLLP---YVDNFSNLGGFISGVLLGFVLLFSPRLPRMAEK 262
>gi|110289433|gb|ABG66197.1| Rhomboid family protein, expressed [Oryza sativa Japonica Group]
gi|215686404|dbj|BAG87689.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 227
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 138/200 (69%), Gaps = 8/200 (4%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G L + +V ++Q +RL++ +WLHAG++HL+ NM SL+L+ RLEQ+FG+ RI +YL+
Sbjct: 1 MGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLV 60
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIY NK +L L VI
Sbjct: 61 SGIGGSVLSSLFIRNS---ISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLIVI 117
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPK 255
A+NLA G +P VDN AHIGGF +G LLGFI +RP YG++ ++Y+ K+ K
Sbjct: 118 AINLAIGILP---HVDNFAHIGGFLTGFLLGFIFLMRPHYGWM-QRYVLPS-SVKYTSKK 172
Query: 256 YMHYQQLCWIIALILLVLGY 275
Y+ YQ + +A +L V+G+
Sbjct: 173 YLAYQWILLAVASVLAVIGF 192
>gi|297842567|ref|XP_002889165.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335006|gb|EFH65424.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 351
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 155/261 (59%), Gaps = 9/261 (3%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
WL V ++ I++F TM VN+C + +SH +LGR+SFQP EN +LGPS ST
Sbjct: 48 TWLVSVFVLLQIVLFAVTMGVNDC---SRNSHGHCAAKLLGRFSFQPLSENPMLGPSAST 104
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L +GGL N + ++ +R+L+S WLH+G+ HL +N+ SL+ V +EQ+FG RIA +
Sbjct: 105 LEHMGGLSWNTLTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVI 164
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YLLSG GSL + L + I S+ + A FGL+G MLS L NW +Y K ++L ++
Sbjct: 165 YLLSGIMGSLFAVLF---VRNISSISSGAAFFGLIGAMLSALAKNWNLYTGKISALVIIF 221
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHR 252
++ +N+ GF+P +DN A+IGGF SG LLGF+L +PQ + + ++
Sbjct: 222 TIFTVNILIGFLP---FIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDTN 278
Query: 253 QPKYMHYQQLCWIIALILLVL 273
+ + Q ++ +I LV+
Sbjct: 279 RSTRLKDQFDRPVLRIICLVV 299
>gi|222629393|gb|EEE61525.1| hypothetical protein OsJ_15827 [Oryza sativa Japonica Group]
Length = 301
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 140/203 (68%), Gaps = 13/203 (6%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
LR G LD +V NQ +RL +S WLHAG+IHL NM SL+++ RLEQ+FGF ++ +
Sbjct: 77 LRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKVGLV 136
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YL+SGFGGS+LS L + ++VGASGALFGLLG MLSELI NWTIY+N+C ++ L
Sbjct: 137 YLVSGFGGSVLSVLFI--SRNGITVGASGALFGLLGAMLSELITNWTIYSNRCAAMVNLI 194
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHR 252
+ A+NLA G +P VDN AHIGGFA+G LLGF+L ++PQ+G+ SE+ +A
Sbjct: 195 IIAAINLALGILP---RVDNFAHIGGFATGFLLGFVLLIQPQFGW-SEQVSSA------- 243
Query: 253 QPKYMHYQQLCWIIALILLVLGY 275
+ KY +Q + +++ LL+ G+
Sbjct: 244 KSKYNAFQIILLTLSVALLIAGF 266
>gi|168067654|ref|XP_001785725.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662631|gb|EDQ49460.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/262 (45%), Positives = 171/262 (65%), Gaps = 6/262 (2%)
Query: 15 LTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLR 74
T V V II+F+ M+ NNCPAK CVL R SFQPW EN LLGPS +TL
Sbjct: 32 FTLVAVVANIIVFIVVMYENNCPAKIGPGRTCVLGSSFKRMSFQPWSENPLLGPSSATLV 91
Query: 75 DLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYL 134
+GGL L+V + + +RL+S +WLHAG+ HL+VNM +++++ LE+ FGF R+ LYL
Sbjct: 92 KMGGLRTVLVVDQKEGWRLMSCVWLHAGVFHLLVNMIAVLVLGLPLEKTFGFIRVGVLYL 151
Query: 135 LSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
SG GGSLLS L ++ VSVGASGALFGLLG +S++I NW++Y+N C L L +
Sbjct: 152 ASGLGGSLLSSLFNQNG---VSVGASGALFGLLGGTISDVIINWSLYSNYCGVLLNLIIL 208
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQP 254
A+NLA G +P VDN AHIGGF +G+LLG +L ++ Q+GYV + + + +
Sbjct: 209 AAINLAIGLLP---LVDNFAHIGGFLTGLLLGCVLLMKTQHGYVPRRDLLDPNMERPVKN 265
Query: 255 KYMHYQQLCWIIALILLVLGYI 276
++ +Q + +II+ ++L+ G+I
Sbjct: 266 RFNAFQIILFIISALVLIAGFI 287
>gi|302782782|ref|XP_002973164.1| hypothetical protein SELMODRAFT_98870 [Selaginella moellendorffii]
gi|300158917|gb|EFJ25538.1| hypothetical protein SELMODRAFT_98870 [Selaginella moellendorffii]
Length = 286
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 160/249 (64%), Gaps = 12/249 (4%)
Query: 12 RAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIS 71
R + P+ + I++F+ TM+ N+CPA + ++C+L L R+SFQP +N LLGPS +
Sbjct: 4 RVVIVPIFVIANIVVFIITMYRNDCPAHQTE-YRCILPG-LKRFSFQPLSQNPLLGPSSN 61
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
TL +G L+ L+ + +RL+S +WLHAG+ HL++NM L+ + ++EQEFGF ++
Sbjct: 62 TLLRMGALESELVTSGREGWRLVSCIWLHAGVFHLLLNMLGLLTLGLQMEQEFGFLKLGF 121
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
+YL++GFGGSLLS L + +SVGASGALFGL+G +LSEL+ NW+ + +LS L
Sbjct: 122 VYLIAGFGGSLLSALF---LRLTISVGASGALFGLMGALLSELLINWSHHERSWFTLSQL 178
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK- 250
+ +NLA G +P VDN AH+GG SG+LLGFIL RP + ++ ++ ++
Sbjct: 179 VVLFIINLALGKMP---HVDNYAHLGGCISGILLGFILLQRPPLTWPTQPHLPYQPPSRP 235
Query: 251 ---HRQPKY 256
+ PKY
Sbjct: 236 WRIYSLPKY 244
>gi|168024910|ref|XP_001764978.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683787|gb|EDQ70194.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 383
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 161/270 (59%), Gaps = 11/270 (4%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCV-LRDILGRYSFQPWKENYLLGPSIS 71
+WL P + ++ +I F+ M NNC K ++ + V + + + R+ FQP EN LLGPS
Sbjct: 38 SWLIPALALIHLIAFILVMSHNNCDRKGSNGGENVCIFNFVRRFPFQPLSENPLLGPSAI 97
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
+L D G L+ L+ R + +R+L+++ LHAGI HLV N+ L V +LE+EFGF ++
Sbjct: 98 SLLDFGALESELVGRAGEGWRMLTTLSLHAGIFHLVGNLAGLFYVGLQLEREFGFLKVML 157
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
+Y L+GF G+L S L G+ VSVGASGA GL+G L+E++ NW + ++ S+
Sbjct: 158 IYYLAGFAGALASVLFMHGR---VSVGASGATMGLIGARLAEVVMNWNVSKHRTRSIVST 214
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS--EKYIAAGYDA 249
+ L +G +P +DN H+GGF +G LLG +L +RPQ +V+ + + A YD
Sbjct: 215 SFFLVGTLVYGLLP---LMDNFMHLGGFLTGSLLGNVLLIRPQAEWVNYEQCFPAVVYDV 271
Query: 250 KH--RQPKYMHYQQLCWIIALILLVLGYIT 277
+ K+ Q++ WI++L +LV GYI
Sbjct: 272 DDLPARSKHSRGQKVLWIVSLNILVAGYIA 301
>gi|145337690|ref|NP_177909.2| Rhomboid-related intramembrane serine protease family protein
[Arabidopsis thaliana]
gi|332197915|gb|AEE36036.1| Rhomboid-related intramembrane serine protease family protein
[Arabidopsis thaliana]
Length = 351
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
WL V ++ I++F TM VN+C + +SH +LGR+SFQ EN +LGPS ST
Sbjct: 48 TWLVSVFVLLQIVLFAVTMGVNDC---SGNSHGHCSAKLLGRFSFQSLSENPMLGPSAST 104
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L +GGL + ++ +R+L+S WLH+G+ HL +N+ SL+ V +EQ+FG RIA +
Sbjct: 105 LEHMGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVI 164
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y LSG GSL + L + I S+ + A FGL+G MLS L NW +Y +K ++L+++
Sbjct: 165 YFLSGIMGSLFAVLF---VRNIPSISSGAAFFGLIGAMLSALAKNWNLYNSKISALAIIF 221
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
++ +N GF+P +DN A+IGGF SG LLGF+L +PQ
Sbjct: 222 TIFTVNFLIGFLP---FIDNFANIGGFISGFLLGFVLLFKPQ 260
>gi|332148745|dbj|BAK20219.1| Rhomboid family KOMPEITO [Arabidopsis thaliana]
Length = 385
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
WL V ++ I++F TM VN+C + +SH +LGR+SFQ EN +LGPS ST
Sbjct: 48 TWLVSVFVLLQIVLFAVTMGVNDC---SGNSHGHCSAKLLGRFSFQSLSENPMLGPSAST 104
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L +GGL + ++ +R+L+S WLH+G+ HL +N+ SL+ V +EQ+FG RIA +
Sbjct: 105 LEHMGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVI 164
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y LSG GSL + L + I S+ + A FGL+G MLS L NW +Y +K ++L+++
Sbjct: 165 YFLSGIMGSLFAVLF---VRNIPSISSGAAFFGLIGAMLSALAKNWNLYNSKISALAIIF 221
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
++ +N GF+P +DN A+IGGF SG LLGF+L +PQ
Sbjct: 222 TIFTVNFLIGFLP---FIDNFANIGGFISGFLLGFVLLFKPQ 260
>gi|356559855|ref|XP_003548212.1| PREDICTED: inactive rhomboid protein 1-like isoform 2 [Glycine max]
Length = 282
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/271 (40%), Positives = 150/271 (55%), Gaps = 59/271 (21%)
Query: 6 YAPE-QWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTAD-SHQCVLRDILGRYSFQPWKEN 63
Y PE W +WL P+ V +++FV M++N+CP K +CV R LGR+SFQP +EN
Sbjct: 32 YDPEVHWTSWLVPLFVAVNVVVFVVAMYLNDCPRKNLGFEGECVAR-FLGRFSFQPLREN 90
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
L GPS STL +G L + +V +Q +RL++ +WLHAG++HL NM SL+ + RLEQ+
Sbjct: 91 PLFGPSSSTLTKMGALRWDDVVNHHQAWRLVTCIWLHAGVVHLAANMLSLVFIGIRLEQQ 150
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
FGF RI +YLLSGFGGS+LS L + +SVGASGALFGLLG MLSELI NW+IY N
Sbjct: 151 FGFVRIGIIYLLSGFGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELITNWSIYTN 207
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
K +G++ ++
Sbjct: 208 K--------------------------------------------------FGWLEQRRP 217
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
AG K KY YQ + WI++ ILL++G
Sbjct: 218 PAGVRLK---SKYKAYQYVLWIVSAILLIVG 245
>gi|242072091|ref|XP_002451322.1| hypothetical protein SORBIDRAFT_05g027720 [Sorghum bicolor]
gi|241937165|gb|EES10310.1| hypothetical protein SORBIDRAFT_05g027720 [Sorghum bicolor]
Length = 292
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 142/215 (66%), Gaps = 21/215 (9%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G LD +V Q +RL++ MWLHAG++HL++NM L+++ RLEQEFGF RI +YL+
Sbjct: 1 MGALDVPKVVHGRQGWRLITCMWLHAGVVHLLINMLCLVIIGIRLEQEFGFVRIGLVYLI 60
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SGFGGSL+S L + VSVGASGALFGL+G+MLSELI NW++YANK +L L VI
Sbjct: 61 SGFGGSLMSALFIQSN---VSVGASGALFGLIGSMLSELITNWSLYANKVAALVTLVLVI 117
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE-KYIAAGYDAKHR-- 252
+NLA G +P VDN AHIGG SG LLGF+ F+RPQ+ ++++ + ++A +
Sbjct: 118 VVNLALGLLP---RVDNFAHIGGLISGFLLGFVFFIRPQFAWLTQHRRVSAAAQPDGQPP 174
Query: 253 ------------QPKYMHYQQLCWIIALILLVLGY 275
+ K+ YQ + W+ A +LLV+G+
Sbjct: 175 AAAPTPPPVVSVKRKHKTYQYVLWLAAAVLLVVGF 209
>gi|356518507|ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 373
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 145/230 (63%), Gaps = 11/230 (4%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSH-QCVLRDILGRYSFQPWKENYLLGPSIS 71
W+ V ++ I +F+ TM VN+C +SH CVL+ LGR+SFQP EN LLGPS S
Sbjct: 36 TWVVSVFVIIQIGVFIATMLVNDC---WNNSHGDCVLQA-LGRFSFQPLPENPLLGPSQS 91
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
L ++G L R+L+ +Q +RL + +LHAG+ HL++N++S++ V LE FG RI
Sbjct: 92 KLDEMGALRRSLLTEHHQTWRLFTFPFLHAGVFHLLLNLSSVIYVGVSLEHHFGPIRIGI 151
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
+Y LS F GSL++ L + + +VGASGAL+GLLGT+LSEL+ NW ++NK ++++ L
Sbjct: 152 IYALSAFVGSLVASLF---LQNMPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASL 208
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
V N GF+P VDN A IGGF SG LLG + L PQ V+
Sbjct: 209 VFVFVCNFVLGFLP---YVDNFASIGGFISGFLLGSVFLLSPQLQPVAPN 255
>gi|356507686|ref|XP_003522595.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 368
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 144/230 (62%), Gaps = 11/230 (4%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSH-QCVLRDILGRYSFQPWKENYLLGPSIS 71
W+ V ++ I +F+ TM VN+C +SH CVL+ LGR+SFQP EN LLGPS S
Sbjct: 31 TWVVSVFVIIQIGVFIATMLVNDC---WNNSHGDCVLQP-LGRFSFQPLPENPLLGPSQS 86
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
L ++G L NL+ +Q +RL + +LHAG+ HL++N++S++ V LE FG RI
Sbjct: 87 KLDEMGALRWNLLTEHHQTWRLFTFPFLHAGLFHLLLNLSSVIYVGVNLEHHFGPIRIGI 146
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
+Y LS F GSL++ L + I +VGASGAL+GLLGT+LSEL+ NW ++NK ++++ L
Sbjct: 147 IYALSAFVGSLVASLF---LQNIPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASL 203
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
V N GF+P VDN A +GGF SG LLG + L PQ V+
Sbjct: 204 VFVFVCNFVLGFLP---YVDNFASMGGFISGFLLGSVFLLCPQIQPVAPN 250
>gi|225426830|ref|XP_002283280.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
Length = 281
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLL 66
+ W +WL P+ V + +FV M+VN+CP K + L R SFQP +EN L
Sbjct: 34 SETHWTSWLIPMFVVANVAVFVVVMYVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLF 93
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GPS STL LGGL+ N +V +Q +RL++ +WLHAG+IHL+ NM SL+ + RLEQ+FGF
Sbjct: 94 GPSSSTLEKLGGLEWNKVVYGDQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 153
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
RI +YL+SGFGGS+LS L + +SVGASGALFGLLG MLSELI NW+IY NK
Sbjct: 154 VRIGIIYLVSGFGGSILSSLF---IQHNISVGASGALFGLLGAMLSELITNWSIYTNK 208
>gi|449522305|ref|XP_004168167.1| PREDICTED: inactive rhomboid protein 1-like, partial [Cucumis
sativus]
Length = 380
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 140/237 (59%), Gaps = 11/237 (4%)
Query: 24 IIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNL 83
I+ F+ M VN+C ++SHQ +LGR SFQP EN LLGPS STL +GGL R
Sbjct: 73 IVAFIAMMLVNDC---WSNSHQDCAFGVLGRMSFQPLAENPLLGPSASTLEKMGGLQRKS 129
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+ Q +RL + +HAG+IHLV+N+ S++ V +LE E+G R +YLLS + G+L+
Sbjct: 130 LTEYRQIWRLFTFPCMHAGLIHLVINLGSVIFVGIQLELEYGPVRTGIIYLLSAYTGTLV 189
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
+ L + SVG+SGALFGLLG M+S +I NW +Y ++ +L + +V A+N G
Sbjct: 190 AALFAQNSP---SVGSSGALFGLLGAMISGIIRNWKLYTDRFLALGSVLAVFAINFGLGL 246
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQ 260
+P +DN A++GG +GVLLGFI+ Q EK GY + Y + +
Sbjct: 247 LP---YIDNFANVGGLVAGVLLGFIILFTLQDR--QEKAQTKGYSLSYGFKNYFNLE 298
>gi|54290319|dbj|BAD61123.1| putative membrane protein [Oryza sativa Japonica Group]
gi|54290396|dbj|BAD61266.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 130/197 (65%), Gaps = 19/197 (9%)
Query: 2 ENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPA--------------KTADSHQCV 47
E +P+ +W +L P VV + +FV TM++N+CPA + A S C
Sbjct: 62 EFRPF--RRWFPFLVPFFVVVNVALFVVTMYINDCPAHMQATGDAIGGDVGEGAASQGCW 119
Query: 48 LRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLV 107
L LGR++FQ +KEN L+GPS +TL +G L+ + + ++ +RL++ +WLHAG++H++
Sbjct: 120 LEPELGRFAFQSYKENPLIGPSSATLLKMGALETSKVTNDHEGWRLITCIWLHAGVVHIL 179
Query: 108 VNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLL 167
NM SL+L+ RLE+EFGF RI LY++SG GGSLLS L +SVGASGALFGLL
Sbjct: 180 ANMLSLLLIGIRLEKEFGFMRIGTLYVISGVGGSLLSALFMVSN---ISVGASGALFGLL 236
Query: 168 GTMLSELIANWTIYANK 184
G+MLSELI NWTIY NK
Sbjct: 237 GSMLSELITNWTIYENK 253
>gi|449466454|ref|XP_004150941.1| PREDICTED: inactive rhomboid protein 1-like, partial [Cucumis
sativus]
Length = 374
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 144/246 (58%), Gaps = 11/246 (4%)
Query: 15 LTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLR 74
+ V ++ I+ F+ M VN+C ++SHQ +LGR SFQP EN LLGPS STL
Sbjct: 37 VVSVFVLLHIVAFIAMMLVNDC---WSNSHQDCAFGVLGRMSFQPLAENPLLGPSASTLE 93
Query: 75 DLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYL 134
+GGL R + Q +RL + +HAG+IHLV+N+ S++ V +LE E+G R +YL
Sbjct: 94 KMGGLQRKSLTEYRQIWRLFTFPCMHAGLIHLVINLGSVIFVGIQLELEYGPVRTGIIYL 153
Query: 135 LSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
LS + G+L++ L + SVG+SGALFGLLG M+S +I NW +Y ++ +L + +V
Sbjct: 154 LSAYTGTLVAALFAQNSP---SVGSSGALFGLLGAMISGIIRNWKLYTDRFLALGSVLAV 210
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQP 254
A+N G +P +DN A++GG +GVLLGFI+ Q EK GY +
Sbjct: 211 FAINFGLGLLP---YIDNFANVGGLVAGVLLGFIILFTLQDR--QEKAQTKGYSLSYGFK 265
Query: 255 KYMHYQ 260
Y + +
Sbjct: 266 NYFNLE 271
>gi|356547428|ref|XP_003542114.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Glycine max]
Length = 258
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 135/216 (62%), Gaps = 30/216 (13%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
LR LG L++NL+ +N+ +R S M+LHAG++HL+ NM L+ + RLE+EFGF +I L
Sbjct: 14 LRPLGALEKNLVEDQNEGWRFFSCMFLHAGVVHLLANMFGLLFIGIRLEKEFGFLKIGFL 73
Query: 133 YLLSGFGGSLLSCLH-HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT----- 186
+LS FGGSLLS LH + VSV AS ALFGLLG MLSEL+ NW+IYANKC
Sbjct: 74 CMLSDFGGSLLSFLHLQESGVSTVSVDASSALFGLLGAMLSELLTNWSIYANKCLFVKRQ 133
Query: 187 -------SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
S+ +L ++ LNLA GF+P VDN AHIGG +G LGFIL +RPQY YV+
Sbjct: 134 ILTHAYFSVLLLLIIVGLNLAVGFLP---RVDNSAHIGGLLAGYFLGFILLMRPQYXYVN 190
Query: 240 EKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
KY YQ I+++I+L+LGY
Sbjct: 191 X--------------KYKWYQYFFLIMSVIILLLGY 212
>gi|147766525|emb|CAN76609.1| hypothetical protein VITISV_039487 [Vitis vinifera]
Length = 448
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 136/229 (59%), Gaps = 26/229 (11%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
+W+ + V+ I+ F TM VN+C +SH+ +LGR SFQP EN LLGPS ST
Sbjct: 43 SWVISLFVVLHIVAFAATMFVNDC---WQNSHRDCAIKVLGRLSFQPLWENPLLGPSSST 99
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L ++G L + + +Q +RL + +WLHAG IHL++N++S++ V LEQEFG P
Sbjct: 100 LDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIINLSSVIFVGIHLEQEFG----PPX 155
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
L ++ +VG+SGALFGLLG+MLS LI NW +Y +K +LS L
Sbjct: 156 LFL----------------QKSPAVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALL 199
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
V +N A G +P VDN +++GGF SGVLLGF+L P+ + EK
Sbjct: 200 LVAVINFALGLLP---YVDNFSNLGGFISGVLLGFVLLFSPRLPRMXEK 245
>gi|186520951|ref|NP_001119182.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
gi|332003745|gb|AED91128.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
Length = 299
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 122/180 (67%), Gaps = 9/180 (5%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQ----CVLRDILGRYSFQPWKENY 64
+W +WL P+ V + +FV M VNNCP +SH+ CV + LGR SF+P + N
Sbjct: 51 SRWTSWLVPMFVVANVAVFVVAMFVNNCP-NHFESHRLRGHCVAK-FLGRLSFEPLRTNP 108
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
L GPS TL LG L+ + +V K + +RLL+ +WLHAG+IHL NM SL+ + RLEQ+F
Sbjct: 109 LFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQF 168
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
GF RI +YLLSG GGS+LS L + +SVGASGALFGLLG+MLSEL NWTIY+NK
Sbjct: 169 GFVRIGVIYLLSGIGGSVLSSLFIRNS---ISVGASGALFGLLGSMLSELFTNWTIYSNK 225
>gi|167999275|ref|XP_001752343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696738|gb|EDQ83076.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 132/222 (59%), Gaps = 9/222 (4%)
Query: 14 WLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTL 73
W++ + ++ + TMH N+CP+ T + L +++ QP+ EN LLGPS TL
Sbjct: 5 WISMAFTIAHTVILIVTMHQNDCPSHTQTA---CLNPSFHKFAMQPFDENPLLGPSAKTL 61
Query: 74 RDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLY 133
LG L+ +LI + + +RLLS+MWLHAG++H+ + ++L+ LE++ GF ++ +Y
Sbjct: 62 LSLGALESDLITKSREGWRLLSAMWLHAGVLHIAGTASGMLLLGIPLERQLGFVKVGVVY 121
Query: 134 LLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS 193
+LSGF GS++S L G+ VSVGASGA GLLG LS +I NW Y ++ +L +
Sbjct: 122 ILSGFLGSVISALMVHGR---VSVGASGAFMGLLGATLSSIIVNWKSYRHRSRALMGVMF 178
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
ALN FG +P DN HIGG G L+G + F++ +
Sbjct: 179 FTALNAVFGLMP---LADNFMHIGGAVMGFLIGNLFFIKQNF 217
>gi|168040858|ref|XP_001772910.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675821|gb|EDQ62312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 145/245 (59%), Gaps = 9/245 (3%)
Query: 2 ENKPYAPEQWRAW--LTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQP 59
+ +P+ P++ R + PVI + I++F+ M+ NNCP +CV + SFQP
Sbjct: 48 KPQPFNPKKHRYFPIAVPVIMIGNIVVFIMMMYYNNCPDHIQPGRKCV-GAWMKPMSFQP 106
Query: 60 WKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYR 119
W EN +LGP + + GGL +L+ K Q +RL+SS+ L+ G+ L+ N+T+L+ V R
Sbjct: 107 WDENPMLGPRAAAILKWGGLLSSLVTDKGQGWRLVSSIALNGGVFQLIANLTALLGVGLR 166
Query: 120 LEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWT 179
+E F F R+A +Y SGFGG++LS L + + V V AS A+ GL+G L++++ NW
Sbjct: 167 IETYFWFTRVAIIYATSGFGGNVLSTLFIQDQ---VFVSASAAVMGLIGASLADVLTNWD 223
Query: 180 IYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
+ K L+ L ++L FG +P VDN A+ GGF +G LGF+L +RPQ G+
Sbjct: 224 MTEWKLLKLTDLLLFSLISLGFGLMP---QVDNFANAGGFFTGFCLGFVLLMRPQRGFKD 280
Query: 240 EKYIA 244
++++
Sbjct: 281 TRHLS 285
>gi|168001759|ref|XP_001753582.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695461|gb|EDQ81805.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 362
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 142/245 (57%), Gaps = 9/245 (3%)
Query: 2 ENKPYAPEQWRAW--LTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQP 59
+ +P+ P + R + PVI V I++F+ M N+CP A +CV + L SFQP
Sbjct: 48 KPQPFIPRKHRYFPIAVPVIMVGSIVVFIMMMLYNDCPKHIAPGEKCV-GEWLKPLSFQP 106
Query: 60 WKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYR 119
W EN +LGP + GG++ +L+ +K + +RLLSS+ ++ G++ L++N+ +L++V R
Sbjct: 107 WDENPMLGPRWRAIMKWGGVESSLVTKKKEGWRLLSSIAVNGGVLQLIMNLIALLIVGLR 166
Query: 120 LEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWT 179
+E F F ++ +Y +SGFGG++LS L + + + V AS AL GL+G +++ NW
Sbjct: 167 MELYFWFFKVGIIYTMSGFGGNVLSTLFIQNQ---LFVSASAALLGLIGASFADIFINWD 223
Query: 180 IYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
+ K L ++ FG +P VDN A++GG +G LGF+ LRPQ GY
Sbjct: 224 VVERKALKFVDLIVFGLISFGFGLMP---QVDNFANVGGLFTGFCLGFVFLLRPQRGYKD 280
Query: 240 EKYIA 244
++++
Sbjct: 281 TRHLS 285
>gi|255545576|ref|XP_002513848.1| KOM, putative [Ricinus communis]
gi|223546934|gb|EEF48431.1| KOM, putative [Ricinus communis]
Length = 389
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 137/239 (57%), Gaps = 12/239 (5%)
Query: 5 PYAPEQWR--AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKE 62
P+ + R WL + ++ + F+ TM VN+C T C ++ LGR SFQP E
Sbjct: 44 PFFKSRRRRDTWLISIFVIIHLGAFIATMIVNDC--STNSYGDCAIK-TLGRLSFQPLSE 100
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
N LLGPS STL +G L R L++ ++Q +RL S WLHAG+IHL++++ ++ + LEQ
Sbjct: 101 NPLLGPSASTLDKMGALRRTLVI-EHQTWRLFSCPWLHAGLIHLIIDLIGVIFLGIYLEQ 159
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
EFG R+ +Y+LS F GSL++ L + V +SGA GLLG S L+ NW +
Sbjct: 160 EFGPLRVGIIYILSAFFGSLVTALFVRDSP---VVSSSGAQLGLLGATFSALVRNWKSHT 216
Query: 183 NKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
NK ++ + V A N+ G +P DN ++IGG SG LLGF+L PQ ++ K
Sbjct: 217 NKVAAVLIHFFVFACNVMLGLLP---YADNYSNIGGLISGFLLGFVLLYTPQLRKLAPK 272
>gi|255586755|ref|XP_002533997.1| KOM, putative [Ricinus communis]
gi|223526008|gb|EEF28386.1| KOM, putative [Ricinus communis]
Length = 229
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 104/145 (71%), Gaps = 6/145 (4%)
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
+I LY++SGFGGSL+S L + +SVGASGALFGLLG MLSELI NWTIY NK +
Sbjct: 7 KIGLLYVISGFGGSLMSSLFIQTN---ISVGASGALFGLLGAMLSELITNWTIYTNKVAA 63
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGY 247
L +IA+NLA G +P VD N AHIGGF SG LLGF+ +RPQ+G+VS++Y+ GY
Sbjct: 64 FVTLLIIIAINLAVGILPHVD---NFAHIGGFLSGFLLGFVFLIRPQFGWVSQRYVPPGY 120
Query: 248 DAKHRQPKYMHYQQLCWIIALILLV 272
+PK+ YQ++ WII+LI++V
Sbjct: 121 SPASVKPKFKAYQRILWIISLIVVV 145
>gi|357461731|ref|XP_003601147.1| Rhomboid family member [Medicago truncatula]
gi|355490195|gb|AES71398.1| Rhomboid family member [Medicago truncatula]
Length = 332
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 137/226 (60%), Gaps = 10/226 (4%)
Query: 26 MFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIV 85
F+ TM VN+C +SH LGR+SFQP EN LLGPS+S L ++G L +N +
Sbjct: 8 FFIATMLVNDC---FTNSHGDCTFPSLGRFSFQPLAENPLLGPSMSKLDEMGALQKNFLT 64
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
++Q +RL + +LHAG+ HLV+N+ S++ V RLEQEFG RI +Y+LS F G+L++
Sbjct: 65 ERHQTWRLFTFPFLHAGLFHLVINLCSVIYVGIRLEQEFGPLRIGIVYILSAFVGALMAS 124
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
L + I VG+SGALFGLLG +LSEL+ NW + K + ++ + N GF+P
Sbjct: 125 LF---LQNIPVVGSSGALFGLLGALLSELVWNWKYHTKKISEVASFVFIFVCNFLLGFLP 181
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS-EKYIAAGYDAK 250
VDN + IGGF SG LLG +L PQ+ V+ K YD K
Sbjct: 182 ---YVDNFSSIGGFISGFLLGTVLLFAPQFQQVTPSKGDQIDYDLK 224
>gi|125524408|gb|EAY72522.1| hypothetical protein OsI_00383 [Oryza sativa Indica Group]
Length = 265
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 110/162 (67%), Gaps = 6/162 (3%)
Query: 110 MTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGT 169
M SL+L+ RLE+EFGF RI LY++SG GGSLLS L +SVGASGALFGLLG+
Sbjct: 1 MLSLLLIGIRLEKEFGFMRIGTLYVISGVGGSLLSALFMVSN---ISVGASGALFGLLGS 57
Query: 170 MLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
MLSELI NWTIY NK +L L +I +NLA G +P VDN AH+GGF SG LGF+L
Sbjct: 58 MLSELITNWTIYENKFAALLTLVIIILINLAVGILP---HVDNFAHLGGFTSGFFLGFVL 114
Query: 230 FLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILL 271
+RPQ+GY+++K G + KY YQ + W+IA +++
Sbjct: 115 LVRPQFGYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLII 156
>gi|413920155|gb|AFW60087.1| hypothetical protein ZEAMMB73_684125, partial [Zea mays]
Length = 191
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 98/146 (67%), Gaps = 4/146 (2%)
Query: 1 MENKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPW 60
+ +PY +W WL V C+ +F+ TM+VN+CP ++ C LGR++FQP
Sbjct: 45 IRARPYY-RRWSPWLVSGATVACVAIFLVTMYVNDCPTHNSN---CAAAGFLGRFAFQPL 100
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
+EN LLGPS +TL +G LD +V Q +RL++ MWLHAG++HL++NM L++V RL
Sbjct: 101 RENPLLGPSSATLVKMGALDVAKVVHGRQGWRLITCMWLHAGVVHLLINMLCLLVVGIRL 160
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCL 146
EQEFGF RI +YL+SGFGGSL+S L
Sbjct: 161 EQEFGFVRIGLVYLISGFGGSLMSAL 186
>gi|293334937|ref|NP_001169173.1| hypothetical protein [Zea mays]
gi|223975303|gb|ACN31839.1| unknown [Zea mays]
gi|414864371|tpg|DAA42928.1| TPA: hypothetical protein ZEAMMB73_077306 [Zea mays]
gi|414864372|tpg|DAA42929.1| TPA: hypothetical protein ZEAMMB73_077306 [Zea mays]
Length = 148
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 86/120 (71%), Gaps = 3/120 (2%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL PVIFV I +FV TM+ NNCPA+ D+++CV R LGR+SFQP ++N L GP
Sbjct: 32 REWVPWLVPVIFVASITVFVVTMYANNCPAR--DTNKCVAR-FLGRFSFQPLRQNPLFGP 88
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S +TL +G L +V ++Q +RLLSSMWLHAG+IHLV NM L+ + RLEQ+FG+ R
Sbjct: 89 SSATLTKMGALVWEKVVHRHQGWRLLSSMWLHAGVIHLVANMLCLLFIGMRLEQQFGYGR 148
>gi|212275536|ref|NP_001130569.1| uncharacterized protein LOC100191668 [Zea mays]
gi|194689512|gb|ACF78840.1| unknown [Zea mays]
gi|414591380|tpg|DAA41951.1| TPA: hypothetical protein ZEAMMB73_621528 [Zea mays]
Length = 173
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 82/126 (65%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
+W WL P + V CI +FV M+ NNCP + + L R+SFQP +EN LLGP
Sbjct: 35 RKWWPWLVPTVIVACIAVFVVEMYENNCPKNRSQLGGDCVAGFLRRFSFQPLRENPLLGP 94
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S STL +G LD N IV +NQ +RL+S +WLHAG+IHLVVNM SL+ + RLEQ+FGF +
Sbjct: 95 SSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFGK 154
Query: 129 IAPLYL 134
+ Y
Sbjct: 155 LLKKYF 160
>gi|414867426|tpg|DAA45983.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 184
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 100/148 (67%), Gaps = 8/148 (5%)
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R+ +YL+SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIYANK +
Sbjct: 10 RVGIIYLVSGVGGSVLSSLFIRNN---ISVGASGALFGLLGAMLSELFTNWTIYANKAAA 66
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGY 247
L L VIA+NLA G +P VDN AHIGGF +G LLGF+L +RP YG++ ++Y A
Sbjct: 67 LVTLLVVIAINLAIGILP---HVDNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRY-ALPS 121
Query: 248 DAKHRQPKYMHYQQLCWIIALILLVLGY 275
D K+ KY+ YQ +A +L V+G+
Sbjct: 122 DVKYTTKKYLAYQWALLAVASVLAVIGF 149
>gi|6573780|gb|AAF17700.1|AC009243_27 F28K19.7 [Arabidopsis thaliana]
Length = 735
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 130/245 (53%), Gaps = 41/245 (16%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRD--ILGRYSFQPWKENYLLGPSI 70
WL V ++ I++F TM VN+C + +SH + + ++ S + +N
Sbjct: 48 TWLVSVFVLLQIVLFAVTMGVNDC---SGNSHVSKIDEFQLIHSVSISDYSDNR------ 98
Query: 71 STLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIA 130
+ +GGL + ++ +R+L+S WLH+G+ HL +N+ SL+ V +EQ+FG RIA
Sbjct: 99 ---QHMGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIA 155
Query: 131 PLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC----- 185
+Y LSG GSL + L + I S+ + A FGL+G MLS L NW +Y +K
Sbjct: 156 VIYFLSGIMGSLFAVLF---VRNIPSISSGAAFFGLIGAMLSALAKNWNLYNSKVKDFLW 212
Query: 186 ----------------TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
++L+++ ++ +N GF+P +DN A+IGGF SG LLGF+L
Sbjct: 213 FCFVSCYLLLIAFLIISALAIIFTIFTVNFLIGFLP---FIDNFANIGGFISGFLLGFVL 269
Query: 230 FLRPQ 234
+PQ
Sbjct: 270 LFKPQ 274
>gi|224066895|ref|XP_002302267.1| predicted protein [Populus trichocarpa]
gi|222843993|gb|EEE81540.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 126/257 (49%), Gaps = 38/257 (14%)
Query: 16 TPVIFVVCII---MFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
T VIF II +F+ TM VN+C +SH LGR SFQP EN LGPS S
Sbjct: 53 TCVIFAFVIIHLVVFLITMAVNDC---GYNSHGDCAFKALGRMSFQPLLENPFLGPSASA 109
Query: 73 ------LR--------------------DLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHL 106
LR D G R ++ ++Q +RL LHAG+ H
Sbjct: 110 PIFSPCLRMSRPVYWKPNAVVDKTEESLDKMGAIRKTLLAEHQTWRLFMCPLLHAGVFHF 169
Query: 107 VVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGL 166
++N+ ++ + LE+EFG R +Y+LS F G+L++ + + + S SGALFGL
Sbjct: 170 MINLLCIIFLGIYLEKEFGSIRTGIIYMLSAFSGTLVTAIFVRDSPAVCS---SGALFGL 226
Query: 167 LGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
LG +S L NW Y NK +L L V NL G +P +DN + IG SG LLG
Sbjct: 227 LGATVSALTRNWKFYTNKVAALLTLFFVAGFNLMLGLLP---YMDNYSSIGSMISGFLLG 283
Query: 227 FILFLRPQYGYVSEKYI 243
+LF P+ V++ I
Sbjct: 284 LVLFYTPKLRQVAQNKI 300
>gi|440793889|gb|ELR15060.1| peptidase, S54 family protein [Acanthamoeba castellanii str. Neff]
Length = 434
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 9/187 (4%)
Query: 45 QCVLRD--ILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAG 102
QCVL I F+P N GP TL LG D IV + +R + ++LHAG
Sbjct: 189 QCVLMGVAIWKNGGFEPISVNPFFGPDAETLIALGAKDVPKIVEDYEVWRFFTPIFLHAG 248
Query: 103 IIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGA 162
+IHL +N+ L + LE++ GF R+ +Y++SGFGG+L S L ++SVGASGA
Sbjct: 249 LIHLALNLI-FQLQCFMLERQMGFVRVGLVYIVSGFGGNLASSLF---LPRLISVGASGA 304
Query: 163 LFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASG 222
LFGL+G + + NW++ + C +L VL ++A++L G +P VDN AH+GG +G
Sbjct: 305 LFGLVGMIFVVIFRNWSLVVSPCRNLVVLCIMVAISLFLGLLP---NVDNFAHVGGLVTG 361
Query: 223 VLLGFIL 229
++ I+
Sbjct: 362 LVASLIV 368
>gi|110289434|gb|ABB47903.2| Rhomboid family protein, expressed [Oryza sativa Japonica Group]
Length = 250
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G L + +V ++Q +RL++ +WLHAG++HL+ NM SL+L+ RLEQ+FG+ RI +YL+
Sbjct: 1 MGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLV 60
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
SG GGS+LS L + +SVGASGALFGLLG MLSEL NWTIY NK T
Sbjct: 61 SGIGGSVLSSLFIRNS---ISVGASGALFGLLGAMLSELFTNWTIYTNKVT 108
>gi|357142169|ref|XP_003572481.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Brachypodium distachyon]
Length = 239
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 115/204 (56%), Gaps = 20/204 (9%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF-- 126
S L +G LD + ++Q + L+S +WLHAG+I L VNM L+ + LEQ FGF
Sbjct: 17 DFSCLEKMGALDWAKVFHQHQGWHLISCIWLHAGLIRLFVNMLXLLFIGIHLEQXFGFVV 76
Query: 127 --ARI-APLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
AR +YLLSGFGGS+ S L + + VGASGAL L +MLS+LI WT+Y+N
Sbjct: 77 SLARSHGIIYLLSGFGGSVQSVLL---QNHYIFVGASGAL--XLCSMLSDLIVKWTVYSN 131
Query: 184 KCTSLSVLGS---VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
K +S V+ + ++ +NLA +P D A IGGF + +GF+L RP++G++
Sbjct: 132 KVSSCPVIITLLFIVLINLAIXIVP---HADXFACIGGFVARFFVGFVLLARPKFGWMKR 188
Query: 241 KYIAAGYDAKHRQPKYMHYQQLCW 264
+ ++ PKY Q + W
Sbjct: 189 HELP----QTNQPPKYKTXQYVLW 208
>gi|299471469|emb|CBN79420.1| Protein secE/sec61-gamma protein; Rhomboid-like protein [Ectocarpus
siliculosus]
Length = 766
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 121/218 (55%), Gaps = 25/218 (11%)
Query: 15 LTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLR 74
TP++F++C+I+ + +N A++ + EN GPS+ TL
Sbjct: 419 FTPLMFLICLILLFWEFGLNGWEAESLE-------------------ENPSYGPSVETLI 459
Query: 75 DLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYL 134
+ G +LIV +RL+S M+LHAG++H + NM + V +E+ FG+ R+A +YL
Sbjct: 460 EAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVASIYL 519
Query: 135 LSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
+SG G+++S + + V VGASGA+FG+ G + ++L NW++ ++C +VL +
Sbjct: 520 VSGVFGTIVSAIFVPTQ---VMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFIL 576
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
A+N+ G +P +DN AH GG G+ +G L ++
Sbjct: 577 TAVNIILGLMP---FLDNFAHCGGMLMGLFMGLGLLVQ 611
>gi|413919341|gb|AFW59273.1| hypothetical protein ZEAMMB73_333041 [Zea mays]
Length = 273
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
+WL P++ + ++MFV M NNCP D CV R L R+SFQP KEN LLGP+ +T
Sbjct: 58 SWLVPLVVIANVLMFVLVMFYNNCPRSGGD---CVGRGFLRRFSFQPLKENPLLGPTAAT 114
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
L+ G LD +V NQ +RL S WLHAG+IHL+ NM SL+ + RLEQ+FGF +
Sbjct: 115 LQRYGALDWYKVVHGNQAWRLESCTWLHAGLIHLLANMISLIFIGVRLEQQFGFCK 170
>gi|268637931|ref|XP_002649151.1| rhomboid family protein [Dictyostelium discoideum AX4]
gi|256012943|gb|EEU04099.1| rhomboid family protein [Dictyostelium discoideum AX4]
Length = 489
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 28/223 (12%)
Query: 8 PEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLG 67
P+Q+ + I ++ ++MF++ + N F+PWK N G
Sbjct: 232 PKQFVPYFIIAISLIDLVMFIWEIIYNG--------------------GFEPWKTNPWFG 271
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ TL D+G LI+ + +R + ++LH GI H ++NM + + V +LE+ +G
Sbjct: 272 PNSYTLLDVGAKYSPLIL-NGEWWRFFTPIFLHVGIFHYLMNMVTQLRVGMQLERAYGGH 330
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
RI P+YLL G G+L S + V VGASGA+FG LG +L++LI NW++ A +
Sbjct: 331 RIVPIYLLCGVAGNLCSAIMLPNS---VQVGASGAIFGFLGVLLTDLIRNWSVLAKPWLN 387
Query: 188 LSVLGSVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFIL 229
L I + A G F+P GVDN AH+GGF +G+L I
Sbjct: 388 FGSLLFSIITSFAVGLFLP---GVDNFAHLGGFIAGILTAAIF 427
>gi|215768970|dbj|BAH01199.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 84/121 (69%), Gaps = 3/121 (2%)
Query: 155 VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLA 214
+SVGASGALFGLLG+MLSELI NWTIY NK +L L +I +NLA G +P VDN A
Sbjct: 5 ISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVIIILINLAVGILP---HVDNFA 61
Query: 215 HIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
H+GGF SG LGF+L +RPQ+GY+++K G + KY YQ + W+IA ++L+ G
Sbjct: 62 HLGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLILISG 121
Query: 275 Y 275
+
Sbjct: 122 F 122
>gi|297719639|ref|NP_001172181.1| Os01g0147300 [Oryza sativa Japonica Group]
gi|255672873|dbj|BAH90911.1| Os01g0147300 [Oryza sativa Japonica Group]
Length = 121
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
Query: 155 VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLA 214
+SVGASGALFGLLG+MLSELI NWTIY NK +L L +I +NLA G +P VDN A
Sbjct: 5 ISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVIIILINLAVGILP---HVDNFA 61
Query: 215 HIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
H+GGF SG LGF+L +RPQ+GY+++K G + KY YQ + W+IA ++L+ G
Sbjct: 62 HLGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLILISG 121
>gi|328866134|gb|EGG14520.1| beta-lactamase family protein [Dictyostelium fasciculatum]
Length = 490
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
F+PWK N GPS STL ++G LI+ + +R S ++LH GI HL++N+ + + +
Sbjct: 259 FEPWKTNPWFGPSASTLLNVGAKYAPLILY-GEWWRFFSPIFLHVGIFHLLMNLGTQLRI 317
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
+LE+ +G RI P+YLL G G+L S + V VGASG++FG LG +L++L
Sbjct: 318 GMQLERSYGAHRIVPIYLLCGVMGNLCSSIF---LPLSVQVGASGSIFGFLGVLLADLAR 374
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFIL 229
NW+ A+ + L I + A G F+P GVDN AH GGF G+L G I
Sbjct: 375 NWSALASPYLNCCSLVFTIITSFAVGLFLP---GVDNFAHFGGFVMGILTGLIF 425
>gi|440797932|gb|ELR19006.1| peptidase, S54 family protein [Acanthamoeba castellanii str. Neff]
Length = 459
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 21/172 (12%)
Query: 58 QPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVS 117
+ +++N GP+ TL+ LG I+ KN+ +R ++M+LH GI+HL++N ++ V
Sbjct: 239 EDFQDNPFFGPTSETLKTLGAKWTLAILEKNEAWRFFTAMFLHVGIVHLLIN---ILRVG 295
Query: 118 YRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIAN 177
+ LE++ GF RI P+Y+LSGF G+L SC+ ++VGASGA FGL G ++++LI N
Sbjct: 296 WTLERQIGFWRIGPIYILSGFAGNLASCIF---LPNTITVGASGAAFGLAGVLVADLILN 352
Query: 178 WTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
W I L + G+DN AHIGG G L G +L
Sbjct: 353 WGIVGLALALAVGL---------------LPGLDNFAHIGGLVQGFLAGLVL 389
>gi|281203068|gb|EFA77269.1| mitochondrial substrate carrier family protein [Polysphondylium
pallidum PN500]
Length = 800
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 46 CVLR-DILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGII 104
C+L +I+ F+PWK N GPS + L + G + + +R S ++LH GI
Sbjct: 559 CILIWEIILNRGFEPWKTNPWFGPSATVLLNAGA-KYTPAMLAGEWWRFFSPIFLHVGIF 617
Query: 105 HLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALF 164
HL++N+ + + V +LE+ +G RI P+YLL G G+L S + + V GASGA+F
Sbjct: 618 HLLMNLMTQVRVGMQLERAYGAHRIVPIYLLCGVMGNLCSAIFL---PQSVQAGASGAIF 674
Query: 165 GLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG-FIPGVDGVDNLAHIGGFASGV 223
G LG ++++L NW++ A+ + L I ++ A G F+P GVDN AH GGF G+
Sbjct: 675 GFLGVLVTDLFRNWSLLASPFMNCCSLMFTIIISFAVGLFLP---GVDNFAHFGGFVMGI 731
Query: 224 LLGFIL 229
+ I
Sbjct: 732 MSSLIF 737
>gi|223998534|ref|XP_002288940.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976048|gb|EED94376.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 239
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 99/175 (56%), Gaps = 7/175 (4%)
Query: 52 LGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMT 111
L + +P N ++GPS TL +G +LIV + + YRL S M LHAG+IH +NM
Sbjct: 1 LNGWKVEPLSVNPMIGPSAETLIKMGAKQTSLIVNQGEWYRLFSPMVLHAGLIHYFLNMM 60
Query: 112 SLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML 171
+L + +EQ GFA A ++++ GG+++S + E +SVGASG +FGL+G +
Sbjct: 61 ALWFIGKAVEQCHGFAAAAIIFVIPAVGGTIMSAIF---LPEYISVGASGGIFGLIGACI 117
Query: 172 SELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
+++ NW++ +K L +L ++ +N G P VDN H+GG G L G
Sbjct: 118 ADICINWSLLFSKHVLLWLLFDIV-INCLVGLTP---FVDNFTHLGGMVYGFLCG 168
>gi|390343899|ref|XP_003725988.1| PREDICTED: inactive rhomboid protein 1-like isoform 1
[Strongylocentrotus purpuratus]
Length = 888
Score = 107 bits (266), Expect = 8e-21, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 19/189 (10%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI H V++ M + LE+ G+ RIA +Y+ SG GG+L S +
Sbjct: 675 DQIYRLWLSLFLHAGIFHCVLSFIMHMTILRDLEKLAGWFRIAIIYIFSGIGGNLTSAIL 734
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +GA FGLL ++ E+ NW I N C +L L ++I + A G +P
Sbjct: 735 IPYRAE---VGPAGAQFGLLACLVVEVFQNWQILRNPCKALLKLLAIIMVLFALGLLP-- 789
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AH+GGF G+ L FI YI G ++R+ M +C ++
Sbjct: 790 -WIDNFAHLGGFICGIFLSFIFL----------PYICFGEFDRNRKRIQM---VVCIVLL 835
Query: 268 LILLVLGYI 276
+ LG++
Sbjct: 836 VGFFTLGFV 844
>gi|390343897|ref|XP_783490.3| PREDICTED: inactive rhomboid protein 1-like isoform 2
[Strongylocentrotus purpuratus]
Length = 887
Score = 107 bits (266), Expect = 8e-21, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 19/189 (10%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI H V++ M + LE+ G+ RIA +Y+ SG GG+L S +
Sbjct: 674 DQIYRLWLSLFLHAGIFHCVLSFIMHMTILRDLEKLAGWFRIAIIYIFSGIGGNLTSAIL 733
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +GA FGLL ++ E+ NW I N C +L L ++I + A G +P
Sbjct: 734 IPYRAE---VGPAGAQFGLLACLVVEVFQNWQILRNPCKALLKLLAIIMVLFALGLLP-- 788
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AH+GGF G+ L FI YI G ++R+ M +C ++
Sbjct: 789 -WIDNFAHLGGFICGIFLSFIFL----------PYICFGEFDRNRKRIQM---VVCIVLL 834
Query: 268 LILLVLGYI 276
+ LG++
Sbjct: 835 VGFFTLGFV 843
>gi|84468346|dbj|BAE71256.1| hypothetical protein [Trifolium pratense]
Length = 184
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Query: 170 MLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
MLSELI NW++Y NK +L L +I +NLA G +P VD N AHIGGF +G LLGF+
Sbjct: 1 MLSELITNWSMYDNKIAALLTLVIIIGVNLAIGILPHVD---NFAHIGGFLTGFLLGFVF 57
Query: 230 FLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
+RPQ+G+++++Y Y +PK+ YQ + W+++LI+L++G
Sbjct: 58 LIRPQFGWINQRYARVEYSPTRAKPKFKKYQCILWVLSLIILIVG 102
>gi|224008324|ref|XP_002293121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971247|gb|EED89582.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 257
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 19/194 (9%)
Query: 55 YSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLM 114
+ F+P N ++GPS TL LG + LIV++N+ +RL+S M LHAG+IH ++NM +L
Sbjct: 10 WKFEPLSVNPMIGPSAETLLRLGAKESYLIVQENEIWRLVSPMVLHAGVIHFLLNMFALW 69
Query: 115 LVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSEL 174
V +EQ GF +++ GG++LS + E ++VGASG +FGL+G +S++
Sbjct: 70 YVGKAIEQIHGFFPAVVQFVVPAVGGTILSAIF---LPEYITVGASGGIFGLIGACISDI 126
Query: 175 IANWTIYANKCTS-----------LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGV 223
+ NW + N+ + L VL I +N G P VDN H+GG G
Sbjct: 127 VMNWNLLFNEFVNERGVRLSHARVLVVLFLDIVVNCLVGLTP---FVDNFTHLGGMILGF 183
Query: 224 LLGF--ILFLRPQY 235
L G I + P++
Sbjct: 184 LCGLSTIQLVSPRF 197
>gi|397602203|gb|EJK58107.1| hypothetical protein THAOC_21791 [Thalassiosira oceanica]
Length = 618
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 101/194 (52%), Gaps = 19/194 (9%)
Query: 52 LGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMT 111
L + +P N ++GPS TL +G +LIV + + YRL S M LHAG+IH ++NM
Sbjct: 316 LNGWEVEPLSVNPMIGPSAETLLKMGAKQTSLIVNQGEWYRLFSPMVLHAGLIHYLLNMM 375
Query: 112 SLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML 171
+L + +EQ GFA A L+++ GG++LS L E +SVGASG +FGL+G +
Sbjct: 376 ALWFIGKAVEQCHGFAAAAILFIIPAVGGTILSALF---LPEYISVGASGGIFGLIGACV 432
Query: 172 SELIANWTIYANKCTSLSVLGSV-------------IALNLAFGFIPGVDGVDNLAHIGG 218
++++ NW + +K + + G+ I +N G P VDN H+GG
Sbjct: 433 ADILINWRLLFSKHVNSTKDGTRFRHIKVLMYLLFDIVINCLVGLTP---FVDNFTHLGG 489
Query: 219 FASGVLLGFILFLR 232
G + G R
Sbjct: 490 MVYGFMCGLSTIER 503
>gi|219126391|ref|XP_002183442.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405198|gb|EEC45142.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 104/191 (54%), Gaps = 16/191 (8%)
Query: 52 LGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMT 111
L + F+P + N + GPS TL +G L I + + +R+ + LHAGIIH V+NM
Sbjct: 7 LNDWRFEPIRSNPMFGPSAETLIKMGALYAPYIHDEQEWFRIFVPIVLHAGIIHYVINML 66
Query: 112 SLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML 171
++ L+ +E+ G+ + A ++L+S GG++ S L +SVGASG +FGLLG L
Sbjct: 67 AIGLIGRSVERVHGWLKTALIFLISSVGGNIASALL---MPSAISVGASGGIFGLLGLCL 123
Query: 172 SELIANWTI---------YANKCTSLSV-LGSVIALNLAFGFIPGVDGVDNLAHIGGFAS 221
+++ ANW + Y+ S+ V L +ALN++ G P +DN AH+GGF
Sbjct: 124 ADVCANWHVIQASRDDPSYSFPIRSVVVWLIFEVALNVSIGLTP---YIDNFAHMGGFLY 180
Query: 222 GVLLGFILFLR 232
G G + R
Sbjct: 181 GFTFGLAIVQR 191
>gi|291002015|ref|XP_002683574.1| predicted protein [Naegleria gruberi]
gi|284097203|gb|EFC50830.1| predicted protein [Naegleria gruberi]
Length = 168
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 7/171 (4%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKN-QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
N L+GP +TL LG LI+ N Q YRLL+ ++LH GI+HL +NM M V LE
Sbjct: 1 NPLIGPPEATLVQLGAKQGTLIISPNWQVYRLLTPIFLHGGIVHLCLNMMWQMSVMLPLE 60
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
+ +G + +YL+SG GG+LLS L EIV+VGAS +LFG+LG + ++L NW
Sbjct: 61 RHWGCIFVCFIYLISGVGGNLLSALF---LPEIVTVGASSSLFGILGGIYADLWMNWRYM 117
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ ++ + + G IP +DN AH+GG G L I R
Sbjct: 118 PSPKRDFILITIQVVAQVIVGLIP---WIDNFAHVGGLLVGFLSTMIFIPR 165
>gi|384495876|gb|EIE86367.1| hypothetical protein RO3G_11078 [Rhizopus delemar RA 99-880]
Length = 396
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 92/163 (56%), Gaps = 6/163 (3%)
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
TL +L G NQ +RL+ +++HAGIIH +VNM + + + LE+ G R A
Sbjct: 178 TLEELCGFGGFSSGTPNQSFRLVLPIFMHAGIIHFLVNMLTHLRLGVDLEKALGTPRYAL 237
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
LY+ SG G +LS + + S G SGALFGL+G M +++ NW I + +L L
Sbjct: 238 LYMASGIWGFVLSAMLSQNLS--ASTGCSGALFGLIGYMFIDVLVNWKILPHPVRNLMNL 295
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF-LRP 233
++L G +P G+DN AHIGGF G+L+G ++ +RP
Sbjct: 296 LMSTVISLVLGLLP---GLDNFAHIGGFTVGILMGMLVAPMRP 335
>gi|330818784|ref|XP_003291518.1| hypothetical protein DICPUDRAFT_49886 [Dictyostelium purpureum]
gi|325078290|gb|EGC31949.1| hypothetical protein DICPUDRAFT_49886 [Dictyostelium purpureum]
Length = 202
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ + +R S ++LH GI H ++NM + + V +LE+ +G RI P+YLL G G+L S +
Sbjct: 3 QGEWWRFFSPIFLHVGIFHYLMNMATQLRVGMQLERAYGGHRIVPIYLLCGVMGNLCSAI 62
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG-FIP 205
+ V VGASGA+FG LG +L++LI NW + A + L I + A G F+P
Sbjct: 63 M---LPQSVQVGASGAIFGFLGVLLADLIRNWGVLARPYLNCGTLAFTIITSFAVGLFLP 119
Query: 206 GVDGVDNLAHIGGFASGVLLGFIL 229
GVDN AH GGF G+L G+I
Sbjct: 120 ---GVDNYAHFGGFIMGILTGWIF 140
>gi|57088635|ref|XP_547222.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Canis lupus
familiaris]
Length = 856
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 24/189 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W + A + L +V+ FG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG+ L F YI+ G K+ Y++ C II
Sbjct: 767 -WIDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIV 807
Query: 268 LILLVLGYI 276
++ LG +
Sbjct: 808 FQVVFLGLL 816
>gi|348585385|ref|XP_003478452.1| PREDICTED: inactive rhomboid protein 1-like [Cavia porcellus]
Length = 856
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 24/189 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG+ L F YI+ G K+ Y++ C II
Sbjct: 767 -WIDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIII 807
Query: 268 LILLVLGYI 276
+ LG +
Sbjct: 808 FQAVFLGLL 816
>gi|419760008|ref|ZP_14286293.1| integral membrane protein, Rhomboid family [Thermosipho africanus
H17ap60334]
gi|407515047|gb|EKF49833.1| integral membrane protein, Rhomboid family [Thermosipho africanus
H17ap60334]
Length = 223
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ + L + G +V Q +R+++SM++H G IHL+ NM +L + +E +G
Sbjct: 28 PNEAVLYLMFGAQYGPLVSHGQWFRIVTSMFVHGGFIHLIFNMYALFFLGRIVENVYGTE 87
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
+ Y LSG G+L + + + SVGASGA+FGL+G + + T Y+ K +
Sbjct: 88 KFLTFYFLSGIVGNLATQIFYYNS---FSVGASGAIFGLIGVLFAAGFRKDTPYSLKPIT 144
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
S L +I +N+ FG +PG + ++N AHIGGF +G+LLG+++ P Y Y
Sbjct: 145 GSALLPMIVINIIFGIMPGTN-INNAAHIGGFLTGMLLGYMI---PLYDY 190
>gi|217077443|ref|YP_002335161.1| integral membrane protein, Rhomboid family [Thermosipho africanus
TCF52B]
gi|217037298|gb|ACJ75820.1| integral membrane protein, Rhomboid family [Thermosipho africanus
TCF52B]
Length = 223
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ + L + G +V Q +R+++SM++H G IHL+ NM +L + +E +G
Sbjct: 28 PNEAVLYLMFGAQYGPLVSHGQWFRIVTSMFVHGGFIHLIFNMYALFFLGRIVENVYGTE 87
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
+ Y LSG G+L + + + SVGASGA+FGL+G + + T Y+ K +
Sbjct: 88 KFLTFYFLSGIVGNLATQIFYYNS---FSVGASGAIFGLIGVLFAAGFRKDTPYSLKPIT 144
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
S L +I +N+ FG +PG + ++N AHIGGF +G+LLG+++ P Y Y
Sbjct: 145 GSALLPMIVINIIFGIMPGTN-INNAAHIGGFLTGMLLGYMI---PLYDY 190
>gi|219110511|ref|XP_002177007.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411542|gb|EEC51470.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 261
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 28/215 (13%)
Query: 52 LGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMT 111
L + F P N L GPS L D G LIV Q +R+ + ++LHAG++H +NM
Sbjct: 7 LNGWKFAPLDVNPLFGPSAQALLDAGARQTALIVDDGQWFRIFTPIFLHAGLVHYGINML 66
Query: 112 SLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML 171
+ + +E+ G L+ + G GG++L + + VSVGASG +FGL+G L
Sbjct: 67 AFWFIGGAIEETHGIINTIVLFFIPGIGGNILGAIF---LPQYVSVGASGGIFGLIGGCL 123
Query: 172 SELIANWTI------------YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGF 219
+++ NW I + +++ L I +N+ G P +DN H+GG
Sbjct: 124 ADIFLNWNILFIKEYEDDTLTWRKNAVAIAWLVLDIVINVVLGLTP---YIDNFTHLGGL 180
Query: 220 ASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQP 254
G+L GF + + P +A G+ H P
Sbjct: 181 VYGLLCGFSM-IEP---------LAVGFFGVHTSP 205
>gi|20071092|gb|AAH27346.1| Rhomboid family 1 (Drosophila) [Mus musculus]
Length = 856
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFVSGLFLSFAFLPYISFG 794
>gi|148691816|gb|EDL23763.1| rhomboid family 1 (Drosophila) [Mus musculus]
Length = 856
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFVSGLFLSFAFLPYISFG 794
>gi|226437617|ref|NP_034247.2| inactive rhomboid protein 1 [Mus musculus]
gi|190360227|sp|Q6PIX5.2|RHDF1_MOUSE RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Epidermal growth factor receptor-related protein;
AltName: Full=Rhomboid family member 1
Length = 856
Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFVSGLFLSFAFLPYISFG 794
>gi|71795631|ref|NP_001025205.1| inactive rhomboid protein 1 [Rattus norvegicus]
gi|123781648|sp|Q499S9.1|RHDF1_RAT RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|71121786|gb|AAH99777.1| Rhomboid 5 homolog 1 (Drosophila) [Rattus norvegicus]
gi|149052201|gb|EDM04018.1| rhomboid family 1 (Drosophila) [Rattus norvegicus]
Length = 856
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFVSGLFLSFAFLPYISFG 794
>gi|335284752|ref|XP_003124711.2| PREDICTED: inactive rhomboid protein 1-like [Sus scrofa]
Length = 855
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFVSGLFLSFAFLPYISFG 793
>gi|395515582|ref|XP_003761980.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1
[Sarcophilus harrisii]
Length = 858
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 24/190 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +YLLSG G+L S +
Sbjct: 654 DQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIF 713
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 714 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 768
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F YI+ G K+ Y++ C II
Sbjct: 769 -WIDNFAHISGFISGFFLSFAFL----------PYISFG--------KFDLYRKRCQIIV 809
Query: 268 LILLVLGYIT 277
++ LG ++
Sbjct: 810 FQIIFLGLLS 819
>gi|354499596|ref|XP_003511894.1| PREDICTED: inactive rhomboid protein 1-like [Cricetulus griseus]
gi|344254275|gb|EGW10379.1| Rhomboid family member 1 [Cricetulus griseus]
Length = 856
Score = 97.8 bits (242), Expect = 5e-18, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFISGLFLSFAFLPYISFG 794
>gi|225572886|ref|ZP_03781641.1| hypothetical protein RUMHYD_01077 [Blautia hydrogenotrophica DSM
10507]
gi|225039751|gb|EEG49997.1| peptidase, S54 family [Blautia hydrogenotrophica DSM 10507]
Length = 222
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 9/161 (5%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G + LIV + YRL +SM+LH G+ HL NM L ++ LE+ G + +YL S
Sbjct: 59 GAANAALIVEAKEYYRLFTSMFLHFGMAHLANNMLVLYVIGDNLERAVGKVKYLLIYLFS 118
Query: 137 GFGGSLLSC-LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
G GG++LSC L ++ VS GASGA+FG++G ML L+AN + L+ VI
Sbjct: 119 GLGGNILSCYLEYQEGALSVSAGASGAIFGVMGAMLYVLLANH----GRLEDLTARQIVI 174
Query: 196 --ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+L FGF GVDN AH+GG G L+ +L+ R +
Sbjct: 175 MAGFSLYFGFTS--SGVDNAAHVGGLICGFLVAMLLYHRKR 213
>gi|410985425|ref|XP_003999023.1| PREDICTED: inactive rhomboid protein 1 [Felis catus]
Length = 856
Score = 97.1 bits (240), Expect = 9e-18, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W + A + L +V+ FG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFISGLFLSFAFLPYISFG 794
>gi|183396440|gb|ACC62115.1| rhomboid family 1 (predicted) [Rhinolophus ferrumequinum]
Length = 856
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFVSGLFLSFAFLPYVSFG 794
>gi|284005108|ref|NP_001164883.1| rhomboid family member 1 [Oryctolagus cuniculus]
gi|218157236|gb|ACK58461.1| rhomboid family 1 (predicted) [Oryctolagus cuniculus]
Length = 856
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AH+ GF SG+ L F YI+ G K+ Y++ C II
Sbjct: 767 -WIDNFAHVSGFVSGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIV 807
Query: 268 LILL 271
L+
Sbjct: 808 FQLV 811
>gi|441659440|ref|XP_004091347.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1
[Nomascus leucogenys]
Length = 855
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFISGLFLSFAFLPYISFG 793
>gi|426380485|ref|XP_004056893.1| PREDICTED: inactive rhomboid protein 1-like [Gorilla gorilla
gorilla]
Length = 876
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 672 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 731
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 732 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 786
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 787 -WIDNFAHISGFISGLFLSFAFLPYISFG 814
>gi|15680161|gb|AAH14425.1| Rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
Length = 855
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFISGLFLSFAFLPYISFG 793
>gi|10438710|dbj|BAB15318.1| unnamed protein product [Homo sapiens]
Length = 855
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFISGLFLSFAFLPYISFG 793
>gi|403273152|ref|XP_003928385.1| PREDICTED: inactive rhomboid protein 1 [Saimiri boliviensis
boliviensis]
Length = 852
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 648 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 707
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 708 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 762
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 763 -WIDNFAHISGFISGLFLSFAFLPYISFG 790
>gi|397476068|ref|XP_003809433.1| PREDICTED: inactive rhomboid protein 1 [Pan paniscus]
Length = 876
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 672 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 731
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 732 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 786
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 787 -WIDNFAHISGFISGLFLSFAFLPYISFG 814
>gi|390471022|ref|XP_003734416.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Callithrix jacchus]
Length = 836
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 632 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 691
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 692 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 746
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 747 -WIDNFAHISGFISGLFLSFAFLPYISFG 774
>gi|332844857|ref|XP_510701.3| PREDICTED: inactive rhomboid protein 1 [Pan troglodytes]
gi|410226938|gb|JAA10688.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410253062|gb|JAA14498.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410292752|gb|JAA24976.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410338761|gb|JAA38327.1| rhomboid 5 homolog 1 [Pan troglodytes]
Length = 855
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFISGLFLSFAFLPYISFG 793
>gi|297697614|ref|XP_002825944.1| PREDICTED: inactive rhomboid protein 1 [Pongo abelii]
Length = 855
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFISGLFLSFAFLPYISFG 793
>gi|190360186|sp|B1MT31.1|RHDF1_CALMO RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|169246092|gb|ACA51068.1| rhomboid family 1 (predicted) [Callicebus moloch]
Length = 855
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFISGLFLSFAFLPYISFG 793
>gi|190360185|sp|B0VX73.1|RHDF1_CALJA RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|167427357|gb|ABZ80332.1| rhomboid family 1 (predicted) [Callithrix jacchus]
Length = 855
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFISGLFLSFAFLPYISFG 793
>gi|281183140|ref|NP_001162285.1| inactive rhomboid protein 1 [Papio anubis]
gi|190360187|sp|A9L8T6.1|RHDF1_PAPAN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|160904112|gb|ABX52099.1| rhomboid 5 homolog 1 (predicted) [Papio anubis]
Length = 855
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFISGLFLSFAFLPYISFG 793
>gi|190341097|ref|NP_071895.3| inactive rhomboid protein 1 [Homo sapiens]
gi|426380501|ref|XP_004056901.1| PREDICTED: inactive rhomboid protein 1-like [Gorilla gorilla
gorilla]
gi|190360226|sp|Q96CC6.2|RHDF1_HUMAN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Epidermal growth factor receptor-related protein;
AltName: Full=Rhomboid 5 homolog 1; AltName:
Full=Rhomboid family member 1; AltName: Full=p100hRho
gi|66350797|emb|CAI95608.1| rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
gi|119606282|gb|EAW85876.1| rhomboid 5 homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158255790|dbj|BAF83866.1| unnamed protein product [Homo sapiens]
Length = 855
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 766 -WIDNFAHISGFISGLFLSFAFLPYISFG 793
>gi|149750980|ref|XP_001494786.1| PREDICTED: inactive rhomboid protein 1-like [Equus caballus]
Length = 856
Score = 95.9 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFISGLFLSFAFLPYISFG 794
>gi|219109878|ref|XP_002176692.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411227|gb|EEC51155.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 669
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 12 RAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIS 71
R + T V+ VC + ++ N+ ++ D EN ++GPS +
Sbjct: 330 RPYFTYVLLFVCTANMIASIAANDWTVESLD-------------------ENPMIGPSAA 370
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
TL +G D LIV + +RLL+S LHAG++H +NM +L V +E G+
Sbjct: 371 TLIRMGAKDSYLIVHAGEGWRLLTSTILHAGLVHYFINMLALWFVGGAIEMSHGWISAMI 430
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN-------- 183
++ S GG +LS + E ++VGASG +FG +G L+++I NW + +
Sbjct: 431 IFSSSAIGGIILSAIF---LPEFITVGASGGIFGFIGACLADIIMNWKLLFDGLLDENGK 487
Query: 184 ---KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ VL IALN G P VDN H+GG A G L G R
Sbjct: 488 KHQHTMVVVVLLFDIALNSIIGLTP---YVDNFTHLGGMAYGFLCGLSTIER 536
>gi|157427926|ref|NP_001098870.1| inactive rhomboid protein 1 [Bos taurus]
gi|190360184|sp|A7YWH9.1|RHDF1_BOVIN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|157279163|gb|AAI34589.1| RHBDF1 protein [Bos taurus]
gi|296473636|tpg|DAA15751.1| TPA: rhomboid family 1 [Bos taurus]
Length = 856
Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG+ L F YI+ G K+ Y++ C II
Sbjct: 767 -WIDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIV 807
Query: 268 LILL 271
L+
Sbjct: 808 FQLV 811
>gi|290982897|ref|XP_002674166.1| predicted protein [Naegleria gruberi]
gi|284087754|gb|EFC41422.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 8/172 (4%)
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
N +GPS STL LG I ++ Q +RL + + +HAG +HL +N+ +++
Sbjct: 218 SSNPSIGPSSSTLLLLGAKSAYKIKKEYQLWRLFTPLIMHAGFLHLFMNLFVQVMICMGY 277
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E+ + + R+ P+Y+++G GG+LLSC+ + VSVGASGA+ GL+G ++ +I W
Sbjct: 278 EKTWKWYRVLPIYIIAGVGGNLLSCV---ALPDSVSVGASGAIMGLIGAKVANIIIRWKK 334
Query: 181 YANKCTSLSVL--GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
+ + + G +I + L + F D VD H+GG G ++GF F
Sbjct: 335 IPTQPKIMQCISVGFIIVITLLWSF---SDYVDYAGHLGGLMCGFIIGFACF 383
>gi|325264281|ref|ZP_08131012.1| putative small hydrophobic molecule transporter protein
[Clostridium sp. D5]
gi|324030352|gb|EGB91636.1| putative small hydrophobic molecule transporter protein
[Clostridium sp. D5]
Length = 223
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 92/152 (60%), Gaps = 5/152 (3%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+V +Q YR+ +S++LH GI HL+ NM L + + LE E G + +Y +SG GG++L
Sbjct: 69 VVEGHQYYRMFTSLFLHFGIEHLLNNMVLLGALGWNLELETGRIKFLIIYFISGLGGNML 128
Query: 144 SC-LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
S ++ K +VS GASGA+FGL+G +L ++ N + T+ +L V+ L+L FG
Sbjct: 129 SLWMNMSTDKMVVSAGASGAIFGLMGALLCVVLKNHG-RVGRLTNRGLLFMVV-LSLYFG 186
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
F GVDN AHIGG G ++ +L+ RP+
Sbjct: 187 FTS--SGVDNAAHIGGLVCGFVMAAVLYRRPK 216
>gi|299470381|emb|CBN78430.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 403
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 96/175 (54%), Gaps = 9/175 (5%)
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
N LLGPSI TL LG LI ++ Q +RLL+ + LH G++H+ +N+TS + L
Sbjct: 202 DSNPLLGPSIETLMALGAKHLTLI-QEGQVWRLLTPILLHGGVLHIFMNLTSQFRMGTFL 260
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E+ +G +Y + G GG+LLSC+ K V VGASGA++ ++G LS ++ W
Sbjct: 261 EERWGTRNWLIVYWVGGLGGNLLSCVASPDK---VGVGASGAIYAIMGAWLSHVLCTWNE 317
Query: 181 YAN--KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
K L+ + + +A P VD AH+GG +G+L+G+ LF +P
Sbjct: 318 EDEFAKGAQLTQVVLYTMVGMAASLAPIVDWA---AHVGGLVTGILVGWALFHKP 369
>gi|190195531|gb|ACE73629.1| rhomboid family 1 (predicted) [Sorex araneus]
Length = 868
Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 664 DQFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 723
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 724 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 778
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 779 -WIDNFAHISGFISGLFLSFAFLPYISFG 806
>gi|344292280|ref|XP_003417856.1| PREDICTED: inactive rhomboid protein 1-like [Loxodonta africana]
Length = 856
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A+ + L +V+ FG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILASPWRAFFKLLAVVLFLFTFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFVSGLFLSFAFLPYISFG 794
>gi|351711230|gb|EHB14149.1| Rhomboid family member 1 [Heterocephalus glaber]
Length = 857
Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 97/190 (51%), Gaps = 25/190 (13%)
Query: 88 NQKYRLLSSMWLHAG-IIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+Q YRL S++LHAG I+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGQILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAI 711
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPG 206
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 712 FLPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP- 767
Query: 207 VDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWII 266
+DN AHI GF SG+ L F YI+ G K+ Y++ C II
Sbjct: 768 --WIDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQII 807
Query: 267 ALILLVLGYI 276
+ LG +
Sbjct: 808 IFQAVFLGLL 817
>gi|123479365|ref|XP_001322841.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121905694|gb|EAY10618.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 377
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 10/187 (5%)
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
EN + GPS L +G ++I+ +R +SM+LH+G IHLV+ + + S R+
Sbjct: 134 SENPMFGPSQEVLLLMGAKQASVIL-AGSWWRFFTSMFLHSGAIHLVIILIFAIFTS-RV 191
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E++ GF R ++L+SG G++LSCL E++S GASGA+FG +G + ++L A W
Sbjct: 192 ERDTGFWRAFFVFLVSGMYGTILSCLL---VPELISCGASGAIFGYIGLLFADLFAGWRS 248
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
K L +L + + + G P +DN +IGGF G+L F L L P + S
Sbjct: 249 NPKKGRDLGILVGLTVVGIILGLTP---FIDNFNNIGGFIMGLL--FALMLLPNLSFGSC 303
Query: 241 KYIAAGY 247
+ + G+
Sbjct: 304 ERMCHGF 310
>gi|317472135|ref|ZP_07931467.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
gi|316900539|gb|EFV22521.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
Length = 309
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 9/174 (5%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL + + + + G L ++ + YRL++S +LH G HL NM +L+ RLE
Sbjct: 140 YLWSAASTEILNWGALTWMHAFKQGELYRLVTSNFLHNGFDHLFNNMIVFVLIGSRLEPI 199
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV-SVGASGALFGLLGTMLSELIANWTIYA 182
FG AR LY+ +G GS++S +++ E+V SVGASGA+FGL+G ML W +
Sbjct: 200 FGRARYVALYMGAGLCGSIVSAVYYMNMGEMVASVGASGAIFGLIGAML------WILIK 253
Query: 183 NKCTSLSVLGSVIALNLAFGFIPGVD--GVDNLAHIGGFASGVLLGFILFLRPQ 234
N+ G +AL +A G GVDN AHIGG G LL +L+ + +
Sbjct: 254 NRGYQKEFYGGGVALMIAGSLYHGFSTMGVDNAAHIGGCIGGFLLAILLYRQDR 307
>gi|395835625|ref|XP_003790777.1| PREDICTED: inactive rhomboid protein 1 [Otolemur garnettii]
Length = 856
Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I + L +V+ FG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILVRPWRAFFKLLAVVLFLFTFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFISGLFLSFAFLPYISFG 794
>gi|167748326|ref|ZP_02420453.1| hypothetical protein ANACAC_03070 [Anaerostipes caccae DSM 14662]
gi|167652318|gb|EDR96447.1| peptidase, S54 family [Anaerostipes caccae DSM 14662]
Length = 280
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 9/174 (5%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL + + + + G L ++ + YRL++S +LH G HL NM +L+ RLE
Sbjct: 111 YLWSAASTEILNWGALTWMHAFKQGELYRLVTSNFLHNGFDHLFNNMIVFVLIGSRLEPI 170
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV-SVGASGALFGLLGTMLSELIANWTIYA 182
FG AR LY+ +G GS++S +++ E+V SVGASGA+FGL+G ML W +
Sbjct: 171 FGRARYVALYMGAGLCGSIVSAVYYMNMGEMVASVGASGAIFGLIGAML------WILIK 224
Query: 183 NKCTSLSVLGSVIALNLAFGFIPGVD--GVDNLAHIGGFASGVLLGFILFLRPQ 234
N+ G +AL +A G GVDN AHIGG G LL +L+ + +
Sbjct: 225 NRGYQKEFYGGGVALMIAGSLYHGFSTMGVDNAAHIGGCIGGFLLAILLYRQDR 278
>gi|355709783|gb|EHH31247.1| p100hRho [Macaca mulatta]
Length = 855
Score = 94.4 bits (233), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AH GF SG+ L F +G
Sbjct: 766 -WIDNFAHTSGFISGLFLSFAFLPYISFG 793
>gi|219110513|ref|XP_002177008.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411543|gb|EEC51471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 570
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 118/235 (50%), Gaps = 21/235 (8%)
Query: 52 LGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMT 111
L + F P N L+GPS L DLG +LI+ + Q +R+++ ++LHAGI+H + NM
Sbjct: 246 LSGWRFAPLNINPLIGPSSEQLIDLGARQTSLILEEGQWFRIVTPIFLHAGIVHYLTNML 305
Query: 112 SLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML 171
+ + +E+ G A L+ + G GG++L + +SVGASG FG++G
Sbjct: 306 AFWFIGGAIEEAHGIATAIVLFFIPGVGGNILGATF---LPQYISVGASGGTFGMIGGYF 362
Query: 172 SELIANWTIYANKCTSLSVLG---SVIAL-NLAFGFIP----GVDG-VDNLAHIGGFASG 222
++++ NW I ++ VL ++ A+ LA G I GV +DN H+G G
Sbjct: 363 ADIVLNWNILCSRDHDEDVLNWRKNIAAIARLAIGIIALLVLGVTPFIDNFTHLGALCYG 422
Query: 223 VLLG-FILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGYI 276
+L G F + P G + R+ + ++Q+ I+++ LLV+ +
Sbjct: 423 LLCGLFAIEPVPLEGSIVR--------LPSRKMSDLLFRQIGAIVSVFLLVITSV 469
>gi|404370657|ref|ZP_10975977.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
gi|226913215|gb|EEH98416.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
Length = 325
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 58 QPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVS 117
+ K L+ I TL +G N+++ + YRLL+S +LH GIIH+ NM++L ++
Sbjct: 153 EVIKSRNLIDIDIYTLIQMGA-KVNVLINSGEIYRLLTSAFLHGGIIHIFFNMSALNIIG 211
Query: 118 YRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIAN 177
+E +G R +Y++S GGS++S L K +SVGASGA+FGLLG ML +
Sbjct: 212 REVEAVYGSKRYIAIYVISALGGSVVSYLF---KPNSISVGASGAIFGLLGAMLIFGLKE 268
Query: 178 WTIYANKCTSLSVLGSVIALNLAFGF-IPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
+ + + I LN+ G IP +DN AH+GG G + FILF + +
Sbjct: 269 RDKIGKQY--MKNILETIGLNVIIGITIP---NIDNFAHLGGLILGTITSFILFKKKNF 322
>gi|226822866|gb|ACO83098.1| rhomboid family 1 (predicted) [Dasypus novemcinctus]
Length = 856
Score = 93.6 bits (231), Expect = 9e-17, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSICFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W + A + L +V+ FG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLLAVVLSLFTFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG+ L F +G
Sbjct: 767 -WIDNFAHISGFVSGLFLSFAFLPYISFG 794
>gi|67606699|ref|XP_666769.1| F6D8.20 [Cryptosporidium hominis TU502]
gi|54657827|gb|EAL36541.1| F6D8.20 [Cryptosporidium hominis]
Length = 464
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 44 HQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGI 103
+ V+ + YS + YL GP + D+G LD NL VR Q RL S WLH G
Sbjct: 132 QELVISQLTNGYSMIKIPDGYLFGPPPQVVFDMGALDTNL-VRNGQLARLFWSFWLHTGF 190
Query: 104 IHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGAL 163
IHL +N++ +++ LE + R A LYLL G G+L S + +S G+S
Sbjct: 191 IHLFINLSCQIILGIILETRWVIWRYAILYLLGGISGNLASAVLDPC---TISAGSSACF 247
Query: 164 FGLLGTMLSELIANW--TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFAS 221
F LL ++ L+ NW + + L ++ S+I ++L+F + DN AHIGGF +
Sbjct: 248 FALLAGIIVLLLENWRNSRWQFLYVLLVIIASLIGISLSF-----MSNTDNWAHIGGFVA 302
Query: 222 GVLLGF 227
G+L F
Sbjct: 303 GLLWSF 308
>gi|66363006|ref|XP_628469.1| rhomboid family membrane associated protease, 7 transmembrane
domain [Cryptosporidium parvum Iowa II]
gi|46229491|gb|EAK90309.1| rhomboid family membrane associated protease, 7 transmembrane
domain [Cryptosporidium parvum Iowa II]
gi|323508507|dbj|BAJ77147.1| cgd7_3020 [Cryptosporidium parvum]
gi|323510219|dbj|BAJ78003.1| cgd7_3020 [Cryptosporidium parvum]
Length = 464
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 11/186 (5%)
Query: 44 HQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGI 103
+ V+ + YS + YL GP + D+G LD NL VR Q RL S WLH G
Sbjct: 132 QELVISQLTNGYSIIKIPDGYLFGPPPQVVFDMGALDTNL-VRNGQLARLFWSFWLHTGF 190
Query: 104 IHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGAL 163
IHL +N++ +++ LE + R A LYLL G G+L S + +S G+S
Sbjct: 191 IHLFINLSCQIILGIILETRWVIWRYAILYLLGGISGNLASAVLDPC---TISAGSSACF 247
Query: 164 FGLLGTMLSELIANW--TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFAS 221
F LL ++ L+ NW + + L ++ S+I ++L+F + DN AHIGGF +
Sbjct: 248 FALLAGIIVLLLENWRNSRWQFLYVLLVIIASLIGISLSF-----MSNTDNWAHIGGFVA 302
Query: 222 GVLLGF 227
G+L F
Sbjct: 303 GLLWSF 308
>gi|50345116|ref|NP_001002228.1| inactive rhomboid protein 1 [Danio rerio]
gi|82184057|sp|Q6GMF8.1|RHDF1_DANRE RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|49257555|gb|AAH74097.1| Zgc:91984 [Danio rerio]
Length = 857
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 24/187 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +Y+LSG G+L S +
Sbjct: 653 DQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIF 712
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + ELI +W I A + + L V+ AFG +P
Sbjct: 713 LPYRAE---VGPAGSQFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGLLP-- 767
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F YI+ G + Y++ C II
Sbjct: 768 -WIDNFAHISGFISGFFLSFAFL----------PYISFG--------RLDMYRKRCQIII 808
Query: 268 LILLVLG 274
+++ LG
Sbjct: 809 FLVVFLG 815
>gi|19483909|gb|AAH23469.1| Rhbdf1 protein, partial [Mus musculus]
Length = 621
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 417 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 476
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 477 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 531
Query: 208 DGVDNLAHIGGFASGVLLGF 227
+DN AHI GF SG+ L F
Sbjct: 532 -WIDNFAHISGFVSGLFLSF 550
>gi|301769557|ref|XP_002920196.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid family member 1-like
[Ailuropoda melanoleuca]
Length = 855
Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 92 RLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGK 151
RL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S + +
Sbjct: 655 RLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYR 714
Query: 152 KEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVD 211
E VG +G+ FG+L + EL +W + A + L +V+ FG +P +D
Sbjct: 715 AE---VGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLP---WID 768
Query: 212 NLAHIGGFASGVLLGFILFLRPQYG 236
N AHI GF SG+ L F +G
Sbjct: 769 NFAHISGFISGLFLSFAFLPYISFG 793
>gi|317500904|ref|ZP_07959115.1| rhomboid protease GluP [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089196|ref|ZP_08338098.1| hypothetical protein HMPREF1025_01681 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439355|ref|ZP_08618969.1| hypothetical protein HMPREF0990_01363 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316897702|gb|EFV19762.1| rhomboid protease GluP [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405748|gb|EGG85277.1| hypothetical protein HMPREF1025_01681 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336016163|gb|EGN45955.1| hypothetical protein HMPREF0990_01363 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 200
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 10/161 (6%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G + I + YR+ + M+LH GI HL+ NM L + + LE E G R +Y LS
Sbjct: 40 GAMYEPFITEGQEYYRIFTCMFLHFGITHLMNNMVMLGALGWNLELEIGKLRFIIIYFLS 99
Query: 137 GFGGSLLSCLHHKGKKE-IVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV- 194
G GG++LS + E VS GASGA+FGL+G +L +IAN + LS G +
Sbjct: 100 GIGGNILSLIAAISAGESAVSAGASGAVFGLMGALLYVVIAN----RGRLGQLSGRGMIF 155
Query: 195 -IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ L+L FG GVDN+AHIGG G + IL+ RP+
Sbjct: 156 MVVLSLYFGLTS--SGVDNMAHIGGLICGFIFAVILY-RPK 193
>gi|397645545|gb|EJK76880.1| hypothetical protein THAOC_01334 [Thalassiosira oceanica]
Length = 326
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 20/185 (10%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
++GPS TL LG D LIV + + +RL++S LHAG+IH +NM +L V+ +E
Sbjct: 1 MIGPSAETLVALGAKDSFLIVVEQEVWRLVTSGVLHAGLIHYFINMFALFYVAKAVESVH 60
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
GF ++ L+++S GG++LS + + ++VGASG + GL+G LS++I NW + N
Sbjct: 61 GFWAVSTLFVISSTGGTILSAIF---LPQYITVGASGGILGLIGACLSDIILNWNLLFND 117
Query: 185 ------------CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF--ILF 230
L VL + +N+ G P VDN +H+GG G L G I
Sbjct: 118 FVNPERRSRFAHAKVLVVLLLDVVVNIIIGMTP---FVDNWSHVGGMMYGFLCGLSTIHM 174
Query: 231 LRPQY 235
+ P++
Sbjct: 175 VSPRF 179
>gi|301623881|ref|XP_002941242.1| PREDICTED: rhomboid family member 1-like [Xenopus (Silurana)
tropicalis]
Length = 855
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 24/187 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RI+ +Y+LSG G+L S +
Sbjct: 651 DQVYRLWLSLFLHAGVLHCLVSVCFQMTILRDLEKLAGWHRISIIYILSGITGNLTSAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 711 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLFAVVIFLFTFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AH GF SG L F YI+ G K+ Y++ C II
Sbjct: 766 -WIDNFAHFAGFVSGFFLSFAFL----------PYISFG--------KFDMYRKRCQIII 806
Query: 268 LILLVLG 274
+L+ G
Sbjct: 807 FLLIFFG 813
>gi|153815443|ref|ZP_01968111.1| hypothetical protein RUMTOR_01678 [Ruminococcus torques ATCC 27756]
gi|145847302|gb|EDK24220.1| peptidase, S54 family [Ruminococcus torques ATCC 27756]
Length = 175
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 10/161 (6%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G + I + YR+ + M+LH GI HL+ NM L + + LE E G R +Y LS
Sbjct: 15 GAMYEPFITEGQEYYRIFTCMFLHFGITHLMNNMVMLGALGWNLELEIGKLRFIIIYFLS 74
Query: 137 GFGGSLLSCLHHKGKKE-IVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV- 194
G GG++LS + E VS GASGA+FGL+G +L +IAN + LS G +
Sbjct: 75 GIGGNILSLIAAISAGESAVSAGASGAVFGLMGALLYVVIAN----RGRLGQLSGRGMIF 130
Query: 195 -IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ L+L FG GVDN+AHIGG G + IL+ RP+
Sbjct: 131 MVVLSLYFGLTS--SGVDNMAHIGGLICGFIFAVILY-RPK 168
>gi|258566790|ref|XP_002584139.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905585|gb|EEP79986.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 489
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 47/240 (19%)
Query: 36 CPAKTADS-----HQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP +D +QC L + G LG + R G +D NQ
Sbjct: 188 CPDSQSDDRADPKNQCTLSQLCG------------LG-GVQDPRAGGSIDDK--PEPNQW 232
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG-----FGGSLLSC 145
+R + ++LHAG+IH+ VN+ + M++ +E+ G+ R A +Y SG FGG+ +
Sbjct: 233 FRFIIPIFLHAGLIHIGVNLLAQMIIGADMERNIGWWRFAIVYYASGIFGFVFGGNFAA- 291
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
I S GASG+LFG+L + EL+ W + T L + + ++ G +P
Sbjct: 292 ------PGIASTGASGSLFGILALCVLELLYKWNTISRPVTYLLTMILAVVISFVLGLLP 345
Query: 206 GVDGVDNLAHIGGFASGVLLGFILF-----LRPQYGYVSEKYI----AAGYDAKH--RQP 254
G+DN +HIGGF G++LG L LR + G VS Y+ A DAK RQP
Sbjct: 346 ---GLDNFSHIGGFLMGLVLGVCLLRSPDTLRERIG-VSTPYLSVNGAPSRDAKQFIRQP 401
>gi|345312945|ref|XP_003429322.1| PREDICTED: inactive rhomboid protein 1-like, partial
[Ornithorhynchus anatinus]
Length = 599
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 95/187 (50%), Gaps = 24/187 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RI+ +YLLSG G+L S +
Sbjct: 395 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRISIIYLLSGVTGNLASAIF 454
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 455 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 509
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F YI+ G ++ Y++ C II
Sbjct: 510 -WIDNFAHISGFISGFFLSFAFL----------PYISFG--------RFDLYRKRCQIIV 550
Query: 268 LILLVLG 274
L+ LG
Sbjct: 551 FQLVFLG 557
>gi|50547561|ref|XP_501250.1| YALI0B23078p [Yarrowia lipolytica]
gi|49647116|emb|CAG83503.1| YALI0B23078p [Yarrowia lipolytica CLIB122]
Length = 611
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 36 CPAKTA-DSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLL 94
CP T ++ +C L ++ G +G ++ G D I Q +R +
Sbjct: 314 CPNSTTLETDKCTLEELCG------------MG-----MKQTPGSDGGSITSGGQWWRFI 356
Query: 95 SSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEI 154
+ +++HAGIIH+ NM M + +E++ G R +Y G GG L + I
Sbjct: 357 TPIFMHAGIIHIGFNMLLQMTLGADIEKQIGIIRYFFIYFACGIGGFLFGGNYTP--DGI 414
Query: 155 VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLA 214
S GASG+LFG++ L +L+ NW+I+ N L + I ++ G +P G+DN +
Sbjct: 415 ASTGASGSLFGIIAIDLLDLLFNWSIFRNPVRILIIHIIEIVVSFVLGLLP---GLDNFS 471
Query: 215 HIGGFASGVLLGFILFLRP 233
HIGGF GVLLG + P
Sbjct: 472 HIGGFIVGVLLGIAILRSP 490
>gi|291548753|emb|CBL25015.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Ruminococcus torques L2-14]
Length = 206
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 89/159 (55%), Gaps = 19/159 (11%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I+ + YRL +S++LH GI HL+ NM L + E+E G R Y +SG GG+LL
Sbjct: 47 IIENQEYYRLFTSLFLHFGISHLLNNMVLLWALGSIFEKEAGKIRFLFCYFISGIGGNLL 106
Query: 144 S----CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN--KCTSLSVLGSVI-- 195
S +H ++IVS GASGA+FGL+G +L W ++AN + +LS G +I
Sbjct: 107 SLYWNIMH---DRQIVSAGASGAIFGLMGGLL------WIVFANRGRLGTLSGRGMLIMV 157
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
L+L FGF GVDNLAH+GG G L + + R
Sbjct: 158 VLSLYFGFTS--TGVDNLAHVGGLICGFLTALLTYRRKN 194
>gi|118098129|ref|XP_414944.2| PREDICTED: inactive rhomboid protein 1 [Gallus gallus]
Length = 853
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 95/187 (50%), Gaps = 24/187 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +YLLSG G+L S +
Sbjct: 649 DQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIF 708
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 709 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 763
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F YI+ G K+ Y++ C II
Sbjct: 764 -WIDNFAHISGFISGFFLSFAFL----------PYISFG--------KFDLYRKRCQIIV 804
Query: 268 LILLVLG 274
L+ +
Sbjct: 805 FQLIFIA 811
>gi|443925758|gb|ELU44527.1| rhomboid family protein [Rhizoctonia solani AG-1 IA]
Length = 1236
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 11/146 (7%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
NQ +R ++ ++LHAGIIH +NM + + +S ++E+E G LY +G G++L
Sbjct: 602 NQWFRFITPIFLHAGIIHFALNMFAQLTLSAQVEREMGSGAFLILYASAGIFGNVLG--- 658
Query: 148 HKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
G +V SVGASGA+FG + M +L+A+W I L++L + + +A GF+
Sbjct: 659 --GNFALVGVPSVGASGAIFGTVAVMWVDLLAHWKIEYRPGRKLAMLCVDLIIGVALGFV 716
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILF 230
P GVDN AH+GGF G+L +L+
Sbjct: 717 P---GVDNFAHLGGFLMGLLTAIVLY 739
>gi|326929278|ref|XP_003210794.1| PREDICTED: rhomboid family member 1-like [Meleagris gallopavo]
Length = 769
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 95/187 (50%), Gaps = 24/187 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +YLLSG G+L S +
Sbjct: 565 DQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIF 624
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 625 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 679
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F YI+ G K+ Y++ C II
Sbjct: 680 -WIDNFAHISGFISGFFLSFAFL----------PYISFG--------KFDLYRKRCQIIV 720
Query: 268 LILLVLG 274
L+ +
Sbjct: 721 FQLIFIA 727
>gi|154276072|ref|XP_001538881.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413954|gb|EDN09319.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 548
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 22/204 (10%)
Query: 36 CPAKT-----ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP T A + C L D+ G F+ K N + P+ + G LD NQ
Sbjct: 249 CPNTTSSDPSAPENLCRLSDLCG---FK--KTNKVHDPTPN-----GSLDDR--PEPNQW 296
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R + ++LHAG+IH+ NM + + + +E+ G+ R A +Y SG G +L +
Sbjct: 297 FRFIVPIFLHAGLIHIGFNMMAQLTIGADMERAIGWWRYAVVYFASGIFGFILGA--NFA 354
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
I S GASG+LFG+ +L+ +W+ +N L ++ IA++ G +P G+
Sbjct: 355 PAGIASTGASGSLFGIFALAFLDLLYSWSSRSNPVKELLIMLITIAISFVLGLLP---GL 411
Query: 211 DNLAHIGGFASGVLLGFILFLRPQ 234
DN +HIGGF G++LG + P
Sbjct: 412 DNFSHIGGFMVGLVLGISVLRSPD 435
>gi|224069971|ref|XP_002196233.1| PREDICTED: inactive rhomboid protein 1 [Taeniopygia guttata]
Length = 857
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 95/187 (50%), Gaps = 24/187 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +YLLSG G+L S +
Sbjct: 653 DQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIF 712
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 713 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 767
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F YI+ G K+ Y++ C II
Sbjct: 768 -WIDNFAHISGFISGFFLSFAFL----------PYISFG--------KFDLYRKRCQIIV 808
Query: 268 LILLVLG 274
L+ +
Sbjct: 809 FQLIFIA 815
>gi|440748391|ref|ZP_20927644.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
gi|436483215|gb|ELP39283.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
Length = 517
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R +RL+SSM+LH GI+HL +N+ L++ + +E FG + LY SG
Sbjct: 352 GANRRSETTGGDWWRLVSSMFLHGGIMHLFLNIYGLVIAALFVEPVFGRIKYFILYFASG 411
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L L+ N K L +G + +
Sbjct: 412 ICGSLASIYWY---ENTISVGASGAIFGLYGAVLGLLLTNAFPKDGKIGILMFIGPYVGV 468
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
NL G G+DN AHIGG SG + G IL+L
Sbjct: 469 NLLVGL---TGGIDNAAHIGGLVSGAVFGIILYL 499
>gi|331217798|ref|XP_003321577.1| hypothetical protein PGTG_03114 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300567|gb|EFP77158.1| hypothetical protein PGTG_03114 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 468
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 11/148 (7%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+ +QK+R + ++LHAG+IH ++N+ M S +E++ G R LYL SG G +L
Sbjct: 216 QPDQKFRFVLPLFLHAGLIHYLLNIAVQMTSSALIERQMGSLRFILLYLPSGIFGFILG- 274
Query: 146 LHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
G +V SVGASGA+F +L +LIA+W+I L L I L G
Sbjct: 275 ----GNFSLVGQPSVGASGAIFSTYAAVLVDLIAHWSIEYRPTRKLVFLVFEIVAGLLLG 330
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFILF 230
IP G+DN +HIGGF+ G+LL +LF
Sbjct: 331 LIP---GIDNFSHIGGFSMGILLAILLF 355
>gi|325090543|gb|EGC43853.1| rhomboid protein [Ajellomyces capsulatus H88]
Length = 530
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 22/204 (10%)
Query: 36 CPAKT-----ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP T A + C L D+ G F+ K N + P+ G LD NQ
Sbjct: 231 CPNTTTSDPSAPENLCPLSDLCG---FK--KTNKVHDPTPQ-----GSLDDK--PEPNQW 278
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R + ++LHAG+IH+ NM + + + +E+ G+ R A +Y SG G +L +
Sbjct: 279 FRFIVPIFLHAGLIHIGFNMMAQLTIGADMERTIGWWRYAVVYFASGIFGFILGA--NFA 336
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
I S GASG+LFG+ +L+ +W+ +N L ++ +A++ G +P G+
Sbjct: 337 PPGIPSTGASGSLFGIFALTFLDLLYSWSSRSNPVKELLIMLITVAISFVLGLLP---GL 393
Query: 211 DNLAHIGGFASGVLLGFILFLRPQ 234
DN +HIGGF G++LG + P
Sbjct: 394 DNFSHIGGFMVGLVLGISVLRSPD 417
>gi|328857613|gb|EGG06729.1| hypothetical protein MELLADRAFT_43423 [Melampsora larici-populina
98AG31]
Length = 517
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+ +Q +R + M+LHAG+IH +N+ M S +E++ G R LY+ SG G +L
Sbjct: 267 QPDQTFRFILPMFLHAGVIHYAINILVQMTSSALIERQMGSIRFLLLYIPSGIFGFILG- 325
Query: 146 LHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
G +V SVGASGA+F +L +L+A+W+I L L I LA G
Sbjct: 326 ----GNFSLVGQPSVGASGAIFSTHAAVLVDLVAHWSIEDRPARKLFFLLFEIIAGLALG 381
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFILF 230
IP G+DN +H+GGFA G+LL ILF
Sbjct: 382 LIP---GIDNFSHLGGFAMGLLLSLILF 406
>gi|325289903|ref|YP_004266084.1| rhomboid family protein [Syntrophobotulus glycolicus DSM 8271]
gi|324965304|gb|ADY56083.1| Rhomboid family protein [Syntrophobotulus glycolicus DSM 8271]
Length = 189
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 94/164 (57%), Gaps = 19/164 (11%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
+ G ++ L DLG Q +RLL+S+++H GI+HL++N +L+ V E F
Sbjct: 40 IFGAKVNQLIDLG-----------QYWRLLTSIFIHIGIVHLLLNSYALIAVGQISEAVF 88
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G + A LYLLSG GG+ S L E +S GASGA+FGLLG ++S N ++ +
Sbjct: 89 GHLKFALLYLLSGIGGATASYLF----SEAISAGASGAIFGLLGALVSYGWKNAGMW--R 142
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
++ L VI N+ FG I G+DN AHIGG +G+++G I
Sbjct: 143 SGLIANLLFVIGFNILFGLIT--TGIDNYAHIGGMLTGLIIGII 184
>gi|326672347|ref|XP_691851.4| PREDICTED: rhomboid family member 1-like [Danio rerio]
Length = 909
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +Y+LSG G+L S +
Sbjct: 705 DQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIF 764
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + + L V+ AFG +P
Sbjct: 765 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFTKLSCVVLFLFAFGLLP-- 819
Query: 208 DGVDNLAHIGGFASGVLLGF 227
+DN AHI GF SG L F
Sbjct: 820 -WIDNFAHICGFVSGFFLSF 838
>gi|225555969|gb|EEH04259.1| DHHC zinc finger membrane protein [Ajellomyces capsulatus G186AR]
Length = 540
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 22/204 (10%)
Query: 36 CPAKT-----ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP T A + C L D+ G F+ K N + P+ G LD NQ
Sbjct: 241 CPNTTTSDPFAPENLCPLSDLCG---FK--KTNKVHDPTPQ-----GSLDDK--PEPNQW 288
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R + ++LHAG+IH+ NM + + + +E+ G+ R A +Y SG G +L +
Sbjct: 289 FRFIVPIFLHAGLIHIGFNMMAQLTIGADMERTIGWWRYAVVYFASGIFGFILGA--NFA 346
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
I S GASG+LFG+ +L+ +W+ +N L ++ +A++ G +P G+
Sbjct: 347 PPGIPSTGASGSLFGIFALAFLDLLYSWSSRSNPVKELLIMLITVAISFVLGLLP---GL 403
Query: 211 DNLAHIGGFASGVLLGFILFLRPQ 234
DN +HIGGF G++LG + P
Sbjct: 404 DNFSHIGGFMVGLVLGISVLRSPD 427
>gi|348509157|ref|XP_003442118.1| PREDICTED: inactive rhomboid protein 1-like [Oreochromis niloticus]
Length = 858
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 24/187 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +Y+LSG G+L S +
Sbjct: 654 DQFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIF 713
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL W I A + + L V+ AFG +P
Sbjct: 714 LPYRAE---VGPAGSQFGILACLFVELFQCWQILAQPWRAFTKLLCVVLFLFAFGLLP-- 768
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F Y++ G + Y++ C II
Sbjct: 769 -WIDNFAHISGFISGFFLSFAFL----------PYVSFG--------RMDMYRKRCQIII 809
Query: 268 LILLVLG 274
+L+ +G
Sbjct: 810 FLLVFVG 816
>gi|399217023|emb|CCF73710.1| unnamed protein product [Babesia microti strain RI]
Length = 949
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 14/164 (8%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LGGL+ N I + YRL+ SM+LH +IH+V N+ + + +E ++GF
Sbjct: 181 PNARIFETLGGLNSNKIRNYKEYYRLVWSMFLHGSVIHMVFNLCCQIQSLWMIEPDWGFF 240
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R A LY +SG G+LLS + +VG+SGA++GL+G ++ I W +
Sbjct: 241 RTAGLYFVSGIFGNLLSAILDPCG---TTVGSSGAMYGLMGALIPYCIEYW-------KT 290
Query: 188 LSVLGSVIALNLAF---GFIPGVDG-VDNLAHIGGFASGVLLGF 227
+ S++ N F G I G+ G DN AH+GG +G+L GF
Sbjct: 291 IPRPFSILIFNCIFIIIGLISGLAGYTDNYAHLGGCIAGILWGF 334
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LGGL+ N I + YRL+ SM+LH +IH+V N+ + + +E ++GF
Sbjct: 666 PNARIFETLGGLNSNKIRNYKEYYRLVWSMFLHGSVIHMVFNLCCQIQSLWMIEPDWGFF 725
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R A LY +SG G+LLS + +VG+SGA++GL+G ++ I I N C S
Sbjct: 726 RTAGLYFVSGIFGNLLSAILDPCG---TTVGSSGAMYGLMGALIPYCIVR--ILENDCAS 780
Query: 188 LS--VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF-ILFLRPQYGYVSEKYI 243
VL ++ NL + + + +GGF +GVL GF + LR + V ++ I
Sbjct: 781 KVYIVLCDIVCGNLLIDVVIWI-----VDWVGGFIAGVLWGFGTIDLRDKNKKVKKQCI 834
>gi|325297592|ref|YP_004257509.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
gi|324317145|gb|ADY35036.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
Length = 963
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++H GIIHL++NM +L+ + LEQ G ++ YLL+G +L S H
Sbjct: 586 WRTVTCNFIHIGIIHLLMNMYALLYIGIFLEQIIGSRKLMTAYLLTGLFSALASLTAH-- 643
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS-LSVLGSVIALNLAFGFIPGVDG 209
E +S GASG++FGL G LS LI N I ++ S L +G + NL G +G
Sbjct: 644 -PETISAGASGSIFGLYGIFLSYLIFNHKIEKHQRKSLLFSIGFFVIYNLLLG--TKEEG 700
Query: 210 VDNLAHIGGFASGVLLGFILFLRPQYGYV-SEKYIA 244
+DN AHIGG SGV+LG L +Y + +YIA
Sbjct: 701 IDNAAHIGGLVSGVILGITYLLADKYSSKRASRYIA 736
>gi|327352454|gb|EGE81311.1| rhomboid family membrane protein [Ajellomyces dermatitidis ATCC
18188]
Length = 548
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 41 ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLH 100
A +QC L D+ G +KE + + + G L+ NQ +R + ++LH
Sbjct: 263 APENQCTLSDLCG------FKETH----KVPDPKPQGSLEDK--PEPNQWFRFIVPIFLH 310
Query: 101 AGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGAS 160
+G+IH+ NM + + + +E+ G+ R A +Y SG G +L + I S GAS
Sbjct: 311 SGLIHIGFNMMAQLTIGADMERTIGWWRYALVYFASGIFGFILGA--NFAPAGIASTGAS 368
Query: 161 GALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFA 220
G LFG+L +L+ W T L V+ I ++ G +P G+DN +HIGGF
Sbjct: 369 GCLFGILALAFLDLLYTWGTRPKPVTELVVMLITIGISFVLGLLP---GLDNFSHIGGFL 425
Query: 221 SGVLLGFILFLRPQ 234
G++LG + P
Sbjct: 426 VGLVLGISVLRSPD 439
>gi|156085260|ref|XP_001610112.1| rhomboid 4 [Babesia bovis]
gi|154797364|gb|EDO06544.1| rhomboid 4 [Babesia bovis]
Length = 641
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 7/161 (4%)
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GP++ +G + N + N+K+R+LS+++LHAG HL N ML+ Y +E ++GF
Sbjct: 309 GPNVRIASIIGAVSANEVRLYNEKFRILSAIFLHAGFTHLFTNCLMNMLLLYVIEPDWGF 368
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R + LYL++G GG+L +H I GASG+LFGL G + I +W +
Sbjct: 369 KRTSLLYLVAGIGGNL---VHTSMSPCIPCWGASGSLFGLYGAFIPYTIEHWDNLRSPLL 425
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
L + + +++ F F V GV AH+GGFA G+ GF
Sbjct: 426 LLLISVAFVSIEF-FSF---VRGVSKHAHLGGFAFGLCFGF 462
>gi|384251749|gb|EIE25226.1| rhomboid-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 278
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 8/159 (5%)
Query: 82 NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS 141
N V + YRLL+ +LHAGI+HL +N +L + +E G++ A +Y+LSG GS
Sbjct: 118 NEKVASGEFYRLLTCTFLHAGILHLGLNCWALYSIGPEVEGVMGYSTFAAIYVLSGLAGS 177
Query: 142 LLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAF 201
S L ++++VGASGA+FGLLG + N + + L+ + ++ALN+
Sbjct: 178 TASFLF----SDLITVGASGAIFGLLGATAGYFLRNRALQGS-TQQLTYIAGIVALNIFL 232
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
G PG +DN H+GG +GV LG+I + P++ VS+
Sbjct: 233 GASPG-SMIDNSGHLGGLFTGVALGYI--MAPKWVVVSQ 268
>gi|239607465|gb|EEQ84452.1| rhomboid family membrane protein [Ajellomyces dermatitidis ER-3]
Length = 515
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 41 ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLH 100
A +QC L D+ G +KE + + + G L+ NQ +R + ++LH
Sbjct: 259 APENQCTLSDLCG------FKETH----KVPDPKPQGSLEDK--PEPNQWFRFIVPIFLH 306
Query: 101 AGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGAS 160
+G+IH+ NM + + + +E+ G+ R A +Y SG G +L + I S GAS
Sbjct: 307 SGLIHIGFNMMAQLTIGADMERTIGWWRYALVYFASGIFGFILGA--NFAPAGIASTGAS 364
Query: 161 GALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFA 220
G LFG+L +L+ W T L V+ I ++ G +P G+DN +HIGGF
Sbjct: 365 GCLFGILALAFLDLLYTWGTRPKPVTELVVMLITIGISFVLGLLP---GLDNFSHIGGFL 421
Query: 221 SGVLLGFILFLRPQ 234
G++LG + P
Sbjct: 422 VGLVLGISVLRSPD 435
>gi|419758894|ref|ZP_14285206.1| membrane-associated serine protease [Oenococcus oeni AWRIB304]
gi|419857800|ref|ZP_14380503.1| membrane-associated serine protease [Oenococcus oeni AWRIB202]
gi|421185357|ref|ZP_15642768.1| membrane-associated serine protease [Oenococcus oeni AWRIB318]
gi|421188834|ref|ZP_15646166.1| membrane-associated serine protease [Oenococcus oeni AWRIB419]
gi|421189623|ref|ZP_15646937.1| membrane-associated serine protease [Oenococcus oeni AWRIB422]
gi|421190919|ref|ZP_15648203.1| membrane-associated serine protease [Oenococcus oeni AWRIB548]
gi|421193560|ref|ZP_15650806.1| membrane-associated serine protease [Oenococcus oeni AWRIB553]
gi|421195397|ref|ZP_15652605.1| membrane-associated serine protease [Oenococcus oeni AWRIB568]
gi|421197510|ref|ZP_15654685.1| membrane-associated serine protease [Oenococcus oeni AWRIB576]
gi|399904349|gb|EJN91805.1| membrane-associated serine protease [Oenococcus oeni AWRIB304]
gi|399964167|gb|EJN98821.1| membrane-associated serine protease [Oenococcus oeni AWRIB419]
gi|399964538|gb|EJN99179.1| membrane-associated serine protease [Oenococcus oeni AWRIB318]
gi|399971719|gb|EJO05958.1| membrane-associated serine protease [Oenococcus oeni AWRIB553]
gi|399972713|gb|EJO06912.1| membrane-associated serine protease [Oenococcus oeni AWRIB422]
gi|399973615|gb|EJO07780.1| membrane-associated serine protease [Oenococcus oeni AWRIB548]
gi|399975119|gb|EJO09187.1| membrane-associated serine protease [Oenococcus oeni AWRIB576]
gi|399975822|gb|EJO09857.1| membrane-associated serine protease [Oenococcus oeni AWRIB568]
gi|410497271|gb|EKP88746.1| membrane-associated serine protease [Oenococcus oeni AWRIB202]
Length = 241
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
++ GPSI +L LGG +LI+ K Q YRL + ++LH+ ++H+ NM +L++ +E
Sbjct: 45 NRFINGPSIQSLILLGGQVSSLIL-KGQWYRLFTPIFLHSSLMHIFSNMFTLIIFGPFVE 103
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
+ FG + +YLLSG G+LL+ + IVSVGASGALFGL G M+S W
Sbjct: 104 KLFGKTKYLLIYLLSGLWGNLLTLIFDP-NPNIVSVGASGALFGLFGAMIS---IAWFNR 159
Query: 182 ANKC--TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL-FLRPQYGYV 238
N L V ++ NL G VD AHIGG SG+L + F QYG V
Sbjct: 160 NNPIFKRQLVVFAALALFNLISNI--GDQSVDIWAHIGGLISGILTSLVCNFPSAQYGKV 217
Query: 239 SE 240
Sbjct: 218 KT 219
>gi|266621088|ref|ZP_06114023.1| rhomboid protease GluP [Clostridium hathewayi DSM 13479]
gi|288867244|gb|EFC99542.1| rhomboid protease GluP [Clostridium hathewayi DSM 13479]
Length = 206
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 93/153 (60%), Gaps = 5/153 (3%)
Query: 83 LIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSL 142
L++ + + YRL++S+++H GI H++ NM L ++ LE+ G + YL+ G G ++
Sbjct: 49 LVIERGEYYRLITSVFMHFGISHIMNNMLILFILGDNLERALGHIKYLFFYLICGVGANI 108
Query: 143 LSCLHHKGK-KEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAF 201
+S + + G+ + +VS GASGA+FG++G +L +I N + T V+ +I +L F
Sbjct: 109 VSMIVNLGEYRNVVSAGASGAIFGVIGGLLYAVIINRGRLEDLSTRQLVV--MIVCSLYF 166
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
GF GVDN AHI G G+++G +L+ +P+
Sbjct: 167 GFTS--TGVDNAAHIAGLLIGIVMGILLYRKPR 197
>gi|116490957|ref|YP_810501.1| membrane-associated serine protease [Oenococcus oeni PSU-1]
gi|290890431|ref|ZP_06553506.1| hypothetical protein AWRIB429_0896 [Oenococcus oeni AWRIB429]
gi|419859592|ref|ZP_14382246.1| membrane-associated serine protease [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|116091682|gb|ABJ56836.1| Membrane-associated serine protease [Oenococcus oeni PSU-1]
gi|290479827|gb|EFD88476.1| hypothetical protein AWRIB429_0896 [Oenococcus oeni AWRIB429]
gi|410496609|gb|EKP88092.1| membrane-associated serine protease [Oenococcus oeni DSM 20252 =
AWRIB129]
Length = 236
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
++ GPSI +L LGG +LI+ K Q YRL + ++LH+ ++H+ NM +L++ +E
Sbjct: 40 NRFINGPSIQSLILLGGQVSSLIL-KGQWYRLFTPIFLHSSLMHIFSNMFTLIIFGPFVE 98
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
+ FG + +YLLSG G+LL+ + IVSVGASGALFGL G M+S W
Sbjct: 99 KLFGKTKYLLIYLLSGLWGNLLTLIFDP-NPNIVSVGASGALFGLFGAMIS---IAWFNR 154
Query: 182 ANKC--TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL-FLRPQYGYV 238
N L V ++ NL G VD AHIGG SG+L + F QYG V
Sbjct: 155 NNPIFKRQLVVFAALALFNLISNI--GDQSVDIWAHIGGLISGILTSLVCNFPSAQYGKV 212
Query: 239 SE 240
Sbjct: 213 KT 214
>gi|156085262|ref|XP_001610113.1| rhomboid 4 [Babesia bovis]
gi|154797365|gb|EDO06545.1| rhomboid 4 [Babesia bovis]
Length = 629
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 7/161 (4%)
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
GP++ +G + N + N+K+R+LS+++LHAG HL N ML+ Y +E ++GF
Sbjct: 309 GPNVRIASIIGAVSANEVRLYNEKFRILSAIFLHAGFTHLFTNCLMNMLLLYVIEPDWGF 368
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R + LYL++G GG+L +H I GASG+LFGL G + I +W +
Sbjct: 369 KRTSLLYLVAGIGGNL---VHTSMSPCIPCWGASGSLFGLYGAFIPYTIEHWDNLRSPLL 425
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
L + + +++ F F V GV AH+GGFA G+ GF
Sbjct: 426 LLLISVAFVSIEF-FSF---VRGVSKHAHLGGFAFGLCFGF 462
>gi|449275966|gb|EMC84691.1| Rhomboid family member 1 [Columba livia]
Length = 774
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +YLLSG G+L S +
Sbjct: 570 DQFYRLWLSLFLHAGILHCLVSICFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIF 629
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 630 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 684
Query: 208 DGVDNLAHIGGFASGVLLGF 227
+DN AHI GF SG L F
Sbjct: 685 -WIDNFAHISGFISGFFLSF 703
>gi|302384591|ref|YP_003820413.1| rhomboid family protein [Clostridium saccharolyticum WM1]
gi|302195219|gb|ADL02790.1| Rhomboid family protein [Clostridium saccharolyticum WM1]
Length = 206
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 102/173 (58%), Gaps = 11/173 (6%)
Query: 67 GPSIST--LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
G +++T + + G + L++ + + +RLL+S+++H GI H++ NM L ++ LE+
Sbjct: 31 GSTVNTQFMVNHGAMYAPLVLEEGEYFRLLTSVFMHFGINHIMNNMLILFILGDNLERAL 90
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGK-KEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G + YLL G G +++S + + G + +VS GASGA+FG++G +L + N
Sbjct: 91 GHIKYLLFYLLCGVGANVISIILNLGDYRSVVSAGASGAIFGVIGGLLYAVFIN----RG 146
Query: 184 KCTSLSV--LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ LS L +IA +L FGF GVDN AHIGG G++LG +L+ +P+
Sbjct: 147 RLEDLSARQLIIMIACSLYFGFTS--TGVDNAAHIGGLFFGIVLGILLYRKPR 197
>gi|90653004|gb|ABD95905.1| RHBDG1 [Homo sapiens]
Length = 862
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/156 (36%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 88 NQKYRLLSSMWLHAG-------IIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGG 140
+Q YRL S++LHAG I+H +V++ M V LE+ G+ RIA +YLLSG G
Sbjct: 651 DQFYRLWLSLFLHAGQVTLWAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTG 710
Query: 141 SLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLA 200
+L S + + E VG +G+ FG+L + EL +W I A + L +V+
Sbjct: 711 NLASAIFLPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFT 767
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
FG +P +DN AHI GF SG+ L F +G
Sbjct: 768 FGLLP---WIDNFAHISGFISGLFLSFAFLPYISFG 800
>gi|14336678|gb|AAK61212.1|AE006462_4 unknown [Homo sapiens]
gi|119606279|gb|EAW85873.1| rhomboid 5 homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 862
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/156 (36%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 88 NQKYRLLSSMWLHAG-------IIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGG 140
+Q YRL S++LHAG I+H +V++ M V LE+ G+ RIA +YLLSG G
Sbjct: 651 DQFYRLWLSLFLHAGQVTLWAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTG 710
Query: 141 SLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLA 200
+L S + + E VG +G+ FG+L + EL +W I A + L +V+
Sbjct: 711 NLASAIFLPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFT 767
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
FG +P +DN AHI GF SG+ L F +G
Sbjct: 768 FGLLP---WIDNFAHISGFISGLFLSFAFLPYISFG 800
>gi|440913469|gb|ELR62919.1| Rhomboid family member 1 [Bos grunniens mutus]
Length = 861
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 94/191 (49%), Gaps = 31/191 (16%)
Query: 88 NQKYRLLSSMWLHAG-------IIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGG 140
+Q YRL S++LHAG ++H +V++ M V LE+ G+ RIA +YLLSG G
Sbjct: 650 DQFYRLWLSLFLHAGQVTPRGLVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTG 709
Query: 141 SLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLA 200
+L S + + E VG +G+ FG+L + EL +W I A + L +V+
Sbjct: 710 NLASAIFLPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFT 766
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQ 260
FG +P +DN AHI GF SG+ L F YI+ G K+ Y+
Sbjct: 767 FGLLP---WIDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYR 805
Query: 261 QLCWIIALILL 271
+ C II L+
Sbjct: 806 KRCQIIVFQLV 816
>gi|432868050|ref|XP_004071386.1| PREDICTED: inactive rhomboid protein 1-like [Oryzias latipes]
Length = 860
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 24/187 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +Y+LSG G+L S +
Sbjct: 656 DQFYRLWLSLFLHAGILHCLVSVVFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIF 715
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L V+ FG +P
Sbjct: 716 LPYRAE---VGPAGSQFGILACLFVELFQSWQILAEPWRAFIKLLCVVIFLFIFGLLP-- 770
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F YI+ G + Y++ C II
Sbjct: 771 -WIDNFAHISGFISGFFLSFAFL----------PYISFG--------RMDLYRKRCQIIV 811
Query: 268 LILLVLG 274
+L+ +G
Sbjct: 812 FLLVFVG 818
>gi|261200367|ref|XP_002626584.1| rhomboid family membrane protein [Ajellomyces dermatitidis
SLH14081]
gi|239593656|gb|EEQ76237.1| rhomboid family membrane protein [Ajellomyces dermatitidis
SLH14081]
Length = 516
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Query: 41 ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLH 100
A +QC L D+ G +KE + + + G L+ NQ +R + ++LH
Sbjct: 263 APENQCTLSDLCG------FKETH----KVPDPKPQGSLEDK--PEPNQWFRFIVPIFLH 310
Query: 101 AGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGAS 160
+G+IH+ NM + + + +E+ G+ R A +Y SG G +L + I S GAS
Sbjct: 311 SGLIHIGFNMMAQLTIGADMERTIGWWRYALVYFASGIFGFILGA--NFAPAGIASTGAS 368
Query: 161 GALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFA 220
G LFG+ +L+ W T L V+ I ++ G +P G+DN +HIGGF
Sbjct: 369 GCLFGIFALAFLDLLYTWGTRPKPVTELVVMLITIGISFVLGLLP---GLDNFSHIGGFL 425
Query: 221 SGVLLGFILFLRPQ 234
G++LG + P
Sbjct: 426 VGLVLGISVLRSPD 439
>gi|358061502|ref|ZP_09148156.1| hypothetical protein HMPREF9473_00218 [Clostridium hathewayi
WAL-18680]
gi|356700261|gb|EHI61767.1| hypothetical protein HMPREF9473_00218 [Clostridium hathewayi
WAL-18680]
Length = 206
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 90/159 (56%), Gaps = 5/159 (3%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G + L+ + YRLL+S+++H GI H+V NM L ++ +E+ G + YL+
Sbjct: 43 GAMYEPLVTENGEYYRLLTSIFMHFGINHIVNNMLMLFILGDNMERALGHIKYLFFYLIC 102
Query: 137 GFGGSLLSCLHHKGKKE-IVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
G G ++ S + KE +VS GASGA+FG++G +L + N + T V+ VI
Sbjct: 103 GVGANIASMTVNVMNKELVVSAGASGAIFGVIGGLLYAVAVNHGRLEDLSTRQLVV--VI 160
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+L FGF G GVDN+AHI G G+++ +L+ +P+
Sbjct: 161 LCSLYFGFTSG--GVDNVAHIAGLLIGIVMAMLLYRKPK 197
>gi|68071399|ref|XP_677613.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497796|emb|CAH98853.1| conserved hypothetical protein [Plasmodium berghei]
Length = 490
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 8/153 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
LGGL+ N I + YRL SM+LH G++H+V N+ + + + +E ++GF R L+ +
Sbjct: 178 LGGLNTNYIRNYGEIYRLFWSMYLHGGLMHIVFNVICQIQILWMIEPDWGFLRTLFLFFI 237
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG G+LLS + V++G+SG+L+GL+G + + + W C + +
Sbjct: 238 SGITGNLLSAVCDPCG---VTIGSSGSLYGLIGALFAYYVEYWKTIPRPCCVIIFM---- 290
Query: 196 ALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
L + FG G+ G DN AHIGG G+L GF
Sbjct: 291 ILVVIFGIFIGMFGYTDNYAHIGGCLGGILYGF 323
>gi|50426743|ref|XP_461969.1| DEHA2G09724p [Debaryomyces hansenii CBS767]
gi|49657639|emb|CAG90439.1| DEHA2G09724p [Debaryomyces hansenii CBS767]
Length = 610
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 15/191 (7%)
Query: 59 PWKENYLLGPSISTLRDLGGLD----RNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLM 114
P + ++ +L +L GL ++ + + +Q YR+++ M+LHAG +H++ N+ +
Sbjct: 254 PCPNSTTTDTNVCSLNELCGLSGVPIKDDVYKPHQWYRVITPMFLHAGFLHILFNLLLQV 313
Query: 115 LVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSEL 174
+ +E+ GF + A +YL+ G G LL + I S GASGALFG++ T +
Sbjct: 314 TMGASIERSIGFIKYAIIYLMCGISGFLLGA--NFSPNGIASTGASGALFGVVATNIIMF 371
Query: 175 I----ANWTIYANKCTSLSVLGSV--IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
+ N IY K L + + I ++L G +P G+DN +HIGGFA G+L+ +
Sbjct: 372 VYCGKKNTNIYGTKKYGLFIFIMIMEIVISLVLGLLP---GMDNFSHIGGFAMGILMAIL 428
Query: 229 LFLRPQYGYVS 239
L P YV
Sbjct: 429 LLPDPFLVYVD 439
>gi|331092038|ref|ZP_08340869.1| hypothetical protein HMPREF9477_01512 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402239|gb|EGG81810.1| hypothetical protein HMPREF9477_01512 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 203
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 9/178 (5%)
Query: 60 WKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYR 119
W + + S + + G + L++ ++ YRL++S++LH G HL+ NM L +
Sbjct: 23 WLSFFGMTEDGSYMLEHGAMFVPLVLGNHEYYRLITSIFLHFGFAHLMNNMVMLFFLGSI 82
Query: 120 LEQEFGFARIAPLYLLSGFGGSLLSCLHH-KGKKEIVSVGASGALFGLLGTMLSELIANW 178
LE+E G + LY +SG G++LS K + ++S GASGA+FG++G +L + N
Sbjct: 83 LEEEIGSFKYLLLYFVSGVAGNILSAFMDLKTGEFVISAGASGAIFGVIGALLIIVTKN- 141
Query: 179 TIYANKCTSLSVLGSV--IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+L G V + +L GF GVDN+AHIGG SG+LL FIL+ + Q
Sbjct: 142 ---HGHLRTLDGRGMVFMVVCSLYHGFTS--TGVDNMAHIGGLLSGILLAFILYRKRQ 194
>gi|431906772|gb|ELK10893.1| Rhomboid family member 1 [Pteropus alecto]
Length = 867
Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats.
Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 88 NQKYRLLSSMWLHAG-----------IIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
+Q YRL S++LHAG I+H +V++ M V LE+ G+ RIA +YLLS
Sbjct: 652 DQFYRLWLSLFLHAGQVTPYGLSRAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLS 711
Query: 137 GFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIA 196
G G+L S + + E VG +G+ FG+L + EL +W I A + L +V+
Sbjct: 712 GVTGNLASAIFLPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVL 768
Query: 197 LNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
FG +P +DN AHI GF SG+ L F +G
Sbjct: 769 FLFTFGLLP---WIDNFAHISGFVSGLFLSFAFLPYISFG 805
>gi|440634935|gb|ELR04854.1| hypothetical protein GMDG_07079 [Geomyces destructans 20631-21]
Length = 515
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 5/147 (3%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
NQ +R ++ M+LHAG+IH+ N+ + + +EQ G R A +YL SG G +L
Sbjct: 256 PNQWFRFITPMFLHAGLIHIGFNLLLQVTIGREMEQSIGHIRFALMYLSSGIFGFVLG-- 313
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPG 206
+ I S GASG+LFG++ ML EL+ W+ N L+ + I ++ G +P
Sbjct: 314 GNFAASGISSTGASGSLFGIIALMLLELLYTWSERPNPWRDLAFVCLDIVISFVLGLLP- 372
Query: 207 VDGVDNLAHIGGFASGVLLGFILFLRP 233
G+DN +HIGGF G+ +G + P
Sbjct: 373 --GLDNFSHIGGFLMGLAIGICILHSP 397
>gi|51860140|gb|AAU11320.1| rhomboid 4 [Toxoplasma gondii]
Length = 634
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 93/162 (57%), Gaps = 10/162 (6%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LR LGGL+ N I ++ +RL +SM++H G +H+++N++ + + + +E ++GF
Sbjct: 312 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 371
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW-TIYANKCT 186
R L+ L G G+LLS + ++VG+SG+++ LLG ++ + W +I C
Sbjct: 372 RTTLLFFLGGISGNLLSAVADPCS---ITVGSSGSMYALLGALIPYCVEYWKSIPRPGCI 428
Query: 187 SLSVLGSVIALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
+ ++ VI G + G+ G DN AH+GG G+L GF
Sbjct: 429 LVFMIVVVI-----IGILTGMAGFTDNYAHMGGALGGILWGF 465
>gi|221508525|gb|EEE34094.1| rhomboid, putative [Toxoplasma gondii VEG]
Length = 634
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 93/162 (57%), Gaps = 10/162 (6%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LR LGGL+ N I ++ +RL +SM++H G +H+++N++ + + + +E ++GF
Sbjct: 312 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 371
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW-TIYANKCT 186
R L+ L G G+LLS + ++VG+SG+++ LLG ++ + W +I C
Sbjct: 372 RTTLLFFLGGISGNLLSAVADPCS---ITVGSSGSMYALLGALIPYCVEYWKSIPRPGCI 428
Query: 187 SLSVLGSVIALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
+ ++ VI G + G+ G DN AH+GG G+L GF
Sbjct: 429 LVFMIVVVI-----IGILTGMAGFTDNYAHMGGALGGILWGF 465
>gi|221488003|gb|EEE26217.1| rhomboid-like protease 4 [Toxoplasma gondii GT1]
Length = 634
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 93/162 (57%), Gaps = 10/162 (6%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LR LGGL+ N I ++ +RL +SM++H G +H+++N++ + + + +E ++GF
Sbjct: 312 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 371
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW-TIYANKCT 186
R L+ L G G+LLS + ++VG+SG+++ LLG ++ + W +I C
Sbjct: 372 RTTLLFFLGGISGNLLSAVADPCS---ITVGSSGSMYALLGALIPYCVEYWKSIPRPGCI 428
Query: 187 SLSVLGSVIALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
+ ++ VI G + G+ G DN AH+GG G+L GF
Sbjct: 429 LVFMIVVVI-----IGILTGMAGFTDNYAHMGGALGGILWGF 465
>gi|237832509|ref|XP_002365552.1| rhomboid-like protease 4 [Toxoplasma gondii ME49]
gi|211963216|gb|EEA98411.1| rhomboid-like protease 4 [Toxoplasma gondii ME49]
Length = 664
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 91/163 (55%), Gaps = 13/163 (7%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LR LGGL+ N I ++ +RL +SM++H G +H+++N++ + + + +E ++GF
Sbjct: 343 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 402
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R L+ L G G+LLS + ++VG+SG+++ LLG ++ + W S
Sbjct: 403 RTTLLFFLGGISGNLLSAVADPCS---ITVGSSGSMYALLGALIPYCVEYW-------KS 452
Query: 188 LSVLGSVIALNLA--FGFIPGVDG-VDNLAHIGGFASGVLLGF 227
+ G ++ + G + G+ G DN AH+GG G+L GF
Sbjct: 453 IPRPGCILVFMIVVIIGILTGMAGFTDNYAHMGGALGGILWGF 495
>gi|74786304|sp|Q695T8.1|RHBL4_TOXGO RecName: Full=Rhomboid-like protease 4
gi|47500379|gb|AAT29067.1| rhomboid-like protease 4 [Toxoplasma gondii]
Length = 641
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 91/163 (55%), Gaps = 13/163 (7%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LR LGGL+ N I ++ +RL +SM++H G +H+++N++ + + + +E ++GF
Sbjct: 320 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 379
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R L+ L G G+LLS + ++VG+SG+++ LLG ++ + W S
Sbjct: 380 RTTLLFFLGGISGNLLSAVADPCS---ITVGSSGSMYALLGALIPYCVEYW-------KS 429
Query: 188 LSVLGSVIALNLA--FGFIPGVDG-VDNLAHIGGFASGVLLGF 227
+ G ++ + G + G+ G DN AH+GG G+L GF
Sbjct: 430 IPRPGCILVFMIVVIIGILTGMAGFTDNYAHMGGALGGILWGF 472
>gi|320163557|gb|EFW40456.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1087
Score = 87.8 bits (216), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH 148
Q YR +S ++LH GIIH + V ++E+ G+ R A ++ +SG GG ++S +
Sbjct: 886 QWYRFISPIFLHVGIIHFIFVAIFENSVVGQVERSAGWLRTALIFFISGIGGDIISAIFV 945
Query: 149 KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVD 208
+ +VG +GALFG LG + EL +W + L L ++ + L G +P
Sbjct: 946 PNQP---TVGGTGALFGFLGVLFVELFQSWQLCRRPVVELIKLILLVVIALVIGLLP--- 999
Query: 209 GVDNLAHIGGFASGVLLGFILF 230
VDN AHIGGF GV+ G I
Sbjct: 1000 WVDNWAHIGGFFFGVVAGIIFL 1021
>gi|421186400|ref|ZP_15643793.1| membrane-associated serine protease [Oenococcus oeni AWRIB418]
gi|399967353|gb|EJO01835.1| membrane-associated serine protease [Oenococcus oeni AWRIB418]
Length = 241
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
++ GPSI + LGG +LI+ K Q YRL + ++LH+ ++H+ NM +L++ +E
Sbjct: 45 NRFINGPSIQSSILLGGQVSSLIL-KGQWYRLFTPIFLHSSLMHIFSNMFTLIIFGPFVE 103
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
+ FG + +YLLSG G+LL+ + IVSVGASGALFGL G M+S W
Sbjct: 104 KLFGKTKYLLIYLLSGLWGNLLTLIFDP-NPNIVSVGASGALFGLFGAMIS---IAWFNR 159
Query: 182 ANKC--TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL-FLRPQYGYV 238
N L V ++ NL G VD AHIGG SG+L + F QYG V
Sbjct: 160 NNPIFKRQLVVFAALALFNLISNI--GDQSVDIWAHIGGLISGILTSLVCNFPSAQYGKV 217
Query: 239 SE 240
Sbjct: 218 KT 219
>gi|313235558|emb|CBY11013.1| unnamed protein product [Oikopleura dioica]
Length = 840
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
Query: 60 WKENYLLGPSISTLRDLGGLDRNLI-VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
W + L + L+D GL L +Q YRL S+++HAGI+HL + + M+V
Sbjct: 576 WNGDAFLCSQVDCLKDTCGLIPFLTPFVPDQIYRLHLSLFIHAGILHLCITLFFQMVVLR 635
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
LE+ G+ RIA +Y+LSG G+L S + K + VG SGA +GL+ + E I +W
Sbjct: 636 DLEKLAGWWRIASIYILSGMVGNLASAIFVPYKPD---VGPSGAQYGLIACLFVEFIQSW 692
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ ++ L + FG +P VDN AHI GF SG+LL F L
Sbjct: 693 QLLDQPWHAVLKLAVIAIFLFLFGLLP---WVDNYAHIFGFISGILLSFAL 740
>gi|393218506|gb|EJD03994.1| rhomboid-domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 528
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 13/164 (7%)
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
IS L GG+ NQ +R ++ ++LHAG IH+++NM + + VS +LE+E G
Sbjct: 290 ISELCGFGGIPSGET--PNQWFRFITPIFLHAGFIHIILNMLAQLYVSAQLEREMGTGGF 347
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCT 186
+Y +G G++L G +V SVGASGA+FG + +L A+W + T
Sbjct: 348 FLVYFAAGIFGNILG-----GNFSLVGVPSVGASGAIFGTVAVSWVDLFAHWKYHYRPST 402
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
L + + L + GFIP VDN AH+GGF G+L+G I +
Sbjct: 403 RLIYMIIELILGIGMGFIP---YVDNFAHLGGFLMGLLVGMIFY 443
>gi|150020441|ref|YP_001305795.1| rhomboid family protein [Thermosipho melanesiensis BI429]
gi|149792962|gb|ABR30410.1| Rhomboid family protein [Thermosipho melanesiensis BI429]
Length = 223
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ L L G +V Q YR++++M++H G IHLV NM +L + +E +G
Sbjct: 28 PNEVMLYLLFGAQYGPLVSSGQWYRIVTAMFVHGGFIHLVFNMYALYFLGRIVENVYGTD 87
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
+ Y +G G+L + + SVGASGA+FGL+G + + T Y K +
Sbjct: 88 KFLFFYFSTGIIGNLATQFFYYNS---FSVGASGAIFGLVGVLFAAGFRRDTPYTLKPIT 144
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
+ +I +N+ GFIPG + ++N AH+GGF SG+ LG+ + P Y Y
Sbjct: 145 GTAFLPMILVNIFLGFIPGSN-INNAAHLGGFLSGMALGYFI---PIYEY 190
>gi|401409155|ref|XP_003884026.1| Rhomboid-6, isoform A, related [Neospora caninum Liverpool]
gi|325118443|emb|CBZ53994.1| Rhomboid-6, isoform A, related [Neospora caninum Liverpool]
Length = 646
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 93/162 (57%), Gaps = 10/162 (6%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LR LGGL+ N I ++ +RL +SM++H G +H+++N++ + + + +E ++GF
Sbjct: 324 PNARILRHLGGLETNYIREYSETFRLFTSMYMHGGWMHILINLSCQIQILWIIEPDWGFW 383
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW-TIYANKCT 186
R L+ L G G+LLS + ++VG+SG+++ LLG ++ + W +I C
Sbjct: 384 RTTLLFFLGGISGNLLSAVADPCS---ITVGSSGSMYALLGALIPYCVEYWKSIPRPGCI 440
Query: 187 SLSVLGSVIALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
+ ++ VI G + G+ G DN AH+GG G+L GF
Sbjct: 441 LVFMIVVVI-----IGILTGMAGFTDNYAHMGGALGGILWGF 477
>gi|326430143|gb|EGD75713.1| hypothetical protein PTSG_07830 [Salpingoeca sp. ATCC 50818]
Length = 628
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Query: 82 NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS 141
NL NQ +RL +S+++HAG I LV+ M+ ++E + GF R +Y +SG GG+
Sbjct: 423 NLPKNPNQWFRLFTSLFIHAGAIQLVIIMSIQWYAGRQIETQAGFLRTFLVYFISGVGGT 482
Query: 142 LLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAF 201
++ + +V+ GA+ A++GLLG +L EL+ W + L L ++IA L
Sbjct: 483 TIAAIF---SPNLVTTGANPAVYGLLGCVLVELLQTWQLLEKPWLQLLKLVAIIAFLLLV 539
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
G +P +DN +H+GGFA GV+ G I+FL
Sbjct: 540 GTLP---FLDNWSHVGGFAFGVVAG-IVFL 565
>gi|170083865|ref|XP_001873156.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650708|gb|EDR14948.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 332
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 8/165 (4%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
SI T+ DL G NQ +R ++ ++LHAGIIH+++NM + + +S ++E+E G
Sbjct: 110 SICTVEDLCGFGGFHGHSPNQWFRFVTPIFLHAGIIHILLNMLAQITLSAQIEKEMGSGG 169
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKC 185
Y +G G++L G +V S+GASGA+FG + +L A+W +
Sbjct: 170 FLLTYFAAGIFGNVLG-----GNFSLVGVPSLGASGAIFGTIAVTWVDLFAHWKYHYRPV 224
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
L + + + +A G+IP +D L+HIGGF G+L+G L+
Sbjct: 225 RKLIFMTIELLIGIAVGYIPCESFIDKLSHIGGFVMGLLVGTTLY 269
>gi|444727239|gb|ELW67740.1| Inactive rhomboid protein 1 [Tupaia chinensis]
Length = 857
Score = 87.0 bits (214), Expect = 7e-15, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 32/200 (16%)
Query: 88 NQKYRLLSSMWLHAG-------------IIHLVVNMTSLMLVSYRLEQEFGFARIAPLYL 134
+Q YRL S++LHAG ++H +V++ M V LE+ G+ RIA +YL
Sbjct: 640 DQFYRLWLSLFLHAGQVTPSGLGGWSWGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYL 699
Query: 135 LSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
LSG G+L S + + E VG +G+ FG+L + EL +W + A + L +V
Sbjct: 700 LSGVTGNLASAIFLPYRAE---VGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLLAV 756
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG-YDAKHRQ 253
+ AFG +P +DN AHI GF SG+ L F YI+ G +D ++
Sbjct: 757 VLSLFAFGLLP---WIDNFAHISGFISGLFLSFAFL----------PYISFGKFDLYRKR 803
Query: 254 PKYMHYQQ--LCWIIALILL 271
+ + +Q LC + L++L
Sbjct: 804 CQIIVFQVVFLCLLAGLVVL 823
>gi|157363715|ref|YP_001470482.1| rhomboid family protein [Thermotoga lettingae TMO]
gi|157314319|gb|ABV33418.1| Rhomboid family protein [Thermotoga lettingae TMO]
Length = 228
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+V + YRL++++++H G++HL+ N +L +E +G + YL +G G++
Sbjct: 47 LVSDGEWYRLITAIFVHGGLLHLLFNSYALFYFGTIVESVYGPEKFIFSYLATGVVGNIA 106
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
+ L + +SVGASG++FGL+G + S T + K + L +I N+ +GF
Sbjct: 107 THLFYY---RAISVGASGSIFGLVGILFSLGFRRDTPFFMKQFTGYALLPMILFNIIYGF 163
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
IPG G++N AH+GGFA G+LLG++L RP Y
Sbjct: 164 IPG-SGINNAAHVGGFALGMLLGYLLSPRPAY 194
>gi|153853648|ref|ZP_01995028.1| hypothetical protein DORLON_01019 [Dorea longicatena DSM 13814]
gi|149753803|gb|EDM63734.1| peptidase, S54 family [Dorea longicatena DSM 13814]
Length = 204
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 9/157 (5%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++++ + YRL SSM+LH G HLV NM L+ + + LE + G + +Y +SG G++L
Sbjct: 48 LIQRGEYYRLFSSMFLHFGYDHLVNNMIVLVAMGWNLELDIGKVKFLIVYFVSGLAGNVL 107
Query: 144 SCLHH-KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV--IALNLA 200
S + +S GASGA+FG++G +L I N + +S G V I L L
Sbjct: 108 SAWWDIQTGSMAISAGASGAIFGIIGALLYVAIRN----RGRIGDISGRGLVFMIVLTLY 163
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
+GF G GVDN+AHIGG +G L G +L+ + + Y
Sbjct: 164 YGFTSG--GVDNMAHIGGLLAGFLSGVLLYRKRKDKY 198
>gi|444727806|gb|ELW68284.1| Inactive rhomboid protein 2 [Tupaia chinensis]
Length = 1213
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG+IH +V++ M V LE+ G+ RIA +++LSG G+L S +
Sbjct: 940 DQFYRLWLSLFLHAGVIHCLVSVVFQMTVLRDLEKLAGWHRIAIIFVLSGITGNLASAIF 999
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +V+ A G +P
Sbjct: 1000 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLHLSAVMLFLFACGLLP-- 1054
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 1055 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 1087
>gi|291561790|emb|CBL40590.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[butyrate-producing bacterium SS3/4]
Length = 206
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + YRLL++M++H GI H++ NM L ++ LE+ G + YLL G G + +
Sbjct: 49 VLEDGEYYRLLTAMFMHFGIRHIMNNMLVLFVIGDNLERALGHVKYLIFYLLCGIGSNWV 108
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
S + H VS GASGA+FG++G +L + AN + T V+ +I +L G+
Sbjct: 109 SMMAHTADTMTVSAGASGAIFGVVGGLLYVVTANRGQLEDLNTRQLVI--MIFFSLYLGY 166
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
GVDN+AH+ G G +L IL+ RP
Sbjct: 167 TS--TGVDNIAHLSGLVIGFVLAIILYHRP 194
>gi|323694355|ref|ZP_08108528.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
gi|323501595|gb|EGB17484.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
Length = 209
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query: 67 GPSIST--LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
G S++T + G + LI++ + YRLL+S+++H GI HL+ NM L ++ LE+
Sbjct: 29 GSSLNTGFMVKRGAMYAPLILQYGEYYRLLTSVFMHFGIGHLINNMLVLFVLGDNLERAL 88
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKK-EIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G + YLL G G +++S + G+ +VS GASGA+FG++G ++ + N +
Sbjct: 89 GKVKYLIFYLLCGIGANIISLAVNMGRGYYVVSAGASGAIFGVVGGLVYAVAVNRGRLED 148
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
T ++ ++A+ L GF GVDN+AH+GG G+ LG I + +P
Sbjct: 149 LSTQQLMI--LVAVTLYHGFTS--TGVDNVAHVGGLLIGIFLGMIFYRKP 194
>gi|448112251|ref|XP_004202049.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
gi|359465038|emb|CCE88743.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 7 APEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQ-PWKENYL 65
+P Q + + P+I +M N A+ A + +D+ S Q P +
Sbjct: 253 SPIQTKPYFNPMIGPSTYVMI-------NMGARYAPCMHSI-KDVTDDTSIQFPCPNSTD 304
Query: 66 LGPSISTLRDLGGL----DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
+ ++ +L L GL + + +Q YR+++ ++LHAG IH++ N+ + +E
Sbjct: 305 VKSNVCSLSQLCGLSGVPEDGSKYKPHQWYRIVTPIFLHAGFIHIIFNLLLQTTMGATIE 364
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI----AN 177
+ GF + +Y+ SG G LL + I S GASGALFG+L L I N
Sbjct: 365 RHIGFIKYFLIYMPSGIAGFLLGS--NFSPDGIASTGASGALFGILAADLIMFIYCGRKN 422
Query: 178 WTIYANKCTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
IY K L+ L + I ++ G +P G+DN +HIGGFA G+L +L P +
Sbjct: 423 TNIYGTKKFGLFLTFLVAEIIISFVLGLLP---GMDNFSHIGGFAMGILTSVVLIPDPFF 479
Query: 236 GYVSEKYIAAGYDAKHRQ 253
YV +D +Q
Sbjct: 480 IYVDGIITYNAHDNTAQQ 497
>gi|302663450|ref|XP_003023367.1| hypothetical protein TRV_02469 [Trichophyton verrucosum HKI 0517]
gi|291187361|gb|EFE42749.1| hypothetical protein TRV_02469 [Trichophyton verrucosum HKI 0517]
Length = 507
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T +C L ++ G K N G LD NQ +R +
Sbjct: 234 CPNATTTDAKCTLSELCGFDGVPNPKPN-------------GSLDDK--PEPNQWFRFIV 278
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M+LHAG++H+ N+ + + + +E+ G+ R A +Y SG G +L + I
Sbjct: 279 PMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGFVLGG--NFAAPAIA 336
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG LFG+ + +L W L+ + +A++ G +P G+DN +H
Sbjct: 337 STGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGLLP---GLDNFSH 393
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF +G++LG + P
Sbjct: 394 IGGFLTGLVLGICILRSPD 412
>gi|291190666|ref|NP_001167164.1| Rhomboid-like protease 4 [Salmo salar]
gi|223648418|gb|ACN10967.1| Rhomboid-like protease 4 [Salmo salar]
Length = 788
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 7/167 (4%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVR-KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E L ++ L D+ GL L +Q YRL S++LHAGI+H +V++ M + L
Sbjct: 557 EEATLCSQVACLDDVCGLLPFLNPEIPDQFYRLWLSLFLHAGILHCLVSVLFQMTILRDL 616
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E+ G+ RI+ +Y++SG G+L S + + E VG +G+ FG+L + EL +W I
Sbjct: 617 EKLAGWLRISIIYIVSGITGNLASAIFLPYRAE---VGPAGSQFGILACLFVELFQSWQI 673
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
+ + L V+ +FG +P +DN AHI GF SG+ L F
Sbjct: 674 LERPWRAFTKLLCVVLFLFSFGLLP---WIDNFAHISGFISGLFLSF 717
>gi|357448921|ref|XP_003594736.1| Rhomboid family member [Medicago truncatula]
gi|355483784|gb|AES64987.1| Rhomboid family member [Medicago truncatula]
Length = 190
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 12/143 (8%)
Query: 25 IMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLI 84
++F+ TM+ NNCP+ H C L +L ++SF+ K+N LL +G +
Sbjct: 60 VIFILTMYENNCPSIAP--HSC-LASLLDKFSFESIKQNPLL-------VKMGAMYFTKS 109
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
R YRL +S+WLHAG + L++NM +++ LE+++G +IA L+ +SG GGSL S
Sbjct: 110 DRLQHIYRLFTSLWLHAGAVDLLINMFNILYYGISLERKYGSVQIAILHNISGIGGSLFS 169
Query: 145 CLHHKGKKEIVSVGASGALFGLL 167
L VSVGASGA+ L+
Sbjct: 170 ALFIIPAN--VSVGASGAIMSLV 190
>gi|302497075|ref|XP_003010538.1| hypothetical protein ARB_03239 [Arthroderma benhamiae CBS 112371]
gi|291174081|gb|EFE29898.1| hypothetical protein ARB_03239 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T +C L ++ G K N G LD NQ +R +
Sbjct: 206 CPNATTTDAKCTLSELCGFDGVPNPKPN-------------GSLDDK--PEPNQWFRFIV 250
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M+LHAG++H+ N+ + + + +E+ G+ R A +Y SG G +L + I
Sbjct: 251 PMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGFVLG--GNFAAPAIA 308
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG LFG+ + +L W L+ + +A++ G +P G+DN +H
Sbjct: 309 STGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGLLP---GLDNFSH 365
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF +G++LG + P
Sbjct: 366 IGGFLTGLVLGICILRSPD 384
>gi|386284983|ref|ZP_10062202.1| hypothetical protein SULAR_07038 [Sulfurovum sp. AR]
gi|385344386|gb|EIF51103.1| hypothetical protein SULAR_07038 [Sulfurovum sp. AR]
Length = 226
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 94/189 (49%), Gaps = 8/189 (4%)
Query: 55 YSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLM 114
Y F L + L D+G L L V K + +RLL++M+LH G+ HL++NM SL
Sbjct: 22 YLFSALLSQSLSDMDMQVLVDMGALFGPLTVLKGEWWRLLTAMFLHGGMTHLLMNMFSLY 81
Query: 115 LVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSEL 174
LV E F +Y SG G L+S H V VGASGA+FG+ G +
Sbjct: 82 LVGRGAEMYFDTKSYLSIYFFSGIIGGLVSLYIHPVS---VGVGASGAIFGVFGALAGFF 138
Query: 175 IANWTIYANKCTS-LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
+A+ A+ + + +IA+NL GF + +D AHIGG G + GF+L P
Sbjct: 139 LAHREKIASHTKAFMKDFSIIIAINLVIGF--SIPSIDVSAHIGGLIVGFIGGFVLSKDP 196
Query: 234 Q--YGYVSE 240
+ +GY S
Sbjct: 197 KWIWGYSSA 205
>gi|189207869|ref|XP_001940268.1| rhomboid family membrane protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976361|gb|EDU42987.1| rhomboid family membrane protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 542
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 25/204 (12%)
Query: 36 CPAKT---ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDR--NLIVRKNQK 90
CP T AD+ +C L ++ G S P D G+ R + NQ
Sbjct: 222 CPNTTTINADAPKCTLAELCGMGSGVP---------------DQTGITRFDDHSREPNQW 266
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++LHAG+IH+ NM + +E+E G R +Y +G G +L +
Sbjct: 267 WRFITPIFLHAGLIHIGFNMLLQWTLGRDMEKEIGPLRFLLVYFSAGIFGFVLG--GNYA 324
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
+ + SVG SG+LFG+L + +L+ NW+ + L L +A+ G +P G+
Sbjct: 325 PEGLTSVGCSGSLFGILALTMLDLLYNWSTRRSPVKDLLFLLLDMAIAFVIGLLP---GL 381
Query: 211 DNLAHIGGFASGVLLGFILFLRPQ 234
DN +HIGGF G++LG + PQ
Sbjct: 382 DNFSHIGGFCMGLVLGICIIHSPQ 405
>gi|326473553|gb|EGD97562.1| rhomboid family membrane protein [Trichophyton tonsurans CBS
112818]
gi|326480224|gb|EGE04234.1| rhomboid family membrane protein [Trichophyton equinum CBS 127.97]
Length = 497
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T +C L ++ G K N G LD NQ +R +
Sbjct: 210 CPNTTTTDAKCRLSELCGFDGVPDPKPN-------------GSLDDE--PEPNQWFRFIV 254
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M+LHAG++H+ N+ + + + +E+ G+ R A +Y SG G +L + I
Sbjct: 255 PMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGFVLG--GNFAAPAIA 312
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG LFG+ + +L W L+ + +A++ G +P G+DN +H
Sbjct: 313 STGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGLLP---GLDNFSH 369
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF +G++LG + P
Sbjct: 370 IGGFLTGLVLGICILRSPD 388
>gi|327300028|ref|XP_003234707.1| rhomboid family membrane protein [Trichophyton rubrum CBS 118892]
gi|326463601|gb|EGD89054.1| rhomboid family membrane protein [Trichophyton rubrum CBS 118892]
Length = 497
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T +C L ++ G K N G LD NQ +R +
Sbjct: 210 CPNSTTTDAKCRLSELCGFDGVPDPKPN-------------GSLDDK--PEPNQWFRFIV 254
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M+LHAG++H+ N+ + + + +E+ G+ R A +Y SG G +L + I
Sbjct: 255 PMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGFVLG--GNFAAPAIA 312
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG LFG+ + +L W L+ + +A++ G +P G+DN +H
Sbjct: 313 STGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGLLP---GLDNFSH 369
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF +G++LG + P
Sbjct: 370 IGGFLTGLVLGICILRSPD 388
>gi|323486504|ref|ZP_08091827.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|355629057|ref|ZP_09050194.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
gi|323400207|gb|EGA92582.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|354819380|gb|EHF03825.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
Length = 209
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 96/170 (56%), Gaps = 7/170 (4%)
Query: 67 GPSIST--LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
G S++T + G + LI++ + YRLL+S+++H GI HL+ NM L ++ LE+
Sbjct: 29 GSSLNTGFMVKRGAMYAPLILQYGEYYRLLTSVFMHFGIGHLINNMLVLFVLGDNLERAL 88
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKK-EIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G + YLL G G +++S + G+ +VS GASGA+FG++G ++ + N +
Sbjct: 89 GKVKYLIFYLLCGIGANIISLAVNMGRGYYVVSAGASGAIFGVVGGLVYAVAVNRGRLED 148
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
T ++ ++A+ L GF GVDN AH+GG G+ LG I + +P
Sbjct: 149 LSTQQLMI--LVAVTLYHGFTS--TGVDNAAHVGGLLIGIFLGMIFYRKP 194
>gi|432843050|ref|XP_004065559.1| PREDICTED: inactive rhomboid protein 2-like [Oryzias latipes]
Length = 821
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 84/141 (59%), Gaps = 8/141 (5%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H VV++ M + LE+ G+ RI+ +Y+LSG G+L S L
Sbjct: 613 DQVYRLWLSLFLHAGLLHCVVSVVFQMTILRDLEKLAGWGRISVIYILSGITGNLASALF 672
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS-LSVLGSVIALNLAFGFIPG 206
+ E VG +G+ FGLL + ELI W I + L +LG V+ L L G +P
Sbjct: 673 LPYRAE---VGPAGSQFGLLACLFVELIQGWQILEKPWKAFLKLLGIVVFLFLC-GLLP- 727
Query: 207 VDGVDNLAHIGGFASGVLLGF 227
+DN+AHI GF SG+LL F
Sbjct: 728 --WIDNIAHIFGFLSGLLLSF 746
>gi|197302289|ref|ZP_03167348.1| hypothetical protein RUMLAC_01016 [Ruminococcus lactaris ATCC
29176]
gi|197298720|gb|EDY33261.1| peptidase, S54 family [Ruminococcus lactaris ATCC 29176]
Length = 211
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 17/180 (9%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G + +I+ + YR + M+LH GI HL+ NM L + ++LE G + +Y +S
Sbjct: 40 GAMYEPMILENQEYYRFFTCMFLHFGIQHLLNNMVMLGALGWQLEPVIGKVKYLLIYFIS 99
Query: 137 GFGGSLLS----CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
G GGS LS +H +++ VS GASGA+FGL+G +L +IAN + LS G
Sbjct: 100 GLGGSGLSFAWNVMH---EEQSVSAGASGAIFGLMGALLYVVIAN----RGRLGDLS--G 150
Query: 193 SVIALNLAFGFIPGV--DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI--AAGYD 248
+ L + G G+ GVDNLAHIGG G +L IL+ + + + ++I +AG D
Sbjct: 151 KGMMLMVLLGLYCGMTSTGVDNLAHIGGLVCGFILALILYRKKKKPAYTAEWIRQSAGDD 210
>gi|342321566|gb|EGU13499.1| Hypothetical Protein RTG_00227 [Rhodotorula glutinis ATCC 204091]
Length = 690
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 28/201 (13%)
Query: 31 MHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
+ N ++ QC + D+ G FQ + GG NQ
Sbjct: 426 LQDTNMSTLSSTDAQCTMSDVCGFGGFQ-------------IVDGTGG--------PNQS 464
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG-FGGSLLSCLHHK 149
+R ++LHAG++HL++NM + S ++E+ G R +YL +G FG L +
Sbjct: 465 FRFFVPIFLHAGVVHLLLNMLAQCTSSAQVERMMGTPRFLIVYLAAGIFGFVLGANFALV 524
Query: 150 GKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDG 209
G+ SVGASGA+FG +L +L+A+W I L L I + L G++P G
Sbjct: 525 GQP---SVGASGAIFGTHAALLVDLLAHWKIEYRPLRKLLFLVVEIIIGLGLGWVP---G 578
Query: 210 VDNLAHIGGFASGVLLGFILF 230
VDN AH+GGF G+L +LF
Sbjct: 579 VDNFAHLGGFLMGLLTSVLLF 599
>gi|260943073|ref|XP_002615835.1| hypothetical protein CLUG_04717 [Clavispora lusitaniae ATCC 42720]
gi|238851125|gb|EEQ40589.1| hypothetical protein CLUG_04717 [Clavispora lusitaniae ATCC 42720]
Length = 596
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 33/214 (15%)
Query: 36 CPAKTA-DSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLL 94
CP T+ DS C L ++ G +S +R++ G I +Q YR++
Sbjct: 238 CPNSTSSDSDVCNLSELCG----------------LSGVREVDG---EFI--PDQWYRVV 276
Query: 95 SSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEI 154
+ ++LHAG +H+ NM + + +E++ G+ + +Y+ SG G LL + I
Sbjct: 277 TPIFLHAGFLHIAFNMLLQLTMGAAVERQIGWLKFGVIYMASGIAGFLLGA--NFSPDGI 334
Query: 155 VSVGASGALFGLLGTMLSELI----ANWTIYANKCTSL--SVLGSVIALNLAFGFIPGVD 208
S GASGALFG++ T + I N +Y K L +V+ + ++ A G +P
Sbjct: 335 ASTGASGALFGIIATNMLLFIFSGRKNTNMYGTKRYGLFMAVMVFEVLVSFALGLLP--- 391
Query: 209 GVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
G+DN +HIGGF G+LL +L P + YV Y
Sbjct: 392 GLDNFSHIGGFCMGLLLSVVLLQDPSHVYVDGVY 425
>gi|348521001|ref|XP_003448015.1| PREDICTED: inactive rhomboid protein 2-like [Oreochromis niloticus]
Length = 830
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 6/140 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H VV++ M + LE+ G+ RI+ +Y+LSG G+L S L
Sbjct: 622 DQVYRLWLSLFLHAGLLHCVVSVVFQMTILRDLEKLAGWLRISIIYMLSGITGNLASALF 681
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL W + + S L ++ G +P
Sbjct: 682 LPYRAE---VGPAGSQFGLLACLFVELFQGWQMLEKPWNAFSKLSCIVLFLFLCGLLP-- 736
Query: 208 DGVDNLAHIGGFASGVLLGF 227
+DN+AHI GF SG+LL F
Sbjct: 737 -WIDNIAHIFGFLSGLLLSF 755
>gi|237841881|ref|XP_002370238.1| rhomboid-like protease 5 [Toxoplasma gondii ME49]
gi|74787537|sp|Q6GV23.1|RHBL5_TOXGO RecName: Full=Rhomboid-like protease 5; AltName: Full=Microneme
protein protease 1; Short=MPP-1
gi|48927994|gb|AAT47708.1| rhomboid-like protease 5 [Toxoplasma gondii]
gi|95007124|emb|CAJ20345.1| rhomboid-like protease 5 [Toxoplasma gondii RH]
gi|211967902|gb|EEB03098.1| rhomboid-like protease 5 [Toxoplasma gondii ME49]
gi|221482707|gb|EEE21045.1| rhomboid-like protease 5 [Toxoplasma gondii GT1]
Length = 841
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LG LD N + + +R++ M+LH G +HL++N++ + LE +GF
Sbjct: 442 PNPRVFSSLGALDTNKVRNYGEMFRVVWGMFLHGGWMHLLLNVSCQAQTLWILEPAWGFL 501
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R L+++ G GSLLS + + V+VG+SGA +GLLG ++ I W A+
Sbjct: 502 RTLSLWIVGGVSGSLLSAVANPCT---VTVGSSGAFYGLLGALVPFSIEYWDHIASPAWF 558
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAH 215
L + SV+ + FG + GV GVDN AH
Sbjct: 559 LFCV-SVLVMVAQFGNMVGVQGVDNNAH 585
>gi|116292571|gb|ABJ97617.1| rhomboid-4 [synthetic construct]
Length = 796
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
LGGL+ N I + YRL SM+LH G +H++ N+ + + + +E ++G R L+ +
Sbjct: 482 LGGLNTNYIRNYGELYRLFWSMYLHGGFMHILFNVICQIQILWMIEPDWGSIRTGLLFFI 541
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG G+LLS + V++G+SG+L+GL+G + + I W C L + V+
Sbjct: 542 SGVTGNLLSAVCDPCG---VTIGSSGSLYGLIGALFAYYIEYWKTIPRPCCVLIFMFLVV 598
Query: 196 ALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
FG I G+ G DN AHIGG GVL GF
Sbjct: 599 ----MFGIIVGMFGYTDNYAHIGGCLGGVLFGF 627
>gi|47214956|emb|CAG10778.1| unnamed protein product [Tetraodon nigroviridis]
Length = 903
Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H V + M V LE+ G+ RI+ +Y+ SG G+L S L
Sbjct: 693 DQFYRLWLSLFLHAGLLHCAVTVVFQMTVLRDLEKLAGWVRISIIYVFSGITGNLASALF 752
Query: 148 HKGKKE----IVS--VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAF 201
+ E +VS VG +G+ FGLL + EL W + + L +++
Sbjct: 753 LPYRAESTLGVVSLQVGPAGSQFGLLACLFVELFQAWQMLEKPWKAFLKLLTIVLFLFLC 812
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
G +P +DN+AHI GF SG+LL F +G S+KY
Sbjct: 813 GLLP---WMDNIAHIFGFLSGLLLSFAFLPYLTFG-TSDKY 849
>gi|403280494|ref|XP_003931752.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 828
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 624 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 683
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L ++ A G +P
Sbjct: 684 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLP-- 738
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 739 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 771
>gi|358055893|dbj|GAA98238.1| hypothetical protein E5Q_04921 [Mixia osmundae IAM 14324]
Length = 1646
Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S+ + GG D + NQ +R + +++HAG++H+ +N+ + S +E++ G R
Sbjct: 1393 SLEQICGFGGFDGKV---PNQGFRFVLPIFVHAGLVHIALNLLVQVTSSAEVERQMGSLR 1449
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKC 185
LY +G G +L G +V SVGASGA++G ++ +L+A+W + +
Sbjct: 1450 FFLLYFPAGIFGFILG-----GNFALVGLPSVGASGAIYGTHASVFVDLVAHWRLEPSPR 1504
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
L L I L G++P GVDN +HIGGFA G+ +L+
Sbjct: 1505 KKLFFLLIEIILGFGLGYVP---GVDNFSHIGGFAMGLTCSILLY 1546
>gi|358055892|dbj|GAA98237.1| hypothetical protein E5Q_04920 [Mixia osmundae IAM 14324]
Length = 1648
Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S+ + GG D + NQ +R + +++HAG++H+ +N+ + S +E++ G R
Sbjct: 1395 SLEQICGFGGFDGKV---PNQGFRFVLPIFVHAGLVHIALNLLVQVTSSAEVERQMGSLR 1451
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKC 185
LY +G G +L G +V SVGASGA++G ++ +L+A+W + +
Sbjct: 1452 FFLLYFPAGIFGFILG-----GNFALVGLPSVGASGAIYGTHASVFVDLVAHWRLEPSPR 1506
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
L L I L G++P GVDN +HIGGFA G+ +L+
Sbjct: 1507 KKLFFLLIEIILGFGLGYVP---GVDNFSHIGGFAMGLTCSILLY 1548
>gi|355716411|gb|AES05601.1| rhomboid 5-like protein 2 [Mustela putorius furo]
Length = 646
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 443 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 502
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +V+ G +P
Sbjct: 503 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFICGLLP-- 557
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 558 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 590
>gi|124506059|ref|XP_001351627.1| rhomboid protease ROM4 [Plasmodium falciparum 3D7]
gi|23504554|emb|CAD51434.1| rhomboid protease ROM4 [Plasmodium falciparum 3D7]
Length = 759
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
LGGL+ N I + YRL SM+LH G +H++ N+ + + + +E ++G R L+ +
Sbjct: 445 LGGLNTNYIRNYGELYRLFWSMYLHGGFMHILFNVICQIQILWMIEPDWGSIRTGLLFFI 504
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG G+LLS + V++G+SG+L+GL+G + + I W C L + V+
Sbjct: 505 SGVTGNLLSAVCDPCG---VTIGSSGSLYGLIGALFAYYIEYWKTIPRPCCVLIFMFLVV 561
Query: 196 ALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
FG I G+ G DN AHIGG GVL GF
Sbjct: 562 ----MFGIIVGMFGYTDNYAHIGGCLGGVLFGF 590
>gi|429327760|gb|AFZ79520.1| hypothetical protein BEWA_023690 [Babesia equi]
Length = 492
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 8/161 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ +GGL NLI + +RL+ SM+LH G +H+ N+ S + + + +E ++GF
Sbjct: 140 PNFRIFESVGGLSANLIRNYGEWFRLVWSMFLHGGWMHIAFNVCSQVQILWIVEPDWGFW 199
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R L+ +SG GG+L+S + V+VG+SGAL+GL G ++ I W +
Sbjct: 200 RTFILFFISGIGGNLMSAVLDPCG---VTVGSSGALYGLYGALIPYCIEYWNTLPHPIFI 256
Query: 188 LSVLGSVIALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
+ L +++ G + G+ G +DN AH+GG G+L GF
Sbjct: 257 IIFL----IVSIFVGLLTGLSGYIDNYAHLGGCMFGLLWGF 293
>gi|296203260|ref|XP_002748804.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Callithrix
jacchus]
Length = 828
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 624 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 683
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L ++ A G +P
Sbjct: 684 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLP-- 738
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 739 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 771
>gi|403280496|ref|XP_003931753.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 857
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 653 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 712
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L ++ A G +P
Sbjct: 713 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLP-- 767
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 768 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 800
>gi|303314767|ref|XP_003067392.1| Rhomboid family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240107060|gb|EER25247.1| Rhomboid family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320037727|gb|EFW19664.1| rhomboid family membrane protein [Coccidioides posadasii str.
Silveira]
Length = 485
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 35/209 (16%)
Query: 36 CPAKTADS-----HQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP T+ ++C L ++ G LG + R G +D NQ
Sbjct: 192 CPQSTSSDPESPDNKCTLSELCG------------LG-GVPNPRTGGSIDDK--DEPNQW 236
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG-----FGGSLLSC 145
+R + ++LHAG+IH+ VN+ + +++ +E+ G+ R A +Y SG FGG+ +
Sbjct: 237 FRFIIPIFLHAGLIHIGVNLLAQLVIGADMERSIGWWRFAIIYYASGIFGFVFGGNFAA- 295
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
I S GASG+LFG+L + +L+ W T L ++ +A++ G +P
Sbjct: 296 ------PGIASTGASGSLFGILALCVLDLLYKWNSIRRPMTYLLMMILAVAISFVLGLLP 349
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G+DN +HIGGF G+ LG L P
Sbjct: 350 ---GLDNFSHIGGFLMGLALGICLMRSPD 375
>gi|432952307|ref|XP_004085050.1| PREDICTED: inactive rhomboid protein 1-like, partial [Oryzias
latipes]
Length = 627
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVR-KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E +L ++ + D+ GL L +Q RL +++LHAGI+H +V+M M V L
Sbjct: 393 EEAILCSQVACMDDVCGLLPFLNPEVPDQFSRLWLALFLHAGILHCLVSMFFQMTVLRDL 452
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E+ G+ RI+ +Y+LSG G+L S + + E VG +G+ FG+L + EL +W I
Sbjct: 453 EKLAGWLRISIIYMLSGITGNLASAIFLPYRAE---VGPAGSQFGILACLFVELFQSWQI 509
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
+ + L ++ +FG +P +DN AHI GF SG L F +G+
Sbjct: 510 LERPWRAFAKLLAISVFFFSFGLLP---WIDNFAHICGFVSGFFLSFAFLPYISFGH 563
>gi|296203262|ref|XP_002748805.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Callithrix
jacchus]
Length = 857
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 653 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 712
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L ++ A G +P
Sbjct: 713 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLP-- 767
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 768 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 800
>gi|282851375|ref|ZP_06260740.1| peptidase, S54 (rhomboid) family protein [Lactobacillus gasseri
224-1]
gi|282557343|gb|EFB62940.1| peptidase, S54 (rhomboid) family protein [Lactobacillus gasseri
224-1]
Length = 241
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+TL LG ++ L+ ++Q +RL ++ +LH G +H+ N + V +E G
Sbjct: 36 TNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYVGQFMEPLLGHW 95
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YLLSG GG+LLS + G +VS GAS ALFGL G +++ +AN I A
Sbjct: 96 RFLSVYLLSGIGGNLLS--YAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLG 153
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
L I +NLA +D L H+GG SG LLG I
Sbjct: 154 KQALALAI-INLALDLFA--SHIDILGHLGGLISGFLLGII 191
>gi|449551010|gb|EMD41974.1| hypothetical protein CERSUDRAFT_79578 [Ceriporiopsis subvermispora
B]
Length = 460
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
+ +L D+ G NQ +R ++ ++LHAGIIH ++NM + + + ++E+E G
Sbjct: 234 VCSLEDVCGFGGFHDETPNQWFRFITPIFLHAGIIHYLLNMLAQLTATAQVEREMGSISF 293
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCT 186
LY+ SG G++L G +V SVGASGA+FG + +L A+W
Sbjct: 294 LILYMASGIFGNVLG-----GNFSLVGSPSVGASGAIFGTVAVAWVDLFAHWRYIYQPGR 348
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
L + + + +A GFIP VDN AHIGG G+L+G +L+
Sbjct: 349 KLVYMLIELVIGIAVGFIP---YVDNFAHIGGLVMGLLVGMLLY 389
>gi|330924089|ref|XP_003300510.1| hypothetical protein PTT_11758 [Pyrenophora teres f. teres 0-1]
gi|311325347|gb|EFQ91395.1| hypothetical protein PTT_11758 [Pyrenophora teres f. teres 0-1]
Length = 545
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 36 CPAKT---ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYR 92
CP T AD+ +C L + G S P + I+ D NQ +R
Sbjct: 224 CPNTTTINADTPKCTLAQLCGMGSGVPDQT------GITKFNDHSH-------EPNQWWR 270
Query: 93 LLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKK 152
++ ++LHAGIIH+ NM + +E+E G R +Y +G G +L + +
Sbjct: 271 FITPIFLHAGIIHIGFNMLLQWTLGRDMEKEIGPLRFLLVYFSAGIFGFVLG--GNYAPE 328
Query: 153 EIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDN 212
+ SVG SG+LFG+L + +L+ NW+ + L L +A+ G +P G+DN
Sbjct: 329 GLTSVGCSGSLFGILALTMLDLLYNWSTRRSPVKDLLFLLLDMAIAFVIGLLP---GLDN 385
Query: 213 LAHIGGFASGVLLGFILFLRPQ 234
+HIGGF G++LG + PQ
Sbjct: 386 FSHIGGFCMGLVLGICIIHSPQ 407
>gi|111278466|gb|ABH09088.1| putative membrane protein [Artemisia annua]
Length = 140
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 74/110 (67%), Gaps = 6/110 (5%)
Query: 166 LLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLL 225
LLG MLSEL+ NWTIYANK +L L +I +NLA G +P VDN AHIGGF +G LL
Sbjct: 1 LLGAMLSELLTNWTIYANKAAALFTLLIIILVNLAVGMLP---HVDNFAHIGGFLTGFLL 57
Query: 226 GFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLGY 275
GF+L LRPQ+ + + +A+ R KY YQ + W+++LILLV+G+
Sbjct: 58 GFVLLLRPQFAWQERHNLPV--EARSRS-KYTVYQYVFWLLSLILLVVGF 104
>gi|10438686|dbj|BAB15310.1| unnamed protein product [Homo sapiens]
Length = 619
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 415 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 474
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 475 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 529
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 530 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 562
>gi|448114817|ref|XP_004202673.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
gi|359383541|emb|CCE79457.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
Length = 524
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 98/192 (51%), Gaps = 12/192 (6%)
Query: 69 SISTLRDLGGL-DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
S+S L L G+ + + + +Q YR+++ ++LHAG IH++ N+ + +E+ G
Sbjct: 256 SLSQLCGLSGIPEADSKYKPHQWYRIITPIFLHAGFIHIIFNLLLQTTMGATIERHIGLI 315
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIYAN 183
+ +Y+ SG G LL + I S GASGALFG+L T L I N IY
Sbjct: 316 KYFLIYIPSGIAGFLLGA--NFSPDGISSTGASGALFGILATDLILFIYCGRKNTNIYGT 373
Query: 184 KCTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
K L+ L + I ++ G +P G+DN +HIGGFA G+L +L P + YV
Sbjct: 374 KKFGLFLTFLVAEIIVSFVLGLLP---GMDNFSHIGGFAMGILTSVVLIPDPFFVYVDGI 430
Query: 242 YIAAGYDAKHRQ 253
I +D +Q
Sbjct: 431 IIYNAHDNTLQQ 442
>gi|344248590|gb|EGW04694.1| Rhomboid family member 2 [Cricetulus griseus]
Length = 238
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ S++LHAGI+H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 34 DQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 93
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 94 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLP-- 148
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 149 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDKY 181
>gi|116630012|ref|YP_815184.1| membrane-associated serine protease [Lactobacillus gasseri ATCC
33323]
gi|311110357|ref|ZP_07711754.1| putative small hydrophobic molecule transporter protein
[Lactobacillus gasseri MV-22]
gi|116095594|gb|ABJ60746.1| Membrane-associated serine protease [Lactobacillus gasseri ATCC
33323]
gi|311065511|gb|EFQ45851.1| putative small hydrophobic molecule transporter protein
[Lactobacillus gasseri MV-22]
Length = 228
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+TL LG ++ L+ ++Q +RL ++ +LH G +H+ N + V +E G
Sbjct: 36 TNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYVGQFMEPLLGHW 95
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YLLSG GG+LLS + G +VS GAS ALFGL G +++ +AN I A
Sbjct: 96 RFLSVYLLSGIGGNLLS--YAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLG 153
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
L I +NLA +D L H+GG SG LLG I
Sbjct: 154 KQALALAI-INLALDLFA--SHIDILGHLGGLISGFLLGII 191
>gi|298706212|emb|CBJ29253.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 269
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I ++ Q YRLL+ + LH HL VN S V +E+ G A+ +Y L+G G++L
Sbjct: 91 ITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTLAGIAGNVL 150
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA--NKCTSLSVLGSVIALNLAF 201
SC+ + SVGASGA+FG++G + + N T+ N +L + + +N+ +
Sbjct: 151 SCIVN---PRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINVVY 207
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFIL---FLRPQYGYVSEKYI 243
G G +DN+ H+GGF G + F++ F R Y + YI
Sbjct: 208 GM--GSSQIDNMGHLGGFLGGAAMTFLIGPRFKRRLNPYTGQPYI 250
>gi|82540667|ref|XP_724634.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479343|gb|EAA16199.1| Arabidopsis thaliana F6D8.20 [Plasmodium yoelii yoelii]
Length = 659
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 85/153 (55%), Gaps = 8/153 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
LGGL+ N I + YRL SM+LH G++H++ N+ + + + +E ++GF R L+ +
Sbjct: 346 LGGLNTNYIRNYGEIYRLFWSMYLHGGLMHIIFNVICQIQILWMIEPDWGFLRTLFLFFI 405
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG G+LLS + V++G+SG+L+GL+G + + + W C + +
Sbjct: 406 SGITGNLLSAVCDPCG---VTIGSSGSLYGLIGALFAYYVEYWKTIPRPCCVIIFM---- 458
Query: 196 ALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
L + FG G+ G DN AHIGG G+L GF
Sbjct: 459 ILVVIFGIFIGMFGYTDNYAHIGGCLGGILYGF 491
>gi|408530693|emb|CCK28867.1| integral membrane protein [Streptomyces davawensis JCM 4913]
Length = 296
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + Q YRLL+SM+LH +IHL+ NM SL + LE G AR LY +SG GS L+
Sbjct: 127 VAEGQSYRLLTSMFLHGSVIHLLFNMLSLWWLGGPLEAALGRARYLALYFVSGLAGSALA 186
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L + ++GASGA+FGL G A + + + +++A+NL F F
Sbjct: 187 YL--LAEPNTATLGASGAIFGLFG-------ATAVLMRRLNYDMRPIIALLAINLIFTFS 237
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRP-------QYGYVS 239
PG + + AHIGG +GV++G+ + P QYG V+
Sbjct: 238 PGFN-ISWQAHIGGLVAGVVIGYGMVHAPRERRALIQYGTVA 278
>gi|54311162|gb|AAH35829.1| RHBDF2 protein [Homo sapiens]
Length = 649
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 445 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 504
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 505 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 559
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 560 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 592
>gi|393248033|gb|EJD55540.1| rhomboid-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 325
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
TL D+ G +Q +R ++ ++LHAGIIH+++NM + +++ ++E+E G
Sbjct: 109 TLEDICGFGGFHGKPPDQWFRFITPIFLHAGIIHILLNMFAQFMLAAQIEREMGSGGFVL 168
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
LY +G G L + G SVGASGA+FG + + +L A+W L L
Sbjct: 169 LYFAAGIFGCLGANFALIGSP---SVGASGAIFGTIAVLWVDLFAHWQFEQQPKKKLVFL 225
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ + + G+IP GVDN AH+GGF G+L I
Sbjct: 226 LIDLLIGIGLGYIP---GVDNFAHLGGFFMGLLFAIIF 260
>gi|410981852|ref|XP_003997280.1| PREDICTED: inactive rhomboid protein 2 [Felis catus]
Length = 824
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H V++ M + LE+ G+ RIA +++LSG G+L S L
Sbjct: 620 DQFYRLWLSLFLHAGVVHCFVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASALF 679
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 680 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFVCGLLP-- 734
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 735 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 767
>gi|393788564|ref|ZP_10376691.1| hypothetical protein HMPREF1068_02971 [Bacteroides nordii
CL02T12C05]
gi|392654244|gb|EIY47892.1| hypothetical protein HMPREF1068_02971 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 6/138 (4%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R L+ ++H GI+H+++NM +L+ + LE FG R+ YLL+G ++ S H
Sbjct: 84 WRTLTCNFVHIGIVHILMNMYALVYIGVLLEPMFGTRRMFAAYLLTGLCSAVSSLFWH-- 141
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
E +S GASGA+FGL G L+ L + A + LS + + NL +G +G+
Sbjct: 142 -AETISAGASGAIFGLYGIFLAFLCFHHIEKAQRNALLSSILIFVGYNLIYGL---KEGI 197
Query: 211 DNLAHIGGFASGVLLGFI 228
DN AHIGG SG +LGF+
Sbjct: 198 DNAAHIGGLISGFILGFV 215
>gi|187934985|ref|YP_001884978.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
gi|187723138|gb|ACD24359.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
Length = 321
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 97/169 (57%), Gaps = 8/169 (4%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
+L I+ L + G N ++ + + +RL++ +LH GI HL+ NM SL ++ ++E+ F
Sbjct: 160 ILTIDINVLINFGA-KYNPLIYQGEIWRLITCAFLHGGIAHLLSNMYSLYILGPQVERIF 218
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G + +Y S SLLS L ++ VSVGASGA+FGLLG +L I K
Sbjct: 219 GLKKYLCIYFTSAITSSLLSVLLNENS---VSVGASGAIFGLLGAILIFSIKERH-RIKK 274
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
L+++G +I L L GF + G+DNL HIGGF G+++G IL ++
Sbjct: 275 GYILNLVG-IIILILMSGFT--IRGIDNLGHIGGFLGGLIMGRILMIKK 320
>gi|344291132|ref|XP_003417290.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Loxodonta
africana]
Length = 827
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + ELI +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELIQSWQLLERPWKAFLNLSAIVFFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|296816012|ref|XP_002848343.1| DHHC zinc finger membrane protein [Arthroderma otae CBS 113480]
gi|238841368|gb|EEQ31030.1| DHHC zinc finger membrane protein [Arthroderma otae CBS 113480]
Length = 488
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 20 FVVCIIMFVYTMHVNN------CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTL 73
FV C+ V + NN C T + QC L D+ G F +
Sbjct: 189 FVPCM-RNVDQLQNNNQTVLFPCANSTTNDAQCRLSDLCG---FD----------GVPNP 234
Query: 74 RDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLY 133
R G +D NQ +R + M+LHAG++H+ N+ + + + +E+ G+ R A +Y
Sbjct: 235 RPHGSIDDK--PEPNQWFRFILPMFLHAGLVHIGFNLFAQLSIGADMERAIGWWRYAIVY 292
Query: 134 LLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS 193
SG G +L + I S GASG LFG+ + +L W L +
Sbjct: 293 FSSGIFGFVLG--GNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLMFMLI 350
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+A++ G +P G+DN +HIGGF +G++LG + P
Sbjct: 351 TVAISFVLGLLP---GLDNFSHIGGFLTGLVLGICVLRSPD 388
>gi|300361225|ref|ZP_07057402.1| S54 family peptidase [Lactobacillus gasseri JV-V03]
gi|300353844|gb|EFJ69715.1| S54 family peptidase [Lactobacillus gasseri JV-V03]
Length = 228
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+TL LG ++ L+ ++Q +RL ++ +LH G +H+ N + + +E G
Sbjct: 36 TNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYIGQFMEPLLGHW 95
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YLLSG GG+LLS + G +VS GAS ALFGL G +++ +AN I A
Sbjct: 96 RFLSVYLLSGIGGNLLS--YAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLG 153
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
L I +NLA +D L H+GG SG LLG I
Sbjct: 154 KQALALAI-INLALDLFA--SHIDILGHLGGLISGFLLGII 191
>gi|241859201|ref|XP_002416189.1| rhomboid, putative [Ixodes scapularis]
gi|215510403|gb|EEC19856.1| rhomboid, putative [Ixodes scapularis]
Length = 496
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 7/171 (4%)
Query: 60 WKENYLLGPSISTLRDLGGLDRNLIVR-KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
+ E L +S L D+ G+ + +Q YRL +S++LHAGI HL + + + V
Sbjct: 260 FHEEAALCSQVSCLNDVCGMIPFVNPEVPDQFYRLWTSLFLHAGIFHLCITVIVQLFVMR 319
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
LE+ G R A +Y+ SG G+L S + + E VG +GA FGLL + E+I W
Sbjct: 320 DLEKLAGPVRTAVIYMCSGVAGNLASAIFVPYRAE---VGPAGAQFGLLACLFVEVIHCW 376
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ ++L LG A+ G +P VDN AH+ GF G LL + L
Sbjct: 377 QMLRRPSSALLKLGGGAAVLFLLGLLP---WVDNYAHVFGFVFGFLLSYAL 424
>gi|71908004|ref|YP_285591.1| rhomboid-like protein [Dechloromonas aromatica RCB]
gi|71847625|gb|AAZ47121.1| Rhomboid-like protein [Dechloromonas aromatica RCB]
Length = 358
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 98/158 (62%), Gaps = 9/158 (5%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ + +RL S+++LH GI+HL++NM +L V +E+ +G R A +YL +G G+LLS
Sbjct: 58 TQDGEWWRLGSALFLHFGILHLLLNMAALWDVGQWVERMYGTLRFAVIYLTAGLTGNLLS 117
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSEL-IANWTIYANKCTSL--SVLGSVIALNLAF 201
+ + G VS GASGA+FG+ G +LS L + +I+ + L + +G A + F
Sbjct: 118 LVANAGAA--VSGGASGAIFGIYGALLSYLWLERSSIHRGEFRWLFWAAIGFSGA-TIIF 174
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
G + V G+DN AH+GG+ +GVL+G +L +R + G V+
Sbjct: 175 GLL--VPGIDNAAHVGGWIAGVLMG-VLLIRSEPGIVA 209
>gi|119175195|ref|XP_001239866.1| hypothetical protein CIMG_09487 [Coccidioides immitis RS]
gi|392870060|gb|EAS28616.2| DHHC zinc finger membrane protein [Coccidioides immitis RS]
Length = 485
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 22/178 (12%)
Query: 69 SISTLRDLGGLDR-------NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
++S L LGG+ N NQ +R + ++LHAG+IH+ VN+ + +++ +E
Sbjct: 208 TLSELCGLGGVPNPRPGGSINDKDEPNQWFRFIIPIFLHAGLIHIGVNLLAQLVIGADME 267
Query: 122 QEFGFARIAPLYLLSG-----FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
+ G+ R A +Y SG FGG+ + I S GASG+LFG+L + +L+
Sbjct: 268 RSIGWWRFAIIYYASGIFGFVFGGNFAA-------PGIASTGASGSLFGILALCVLDLLY 320
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
W T L ++ +A++ G +P G+DN +HIGGF G+ LG L P
Sbjct: 321 KWNSIRRPMTYLLMMILAVAISFVLGLLP---GLDNFSHIGGFLMGLALGICLMRSPD 375
>gi|344291130|ref|XP_003417289.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Loxodonta
africana]
Length = 860
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 656 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 715
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + ELI +W + + L +++ G +P
Sbjct: 716 LPYRAE---VGPAGSQFGLLACLFVELIQSWQLLERPWKAFLNLSAIVFFLFICGLLP-- 770
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 771 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 803
>gi|115387927|ref|XP_001211469.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195553|gb|EAU37253.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 517
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T ++ +C L ++ G N + P+++ G LD NQ +R +
Sbjct: 206 CPNSTTNALECTLSELCGF--------NGVPNPTVN-----GSLDAK--PAPNQWWRFII 250
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M+LH+GIIH+ N+ M + +E+ G+ R +Y SG G +L ++ E
Sbjct: 251 PMFLHSGIIHIGFNLLVQMTMGADMERMVGWWRYGLVYFASGIWGFVLGG-NYAAPFE-A 308
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S G SGALFG+L + +L+ W A+ L ++ + ++ G +P G+DN +H
Sbjct: 309 SCGCSGALFGILALYILDLLYTWKDRASPVVELVIMVLGVGISFVLGLLP---GLDNFSH 365
Query: 216 IGGFASGVLLGFILF-----LRPQYGYVSEKYIA 244
IGGF G+ LG L LR + G Y+A
Sbjct: 366 IGGFVMGLALGLTLMRSPNALRERIGLARAPYVA 399
>gi|336377068|gb|EGO05403.1| hypothetical protein SERLA73DRAFT_174545 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390111|gb|EGO31254.1| hypothetical protein SERLADRAFT_456141 [Serpula lacrymans var.
lacrymans S7.9]
Length = 419
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
+ +L D+ G NQ +R +++++LHAG IH+++NM + + VS ++E+E G A
Sbjct: 189 LCSLEDICGFGGFHNQTPNQWFRFITAIFLHAGFIHIILNMIAQLTVSAQIEREMGSAGF 248
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCT 186
Y +G G++L G +V S+GASGA+FG + +L A+W
Sbjct: 249 LITYFAAGIFGNVLG-----GNFSLVGAPSIGASGAIFGTVAVTWVDLFAHWKYQYRPVR 303
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
L + + L +A G+IP VDN AH+GG G+L+G L+
Sbjct: 304 KLVFMTIELILGIALGYIP---YVDNFAHLGGLCMGLLVGTTLY 344
>gi|260824301|ref|XP_002607106.1| hypothetical protein BRAFLDRAFT_68100 [Branchiostoma floridae]
gi|229292452|gb|EEN63116.1| hypothetical protein BRAFLDRAFT_68100 [Branchiostoma floridae]
Length = 1084
Score = 84.0 bits (206), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL +S++LHAG++HL++++ M + LE+ G+ RIA +Y+LSG GG+L S +
Sbjct: 875 DQFYRLWTSLFLHAGLVHLLLSVIFQMTILRDLEKLAGWGRIAIIYILSGIGGNLASAVF 934
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +GA FG++ + E+ +W + ++ L ++ + G +P
Sbjct: 935 LPYQAE---VGPAGAHFGVIACLFVEVFQSWQMLQAPWRAILKLSIIVLVLFLLGLLP-- 989
Query: 208 DGVDNLAHIGGFASGVLLGF 227
+DN AHI GF G+LL F
Sbjct: 990 -WIDNFAHITGFICGILLSF 1008
>gi|299755411|ref|XP_001828645.2| hypothetical protein CC1G_10517 [Coprinopsis cinerea okayama7#130]
gi|298411214|gb|EAU93149.2| hypothetical protein CC1G_10517 [Coprinopsis cinerea okayama7#130]
Length = 502
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 13/164 (7%)
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
T+ DL NQ +R +++++LHAGIIHL++NM + +S ++E++ G
Sbjct: 265 TVADLCSFGYKAGQEPNQWFRFITAIFLHAGIIHLLLNMLAQFTLSAQIERDMGSTGFLI 324
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+Y +G G++L G +V SVGASGA+FG L +L+A+W +
Sbjct: 325 VYFAAGIFGNVLG-----GNFSLVGIPSVGASGAIFGTLAVTWVDLLAHWKYQYRPVRKV 379
Query: 189 SVLGSVI--ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
++ I A+ +A GFIP VDN AH+GGF G+L+G I +
Sbjct: 380 GLVFMTIELAIGVAIGFIP---YVDNFAHLGGFLMGLLVGTIFY 420
>gi|290991574|ref|XP_002678410.1| predicted protein [Naegleria gruberi]
gi|284092022|gb|EFC45666.1| predicted protein [Naegleria gruberi]
Length = 365
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 7/182 (3%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRK-NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
N ++GP + G +L+ Q +R L M++H ++ L+ N+ L+ ++E
Sbjct: 137 NPMIGPKEEIVIKFGAKKNDLMKSDGTQFWRFLVFMFIHQSVLILLFNLMWLLTTVRKIE 196
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
+ R+ +Y++SG GG LLS + +++S G++ + G++ LSELI NW +
Sbjct: 197 GVWTAPRMFIIYMISGIGGGLLSSVFSF---DLISTGSTSCIVGIISASLSELILNWDVV 253
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
N SL SVI L F I + VD AHIGGF G L G +L R Q + +K
Sbjct: 254 FNPFKSLF---SVIMQLLIFFVIGLLPTVDQFAHIGGFVCGFLTGIMLCARKQKPELEKK 310
Query: 242 YI 243
++
Sbjct: 311 WV 312
>gi|325663211|ref|ZP_08151661.1| hypothetical protein HMPREF0490_02402 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470665|gb|EGC73895.1| hypothetical protein HMPREF0490_02402 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 209
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + + YRL +SM+LH G HL+ NM L ++ + LE E G + +YLLSG G+LL
Sbjct: 47 MLEEGEYYRLFTSMFLHFGFEHLMNNMFILGVIGWNLELEIGKWKYLAVYLLSGLMGNLL 106
Query: 144 SC-LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
S + + + +S GASGA+FG++G + + N N S L ++ +L G
Sbjct: 107 SAWMDIQTGEYAISAGASGAIFGVIGALFYVALRNRGRIGN--ISSRGLAFMVLCSLYLG 164
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
F GVDN AHIGG SG+LL IL+ + +Y
Sbjct: 165 FTS--KGVDNSAHIGGVISGILLAAILYHKKKY 195
>gi|295661783|ref|XP_002791446.1| DHHC zinc finger membrane protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280003|gb|EEH35569.1| DHHC zinc finger membrane protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 521
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 36 CPAKT-----ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP T A +QC L ++ G F+ K + + P + G + + NQ
Sbjct: 227 CPHTTSSDPIAPENQCPLSELCG---FR--KRHKVPDPKPN-----GSIKQK--PEPNQW 274
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R + M+LHAG++H+ NM + + + +E+ G+ R A +Y SG G +L +
Sbjct: 275 FRFIVPMFLHAGLVHIGFNMMAQLTIGADMERTIGWWRYAIVYFASGIFGFILGA--NFA 332
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
I S GASG L G+L +L W T L ++ IA++ G +P G+
Sbjct: 333 SSGIASTGASGCLSGILALACLDLFYTWGSRPKPVTELIIMLITIAISFVLGLLP---GL 389
Query: 211 DNLAHIGGFASGVLLGFILFLRPQ 234
DN +HIGGF G++LG L P
Sbjct: 390 DNFSHIGGFLVGLVLGISLLRSPD 413
>gi|149723286|ref|XP_001493344.1| PREDICTED: inactive rhomboid protein 2-like [Equus caballus]
Length = 827
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|21595108|gb|AAH31398.1| Rhbdf2 protein, partial [Mus musculus]
Length = 607
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ S++LHAGI+H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 403 DQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 462
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 463 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLP-- 517
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 518 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDKY 550
>gi|119912793|ref|XP_596084.3| PREDICTED: inactive rhomboid protein 2 [Bos taurus]
gi|297487396|ref|XP_002696211.1| PREDICTED: inactive rhomboid protein 2 [Bos taurus]
gi|296476011|tpg|DAA18126.1| TPA: rhomboid 5 homolog 2-like [Bos taurus]
Length = 825
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG+IH +V++ M + LE+ G+ RI+ +++LSG G+L S L
Sbjct: 621 DQFYRLWLSLFLHAGVIHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALF 680
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 681 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLP-- 735
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 736 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 768
>gi|397484236|ref|XP_003813283.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Pan paniscus]
Length = 856
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 712 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 767 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 799
>gi|315042361|ref|XP_003170557.1| rhomboid family membrane protein [Arthroderma gypseum CBS 118893]
gi|311345591|gb|EFR04794.1| rhomboid family membrane protein [Arthroderma gypseum CBS 118893]
Length = 498
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T +C L ++ G F + + G LD NQ +R +
Sbjct: 211 CPNTTTTEPKCRLSELCG---FD----------GVPDPKPGGSLDDK--PEPNQWFRFIV 255
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M+LHAG++H+ N+ + + + +E+ G+ R A +Y SG G +L + I
Sbjct: 256 PMFLHAGLVHIGFNLFAQLSIGADMERAIGWWRYAIVYFSSGIFGFVLG--GNFAAPAIA 313
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG LFG+ + +L W L + +A++ G +P G+DN +H
Sbjct: 314 STGASGCLFGIFALCVLDLFYTWGKKQRPWVDLMFMLITVAISFVLGLLP---GLDNFSH 370
Query: 216 IGGFASGVLLGFILF-----LRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQ 261
IGGF +G++LG + LR + G V Y++ G + + + Y+Q
Sbjct: 371 IGGFLTGLVLGICILRSPDTLRERIG-VKTPYVSMGGNVGADEDQKKFYKQ 420
>gi|160901697|ref|YP_001567278.1| rhomboid family protein [Petrotoga mobilis SJ95]
gi|160359341|gb|ABX30955.1| Rhomboid family protein [Petrotoga mobilis SJ95]
Length = 226
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + +RL++SM++H G+ H+ NM +L V +E+ +G R +Y+LSG G+LL
Sbjct: 45 LITAGEWFRLITSMFVHGGLFHIFFNMIALFYVGNIVERAYGKERFISIYMLSGIFGNLL 104
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
+ H +SVGASGA+FGL+G + + T + + + L +I +N+ +GF
Sbjct: 105 T---HLFLPNAISVGASGAIFGLIGLLFGAGFRHDTPTILRPVTGTALLPIILINVIWGF 161
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+PG + ++N AH+GG G G++ +R
Sbjct: 162 LPGAN-INNFAHLGGLGIGFTFGWLTSIR 189
>gi|116829774|ref|NP_001070906.1| inactive rhomboid protein 2 [Canis lupus familiaris]
gi|122131675|sp|Q00M95.1|RHDF2_CANFA RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2; AltName: Full=Rhomboid
veinlet-like protein 6
gi|85717756|gb|ABC74872.1| rhomboid veinlet-like 6 isoform 1 [Canis lupus familiaris]
Length = 827
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|336435773|ref|ZP_08615487.1| hypothetical protein HMPREF0988_01072 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336000268|gb|EGN30420.1| hypothetical protein HMPREF0988_01072 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 207
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 88/159 (55%), Gaps = 11/159 (6%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + YRL++SM+LH G+ HL+ NM L + + LE G R +Y+ SG GG+LL
Sbjct: 47 VLEGKEDYRLVTSMFLHFGMQHLLNNMVMLGALGWNLEAVTGKIRFILIYMFSGIGGNLL 106
Query: 144 SC-LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
S L+ +VS GASGA+FGL+G +L I N + + + + ++AL+L FG
Sbjct: 107 SLFLNRNSGVYVVSAGASGAVFGLMGALLFAAIRNRG-HVGRVSRRGLF-FMVALSLYFG 164
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFIL------FLRPQY 235
GVDN AHIGG G LL +L F R +Y
Sbjct: 165 LSS--SGVDNAAHIGGLICGFLLEAVLGEIWQIFRRSRY 201
>gi|397484234|ref|XP_003813282.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Pan paniscus]
Length = 827
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|441644013|ref|XP_003279183.2| PREDICTED: inactive rhomboid protein 2 [Nomascus leucogenys]
Length = 736
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 532 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASTIF 591
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 592 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 646
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 647 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 679
>gi|16973676|gb|AAL32367.1| C16ORF8 [Mus musculus]
Length = 856
Score = 83.6 bits (205), Expect = 8e-14, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ AFG +P
Sbjct: 712 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN A G + L F +G
Sbjct: 767 -WIDNFAQHLGLCQRLFLSFAFLPYISFG 794
>gi|93352558|ref|NP_001005498.2| inactive rhomboid protein 2 isoform 2 [Homo sapiens]
Length = 827
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|426346560|ref|XP_004040944.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Gorilla gorilla
gorilla]
Length = 827
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|198415237|ref|XP_002121328.1| PREDICTED: similar to C16ORF8, partial [Ciona intestinalis]
Length = 397
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 54 RYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRK-NQKYRLLSSMWLHAGIIHLVVNMTS 112
+Y + L ++ ++D GL + K +Q YRL + LHAGI+H +V++
Sbjct: 156 KYKHGVYHSEATLCSQVNCMQDTCGLIPFRVADKPDQIYRLWLPVMLHAGILHCLVSVVF 215
Query: 113 LMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS 172
M V +E+ G+ RI +Y+ SG G+ S + + E VG +G+ FG+L +
Sbjct: 216 QMTVLRDMEKLAGWLRIGIIYIFSGITGNFASAIFLPYRAE---VGPAGSHFGILACLFV 272
Query: 173 ELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
E++ +W + + +L L ++ + FG +P +DN AHI GF SG+LL F+L
Sbjct: 273 EVLQSWQLLKSPLRALFKLVAITTVLFVFGALP---WIDNFAHIFGFISGLLLSFVL 326
>gi|42519493|ref|NP_965423.1| hypothetical protein LJ1618 [Lactobacillus johnsonii NCC 533]
gi|385826288|ref|YP_005862630.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|417837977|ref|ZP_12484215.1| GlpG protein [Lactobacillus johnsonii pf01]
gi|41583781|gb|AAS09389.1| hypothetical protein LJ_1618 [Lactobacillus johnsonii NCC 533]
gi|329667732|gb|AEB93680.1| hypothetical protein LJP_1358c [Lactobacillus johnsonii DPC 6026]
gi|338761520|gb|EGP12789.1| GlpG protein [Lactobacillus johnsonii pf01]
Length = 228
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+TL LG ++ L+ ++Q +RL ++ +LH G +H+ N + + +E G
Sbjct: 36 TNINTLVRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYMGQFMEPLLGHW 95
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YLLSG GG+LLS + G +VS GAS ALFGL G +++ +AN I A
Sbjct: 96 RFLTVYLLSGIGGNLLS--YAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLG 153
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
L I +NLA +D L H+GG SG LLG I
Sbjct: 154 RQALALAI-INLALDLFA--SHIDILGHLGGLISGFLLGII 191
>gi|114670631|ref|XP_511699.2| PREDICTED: inactive rhomboid protein 2 isoform 6 [Pan troglodytes]
Length = 856
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 712 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 767 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 799
>gi|426346562|ref|XP_004040945.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Gorilla gorilla
gorilla]
Length = 856
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 712 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 767 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 799
>gi|395749487|ref|XP_003778952.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2 [Pongo
abelii]
Length = 833
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 629 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 688
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 689 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 743
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 744 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 776
>gi|58268562|ref|XP_571437.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227672|gb|AAW44130.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 422
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q +R + ++LH GIIHL+VNM ++VS ++E+E G +Y+L G G +L
Sbjct: 184 DQWWRFILPIFLHVGIIHLIVNMLVQIIVSAQVEREMGTIPFLIVYMLGGIYGFVLG--G 241
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ + I SVGASGALF +L +L+ +W +L + A G+IP
Sbjct: 242 NFTRTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKAFLLFLEFVIGFAMGYIP-- 299
Query: 208 DGVDNLAHIGGFASGVLLGFILF 230
+ VD LAH+GG+A G+L G IL+
Sbjct: 300 NAVDGLAHLGGWAMGILCGTILY 322
>gi|109118386|ref|XP_001104742.1| PREDICTED: rhomboid family member 2-like isoform 1 [Macaca mulatta]
Length = 827
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|301069362|ref|NP_078875.4| inactive rhomboid protein 2 isoform 1 [Homo sapiens]
gi|193806488|sp|Q6PJF5.2|RHDF2_HUMAN RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid 5 homolog 2; AltName: Full=Rhomboid family
member 2; AltName: Full=Rhomboid veinlet-like protein 5;
AltName: Full=Rhomboid veinlet-like protein 6
Length = 856
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 712 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 767 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 799
>gi|119609810|gb|EAW89404.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_d [Homo sapiens]
Length = 827
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|119609807|gb|EAW89401.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 851
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 647 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 706
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 707 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 761
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 762 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 794
>gi|45825436|gb|AAS77567.1| rhomboid veinlet-like 5 [Homo sapiens]
Length = 827
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|402901170|ref|XP_003913529.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2 [Papio
anubis]
Length = 828
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 624 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 683
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 684 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 738
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 739 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 771
>gi|335297303|ref|XP_003131221.2| PREDICTED: inactive rhomboid protein 2-like [Sus scrofa]
Length = 827
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFVLSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +V+ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFVCGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|251778447|ref|ZP_04821367.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082762|gb|EES48652.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 321
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 8/165 (4%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
+L I+ L +LG N ++ + + +RL++ +LH GI HL+ NM +L ++ ++E+ F
Sbjct: 160 ILTIDINVLLNLGA-KYNPLIYQGEVWRLVTCAFLHGGITHLLFNMYALYILGPQVEKIF 218
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G + +Y +S S L +K +SVGASGA+FGLLG +L I K
Sbjct: 219 GIKKYLIIYFVSAITSSSLGVALNKNT---ISVGASGAIFGLLGAILVFSIKQRH-KVEK 274
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
L+++G VI LNL GF + +DNL HIGGF GV++ IL
Sbjct: 275 EYILNLIG-VIILNLLIGF--NISNIDNLGHIGGFLGGVIMARIL 316
>gi|114670635|ref|XP_001152047.1| PREDICTED: inactive rhomboid protein 2 isoform 3 [Pan troglodytes]
Length = 827
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|342874669|gb|EGU76647.1| hypothetical protein FOXB_12836 [Fusarium oxysporum Fo5176]
Length = 572
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 23/201 (11%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T D C L + G G + + G D N NQ YR ++
Sbjct: 290 CPNATRDDSFCPLHVVCG------------FGGDVPDPKFNG--DINQSPEPNQWYRFIT 335
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
S+++HAG+IH++ N+ + ++ +E G R +Y+ +G G+++ + +
Sbjct: 336 SIFMHAGLIHIIFNLLLQLTIAKEMEMAIGPVRFLLVYMSAGIFGNIMGGNYAPPGQP-- 393
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSL--SVLGSVIALNLAFGFIPGVDGVDNL 213
SVGASGALFG++ +L +L+ +W N L +L VIA L G +P G+DN
Sbjct: 394 SVGASGALFGIIALVLLDLLYSWKDRRNPVKDLLFIILDMVIAFVL--GLLP---GLDNF 448
Query: 214 AHIGGFASGVLLGFILFLRPQ 234
HIGGF G+ LG + P
Sbjct: 449 VHIGGFLMGLSLGVCVLHSPN 469
>gi|355568950|gb|EHH25231.1| hypothetical protein EGK_09013 [Macaca mulatta]
gi|355754404|gb|EHH58369.1| hypothetical protein EGM_08200 [Macaca fascicularis]
Length = 856
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 712 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 767 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 799
>gi|351696488|gb|EHA99406.1| Rhomboid family member 2 [Heterocephalus glaber]
Length = 855
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 651 DQFYRLWLSLFLHAGLVHCLVSVIFQMTILRDLEKLAGWHRIAIIFVLSGITGNLASAIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 711 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFVCGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 766 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDKY 798
>gi|149054866|gb|EDM06683.1| rhomboid, veinlet-like 6 (Drosophila) (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 595
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ S++LHAGI+H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 391 DQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 450
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 451 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLP-- 505
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S++Y
Sbjct: 506 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDRY 538
>gi|301769045|ref|XP_002919912.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid family member 2-like
[Ailuropoda melanoleuca]
Length = 823
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 619 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFVLSGITGNLASAIF 678
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 679 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLP-- 733
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 734 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 766
>gi|158257764|dbj|BAF84855.1| unnamed protein product [Homo sapiens]
Length = 827
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G L S +
Sbjct: 623 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGDLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 770
>gi|109118388|ref|XP_001104817.1| PREDICTED: rhomboid family member 2-like isoform 2 [Macaca mulatta]
Length = 856
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 712 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 767 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 799
>gi|331086792|ref|ZP_08335869.1| hypothetical protein HMPREF0987_02172 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409958|gb|EGG89393.1| hypothetical protein HMPREF0987_02172 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 209
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + YRL +SM+LH G HL+ NM L ++ + LE E G + +YLLSG G+LL
Sbjct: 47 MLEDGEYYRLFTSMFLHFGFEHLMNNMFILGVIGWNLELEIGKWKYLTVYLLSGLMGNLL 106
Query: 144 SC-LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
S + + + +S GASGA+FG++G + + N N S L ++ +L G
Sbjct: 107 SAWMDIQTGEYAISAGASGAIFGVIGALFYVALRNRGRIGN--ISSRGLAFMVLCSLYLG 164
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
F GVDN AHIGG SG+LL IL+ + +Y
Sbjct: 165 FTS--KGVDNSAHIGGVISGILLAAILYHKKKY 195
>gi|226289269|gb|EEH44781.1| DHHC zinc finger membrane protein [Paracoccidioides brasiliensis
Pb18]
Length = 519
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 36 CPAKTADS-----HQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP T+ +QC L ++ G +S K + + P + G + + NQ
Sbjct: 226 CPRSTSSDPISPENQCTLSELCG-FS----KRHRVPDPKPN-----GSIKQK--PEPNQW 273
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R + M+LHAG++H+ NM + + + +E+ G+ R A +Y SG G +L +
Sbjct: 274 FRFIVPMFLHAGLVHIGFNMMAQLTIGADMERTIGWWRYAIVYFASGIFGFILGA--NFA 331
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
I S GASG L G+L +L W T L ++ IA++ G +P G+
Sbjct: 332 ASGIASTGASGCLSGILALACLDLFYTWGSRPKPVTELIIMLITIAISFVLGLLP---GL 388
Query: 211 DNLAHIGGFASGVLLGFILFLRPQ 234
DN +HIGGF G++LG L P
Sbjct: 389 DNFSHIGGFLVGLVLGISLLRSPD 412
>gi|54311128|gb|AAH16034.2| Rhomboid 5 homolog 2 (Drosophila) [Homo sapiens]
gi|158257702|dbj|BAF84824.1| unnamed protein product [Homo sapiens]
Length = 856
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 652 DQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 711
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 712 LPYRAE---VGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLP-- 766
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 767 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 799
>gi|260587072|ref|ZP_05852985.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|331082843|ref|ZP_08331965.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542562|gb|EEX23131.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|330400172|gb|EGG79821.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 220
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 91/169 (53%), Gaps = 7/169 (4%)
Query: 67 GPSISTLRDL--GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
G S+ T L GG +++ ++ YRL+SSM+LH GI HL NM L+ + LE+
Sbjct: 50 GSSLDTYHILRWGGCYTPAVLQSHEYYRLISSMFLHFGIQHLGNNMLVLLFLGDCLERNI 109
Query: 125 GFARIAPLYLLSGFGGSLLSC-LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G + +Y L G G ++LS L K K +S GASGA+F ++G ++ +IAN N
Sbjct: 110 GKIKYLLIYFLGGIGANVLSIYLEIKNGKYFISAGASGAVFAVIGALIYIVIANRGRIEN 169
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
T ++ + L+L FG GVDN AH GG SG +L + + R
Sbjct: 170 FTTRQLIV--MAGLSLYFGMTS--TGVDNAAHFGGLISGFILAVLCYRR 214
>gi|432098908|gb|ELK28398.1| Inactive rhomboid protein 1 [Myotis davidii]
Length = 492
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVR-KNQKYRLLSSMWLHAG-----------IIHLVVN 109
E L + + D+ GL L +Q YRL S++LHAG I+H +V+
Sbjct: 250 EEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGQVTPDGPRRVGILHCLVS 309
Query: 110 MTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGT 169
+ M V LE+ G+ RIA +YLLSG G+L S + + E VG +G+ FG+L
Sbjct: 310 VCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFLPYRAE---VGPAGSQFGILAC 366
Query: 170 MLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
+ EL +W I A + L +V+ FG +P +DN AHI GF SG+ L F
Sbjct: 367 LFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP---WIDNFAHISGFISGLFLSF 421
>gi|359414482|ref|ZP_09206947.1| Rhomboid family protein [Clostridium sp. DL-VIII]
gi|357173366|gb|EHJ01541.1| Rhomboid family protein [Clostridium sp. DL-VIII]
Length = 332
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N+++ + +RLL+ +LH+G+IH+V NM SL ++ ++EQ +G + +YL+S
Sbjct: 177 GAKINILIDHGEIWRLLTCAFLHSGLIHIVCNMYSLYIIGPQIEQIYGIRKYLIIYLISC 236
Query: 138 FGGSLLS-CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIA 196
S+ S L+ G +++GASG +FGL+G +L+ + K LS L +IA
Sbjct: 237 ITASISSYFLNPNG----IAIGASGGIFGLMGALLAFALIERNRIQKKF--LSSLLQIIA 290
Query: 197 LNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
+NL G + +DN AHIGG G++ G+I ++
Sbjct: 291 INLFIGL--SIKNIDNFAHIGGLVGGIVSGYISYI 323
>gi|345564498|gb|EGX47460.1| hypothetical protein AOL_s00083g396 [Arthrobotrys oligospora ATCC
24927]
Length = 482
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q +R + M++HAG+IH+ N+ + + +E+E G R A +Y+ SG G +L
Sbjct: 233 DQWWRFILPMFMHAGLIHIAFNLLIQLRLGTDMEREIGIIRFAIVYISSGIFGFVLG--G 290
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ + + S GASGALFG+L +L +L W + L L A++ G +P
Sbjct: 291 NFAPQGLASTGASGALFGILALVLLDLFYTWKQRESPVKDLIFLIIDFAISFVLGLLP-- 348
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRP 233
GVDN AHIGGF G+ LG P
Sbjct: 349 -GVDNFAHIGGFLMGLALGLAFMRSP 373
>gi|26324818|dbj|BAC26163.1| unnamed protein product [Mus musculus]
Length = 827
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ S++LHAGI+H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 623 DQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVPFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDKY 770
>gi|350636534|gb|EHA24894.1| hypothetical protein ASPNIDRAFT_129525 [Aspergillus niger ATCC
1015]
Length = 891
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP TA +C L + G +S P + G LD NQ +R +
Sbjct: 125 CPNATASVAECTLSEACG-FSGVPNPHPH------------GSLDDK--PEPNQWFRFII 169
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M++H G +H+ N+ M + +E+ G+ R +Y+ SG G +L ++ G+ E
Sbjct: 170 PMFIHTGFVHIGFNLIVQMTMGVDMERMIGWWRYFVVYVASGIWGFVLGG-NYAGQGE-A 227
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S G SGALFG+L + +L+ W + + ++ IA++ G +P G+DN AH
Sbjct: 228 SCGCSGALFGILALFILDLLYTWKDRPSPWVEMIIMILGIAVSFVLGLLP---GLDNFAH 284
Query: 216 IGGFASGVLLGFILF-----LRPQYGYVSEKYIAAGYDAKHRQPK 255
IGGF G+ LG L LR + G Y+A A P
Sbjct: 285 IGGFIMGLALGLCLLRSPNALRERIGLARNPYVAMSGGAGTPTPD 329
>gi|47226109|emb|CAG04483.1| unnamed protein product [Tetraodon nigroviridis]
Length = 626
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVR-KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E L ++ + D+ GL L +Q RL S++LHAG++H +V++ M V +
Sbjct: 395 EEATLCSQVACMDDICGLLPFLNPEVPDQFSRLWLSLFLHAGVLHCLVSVVFQMTVLRDI 454
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E+ G+ R++ +Y+LSG G+L S + + E VG +G+ FG+L + EL +W I
Sbjct: 455 EKLVGWLRVSIIYMLSGITGNLASAIFLPYRAE---VGPAGSQFGILACLFVELFQSWPI 511
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
+ + L ++ +FG +P +DN AHI GF SG L F
Sbjct: 512 LERPWRAFAKLLAISTFFFSFGLLP---WIDNFAHICGFVSGFFLSF 555
>gi|440895146|gb|ELR47408.1| Rhomboid family member 2 [Bos grunniens mutus]
Length = 846
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG+IH +V++ M + LE+ G+ RI+ +++LSG G+L S L
Sbjct: 642 DQFYRLWLSLFLHAGVIHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALF 701
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 702 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLP-- 756
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 757 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 789
>gi|392426192|ref|YP_006467186.1| putative membrane protein [Desulfosporosinus acidiphilus SJ4]
gi|391356155|gb|AFM41854.1| putative membrane protein [Desulfosporosinus acidiphilus SJ4]
Length = 322
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 20/170 (11%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N +++ Q +RLL+SM++H G HL N+ +L + E +G + +Y+LSG
Sbjct: 165 GAKVNSLIQAGQVWRLLTSMFIHIGYFHLAFNLYALWALGPLTELSYGHGKYFAIYMLSG 224
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS---- 193
GG++ S L +S GASGA+ GLLG L + IY S LG
Sbjct: 225 LGGAMASFLF----SPFLSAGASGAIMGLLGAQL------FFIYKRPYLWKSGLGMNLVI 274
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL----FLRPQYGYVS 239
VI +NL FGF G+DN AH+GG +G+ +G +L F++P+ +S
Sbjct: 275 VILVNLGFGFWQ--PGIDNFAHLGGLFTGMFMGALLSWKNFIKPKSAKLS 322
>gi|322693699|gb|EFY85550.1| Rhomboid family protein [Metarhizium acridum CQMa 102]
Length = 500
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 80 DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFG 139
+ N + NQ +R + ++LHAG+IH+ NM M ++ +EQ G R +YL +G
Sbjct: 264 NANQSPQPNQWFRFIVPIFLHAGLIHIGFNMLLQMTLAKEMEQAIGSVRFFLVYLSAGIF 323
Query: 140 GSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNL 199
G ++ + I S GASG+LFG++ L +L +WT N L + I ++
Sbjct: 324 GFVMGG--NFAAPGIASTGASGSLFGVIALTLLDLFYSWTERRNPVKDLMFIILDIVISF 381
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY------GYVSEKYIAAGYDAKHRQ 253
G +P G+DN +HIGGF G+ LG L P G S Y A
Sbjct: 382 VLGLLP---GLDNFSHIGGFLMGLALGVCLLHSPNALRRKIDGSDSTSYSAVNTSGDDTA 438
Query: 254 PKYM 257
P ++
Sbjct: 439 PGFL 442
>gi|302911024|ref|XP_003050402.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
gi|256731339|gb|EEU44689.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
Length = 569
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 19/199 (9%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T + C L+ + G G ++ + G +D++ + NQ +R ++
Sbjct: 293 CPNATKNDTLCSLKTVCG------------FGGTVPNPKFNGDIDQS--PQPNQWFRFIT 338
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
S++LHAG++H++ N+ + + +E+ G R +Y+ +G G+++ +
Sbjct: 339 SIFLHAGVVHILFNLLVQLTIGKDMERAIGPVRFLLVYISAGIFGNIMGGNY--APPGYA 396
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S+GASGA+FG++ L +L+ +W + L + +A+ G +P G+DN AH
Sbjct: 397 SMGASGAIFGIIALTLLDLLYSWKDRKSPVKDLLFIFLDMAIAFVLGLLP---GLDNFAH 453
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF G+ LG + P
Sbjct: 454 IGGFLMGLSLGVCVLHSPN 472
>gi|154505636|ref|ZP_02042374.1| hypothetical protein RUMGNA_03175 [Ruminococcus gnavus ATCC 29149]
gi|336431736|ref|ZP_08611578.1| hypothetical protein HMPREF0991_00697 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153794075|gb|EDN76495.1| putative rhomboid protease GluP [Ruminococcus gnavus ATCC 29149]
gi|336019755|gb|EGN49477.1| hypothetical protein HMPREF0991_00697 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 200
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Query: 83 LIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSL 142
LI Q YRL++ ++LH GI HL+ NM L + + LE+E G + +Y +SG G +L
Sbjct: 46 LIFEDAQYYRLITCIFLHFGIDHLMNNMVMLGALGWNLEKEIGSFKFLLIYFVSGIGANL 105
Query: 143 LS-CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS----VIAL 197
+S + VS GASGA+FGLLG +L W + N+ + + G ++ L
Sbjct: 106 ISLAMDFYTGNLAVSAGASGAIFGLLGALL------WVVIRNRGKAGRLTGRGMLFMVLL 159
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
+L FGF GVDN AH+GG G L +L+
Sbjct: 160 SLYFGFTS--TGVDNAAHVGGLICGFLTAVLLY 190
>gi|373471259|ref|ZP_09562320.1| peptidase, S54 family [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371760666|gb|EHO49340.1| peptidase, S54 family [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 210
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 5/151 (3%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
++ + YRL++SM++H GI H+ NM L+L+ +LE G + +Y+LSG +L S
Sbjct: 50 IKGGEYYRLITSMFMHFGIEHIANNMLILVLLGGKLEDIMGHFKFFIIYMLSGILANLAS 109
Query: 145 CLHHKGKKEI-VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
+ VS GASGA+FG++G +L+ L+ + K +LS+ V++L L
Sbjct: 110 DWAQTMTGDFAVSAGASGAIFGVVGALLASLV----LSKGKIKNLSLYQIVVSLGLMLYA 165
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
GVDN+AH+GG SGV +G IL+ +
Sbjct: 166 GFKTTGVDNIAHVGGAVSGVFIGLILYKEDK 196
>gi|134112822|ref|XP_774954.1| hypothetical protein CNBF1190 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257602|gb|EAL20307.1| hypothetical protein CNBF1190 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 532
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q +R + ++LH GIIHL+VNM ++VS ++E+E G +Y+L G G +L
Sbjct: 313 DQWWRFILPIFLHVGIIHLIVNMLVQIIVSAQVEREMGTIPFLIVYMLGGIYGFVLG--G 370
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ + I SVGASGALF +L +L+ +W +L + A G+IP
Sbjct: 371 NFTRTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKAFLLFLEFVIGFAMGYIP-- 428
Query: 208 DGVDNLAHIGGFASGVLLGFILF 230
+ VD LAH+GG+A G+L G IL+
Sbjct: 429 NAVDGLAHLGGWAMGILCGTILY 451
>gi|358374890|dbj|GAA91478.1| rhomboid family membrane protein [Aspergillus kawachii IFO 4308]
Length = 516
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 35 NCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLL 94
+CP T + +C L + G +S + G LD NQ +R +
Sbjct: 205 SCPNATTSATECTLSEACG-FS------------GVPNPHPHGSLDD--TPAPNQWFRFI 249
Query: 95 SSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEI 154
M++H G IH+ N+ + + +E+ G+ R +Y+ SG G +L ++ G+ E
Sbjct: 250 IPMFIHTGFIHIGFNLIVQLTMGVDMERMIGWWRYFLVYVASGIWGFVLGG-NYAGQGE- 307
Query: 155 VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLA 214
S G SGALFG+L + +L+ W A+ L ++ IA++ G +P G+DN A
Sbjct: 308 ASCGCSGALFGILALFILDLLYTWKDRASPWVELIIMILGIAVSFVLGLLP---GLDNFA 364
Query: 215 HIGGFASGVLLGFILF-----LRPQYGYVSEKYIAAGYDAKHRQPK 255
HIGGF G+ LG L LR + G Y+A A P
Sbjct: 365 HIGGFIMGLALGLCLLRSPNALRERIGLARNPYVAMSGGAGTPTPD 410
>gi|166033079|ref|ZP_02235908.1| hypothetical protein DORFOR_02801 [Dorea formicigenerans ATCC
27755]
gi|166027436|gb|EDR46193.1| peptidase, S54 family [Dorea formicigenerans ATCC 27755]
Length = 199
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + Y L++SM+LH G HL+ NM L+++ Y LE E G R +YL SG G+L+
Sbjct: 48 LMNGERYYTLITSMFLHFGFSHLMNNMVMLLVIGYSLEPEIGKIRFLLIYLGSGLMGNLV 107
Query: 144 SCLHHKGKKE-IVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI--ALNLA 200
S + VS GASGA+FG++G +L I N + +S G V+ L+L
Sbjct: 108 SAWFDVSQGSYAVSAGASGAIFGIVGALLYVAIRN----HGRVGEISTRGLVLMAGLSLY 163
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+GF GVDN AHIGG SG LL + + + +
Sbjct: 164 YGFTA--QGVDNAAHIGGLVSGFLLAVLTYWKHK 195
>gi|145251413|ref|XP_001397220.1| DHHC zinc finger membrane protein [Aspergillus niger CBS 513.88]
gi|134082753|emb|CAK46736.1| unnamed protein product [Aspergillus niger]
Length = 513
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 25/225 (11%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP TA +C L + G +S + G LD NQ +R +
Sbjct: 206 CPNATASVAECTLSEACG-FS------------GVPNPHPHGSLDDK--PEPNQWFRFII 250
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M++H G +H+ N+ M + +E+ G+ R +Y+ SG G +L ++ G+ E
Sbjct: 251 PMFIHTGFVHIGFNLIVQMTMGVDMERMIGWWRYFVVYVASGIWGFVLGG-NYAGQGE-A 308
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S G SGALFG+L + +L+ W + + ++ IA++ G +P G+DN AH
Sbjct: 309 SCGCSGALFGILALFILDLLYTWKDRPSPWVEMIIMILGIAVSFVLGLLP---GLDNFAH 365
Query: 216 IGGFASGVLLGFILF-----LRPQYGYVSEKYIAAGYDAKHRQPK 255
IGGF G+ LG L LR + G Y+A A P
Sbjct: 366 IGGFIMGLALGLCLLRSPNALRERIGLARNPYVAMSGGAGTPTPD 410
>gi|94968908|ref|YP_590956.1| rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
gi|94550958|gb|ABF40882.1| Rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 365
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 9/155 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + +R+L+SM+LH GI+H++VNM +L + Y E +G +Y+LSG
Sbjct: 94 GADYGPATASGEWWRMLTSMFLHGGILHILVNMFALRNLGYTAELFYGRKNFLIIYMLSG 153
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC---TSLSVLGSV 194
FGGS + L + + VSVGASGA+FG+ G L+ ++ + ++ + +G+V
Sbjct: 154 FGGSAATLLW---RPDSVSVGASGAIFGVAGA-LAAMVYFKKLPVDRALLKRDIGSIGAV 209
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
I NL G + ++N AH+GG +G +LGF L
Sbjct: 210 IFYNLLIG--AALPIINNAAHVGGLVAGAILGFTL 242
>gi|431908742|gb|ELK12334.1| Rhomboid family member 2 [Pteropus alecto]
Length = 847
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H V++ M V LE+ G+ RI+ +++LSG G+L S +
Sbjct: 643 DQFYRLWLSLFLHAGVVHCFVSIIFQMTVLRDLEKLAGWHRISIIFILSGITGNLASAIF 702
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 703 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFVCGLLP-- 757
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 758 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDKY 790
>gi|188589117|ref|YP_001920138.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
gi|188499398|gb|ACD52534.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 321
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 8/165 (4%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
+L I+ L + G N ++ + + +RL++ +LH GI HL+ NM +L ++ ++E+ F
Sbjct: 160 ILTIDINVLLNFGA-KYNPLIYQGEVWRLVACAFLHGGITHLLFNMYALYILGPQVEKIF 218
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G + +Y +S S L +K +SVGASGA+FGLLG +L I K
Sbjct: 219 GIKKYLIIYFVSAITSSSLGVALNKNT---ISVGASGAIFGLLGAILVFSIKQRH-KVEK 274
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
L++LG VI LNL GF + +DNL HIGGF G+++ IL
Sbjct: 275 EYILNLLG-VIILNLLIGF--NISNIDNLGHIGGFLGGIIMARIL 316
>gi|403331557|gb|EJY64731.1| Rhomboid family protein [Oxytricha trifallax]
Length = 278
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 27 FVYTMHVNNCPAKTADSHQCVLRDI-----LGRYSFQPWKENYLLGPSISTLRDLGGLDR 81
F T+H CP T V+ + + +++ N LL P L D G
Sbjct: 28 FTETIHNVMCPFLTVRQFIFVISIVQCGVYIASVAYKGISNNGLLAPQSEALFDFGQKYP 87
Query: 82 NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS 141
+ + Q +R + ++LHA +HL N+ S + LE GF LY LSG GG
Sbjct: 88 YYMRYQYQVWRFIMPIFLHADFVHLTSNIFSQFVFGSYLESTIGFFNFTILYFLSGIGGI 147
Query: 142 LLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAF 201
L S L + SVGAS A+FGL+G+ + LI NW + + + + L
Sbjct: 148 LFSSL----ASDATSVGASTAIFGLMGSFAAYLIVNWKNLERQPQQKYTIAIFLIIGLLM 203
Query: 202 GFIPGVDG--VDNLAHIGGFASGVLLGFIL 229
+D++ H+GGF +G++L L
Sbjct: 204 NLTQAQSNSKIDSIGHLGGFLTGLILSLFL 233
>gi|82703577|ref|YP_413143.1| rhomboid-like protein [Nitrosospira multiformis ATCC 25196]
gi|82411642|gb|ABB75751.1| Rhomboid-like protein [Nitrosospira multiformis ATCC 25196]
Length = 371
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 86/160 (53%), Gaps = 23/160 (14%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ + +RL ++M+LH G++HL +N+ +L +E+ +G AR LY SG G+LLS
Sbjct: 58 TQDGEWWRLGTAMFLHFGLVHLTLNLWALWDAGQLVERMYGHARFTALYFASGLAGNLLS 117
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIAN----------WTIYANKCTSLSVLGSV 194
+ HKG +S GASGA+FGL G +L L W + ++ LG
Sbjct: 118 LVAHKGLA--ISGGASGAIFGLYGALLVFLWRERGRLHPHEFRWFFWGATAFAIVSLG-- 173
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
L LA + G+DN AHIGGF +G LLG I+F P+
Sbjct: 174 --LGLA------ITGIDNAAHIGGFVTG-LLGGIVFANPR 204
>gi|395825880|ref|XP_003786148.1| PREDICTED: inactive rhomboid protein 2 [Otolemur garnettii]
Length = 829
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 625 DQFYRLWLSLFLHAGVVHCFVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 684
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 685 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLP-- 739
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 740 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 772
>gi|225682090|gb|EEH20374.1| rhomboid family membrane protein [Paracoccidioides brasiliensis
Pb03]
Length = 735
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
NQ +R + M+LHAG++H+ NM + + + +E+ G+ R A +Y SG G +L
Sbjct: 530 EPNQWFRFIVPMFLHAGLVHIGFNMMAQLTIGADMERTIGWWRYAIVYFASGIFGFILGA 589
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ I S GASG L G+L +L W T L ++ IA++ G +P
Sbjct: 590 --NFAASGIASTGASGCLSGILALACLDLFYTWGSRPKPVTELIIMLITIAISFVLGLLP 647
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G+DN +HIGGF G++LG L P
Sbjct: 648 ---GLDNFSHIGGFLVGLVLGISLLRSPD 673
>gi|148234897|ref|NP_001090673.1| inactive rhomboid protein 2 [Xenopus (Silurana) tropicalis]
gi|193806414|sp|A0JPA1.1|RHDF2_XENTR RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2
gi|117558553|gb|AAI27322.1| rhbdf2 protein [Xenopus (Silurana) tropicalis]
Length = 826
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG+IH V++ M V LE+ G+ RI+ +Y+LSG G+L S L
Sbjct: 622 DQFYRLWLSLFLHAGVIHCCVSVVFQMTVLRDLEKLAGWLRISIIYILSGITGNLASALF 681
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W I A + L ++ FG +P
Sbjct: 682 LPYRAE---VGPAGSQFGLLACLFVELFQSWQILAKPWKAFLKLLGIVLFLFLFGLLP-- 736
Query: 208 DGVDNLAHIGGFASGVLLGF 227
+DN+AHI GF SG+LL F
Sbjct: 737 -WIDNIAHIFGFLSGLLLSF 755
>gi|357580551|sp|C8VCL5.1|Y0929_EMENI RecName: Full=Uncharacterized rhomboid protein AN10929
gi|259483309|tpe|CBF78591.1| TPA: rhomboid family membrane protein (AFU_orthologue;
AFUA_2G16490) [Aspergillus nidulans FGSC A4]
Length = 503
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T C L ++ G F + G LD +Q +R +
Sbjct: 212 CPNATTTDSDCSLSELCG---FD----------GVPNPHPGGSLDDK--PAPDQWFRFII 256
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M+LH+G +H+ N+ M + +E+ G+ R +YL SG G +L ++ G+ E
Sbjct: 257 PMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSSGIWGFVLGG-NYAGQGE-A 314
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S G SGALFG+L + +L+ W N L ++ IA++ G +P G+DN +H
Sbjct: 315 SCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVSFVLGLLP---GLDNFSH 371
Query: 216 IGGFASGVLLGFILF-----LRPQYGYVSEKYIA--AGYDAKHRQPK 255
+GGF G+ LG + LR + G Y+A G A++ P
Sbjct: 372 LGGFTMGLALGLCVMRSPNALRERIGLARSPYVAMSGGVAAENADPD 418
>gi|410657229|ref|YP_006909600.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|410660265|ref|YP_006912636.1| Rhomboid-like protein [Dehalobacter sp. CF]
gi|409019584|gb|AFV01615.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|409022621|gb|AFV04651.1| Rhomboid-like protein [Dehalobacter sp. CF]
Length = 203
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 15/161 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ Q +RLL+SM++H G HL+ N+ +L+++ E+ FG R +YL SG
Sbjct: 49 GAKMNTLIDAGQYWRLLTSMFIHIGFTHLLFNVYALIVLGKLAERLFGHGRFLLIYLFSG 108
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML---SELIANWTIYANKCTSLSVLGSV 194
GSL+S L G + +S GASGA+FGLLG ++ A W + ++ L V
Sbjct: 109 LAGSLISYLW--GPE--LSAGASGAIFGLLGAIIIYGCRKPAFW-----RTGLITNLAIV 159
Query: 195 IALNLAFGFIPGVDGVDNLAHIGG-FASGVLLGFILFLRPQ 234
+ +NL FG + G+DN AH+GG F V +LFL+ Q
Sbjct: 160 LGINLVFGVV--FSGIDNFAHLGGLFGGAVSSALLLFLQRQ 198
>gi|315652544|ref|ZP_07905527.1| rhomboid family protein [Lachnoanaerobaculum saburreum DSM 3986]
gi|419718196|ref|ZP_14245528.1| peptidase, S54 family [Lachnoanaerobaculum saburreum F0468]
gi|315485201|gb|EFU75600.1| rhomboid family protein [Lachnoanaerobaculum saburreum DSM 3986]
gi|383305641|gb|EIC96994.1| peptidase, S54 family [Lachnoanaerobaculum saburreum F0468]
Length = 205
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 85/147 (57%), Gaps = 5/147 (3%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
++ + YRL +SM++H GI H+V NM L+L+ +LE G + +Y+LSG ++ S
Sbjct: 50 IKNGEYYRLATSMFMHFGIEHIVNNMLILVLLGGKLEDIMGHFKFFIIYMLSGILANIAS 109
Query: 145 CLHHKGKKEI-VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
L + VS GASGA+FG++G +L+ L+ + K +L++ ++L L
Sbjct: 110 DLAQTMTGDFAVSAGASGAIFGVVGALLASLV----LSKGKIKNLNLYQIAVSLGLMLYA 165
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILF 230
GVDN+AH+GG SGV +G IL+
Sbjct: 166 GFKTTGVDNIAHVGGAVSGVFIGLILY 192
>gi|426238434|ref|XP_004013158.1| PREDICTED: inactive rhomboid protein 2 [Ovis aries]
Length = 825
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RI+ +++LSG G+L S L
Sbjct: 621 DQFYRLWLSLFLHAGVVHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALF 680
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W + + L +++ G +P
Sbjct: 681 LPYRAE---VGPAGSQFGILACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLP-- 735
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 736 -WIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDKY 768
>gi|67608816|ref|XP_666907.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657985|gb|EAL36682.1| hypothetical protein Chro.60098 [Cryptosporidium hominis]
Length = 985
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 22/226 (9%)
Query: 10 QWRAWLTPV---IFVVCIIMF----VYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKE 62
++R W+ P+ IFVV F V+ + D+ C G + +
Sbjct: 550 KFRKWVNPIHGRIFVVLTTSFALVGVFFQSLIYNRLNKWDNGNC------GGVYVESFSM 603
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
N +LGP TL LGGL N + R+ + R+ +MW+H G IH+ N+ S + Y +E
Sbjct: 604 NSMLGPCSKTLSALGGLVVNEL-RQGEMIRMFWAMWMHTGFIHIGFNVISQAQLGYMIEP 662
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
++G R L+ LSG GG+L + ++VG+SG LFG+ + NW
Sbjct: 663 DWGILRFFLLFFLSGVGGNLAVAVISPCS---LTVGSSGGLFGITAASIPYTFENW---- 715
Query: 183 NKCTSLSVLGSVIALNLAFGFIPGVDGVDN-LAHIGGFASGVLLGF 227
N + + +L G I GV N AHIGGF G+L F
Sbjct: 716 NNLPAPMFMFIFSLFSLIIGMILSFTGVTNPWAHIGGFVVGILYTF 761
>gi|66475270|ref|XP_627451.1| conserved protein with 6 transmembrane domain [Cryptosporidium
parvum Iowa II]
gi|46228919|gb|EAK89768.1| conserved protein with 6 transmembrane domain [Cryptosporidium
parvum Iowa II]
Length = 990
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 22/226 (9%)
Query: 10 QWRAWLTPV---IFVVCIIMF----VYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKE 62
++R W+ P+ IFVV F V+ + D+ C G + +
Sbjct: 555 KFRKWVNPIHGRIFVVLTTSFALVGVFFQSLIYNRLNKWDNGNC------GGVYVESFSM 608
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
N +LGP TL LGGL N + R+ + R+ +MW+H G IH+ N+ S + Y +E
Sbjct: 609 NSMLGPCSKTLSALGGLVVNEL-RQGEMIRMFWAMWMHTGFIHIGFNVISQAQLGYMIEP 667
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
++G R L+ LSG GG+L + ++VG+SG LFG+ + NW
Sbjct: 668 DWGILRFFLLFFLSGVGGNLAVAVISPCS---LTVGSSGGLFGITAASIPYTFENW---- 720
Query: 183 NKCTSLSVLGSVIALNLAFGFIPGVDGVDN-LAHIGGFASGVLLGF 227
N + + +L G I GV N AHIGGF G+L F
Sbjct: 721 NNLPAPMFMFIFSLFSLIIGMILSFTGVTNPWAHIGGFVVGILYTF 766
>gi|264681541|ref|NP_766160.2| inactive rhomboid protein 2 [Mus musculus]
gi|264681547|ref|NP_001161152.1| inactive rhomboid protein 2 [Mus musculus]
gi|81873327|sp|Q80WQ6.1|RHDF2_MOUSE RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2; AltName: Full=Rhomboid
veinlet-like protein 6; AltName: Full=Rhomboid-related
protein
gi|30354647|gb|AAH52182.1| Rhomboid 5 homolog 2 (Drosophila) [Mus musculus]
gi|37726547|gb|AAO34122.1| rhomboid-related protein [Mus musculus]
gi|148702639|gb|EDL34586.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 827
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ S++LHAGI+H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 623 DQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 738 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDKY 770
>gi|309803097|ref|ZP_07697194.1| peptidase, S54 family [Lactobacillus iners LactinV 11V1-d]
gi|309806110|ref|ZP_07700129.1| peptidase, S54 family [Lactobacillus iners LactinV 03V1-b]
gi|329920170|ref|ZP_08277001.1| peptidase, S54 family [Lactobacillus iners SPIN 1401G]
gi|349611504|ref|ZP_08890739.1| hypothetical protein HMPREF1027_00166 [Lactobacillus sp. 7_1_47FAA]
gi|308164605|gb|EFO66855.1| peptidase, S54 family [Lactobacillus iners LactinV 11V1-d]
gi|308167465|gb|EFO69625.1| peptidase, S54 family [Lactobacillus iners LactinV 03V1-b]
gi|328936624|gb|EGG33068.1| peptidase, S54 family [Lactobacillus iners SPIN 1401G]
gi|348608597|gb|EGY58577.1| hypothetical protein HMPREF1027_00166 [Lactobacillus sp. 7_1_47FAA]
Length = 232
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+ L D G ++ +V K Q +RL ++ ++HAG H++ N+ + LEQ G R
Sbjct: 41 DINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS-ELIANWTIYANKCTS 187
+YLLSG GG+LLS G+ ++S GAS A+FGL+G++L+ + N I A
Sbjct: 101 YLTIYLLSGVGGNLLS--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAVIIGR 158
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ L + + + F F+P VD + HIGG +G LL IL
Sbjct: 159 QAFLLLICNIVVDF-FMPSVDII---GHIGGTITGFLLTIIL 196
>gi|238853801|ref|ZP_04644167.1| membrane-associated serine protease [Lactobacillus gasseri 202-4]
gi|238833610|gb|EEQ25881.1| membrane-associated serine protease [Lactobacillus gasseri 202-4]
Length = 228
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+TL LG ++ L+ ++Q +RL ++ +LH G +H+ N + V +E G
Sbjct: 36 TNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYVGQFMEPLLGHW 95
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YLLSG GG+LLS + G +VS GAS ALFGL G +++ +AN I A
Sbjct: 96 RFLSVYLLSGIGGNLLS--YAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLG 153
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
L I +NLA +D L H+G SG LLG I
Sbjct: 154 KQALALAI-INLALDLFA--SHIDILGHLGDLISGFLLGII 191
>gi|153811275|ref|ZP_01963943.1| hypothetical protein RUMOBE_01667 [Ruminococcus obeum ATCC 29174]
gi|149832773|gb|EDM87857.1| peptidase, S54 family [Ruminococcus obeum ATCC 29174]
Length = 163
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Query: 75 DLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYL 134
D G +I++ + YRL + M+LH GI HL+ NM L ++ RLEQ G + +YL
Sbjct: 5 DCGAAFTPMIIQGGEYYRLFTCMFLHFGIEHLLNNMLVLFVLGSRLEQVIGKIKFLLIYL 64
Query: 135 LSGFGGSLLSCLHHKGKKEI-VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS 193
+ G G+++S L ++ VS GASGA+F ++G M+ +I N + S+ +
Sbjct: 65 IGGVFGNVISLLIELRTQDFAVSAGASGAVFAVMGAMIYIVIRNKGWLGD--LSMRQILV 122
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
+ A +L FGF GVDN AH+GG SG L ++F P
Sbjct: 123 MAAFSLYFGFAS--TGVDNTAHVGGMVSGFFLA-VIFYHP 159
>gi|212530860|ref|XP_002145587.1| rhomboid family membrane protein [Talaromyces marneffei ATCC 18224]
gi|210074985|gb|EEA29072.1| rhomboid family membrane protein [Talaromyces marneffei ATCC 18224]
Length = 529
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 30/226 (13%)
Query: 20 FVVCIIMFVYTMHVNN-----CPAKT-----ADSHQCVLRDILGRYSFQPWKENYLLGPS 69
FV C+ N CP T A ++QC L ++ G +S
Sbjct: 196 FVACMKNIPGVQDANTTISWPCPNTTSSDPNASTNQCTLSELCG-FS------------G 242
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
+ + G LD NQ +R + M+LHAG++H+ NM M V +E+ G+ R
Sbjct: 243 VPNPKPNGSLDDQ--PEPNQWFRFIVPMFLHAGLVHIGFNMLMQMTVGADMERRIGWWRY 300
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS 189
A +Y SG G ++ + + I S GASGALFGL+ L +L+ W + L
Sbjct: 301 ALVYFSSGIFGFVMGGNY--AAQGISSTGASGALFGLVALSLLDLLYTWGERRSPWVELI 358
Query: 190 VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
L I ++ G +P G+DN +HIGGF G+ +G + P Y
Sbjct: 359 FLIIEIGVSFVLGLLP---GLDNFSHIGGFIMGLAMGLCMMRSPNY 401
>gi|167763036|ref|ZP_02435163.1| hypothetical protein BACSTE_01401 [Bacteroides stercoris ATCC
43183]
gi|167699376|gb|EDS15955.1| peptidase, S54 family [Bacteroides stercoris ATCC 43183]
Length = 771
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++H G+IH+++NM +L+ + LEQ G R+ Y L+G +L S H
Sbjct: 399 WRTITCNFIHIGVIHVLMNMYALLYIGIFLEQLIGGRRLISAYFLTGLFSALASLAMH-- 456
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS-LSVLGSVIALNLAFGFIPGVDG 209
E +S GASG++FGL G LS L+ + I + S L +G + NL G +G
Sbjct: 457 -PETISAGASGSIFGLYGIFLSYLVFHHRIEKGQRKSLLYSIGFFVFYNLMSG--ARAEG 513
Query: 210 VDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHIGG SG++LG I L ++
Sbjct: 514 IDNAAHIGGLVSGIILGIIYLLTDRFA 540
>gi|220929279|ref|YP_002506188.1| rhomboid family protein [Clostridium cellulolyticum H10]
gi|219999607|gb|ACL76208.1| Rhomboid family protein [Clostridium cellulolyticum H10]
Length = 519
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + Q +R +S M+LH I+HL VN SL ++ ++E+ FG R +Y +SG
Sbjct: 218 GAKVNNLIMEGQYWRFISPMFLHGDIVHLAVNCYSLYIIGSQVEKIFGRGRFLAIYFVSG 277
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
F GS S SVGASGA+FGL+G ML + + K + L +++ +
Sbjct: 278 FIGSAASFAFSLNS----SVGASGAIFGLVGAMLYFSLRRPALL--KSSYGVNLITMLII 331
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVL 224
NLA+GF+ +DN AHIGGF G L
Sbjct: 332 NLAYGFMN--KRIDNHAHIGGFVGGFL 356
>gi|348551344|ref|XP_003461490.1| PREDICTED: inactive rhomboid protein 2-like [Cavia porcellus]
Length = 824
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG++H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 620 DQFYRLWLSLFLHAGLVHCLVSVIFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIF 679
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 680 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLFAIVLFLFICGLLP-- 734
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 735 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDKY 767
>gi|346306942|ref|ZP_08849090.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
gi|345907306|gb|EGX77017.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
Length = 199
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + Y L++SM+LH G HL+ NM L+++ Y LE E G R +YL SG G+L+
Sbjct: 48 LMNGERYYTLITSMFLHFGFSHLMNNMVMLLVIGYSLEPEIGKIRFLFIYLGSGLMGNLV 107
Query: 144 SCLHHKGKKE-IVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI--ALNLA 200
S + VS GASGA+FG++G +L I N + +S G V+ L+L
Sbjct: 108 SAWFDVSQGSYAVSAGASGAIFGIVGALLYVAIRN----HGRVGEISTRGLVLMAGLSLY 163
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+GF GVDN AHIGG SG LL + + + +
Sbjct: 164 YGFTA--QGVDNAAHIGGLISGFLLAVLTYWKHK 195
>gi|354489445|ref|XP_003506873.1| PREDICTED: inactive rhomboid protein 2 [Cricetulus griseus]
Length = 825
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ S++LHAGI+H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 621 DQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 680
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 681 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLP-- 735
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 736 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDKY 768
>gi|146418118|ref|XP_001485025.1| hypothetical protein PGUG_02754 [Meyerozyma guilliermondii ATCC
6260]
Length = 648
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+Q YR+++ ++LHAG +H++ N+ + + +E++ G + A +YL+SG GG +L
Sbjct: 305 EPDQWYRIITPIFLHAGFLHIIFNLLLQVTMGASIERQIGVIKFAIIYLMSGIGGFVLGA 364
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIYANKCTSL--SVLGSVIALNL 199
+ I S G SGALFG++ T + + N +Y K L ++ + I ++
Sbjct: 365 --NFSPNGIASTGCSGALFGIVATNIIMFVYCGRKNTNLYGTKHYVLFIFIMLTEIVVSF 422
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDA 249
G +P G+DN +H+GGFA G+L +L P + YV +G D+
Sbjct: 423 VLGLLP---GLDNFSHLGGFAMGLLTSILLLQDPFFVYVDGIITYSGRDS 469
>gi|148702640|gb|EDL34587.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_b [Mus musculus]
Length = 888
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ S++LHAGI+H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 684 DQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 743
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 744 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLP-- 798
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S+KY
Sbjct: 799 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDKY 831
>gi|326435850|gb|EGD81420.1| hypothetical protein PTSG_02140 [Salpingoeca sp. ATCC 50818]
Length = 1498
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
R +Q YRL +M+LH G +HL + + +E+ G+ R+ +Y+L+G GG L+S
Sbjct: 1294 RPDQWYRLYLAMFLHVGFVHLFFVVLMQHSFAVEIEKLAGWLRMFFIYMLAGIGGYLVSA 1353
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ VS GAS AL+GLLG + EL +W + + L + + LA G +P
Sbjct: 1354 NFTPYQ---VSTGASPALYGLLGCLFVELFQSWQLLESPKKEFLKLFLIAIVALAVGLLP 1410
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFL 231
+DN +H+GGFA G+ L I+FL
Sbjct: 1411 ---YIDNWSHLGGFAFGI-LSSIVFL 1432
>gi|15894241|ref|NP_347590.1| hypothetical protein CA_C0954 [Clostridium acetobutylicum ATCC 824]
gi|337736171|ref|YP_004635618.1| hypothetical protein SMB_G0971 [Clostridium acetobutylicum DSM
1731]
gi|384457680|ref|YP_005670100.1| hypothetical protein CEA_G0966 [Clostridium acetobutylicum EA 2018]
gi|15023857|gb|AAK78930.1|AE007610_10 Uncharacterized membrane protein [Clostridium acetobutylicum ATCC
824]
gi|325508369|gb|ADZ20005.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
gi|336291944|gb|AEI33078.1| hypothetical protein SMB_G0971 [Clostridium acetobutylicum DSM
1731]
Length = 328
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 83/159 (52%), Gaps = 21/159 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G ++++ Q YRL++ M+LHAGI H+ NM SL + Y LE +G R +Y +SG
Sbjct: 177 GAKNSVLIDNGQYYRLITCMFLHAGITHIGANMYSLYSMGYMLENIYGKLRYTAIYFISG 236
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTM------LSELIANWTIYANKCTSLSVL 191
S S + +E +SVGASGA+FGLLG L + I +AN +
Sbjct: 237 ITASFFSYIF---SRESLSVGASGAIFGLLGAAIVFGFKLRKRIGK-AFFAN-------M 285
Query: 192 GSVIALNLAFGF-IPGVDGVDNLAHIGGFASGVLLGFIL 229
V ALN+ F IP +D AH GGF GV++ IL
Sbjct: 286 VGVFALNIFISFTIPNIDI---FAHFGGFLGGVVVSVIL 321
>gi|308198230|ref|XP_001386926.2| Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
[Scheffersomyces stipitis CBS 6054]
gi|149388924|gb|EAZ62903.2| Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
[Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 18/181 (9%)
Query: 69 SISTLRDLGGL---DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
++S L LGG+ D I +Q YR+++ ++LHAG +H++ N+ + + +E+ G
Sbjct: 277 NLSELCGLGGVPIVDNKFI--PDQWYRVITPIFLHAGFLHIIFNLLLQITMGSSIERHIG 334
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIY 181
+ A +YL SG G LL + + I S GASGALFG++ T + I N +Y
Sbjct: 335 VLKYAIIYLSSGIAGFLLGA--NFTPQGIASTGASGALFGIVATNILLFIYCGRKNTNLY 392
Query: 182 ANKCTSLSV---LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYV 238
+ L + +G +I ++L G +P G+DN +HIGGFA GVL + P + Y+
Sbjct: 393 GTRHYVLFICIMVGEII-ISLVLGLLP---GLDNFSHIGGFAMGVLTAVVFLPDPFFVYI 448
Query: 239 S 239
Sbjct: 449 D 449
>gi|126335253|ref|XP_001364793.1| PREDICTED: rhomboid family member 1-like [Monodelphis domestica]
Length = 857
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 24/190 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +YLLSG G+L S +
Sbjct: 653 DQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIF 712
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P +
Sbjct: 713 LPYRAE---VGPAGSQFGILACLFVELFQSWQILAQPWRAFFKLLAVVLFLFTFGLLPWI 769
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
D FA+ LGFI ++ YI+ G K+ Y++ C II
Sbjct: 770 D---------NFATS--LGFISAFFSPCPFLP--YISFG--------KFDLYRKRCQIIV 808
Query: 268 LILLVLGYIT 277
++ LG ++
Sbjct: 809 FQIIFLGLLS 818
>gi|190346548|gb|EDK38656.2| hypothetical protein PGUG_02754 [Meyerozyma guilliermondii ATCC
6260]
Length = 648
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+Q YR+++ ++LHAG +H++ N+ + + +E++ G + A +YL+SG GG +L
Sbjct: 305 EPDQWYRIITPIFLHAGFLHIIFNLLLQVTMGASIERQIGVIKFAIIYLMSGIGGFVLGA 364
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIYANKCTSL--SVLGSVIALNL 199
+ I S G SGALFG++ T + + N +Y K L ++ + I ++
Sbjct: 365 --NFSPNGIASTGCSGALFGIVATNIIMFVYCGRKNTNLYGTKHYVLFIFIMLTEIVVSF 422
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDA 249
G +P G+DN +H+GGFA G+L +L P + YV +G D+
Sbjct: 423 VLGLLP---GLDNFSHLGGFAMGLLTSILLLQDPFFVYVDGIITYSGRDS 469
>gi|338730738|ref|YP_004660130.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
gi|335365089|gb|AEH51034.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
Length = 230
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+V + YR++++M++H G++HL+ N +L +E +G + YLL+G G+L
Sbjct: 47 LVSGGEWYRVITAMFVHGGLLHLLFNSYALFYFGTIVESIYGTEKFVIFYLLAGAVGNLA 106
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWT-IYANKCTSLSVLGSVIALNLAFG 202
+ H +SVGASGA+FGL+G + + T I+ + T +++L +I N+ +G
Sbjct: 107 T---HVFYYRSISVGASGAIFGLVGILFALGFRRDTPIFMRQFTGMALLPMII-FNVVYG 162
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
F+PG + ++N AH+GGF +G+ +G+ RP Y
Sbjct: 163 FMPGSN-INNAAHLGGFLAGMAIGYFADPRPVY 194
>gi|376261459|ref|YP_005148179.1| hypothetical protein [Clostridium sp. BNL1100]
gi|373945453|gb|AEY66374.1| putative membrane protein [Clostridium sp. BNL1100]
Length = 519
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + Q +R + M+LHA I+HL VN S+ ++ ++E+ FG R +Y +SG
Sbjct: 218 GAKVNNLIMEGQYWRFFAPMFLHADIVHLAVNCYSIYIIGSQVEKIFGRGRFLAIYFVSG 277
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
F GS S SVGASGA+FGL+G ML + + K + L +++ +
Sbjct: 278 FIGSAASFAFSLNS----SVGASGAIFGLVGAMLYFSLRRPALL--KSSYGVNLITMLVI 331
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVL 224
NLA+GF+ +DN AHIGGF G L
Sbjct: 332 NLAYGFMN--KRIDNHAHIGGFVGGFL 356
>gi|148657883|ref|YP_001278088.1| rhomboid family protein [Roseiflexus sp. RS-1]
gi|148569993|gb|ABQ92138.1| Rhomboid family protein [Roseiflexus sp. RS-1]
Length = 283
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 9/155 (5%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH 148
Q YR L++M+LH I HL N +L + + E+ FG R LYL++G GG ++S +
Sbjct: 98 QYYRFLTAMFLHGSIAHLFFNSFALYSLGFEAERIFGSQRFLALYLIAGLGGGVMSYAFN 157
Query: 149 KGKKEIVSVGASGALFGLLGTMLS-ELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
SVGASGA+FGL+G +++ ++A + L L V+ +NLA GF
Sbjct: 158 PNP----SVGASGAIFGLIGALIAFYVVARSVLGGIARQQLGSLIFVVMINLALGFTSPY 213
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN AHIGG +G ++G++ L P++ Y
Sbjct: 214 --IDNNAHIGGLLTGAVIGWL--LAPRFALDPRSY 244
>gi|148269479|ref|YP_001243939.1| rhomboid family protein [Thermotoga petrophila RKU-1]
gi|170288153|ref|YP_001738391.1| rhomboid family protein [Thermotoga sp. RQ2]
gi|281411803|ref|YP_003345882.1| Rhomboid family protein [Thermotoga naphthophila RKU-10]
gi|147735023|gb|ABQ46363.1| Rhomboid family protein [Thermotoga petrophila RKU-1]
gi|170175656|gb|ACB08708.1| Rhomboid family protein [Thermotoga sp. RQ2]
gi|281372906|gb|ADA66468.1| Rhomboid family protein [Thermotoga naphthophila RKU-10]
Length = 235
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 85/143 (59%), Gaps = 6/143 (4%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+RL++++++H GI+H++ N +L +E +G + Y +G G+L + H
Sbjct: 55 FRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLAT---HVF 111
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
+ +SVGASGA+FGL+G + + T + K + L +I +N+ +GF+PG + +
Sbjct: 112 YHDTISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGMSLLPIILINVVYGFLPGTN-I 170
Query: 211 DNLAHIGGFASGVLLGFILFLRP 233
+N AH+GGF SG+LLG+ +RP
Sbjct: 171 NNAAHLGGFLSGMLLGYT--MRP 191
>gi|225386984|ref|ZP_03756748.1| hypothetical protein CLOSTASPAR_00734 [Clostridium asparagiforme
DSM 15981]
gi|225046996|gb|EEG57242.1| hypothetical protein CLOSTASPAR_00734 [Clostridium asparagiforme
DSM 15981]
Length = 193
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 83 LIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSL 142
L+V Q YRL++S+++H G+ HL+ NM L ++ LE+ G + YLL G G +L
Sbjct: 38 LVVDHGQYYRLVTSVFMHFGVSHLLNNMLVLFVLGDNLERALGHVKYLIFYLLCGVGANL 97
Query: 143 LSCLHHKGKKEI-VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAF 201
+S + + V GASGA+FG++G ++ + N + + LG +I L L
Sbjct: 98 VSMTVNLMTGSLSVGAGASGAIFGVVGGLVYAVGVNRGRLEDLTS--RQLGVMILLTLYH 155
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
GF +DN AHIGG A+G+LLG +L+ +P+
Sbjct: 156 GFTS--MNIDNAAHIGGLAAGILLGILLYRKPR 186
>gi|408397516|gb|EKJ76658.1| hypothetical protein FPSE_03208 [Fusarium pseudograminearum CS3096]
Length = 570
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 80 DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFG 139
D N NQ YR ++S+++HAGIIH+V N+ + ++ +E G R +Y+ +G
Sbjct: 322 DINQSPEPNQWYRFITSIFMHAGIIHIVFNLLLQLTIAKEMEMAIGPVRFLLVYMSAGIF 381
Query: 140 GSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL--SVLGSVIAL 197
G+++ + + SVGASGALFG++ +L +L+ +W + L VL VIA
Sbjct: 382 GNIMGGNYAPPGQP--SVGASGALFGIIALVLLDLLYSWKDRRSPVKDLLFIVLDMVIAF 439
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
L G +P G+DN HIGGF G+ LG + P
Sbjct: 440 VL--GLLP---GLDNFVHIGGFLMGLSLGVCVLHSPN 471
>gi|340502629|gb|EGR29302.1| rhomboid family protein, putative [Ichthyophthirius multifiliis]
Length = 255
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
+E+ LL L G +LI +NQ +R +++ +LHA +H+ NM S + L
Sbjct: 61 EESKLLEQDQQVLIKYGANVPSLIKNENQLWRFVTAAFLHANFLHIFFNMISTFIFVSSL 120
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E +GF + +++LS GG++ S + ++VGAS ALFG++G L+ LI NW
Sbjct: 121 EHTYGFFTVFYIWILSAIGGNIFSA--DFATQNSIAVGASTALFGMIGLYLAYLILNWNA 178
Query: 181 --YANKCTSLSVLGSVIALNLAFGFIPGVDG---------VDNLAHIGGFASGVLLGFIL 229
+ + +++ +++ F G G +DN H GGF +G+L G
Sbjct: 179 LRFLEDLRCFVLCMAILIVSMVFLLSSGNSGIMGGEKEQNIDNYGHFGGFITGILAGVAF 238
Query: 230 FLRPQYG 236
+YG
Sbjct: 239 PKSLEYG 245
>gi|397612848|gb|EJK61912.1| hypothetical protein THAOC_17510, partial [Thalassiosira oceanica]
Length = 434
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Query: 82 NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS 141
+L++ Q +RL++ ++LH GI HLV N SL + +E FG AR YL+SG G+
Sbjct: 248 DLLLEGRQLHRLITPVFLHGGIGHLVANSYSLKSMGNNVEGAFGPARTLATYLVSGVAGN 307
Query: 142 LLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS-VLGSVIALNLA 200
+ S ++ +VGASGA+FGL+G + L N I+ + + L I +NL
Sbjct: 308 IFSAVNSPNP----AVGASGAIFGLVGAYYTFLARNSEIFGHSGRAQKGALLETIGINLV 363
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
G V +DN HIGGF GV + +++
Sbjct: 364 LGMTNPV--IDNWGHIGGFIGGVGMSWLI 390
>gi|384485233|gb|EIE77413.1| hypothetical protein RO3G_02117 [Rhizopus delemar RA 99-880]
Length = 358
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+Q +RL+ +++HAG+IH ++NM + + + LE+ G R LY+ SG G +LS +
Sbjct: 215 PHQSFRLILPIFMHAGVIHFLMNMLTHLRLGVDLERALGTPRYVVLYMASGIYGFVLSAM 274
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPG 206
+ S G SGALFGL+G M +++ NW + + L L ++L G +P
Sbjct: 275 LSQNLS--ASTGCSGALFGLIGYMFIDVLVNWKVLPHPVRDLMSLLVSTIISLVLGLLP- 331
Query: 207 VDGVDNLAHIG 217
G+DN AHIG
Sbjct: 332 --GLDNFAHIG 340
>gi|321259830|ref|XP_003194635.1| hypothetical protein CGB_F1590W [Cryptococcus gattii WM276]
gi|317461107|gb|ADV22848.1| hypothetical protein CNBF1190 [Cryptococcus gattii WM276]
Length = 530
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q +R + ++LH GIIHL++NM + S ++E+E G +Y+L G G +L
Sbjct: 311 DQWWRFILPIFLHVGIIHLIINMLVQITASAQVEREMGTIPFLIVYMLGGIYGFVLG--G 368
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ + I SVGASGALF +L +L+ +W +L + + A G+IP
Sbjct: 369 NFTRTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKACLLVLELGIGFAMGYIP-- 426
Query: 208 DGVDNLAHIGGFASGVLLGFILF 230
+ VD LAH+GG+A G+L G IL+
Sbjct: 427 NAVDGLAHLGGWAMGILCGIILY 449
>gi|403252324|ref|ZP_10918634.1| Rhomboid family protein [Thermotoga sp. EMP]
gi|402812337|gb|EJX26816.1| Rhomboid family protein [Thermotoga sp. EMP]
Length = 235
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 86/149 (57%), Gaps = 6/149 (4%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V +RL++++++H GI+H++ N +L +E +G + Y +G G+L +
Sbjct: 49 VDAGDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLAT 108
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
H + +SVGASGA+FGL+G + + T + K + L +I +N+ +GF+
Sbjct: 109 ---HVFYHDTISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGMSLLPIILINVVYGFL 165
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRP 233
PG + ++N AH+GGF SG+LLG+ +RP
Sbjct: 166 PGTN-INNAAHLGGFLSGMLLGYT--MRP 191
>gi|126308402|ref|XP_001368925.1| PREDICTED: rhomboid family member 2-like isoform 1 [Monodelphis
domestica]
Length = 827
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG+ H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 623 DQFYRLWLSLFLHAGLGHCLVSVLFQMTILRDLEKLAGWHRIAIIFILSGITGNLASTIF 682
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + ELI +W + N + L ++ G +P
Sbjct: 683 LPYRAE---VGPAGSQFGLLACLFVELIQSWQLLENPWKAFLNLSGIVFFLFICGLLP-- 737
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQ 253
+DN+AHI GF SG+LL F YI G K+R+
Sbjct: 738 -WIDNIAHIFGFLSGLLLSFAFL----------PYITFGTGDKYRK 772
>gi|399220330|ref|NP_001100537.2| rhomboid family member 2 [Rattus norvegicus]
gi|399220332|ref|NP_001257763.1| rhomboid family member 2 [Rattus norvegicus]
Length = 825
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ S++LHAGI+H +V++ M + LE+ G+ RI+ +++LSG G+L S +
Sbjct: 621 DQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIF 680
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L +++ G +P
Sbjct: 681 LPYRAE---VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLP-- 735
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+DN+AHI GF SG+LL F +G S++Y
Sbjct: 736 -WIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDRY 768
>gi|445423375|ref|ZP_21436613.1| peptidase, S54 family [Acinetobacter sp. WC-743]
gi|444755755|gb|ELW80330.1| peptidase, S54 family [Acinetobacter sp. WC-743]
Length = 269
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 88/165 (53%), Gaps = 22/165 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + + YRL SSM+ H GI+HL++NM +L + E+ FG LYLL+G
Sbjct: 53 GADYAPLTFLEEPYRLFSSMFFHFGILHLLMNMWALYIFGDVAEKTFGKFYFLGLYLLAG 112
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLG--TMLSEL--IANWTIY 181
GSLLS L H +K I VS GASGA+ GL G T+LS N
Sbjct: 113 LMGSLLSSYLDIRNSYEFLQHFDQKLIPHVSAGASGAVMGLGGALTLLSLFPPTPNQRFI 172
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
+K + L+VL A+NLAFGF+ G++N AHIGG G ++
Sbjct: 173 LDKRSLLTVL----AINLAFGFL--ASGINNAAHIGGMLMGAVMA 211
>gi|348502086|ref|XP_003438600.1| PREDICTED: inactive rhomboid protein 1-like [Oreochromis niloticus]
Length = 865
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q RL S++LHAGI+H +V++ M V +E+ G+ RI+ +Y+LSG G+L S +
Sbjct: 661 DQFSRLWLSLFLHAGILHCLVSVLFQMTVLRDIEKLAGWLRISIIYMLSGITGNLASAIF 720
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I + + L ++ +FG +P
Sbjct: 721 LPYRAE---VGPAGSQFGILACLFVELFQSWQILERPWRAFAKLLAISVFFFSFGLLP-- 775
Query: 208 DGVDNLAHIGGFASGVLLGF 227
+DN AHI GF SG L F
Sbjct: 776 -WIDNFAHICGFVSGFFLSF 794
>gi|156094408|ref|XP_001613241.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802115|gb|EDL43514.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 593
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
LGGL+ N I + YRL S++LH G +H++ N+ + + + +E ++GF R L+
Sbjct: 279 LGGLNTNYIRNYGELYRLFWSVYLHGGFMHIIFNVICQIQILWMIEPDWGFLRTMMLFFT 338
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG G+LLS + V++G+SGAL+GL+G + + I W C L + VI
Sbjct: 339 SGVTGNLLSAVCDPCG---VTIGSSGALYGLIGALFTYYIEYWKTIPRPCCVLIFMVIVI 395
Query: 196 ALNLA---FGFIPGVDGVDNLAHIGGFASGVLLGF 227
+ FG+ DN AH+GG G+L GF
Sbjct: 396 IFGIFIGMFGY------TDNYAHMGGCLGGILYGF 424
>gi|67900700|ref|XP_680606.1| hypothetical protein AN7337.2 [Aspergillus nidulans FGSC A4]
gi|40742518|gb|EAA61708.1| hypothetical protein AN7337.2 [Aspergillus nidulans FGSC A4]
Length = 1070
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T C L ++ G F + G LD +Q +R +
Sbjct: 212 CPNATTTDSDCSLSELCG---FD----------GVPNPHPGGSLDDKPA--PDQWFRFII 256
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
M+LH+G +H+ N+ M + +E+ G+ R +YL SG G +L ++ G+ E
Sbjct: 257 PMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSSGIWGFVLGG-NYAGQGE-A 314
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S G SGALFG+L + +L+ W N L ++ IA++ G +P G+DN +H
Sbjct: 315 SCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVSFVLGLLP---GLDNFSH 371
Query: 216 IGGFASGVLLGFILF-----LRPQYGYVSEKYIA--AGYDAKHRQPK 255
+GGF G+ LG + LR + G Y+A G A++ P
Sbjct: 372 LGGFTMGLALGLCVMRSPNALRERIGLARSPYVAMSGGVAAENADPD 418
>gi|410896139|ref|XP_003961557.1| PREDICTED: inactive rhomboid protein 1-like [Takifugu rubripes]
Length = 847
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q RL S++LHAGI+H +V++ M V +E+ G+ R++ +Y+LSG G+L S +
Sbjct: 643 DQFSRLWLSLFLHAGILHCLVSVFFQMTVLRDIEKLAGWLRVSIIYMLSGITGNLASSIF 702
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I +L L ++ +FG +P
Sbjct: 703 LPYRAE---VGPAGSQFGILACLFVELFQSWQILERPWRALGKLLAISTFLFSFGLLP-- 757
Query: 208 DGVDNLAHIGGFASGVLLGFIL 229
+DN AHI GF SG L F
Sbjct: 758 -WIDNFAHICGFVSGFFLSFTF 778
>gi|336472615|gb|EGO60775.1| hypothetical protein NEUTE1DRAFT_76205 [Neurospora tetrasperma FGSC
2508]
gi|350294152|gb|EGZ75237.1| rhomboid-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 550
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 36 CPAKT-----ADSHQCVLRDILGRYSF-QPWKENYLLGPSISTLRDLGGLDRNLIVRKNQ 89
CP T A + +C L D+ G +PW + +T+ + NQ
Sbjct: 235 CPNTTTYDVNASTMKCTLSDLCGFGGVPEPWYN------ATATMES--------VPEPNQ 280
Query: 90 KYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHK 149
+R ++ M+LHAG+IH+ NM M + +E+ G R +Y+ +G G ++ +
Sbjct: 281 WWRFITPMFLHAGVIHIGFNMLLQMTIGKEMERSIGSIRFFIVYVSAGIFGFVMGG--NF 338
Query: 150 GKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDG 209
+ + GASGALFG++ +L +L+ +W + L +G I ++ G +P G
Sbjct: 339 AANGMQTTGASGALFGIIALLLLDLLYSWRDRKSPWKDLLFIGLDIVISFVLGLLP---G 395
Query: 210 VDNLAHIGGFASGVLLGFILFLRPQ 234
+DN AHIGGF +G+ LG + P
Sbjct: 396 LDNFAHIGGFLTGLALGICVLQSPN 420
>gi|389584264|dbj|GAB66997.1| rhomboid protease [Plasmodium cynomolgi strain B]
Length = 621
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
LGGL+ N I + YRL S++LH G +H++ N+ + + + +E ++GF R L+
Sbjct: 307 LGGLNTNYIRNYGEIYRLFWSVYLHGGFMHIIFNVICQIQILWIIEPDWGFIRTLILFFT 366
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG G+LLS + V++G+SGAL+GL+G + + I W C + + ++
Sbjct: 367 SGVTGNLLSAVCDPCG---VTIGSSGALYGLIGALFTYYIEYWKTIPRPCC-VVIFMLIV 422
Query: 196 ALNLAFGFIPGVDG-VDNLAHIGGFASGVLLGF 227
+ FG G+ G DN AH+GG G+L GF
Sbjct: 423 TI---FGIFIGMFGYTDNYAHMGGCLGGILYGF 452
>gi|403050890|ref|ZP_10905374.1| hypothetical protein AberL1_04958 [Acinetobacter bereziniae LMG
1003]
Length = 269
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 88/165 (53%), Gaps = 22/165 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + + YRL SSM+ H GI+HL++NM +L + E+ FG LYLL+G
Sbjct: 53 GADYAPLTFLEEPYRLFSSMFFHFGILHLLMNMWALYIFGDVAEKTFGKFYFLGLYLLAG 112
Query: 138 FGGSLLS----------CLHHKGKKEI--VSVGASGALFGLLG--TMLSEL--IANWTIY 181
GSLLS L H +K I VS GASGA+ GL G T+LS N
Sbjct: 113 LMGSLLSGYLDIRNSYEFLQHFDQKLIPHVSAGASGAVMGLGGALTLLSLFPPTPNQRFV 172
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
+K + L+VL A+NLAFGF+ G++N AHIGG G ++
Sbjct: 173 LDKRSLLTVL----AINLAFGFL--ASGINNAAHIGGMLMGAVMA 211
>gi|15643350|ref|NP_228394.1| hypothetical protein TM0584 [Thermotoga maritima MSB8]
gi|418045242|ref|ZP_12683338.1| Rhomboid family protein [Thermotoga maritima MSB8]
gi|4981102|gb|AAD35669.1|AE001733_6 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678324|gb|EHA61471.1| Rhomboid family protein [Thermotoga maritima MSB8]
Length = 235
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V +RL++++++H GI+H++ N +L +E +G + Y +G G+L +
Sbjct: 49 VDAGDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLAT 108
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
H + +SVGASGA+FGL+G + + T + K + L +I +N+ +GF+
Sbjct: 109 ---HVFYHDTISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGVSLLPIILINVVYGFL 165
Query: 205 PGVDGVDNLAHIGGFASGVLLGFIL 229
PG + ++N AH+GGF SG+LLG+ +
Sbjct: 166 PGTN-INNAAHLGGFLSGMLLGYTM 189
>gi|421128003|ref|ZP_15588221.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421133348|ref|ZP_15593496.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410022356|gb|EKO89133.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410434470|gb|EKP83608.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 514
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|431798600|ref|YP_007225504.1| hypothetical protein Echvi_3269 [Echinicola vietnamensis DSM 17526]
gi|430789365|gb|AGA79494.1| putative membrane protein [Echinicola vietnamensis DSM 17526]
Length = 516
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
++ P+ L ++GG +R V + +RL +S+++H G++HL +N+ L L + LE
Sbjct: 342 IVSPTPKELLEIGG-NRRFEVVNGEYWRLFTSIFIHGGLMHLFMNLFGLGLGASLLEGIL 400
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G ++ +++ G S+ S H+ VSVGASGA+FGL G +L+ + + IY
Sbjct: 401 GRTQLIISFIVCGILASIASIYWHENT---VSVGASGAIFGLYGLILAFTV--FKIYPTH 455
Query: 185 CTSLS--VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
++ +LG L+L FGF+ G+DN AH GG SG +LG IL L
Sbjct: 456 MRGMTWMLLGLYAGLSLLFGFL---GGIDNAAHFGGLISGFILGGILIL 501
>gi|417772121|ref|ZP_12420011.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418680537|ref|ZP_13241786.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418703562|ref|ZP_13264446.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418715819|ref|ZP_13275930.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|421118289|ref|ZP_15578634.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|400327895|gb|EJO80135.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409946078|gb|EKN96092.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410010137|gb|EKO68283.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410766698|gb|EKR37381.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410788320|gb|EKR82042.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|455668108|gb|EMF33357.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 514
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|85102797|ref|XP_961391.1| hypothetical protein NCU01305 [Neurospora crassa OR74A]
gi|16944591|emb|CAC18292.2| related to membrane protein [Neurospora crassa]
gi|28922936|gb|EAA32155.1| predicted protein [Neurospora crassa OR74A]
Length = 548
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 36 CPAKT-----ADSHQCVLRDILGRYSF-QPWKENYLLGPSISTLRDLGGLDRNLIVRKNQ 89
CP T A + +C L D+ G +PW + +T+ + NQ
Sbjct: 235 CPNTTTYDVNAPTMKCTLSDLCGFGGVPEPWYN------ATATMES--------VPEPNQ 280
Query: 90 KYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHK 149
+R ++ M+LHAG+IH+ NM M + +E+ G R +Y+ +G G ++ +
Sbjct: 281 WWRFITPMFLHAGVIHIGFNMLLQMTIGKEMERSIGSIRFFIVYVSAGIFGFVMGG--NF 338
Query: 150 GKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDG 209
+ + GASGALFG++ +L +L+ +W + L +G I ++ G +P G
Sbjct: 339 AANGMQTTGASGALFGIIALLLLDLLYSWRDRKSPWKDLLFIGLDIVISFVLGLLP---G 395
Query: 210 VDNLAHIGGFASGVLLGFILFLRPQ 234
+DN AHIGGF +G+ LG + P
Sbjct: 396 LDNFAHIGGFLAGLALGICVLQSPN 420
>gi|417784544|ref|ZP_12432250.1| peptidase, S54 family [Leptospira interrogans str. C10069]
gi|409952361|gb|EKO06874.1| peptidase, S54 family [Leptospira interrogans str. C10069]
Length = 514
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|50845218|gb|AAT84606.1| rhomboid protease 5 [Toxoplasma gondii]
Length = 585
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ LG LD N + + +R++ M+LH G +HL++N++ + LE +GF
Sbjct: 186 PNPRVFSSLGALDTNKVRNYGEMFRVVWGMFLHGGWMHLLLNVSCQAQTLWILEPAWGFL 245
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R L+++ G GSLLS + + V+VG+SGA +GLLG ++ I W A+
Sbjct: 246 RTLSLWIVGGVSGSLLSAVANPC---TVTVGSSGAFYGLLGALVPFSIEYWDHIASPAWF 302
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAH 215
L + SV+ + FG + GV GVDN AH
Sbjct: 303 LFCV-SVLVMVAQFGNMVGVQGVDNNAH 329
>gi|418701499|ref|ZP_13262424.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410759581|gb|EKR25793.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 514
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|409083166|gb|EKM83523.1| hypothetical protein AGABI1DRAFT_110173 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 493
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q +R ++ ++LHAGIIH ++NM +S ++E+E G A Y +G G++L
Sbjct: 282 SQWFRFITPIFLHAGIIHFLLNMLGQWFLSAQIEREMGSAGFIITYFAAGIFGNVLGG-- 339
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ I SVGASGA+ G L +LIA+W + L + + +++A G+IP
Sbjct: 340 NFALVGIPSVGASGAIMGTLAVTWVDLIAHWKYHYRPVRQLIFMFIELLISIAIGYIP-- 397
Query: 208 DGVDNLAHIGGFASGVLLGFILF 230
VDN AHIGGF G+ +G + +
Sbjct: 398 -YVDNFAHIGGFVMGLFVGIVFY 419
>gi|398408343|ref|XP_003855637.1| hypothetical protein MYCGRDRAFT_68129 [Zymoseptoria tritici IPO323]
gi|339475521|gb|EGP90613.1| hypothetical protein MYCGRDRAFT_68129 [Zymoseptoria tritici IPO323]
Length = 496
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 35 NCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLL 94
N + T DS C L D+ G + +N +G G LD +Q +R +
Sbjct: 205 NATSTTGDSVSCQLSDLCGFSA----DKNPRVG---------GSLDDQ--PAPDQWWRFI 249
Query: 95 SSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEI 154
++LHAGIIH+ N+ + + +E+ G R A LY +G G +L + I
Sbjct: 250 VPIFLHAGIIHIAFNLLLQLTLGRDVEKLVGSIRFAILYFAAGIFGFVLG--GNFAATGI 307
Query: 155 VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLA 214
S G SG+LFG+L L +L+ W + L + + + A G +P G+DN +
Sbjct: 308 ASTGCSGSLFGILAITLLDLLYTWKERTSPVKDLMFILVDMVIAFALGLLP---GLDNFS 364
Query: 215 HIGGFASGVLLGFILFLRP-QYGYVSEKYIAAGYDAKHRQPK 255
HIGGF G++LG L P + + Y + RQ K
Sbjct: 365 HIGGFLMGLVLGVCLLRSPSEIARRKDDVDDVAYTSVARQEK 406
>gi|430741443|ref|YP_007200572.1| hypothetical protein Sinac_0438 [Singulisphaera acidiphila DSM
18658]
gi|430013163|gb|AGA24877.1| putative membrane protein [Singulisphaera acidiphila DSM 18658]
Length = 654
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 43/224 (19%)
Query: 12 RAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIS 71
RA +TP++ C++++V + P D V+ D W ++ GPS+
Sbjct: 269 RAVVTPLMAAACVLVYVAMVARGVSPI---DPSPRVMLD---------WGASF--GPSV- 313
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
V Q +RLL+SM+LH G+IHL +N+ L+ +E+ FG A
Sbjct: 314 -------------VFDRQVWRLLTSMFLHFGLIHLAMNLWCLLTTGPVVERFFGHLGFAA 360
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSEL------IANWTIYANKC 185
LY+LSG GG+ S H + GASGA+FG+ G +L L + + +
Sbjct: 361 LYVLSGLGGAAASLFVH---PTFICAGASGAIFGVFGGLLGFLAIRHRDVPPAILQPMRS 417
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+L+ LG N+ FG +D AH+GG A+G ++G +L
Sbjct: 418 GTLAFLG----YNVLFGLTSST--IDMAAHLGGLATGFVVGLVL 455
>gi|418689558|ref|ZP_13250679.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|418729718|ref|ZP_13288265.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
gi|400361237|gb|EJP17204.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|410775896|gb|EKR55887.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
Length = 514
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|297539145|ref|YP_003674914.1| Rhomboid family protein [Methylotenera versatilis 301]
gi|297258492|gb|ADI30337.1| Rhomboid family protein [Methylotenera versatilis 301]
Length = 346
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 8/166 (4%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ + +RL ++M+LH GIIHL+VN+ SL +E+ +G R A +Y+LSG G+L+S
Sbjct: 58 TQDGEWWRLGTAMFLHFGIIHLLVNVWSLWDAGQLVERMYGHLRFAGIYVLSGLTGNLVS 117
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSEL-IANWTIYANKCTSLSVLGSVIAL-NLAFG 202
+ VS GASGA+FG+ G +L+ L +I ++ L SV ++ + FG
Sbjct: 118 LVIQGNAA--VSGGASGAIFGVYGALLTFLWRERQSIARHEFRWLFWGASVFSVATIVFG 175
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE--KYIAAG 246
FI V G+DN AHIGGF +G+ +L + VS K +AAG
Sbjct: 176 FI--VPGIDNSAHIGGFLTGIFSSILLSQSIEVKPVSRNTKLLAAG 219
>gi|118349640|ref|XP_001008101.1| Rhomboid family protein [Tetrahymena thermophila]
gi|89289868|gb|EAR87856.1| Rhomboid family protein [Tetrahymena thermophila SB210]
Length = 295
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 31/229 (13%)
Query: 31 MHVNNCPAKTADSHQCVLRDILGRYSFQPWKENY--------LLGPSISTLRDLGGLDRN 82
+ +N CP+ +S + IL SF E Y LL + +L D+G +
Sbjct: 57 LKINLCPSFKINS---ITFSILVINSFVFVLECYQTTGFGQSLLEINQKSLIDMGAVVPI 113
Query: 83 LIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSL 142
I K Q YR+L +M++HA +HL+ N SL ++ +E +G +YLLSG G ++
Sbjct: 114 DIREKGQYYRVLFAMFMHASFVHLLFNQISLFIILSAIEYSYGLLNTTIIYLLSGIGANM 173
Query: 143 LSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS--------- 193
L+ + G + VG SGA+ GLL +LS I NW NK L VLG
Sbjct: 174 LAA--NFGIDYDIYVGCSGAVTGLLACVLSYFILNW----NK---LEVLGPMREYILCIF 224
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
++ + LAF F PG + ++IGGF +G+ G + Q G EKY
Sbjct: 225 IMFMLLAFLF-PGPSSISTYSNIGGFLAGLFSGLAIPEPAQQGSY-EKY 271
>gi|407045142|gb|EKE43034.1| peptidase S54 (rhomboid) family protein, partial [Entamoeba
nuttalli P19]
Length = 330
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 5/185 (2%)
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
F+ N++LGP+ + LG + I Q +RL++ ++LH GIIHL+ N+T + +
Sbjct: 114 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 173
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
+E+ + R +Y +SG G+ S + + VGASG+L G+ G + ++I
Sbjct: 174 GMIIERRWNSFRFLIVYFVSGIIGNCFSIICQPTS---IGVGASGSLLGIFGGFVVDIII 230
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
N + N+ LS++G ++ + G+D AH+ GF G + F LF Q
Sbjct: 231 NKNKFENR-VWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFMGGAICAFGLFAH-QNP 288
Query: 237 YVSEK 241
++++K
Sbjct: 289 WITKK 293
>gi|255728583|ref|XP_002549217.1| hypothetical protein CTRG_03514 [Candida tropicalis MYA-3404]
gi|240133533|gb|EER33089.1| hypothetical protein CTRG_03514 [Candida tropicalis MYA-3404]
Length = 680
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
NQ YR+ ++LHAG +H++ N+ + + +E+ G + A +Y++SG GG LL
Sbjct: 328 NQWYRIFIPIFLHAGFLHIIFNLLLQVTMGASIERNIGILKYAIIYIVSGIGGFLLGA-- 385
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIYANKCTSL--SVLGSVIALNLAF 201
+ + I S GASGALFG++ T + I N +Y K +L ++ + I +
Sbjct: 386 NFTPQGIASTGASGALFGIVATNIILFIYTGRKNTNMYGTKHYALFICIMIAEIVITFVL 445
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
G +P G+DN +H+GGFA G+L +L P
Sbjct: 446 GLLP---GLDNFSHLGGFAMGILTSILLLKDP 474
>gi|397576168|gb|EJK50102.1| hypothetical protein THAOC_30966 [Thalassiosira oceanica]
Length = 527
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Query: 82 NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS 141
+L++ Q +RL++ ++LH GI HLV N SL + +E FG AR YL+SG G+
Sbjct: 237 DLLLEGRQLHRLITPVFLHGGIGHLVSNSYSLKSMGNNVEGAFGPARTLATYLVSGVAGN 296
Query: 142 LLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS-VLGSVIALNLA 200
+ S ++ +VGASGA+FGL+G + L N I+ + + L I +NL
Sbjct: 297 IFSAVNSPNP----AVGASGAIFGLVGAYYTFLARNSEIFGHSGRAQKGALLETIGINLV 352
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
G V +DN H+GGF GV + +++
Sbjct: 353 LGMTNPV--IDNWGHLGGFIGGVGMSWLI 379
>gi|331268929|ref|YP_004395421.1| rhomboid family membrane protein [Clostridium botulinum BKT015925]
gi|329125479|gb|AEB75424.1| rhomboid family membrane protein [Clostridium botulinum BKT015925]
Length = 335
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ Q YRL++ M+LH G++HL++NM +L + +E+ +G + +YL+ G
Sbjct: 185 GAKENTLIASGQYYRLITCMFLHGGLMHLILNMYALKALGPMIEKSYGKMKYVIIYLVGG 244
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
S+ S + G VS+GASGA+F LLG +L I ++ A K +V+ SVI +
Sbjct: 245 LISSISSYIFSNG----VSIGASGAIFSLLGAILVLTIKMRSV-AGKDVIKNVV-SVIVI 298
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
N+ G + +DN AHIGG GV L IL
Sbjct: 299 NIFIGL--AIPNIDNFAHIGGLLGGVFLSIIL 328
>gi|242817342|ref|XP_002486936.1| rhomboid family membrane protein [Talaromyces stipitatus ATCC
10500]
gi|218713401|gb|EED12825.1| rhomboid family membrane protein [Talaromyces stipitatus ATCC
10500]
Length = 526
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 99/226 (43%), Gaps = 30/226 (13%)
Query: 20 FVVCIIMFVYTMHVN-----NCPAKTADS-----HQCVLRDILGRYSFQPWKENYLLGPS 69
FV C+ N CP T+ +QC L ++ G K N L
Sbjct: 196 FVACMKNIPGVQDANATITWPCPNTTSSDPNTAMNQCTLSELCGFGGVPNPKPNGSL--- 252
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
N NQ +R + M+LHAG++H+ NM M V +E+ G+ R
Sbjct: 253 ------------NDQPEPNQWFRFIVPMFLHAGLVHIGFNMLMQMTVGADMERRIGWWRY 300
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS 189
A +Y SG G ++ + + I S GASGALFGL+ L +L+ W + L
Sbjct: 301 ALVYFSSGIFGFVMGG--NYAAQGISSTGASGALFGLVALTLLDLLYTWGERRSPWVELI 358
Query: 190 VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
L IA++ G +P G+DN +HIGGF G+ +G + P Y
Sbjct: 359 FLIIEIAVSFVLGLLP---GLDNFSHIGGFIMGLAMGLCMMRSPNY 401
>gi|456824612|gb|EMF73038.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 226
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 74 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 133
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 134 LCGSLASIVWY---PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 190
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 191 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 223
>gi|421107208|ref|ZP_15567763.1| peptidase, S54 family [Leptospira kirschneri str. H2]
gi|410007727|gb|EKO61413.1| peptidase, S54 family [Leptospira kirschneri str. H2]
Length = 514
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN +HIGG G +LG ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|418679207|ref|ZP_13240471.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418686873|ref|ZP_13248037.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|421090060|ref|ZP_15550861.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|400320332|gb|EJO68202.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410001323|gb|EKO51937.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|410738580|gb|EKQ83314.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
Length = 514
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN +HIGG G +LG ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|398339922|ref|ZP_10524625.1| hypothetical protein LkirsB1_10989 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 514
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN +HIGG G +LG ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|418741786|ref|ZP_13298160.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410751234|gb|EKR08213.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 514
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN +HIGG G +LG ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|381210355|ref|ZP_09917426.1| hypothetical protein LGrbi_10556 [Lentibacillus sp. Grbi]
Length = 520
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 8/163 (4%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S TL + G I+ + +R+++SM+LH GI+HL++NM ++ + +E+ +G R
Sbjct: 208 STETLIEFGAKYNPAIIEDGEWWRIVASMFLHIGILHLLMNMLAVYYLGTVVERIYGSLR 267
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+Y L+G GG L S VS GASGALFGL G +L + I+ + +
Sbjct: 268 FLIIYFLAGIGGGLASFAFTTN----VSAGASGALFGLFGALLFFGCIHRRIFF-QTMGM 322
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
++L +I +N+ FG V VDN AH+GG +G + ILFL
Sbjct: 323 NLL-FIIGINIVFGL--SVPQVDNGAHMGGLITGFIASAILFL 362
>gi|344232848|gb|EGV64721.1| rhomboid-domain-containing protein [Candida tenuis ATCC 10573]
Length = 535
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 15/189 (7%)
Query: 59 PWKENYLLGPSISTLRDLGGLDRNLIVRK----NQKYRLLSSMWLHAGIIHLVVNMTSLM 114
P + + + +L L GL IV +Q YR+++ +++HAG +H++ N+ +
Sbjct: 164 PCPNSTSVDTDVCSLNQLCGLSGIPIVDDAYDPHQWYRIITPIFIHAGFLHILFNLLLQV 223
Query: 115 LVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSEL 174
+ + +E+ G + A +YLLSG G LL + + S GASG+LFG++ T +
Sbjct: 224 TMGFSIERAIGSVKYAIIYLLSGVSGFLLGA--NFTPNGVASSGASGSLFGIVATNIVMF 281
Query: 175 I----ANWTIYANKCTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
I N +Y K L ++ I ++ G +P G+DN +HIGGFA GVL +
Sbjct: 282 IYCGKKNTNMYGTKKFGLFLCIMFGEIVVSFVLGLLP---GLDNFSHIGGFAIGVLSSIL 338
Query: 229 LFLRPQYGY 237
L P + Y
Sbjct: 339 LLKDPFFVY 347
>gi|358012853|ref|ZP_09144663.1| hypothetical protein AP8-3_15163 [Acinetobacter sp. P8-3-8]
Length = 270
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 90/173 (52%), Gaps = 23/173 (13%)
Query: 71 STLRDLG-GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
STL L G D + + YRL SSM+ H GI+HL++NM +L + EQ FG A
Sbjct: 46 STLDALRWGADYAPLTFLEEPYRLFSSMFFHFGILHLMMNMWALFVFGNVAEQTFGRAYY 105
Query: 130 APLYLLSGFGGSLLS----------CLHHKGKKEI--VSVGASGALFGLLG--TMLSEL- 174
LY+++G GSLLS L K + VS GASGA+ GL G MLS
Sbjct: 106 LGLYIIAGLMGSLLSGYLDIRNSYALLQSFDVKLLPHVSAGASGAVMGLGGALAMLSLFP 165
Query: 175 -IANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
+ N +K + LS+L A+NLAFGF G++N AHIGG G +L
Sbjct: 166 PVPNQRFILDKKSLLSIL----AINLAFGFF--ATGINNAAHIGGMVMGAILA 212
>gi|451847170|gb|EMD60478.1| hypothetical protein COCSADRAFT_40121 [Cochliobolus sativus ND90Pr]
Length = 535
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 36 CPAKT---ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYR 92
CP T ++ QC L ++ G S P + S++ +D NQ +R
Sbjct: 230 CPNTTVITPNTPQCSLAELCGMGSGVPDQS------SVTDFKDRSH-------EPNQWWR 276
Query: 93 LLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKK 152
++ M+LHAG+IH+ NM + +E+E G R A +Y +G G +L +
Sbjct: 277 FITPMFLHAGVIHIGFNMLLQWTLGRDMEKEIGPLRFALVYFSAGIFGFVLG--GNYAPD 334
Query: 153 EIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDN 212
I SVG SG+LFG+L L +L+ +W+ + L L +A+ G +P G+DN
Sbjct: 335 GITSVGCSGSLFGVLALTLLDLLYHWSTRRSPVKDLLFLLLDMAIAFVIGLLP---GLDN 391
Query: 213 LAHIGGFASGVLLGFILFLRPQ 234
+HIGGF G++LG + P+
Sbjct: 392 FSHIGGFLMGLVLGICILHSPE 413
>gi|334131953|ref|ZP_08505715.1| Rhomboid-like protein [Methyloversatilis universalis FAM5]
gi|333443426|gb|EGK71391.1| Rhomboid-like protein [Methyloversatilis universalis FAM5]
Length = 383
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 100/192 (52%), Gaps = 16/192 (8%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ Q +RL S+M+LH G++HL +NM SL +E+ FG R +Y+LSG G+LLS
Sbjct: 62 TKDGQWWRLGSAMFLHFGLLHLGMNMASLFDGGRLVERMFGPLRFLAIYVLSGLTGNLLS 121
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI--ALNLAFG 202
+ + VS GASGA+FG+ G +L+ L + G+ + A+ + G
Sbjct: 122 LIVQGDRA--VSGGASGAIFGVYGALLAFLWQQRDTLDRREFVRLFWGAGLFAAITIVLG 179
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQL 262
+ G+DN AHIGGF SG+L G L +RP A ++RQP H Q L
Sbjct: 180 L--NIPGIDNGAHIGGFISGLLAGAAL-VRP--------LDADSLLGRYRQPLASHGQWL 228
Query: 263 C-WIIALILLVL 273
+AL++ VL
Sbjct: 229 AGGALALLIAVL 240
>gi|399889571|ref|ZP_10775448.1| hypothetical protein CarbS_13682 [Clostridium arbusti SL206]
Length = 323
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 10/157 (6%)
Query: 75 DLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYL 134
D G N ++ + YRL + M+LH+GI+H+ NM SL + +E FG + +YL
Sbjct: 169 DFLGAKDNTLINSGEYYRLFTCMFLHSGIVHIASNMYSLYSIGGLVESIFGRKKYIIMYL 228
Query: 135 LSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
LSG SL S + G +SVGASGA+FG+LG +L +I++ + + V
Sbjct: 229 LSGLIASLFSYVFSSG----ISVGASGAIFGVLGGVL--VISHKLKHRIGKGLFRNIIFV 282
Query: 195 IALNLAFGF-IPGVDGVDNLAHIGGFASGVLLGFILF 230
IA+NL F IP +D AH+GG SG+++ + +F
Sbjct: 283 IAINLFISFTIPNIDIS---AHLGGLISGIIISWFIF 316
>gi|392553138|ref|ZP_10300275.1| rhomboid-like protein [Pseudoalteromonas spongiae UST010723-006]
Length = 360
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+ LL+ ++LH ++HLV NM L ++ LE G + YL+ G G SL S + +
Sbjct: 196 WTLLTCVFLHGSVMHLVGNMYFLYIIGDNLEDALGHKKYLMYYLICGIGASLFSLVMSQ- 254
Query: 151 KKEIVSVGASGALFGLLGTML-----SELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
I SVGASGA+ GL G L + L + IY K +++ IA+N+ FG I
Sbjct: 255 DPNIPSVGASGAIAGLFGMYLMWFRHASLTFMFVIYQKKLSAVWFFAIWIAINI-FGLIV 313
Query: 206 GVDGVDNLAHIGGFASGVLLGFIL 229
DGVD AHIGGF G+++G+ L
Sbjct: 314 LQDGVDYGAHIGGFVVGLVIGYFL 337
>gi|121716844|ref|XP_001275927.1| DHHC zinc finger membrane protein [Aspergillus clavatus NRRL 1]
gi|119404084|gb|EAW14501.1| DHHC zinc finger membrane protein [Aspergillus clavatus NRRL 1]
Length = 526
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 13/170 (7%)
Query: 80 DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFG 139
DR + NQ +R + M+LH GIIH+ N+ M + +E+ G+ R A +YL SG
Sbjct: 245 DRPM---PNQWFRFIIPMFLHTGIIHIGFNLLVQMTMGADMERTVGWWRYAFVYLASGIW 301
Query: 140 GSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNL 199
G +L ++ + E S G SG+LFG+L + +L+ W A+ T L ++ I ++
Sbjct: 302 GFVLGG-NYAAQGE-SSCGCSGSLFGILALYILDLLYTWNERASPLTELIIMVIGIGISF 359
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVLLGFILF-----LRPQYGYVSEKYIA 244
G +P G+DN +HIGGF G+ G + LR + G Y+A
Sbjct: 360 VLGLLP---GLDNFSHIGGFVMGLASGLCIMRSPNALRERIGLARNPYVA 406
>gi|407927474|gb|EKG20366.1| Peptidase S54 rhomboid [Macrophomina phaseolina MS6]
Length = 557
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 69 SISTLRDLGGL-DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
S+STL + G+ + N + NQ YR + ++LH G+IH+ NM + V +E+ G
Sbjct: 268 SLSTLCGMTGIPESNGELHPNQWYRFIVPIFLHGGLIHIGFNMLVQVTVGRDMEKLIGSI 327
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +Y +G G++L + SVGASGA+FG++ L +L+ +W N
Sbjct: 328 RFFLVYFAAGIFGNVLGANYAPNGSP--SVGASGAIFGIIALTLLDLLYHWKERLNPKRE 385
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
L + + + G +P G+DN AHIGGF G+ LG + PQ
Sbjct: 386 LLFIMLDVVIAFVLGLLP---GLDNFAHIGGFIMGLGLGISILHSPQ 429
>gi|209876404|ref|XP_002139644.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555250|gb|EEA05295.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 469
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
+N LLGP + ++G LD NLI R+ Q RL S WLH G++HL +N+ S + + L
Sbjct: 141 SDNSLLGPPAQVIFNMGALDTNLI-RQGQISRLFWSFWLHTGLLHLAINVLSQIALGVIL 199
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E + R LY + G G+L S + +S G+S F LL ++ L+ NW
Sbjct: 200 ETRWVVWRYIILYYIGGLVGNLASAVLDPCS---ISAGSSACFFALLAGVIVMLLENW-- 254
Query: 181 YANKCTSLS-------VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
K T+ L +++ ++L+F + DN AHIGGF +G L
Sbjct: 255 ---KHTNWQFFYVISICLATLLGISLSF-----MSNTDNWAHIGGFTAGFL 297
>gi|410902671|ref|XP_003964817.1| PREDICTED: inactive rhomboid protein 1-like [Takifugu rubripes]
Length = 858
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 24/187 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +Y++SG G+L S +
Sbjct: 654 DQFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIF 713
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + + L V+ AFG +P
Sbjct: 714 LPYRAE---VGPAGSQFGILACLFVELFQSWQILAQPWRAFTKLLCVVLFLFAFGLLP-- 768
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F YI+ G + Y++ C II
Sbjct: 769 -WIDNFAHISGFISGFFLSFAFL----------PYISFG--------RMDLYRKRCQIIV 809
Query: 268 LILLVLG 274
+++ LG
Sbjct: 810 FLMVFLG 816
>gi|222099054|ref|YP_002533622.1| Rhomboid family protein precursor [Thermotoga neapolitana DSM 4359]
gi|221571444|gb|ACM22256.1| Rhomboid family protein precursor [Thermotoga neapolitana DSM 4359]
Length = 236
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 83/139 (59%), Gaps = 4/139 (2%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+RL++++++H GI+H++ N +L +E +G + Y +G G++ + H
Sbjct: 56 FRLITALFVHGGILHILFNSYALYYFGLIVEDIYGSEKFLFSYFFTGVVGNIAT---HIF 112
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
+ +SVGASGA+FGL+G + + T + K + L +I +N+ +GF+PG + +
Sbjct: 113 YHDTISVGASGAIFGLIGVLFAAGFRKDTPFFMKPVTGVSLLPIILINVVYGFLPGTN-I 171
Query: 211 DNLAHIGGFASGVLLGFIL 229
+N AH+GGF SG+LLG+ +
Sbjct: 172 NNAAHLGGFLSGMLLGYTM 190
>gi|227889556|ref|ZP_04007361.1| S54 family peptidase [Lactobacillus johnsonii ATCC 33200]
gi|227849858|gb|EEJ59944.1| S54 family peptidase [Lactobacillus johnsonii ATCC 33200]
Length = 228
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+ L LG ++ L+ ++Q +RL ++ +LH G +H+ N + + +E G
Sbjct: 36 TNINILVRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYMGQFMEPLLGHW 95
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YLLSG GG+LLS + G +VS GAS ALFGL G +++ +AN I A
Sbjct: 96 RFLTVYLLSGIGGNLLS--YAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLG 153
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
L I +NLA V ++ L H+GG SG LLG I
Sbjct: 154 KQALTLAI-INLALDLF--VSHINILGHLGGLISGFLLGII 191
>gi|417766158|ref|ZP_12414112.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400351612|gb|EJP03831.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
Length = 514
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RL++++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|449710524|gb|EMD49581.1| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
KU27]
Length = 334
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
F+ N++LGP+ + LG + I Q +RL++ ++LH GIIHL+ N+T + +
Sbjct: 118 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 177
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
+E+ + R +Y +SG G+ S + + + VGASG+L G+ G + ++I
Sbjct: 178 GMIIERRWNSFRFLIVYFVSGIIGNCFSII---CQPTSIGVGASGSLLGIFGGFVVDIII 234
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
N + N+ LS++G ++ + G+D AH+ GF G + F LF Q
Sbjct: 235 NKKKFENR-VWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFIGGAICAFGLFAH-QNP 292
Query: 237 YVSEK 241
++++K
Sbjct: 293 WITKK 297
>gi|45658531|ref|YP_002617.1| hypothetical protein LIC12696 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421085386|ref|ZP_15546239.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|421103683|ref|ZP_15564280.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45601774|gb|AAS71254.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410366646|gb|EKP22037.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432022|gb|EKP76380.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|456984467|gb|EMG20522.1| peptidase, S54 family [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 239
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 87 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 146
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 147 LCGSLASIVWY---PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 203
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 204 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 236
>gi|241950141|ref|XP_002417793.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641131|emb|CAX45507.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 666
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 19/178 (10%)
Query: 70 ISTLRDLGGLDRNLIVRKN--------QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
+ +L +L GL + I N Q YR+ ++LHAG +H++ N+ + + +E
Sbjct: 287 VCSLSELCGLTKLKIDNNNGTSAYLPDQWYRIFIPIFLHAGFLHIIFNLLLQVTMGASIE 346
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI----AN 177
+ G + A +Y+ SG GG LL + + I S GASGALFG++ T + I N
Sbjct: 347 RNIGIIKYAIIYISSGIGGFLLGA--NFTPQGIASTGASGALFGIVATNIILFIYTGKKN 404
Query: 178 WTIYANKCTSL--SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
+Y K +L ++ I ++L G +P G+DN +HIGGFA G+L ++ P
Sbjct: 405 TNMYGTKHYALFICIMIGEIVISLVLGLLP---GLDNFSHIGGFAMGILSSIVVLKDP 459
>gi|418670564|ref|ZP_13231935.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|421121687|ref|ZP_15581980.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|410345538|gb|EKO96634.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|410753946|gb|EKR15604.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
Length = 226
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 74 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 133
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 134 LCGSLASIVWY---PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 190
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 191 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 223
>gi|302421084|ref|XP_003008372.1| rhomboid family membrane protein [Verticillium albo-atrum VaMs.102]
gi|261351518|gb|EEY13946.1| rhomboid family membrane protein [Verticillium albo-atrum VaMs.102]
Length = 524
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 69 SISTLRDLGGL----DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
S+ L GG+ D N NQ +R ++ ++LHAG+IH+ VNM M + +E
Sbjct: 246 SLGELCGFGGVPNPQDPNEKGEPNQWFRFITPIFLHAGLIHIGVNMLLQMTIGKEMEMAI 305
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G R +Y +G G+++ ++ G E S GASGALFG++ +L +W +
Sbjct: 306 GPVRFFLVYFSAGIFGNVMGA-NYAGTGE-ASTGASGALFGIIALTALDLAYSWKDRRHP 363
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF-----LRPQYGYVS 239
L + + + G +P G+DN AHIGGF G+ LG + LR + GY +
Sbjct: 364 VKDLMFVLLDVVICFVLGLLP---GLDNFAHIGGFLMGLCLGICVLHSPNSLRRRLGYDT 420
Query: 240 EKYIAAGYDAK 250
G A+
Sbjct: 421 SYATVNGEGAQ 431
>gi|417761549|ref|ZP_12409558.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|417776479|ref|ZP_12424317.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|418671929|ref|ZP_13233275.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
gi|409942630|gb|EKN88238.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|410573846|gb|EKQ36890.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|410581051|gb|EKQ48866.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
Length = 514
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RL++++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|183230651|ref|XP_651687.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
gi|169802835|gb|EAL46300.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
Length = 304
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 5/185 (2%)
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
F+ N++LGP+ + LG + I Q +RL++ ++LH GIIHL+ N+T + +
Sbjct: 88 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 147
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
+E+ + R +Y +SG G+ S + + VGASG+L G+ G + ++I
Sbjct: 148 GMIIERRWNSFRFLIVYFVSGIIGNCFSIICQPTS---IGVGASGSLLGIFGGFVVDIII 204
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
N + N+ LS++G ++ + G+D AH+ GF G + F LF Q
Sbjct: 205 NKKKFENR-VWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFIGGAICAFGLFAH-QNP 262
Query: 237 YVSEK 241
++++K
Sbjct: 263 WITKK 267
>gi|223994881|ref|XP_002287124.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976240|gb|EED94567.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 866
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G +L++ Q +RL++ ++LH GI HL+ N SL + +E+ FG +R YLLS
Sbjct: 559 GAKRSDLLLEGRQLHRLITPIFLHGGIGHLMANSYSLKSMGMNIERSFGRSRFVATYLLS 618
Query: 137 GFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA-NKCTSLSVLGSVI 195
G G+++S + +VGASGA+FGL+G + L N ++ + S L I
Sbjct: 619 GIMGNVVSAIQSPNP----AVGASGAIFGLVGAYYTFLSRNQDLFGYSGQRQKSALIETI 674
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGV 223
NL G + +DN HIGGF GV
Sbjct: 675 GFNLLLGMTNPM--IDNWGHIGGFIGGV 700
>gi|418695529|ref|ZP_13256548.1| peptidase, S54 family [Leptospira kirschneri str. H1]
gi|409956614|gb|EKO15536.1| peptidase, S54 family [Leptospira kirschneri str. H1]
Length = 514
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HA HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLLTNVFVHASFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFLRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN +HIGG G +LG ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|329938622|ref|ZP_08288018.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329302113|gb|EGG46005.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 303
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + Q YRLL++M+LH G H++ NM SL + LE+ G AR LYL+SG GS LS
Sbjct: 135 VAEGQYYRLLTAMFLHGGYAHIIFNMLSLWWLGAPLEKALGRARFLALYLVSGLAGSALS 194
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L + S+GASGA+FGL G A + + + +++ +NL F
Sbjct: 195 YLLAAANQP--SLGASGAIFGLFG-------ATAVLVRRLNYDMRPVIALLVINLVLTF- 244
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G G+ AHIGG +GV++G+ + P+
Sbjct: 245 -GWSGIAWEAHIGGLVAGVMIGYAMVHAPR 273
>gi|449017499|dbj|BAM80901.1| unknown rhomboid family protein [Cyanidioschyzon merolae strain
10D]
Length = 458
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+ G N +R + YRL + ++LH +HL+VN++SL + ++E +G R A LYLL
Sbjct: 277 MAGAKVNAAIRTGEWYRLFTPLFLHGNTLHLIVNLSSLKSLGPQIEATYGHRRYAALYLL 336
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIAN--WTIYANKCTSLSVLGS 193
SG G+L S + SVGAS A+FGL+G M + ++N W + L +
Sbjct: 337 SGLTGNLFSFFFNTAP----SVGASSAIFGLIGAMAAFYVSNTDWFGREHSHRVLRNIAW 392
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFAS----GVLLGFILFLRPQ 234
V LNL G P +DN H+GG GVL G L+L P+
Sbjct: 393 VTLLNLGQGLAP-ASRIDNFGHLGGLLGGAVFGVLFGPRLYLDPK 436
>gi|418710371|ref|ZP_13271142.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418725109|ref|ZP_13283785.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|409961491|gb|EKO25236.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|410769307|gb|EKR44549.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
Length = 514
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RL++++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 362 GANRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 421
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 422 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 478
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 479 GLLWGLF---GGIDNAAHIGGLVSGALSGIILF---QFG 511
>gi|418635278|ref|ZP_13197657.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
gi|374842000|gb|EHS05452.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
Length = 485
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 11/157 (7%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L D+GGL +V + YRL++SM+LH H+++NM SL + +E G ++ L
Sbjct: 185 LLDMGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMKMLIL 243
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y++SG G+ LS + + VS GASGA+FGL+G ++ +I +K S ++G
Sbjct: 244 YIISGLFGNFLSLSFN---TDTVSAGASGAIFGLIGAIIVMMI------ISKVYSRKMIG 294
Query: 193 S-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
+IAL + GF + V+ +AH+GGF SG+LL +I
Sbjct: 295 QLLIALVILIGFSLLLSNVNIMAHLGGFISGLLLIYI 331
>gi|451997902|gb|EMD90367.1| hypothetical protein COCHEDRAFT_1179059 [Cochliobolus
heterostrophus C5]
Length = 535
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 36 CPAKT---ADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYR 92
CP T ++ QC L ++ G P + ++ +D NQ +R
Sbjct: 230 CPNTTVITPNTPQCTLAELCGMGGGVPDQS------GVTNFKDRSH-------EPNQWWR 276
Query: 93 LLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKK 152
++ M+LHAG+IH+ NM + +E+E G R A +Y +G G +L +
Sbjct: 277 FITPMFLHAGVIHIGFNMLLQWTLGRDMEKEIGPLRFALVYFSAGIFGFVLG--GNYAPD 334
Query: 153 EIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDN 212
I SVG SG+LFG+L L +L+ NW+ + L + +A+ G +P G+DN
Sbjct: 335 GITSVGCSGSLFGILALTLLDLLYNWSTRRSPVKDLIFILLDMAIAFVIGLLP---GLDN 391
Query: 213 LAHIGGFASGVLLGFILFLRPQ 234
+HIGGF G++LG + P+
Sbjct: 392 FSHIGGFLMGLVLGICIIHSPE 413
>gi|291540429|emb|CBL13540.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Roseburia intestinalis XB6B4]
Length = 348
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
GG+ I +Q +R+ ++M++H G+ HLV NM V RLE+ G ++ +Y+LS
Sbjct: 191 GGMYPEFIQINHQWWRIFTAMFIHFGLPHLVNNMVIFCCVGSRLERAAGHFKMFVIYMLS 250
Query: 137 GFGGSLLS--CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
G GG LLS + + G VS GASGA+FG +G ++ +I + + +L +V
Sbjct: 251 GIGGGLLSYFMMLYSGDYA-VSAGASGAVFGTIGGLIWVVIRHRGRFKGLTVKGMILMAV 309
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
++L F I G+DN H+GG +G L+ IL+
Sbjct: 310 LSLYYGFSTI----GIDNWCHVGGILTGFLVAMILY 341
>gi|253682458|ref|ZP_04863255.1| putative rhomboid protease GluP [Clostridium botulinum D str. 1873]
gi|253562170|gb|EES91622.1| putative rhomboid protease GluP [Clostridium botulinum D str. 1873]
Length = 200
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G + N +V Q YRL++ M+LH G++HL++NM +L + +E+ +G + +YLL G
Sbjct: 50 GANENTLVASGQYYRLITCMFLHGGLMHLILNMYALNALGPIIEKSYGKNKYIIIYLLGG 109
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
S+ S + G VS+GASGA+F LLG +L I ++ K T +V+ SVI +
Sbjct: 110 LISSISSFIFSNG----VSIGASGAIFSLLGAILVLTIKMRSV-VGKDTIKNVI-SVIVV 163
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
N+ G + +DN AH+GG GV L +L
Sbjct: 164 NIFIGL--AIPNIDNFAHVGGLLGGVFLSILL 193
>gi|169615256|ref|XP_001801044.1| hypothetical protein SNOG_10784 [Phaeosphaeria nodorum SN15]
gi|111061058|gb|EAT82178.1| hypothetical protein SNOG_10784 [Phaeosphaeria nodorum SN15]
Length = 521
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P S + D R+ NQ +R + ++LHAGIIH+ NM + + +E+E G
Sbjct: 224 PDQSAVTDF----RDRSHEPNQWWRFIVPIFLHAGIIHIGFNMLLQLTLGRDMEKEIGPL 279
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R A +Y +G G +L + + SVGASG+LFG+L L +L+ W+ +
Sbjct: 280 RFALVYFSAGIFGFVLG--GNYAADGLSSVGASGSLFGILALTLLDLLYTWSTRRSPVKD 337
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
L L IA+ G +P G+DN +HIGGF G++LG L PQ
Sbjct: 338 LLFLLLDIAIAFVLGLLP---GLDNFSHIGGFLMGLVLGVCLLHSPQ 381
>gi|257413126|ref|ZP_04742087.2| integral membrane protein [Roseburia intestinalis L1-82]
gi|257204520|gb|EEV02805.1| integral membrane protein [Roseburia intestinalis L1-82]
Length = 366
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 89/160 (55%), Gaps = 11/160 (6%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
GG+ I +Q +R+ ++M++H G+ HLV NM V RLE+ G ++ +Y+LS
Sbjct: 209 GGMYPEFIQINHQWWRIFTAMFIHFGLPHLVNNMVIFFCVGSRLERAAGHFKMFVIYMLS 268
Query: 137 GFGGSLLS--CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
G GG LLS + + G VS GASGA+FG +G ++ +I + + L+V G +
Sbjct: 269 GIGGGLLSYFMMLYSGDYA-VSAGASGAVFGTIGGLIWVVIR----HRGRFEGLTVKGMI 323
Query: 195 I--ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ L+L +GF G+DN H+GG +G L IL+ +
Sbjct: 324 LMAVLSLYYGF--STIGIDNWCHVGGILTGFLAAMILYHK 361
>gi|354548360|emb|CCE45096.1| hypothetical protein CPAR2_701000 [Candida parapsilosis]
Length = 664
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Query: 69 SISTLRDLGGL---DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
S+S L L GL D NQ YR+ ++LHAG +H++ N+ + + +E+ G
Sbjct: 293 SLSELCGLSGLPTYDDGTKYAPNQWYRIFIPIFLHAGFLHIIFNLLLQLTMGASIERNIG 352
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIY 181
+ A +Y++SG G LL + + I S GASGALFG++ T + I N +Y
Sbjct: 353 ILKYAIIYIVSGISGFLLGA--NFTPQGIASTGASGALFGIVATNIILFIYAGRKNTNMY 410
Query: 182 ANKCTSLSVLGSV--IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
L + + I ++L G +P G+DN +H+GGFA G+L +L P
Sbjct: 411 GTTHYKLFIFFMICEIIISLVLGLLP---GLDNFSHLGGFAMGILTAVLLLKDP 461
>gi|416361193|ref|ZP_11682501.1| rhomboid family membrane protein [Clostridium botulinum C str.
Stockholm]
gi|338194390|gb|EGO86853.1| rhomboid family membrane protein [Clostridium botulinum C str.
Stockholm]
Length = 200
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G + N +V Q YRL++ M+LH G++HL++NM +L + +E+ +G + +YLL G
Sbjct: 50 GANENTLVASGQYYRLITCMFLHGGLMHLILNMYALNALGPIIEKSYGKNKYIIIYLLGG 109
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
S+ S + G VS+GASGA+F LLG +L I ++ K T +V+ SVI +
Sbjct: 110 LISSISSFIFSNG----VSIGASGAIFSLLGAILVLTIKMRSVVG-KDTIKNVI-SVIVV 163
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
N+ G + +DN AH+GG GV L +L
Sbjct: 164 NIFIGL--AIPNIDNFAHVGGLLGGVFLSILL 193
>gi|309805213|ref|ZP_07699265.1| peptidase, S54 family [Lactobacillus iners LactinV 09V1-c]
gi|308165447|gb|EFO67678.1| peptidase, S54 family [Lactobacillus iners LactinV 09V1-c]
Length = 232
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+ L D G ++ +V K Q +RL ++ ++HAG H++ N+ + LEQ G R
Sbjct: 41 DINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG GG+LLS G+ ++S GAS A+FGL+G++L+ N
Sbjct: 101 YLTIYLLSGVGGNLLS--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGR 158
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+I + F+P VD + HIGG +G LL IL
Sbjct: 159 QAFLLLICNIVVDFFMPSVDII---GHIGGTITGFLLTIIL 196
>gi|221057219|ref|XP_002259747.1| rhomboid protease [Plasmodium knowlesi strain H]
gi|193809819|emb|CAQ40523.1| rhomboid protease, putative [Plasmodium knowlesi strain H]
Length = 664
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
LGGL+ N I + YRL S++LH G +H++ N+ + + + +E ++GF R L+ +
Sbjct: 350 LGGLNTNYIRNYGEIYRLFWSVYLHGGFMHIIFNVLCQIQILWMIEPDWGFLRTLLLFFI 409
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG G+LLS + V++G+SG+L+GL+G + + I W C+ L + VI
Sbjct: 410 SGVTGNLLSAVCDPCG---VTIGSSGSLYGLIGALFTYHIEYWKTIPRPCSVLIFMVIVI 466
Query: 196 ALNLA---FGFIPGVDGVDNLAHIGGFASGVLLGF 227
+ FG+ DN AH+GG G+L GF
Sbjct: 467 IFGIFIGMFGY------TDNYAHMGGCLGGILYGF 495
>gi|315653611|ref|ZP_07906531.1| membrane-associated serine protease [Lactobacillus iners ATCC
55195]
gi|315488973|gb|EFU78615.1| membrane-associated serine protease [Lactobacillus iners ATCC
55195]
Length = 232
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+ L D G ++ +V K Q +RL ++ ++HAG H++ N+ + LEQ G R
Sbjct: 41 DINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG GG+LLS G+ ++S GAS A+FGL+G++L+ N
Sbjct: 101 YLTIYLLSGVGGNLLS--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGR 158
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+I + F+P VD + HIGG +G LL IL
Sbjct: 159 QAFLLLICNIVVDFFMPSVDII---GHIGGTITGFLLTIIL 196
>gi|119482167|ref|XP_001261112.1| S54 (rhomboid) family peptidase, putative [Neosartorya fischeri
NRRL 181]
gi|119409266|gb|EAW19215.1| S54 (rhomboid) family peptidase, putative [Neosartorya fischeri
NRRL 181]
Length = 524
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 10/164 (6%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
NQ +R + M+LH GIIH+ N+ M ++ +E+ G+ R A +YL SG G +L
Sbjct: 253 EPNQWFRFIIPMFLHTGIIHIGFNLLVQMTMAADMERTVGWWRFAFVYLASGIWGFVLGG 312
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
++ + E S G SG+LFG+L + +L+ W ++ L ++ IA++ G +P
Sbjct: 313 -NYAAQGE-SSCGCSGSLFGILALYILDLLYTWGERSSPWAELVIMVLGIAISFVLGLLP 370
Query: 206 GVDGVDNLAHIGGFASGVLLGFILF-----LRPQYGYVSEKYIA 244
G+DN +HIGGF G+ G + LR + G Y+A
Sbjct: 371 ---GLDNFSHIGGFVMGLASGLCIMRSPNALRERIGLARNPYVA 411
>gi|149181994|ref|ZP_01860480.1| hypothetical protein BSG1_06322 [Bacillus sp. SG-1]
gi|148850259|gb|EDL64423.1| hypothetical protein BSG1_06322 [Bacillus sp. SG-1]
Length = 485
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +R + + +H G +H+++N +L + +E+ FG AR +YL +G
Sbjct: 189 GAKYNPLIVDGEWWRFFTPIVIHIGFLHMLMNTFALYFLGPAVERIFGSARFLFIYLFAG 248
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
F G+L S + + +S GASGA+FG G +L A+ I+ + ++L VI +
Sbjct: 249 FSGTLASFVFNDS----LSAGASGAIFGCFGALLYFGTAHPKIFF-RTMGTNIL-VVIGI 302
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
NLAFGF + G+DN HIGG A G L I+ L
Sbjct: 303 NLAFGFT--IPGIDNAGHIGGLAGGALSAAIVHL 334
>gi|255526224|ref|ZP_05393142.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296185575|ref|ZP_06853984.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
gi|255510064|gb|EET86386.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296049703|gb|EFG89128.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
Length = 323
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 20/164 (12%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + YRL++ M+LH GI+HL++NM +L + +E+ +G R +Y LSG
Sbjct: 174 GAKVNYLIARGEYYRLITCMFLHGGIMHLLLNMFALYSLGPFIEKIYGKTRYLIIYFLSG 233
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS------LSVL 191
S+ S + VS+GASGA+FGLLG L I+A K ++ +
Sbjct: 234 IVSSIFSYMFSTA----VSIGASGAIFGLLGAAL--------IFAMKMKDRIGRGFITNI 281
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
SVI +NL GF + VDN H+GG G + +L + +Y
Sbjct: 282 VSVIFINLFMGF--SMSNVDNFGHLGGLIGGSAITLLLGIGKRY 323
>gi|421131221|ref|ZP_15591405.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
gi|410357472|gb|EKP04727.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
Length = 447
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 295 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 354
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 355 LCGSLASIVWYPNT---ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 411
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN +HIGG G +LG ILF Q+G
Sbjct: 412 GLLWGLF---GGIDNASHIGGLVGGTILGIILF---QFG 444
>gi|340502586|gb|EGR29263.1| rhomboid family protein, putative [Ichthyophthirius multifiliis]
Length = 305
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 61 KENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
K+ LL I L + G + I +K Q +RL ++M+LH IH++ N S ++ +
Sbjct: 96 KQGQLLEIRIDVLDEFGANNAQKIQQKYQLWRLFTAMFLHLNFIHILFNSVSAFILVSVM 155
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E +G + +Y+LSG GG+L + + I+S GAS +L G+L +S ++ NW
Sbjct: 156 EYTYGTLYVIIIYILSGIGGNLFTDMFS--SVIIISAGASTSLMGMLALFVSYMVLNWKS 213
Query: 181 --YANKCTSLSVLGSVIALNLAFGFIPGV---DGVDNLAHIGGFASGVLLGFIL---FLR 232
+ + + V + I + F G GVDN H+GGF +G+L G + F +
Sbjct: 214 LEFTGQLRCMFVCITTIIIIWVFLLSSGFSTKSGVDNFGHLGGFITGLLAGICIPKPFQQ 273
Query: 233 PQYGYVSEKYIAAG 246
Y + K+I+ G
Sbjct: 274 TDYE-MKAKFISGG 286
>gi|68479248|ref|XP_716303.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
gi|46437969|gb|EAK97307.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
Length = 669
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ ++LHAG +H++ N+ + + +E+ G + A +Y+ SG GG LL
Sbjct: 307 DQWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIGIIKYAIIYISSGIGGFLLGA-- 364
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIYANKCTSL--SVLGSVIALNLAF 201
+ + I S GASGALFG++ T + I N +Y K +L ++ I ++L
Sbjct: 365 NFTPQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVL 424
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
G +P G+DN +HIGGFA G+L ++ P
Sbjct: 425 GLLP---GLDNFSHIGGFAMGILSSIVVLKDP 453
>gi|455791418|gb|EMF43234.1| peptidase, S54 family [Leptospira interrogans serovar Lora str. TE
1992]
Length = 156
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL+++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 4 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 63
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 64 LCGSLASIVWY---PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 120
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 121 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 153
>gi|154249662|ref|YP_001410487.1| rhomboid family protein [Fervidobacterium nodosum Rt17-B1]
gi|154153598|gb|ABS60830.1| Rhomboid family protein [Fervidobacterium nodosum Rt17-B1]
Length = 224
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+++ Q YR++++M++H G +HL NM +L ++ E +G R Y ++G G++
Sbjct: 47 LIKSGQWYRIITAMFMHGGFLHLAFNMYALYIIGNYAEGIYGTYRFITYYFITGIVGNVA 106
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
+ + + G +SVGASGA+FGL+G + T + K + S L +I +N+ GF
Sbjct: 107 THIFYYGS---LSVGASGAIFGLVGVLFGAGFRKDTPFFLKPITGSALLPMIVINVVLGF 163
Query: 204 IPGVDGVDNLAH 215
IPG G++N AH
Sbjct: 164 IPG-SGINNAAH 174
>gi|238878377|gb|EEQ42015.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 669
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ ++LHAG +H++ N+ + + +E+ G + A +Y+ SG GG LL
Sbjct: 307 DQWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIGIIKYAIIYISSGIGGFLLGA-- 364
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIYANKCTSL--SVLGSVIALNLAF 201
+ + I S GASGALFG++ T + I N +Y K +L ++ I ++L
Sbjct: 365 NFTPQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVL 424
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
G +P G+DN +HIGGFA G+L ++ P
Sbjct: 425 GLLP---GLDNFSHIGGFAMGILSSIVVLKDP 453
>gi|372325402|ref|ZP_09519991.1| GlpG-like protein [Oenococcus kitaharae DSM 17330]
gi|366984210|gb|EHN59609.1| GlpG-like protein [Oenococcus kitaharae DSM 17330]
Length = 234
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 100/191 (52%), Gaps = 15/191 (7%)
Query: 58 QPWKENYLL-----GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTS 112
QP YL+ GPSI +L LGG +L + + YR + ++LHA ++H+ NM +
Sbjct: 27 QPVSVFYLVSRFINGPSIQSLVLLGGGVDSLFM-SGEWYRAFTPIFLHASLMHIFSNMLT 85
Query: 113 LMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS 172
L++V +E+ FG + +YL++G G+LL+ + +VSVGASGALFGL G M
Sbjct: 86 LVIVGPFVEKLFGKGKFLLIYLITGVWGNLLTFIFDP-NPNVVSVGASGALFGLFGVM-- 142
Query: 173 ELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVD--GVDNLAHIGGFASGVLLGFIL- 229
+++ W N ++ + A F I ++ VD AHIGG SG LL I
Sbjct: 143 -IVSGWYNRNNFVFRRQLI--IFAALAVFNLIGNLNDPSVDIWAHIGGLISGSLLAIIFD 199
Query: 230 FLRPQYGYVSE 240
F YG + +
Sbjct: 200 FPTSVYGRIKQ 210
>gi|325912121|ref|ZP_08174519.1| peptidase, S54 family [Lactobacillus iners UPII 143-D]
gi|325476071|gb|EGC79239.1| peptidase, S54 family [Lactobacillus iners UPII 143-D]
Length = 232
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+ L D G ++ +V K Q +RL ++ ++HAG H++ N+ + LEQ G R
Sbjct: 41 DINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG GG+LLS G+ ++S GAS A+FGL+G++L+ N
Sbjct: 101 YLTIYLLSGVGGNLLS--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGR 158
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+I + F+P VD + HIGG +G LL IL
Sbjct: 159 QAFLLLICNIVVDFFMPSVDII---GHIGGTITGFLLTIIL 196
>gi|312872929|ref|ZP_07732989.1| peptidase, S54 family [Lactobacillus iners LEAF 2062A-h1]
gi|311091451|gb|EFQ49835.1| peptidase, S54 family [Lactobacillus iners LEAF 2062A-h1]
Length = 232
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+ L D G ++ +V K Q +RL ++ ++HAG H++ N+ + LEQ G R
Sbjct: 41 DINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG GG+LLS G+ ++S GAS A+FGL+G++L+ N
Sbjct: 101 YLTIYLLSGVGGNLLS--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGR 158
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+I + F+P VD + HIGG +G LL IL
Sbjct: 159 QAFLLLICNIVVDFFMPSVDII---GHIGGTITGFLLTIIL 196
>gi|152993649|ref|YP_001359370.1| hypothetical protein SUN_2072 [Sulfurovum sp. NBC37-1]
gi|151425510|dbj|BAF73013.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 192
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+ L D+G L L V K + +RL ++M+LH G+ H+++NM SL ++ +E F
Sbjct: 2 DMQVLVDMGALYGPLTVLKGEWWRLFTAMFLHGGMTHILMNMVSLYIIGRGMEMYFDTKS 61
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS- 187
+YL SG G L+S H V +GASGA+FG+ G + IA+ +
Sbjct: 62 YLSIYLFSGLLGGLVSLYIHPAS---VGIGASGAIFGVFGALAGFFIAHRKHLGKHTKAF 118
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
+ +I +NL GF + VD AH+ G G + G++L P++
Sbjct: 119 MKEFTVIIVINLVIGF--SIPNVDVSAHVAGTVVGFIGGYLLSKDPKF 164
>gi|68479117|ref|XP_716364.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
gi|46438031|gb|EAK97368.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
Length = 669
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 11/152 (7%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YR+ ++LHAG +H++ N+ + + +E+ G + A +Y+ SG GG LL
Sbjct: 307 DQWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIGIIKYAIIYISSGIGGFLLGA-- 364
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIYANKCTSL--SVLGSVIALNLAF 201
+ + I S GASGALFG++ T + I N +Y K +L ++ I ++L
Sbjct: 365 NFTPQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVL 424
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
G +P G+DN +HIGGFA G+L ++ P
Sbjct: 425 GLLP---GLDNFSHIGGFAMGILSSIVVLKDP 453
>gi|296416368|ref|XP_002837852.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633736|emb|CAZ82043.1| unnamed protein product [Tuber melanosporum]
Length = 551
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 75 DLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYL 134
DLGG + NQ YR ++ ++LHAG+IH+ NM + + +E++ G R A +Y
Sbjct: 261 DLGGAAQ-AGSEPNQWYRFITPIFLHAGLIHIAFNMLVQLKLGTEMERDIGHLRFAIVYF 319
Query: 135 LSG-----FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS 189
+G FGG+ G+ S G SG+LFG+ ML +L+ W + L+
Sbjct: 320 AAGIFGFVFGGNFAP----NGQP---STGCSGSLFGIFALMLLDLLWTWGSRKSPKKDLA 372
Query: 190 VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
L I + G +P G+DN +HIGGF G+ LG + P
Sbjct: 373 FLLVEIIICFVIGLLP---GLDNFSHIGGFLMGLFLGLTVLHSP 413
>gi|378726481|gb|EHY52940.1| hypothetical protein HMPREF1120_01142 [Exophiala dermatitidis
NIH/UT8656]
Length = 524
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
NQ +R + M+LHAG++H+ N+ + ++ +E+ G R A +Y SG G +L
Sbjct: 235 NQWFRFIVPMFLHAGLVHIAFNLMLQLTMAREMEKAIGSIRFALVYFSSGIFGFVLG--G 292
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ I S GASG LFG+L L +LI W + L + + ++ G +P
Sbjct: 293 NFAASAIASTGASGCLFGVLALTLLDLIYGWNERRSPVRELMWILVDVLISFVLGLLP-- 350
Query: 208 DGVDNLAHIGGFASGVLLGFILF-----LRPQYGYVS-EKYIAAGYDAKHRQPK 255
G+DN +HIGGF G+ +G + LR + G VS Y G + PK
Sbjct: 351 -GLDNFSHIGGFLMGLAMGICILHSPNILRKRNGEVSAAPYRNVGSEPDISNPK 403
>gi|346974557|gb|EGY18009.1| rhomboid family membrane protein [Verticillium dahliae VdLs.17]
Length = 567
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 9/170 (5%)
Query: 69 SISTLRDLGGL----DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
S+ L GG+ D N NQ +R ++ ++LHAG+IH+ VNM M + +E
Sbjct: 289 SLGELCGFGGVPNPQDPNEKGEPNQWFRFITPIFLHAGLIHIGVNMLLQMTIGKEMEMAI 348
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G R +Y +G G+++ ++ G E S GASGALFG++ +L +W +
Sbjct: 349 GPVRFFLVYFSAGIFGNVMGA-NYAGTGE-ASTGASGALFGIIALTALDLAYSWKDRRHP 406
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
L + + + G +P G+DN AHIGGF G+ LG + P
Sbjct: 407 VKDLMFVLLDVVICFVLGLLP---GLDNFAHIGGFLMGLCLGICVLHSPN 453
>gi|212555202|gb|ACJ27656.1| Rhomboid-like protein [Shewanella piezotolerans WP3]
Length = 360
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ + D + +L+++ Q LLS M+LH IIHL+ NM L +V LE G A
Sbjct: 173 PATVWVFDHFAMQPSLVMQGEQVMPLLSHMFLHGDIIHLLGNMYFLYVVGDNLEDALGHA 232
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML-----SELIANWTIYA 182
R +YLL GF + + I VGASGA+ GL G L + L + IY
Sbjct: 233 RFLAVYLLCGFAAAFAQ-IASDPTSAIFMVGASGAIAGLFGMYLLWFRHASLTFMFVIYQ 291
Query: 183 NKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
K + + + +NL FG GV AHIGGF +G+++G +L R
Sbjct: 292 KKLSPMVFFAIWLLINL-FGAWAAQGGVAYWAHIGGFIAGLIIGLLLKAR 340
>gi|149239566|ref|XP_001525659.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451152|gb|EDK45408.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 797
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
Query: 70 ISTLRDLGGL------DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
+ +L DL GL D NQ YR+ ++LHAG +H+ N+ + + +E+
Sbjct: 384 VCSLNDLCGLSGIPTFDDGTKFAPNQWYRIFIPIFLHAGFLHIFFNLLLQLTMGASIERN 443
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI----ANWT 179
G + A +Y++SG G LL + + I S GASGALFG++ T + I N
Sbjct: 444 IGILKYALIYIMSGIAGFLLGA--NFTPQGIASTGASGALFGVVATNIILFIYTGRKNTN 501
Query: 180 IYANKCTSLSV--LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
+Y K L + + I ++ G +P G+DN +H+GGFA G+L +L P
Sbjct: 502 MYGTKHYKLFIFFMFCEIVISFVLGLLP---GLDNFSHLGGFAMGILSAILLLKDP 554
>gi|456972143|gb|EMG12595.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 226
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RL++++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 74 GANRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 133
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 134 LCGSLASIVWY---PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 190
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 191 GLLWGLF---GGIDNAAHIGGLVSGALSGIILF---QFG 223
>gi|18463968|gb|AAL73049.1| C16ORF8 [Sphoeroides nephelus]
Length = 773
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 24/190 (12%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +Y++SG G+L S +
Sbjct: 569 DQFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIF 628
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + + L V+ AFG +P
Sbjct: 629 LPYRAE---VGPAGSQFGILACLFVELFQSWQILAQPWRAFTKLLCVVLFLFAFGLLP-- 683
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
+DN AHI GF SG L F YI+ G + Y++ C II
Sbjct: 684 -WIDNFAHISGFISGFFLSFAFL----------PYISFG--------RMDLYRKRCQIIV 724
Query: 268 LILLVLGYIT 277
+L+ +G +
Sbjct: 725 FLLVFVGLFS 734
>gi|312871798|ref|ZP_07731886.1| peptidase, S54 family [Lactobacillus iners LEAF 3008A-a]
gi|312875588|ref|ZP_07735589.1| peptidase, S54 family [Lactobacillus iners LEAF 2053A-b]
gi|311088842|gb|EFQ47285.1| peptidase, S54 family [Lactobacillus iners LEAF 2053A-b]
gi|311092740|gb|EFQ51096.1| peptidase, S54 family [Lactobacillus iners LEAF 3008A-a]
Length = 232
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+ L D G ++ +V K Q +RL ++ ++HAG H++ N+ + LEQ G R
Sbjct: 41 DINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG GG+LLS G+ ++S GAS A+FGL+G++L+ N
Sbjct: 101 YLTIYLLSGVGGNLLS--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGR 158
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+I + F+P VD + HIGG +G LL IL
Sbjct: 159 QAFLLLICNIVVDFFMPSVDII---GHIGGTITGFLLTIIL 196
>gi|259500554|ref|ZP_05743456.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|302191244|ref|ZP_07267498.1| membrane-associated serine protease [Lactobacillus iners AB-1]
gi|259167938|gb|EEW52433.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
Length = 232
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+ L D G ++ +V K Q +RL ++ ++HAG H++ N+ + LEQ G R
Sbjct: 41 DINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG GG+LLS G+ ++S GAS A+FGL+G++L+ N
Sbjct: 101 YLTIYLLSGVGGNLLS--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGR 158
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+I + F+P VD + HIGG +G LL IL
Sbjct: 159 QAFLLLICNIVVDFFMPSVDII---GHIGGTITGFLLTIIL 196
>gi|345100279|gb|AEN69415.1| rhomboid-like protease 4 [Eimeria tenella]
Length = 558
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ L GGL+ N I + +R+ S+M+LH G +H+ +N+ + + LE ++GF
Sbjct: 236 PNSRILTAFGGLETNYIRNYGEVFRVFSAMYLHGGFLHIAINLLCQIQSLWMLEPDWGFW 295
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R A L+ + G G+LLS + ++VG+SGA++ L+G ++ + W C
Sbjct: 296 RTALLFFVGGISGNLLSAVADPCN---ITVGSSGAMYSLMGALIPYCVEYWKTIPRPCCI 352
Query: 188 LSVLGSVIALNLAFGFIPGVDG-VDNLAHI 216
L V L G + G+ G DN AHI
Sbjct: 353 LMFFIVV----LLIGIVTGLSGFTDNYAHI 378
>gi|309810248|ref|ZP_07704093.1| peptidase, S54 family [Lactobacillus iners SPIN 2503V10-D]
gi|312874222|ref|ZP_07734256.1| peptidase, S54 family [Lactobacillus iners LEAF 2052A-d]
gi|308169520|gb|EFO71568.1| peptidase, S54 family [Lactobacillus iners SPIN 2503V10-D]
gi|311090292|gb|EFQ48702.1| peptidase, S54 family [Lactobacillus iners LEAF 2052A-d]
Length = 232
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+ L D G ++ +V K Q +RL ++ ++HAG H++ N+ + LEQ G R
Sbjct: 41 DINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHVICNIVMIYFFGMYLEQFLGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG GG+LLS G+ ++S GAS A+FGL+G++L+ N
Sbjct: 101 YLTIYLLSGVGGNLLS--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGR 158
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+I + F+P VD + HIGG +G LL IL
Sbjct: 159 QAFLLLICNIVVDFFMPSVDII---GHIGGTITGFLLTIIL 196
>gi|291537195|emb|CBL10307.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Roseburia intestinalis M50/1]
Length = 348
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
GG+ I +Q +R+ ++M++H G+ HLV NM V RLE+ G ++ +Y+LS
Sbjct: 191 GGMYPEFIQINHQWWRIFTAMFIHFGLPHLVNNMVIFCCVGSRLERAAGHFKMFVIYMLS 250
Query: 137 GFGGSLLS--CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
G GG LLS + + G VS GASGA+FG +G ++ +I + + +L +V
Sbjct: 251 GIGGGLLSYFMMLYSGDYA-VSAGASGAVFGTIGGLIWVVIRHRGRFKGLTVKGMILMAV 309
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
++L F I G+DN H+GG +G L IL+
Sbjct: 310 LSLYYGFSTI----GIDNWCHVGGILTGFLAAMILY 341
>gi|325912656|ref|ZP_08175039.1| peptidase, S54 family [Lactobacillus iners UPII 60-B]
gi|325478077|gb|EGC81206.1| peptidase, S54 family [Lactobacillus iners UPII 60-B]
Length = 232
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+ L D G ++ +V K Q +RL ++ ++HAG H++ N+ + LEQ G R
Sbjct: 41 DINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG GG+LLS G+ ++S GAS A+FGL+G++L+ N
Sbjct: 101 YLTIYLLSGVGGNLLS--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGR 158
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+I + F+P VD + HIGG +G LL IL
Sbjct: 159 QAFLLLICNIVVDFFMPSVDII---GHIGGTITGFLLTIIL 196
>gi|395532997|ref|XP_003768550.1| PREDICTED: inactive rhomboid protein 2 [Sarcophilus harrisii]
Length = 827
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAG+ H +V++ M + LE+ G+ RIA +++LSG G+L S +
Sbjct: 622 DQFYRLWLSLFLHAGLGHCLVSVLFQMTILRDLEKLAGWLRIAIIFILSGITGNLASAIF 681
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + ELI +W + + L ++ G +P
Sbjct: 682 LPYRAE---VGPAGSQFGILACLFVELIQSWQLLEKPWKAFLNLSGIVFFLFICGLLP-- 736
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQ 253
+DN+AHI GF SG+LL F YI G K+R+
Sbjct: 737 -WIDNIAHIFGFLSGLLLSFAFL----------PYITFGTGDKYRK 771
>gi|392573734|gb|EIW66872.1| hypothetical protein TREMEDRAFT_34153 [Tremella mesenterica DSM
1558]
Length = 528
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 4/145 (2%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+Q +R + ++LH GIIHL++NM + + + ++E+E G +Y+ G G +L
Sbjct: 305 EPDQSWRFVLPIFLHVGIIHLLLNMAAQVTIGAQIEREMGTIPFLMVYMAGGIYGFVLG- 363
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ + I SVGASGALF + + +L +W +L + +A G+IP
Sbjct: 364 -GNFSRTGIPSVGASGALFAINACVTVDLGLHWKYEPRPKLKAFLLLIEFCVGIAIGYIP 422
Query: 206 GVDGVDNLAHIGGFASGVLLGFILF 230
+ VD LAH+GGFA G+L+G IL+
Sbjct: 423 --NAVDGLAHLGGFAMGLLMGIILY 445
>gi|328773737|gb|EGF83774.1| hypothetical protein BATDEDRAFT_3368, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 293
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+Q +R + LH GI+H++ NM+ + +LE++ G+ R+A +Y+ SG
Sbjct: 102 HPDQWFRFFVPIMLHGGIVHILFNMSFQLQTGLQLEKDMGWWRMALIYIGSGV--GGFVF 159
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ SVGASG+L+G++ +L +LI NW++ L + I +L G +P
Sbjct: 160 GASLSDVRVPSVGASGSLYGMVACLLLDLIQNWSLIKRPWIELLKMVGNIIFSLLLGMLP 219
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
+DNLAH+GGF +G+ LG + + +G ++
Sbjct: 220 ---YIDNLAHVGGFITGICLGILFMPKIYFGKWDKR 252
>gi|326430116|gb|EGD75686.1| hypothetical protein PTSG_07804 [Salpingoeca sp. ATCC 50818]
Length = 855
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L D GL +Q YR +++LHAG IHL V + + +E+ G+ R+A +
Sbjct: 629 LEDKCGLSPFARNAPDQWYRFFLAIFLHAGGIHLFVVLLLQFSLLPDVERIAGWWRVAFI 688
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y++SG GG ++S L + + V+VGASGA FG+L ++ EL+ +W + L+ L
Sbjct: 689 YMISGAGGFVISGLFSRYQ---VTVGASGANFGILAALVVELVQSWKFIERPGSELAKLI 745
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
+I L A G +P VDN +HIGGF G+L
Sbjct: 746 VIIVLAFAIGILP---YVDNYSHIGGFLFGML 774
>gi|344302219|gb|EGW32524.1| hypothetical protein SPAPADRAFT_61590 [Spathaspora passalidarum
NRRL Y-27907]
Length = 555
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 79 LDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGF 138
+++N + +Q YR+ ++LHAG +H++ N+ + + +E+ G + A +Y+ SG
Sbjct: 197 IEKNAFI-PDQWYRIFIPIFLHAGFLHIIFNLLLQVTMGGSIERNIGILKYAIIYIASGI 255
Query: 139 GGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIYANKCTSLSVLGSV 194
G LL + I S GASGALFG++ T + + N +Y K +L + +
Sbjct: 256 AGFLLGA--NFTPVGIASTGASGALFGIVATNMILFVYTGKKNTNMYGTKHYTLFIFIMI 313
Query: 195 --IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
I ++ G +P G+DN +HIGGFA G+L+ + P + YV
Sbjct: 314 GEIVVSFVLGLLP---GLDNFSHIGGFAMGILMAIVFLKDPYWVYVD 357
>gi|160935902|ref|ZP_02083276.1| hypothetical protein CLOBOL_00795 [Clostridium bolteae ATCC
BAA-613]
gi|158441144|gb|EDP18861.1| hypothetical protein CLOBOL_00795 [Clostridium bolteae ATCC
BAA-613]
Length = 206
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 9/159 (5%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + YRL ++M+LH G+ HL NM L+++ ++E+ G + YL SG + +
Sbjct: 50 VILGGEYYRLFTAMFLHFGVSHLANNMLVLLVLGEKMERALGHIKYLIFYLASGVAANSI 109
Query: 144 S-CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS--VLGSVIALNLA 200
S + + + VS GASGA+FG++G L+ I+ + L+ LG ++ L L
Sbjct: 110 SLAVQVRTGQASVSAGASGAIFGVVGG----LVYVIAIHHGQLDGLTNRQLGFMVLLTLY 165
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
GF GVDN+AHIGG SG +LG +L+ R +S
Sbjct: 166 HGFTSA--GVDNMAHIGGLISGFILGILLYRRKDAARIS 202
>gi|225026638|ref|ZP_03715830.1| hypothetical protein EUBHAL_00889 [Eubacterium hallii DSM 3353]
gi|224956008|gb|EEG37217.1| peptidase, S54 family [Eubacterium hallii DSM 3353]
Length = 343
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G +D +V K+Q YRL +SM+LH G HL+ NM L+++ RLE+ G +Y+ +
Sbjct: 185 GAIDWMDVVEKHQYYRLFTSMFLHFGADHLLQNMLILLVIGCRLERITGKLSYLLIYIGA 244
Query: 137 GFGGSLLSCLHHKGKK-EIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG--- 192
G G+ S + G VS GASGA+FG++G +L +I++ I K + +G
Sbjct: 245 GLIGAGTSIIFTLGNNPNTVSAGASGAIFGVMGGLLYCIISD--IIQKKRHRVEEIGLTG 302
Query: 193 --SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
++A L++GF G+DN AHIGG G L+ I
Sbjct: 303 MIFMVASALSYGFFS--TGIDNAAHIGGLVGGFLITMI 338
>gi|396485661|ref|XP_003842225.1| similar to rhomboid family membrane protein [Leptosphaeria maculans
JN3]
gi|312218801|emb|CBX98746.1| similar to rhomboid family membrane protein [Leptosphaeria maculans
JN3]
Length = 549
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 81 RNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGG 140
R+ NQ +R + ++LHAG+IH+ NM + + +E+E G R +Y +G G
Sbjct: 263 RDRSREPNQWWRFIVPIFLHAGLIHIGFNMLLQLTLGRDMEKEIGPLRFTLVYFAAGIFG 322
Query: 141 SLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLA 200
+L + + SVGASG+LFG+L L +L+ NW+ + L L +A+
Sbjct: 323 FVLG--GNYAADGLASVGASGSLFGILALTLLDLLYNWSTRRSPVKDLLFLLLDVAIAFV 380
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G +P G+DN +HIGGF G++LG L P+
Sbjct: 381 LGLLP---GLDNFSHIGGFLMGLVLGICLLHSPE 411
>gi|47220058|emb|CAG12206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 894
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGI+H +V++ M + LE+ G+ RI+ +Y++SG G+L S +
Sbjct: 690 DQFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIF 749
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L V+ AFG +P
Sbjct: 750 LPYRAE---VGPAGSQFGILACLFVELFQSWQILAQPWRAFIKLLCVVLFLFAFGLLP-- 804
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+DN AHI GF SG L F +G
Sbjct: 805 -WIDNFAHICGFISGFFLSFAFLPYISFG 832
>gi|354557489|ref|ZP_08976747.1| Peptidase S54, rhomboid domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353550283|gb|EHC19720.1| Peptidase S54, rhomboid domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 325
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
L G N ++ + Q +RL +SM++H G +HL N+ +L ++ E+ FG R +YLL
Sbjct: 179 LFGAKVNELILQGQVWRLFTSMFIHIGFLHLAFNIYALWILGSFSEERFGRWRFLFIYLL 238
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG GS+ S L + +S GASGA+FG+LG ++ N ++ + V+ +I
Sbjct: 239 SGLAGSVTSFLF----TDALSAGASGAIFGILGALVPYSWKNPRLWKSGFGKNLVV--II 292
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
A+NL G I +D AH+GG G+ +GF+
Sbjct: 293 AINLGIGLIQ--PQIDIYAHLGGLLIGLAIGFLF 324
>gi|353234818|emb|CCA66839.1| related to membrane protein [Piriformospora indica DSM 11827]
Length = 577
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 15/150 (10%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
NQ +R ++ ++LHAGIIH ++NM + ++S ++E+E G LY G G++L
Sbjct: 365 EPNQWFRFITPIFLHAGIIHFLLNMFAQWVLSGQVEREMGSIGFFILYFACGVFGNILG- 423
Query: 146 LHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNL--A 200
G +V SVGASGA+ G L + +LIA+W I L +G +I L L
Sbjct: 424 ----GNFALVGQPSVGASGAIVGTLAVLWVDLIAHWGIEYKPVQKL--IGHIINLVLVVG 477
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
G+IP GVDN +H+GG G++ G IL
Sbjct: 478 MGYIP---GVDNFSHLGGLLMGLITGIILL 504
>gi|291521749|emb|CBK80042.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Coprococcus catus GD/7]
Length = 211
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I+ +++ YRLL+ ++H GI HL NM L + LE+ G + +YL +G G S +
Sbjct: 57 IIEEHEYYRLLTCTFIHFGISHLFNNMLVLAYIGDNLERALGKFKYLIVYLAAGVGSSAV 116
Query: 144 SCLHHKGKKEI-VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAF 201
S + K E VS GASGA+FG++G +L +I N L L S + L F
Sbjct: 117 SAVWSMIKDEYSVSGGASGAIFGVVGALLVIVIRN-------RGQLEDLNSRQLMLFAGF 169
Query: 202 GFIPGVD--GVDNLAHIGGFASGVLLGFILFLRPQY 235
GV G+DN+AHI GF G LLG +L+ R +Y
Sbjct: 170 SIYHGVTSAGIDNMAHISGFVIGALLGGLLYRRKRY 205
>gi|418630551|ref|ZP_13193032.1| peptidase, S54 family [Staphylococcus epidermidis VCU128]
gi|374837741|gb|EHS01304.1| peptidase, S54 family [Staphylococcus epidermidis VCU128]
Length = 486
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTS 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + GF +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|367037003|ref|XP_003648882.1| hypothetical protein THITE_2106847 [Thielavia terrestris NRRL 8126]
gi|346996143|gb|AEO62546.1| hypothetical protein THITE_2106847 [Thielavia terrestris NRRL 8126]
Length = 516
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
NQ +R ++ +++HAG+IH+ NM + + +E+ G R +Y+ +G G +L
Sbjct: 272 PNQWFRFITPIFMHAGVIHIGFNMLLQLTLGRDMEKSIGSIRFFLVYMSAGIFGFVLGG- 330
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPG 206
+ I S GASGALFG++ L +L+ +W N L+ + + ++ G +P
Sbjct: 331 -NFAATGIASTGASGALFGIIALTLLDLLYSWRDRVNPVRDLAFIVLDVVISFVLGLLP- 388
Query: 207 VDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G+DN +HIGGF G+ LG + P
Sbjct: 389 --GLDNFSHIGGFLMGLALGICVLHSPN 414
>gi|388506462|gb|AFK41297.1| unknown [Lotus japonicus]
Length = 136
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 70/105 (66%), Gaps = 6/105 (5%)
Query: 170 MLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
ML+ELI NWTIY+NK +L L +I +NLA G +P VD N AHIGGF G+LLGFIL
Sbjct: 1 MLAELITNWTIYSNKVMALLTLLVIIVINLAIGILPHVD---NFAHIGGFLVGLLLGFIL 57
Query: 230 FLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVLG 274
RPQ+G++ ++++ AG K KY YQ + I +LILLV G
Sbjct: 58 LPRPQFGWLEQRHLPAGVRLK---SKYKAYQYVLLIASLILLVAG 99
>gi|380488088|emb|CCF37613.1| rhomboid family protein [Colletotrichum higginsianum]
Length = 572
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 31/232 (13%)
Query: 36 CPAKTAD-----SHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP T++ S+QC L D+ G G T D+ N NQ
Sbjct: 291 CPNSTSNDAANPSNQCGLSDLCG-----------FGGVPEPTYTDI-----NQSPEPNQW 334
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++LHAG+IH+ N+ M + +E G R +Y+ +G G+++ +
Sbjct: 335 FRFITPIFLHAGLIHIGFNLLLQMTIGKEMEIAIGSIRFFLVYVSAGIFGNVMGA--NYA 392
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
S GASGALFG++ L +L+ +W + L + I ++ G +P G+
Sbjct: 393 GVMAASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFILLDIVISFVLGLLP---GL 449
Query: 211 DNLAHIGGFASGVLLGFILF-----LRPQYGYVSEKYIAAGYDAKHRQPKYM 257
DN AHIGGF G+ LG + LR + G Y + + P ++
Sbjct: 450 DNFAHIGGFLMGLALGVCVLHSPNSLRRKMGAEDPSYASMQLNPNQGPPHFL 501
>gi|383786745|ref|YP_005471314.1| hypothetical protein [Fervidobacterium pennivorans DSM 9078]
gi|383109592|gb|AFG35195.1| putative membrane protein [Fervidobacterium pennivorans DSM 9078]
Length = 233
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
L G +V + + +R++++M++H G +HL NM +L ++ E +G R ++L
Sbjct: 45 LFGAQYGPLVDQGEWWRIVTAMFMHGGFLHLAFNMYALYILGSYAEGIYGTYRFLSYFIL 104
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
+G G++ + H + +SVGASGA+FGL+G + + T + K + S L +I
Sbjct: 105 TGIAGNIAT---HFFYHDSLSVGASGAIFGLVGALFAAGFRKDTPFFLKPITGSALLPMI 161
Query: 196 ALNLAFGFIPGVDGVDNLAHI 216
LN+A GFIPG G++N AHI
Sbjct: 162 ILNVALGFIPG-SGINNAAHI 181
>gi|156404290|ref|XP_001640340.1| predicted protein [Nematostella vectensis]
gi|156227474|gb|EDO48277.1| predicted protein [Nematostella vectensis]
Length = 500
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 6/142 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL +++LHAGIIHL+ + + LE+ G+ RI+ +Y+ SG GG L+S +
Sbjct: 291 DQIYRLWMAIFLHAGIIHLLCTLVFNFTILRDLERMAGWIRISIIYIFSGIGGYLISAIL 350
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ V VG SG++FG++ + ELI +W + A +L L V+ L L G +P
Sbjct: 351 IPYQ---VEVGPSGSMFGIIACLFVELIQSWQMVAQPILALLKLCGVVFLLLVVGLLP-- 405
Query: 208 DGVDNLAHIGGFASGVLLGFIL 229
VDN AH+ GF G L FI
Sbjct: 406 -YVDNFAHMAGFCFGFCLAFIF 426
>gi|418633195|ref|ZP_13195612.1| peptidase, S54 family [Staphylococcus epidermidis VCU129]
gi|420190163|ref|ZP_14696107.1| rhomboid family protein [Staphylococcus epidermidis NIHLM037]
gi|420204465|ref|ZP_14710023.1| rhomboid family protein [Staphylococcus epidermidis NIHLM015]
gi|374840014|gb|EHS03521.1| peptidase, S54 family [Staphylococcus epidermidis VCU129]
gi|394259054|gb|EJE03924.1| rhomboid family protein [Staphylococcus epidermidis NIHLM037]
gi|394273475|gb|EJE17906.1| rhomboid family protein [Staphylococcus epidermidis NIHLM015]
Length = 486
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTS 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + GF +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|242242821|ref|ZP_04797266.1| rhomboid family protein [Staphylococcus epidermidis W23144]
gi|420174687|ref|ZP_14681135.1| rhomboid family protein [Staphylococcus epidermidis NIHLM061]
gi|420192300|ref|ZP_14698160.1| rhomboid family protein [Staphylococcus epidermidis NIHLM023]
gi|242233722|gb|EES36034.1| rhomboid family protein [Staphylococcus epidermidis W23144]
gi|394244591|gb|EJD89926.1| rhomboid family protein [Staphylococcus epidermidis NIHLM061]
gi|394261511|gb|EJE06308.1| rhomboid family protein [Staphylococcus epidermidis NIHLM023]
Length = 486
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTS 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + GF +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|119773874|ref|YP_926614.1| hypothetical protein Sama_0736 [Shewanella amazonensis SB2B]
gi|119766374|gb|ABL98944.1| Uncharacterized membrane protein [Shewanella amazonensis SB2B]
Length = 362
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 82 NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS 141
N ++ + + L S M+LH IIHL NM L +V LE G AR LYL+ G +
Sbjct: 189 NQVMHGSHVWTLFSHMFLHGDIIHLAGNMYFLYVVGDNLEDALGRARFLGLYLVCGLAAA 248
Query: 142 LLSCLHHKGKKEIVSVGASGALFGLLGTML-----SELIANWTIYANKCTSLSVLGSVIA 196
+ G +I VGASGA+ GL G L + L + ++ K + L G +A
Sbjct: 249 AAQIISEPG-SDIYMVGASGAIAGLFGMYLLWFRYASLTFMFIVFQKKVSPLVFFGIWLA 307
Query: 197 LNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
LN+ FG +GV AHIGGF +G+++G +++
Sbjct: 308 LNI-FGLYMAGEGVAYWAHIGGFVAGLIIGKLMY 340
>gi|403222163|dbj|BAM40295.1| uncharacterized protein TOT_020000554 [Theileria orientalis strain
Shintoku]
Length = 691
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 11/163 (6%)
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
P+ G LD N I N+ +RL SM +H G++H++ N+ + + + +E ++GF
Sbjct: 376 APNNRVFNLFGSLDANYIRNYNETFRLFWSMVMHKGLVHVLFNLLAQSQILWIIEPDWGF 435
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R A + LSG G+L + + +G+SG LFGL+ +++ I NWT+ A+
Sbjct: 436 CRTASTFFLSGLVGNLAAAVFEPS---FNVLGSSGCLFGLIASLIPYCIENWTLLASPIY 492
Query: 187 --SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
++ ++I+L LAF D V AH GG+ G L GF
Sbjct: 493 IFFFTLCITIISL-LAFN-----DTVSVYAHFGGWVGGFLWGF 529
>gi|448535206|ref|XP_003870930.1| Rbd1 rhomboid-like protein [Candida orthopsilosis Co 90-125]
gi|380355286|emb|CCG24803.1| Rbd1 rhomboid-like protein [Candida orthopsilosis]
Length = 658
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 14/174 (8%)
Query: 69 SISTLRDLGGL---DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
S+S L L GL D NQ YR+ ++LHAG +H++ N+ + + +E+ G
Sbjct: 292 SLSDLCGLSGLPTYDDGEKYAPNQWYRIFIPIFLHAGFLHIIFNLLLQLTMGASIERNIG 351
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI----ANWTIY 181
+ A +Y+ SG G LL + + I S GASGALFG++ T + I N +Y
Sbjct: 352 ILKYAIIYIASGISGFLLGA--NFTPQGIASTGASGALFGIVATNIILFIYTGRKNTNMY 409
Query: 182 ANKCTSLSVLGSV--IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
L + + I ++L G +P G+DN +H+GGFA G+L +L P
Sbjct: 410 GTTHYKLFIFFMICEIVISLVLGLLP---GLDNFSHLGGFAMGILTAVLLLKDP 460
>gi|71002610|ref|XP_755986.1| rhomboid family membrane protein [Aspergillus fumigatus Af293]
gi|66853624|gb|EAL93948.1| rhomboid family membrane protein [Aspergillus fumigatus Af293]
gi|159130040|gb|EDP55154.1| rhomboid family membrane protein [Aspergillus fumigatus A1163]
Length = 524
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
NQ +R + M+LH GIIH+ N+ M ++ +E+ G+ R A +YL SG G +L
Sbjct: 253 EPNQWFRFIIPMFLHTGIIHIGFNLLVQMTMAADMERTVGWWRFAFVYLASGIWGFVLGG 312
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
++ + E S G SG+LFG+L + +L+ W ++ L ++ IA++ G +P
Sbjct: 313 -NYAAQGE-SSCGCSGSLFGILALYILDLLYTWGERSSPWAELVIMVLGIAISFVLGLLP 370
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G+DN +HIGGF G+ G + P
Sbjct: 371 ---GLDNFSHIGGFIMGLASGLCIMRSPN 396
>gi|291438500|ref|ZP_06577890.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291341395|gb|EFE68351.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 296
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + YRL +SM+ H I H+ NM L + LEQ G AR LYL+SG GS L+
Sbjct: 127 VADGEWYRLFTSMFTHEAIWHIAFNMLGLWWLGGPLEQALGRARYLALYLISGLAGSALT 186
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L G ++GASGA+FGL G M + + + +++ +NL F F
Sbjct: 187 YLLASGTT--ATLGASGAIFGLFGAMA-------VLMRRLDYDMRPIIALLVINLIFTFS 237
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
PG + + AHIGG +GV++G+ + P+
Sbjct: 238 PGFN-IAWQAHIGGLVAGVVIGYAMVHAPR 266
>gi|418614697|ref|ZP_13177659.1| peptidase, S54 family [Staphylococcus epidermidis VCU118]
gi|374819233|gb|EHR83361.1| peptidase, S54 family [Staphylococcus epidermidis VCU118]
Length = 486
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTS 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + GF +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|416125288|ref|ZP_11595886.1| rhomboid family protein [Staphylococcus epidermidis FRI909]
gi|420178246|ref|ZP_14684579.1| rhomboid family protein [Staphylococcus epidermidis NIHLM057]
gi|420180055|ref|ZP_14686315.1| rhomboid family protein [Staphylococcus epidermidis NIHLM053]
gi|319400885|gb|EFV89104.1| rhomboid family protein [Staphylococcus epidermidis FRI909]
gi|394246872|gb|EJD92124.1| rhomboid family protein [Staphylococcus epidermidis NIHLM057]
gi|394251487|gb|EJD96572.1| rhomboid family protein [Staphylococcus epidermidis NIHLM053]
Length = 486
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTS 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + GF +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|84994850|ref|XP_952147.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302308|emb|CAI74415.1| hypothetical protein, conserved [Theileria annulata]
Length = 606
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 17/173 (9%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
I+++ GGL+ N I + +RL SM++H G+ HL++N+ S + + + +E ++GF R
Sbjct: 193 QINSIFSFGGLETNYIRNYKEYFRLFWSMFMHKGVAHLLINLLSQIQILWIIEPDWGFIR 252
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI--ANWTI------ 180
LY +SG G S+ S +++G+SGAL+GL G +L +I N TI
Sbjct: 253 TFLLYFISGLGSSITSASLDPC---FITIGSSGALYGLYGGLLPYIIVLGNITISNFLDN 309
Query: 181 -----YANKCTSLSVLGSVIALNLAFGFIPG-VDGVDNLAHIGGFASGVLLGF 227
+ ++ L +I L G + G +DN AH+GG G+L GF
Sbjct: 310 FPHYFHCKNFYTIRQLDYIIKLIGIIGVLMGFTQNIDNYAHLGGCIFGLLWGF 362
>gi|320102859|ref|YP_004178450.1| rhomboid family protein [Isosphaera pallida ATCC 43644]
gi|319750141|gb|ADV61901.1| Rhomboid family protein [Isosphaera pallida ATCC 43644]
Length = 694
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
++ +R L+ M+LH GI+HL +N L +V +E+ FG +YL++G GG+ S
Sbjct: 337 DESWRALTMMFLHVGILHLAMNAWCLWVVGPLIERMFGHGSFLAIYLIAGLGGATASLAW 396
Query: 148 HKGKKEIVSVGASGALFGLLGTM-LSELIANWTIYANKCTSLS-VLGSVIALNLAFGFIP 205
H +S GASGA+FGL+G + + L +I +LS + +ALNLA G
Sbjct: 397 HPIN---LSAGASGAVFGLIGALGAASLHRPQSIPPLVARTLSRAVWGFVALNLAIGL-- 451
Query: 206 GVDGVDNLAHIGGFASGVLLGFILF 230
+ +DN AH+GG G L G ILF
Sbjct: 452 SLPMIDNAAHLGGLVCGFLAGAILF 476
>gi|420199483|ref|ZP_14705161.1| rhomboid family protein [Staphylococcus epidermidis NIHLM031]
gi|394272265|gb|EJE16734.1| rhomboid family protein [Staphylococcus epidermidis NIHLM031]
Length = 486
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L ++GGL +V + YRL+SSM+LH H+++NM SL + +E
Sbjct: 177 YLNRFSDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y++SG G+ +S + +SVGASGA+FGL+G++ +Y +
Sbjct: 236 IGSWRMLIIYIISGLYGNFVSLSFNTS---TISVGASGAIFGLIGSIFV------IMYLS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + ++G +IAL + GF + ++ +AH+GGF SGVL+ I
Sbjct: 287 KNFNKKMIGQLLIALVVLIGFSLFMSNINIMAHLGGFISGVLITLI 332
>gi|326428155|gb|EGD73725.1| hypothetical protein PTSG_05431 [Salpingoeca sp. ATCC 50818]
Length = 745
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 60 WKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYR 119
W+ + L +S L+ G NQ YR +S+++HAGIIH+ + T +
Sbjct: 516 WQSDAQLCSDVSCLKHTCGFSMKDPSEPNQWYRFFTSIFVHAGIIHIFIVATFQWTAAAA 575
Query: 120 LEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWT 179
+E++ GF R+ +Y ++ GG+L+S + + VGA+G +FG+LG + +L +W
Sbjct: 576 VERKCGFLRMLLMYTIACVGGNLVSGIFSPLYPQ---VGAAGGVFGVLGISIVDLFHSWP 632
Query: 180 IYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ + L L IA+ G +P +DN AHIGGF G + +
Sbjct: 633 VIERPMSKLLSLLIEIAVLFFIGTLP---WIDNFAHIGGFVFGAVSAVVF 679
>gi|336266774|ref|XP_003348154.1| hypothetical protein SMAC_03999 [Sordaria macrospora k-hell]
gi|380091090|emb|CCC11296.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 555
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 36 CPAKT-----ADSHQCVLRDILGRYSF-QPWKENYLLGPSISTLRDLGGLDRNLIVRKNQ 89
CP T A + +C L ++ G +PW S +T+ + + NQ
Sbjct: 236 CPNTTTYDIDAPTMKCTLSELCGFGGVPEPWYN------STATMEN--------VPEPNQ 281
Query: 90 KYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHK 149
+R ++ M+LHAG+IH+ NM M + +E+ G R +Y+ +G G ++ +
Sbjct: 282 WWRFITPMFLHAGVIHIGFNMLLQMTIGREMERSIGSIRFFIVYVSAGIFGFVMGG--NF 339
Query: 150 GKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDG 209
+ + GASGALFG++ +L +L+ +W + L + I + G +P G
Sbjct: 340 AANGMQTTGASGALFGVIALLLLDLLYSWRDRKSPWKDLLFIALDIVIAFVLGLLP---G 396
Query: 210 VDNLAHIGGFASGVLLGFILFLRPQ 234
+DN AHIGGF +G+ LG + P
Sbjct: 397 LDNFAHIGGFLAGLALGICVLQSPN 421
>gi|358068283|ref|ZP_09154750.1| hypothetical protein HMPREF9333_01631 [Johnsonella ignava ATCC
51276]
gi|356693542|gb|EHI55216.1| hypothetical protein HMPREF9333_01631 [Johnsonella ignava ATCC
51276]
Length = 206
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + +RLL+SM++H GI H+ NM L ++ LE+ G + YL+ G G +++
Sbjct: 46 VIEGKEYWRLLTSMFMHFGIDHIANNMIVLFMIGDNLERALGHVKYLIFYLICGIGANIV 105
Query: 144 SCLHHK-GKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSV--LGSVIALNLA 200
S VS GASGA+FG++G +L +IAN + L+ + I L+L
Sbjct: 106 SLFFEMLTGNYSVSAGASGAVFGVMGGLLWAVIAN----RGRLEELTSQRMAIFIVLSLY 161
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+GFI GVDN AH+GG G L +++ +
Sbjct: 162 YGFIS--TGVDNAAHVGGAVIGFCLSMLIYKKKN 193
>gi|397642301|gb|EJK75152.1| hypothetical protein THAOC_03139 [Thalassiosira oceanica]
Length = 399
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 45 QCVLRDIL-GRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGI 103
QC++ ++ + P N ++GP TL G + LIV + YRL++ ++LHAG+
Sbjct: 121 QCIILPVMMWQCGVAPLSINPMIGPYPDTLNYWGAKNAVLIVEDGELYRLVTPIFLHAGL 180
Query: 104 IHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGAL 163
IHL+ N+ V R E+E+G +Y+ S G S+ S +SVG+SGA+
Sbjct: 181 IHLLGNVMVQAEVGNRWEKEWGSVIWMIIYMGSAVGSSIASTCFMPDN---ISVGSSGAV 237
Query: 164 FGLLGTMLSELIANWTIYANKCTSLS-----------VLGSVIALNLAFGFIPGVDGVDN 212
GL G SE+ + L+ V+G +I ++L FIP VD
Sbjct: 238 MGLFGAKFSEIFLLCCERSRSIRDLAAEKARKRQVCLVVGGLIIVSL-MSFIPYVDWA-- 294
Query: 213 LAHIGGFASGVLLGFILF 230
AH+GG +G +LG + F
Sbjct: 295 -AHLGGMVAGFVLGLVCF 311
>gi|405950095|gb|EKC18101.1| Rhomboid family member 1 [Crassostrea gigas]
Length = 781
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL- 146
+Q YRL +S++LH G+ HLV+ + LV +E+ G R+A +YL SG G+L S +
Sbjct: 569 DQFYRLWTSLFLHGGLFHLVITIGFQFLVMRDIEKLTGCIRLAIIYLGSGVAGNLASSIF 628
Query: 147 --HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
+H V VG +G FG+L +L E++ + + C ++ +G IA G +
Sbjct: 629 LPYH------VEVGPAGCQFGILACLLVEVLQSIQMLKRPCLAILKIGGFIAFLFILGLL 682
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
P +DN AH+ GF G LL F L +G +
Sbjct: 683 P---WIDNWAHVCGFLFGFLLAFSLLPYVSFGEFDRR 716
>gi|167387754|ref|XP_001738294.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898583|gb|EDR25416.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 334
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
F+ N++LGP+ + LG + I Q +RL++ ++LH GIIHL+ N+T + +
Sbjct: 118 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLICNLTMQLRL 177
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
+E+ + R +Y +SG G+ S + + VGASG+L G+ G + ++I
Sbjct: 178 GMIIERRWNSFRFLVVYFVSGIIGNCFSIICQPTS---IGVGASGSLLGIFGGFVIDIII 234
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
N + N+ L+++G ++ + G+D AHI GF G + F
Sbjct: 235 NKNKFENR-VWLNLIGRLMISIIIIFVFSFAPGIDYSAHIFGFIGGAICAF 284
>gi|449669475|ref|XP_002160443.2| PREDICTED: inactive rhomboid protein 1-like [Hydra magnipapillata]
Length = 733
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+ +Q YRL S++LHAGI+HLV+ + + +E G+ R A +YLLSG GGSL S
Sbjct: 521 QPDQIYRLWLSLFLHAGILHLVIVLIFNFTILQDIELMAGWLRTALIYLLSGIGGSLWSS 580
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ E VG SG+ FG++ + E I +W +Y L ++ + G +P
Sbjct: 581 ILLPYSPE---VGPSGSCFGIIACLFVEYIQSWQLYKTPWIGFFKLCGLVLVLFLIGLLP 637
Query: 206 GVDGVDNLAHIGGFASGVLLGFIL 229
+DN AHI GF G LL I
Sbjct: 638 ---YIDNFAHIFGFVYGFLLSIIF 658
>gi|238922477|ref|YP_002935990.1| hypothetical protein EUBREC_0051 [Eubacterium rectale ATCC 33656]
gi|238874149|gb|ACR73856.1| hypothetical protein EUBREC_0051 [Eubacterium rectale ATCC 33656]
Length = 192
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 85/152 (55%), Gaps = 5/152 (3%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
++ Q +RL +SM++H G++H++ NM L V +E+ G ++ +L+SG GS+LS
Sbjct: 39 IKDGQYWRLFTSMFMHFGLMHILNNMVVLGAVGQIVEKAMGHVKLLITFLVSGMCGSVLS 98
Query: 145 CLHHKGKKE-IVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
+ + VS GASGA+FGL+G ++ +IAN Y +V ++ L + +G
Sbjct: 99 YIVMLYNNDYAVSAGASGAIFGLVGALVWIVIANRGFYEGVSRKQAVF--MVILMIYYG- 155
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
GVDN AH GG G ++ +L+ + +Y
Sbjct: 156 -VSTQGVDNWAHGGGLVGGFVISIVLYRKKRY 186
>gi|163815124|ref|ZP_02206505.1| hypothetical protein COPEUT_01280 [Coprococcus eutactus ATCC 27759]
gi|158449533|gb|EDP26528.1| peptidase, S54 family [Coprococcus eutactus ATCC 27759]
Length = 333
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I K Q YR L+SM+ H GI HL+ NM L+ + R+E G +Y+++G +
Sbjct: 178 ISEKRQYYRFLTSMFTHFGITHLLGNMVILIALGARIENIIGRLNYVIVYIVTGLAAAFA 237
Query: 144 SCLHHK-GKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI--ALNLA 200
S ++ S GASGA+FGLLG ++ +IA + + LS++ +I L L
Sbjct: 238 SYINFFCNDIYDYSAGASGAIFGLLGVLV--VIAFYN--KGRVKDLSLMNMIILFILTLV 293
Query: 201 FGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G + +G+DN+AH GF +G+L G +L L Q
Sbjct: 294 DGLMS--EGIDNVAHAAGFMAGILAGIVLLLVNQ 325
>gi|294827768|ref|NP_711133.2| intramembrane serine protease [Leptospira interrogans serovar Lai
str. 56601]
gi|386073248|ref|YP_005987565.1| intramembrane serine protease [Leptospira interrogans serovar Lai
str. IPAV]
gi|293385613|gb|AAN48151.2| intramembrane serine protease [Leptospira interrogans serovar Lai
str. 56601]
gi|353457037|gb|AER01582.1| intramembrane serine protease [Leptospira interrogans serovar Lai
str. IPAV]
Length = 226
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G +R + Q +RLL ++++HAG HL N L++ + +E G R LY+ SG
Sbjct: 74 GANRRIETLAGQWWRLLINVFVHAGFPHLFFNGFGLIISAIFVELILGRIRFLILYIFSG 133
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GSL S + + +SVGASGA+FGL G +L ++ + +K L ++ + I
Sbjct: 134 LCGSLASIVWY---PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILT 190
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
L +G G+DN AHIGG SG L G ILF Q+G
Sbjct: 191 GLLWGLF---GGIDNAAHIGGLVSGTLSGIILF---QFG 223
>gi|270012402|gb|EFA08850.1| hypothetical protein TcasGA2_TC006551 [Tribolium castaneum]
Length = 1455
Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 60 WKENYLLGPSISTLRDLGG-LDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
+ E L +S L D+ G L +Q YRL +S++LHAG++ L V + +
Sbjct: 1217 FHEEASLCSQVSCLNDVCGMLPFYFAETPDQFYRLWTSLFLHAGVLQLAVTVLIQYFLMR 1276
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
LE+ G RI +Y+ SG G+L S + + + VG +G+ FGLL ++ E++ +W
Sbjct: 1277 DLEKLTGSLRIGIIYIGSGVAGNLASAIFVPYRAD---VGPAGSQFGLLACLIVEVLNSW 1333
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
+ + +L L S+ + G +P VDN AH+ GF G LL + L
Sbjct: 1334 PMLKHPNQALCKLLSITLVLFLIGLLP---WVDNYAHLFGFVFGFLLSYALL 1382
>gi|91089053|ref|XP_970266.1| PREDICTED: similar to rhomboid [Tribolium castaneum]
Length = 1486
Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 60 WKENYLLGPSISTLRDLGG-LDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
+ E L +S L D+ G L +Q YRL +S++LHAG++ L V + +
Sbjct: 1248 FHEEASLCSQVSCLNDVCGMLPFYFAETPDQFYRLWTSLFLHAGVLQLAVTVLIQYFLMR 1307
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
LE+ G RI +Y+ SG G+L S + + + VG +G+ FGLL ++ E++ +W
Sbjct: 1308 DLEKLTGSLRIGIIYIGSGVAGNLASAIFVPYRAD---VGPAGSQFGLLACLIVEVLNSW 1364
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
+ + +L L S+ + G +P VDN AH+ GF G LL + L
Sbjct: 1365 PMLKHPNQALCKLLSITLVLFLIGLLP---WVDNYAHLFGFVFGFLLSYALL 1413
>gi|357053297|ref|ZP_09114395.1| hypothetical protein HMPREF9467_01367 [Clostridium clostridioforme
2_1_49FAA]
gi|355385874|gb|EHG32920.1| hypothetical protein HMPREF9467_01367 [Clostridium clostridioforme
2_1_49FAA]
Length = 206
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 9/160 (5%)
Query: 83 LIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSL 142
++ + YRL ++M+LH G+ HL NM L+++ ++E+ G + YL SG +
Sbjct: 49 FVILGGEYYRLFTAMFLHFGVSHLANNMLVLLVLGEKMEKALGHIKYLIFYLASGVAANG 108
Query: 143 LS-CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS--VLGSVIALNL 199
+S + + VS GASGA+FG++G ++ + I+ + L+ LG ++ L L
Sbjct: 109 ISLAVQVRTGAASVSAGASGAIFGVVGGLVYVI----AIHHGQLDGLTNRQLGFMVLLTL 164
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
GF GVDN+AHIGG SG +LG +L+ R +S
Sbjct: 165 YHGFTS--TGVDNVAHIGGLISGFILGILLYRRKHAARIS 202
>gi|29568120|gb|AAO61491.1| C16orf8-like protein [Takifugu rubripes]
Length = 855
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q RL S++LHAGI+H +V++ M V +E+ G+ R++ +Y+LSG G+L S +
Sbjct: 651 DQFSRLWLSLFLHAGILHCLVSVFFQMTVLRDIEKLAGWLRVSIIYMLSGITGNLASSIF 710
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G FG+L + EL NW + L ++ +FG +P
Sbjct: 711 LPYRAE---VGPAGNQFGILACLKEELFQNWQNLERPWRAFGKLLAISTFLFSFGLLP-- 765
Query: 208 DGVDNLAHIGGFASGVLLGFILF 230
+DN HI GF SG L F
Sbjct: 766 -WIDNFGHICGFVSGFFLSFTFL 787
>gi|288555804|ref|YP_003427739.1| rhomboid protein membrane-associated serine peptidase [Bacillus
pseudofirmus OF4]
gi|288546964|gb|ADC50847.1| rhomboid protein, putative membrane-associated serine peptidase
[Bacillus pseudofirmus OF4]
Length = 512
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 24/199 (12%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + + +R SSM+LH G IHL +N +L + +E+ +G +R +Y ++G
Sbjct: 216 GAKYNPAILEGEWWRFFSSMFLHIGFIHLFMNSLALFYLGGAVERMYGTSRFVLIYFIAG 275
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GS+ S + E V+ GASGA+FGL G +L A ++ + ++VL ++ +
Sbjct: 276 LIGSISSFAFN----EQVAAGASGAIFGLFGALLYFGTAQPKLFF-RTMGMNVL-VILGI 329
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYM 257
NL FGF+ + +DN AHIGG G L ++ L + G +P+ +
Sbjct: 330 NLVFGFV--MPMIDNGAHIGGLVGGFLAAALVQLPKEKG----------------RPRQI 371
Query: 258 HYQQLCWIIALILLVLGYI 276
Y I+AL L LG+I
Sbjct: 372 FYLLGTIILALSLFWLGHI 390
>gi|268319881|ref|YP_003293537.1| hypothetical protein FI9785_1410 [Lactobacillus johnsonii FI9785]
gi|262398256|emb|CAX67270.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
Length = 228
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+ L LG ++ L+ +Q +RL ++ +LH G +H+ N + + +E G
Sbjct: 36 TNINILVRLGAMNNQLVTVGHQWWRLFTAQFLHIGWLHIASNAVMIYYMGQFMEPLLGHW 95
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YLLSG GG+LLS + +VS GAS ALFGL G +++ +AN I A
Sbjct: 96 RFLTVYLLSGIGGNLLS--YAYVSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLG 153
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
L I +NLA +D L H+GG SG LLG I
Sbjct: 154 RQALALAI-INLALDLFA--SHIDILGHLGGLISGFLLGII 191
>gi|310792586|gb|EFQ28113.1| rhomboid family protein [Glomerella graminicola M1.001]
Length = 561
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 80 DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFG 139
D N NQ +R ++ ++LHAG+IH+ N+ M + +E G R +YL +G
Sbjct: 313 DINQSPEPNQWFRFITPIFLHAGLIHIGFNLLLQMTIGKEMEVAIGSIRFFLVYLSAGIF 372
Query: 140 GSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNL 199
G+++ + S GASGALFG++ L +L+ +W + L + + ++
Sbjct: 373 GNVMGA--NYAGVMAASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFIMLDVVISF 430
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVLLGFILF-----LRPQYGYVSEKYIAAGYDAKHRQP 254
G +P G+DN AHIGGF G+ LG + LR + G Y + + P
Sbjct: 431 VLGLLP---GLDNFAHIGGFLMGLALGVCVLHSPNSLRRRMGAEDPSYASMQLNPNQGPP 487
Query: 255 KYM 257
++
Sbjct: 488 PFL 490
>gi|424826465|ref|ZP_18251350.1| S54 family peptidase [Clostridium sporogenes PA 3679]
gi|365980910|gb|EHN16927.1| S54 family peptidase [Clostridium sporogenes PA 3679]
Length = 343
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 18/162 (11%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + YRL+++M+LH G+IHL +NM +L + +E FG + +Y +SG
Sbjct: 190 GAKVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNSIGPLVEIYFGKVKYLIIYFISG 249
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS----LSVLGS 193
+LS VS+GASGA+FG LG L +IA Y N+ L+ + S
Sbjct: 250 ----ILSSYFSYLFSSSVSIGASGAIFGTLGATL--IIA----YKNRKKGGKEFLNNIIS 299
Query: 194 VIALNLAFGF-IPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
VI +NL GF IP VDN HIGG GV++ +L R +
Sbjct: 300 VIVINLILGFSIP---NVDNFGHIGGLIGGVIVTLLLMNRTK 338
>gi|225375145|ref|ZP_03752366.1| hypothetical protein ROSEINA2194_00769 [Roseburia inulinivorans DSM
16841]
gi|225213019|gb|EEG95373.1| hypothetical protein ROSEINA2194_00769 [Roseburia inulinivorans DSM
16841]
Length = 357
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 9/157 (5%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G + + +Q +RLL++M+LH G+ HL+ NM V RLE+ G ++A +Y +
Sbjct: 200 GAMYPEFLTINHQWWRLLTAMFLHFGVAHLMNNMVIFCCVGSRLEKYIGHWKMAVVYFAA 259
Query: 137 GFGGSLLS-CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG--S 193
G GG LLS + VS GASGA+FG++G +L +I + K ++ G
Sbjct: 260 GIGGGLLSYIMMLLSGNYAVSGGASGAVFGVIGGLLWVVI----YHRGKLEGMTTKGILI 315
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
+I L+L FGF GVDN H+GG G L IL+
Sbjct: 316 MIVLSLYFGFTS--IGVDNWCHVGGMLCGFLATLILY 350
>gi|402221037|gb|EJU01107.1| rhomboid-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 338
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 7/161 (4%)
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
+ST+ GG + + NQ +R + ++LH GIIH+++NM + + +E++ G
Sbjct: 112 LSTVCGFGGFPADGV--PNQWFRFILPIFLHVGIIHILLNMLAQATLCTLVERQVGSTAF 169
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLS 189
+Y +G G++L + I S+GASGA+FG + +L+ +W + SL
Sbjct: 170 IIIYFAAGIFGNVLG--GNFALLGITSMGASGAIFGCVAAQWVDLLTHWNLEDRPGRSLI 227
Query: 190 VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
L + G+IP GVDN AH+GGF G+L +LF
Sbjct: 228 FLIIEFIIGFGLGYIP---GVDNFAHLGGFLMGLLTCIVLF 265
>gi|187776993|ref|ZP_02993466.1| hypothetical protein CLOSPO_00538 [Clostridium sporogenes ATCC
15579]
gi|187773921|gb|EDU37723.1| peptidase, S54 family [Clostridium sporogenes ATCC 15579]
Length = 344
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + YRL+++M+LH G+IHL +NM +L + +E FG + +Y +SG
Sbjct: 190 GAKVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNSIGPLVEIYFGKVKYLIIYFISG 249
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS----LSVLGS 193
+LS VS+GASGA+FG LG +IA Y N+ L+ + S
Sbjct: 250 ----ILSSYFSYLFSSSVSIGASGAIFGTLGATF--IIA----YKNRKRGGKEFLNNIIS 299
Query: 194 VIALNLAFGF-IPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
VI +NL GF IP VDN HIGG GV++ +L R Q
Sbjct: 300 VIVINLILGFSIP---NVDNFGHIGGLIGGVIVTLLLMNRAQ 338
>gi|171692185|ref|XP_001911017.1| hypothetical protein [Podospora anserina S mat+]
gi|170946041|emb|CAP72842.1| unnamed protein product [Podospora anserina S mat+]
Length = 523
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 59 PWKENYLLGPSISTLRDLGGLDR-NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVS 117
PW ++S L GG+ + NQ +R + ++LHAG+IH+ NM + +
Sbjct: 222 PWSTTNENTCTLSELCGFGGVQQPGQPPEPNQWFRFIVPIFLHAGLIHIGFNMLLQLTLG 281
Query: 118 YRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIAN 177
+E+ G R +Y+ +G G ++ + I S GASG+LFG++ +L+ +
Sbjct: 282 RDMEKHIGSIRFFIVYMSAGIFGFVMGG--NFAATGIASTGASGSLFGIIALTFLDLLYS 339
Query: 178 WTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
W N L L I ++ G +P G+DN +HIGGF G+ LG + P
Sbjct: 340 WKDRVNPTKDLMYLFIDIIISFVLGLLP---GLDNFSHIGGFLMGLALGICILHSPN 393
>gi|317128371|ref|YP_004094653.1| Rhomboid protease [Bacillus cellulosilyticus DSM 2522]
gi|315473319|gb|ADU29922.1| Rhomboid protease [Bacillus cellulosilyticus DSM 2522]
Length = 524
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 67 GPSISTLRDLG-GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
G S+ST + G N ++ + + +R S+M+LH G HL++N +L + +E+ +G
Sbjct: 208 GSSMSTETLISFGAKFNPLILQGEWWRFFSAMFLHIGFFHLMMNSLALFYLGSAVERIYG 267
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
R +YL++G GS+ S E VS GASGA+FG G +L I + ++ +
Sbjct: 268 TGRFLIIYLIAGLVGSIASF----ALNEQVSAGASGAIFGCFGALLYFGIKHKRLFF-RT 322
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
++V+ ++++NLAFGFI V +DN AHIGG G I+ L P+ V + IA
Sbjct: 323 MGMNVI-VILSINLAFGFI--VPMIDNGAHIGGLIGGFAASAIVSL-PRNKNVKSQIIA 377
>gi|392533728|ref|ZP_10280865.1| rhomboid-like protein [Pseudoalteromonas arctica A 37-1-2]
Length = 361
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 64 YLLGPS-ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
Y L PS S + D + + + N+ + +L+ ++LH I+HLV NM L +V LE
Sbjct: 169 YFLNPSSFSYVIDNFAMTPADLSKGNELWTVLTCVFLHGSIMHLVGNMYFLYIVGDNLED 228
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML-----SELIAN 177
G R YL G S S + I VGASGA+ GL G L + L
Sbjct: 229 VLGHKRFLLWYLACGLLASFASYIVSP-MSNIPGVGASGAIAGLFGMYLIWFRHASLTFM 287
Query: 178 WTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ IY K +++ + N+ FG + G DG+D AHIGGF +G+++G+IL
Sbjct: 288 FVIYQKKLSAVWFFAIWLGFNI-FGAVTGPDGIDYGAHIGGFIAGLIIGYIL 338
>gi|386714819|ref|YP_006181142.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
gi|384074375|emb|CCG45868.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
Length = 510
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 93/156 (59%), Gaps = 9/156 (5%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S+STL + G N + + + +R+ SSM+LH G++HL++NM +L + +E+ +G R
Sbjct: 207 SVSTLIEFGA-KYNPAIMEGEWWRIGSSMFLHIGLLHLLMNMLALYYIGIAVERIYGTWR 265
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+ +YLL+G G + S + + V+ GASGA+FGL G +L + + ++ K
Sbjct: 266 FSVIYLLAGIFGGVASFMLNPH----VAAGASGAIFGLFGALLYFGVRHRQLFF-KTMGW 320
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
+++ VIALN+AFG + V VDN AH+GG G +
Sbjct: 321 NLI-FVIALNIAFGIM--VPQVDNGAHMGGLIGGFI 353
>gi|418327645|ref|ZP_12938790.1| peptidase, S54 family [Staphylococcus epidermidis 14.1.R1.SE]
gi|365232769|gb|EHM73752.1| peptidase, S54 family [Staphylococcus epidermidis 14.1.R1.SE]
Length = 234
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 11/157 (7%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L ++GGL +V + YRL+SSM+LH H+++NM SL + +E G R+ +
Sbjct: 61 LLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLII 119
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y++SG G+ +S +SVGASGA+FGL+G++ +Y +K + ++G
Sbjct: 120 YIISGLYGNFVSL---SFNTSTISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIG 170
Query: 193 S-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
+IAL + GF + ++ +AH+GGF SGVL+ I
Sbjct: 171 QLLIALVVLIGFSLFMSNINIMAHLGGFISGVLITLI 207
>gi|238502587|ref|XP_002382527.1| rhomboid family membrane protein [Aspergillus flavus NRRL3357]
gi|220691337|gb|EED47685.1| rhomboid family membrane protein [Aspergillus flavus NRRL3357]
gi|391871078|gb|EIT80244.1| Rhomboid family protein [Aspergillus oryzae 3.042]
Length = 518
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T ++ +C L ++ G N LG G LD NQ YR +
Sbjct: 208 CPNSTTNALECTLSELCGFGGV----PNPHLG---------GSLDDQ--PEPNQWYRFIV 252
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
++LH G IH+ N+ M + +E+ G+ R +Y SG G +L + +
Sbjct: 253 PIFLHGGFIHIGFNLLCQMTMGVDMERMVGWWRYGLVYFASGIWGFVLGGNYAAPFQP-- 310
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S G SGALFG+L + +L W + L ++ + ++ G +P G+DN +H
Sbjct: 311 SSGCSGALFGILALFILDLFYTWKERPSPFVELIIMVLGVGISFVLGLLP---GLDNFSH 367
Query: 216 IGGFASGVLLGFILF-----LRPQYGYVSEKYIA 244
IGGF G+ LG + LR + G Y+A
Sbjct: 368 IGGFIMGLALGLCIMRSPNALRERIGLARNPYVA 401
>gi|451821413|ref|YP_007457614.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451787392|gb|AGF58360.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 332
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 11/141 (7%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ K Q +RLL+ +LH+G+IH+ NM SL ++ ++EQ +G + +Y++S
Sbjct: 177 GAKYNALIDKGQVWRLLTCAFLHSGLIHIACNMYSLYIIGPQIEQIYGTLKYLIIYIVSS 236
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS--LSVLGSVI 195
S LS + +SVGASGA+FGL+G +L A I NK +S L VI
Sbjct: 237 ITASALSYFM---SPDSISVGASGAIFGLMGALL----AFAFIERNKIQKKYMSSLMQVI 289
Query: 196 ALNLAFGFIPGVDGVDNLAHI 216
+NL G + +DN AHI
Sbjct: 290 IINLFIGL--SISNIDNFAHI 308
>gi|169775935|ref|XP_001822434.1| DHHC zinc finger membrane protein [Aspergillus oryzae RIB40]
gi|83771169|dbj|BAE61301.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 518
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T ++ +C L ++ G N LG G LD NQ YR +
Sbjct: 208 CPNSTTNALECTLSELCGFGGV----PNPHLG---------GSLDDQ--PEPNQWYRFIV 252
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
++LH G IH+ N+ M + +E+ G+ R +Y SG G +L + +
Sbjct: 253 PIFLHGGFIHIGFNLLCQMTMGVDMERMVGWWRYGLVYFASGIWGFVLGGNYAAPFQP-- 310
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S G SGALFG+L + +L W + L ++ + ++ G +P G+DN +H
Sbjct: 311 SSGCSGALFGILALFILDLFYTWKERPSPFVELIIMVLGVGISFVLGLLP---GLDNFSH 367
Query: 216 IGGFASGVLLGFILF-----LRPQYGYVSEKYIA 244
IGGF G+ LG + LR + G Y+A
Sbjct: 368 IGGFIMGLALGLCIMRSPNALRERIGLARNPYVA 401
>gi|400602302|gb|EJP69904.1| rhomboid family protein [Beauveria bassiana ARSEF 2860]
Length = 517
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 20/199 (10%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T ++ C L + G G + D G D+N +Q YR +
Sbjct: 243 CPNATTNTEICPLSTLCG------------FGGVPDPIFD-GNADQN--PAPDQWYRFII 287
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
+++HAGIIH+ N+ + V+ +EQ G R +Y+ +G G ++ + I
Sbjct: 288 PIFMHAGIIHIGFNLLLQLTVAKEMEQAIGSIRFFLVYMSAGIFGFVMG--GNFAAPGIA 345
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG+LFG++ L +L+ +W+ + L + + + G +P G+DN +H
Sbjct: 346 STGASGSLFGIIALTLLDLLYSWSERRSPVKDLMFIIVDMVIAFVLGLLP---GLDNFSH 402
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF G+ LG + P
Sbjct: 403 IGGFLMGLALGICVLHSPN 421
>gi|436838188|ref|YP_007323404.1| Rhomboid protease gluP [Fibrella aestuarina BUZ 2]
gi|384069601|emb|CCH02811.1| Rhomboid protease gluP [Fibrella aestuarina BUZ 2]
Length = 251
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 6/127 (4%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH 148
Q +RLL++ +LH G+IH+VVNM SL ++ ++E G +R A Y+++G GSL+S H
Sbjct: 74 QPWRLLTACFLHIGLIHIVVNMMSLRVLGSQIEPLLGTSRFAVGYVVTGLTGSLVSLWWH 133
Query: 149 KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVD 208
+VS GASGA+FG+ G ++ L+ N A + L SV+ +NL G G+
Sbjct: 134 ---DMVVSAGASGAIFGIEGMLVGLLLTNLFDAAARKALLKNSLSVVGINLLIG--AGI- 187
Query: 209 GVDNLAH 215
G DN AH
Sbjct: 188 GADNAAH 194
>gi|359442292|ref|ZP_09232162.1| hypothetical protein P20429_2538 [Pseudoalteromonas sp. BSi20429]
gi|358035903|dbj|GAA68411.1| hypothetical protein P20429_2538 [Pseudoalteromonas sp. BSi20429]
Length = 361
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 64 YLLGPS-ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
Y L PS S + D + + + N+ + +L+ ++LH I+HLV NM L +V LE
Sbjct: 169 YFLNPSSFSYVIDNFAMTPADLSKGNELWTVLTCVFLHGSIMHLVGNMYFLYIVGDNLED 228
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML-----SELIAN 177
G R YL G S S + I VGASGA+ GL G L + L
Sbjct: 229 VLGHKRFLLWYLACGLLASFASYIVSP-MSTIPGVGASGAIAGLFGMYLMWFRHASLTFM 287
Query: 178 WTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ IY K +++ + N+ FG + G DG+D AHIGGF +G+++G+IL
Sbjct: 288 FIIYQKKLSAVWFFAIWLGFNI-FGAVTGPDGIDYGAHIGGFIAGLIIGYIL 338
>gi|300812773|ref|ZP_07093172.1| peptidase, S54 family [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313124161|ref|YP_004034420.1| membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|422844075|ref|ZP_16890785.1| S54 family peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|300496246|gb|EFK31369.1| peptidase, S54 family [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312280724|gb|ADQ61443.1| Membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|325685831|gb|EGD27902.1| S54 family peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 223
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 92/183 (50%), Gaps = 18/183 (9%)
Query: 62 ENYLLGP-SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E ++ G S S L +G + +V + Q +RL ++ +LH GI+H+ N + +
Sbjct: 24 ETFMGGSESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYA 83
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E FG R +YLLSG GGSLL+ G + +S GAS ALFGL G M T
Sbjct: 84 EPVFGHWRFLLIYLLSGVGGSLLTLAF--GNDQAISAGASTALFGLFGAM------TCTG 135
Query: 181 YANK-CTSLSVLG----SVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ +K T LS LG ++ +NL F+P VD L H+GG +G LL IL
Sbjct: 136 FKDKDNTLLSFLGRQALALAVINLVLDVFMP---DVDILGHVGGLITGALLAVILGDATY 192
Query: 235 YGY 237
GY
Sbjct: 193 KGY 195
>gi|238854484|ref|ZP_04644823.1| rhomboid protease GluP [Lactobacillus jensenii 269-3]
gi|313471846|ref|ZP_07812338.1| rhomboid family protein [Lactobacillus jensenii 1153]
gi|238832911|gb|EEQ25209.1| rhomboid protease GluP [Lactobacillus jensenii 269-3]
gi|313449012|gb|EEQ68240.2| rhomboid family protein [Lactobacillus jensenii 1153]
Length = 229
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 95/194 (48%), Gaps = 27/194 (13%)
Query: 70 ISTLRDLGGLDRNLIVRK------------NQKYRLLSSMWLHAGIIHLVVNMTSLMLVS 117
I TLR GG D + ++ K Q +RL ++ +LH G++HLVVN +L +
Sbjct: 29 IETLR--GGSDESAVLFKLGAQFNPAIIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMG 86
Query: 118 YRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIAN 177
LE G R +YLL+G GG+L++ G VS GAS ALFGL G M++ IAN
Sbjct: 87 QYLEPMLGHVRFLIIYLLAGVGGNLMTL--ALGSDNAVSAGASTALFGLFGAMIALGIAN 144
Query: 178 WTIYANKCTSLSVLGS----VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
T ++ LG + +NL F + +D H+GG +G LL IL +
Sbjct: 145 RT-----HEGMAYLGRQSFVLAVINLLFDI--NIPQIDTWGHVGGLLAGFLLTVILGDQN 197
Query: 234 QYGYVSEKYIAAGY 247
GY I AG+
Sbjct: 198 LRGYKLPIKILAGF 211
>gi|402074200|gb|EJT69729.1| rhomboid family membrane protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 587
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+ NQ +R ++ +++HAG+IH+ N+ + + +E G R +Y+ +G G ++
Sbjct: 317 VPAPNQWFRFITPIFMHAGLIHIGFNLLLQLTIGRDMEMSIGTLRFFLVYMSAGIFGFVM 376
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
+ I S GASG+LFG++ L +L+ +W N L + +A++ G
Sbjct: 377 G--GNFAATGIASTGASGSLFGIIALTLLDLLYSWKDRKNPTKDLLFIFLDVAISFVLGL 434
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+P G+DN +HIGGF G+ LG L P
Sbjct: 435 LP---GLDNFSHIGGFLMGLALGVCLLHSPN 462
>gi|385816085|ref|YP_005852476.1| hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325126122|gb|ADY85452.1| Putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 223
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 62 ENYLLGP-SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E ++ G S S L +G + +V + Q +RL ++ +LH GI+H+ N + +
Sbjct: 24 ETFMGGSESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYA 83
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E FG R +YLLSG GGSLL+ G + +S GAS ALFGL G M +
Sbjct: 84 EPVFGHWRFLLIYLLSGVGGSLLTLAF--GNDQAISAGASTALFGLFGAMTCAGFKD--- 138
Query: 181 YANKCTSLSVLG----SVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
T LS LG ++ +NL F+P VD L H+GG +G LL IL
Sbjct: 139 --KDNTLLSFLGRQAWALAVINLVLDVFMP---DVDILGHVGGLITGALLAVILGDATYK 193
Query: 236 GY 237
GY
Sbjct: 194 GY 195
>gi|433462194|ref|ZP_20419783.1| S54 family peptidase [Halobacillus sp. BAB-2008]
gi|432189083|gb|ELK46216.1| S54 family peptidase [Halobacillus sp. BAB-2008]
Length = 510
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 19/171 (11%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
++ TL + G N + + + +RL++SM+LH G+IHL++NM +L + +E+ +G R
Sbjct: 206 NVETLIEYGA-KFNPAIMEGEWWRLVTSMFLHIGLIHLMMNMLALYYIGTAVERIYGSWR 264
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLL+G GS+ S + + VS GASGA+FGL G +L W N+
Sbjct: 265 YIIIYLLAGVFGSVASFMLNPQ----VSAGASGAIFGLFGALL--YFGVW----NRRLFF 314
Query: 189 SVLG----SVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+G +I LN+AFG F+P +DN AH+GG G + I L Q
Sbjct: 315 QTMGWNLLFIIGLNIAFGLFVP---QIDNGAHMGGLIGGFIAAAISQLPKQ 362
>gi|453087192|gb|EMF15233.1| rhomboid-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 503
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 36 CPAKTA---DSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYR 92
CP TA DS C L D+ S + + N G LD +Q +R
Sbjct: 208 CPNATATSGDSTTCQLSDLCNFNSDRNPRVN-------------GSLDDT--PAPDQWWR 252
Query: 93 LLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKK 152
+ +++HAGIIH+ N+ + + +E G R A LY SG G +L +
Sbjct: 253 FIVPIFIHAGIIHIGFNLLLQVTLGRDVELLIGSVRFAILYFASGIFGFILGG--NFAAT 310
Query: 153 EIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDN 212
I S GASG+LFG+L L +L+ W + L + I + G +P G+DN
Sbjct: 311 GIASCGASGSLFGILAITLLDLLYTWKDRRSPIKDLMFIIIDILIAFVLGLLP---GLDN 367
Query: 213 LAHIGGFASGVLLGFILFLRP 233
+HIGGF G++LG L P
Sbjct: 368 FSHIGGFLMGLVLGVCLLRSP 388
>gi|157273306|gb|ABV27205.1| integral membrane protein Rhomboid family protein [Candidatus
Chloracidobacterium thermophilum]
Length = 386
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 71 STLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIA 130
L G +R LI + + +RL+ M+LH G+IHLV NM +L +V +LE +G AR
Sbjct: 59 EVLTAFGACNRKLIA-QGELWRLVVPMFLHIGVIHLVANMYALWVVGPQLESLYGSARFT 117
Query: 131 PLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN--KCTSL 188
LY+LSG GG + S + E + GASGALFG+ G +L + + + T
Sbjct: 118 ILYVLSGIGGFVAS--YFFAHPESIGAGASGALFGMFGALLVFVYKYRSEIPPLVRATMR 175
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYD 248
+ +ALNL F + + H+GG +G+ L + P
Sbjct: 176 RGVWLTLALNLIITF--SIPFISRSGHVGGLLTGICLALFIPYSP--------------P 219
Query: 249 AKHRQPKYMHYQQLCWIIALILLVLGYI 276
++H+ P Q+ ++A+++L G++
Sbjct: 220 SEHKTPWVWRVWQIV-LLAIVVLSFGFM 246
>gi|418035808|ref|ZP_12674250.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354689374|gb|EHE89372.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 215
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 62 ENYLLGP-SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E ++ G S S L ++G + +V + Q +RL ++ +LH GI+H+ N + +
Sbjct: 16 ETFMGGSESTSVLLEMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYA 75
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E FG R +YLLSG GGSLL+ G + +S GAS ALFGL G M +
Sbjct: 76 EPVFGHWRFLLIYLLSGVGGSLLTLAF--GNDQAISAGASTALFGLFGAMTCAGFKD--- 130
Query: 181 YANKCTSLSVLG----SVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
T LS LG ++ +NL F+P VD L H+GG +G LL IL
Sbjct: 131 --KDNTLLSFLGRQALALAVINLVLDVFMP---DVDILGHLGGLITGALLAVILGDATYK 185
Query: 236 GY 237
GY
Sbjct: 186 GY 187
>gi|255533925|ref|YP_003094297.1| rhomboid family protein [Pedobacter heparinus DSM 2366]
gi|255346909|gb|ACU06235.1| Rhomboid family protein [Pedobacter heparinus DSM 2366]
Length = 513
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 9/155 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G++ + Q +RLLSS + H ++HL NM +L+ + E + G+A+ +Y+LSG
Sbjct: 207 GINSRDLTLSGQWWRLLSSQFYHFSLLHLFFNMYALIYIGLMTENKLGWAKTLIVYILSG 266
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
G+LLS HK GASGA+ G+ G L+ L++N A + T+ L +
Sbjct: 267 TCGALLSVYGHKIG---FMGGASGAIMGMFGAFLALLLSN----AFEKTAARALLISTVI 319
Query: 198 NLAFGFIPGV--DGVDNLAHIGGFASGVLLGFILF 230
+A+ + G+ + DN AH+GG SG L+G++L+
Sbjct: 320 VVAYMLLNGLLSETADNSAHLGGLVSGFLIGYLLY 354
>gi|167760294|ref|ZP_02432421.1| hypothetical protein CLOSCI_02667 [Clostridium scindens ATCC 35704]
gi|336421421|ref|ZP_08601579.1| hypothetical protein HMPREF0993_00956 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167662177|gb|EDS06307.1| peptidase, S54 family [Clostridium scindens ATCC 35704]
gi|336000700|gb|EGN30847.1| hypothetical protein HMPREF0993_00956 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 204
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 15/182 (8%)
Query: 56 SFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLML 115
SFQ E+ L + + G + I + + YR+ +SM+LH G HL NM +L+L
Sbjct: 26 SFQGATEDGLF------MLEHGAMYVPFITEQGEYYRMFTSMFLHFGFEHLFNNMITLVL 79
Query: 116 VSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH-KGKKEIVSVGASGALFGLLGTMLSEL 174
+ + LE E G R +Y+LSG GG++LS + ++ GASGA+FG++G +L
Sbjct: 80 IGWNLEVEIGSIRFLVIYILSGLGGNILSSWWDIRLADYAIAAGASGAIFGIIGALLYVA 139
Query: 175 IANWTIYANKCTSLSVLGSV--IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
I N + +S G V I + L +G+ G GVDN+AHIGG +G LL +L+ +
Sbjct: 140 IRN----RGRIGDISGRGIVFMIFITLYYGYSSG--GVDNMAHIGGLTTGFLLCILLYWK 193
Query: 233 PQ 234
+
Sbjct: 194 RK 195
>gi|302697719|ref|XP_003038538.1| hypothetical protein SCHCODRAFT_47563 [Schizophyllum commune H4-8]
gi|300112235|gb|EFJ03636.1| hypothetical protein SCHCODRAFT_47563 [Schizophyllum commune H4-8]
Length = 368
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
T+ +L G NQ +R ++ ++LHAGI+HL++NM + + VS ++E+E G
Sbjct: 122 TIEELCGFGGFHDKEPNQWFRFITPIFLHAGIVHLILNMFAQVTVSAQIEREMGSGGFFL 181
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
Y +G G++L + I SVGASGA+FG + +L A+W L +
Sbjct: 182 TYFAAGIFGNILG--GNFALVGIPSVGASGAIFGTIAVTWVDLFAHWKYQYRPVRKLIFM 239
Query: 192 GSVIALNLAFGFIPGVDGVDNLAH 215
+A+ +A GFIP VDN AH
Sbjct: 240 IIELAIGIAIGFIP---YVDNFAH 260
>gi|300823026|ref|ZP_07103160.1| peptidase, S54 family protein [Escherichia coli MS 119-7]
gi|417224822|ref|ZP_12028113.1| peptidase, S54 family [Escherichia coli 96.154]
gi|417268148|ref|ZP_12055509.1| peptidase, S54 family [Escherichia coli 3.3884]
gi|423708594|ref|ZP_17682972.1| 40-residue YVTN family beta-propeller [Escherichia coli B799]
gi|432375777|ref|ZP_19618789.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE12]
gi|432833688|ref|ZP_20067234.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE136]
gi|300524375|gb|EFK45444.1| peptidase, S54 family protein [Escherichia coli MS 119-7]
gi|385707931|gb|EIG44956.1| 40-residue YVTN family beta-propeller [Escherichia coli B799]
gi|386199870|gb|EIH98861.1| peptidase, S54 family [Escherichia coli 96.154]
gi|386230506|gb|EII57861.1| peptidase, S54 family [Escherichia coli 3.3884]
gi|430901150|gb|ELC23133.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE12]
gi|431388187|gb|ELG71925.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE136]
Length = 625
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 86/143 (60%), Gaps = 7/143 (4%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG-FGGSLLSCLH 147
+ +RL SS++LH+ HL++NM +L++V E+ G R+ ++L SG FGG + +C
Sbjct: 60 ESWRLFSSVFLHSSFSHLLMNMFALLVVGAVAERILGKWRLLIIWLFSGVFGGLISACYA 119
Query: 148 HKGKKEIV-SVGASGALFGLLGTMLSELIAN--WTIYANKCTSLSVLGSVIALNLAFGFI 204
+ +IV SVGASGA+ G+ G L+ +A+ T + N+ S+LG ++AL L +G
Sbjct: 120 LRDSDQIVISVGASGAIMGIAGAALATQLASGAGTYHKNQRRVFSLLG-MVALTLLYGAR 178
Query: 205 PGVDGVDNLAHIGGFASGVLLGF 227
G+DN HIGG +G +G+
Sbjct: 179 QA--GIDNACHIGGLIAGGAMGW 199
>gi|403237491|ref|ZP_10916077.1| rhomboid protein membrane-associated serine peptidase [Bacillus sp.
10403023]
Length = 515
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + +R + M LH G IHL++N +L + +E+ +G +R +Y+ +G
Sbjct: 214 GAKENFRILNGEWWRFFTPMILHIGFIHLLMNTFALYYLGTEVERLYGKSRFLMIYVFAG 273
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
F GSL S + + +S GASGA+FG G +L A +++ + +V+G +I +
Sbjct: 274 FLGSLASFVFNAN----ISAGASGAIFGCFGALLFFGTAYPSLFF-RTMGPNVIG-IIII 327
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
NL GF+ + G+DN HIGG G L I+ L + Y
Sbjct: 328 NLVLGFM--IPGIDNSGHIGGLVGGFLAASIVHLPKRKDYAK 367
>gi|340904956|gb|EGS17324.1| hypothetical protein CTHT_0066450 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 496
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
NQ +R + +++HAG+IH+ N+ + + +E+ G R +Y+ SG G ++
Sbjct: 264 EPNQWFRFIIPIFMHAGVIHIGFNLLLQLTLGRDMERSIGSIRFFLVYMCSGIFGFVMGG 323
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ I S GASG+LFG++ L +L +W N LS + + ++ G +P
Sbjct: 324 --NFAATGIASTGASGSLFGIIALTLLDLFYSWKDRMNPVKDLSYILLNVIISFVLGLLP 381
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRPQY------GYV--SEKYIAAGYDAKHRQPKY 256
G+DN +HIGGF G+ LG + P G V + ++++GY ++ P +
Sbjct: 382 ---GLDNFSHIGGFLMGLALGICVLHSPNSLRRRIGGDVPYASSHVSSGYASQGTPPSF 437
>gi|389576264|ref|ZP_10166292.1| putative membrane protein [Eubacterium cellulosolvens 6]
gi|389311749|gb|EIM56682.1| putative membrane protein [Eubacterium cellulosolvens 6]
Length = 215
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+ T G + R L++ + + +RL +SM++H G+ HLV N SL+L+ LEQ G R
Sbjct: 42 DVDTAIRFGAMYRPLLM-EGEWWRLFTSMFVHFGMDHLVSNTISLLLIGVSLEQHCGHIR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGK-KEIVSVGASGALFGLLGTMLS-ELIANWTIYANKCT 186
+Y+L G G+ S L G ++ VS GASGA+F +LG ++ LI T AN
Sbjct: 101 FLLIYILGGLAGNGFSLLIEGGSPQQAVSAGASGAVFAILGGYIALALIWKRTGVANINL 160
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
L+++ + + G GV+ AH+GG A+G LG +L RP + ++
Sbjct: 161 VLTIVAAGYMFYRSMG-----TGVNVEAHLGGLAAGFFLG-LLLCRPAWSRTRKE 209
>gi|255282943|ref|ZP_05347498.1| putative small hydrophobic molecule transporter protein [Bryantella
formatexigens DSM 14469]
gi|255266482|gb|EET59687.1| peptidase, S54 family [Marvinbryantia formatexigens DSM 14469]
Length = 205
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 13/150 (8%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+ +K + YRL + M+LH G HL NM L LE+ G R +YL G G++L
Sbjct: 54 VTQKGEYYRLFTCMFLHFGWQHLFYNMLLLWFAGDMLEERSGPVRYLVIYLAGGVAGNVL 113
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSV----LGSVIALNL 199
S L ++++VS GASGA+F ++G ++ W + N+ + L + L+L
Sbjct: 114 SFLTGM-ERQVVSAGASGAVFAVIGALV------WLVVKNRGKVEGIDNRGLCMMAVLSL 166
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
A GF+ GVD++AH+GGF G LL +L
Sbjct: 167 AQGFMDA--GVDHMAHLGGFIGGFLLAAVL 194
>gi|227494200|ref|ZP_03924516.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
gi|226831934|gb|EEH64317.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
Length = 309
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 84/171 (49%), Gaps = 26/171 (15%)
Query: 82 NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS 141
N I+ + +R L+ M +H G+IHL +NM SL LV LE+ G R LY+ SG GGS
Sbjct: 123 NPILGYKEPWRFLTVMLVHGGLIHLALNMYSLYLVGNSLERVLGTYRYLALYVASGLGGS 182
Query: 142 L---------LSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
L L +H V+VGASGA+FGL A + + +G
Sbjct: 183 LAVLLWAMVSLDSFYH------VTVGASGAIFGLFA-------AVYVVQRKSGMDARAMG 229
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL--FLRPQYGYVSEK 241
++A+NLA GF + V H+GG G L+ L F P+ G+++ +
Sbjct: 230 ILLAVNLALGFT--ISNVSWQGHLGGMIVGALMSLALLRFALPRPGWLASE 278
>gi|299538296|ref|ZP_07051581.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|424736343|ref|ZP_18164803.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
gi|298726498|gb|EFI67088.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|422949946|gb|EKU44319.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 12/169 (7%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
PSI TL G+ N +++ + +R+ S+++LHAG +H+ NM SL L LE+ G A
Sbjct: 35 PSIGTLLWNYGIQANFLIQSGEWWRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIAGKA 94
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YL+SG G++ + + + S+GASGA+FG+ G Y +
Sbjct: 95 RFITIYLVSGIVGNMATYIFY--DSSYASLGASGAIFGIFGAF-----GALVYYTRRTMP 147
Query: 188 L--SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ ++ +I +++ F+ V+ AH+GG +G +LG +++L P+
Sbjct: 148 MLRKLILPIIVISVIMTFLQ--PNVNVFAHLGGLVTGFILG-LVYLHPK 193
>gi|417009713|ref|ZP_11945885.1| hypothetical protein AAULH_09078 [Lactobacillus helveticus MTCC
5463]
gi|328464817|gb|EGF36130.1| hypothetical protein AAULH_09078 [Lactobacillus helveticus MTCC
5463]
Length = 226
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+ L +G ++ +V +Q +RL ++ +LH G++HLV N + + +E G
Sbjct: 34 ENINVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHV 93
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R YLL+G GG+L S + +S GAS ALFGL G M++ + N +Y +
Sbjct: 94 RFLVTYLLAGIGGNLFSLAFSSDRG--LSAGASTALFGLFGAMVAIGLRN--LYNPMISF 149
Query: 188 LSVLGSVIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
L V+AL NLA F+P G+D HIGG +G LL IL R Y + + A
Sbjct: 150 LGRQALVLALINLALDIFVP---GIDIWGHIGGLITGFLLAIILGDRVMRTYNPKWRVLA 206
Query: 246 G 246
G
Sbjct: 207 G 207
>gi|260665468|ref|ZP_05866315.1| membrane-associated serine protease [Lactobacillus jensenii
SJ-7A-US]
gi|260560736|gb|EEX26713.1| membrane-associated serine protease [Lactobacillus jensenii
SJ-7A-US]
Length = 215
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 29/195 (14%)
Query: 70 ISTLRDLGGLDRNLIVRK------------NQKYRLLSSMWLHAGIIHLVVNMTSLMLVS 117
I TLR GG D + ++ K Q +RL ++ +LH G++HLVVN +L +
Sbjct: 15 IETLR--GGSDESAVLFKLGAQFNPAIIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMG 72
Query: 118 YRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIAN 177
LE G R +YLL+G GG+L++ G VS GAS ALFGL G M++ IAN
Sbjct: 73 QYLEPMLGHVRFLIIYLLAGVGGNLMTL--ALGSDNAVSAGASTALFGLFGAMIALGIAN 130
Query: 178 WT-----IYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
T + L+V+ + +N IP +D H+GG +G LL IL +
Sbjct: 131 RTHEGMAYLGRQSFVLAVINLLFDIN-----IP---QIDTWGHVGGLLAGFLLTVILGDQ 182
Query: 233 PQYGYVSEKYIAAGY 247
GY I AG+
Sbjct: 183 NLRGYKLPIKILAGF 197
>gi|451820893|ref|YP_007457094.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786872|gb|AGF57840.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 512
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + Q +R ++ M+LHA I+H+ +N +L L+ E+ FG A+ +Y ++G
Sbjct: 218 GSKENTSIIQGQYWRFITPMFLHANIMHVALNCYTLYLIGKLSERIFGKAKFITIYFIAG 277
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
G++ S + VGASGA+FGL G +L + I ++ + ++LG+++ +
Sbjct: 278 ILGNIFSFAFNSNP----GVGASGAIFGLFGAVLFKCIEKPALFKSGLGP-NILGAIL-I 331
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASG 222
NL +GF G+DN AH+GG G
Sbjct: 332 NLFYGFSKS--GIDNFAHLGGLIGG 354
>gi|15613984|ref|NP_242287.1| hypothetical protein BH1421 [Bacillus halodurans C-125]
gi|10174038|dbj|BAB05140.1| BH1421 [Bacillus halodurans C-125]
Length = 514
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + +RLLSSM+LH GI+H ++N +L + +E+ +G +R +Y ++G
Sbjct: 219 GAKYNPAIADGEWWRLLSSMFLHIGILHFMMNSLALFYLGGTVERIYGTSRFFIIYFIAG 278
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GS+ S VS GASGA+FG G +L + ++ S +L ++
Sbjct: 279 LAGSIASF----ALNAHVSAGASGAIFGCFGALLYFGTVHKKLFFRTMGSSVLL--ILVF 332
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL---RPQ 234
NLAFGFI + +DN AHIGG G L ++ L RP+
Sbjct: 333 NLAFGFI--IPMIDNGAHIGGLIGGFLASAVVHLPNHRPR 370
>gi|156085258|ref|XP_001610111.1| rhomboid 4 [Babesia bovis]
gi|154797363|gb|EDO06543.1| rhomboid 4 [Babesia bovis]
Length = 783
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 59 PWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
P NY +G T+ +G L N I + RLL+S++LH G HL+ N ML+ Y
Sbjct: 460 PDGPNYRIG----TI--VGALSANTIRIYGESSRLLTSIFLHGGRWHLLCNCLMNMLLLY 513
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
+E ++GF R LY+ G+ +L +H I GASG+LF L G + + +W
Sbjct: 514 VIEPDWGFKRTLALYIFGGYSANL---VHASMSPCIPCWGASGSLFSLYGAFIPYTVEHW 570
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
N + ++++ I ++L +PGV GV N AH+GGFA G+ GF
Sbjct: 571 D---NLRSPMALIVIAITISLLEIILPGV-GVSNHAHLGGFAFGLCFGF 615
>gi|116333635|ref|YP_795162.1| membrane-associated serine protease [Lactobacillus brevis ATCC 367]
gi|116098982|gb|ABJ64131.1| Membrane-associated serine protease [Lactobacillus brevis ATCC 367]
Length = 226
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++++ Q +RL++ M+LH G H+ +NM +L V +LE FG AR ++L++G
Sbjct: 48 GAKVNPLIQQGQWWRLITPMFLHIGFTHIFLNMVTLYFVGTQLEAAFGHARFLIIFLVAG 107
Query: 138 FGGSLLS-CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIA 196
GG++ S C + +S GAS A+FGL G + + W + + + L V+
Sbjct: 108 IGGNVASFCFLNS-----LSAGASTAIFGLFGAFMMLGESFWQNPIIRQLARTFLAFVV- 161
Query: 197 LNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
+N+AF F PG+D H+GG +G L+ + + + PQ G VS
Sbjct: 162 MNIAFDLFTPGIDLA---GHLGGLIAGFLVAYTVGV-PQIGRVS 201
>gi|374340237|ref|YP_005096973.1| hypothetical protein Marpi_1272 [Marinitoga piezophila KA3]
gi|372101771|gb|AEX85675.1| putative membrane protein [Marinitoga piezophila KA3]
Length = 235
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 82 NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS 141
LI +Q +R ++++++H GI+H+ N+ +L + +E+ +G + +YL SG GG
Sbjct: 53 KLITIYHQYFRFITALFVHGGILHISFNLYALYYLGNIVERVYGPYKFLTIYLASGIGGG 112
Query: 142 LLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAF 201
+L+ + SVGASGA+FGL+G + + T K + + L VI +NL
Sbjct: 113 ILTQIF---IPNAFSVGASGAIFGLIGLLFGAGFRDDTPPMLKPMTGTALLPVILINLFL 169
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
GF G++N AHIGG G G++ +R Y
Sbjct: 170 GFTS--SGINNFAHIGGLLVGFTFGWLTSVRDTY 201
>gi|104774327|ref|YP_619307.1| hypothetical protein Ldb1479 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423408|emb|CAI98279.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 215
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 62 ENYLLGP-SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E ++ G S S L +G + +V + Q +RL ++ +LH GI+H+ N + +
Sbjct: 16 ETFMGGSESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYA 75
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E FG R +YLLSG GGSLL+ G + +S GAS ALFGL G M +
Sbjct: 76 EPVFGHWRFLLIYLLSGVGGSLLTLAF--GNDQAISAGASTALFGLFGAMTCAGFKD--- 130
Query: 181 YANKCTSLSVLG----SVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
T LS LG ++ +NL F+P VD L H+GG +G LL IL
Sbjct: 131 --KDNTLLSFLGRQALALAVINLVLDVFMP---DVDILGHVGGLITGALLAVILGDATYK 185
Query: 236 GY 237
GY
Sbjct: 186 GY 187
>gi|417551284|ref|ZP_12202362.1| peptidase, S54 family [Acinetobacter baumannii Naval-18]
gi|417566181|ref|ZP_12217055.1| peptidase, S54 family [Acinetobacter baumannii OIFC143]
gi|395557937|gb|EJG23938.1| peptidase, S54 family [Acinetobacter baumannii OIFC143]
gi|400385739|gb|EJP48814.1| peptidase, S54 family [Acinetobacter baumannii Naval-18]
Length = 269
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ GL + + +
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFPPLPHQAYI 173
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
L ++A+NL FGF+ G++N AH+GG G LL FI +L R Q+
Sbjct: 174 LDKKALLMIMAINLIFGFV--ATGINNAAHVGGMIMGALLAFIWYLSYRTQF 223
>gi|336430826|ref|ZP_08610764.1| hypothetical protein HMPREF0994_06770 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336016582|gb|EGN46362.1| hypothetical protein HMPREF0994_06770 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 209
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++R + YRL+++M+LHA I HLV NM L +E+ G R L+ +SG G+LL
Sbjct: 53 LIRSQEYYRLVTAMFLHADISHLVNNMILLYFGGEIVEKTIGSVRYLVLFFVSGICGNLL 112
Query: 144 SCLHHKGKKEIV-SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
+ + S+GASGA+FGL+G +L +I A +L +IAL+L G
Sbjct: 113 TAIFEVSTGMYFNSIGASGAVFGLIGGLLYLVITRKGYAAQISVRRMIL--MIALSLYSG 170
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFIL 229
F V+N AH+GG SG L+ FIL
Sbjct: 171 FQS--VRVNNAAHLGGLLSGFLITFIL 195
>gi|218557587|ref|YP_002390500.1| hypothetical protein ECS88_0691 [Escherichia coli S88]
gi|432361433|ref|ZP_19604618.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE5]
gi|218364356|emb|CAR02031.1| conserved hypothetical protein; putative membrane protein
[Escherichia coli S88]
gi|430889951|gb|ELC12598.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE5]
Length = 625
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG-FGGSLLSC 145
++ +RLLSS++LH+ HL++NM +L++V E+ G R+ ++L SG FGG + +C
Sbjct: 58 SDESWRLLSSVFLHSSFSHLLMNMFALLVVGTVAERILGKWRLLIIWLFSGIFGGLISAC 117
Query: 146 LHHKGKKEIV-SVGASGALFGLLGTMLSELIAN--WTIYANKCTSLSVLGSVIALNLAFG 202
+ ++IV S+GASGA+ G+ G ++ +A+ T + N+ +LG ++AL L +G
Sbjct: 118 YTLRESEQIVISIGASGAIMGIAGAAIATQLASGAGTHHKNQRRVFPLLG-MVALTLLYG 176
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFI 228
G+DN HIGG +G LG++
Sbjct: 177 TRQ--TGIDNACHIGGLIAGGTLGWL 200
>gi|219124310|ref|XP_002182450.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406411|gb|EEC46351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 522
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
N ++GP + GG + L+ +NQ +RLL+S +LH G++HL+ N ++ EQ
Sbjct: 298 NPMIGPYPDAFSEWGGKNAYLMTEENQWWRLLTSSFLHVGVLHLLANALCVIWSVAVFEQ 357
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
E+G R ++L+S G + + L G + + VG+SG L GL L+++++
Sbjct: 358 EWGSCRWLLVFLVSSVGCTACASL---GDADTIGVGSSGTLMGLYAAKLAQVMS------ 408
Query: 183 NKCTSLSVLGSV---IALNLAFGFIPGVDGVDNLA--HIGGFASGVLLGFILF 230
CT V S+ I + G + G+ + L+ H+GG +G L+G ++F
Sbjct: 409 --CTCFEVHKSLDGNIHYDRMCGVLVGIAILSMLSACHVGGLVTGFLVGILIF 459
>gi|91776194|ref|YP_545950.1| rhomboid-like protein [Methylobacillus flagellatus KT]
gi|91710181|gb|ABE50109.1| Rhomboid-like protein [Methylobacillus flagellatus KT]
Length = 356
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ + +RL ++++LH G +HL +NM + +E+ +G R +YL+SG G+LLS
Sbjct: 67 TQDGEWWRLFTALFLHFGAVHLALNMIAFWDGGQLVERMYGHWRYLVIYLVSGLVGNLLS 126
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI--ALNLAFG 202
+ + VS GASGA+FG+ G ++ L + + G+ + +A G
Sbjct: 127 LVWQ--GNQAVSGGASGAIFGIYGALIVFLWQERALLDRREFRWLFGGACVFATATIALG 184
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFILF--LRPQ 234
F+ + +DN AHIGGF +G+L G +L LRPQ
Sbjct: 185 FM--IPAIDNAAHIGGFVAGMLAGLLLMRGLRPQ 216
>gi|375088668|ref|ZP_09735006.1| hypothetical protein HMPREF9703_01088 [Dolosigranulum pigrum ATCC
51524]
gi|374561633|gb|EHR32972.1| hypothetical protein HMPREF9703_01088 [Dolosigranulum pigrum ATCC
51524]
Length = 232
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 19/166 (11%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I +L +G LI+ N+ +RL++ ++LH G+ HL+ NM + + ++E FG
Sbjct: 38 ENIESLIIMGAKFNELIIYNNEWWRLITPIFLHIGVPHLLFNMLVVYFLGQQIEFIFGHV 97
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGT--MLSELIANWTIYANKC 185
R A LYL SG G+ S + +S GAS A+FGL + +LS+L +
Sbjct: 98 RFALLYLFSGLMGNAFSFAFNTS----LSAGASTAIFGLFVSTIVLSKLFPH-------V 146
Query: 186 TSLSVL----GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
L +L G +I LN+ F F+ G GVDN+ HIGG G L+ +
Sbjct: 147 RELGMLARQYGMLIFLNIVFSFMSG--GVDNMGHIGGLVGGYLISY 190
>gi|315446599|ref|YP_004079478.1| hypothetical protein Mspyr1_51170 [Mycobacterium gilvum Spyr1]
gi|315264902|gb|ADU01644.1| uncharacterized membrane protein [Mycobacterium gilvum Spyr1]
Length = 279
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 35 NCPAKTADSHQCV------LRDILGRYSFQPWKENYLLGPSISTLR---DLGGLDRNL-- 83
C A HQC+ +R + P L+G ++ GL R
Sbjct: 37 ECMRDAAVGHQCIDCVGEGMRSVRPVKKLTPVVTYALIGINLLAFALQMASPGLQRAFGL 96
Query: 84 ---IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGG 140
V + YRLL+S +LH G+ HL NM +L V LE G AR LYL+S GG
Sbjct: 97 WSPAVADGEMYRLLTSAFLHFGLTHLAFNMLALYFVGPPLEAALGRARFVTLYLVSALGG 156
Query: 141 SLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLA 200
S+L L ++ GASGA+FGL G A + + + + ++I LNLA
Sbjct: 157 SVLVYLL---TFNALTAGASGAVFGLFG-------ATFVVGRKLNMDVRSVMAIIVLNLA 206
Query: 201 FGFIPGVDGVDNLA---HIGGFASGVLLGFILFLRPQ 234
F F+ + N++ HIGG +G L+ P+
Sbjct: 207 FTFLIPLFTSQNISWQGHIGGLVTGALVAAAFVYAPR 243
>gi|392393767|ref|YP_006430369.1| hypothetical protein Desde_2230 [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390524845|gb|AFM00576.1| putative membrane protein [Desulfitobacterium dehalogenans ATCC
51507]
Length = 275
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + +RL +SM+LH G +HL N+ +L + E+ G R +Y+LSG
Sbjct: 129 GAKVNALIIQGEYWRLFTSMFLHIGFLHLAFNLYALWALGPIAEELLGRIRYITVYILSG 188
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL------SVL 191
GS+ S L + +S GASGA+FG+LG ++ +Y+ + L L
Sbjct: 189 ILGSVASFLF----TDAISAGASGAIFGILGALV--------VYSRRKPFLWKSGFGKSL 236
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
VI +NL+ GF G+D AH+GG SG+LL +I ++
Sbjct: 237 AVVILINLSLGFFQ--TGIDVYAHMGGLVSGMLLTWIFSMK 275
>gi|418309099|ref|ZP_12920674.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21194]
gi|365235250|gb|EHM76170.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21194]
Length = 364
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSL---SFNTTTISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|110803398|ref|YP_698757.1| rhomboid family protein [Clostridium perfringens SM101]
gi|110683899|gb|ABG87269.1| rhomboid family protein [Clostridium perfringens SM101]
Length = 342
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G N I+ + YRL++SM+LH+GI+HL+ NM +L ++ +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHSGIVHLLFNMYALYILGDFIERIYGAKKYLVIYFV 248
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG S+ S ++ VGASGA+FGLLG L N K +++ +I
Sbjct: 249 SGIVASIFSLYF----SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNII-VII 302
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
LN+ G + +D AH GGF +G +LG
Sbjct: 303 LLNVFIGL--SMSNIDISAHFGGFIAGAILG 331
>gi|455648311|gb|EMF27191.1| hypothetical protein H114_20747 [Streptomyces gancidicus BKS 13-15]
Length = 295
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + YRL++SM+ H I H+ NM SL L+ LEQ G AR LYL+SG GS L+
Sbjct: 127 VADGEWYRLVTSMFTHEEIWHIGFNMLSLWLLGGPLEQHLGRARYLALYLISGLAGSALT 186
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L G S+GASGA+FGL G A + + + +++ +NL F
Sbjct: 187 YLLAGGGT--ASLGASGAVFGLFG-------ATAVLMRRLRYDMRPIVALLVINLVITF- 236
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G G+ AHIGG +GV++G+ + P+
Sbjct: 237 -GWSGIAWQAHIGGLVAGVVIGYAMVHAPR 265
>gi|168214465|ref|ZP_02640090.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|168216839|ref|ZP_02642464.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|422346116|ref|ZP_16427030.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
gi|170714094|gb|EDT26276.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|182381088|gb|EDT78567.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|373226738|gb|EHP49060.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
Length = 342
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G N I+ + YRL++SM+LH GI+HL+ NM +L ++ +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG S+ S ++ VGASGA+FGLLG L N K +++ +I
Sbjct: 249 SGIVASIFSLYF----SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNII-VII 302
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
LN+ G + +D AH GGF +G +LG
Sbjct: 303 LLNVFIGL--SMSNIDISAHFGGFIAGAILG 331
>gi|428183558|gb|EKX52415.1| hypothetical protein GUITHDRAFT_161181 [Guillardia theta CCMP2712]
Length = 352
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
++ + +RL++ + LHAG+ HL++N + + +LE+E+G A+IA +Y+ +G G++L
Sbjct: 164 LIAAGEYWRLITPIMLHAGLFHLLINAFTQCMFGIQLEREWGAAQIAIIYVCAGIYGNIL 223
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
S L + +S+G SGA+FGL G ++ + W + + +L S+ +
Sbjct: 224 SVLF---APQALSIGCSGAIFGLFGAQVAYITGMWRQLGDLQKKMLIL-SLSLSFIFIFV 279
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILF 230
GVD AH+GGF +G+++G F
Sbjct: 280 FSFSVGVDMSAHMGGFVAGMVMGLGYF 306
>gi|110799144|ref|YP_696141.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|168206356|ref|ZP_02632361.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
gi|169347261|ref|ZP_02866200.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|110673791|gb|ABG82778.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|169296657|gb|EDS78788.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|170662212|gb|EDT14895.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
Length = 342
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G N I+ + YRL++SM+LH GI+HL+ NM +L ++ +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG S+ S ++ VGASGA+FGLLG L N K +++ +I
Sbjct: 249 SGIVASIFSLYF----SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNII-VII 302
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
LN+ G + +D AH GGF +G +LG
Sbjct: 303 LLNVFIGL--SMSNIDISAHFGGFIAGAILG 331
>gi|417897083|ref|ZP_12541026.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21235]
gi|341840349|gb|EGS81869.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21235]
Length = 372
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTTT---ISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|374310995|ref|YP_005057425.1| Peptidase S54, rhomboid domain protein [Granulicella mallensis
MP5ACTX8]
gi|358753005|gb|AEU36395.1| Peptidase S54, rhomboid domain protein [Granulicella mallensis
MP5ACTX8]
Length = 284
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 25/196 (12%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
++TL GG D ++ Q +RL++S ++H I+HLV+NM L + E G
Sbjct: 66 DVNTLLRFGGSDAAYVM-NGQWWRLITSTFVHVTILHLVLNMWCLWNLGLFGEPLLGRPG 124
Query: 129 IAPLYLLSGFGGSLLS-CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
+ +YLL+G G +LS L +++ + GASGA+FGL G ++ L++N + A
Sbjct: 125 LIAVYLLTGTAGMMLSLTLSVAQQQDSLVAGASGAIFGLAGILIV-LLSNRKLAAPWKEL 183
Query: 188 LSVLGSVI---ALNLAFGFIPGV-----DG--------------VDNLAHIGGFASGVLL 225
S+ SVI LNL G +P DG +DN AH+GGF SG+ L
Sbjct: 184 RSLRRSVIWFAVLNLVIGLLPQALPAFSDGQLARLHLSPDSLPHIDNSAHLGGFLSGLAL 243
Query: 226 GFILFLRPQYGYVSEK 241
GF LF R G S +
Sbjct: 244 GFPLFPRMTSGKSSYR 259
>gi|333395939|ref|ZP_08477756.1| membrane-associated serine protease [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
gi|420145094|ref|ZP_14652570.1| Membrane-associated serine protease [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398403329|gb|EJN56584.1| Membrane-associated serine protease [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 223
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 21/155 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N+++++ Q +RL+ ++LH+G++H+ VN +L + ++E FG R +YLLSG
Sbjct: 45 GAKVNILIQQGQWWRLIMPIFLHSGLMHIAVNSVTLYFIGMQIESLFGHWRFTLIYLLSG 104
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGT--MLSELIANWTIYANKCTSLSVLGS-- 193
G++ S + + G +SVGAS ALFGL G ML E + T++ +G
Sbjct: 105 IVGNIASFVFNMG----ISVGASTALFGLFGAFFMLVEAF-------RQNTAIRAMGQQF 153
Query: 194 --VIALNLAFG-FIPGVDGVDNLAHIGGFASGVLL 225
I LNLAF F PG+D H+GG G L+
Sbjct: 154 ALFIVLNLAFDLFNPGIDLA---GHVGGLLGGFLV 185
>gi|88195357|ref|YP_500161.1| rhomboid family protein, partial [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|87202915|gb|ABD30725.1| rhomboid family protein [Staphylococcus aureus subsp. aureus NCTC
8325]
Length = 336
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSL---SFNTTTISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|422874373|ref|ZP_16920858.1| rhomboid family protein [Clostridium perfringens F262]
gi|380304681|gb|EIA16968.1| rhomboid family protein [Clostridium perfringens F262]
Length = 342
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G N I+ + YRL++SM+LH GI+HL+ NM +L ++ +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG S+ S ++ VGASGA+FGLLG L N K +++ +I
Sbjct: 249 SGIVASIFSLYF----SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNII-VII 302
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
LN+ G + +D AH GGF +G +LG
Sbjct: 303 LLNVFIGL--SMSNIDISAHFGGFIAGAILG 331
>gi|430376422|ref|ZP_19430825.1| rhomboid-like protein [Moraxella macacae 0408225]
gi|429541653|gb|ELA09681.1| rhomboid-like protein [Moraxella macacae 0408225]
Length = 265
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 42/217 (19%)
Query: 22 VCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDR 81
+C+++FV + D+ ++D+L W N+L P
Sbjct: 33 ICVVLFVLQV------LTGVDASSPTVQDLL------KWGANFL--P------------- 65
Query: 82 NLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS 141
+ N+ +RL++S+ LH G++HL+ NM +L EQ G + L++LSG GG+
Sbjct: 66 --LTMGNEPFRLITSLVLHIGLLHLMFNMYALYYFGQVAEQMIGSINLLILFVLSGIGGN 123
Query: 142 LL-------SCLHHK--GKKEI-VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
LL + L+++ + +I VS GASG + G+ +L + I S+L
Sbjct: 124 LLNNFLALQTLLNNESINRGQIGVSAGASGGIMGIGAALLMTALLRTPINQIGLNFRSLL 183
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
V+A+NL++GF+ V G+DN HIGG +G +LGF+
Sbjct: 184 -LVMAINLSYGFL--VSGIDNAGHIGGALTGAMLGFV 217
>gi|331676317|ref|ZP_08377029.1| outer membrane protein [Escherichia coli H591]
gi|417600998|ref|ZP_12251581.1| rhomboid family protein [Escherichia coli STEC_94C]
gi|331076375|gb|EGI47657.1| outer membrane protein [Escherichia coli H591]
gi|345353483|gb|EGW85716.1| rhomboid family protein [Escherichia coli STEC_94C]
Length = 265
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 86/145 (59%), Gaps = 7/145 (4%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG-FGGSLLSC 145
+ +RL SS++LH+ HL++NM +L++V E+ G R+ ++L SG FGG + +C
Sbjct: 58 SGESWRLFSSVFLHSSFSHLLMNMFALLVVGAVAERILGKWRLLIIWLFSGVFGGLISAC 117
Query: 146 LHHKGKKEIV-SVGASGALFGLLGTMLSELIAN--WTIYANKCTSLSVLGSVIALNLAFG 202
+ +IV SVGASGA+ G+ G L+ +A+ T + N+ S+LG ++AL L +G
Sbjct: 118 YALRDSDQIVISVGASGAIMGIAGAALATQLASGAGTYHKNQRRVFSLLG-MVALTLLYG 176
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGF 227
G+DN HIGG +G +G+
Sbjct: 177 ARQA--GIDNACHIGGLIAGGAMGW 199
>gi|319957644|ref|YP_004168907.1| rhomboid family protein [Nitratifractor salsuginis DSM 16511]
gi|319420048|gb|ADV47158.1| Rhomboid family protein [Nitratifractor salsuginis DSM 16511]
Length = 230
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
+S+L GG+ ++ + +RLLS ++LH G HL +NM SL +V +E F
Sbjct: 36 VSSLIACGGVYAPAVLEGGEWWRLLSGLFLHGGPEHLALNMISLYIVGRIVELYFPLLDY 95
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY-ANKCTSL 188
LY LSG GG L+S H E V +GASGA+FGL G + + + + A+ +
Sbjct: 96 LILYFLSGIGGFLVSMTLH---PETVIIGASGAIFGLFGALGGFMFFHRERFGASYRAFV 152
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
G+++A+NL F + V G+D AHI G G++ G++
Sbjct: 153 REFGAILAINLIFDLL--VPGIDLSAHITGLILGIIGGYL 190
>gi|420187246|ref|ZP_14693267.1| rhomboid family protein [Staphylococcus epidermidis NIHLM039]
gi|394256225|gb|EJE01158.1| rhomboid family protein [Staphylococcus epidermidis NIHLM039]
Length = 486
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 11/146 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI-LFLRPQ 234
++ +AH+GGF SGVL+ I F + Q
Sbjct: 314 INIMAHLGGFISGVLITLIGYFFKTQ 339
>gi|403331813|gb|EJY64875.1| hypothetical protein OXYTRI_14975 [Oxytricha trifallax]
Length = 319
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 59 PWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
P + LGPS+ TL G + + Q +R + ++LHAG +H+ NM S M++ +
Sbjct: 100 PLDNDNFLGPSVITLNQFGSNNPFRMRYDIQLWRFFTPIFLHAGFMHIFSNMLSQMIIGF 159
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
LE G R+ LYL+SG GG+L S L K +SVGAS ++FGLL +LS ++ NW
Sbjct: 160 MLESIMGPFRVGLLYLVSGIGGNLFSALCAPDK---LSVGASTSIFGLLACLLSLVLVNW 216
>gi|418621400|ref|ZP_13184176.1| peptidase, S54 family [Staphylococcus epidermidis VCU123]
gi|374829344|gb|EHR93148.1| peptidase, S54 family [Staphylococcus epidermidis VCU123]
Length = 394
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L ++GGL +V + YRL+SSM+LH H+++NM SL + +E
Sbjct: 177 YLNRFSDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y++SG G+ +S + +SVGASGA+FGL+G++ +Y +
Sbjct: 236 IGSWRMLIIYIISGLYGNFVSLSFNTTT---ISVGASGAIFGLIGSIFV------IMYLS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + ++G +IAL + F + ++ +AH+GGF SGVL+ I
Sbjct: 287 KNFNKKMIGQLLIALVVLIVFSLFMSNINIMAHLGGFISGVLITLI 332
>gi|432601198|ref|ZP_19837451.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE66]
gi|431143593|gb|ELE45316.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE66]
Length = 625
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 86/142 (60%), Gaps = 7/142 (4%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG-FGGSLLSCLH 147
+ +RLLSS++LH+ HL++NM +L++V E+ G R+ ++L SG FGG +C
Sbjct: 60 ESWRLLSSVFLHSSFPHLLMNMFALLVVGAVAERILGKWRLLIIWLFSGVFGGLTSACYA 119
Query: 148 HKGKKEIV-SVGASGALFGLLGTMLSELIAN--WTIYANKCTSLSVLGSVIALNLAFGFI 204
+ ++IV SVGASGA+ G+ G ++ +A+ T + N+ S+LG ++AL L +G
Sbjct: 120 LRESEQIVISVGASGAIMGIAGAAIATQLASGAGTYHKNQRRVFSLLG-MVALTLLYG-- 176
Query: 205 PGVDGVDNLAHIGGFASGVLLG 226
G+DN HIGG +G +G
Sbjct: 177 ARQTGIDNACHIGGLIAGGAMG 198
>gi|56420981|ref|YP_148299.1| hypothetical protein GK2446 [Geobacillus kaustophilus HTA426]
gi|56380823|dbj|BAD76731.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 390
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +RLL+ M+LH G +HL+ N +L + +E+ +G R +Y+ +G
Sbjct: 216 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 275
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + ++V+ S+
Sbjct: 276 FFGALASFLFTPS----LSAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVI-SL 326
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
I +NL FG + V G+DN HIGG G L
Sbjct: 327 IIVNLLFGLL--VPGIDNAGHIGGLVGGFL 354
>gi|426201783|gb|EKV51706.1| hypothetical protein AGABI2DRAFT_62207 [Agaricus bisporus var.
bisporus H97]
Length = 377
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
Query: 58 QPWKENYLLGPS-ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
QP N P T +L G +Q +R ++ ++LHAGIIH ++NM +
Sbjct: 118 QPCLNNTANPPDRFCTTEELCGFGGFHGEEPSQWFRFITPIFLHAGIIHFLLNMLGQWFL 177
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
S ++E+E G A Y +G G++L + I SVGASGA+ G L +LIA
Sbjct: 178 SAQIEREMGSAGFIITYFAAGIFGNVLG--GNFALVGIPSVGASGAIMGTLAVTWVDLIA 235
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDN------LAHIGGFASGVLLGFILF 230
+W + L + + +++A G+IP LAHIGGF G+L+G + +
Sbjct: 236 HWKYHYRPVRQLIFMFIELLISIAIGYIPCKSFSSCPYSPCLLAHIGGFVMGLLVGIVFY 295
>gi|443626016|ref|ZP_21110448.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
gi|443340440|gb|ELS54650.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
Length = 313
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + Q YRLL+SM+LH IH++ NM SL + LE G R LYL+SG GS L+
Sbjct: 145 VAEGQWYRLLTSMFLHGSYIHILFNMLSLWWIGGPLEAALGRVRYIALYLVSGLAGSALT 204
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L + S+GASGA+FGL G A + + + +++ +NL F F
Sbjct: 205 YLIAAANQP--SLGASGAIFGLFG-------ATAVLMRRLQYDMRPVIALLVINLIFTF- 254
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G+ + AHIGG +G+L+G+ + P+
Sbjct: 255 -GLAQIAWQAHIGGLVAGLLVGYAMVHAPR 283
>gi|168058279|ref|XP_001781137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667455|gb|EDQ54085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ K Q +R ++ LHA I+HL+VN SL V +E G R +Y +S
Sbjct: 209 GAKVNSLIDKGQWWRFVTPSVLHANIMHLLVNCYSLNSVGPTVESLSGGKRFLAIYAVSA 268
Query: 138 FGGSLLS---CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
S LS C SVGASGA+FGL+G + L + T+ SL+ + V
Sbjct: 269 IASSGLSYTLC-------TAPSVGASGAIFGLVGALAVFLARHKTLMIGGDQSLAQVARV 321
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
IA+NL FG + G+DN H+GG G + ++L
Sbjct: 322 IAINLGFGLLS--SGIDNWGHVGGLFGGAAVAWLL 354
>gi|375009531|ref|YP_004983164.1| Rhomboid [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288380|gb|AEV20064.1| Rhomboid [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 389
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +RLL+ M+LH G +HL+ N +L + +E+ +G R +Y+ +G
Sbjct: 215 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 274
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + ++V+ S+
Sbjct: 275 FFGALASFLFTPS----LSAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVI-SL 325
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
I +NL FG + V G+DN HIGG G L
Sbjct: 326 IIVNLLFGLL--VPGIDNAGHIGGLVGGFL 353
>gi|339235851|ref|XP_003379480.1| peptidase, S54 family [Trichinella spiralis]
gi|316977860|gb|EFV60908.1| peptidase, S54 family [Trichinella spiralis]
Length = 966
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+ +Q RL+ ++LHAGIIH + + + LE+ G++R+A +Y++SG GG L S
Sbjct: 540 QPDQFSRLIIPLFLHAGIIHCFITVVIQYFLLRDLEKLVGWSRVAVIYMISGVGGYLGSA 599
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ + E VG +G+ FGLL ++ +++ +W + A +L L + I G +P
Sbjct: 600 VFVPYQAE---VGPAGSQFGLLAGLVVDVVYSWEMIARPWKALGQLLAFIVFLFILGLLP 656
Query: 206 GVDGVDNLAHIGGFASGVLLGFILF 230
+DN AH GF G+LL LF
Sbjct: 657 ---WIDNYAHAFGFVFGLLLSLALF 678
>gi|374313630|ref|YP_005060060.1| Peptidase S54, rhomboid domain protein [Granulicella mallensis
MP5ACTX8]
gi|358755640|gb|AEU39030.1| Peptidase S54, rhomboid domain protein [Granulicella mallensis
MP5ACTX8]
Length = 225
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 8/169 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P+ + + GG L V +Q +RLL+S +LH GIIH+ NM L + +E FG
Sbjct: 48 PTALDVANWGGDFGPLTVGAHQWWRLLTSCFLHFGIIHIGFNMYVLFQIGPFIEMAFGRI 107
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT- 186
R +Y +G GGSL+S H +V GASGA+FGL G + L+ N T
Sbjct: 108 RYLLIYFFAGLGGSLVSVWVH---PMVVGAGASGAIFGLYGAVFGFLLRNRRSLDPAVTK 164
Query: 187 SLSVLGSVIAL-NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
S++ + L N+ +G I D AH GG +G ++G +L +RP+
Sbjct: 165 SIAKSAGIFVLYNVVYGSI--TRTTDLSAHFGGLVTGFVVG-MLLIRPR 210
>gi|418029655|ref|ZP_12668189.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|354689534|gb|EHE89520.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
Length = 209
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 62 ENYLLGP-SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E ++ G S S L +G + +V + Q +RL ++ +LH GI+H+ N + +
Sbjct: 10 ETFMGGSESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYA 69
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E FG R +YLLSG GGSLL+ G + +S GAS ALFGL G M +
Sbjct: 70 EPVFGHWRFLLIYLLSGVGGSLLTLAF--GNDQAISAGASTALFGLFGAMTCAGFKD--- 124
Query: 181 YANKCTSLSVLG----SVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
T LS LG ++ +NL F+P VD L H+GG +G LL IL
Sbjct: 125 --KDNTLLSFLGRQALALAVINLVLDVFMP---DVDILGHLGGLITGALLAVILGDATYK 179
Query: 236 GY 237
GY
Sbjct: 180 GY 181
>gi|379014757|ref|YP_005290993.1| putative rhomboid family protein, truncated, partial
[Staphylococcus aureus subsp. aureus VC40]
gi|374363454|gb|AEZ37559.1| putative rhomboid family protein, truncated [Staphylococcus aureus
subsp. aureus VC40]
Length = 423
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTTT---ISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|260555921|ref|ZP_05828141.1| rhomboid family protein [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|421651444|ref|ZP_16091813.1| peptidase, S54 family [Acinetobacter baumannii OIFC0162]
gi|425747776|ref|ZP_18865774.1| peptidase, S54 family [Acinetobacter baumannii WC-348]
gi|445456314|ref|ZP_21445760.1| peptidase, S54 family [Acinetobacter baumannii OIFC047]
gi|260410832|gb|EEX04130.1| rhomboid family protein [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|408508054|gb|EKK09741.1| peptidase, S54 family [Acinetobacter baumannii OIFC0162]
gi|425492815|gb|EKU59067.1| peptidase, S54 family [Acinetobacter baumannii WC-348]
gi|444778260|gb|ELX02278.1| peptidase, S54 family [Acinetobacter baumannii OIFC047]
gi|452954332|gb|EME59736.1| hypothetical protein G347_03500 [Acinetobacter baumannii MSP4-16]
Length = 269
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 90/177 (50%), Gaps = 26/177 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +S++ H GIIHL++NM +L + E F + LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSVFFHFGIIHLMLNMGALYIFGNVAEVLFSRSYFIILYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ G LGT L+ L +++
Sbjct: 114 VFGSLLSSYINIQNGYELLQHFDQSLLPHVSAGASGAIMG-LGTALTVL----SLFPPLP 168
Query: 186 TSLSVLGS-----VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
+ +L +A+NL FGFI G++N AH+GG G LL FI +L R Q+
Sbjct: 169 HQVRILNKKVYLVTMAINLIFGFI--ATGINNAAHVGGMIMGALLAFIWYLSYRTQF 223
>gi|320592945|gb|EFX05354.1| rhomboid family membrane protein [Grosmannia clavigera kw1407]
Length = 734
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+ +Q +R + M++HAG+IH+ NM + + +E+ G R +Y+ SG G +L
Sbjct: 472 QPDQWFRFIVPMFMHAGLIHIGFNMMLQLTMGRDMERAIGSIRFFIVYICSGIFGFVLG- 530
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ I S GASGALFG++ L +L+ +W N L + + ++ G +P
Sbjct: 531 -GNYAATGISSTGASGALFGVIALTLLDLLYSWRDRRNPVKDLMFIFLDVLISFVLGLLP 589
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G+DN +HIGGF G+ LG + P
Sbjct: 590 ---GLDNFSHIGGFFMGLALGVSVLHSPN 615
>gi|387929721|ref|ZP_10132398.1| serine protease of Rhomboid family [Bacillus methanolicus PB1]
gi|387586539|gb|EIJ78863.1| serine protease of Rhomboid family [Bacillus methanolicus PB1]
Length = 518
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 8/152 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G NL++ + + +R + ++LH G++HL++N SL + +E+ +G R +YL +G
Sbjct: 215 GAKFNLLIIEGEWWRFFTPIFLHVGLLHLLMNTLSLYYLGTVVERLYGNVRFLLIYLFAG 274
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
F GSL S + +S GASGA+FG G +L + + ++ + +++L V+ +
Sbjct: 275 FAGSLTSFVFSPS----LSAGASGAIFGCFGALLYFGVIHPGLFF-RTMGMNIL-VVLGI 328
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
NLA GF + G+DN HIGG G L IL
Sbjct: 329 NLALGFT--LPGIDNAGHIGGLIGGFLAAGIL 358
>gi|212638734|ref|YP_002315254.1| serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus WK1]
gi|212560214|gb|ACJ33269.1| Serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus WK1]
Length = 517
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + +R + + LH G +HL +N +L + +E+ +G R +YL +G
Sbjct: 221 GAKFNPLILQGEWWRFFTPIVLHIGFVHLFMNTFALYYLGPLVEKLYGSLRFLFIYLFAG 280
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
F GSL S L VS GASGA+FG G +L A I+ + ++V+ +VI +
Sbjct: 281 FAGSLASFLFSPS----VSAGASGAIFGCFGALLYFGKAKPHIFF-RTIGMNVI-TVIGI 334
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
NLAFG + V +DN HIGG G L I+
Sbjct: 335 NLAFGLV--VPNIDNAGHIGGLIGGFLAASIV 364
>gi|156378550|ref|XP_001631205.1| predicted protein [Nematostella vectensis]
gi|156218241|gb|EDO39142.1| predicted protein [Nematostella vectensis]
Length = 587
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 60 WKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLH--------AGIIHLVVNMT 111
W E+ LL + + + G D Q YRL+S+++LH GIIHL++N+
Sbjct: 251 WNEDKLLCSEVKCINSVCGGDDT--SGPGQGYRLMSAVFLHLGNYGNCLHGIIHLLLNLI 308
Query: 112 SLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML 171
+++ +E E G R A +YL+SG GGSL+S + + VG+SGALFGL+ ML
Sbjct: 309 FQVIIGRMIEIEIGTIRTACIYLVSGLGGSLVSGVFTPLTPQ---VGSSGALFGLIALML 365
Query: 172 SELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
+ + +L +L S+I L A G +P V N HIGGF G+L +L
Sbjct: 366 AHYCYYYPSLRRPYWNLPILLSIIILCFALGTLP---YVGNFVHIGGFVFGLLTTVVLTR 422
Query: 232 RPQYGYV 238
R G+
Sbjct: 423 RGTVGWA 429
>gi|297205734|ref|ZP_06923129.1| S54 family peptidase [Lactobacillus jensenii JV-V16]
gi|297148860|gb|EFH29158.1| S54 family peptidase [Lactobacillus jensenii JV-V16]
Length = 229
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 71 STLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIA 130
+ L LG ++ Q +RL ++ +LH G++HLVVN +L + LE G R
Sbjct: 40 AVLFKLGAQFNPAVIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHVRFL 99
Query: 131 PLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSV 190
+YLL+G GG+L++ G VS GAS ALFGL G M++ IAN T ++
Sbjct: 100 IIYLLAGVGGNLMTLAF--GSDNAVSAGASTALFGLFGAMIALGIANRT-----HEGMAY 152
Query: 191 LGS----VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
LG + +NL F V +D H+GG +G LL IL + GY
Sbjct: 153 LGRQSFVLAVINLLFDI--NVPQIDTWGHVGGLIAGFLLTVILGDQNLRGY 201
>gi|429852564|gb|ELA27696.1| rhomboid family membrane protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 606
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 36 CPAKTAD-----SHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP T+ S+QC L D+ G K GLD++ +Q
Sbjct: 323 CPNSTSSDANNPSNQCGLGDLCGFGGVPEPK--------------FEGLDQS--PEPDQW 366
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++LHAG+IH+ N+ M + +E G R +Y+ +G G+++ +
Sbjct: 367 FRFITPIFLHAGLIHIGFNLLLQMTIGKEMEIAIGSIRFFLVYVSAGIFGNVMGANY--A 424
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
S GASGALFG++ L +L+ +W + L + I ++ G +P G+
Sbjct: 425 GVMTASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFIMLDIVISFVLGLLP---GL 481
Query: 211 DNLAHIGGFASGVLLGFILFLRPQ 234
DN AHIGGF G+ LG + P
Sbjct: 482 DNFAHIGGFLMGLALGICVLHSPN 505
>gi|402298353|ref|ZP_10818053.1| rhomboid protein membrane-associated serine peptidase [Bacillus
alcalophilus ATCC 27647]
gi|401726454|gb|EJS99682.1| rhomboid protein membrane-associated serine peptidase [Bacillus
alcalophilus ATCC 27647]
Length = 519
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
SI TL ++G LI+ + +R+++SM++H G +HL++N +L + +E+ +G R
Sbjct: 214 SILTLVEVGAKYSPLIL-DGEWWRIITSMFIHIGFLHLLMNSLALYFLGTLVERIYGSFR 272
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+Y +G G+L+S + + GASGA+FGL G +L N+ +
Sbjct: 273 FVFIYFTAGVIGTLVSFWMNLS----IGAGASGAIFGLFGALLY-FGLNYRKLFFRTMGA 327
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
+VL V+A+NLAFGF+ V VDN AH+GG G L +++ L Q V +
Sbjct: 328 NVL-IVLAINLAFGFLIPV--VDNSAHVGGLIGGFLAAYVIQLPKQKKSVKQ 376
>gi|116514421|ref|YP_813327.1| membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|116093736|gb|ABJ58889.1| Membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
Length = 223
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 62 ENYLLGP-SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E ++ G S S L +G + +V + Q +RL ++ +LH GI+H+ N + +
Sbjct: 24 ETFMGGSESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYA 83
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E FG R +YLLSG GGSLL+ G + +S GAS ALFGL G M +
Sbjct: 84 EPVFGHWRFLLIYLLSGVGGSLLTLAF--GNDQAISAGASTALFGLFGPMTCAGFKD--- 138
Query: 181 YANKCTSLSVLG----SVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
T LS LG ++ +NL F+P VD L H+GG +G LL IL
Sbjct: 139 --KDNTLLSFLGRQALALAVINLVLDVFMP---DVDILGHLGGLITGALLAVILGDATYK 193
Query: 236 GY 237
GY
Sbjct: 194 GY 195
>gi|297529385|ref|YP_003670660.1| rhomboid family protein [Geobacillus sp. C56-T3]
gi|297252637|gb|ADI26083.1| Rhomboid family protein [Geobacillus sp. C56-T3]
Length = 386
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +RLL+ M+LH G +HL+ N +L + +E+ +G R +Y+ +G
Sbjct: 212 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 271
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + ++V+ S+
Sbjct: 272 FFGALASFLFTPS----LSAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVI-SL 322
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
I +NL FG + V G+DN HIGG G L
Sbjct: 323 IIVNLLFGLL--VPGIDNAGHIGGLVGGFL 350
>gi|418411961|ref|ZP_12985227.1| hypothetical protein HMPREF9281_00831 [Staphylococcus epidermidis
BVS058A4]
gi|410891544|gb|EKS39341.1| hypothetical protein HMPREF9281_00831 [Staphylococcus epidermidis
BVS058A4]
Length = 486
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|420211212|ref|ZP_14716586.1| rhomboid family protein [Staphylococcus epidermidis NIHLM001]
gi|394281665|gb|EJE25891.1| rhomboid family protein [Staphylococcus epidermidis NIHLM001]
Length = 486
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 T---ISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|324503187|gb|ADY41389.1| Rhomboid family member 1 [Ascaris suum]
Length = 952
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 7/170 (4%)
Query: 62 ENYLLGPSISTLRDLGG-LDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
EN L +S L ++ G L L + +Q YRL ++LHAGIIH + + L
Sbjct: 717 ENATLCSQVSCLGEICGMLPFMLKDQPDQFYRLFIPIFLHAGIIHCAITVLVQWYYMRDL 776
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E+ G+AR+A +Y+ +G GGSL S + + E VG +G+ G+ M +++I NW +
Sbjct: 777 EKLIGWARMAIVYMGAGIGGSLASAIFLPYRPE---VGPAGSHIGIFAAMYTDIIYNWRL 833
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
++L L + G +P +DN AH+ GF G LL F
Sbjct: 834 IQRPWSALRELAMFTLVLFICGLLP---WIDNWAHLFGFIFGFLLSLATF 880
>gi|167517132|ref|XP_001742907.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779531|gb|EDQ93145.1| predicted protein [Monosiga brevicollis MX1]
Length = 323
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 69 SISTLRDL---GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
++ LRD GG N +Q +R+L+++++HAG IHL+V + + V LE++ G
Sbjct: 101 EVNCLRDSCGPGGSAEN----PDQGWRILTALFMHAGAIHLLVMLYVQLSVGVPLERKAG 156
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
+ RIA +YL+SG GG+L+S L + VGASGA++GL+ T L +L+ W + +
Sbjct: 157 WLRIALIYLISGCGGNLVSALFVPNSAQ---VGASGAVYGLVATALVDLMHCWRLLKSPW 213
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHI 216
L A+ L G P +D N AH+
Sbjct: 214 VQLGTYLIQTAVLLLLGTTPWLD---NFAHV 241
>gi|418606637|ref|ZP_13169907.1| peptidase, S54 family [Staphylococcus epidermidis VCU057]
gi|374407413|gb|EHQ78275.1| peptidase, S54 family [Staphylococcus epidermidis VCU057]
Length = 477
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 T---ISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|336391270|ref|ZP_08572669.1| membrane-associated serine protease [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 209
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 21/155 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N+++++ Q +RL+ ++LH+G++H+ VN +L + ++E FG R +YLLSG
Sbjct: 31 GAKVNILIQQGQWWRLIMPIFLHSGLMHIAVNSVTLYFIGMQIESLFGHWRFTLIYLLSG 90
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGT--MLSELIANWTIYANKCTSLSVLGS-- 193
G++ S + + G +SVGAS ALFGL G ML E + T++ +G
Sbjct: 91 IVGNIASFVFNTG----ISVGASTALFGLFGAFFMLVEAF-------RQNTAIRAMGQQF 139
Query: 194 --VIALNLAFG-FIPGVDGVDNLAHIGGFASGVLL 225
I LNLAF F PG+D H+GG G L+
Sbjct: 140 ALFIVLNLAFDLFNPGIDLA---GHVGGLLGGFLV 171
>gi|229818522|ref|YP_002880048.1| rhomboid family protein [Beutenbergia cavernae DSM 12333]
gi|229564435|gb|ACQ78286.1| Rhomboid family protein [Beutenbergia cavernae DSM 12333]
Length = 315
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS---LLSC 145
Q YR LS+ +LH G++HL NM +L +V LEQ G R A L+LLS GGS LL
Sbjct: 147 QPYRFLSAAFLHGGLLHLAFNMYALWIVGGFLEQMLGRWRYAALFLLSAIGGSVGYLLLA 206
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
I VGASGA+FGL ++ L + + + VL IA+N+ GF+
Sbjct: 207 DPLSRAWTIPVVGASGAVFGLFAAIVFVLRST----GRNASQILVL---IAINVVIGFV- 258
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRP 233
V G+ AH+GG +G LL P
Sbjct: 259 -VPGIAWQAHLGGMVTGALLAVAFVYAP 285
>gi|27468153|ref|NP_764790.1| hypothetical protein SE1235 [Staphylococcus epidermidis ATCC 12228]
gi|57867074|ref|YP_188690.1| rhomboid family protein [Staphylococcus epidermidis RP62A]
gi|251810965|ref|ZP_04825438.1| S54 family peptidase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876025|ref|ZP_06284892.1| peptidase, S54 (rhomboid) family protein [Staphylococcus
epidermidis SK135]
gi|293366490|ref|ZP_06613167.1| rhomboid family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646984|ref|ZP_12296833.1| peptidase, S54 family [Staphylococcus epidermidis VCU144]
gi|417656060|ref|ZP_12305751.1| peptidase, S54 family [Staphylococcus epidermidis VCU028]
gi|417659640|ref|ZP_12309240.1| peptidase, S54 family [Staphylococcus epidermidis VCU045]
gi|417908746|ref|ZP_12552503.1| peptidase, S54 family [Staphylococcus epidermidis VCU037]
gi|417912278|ref|ZP_12555973.1| peptidase, S54 family [Staphylococcus epidermidis VCU105]
gi|417913747|ref|ZP_12557410.1| peptidase, S54 family [Staphylococcus epidermidis VCU109]
gi|418609437|ref|ZP_13172589.1| peptidase, S54 family [Staphylococcus epidermidis VCU065]
gi|418612797|ref|ZP_13175821.1| peptidase, S54 family [Staphylococcus epidermidis VCU117]
gi|418616300|ref|ZP_13179225.1| peptidase, S54 family [Staphylococcus epidermidis VCU120]
gi|418625262|ref|ZP_13187915.1| peptidase, S54 family [Staphylococcus epidermidis VCU125]
gi|418626366|ref|ZP_13188978.1| peptidase, S54 family [Staphylococcus epidermidis VCU126]
gi|418629382|ref|ZP_13191890.1| peptidase, S54 family [Staphylococcus epidermidis VCU127]
gi|418665219|ref|ZP_13226669.1| peptidase, S54 family [Staphylococcus epidermidis VCU081]
gi|419771673|ref|ZP_14297719.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-K]
gi|420165544|ref|ZP_14672235.1| rhomboid family protein [Staphylococcus epidermidis NIHLM088]
gi|420170258|ref|ZP_14676819.1| rhomboid family protein [Staphylococcus epidermidis NIHLM070]
gi|420183211|ref|ZP_14689344.1| rhomboid family protein [Staphylococcus epidermidis NIHLM049]
gi|420194847|ref|ZP_14700644.1| rhomboid family protein [Staphylococcus epidermidis NIHLM021]
gi|420197429|ref|ZP_14703153.1| rhomboid family protein [Staphylococcus epidermidis NIHLM020]
gi|420201679|ref|ZP_14707289.1| rhomboid family protein [Staphylococcus epidermidis NIHLM018]
gi|420206132|ref|ZP_14711642.1| rhomboid family protein [Staphylococcus epidermidis NIHLM008]
gi|420209055|ref|ZP_14714493.1| rhomboid family protein [Staphylococcus epidermidis NIHLM003]
gi|420214009|ref|ZP_14719289.1| rhomboid family protein [Staphylococcus epidermidis NIH05005]
gi|420221664|ref|ZP_14726591.1| peptidase, S54 family [Staphylococcus epidermidis NIH08001]
gi|420225746|ref|ZP_14730573.1| peptidase, S54 family [Staphylococcus epidermidis NIH06004]
gi|420227336|ref|ZP_14732107.1| peptidase, S54 family [Staphylococcus epidermidis NIH05003]
gi|420229653|ref|ZP_14734358.1| peptidase, S54 family [Staphylococcus epidermidis NIH04003]
gi|420234711|ref|ZP_14739271.1| peptidase, S54 family [Staphylococcus epidermidis NIH051475]
gi|421606956|ref|ZP_16048207.1| rhomboid family protein [Staphylococcus epidermidis AU12-03]
gi|27315699|gb|AAO04834.1|AE016748_68 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637732|gb|AAW54520.1| rhomboid family protein [Staphylococcus epidermidis RP62A]
gi|251805475|gb|EES58132.1| S54 family peptidase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295050|gb|EFA87577.1| peptidase, S54 (rhomboid) family protein [Staphylococcus
epidermidis SK135]
gi|291319259|gb|EFE59628.1| rhomboid family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329725333|gb|EGG61816.1| peptidase, S54 family [Staphylococcus epidermidis VCU144]
gi|329735277|gb|EGG71569.1| peptidase, S54 family [Staphylococcus epidermidis VCU045]
gi|329737310|gb|EGG73564.1| peptidase, S54 family [Staphylococcus epidermidis VCU028]
gi|341651289|gb|EGS75094.1| peptidase, S54 family [Staphylococcus epidermidis VCU105]
gi|341654769|gb|EGS78507.1| peptidase, S54 family [Staphylococcus epidermidis VCU109]
gi|341656107|gb|EGS79830.1| peptidase, S54 family [Staphylococcus epidermidis VCU037]
gi|374407651|gb|EHQ78503.1| peptidase, S54 family [Staphylococcus epidermidis VCU065]
gi|374409194|gb|EHQ79994.1| peptidase, S54 family [Staphylococcus epidermidis VCU081]
gi|374817874|gb|EHR82049.1| peptidase, S54 family [Staphylococcus epidermidis VCU117]
gi|374821126|gb|EHR85193.1| peptidase, S54 family [Staphylococcus epidermidis VCU120]
gi|374825404|gb|EHR89340.1| peptidase, S54 family [Staphylococcus epidermidis VCU125]
gi|374832800|gb|EHR96505.1| peptidase, S54 family [Staphylococcus epidermidis VCU126]
gi|374834085|gb|EHR97745.1| peptidase, S54 family [Staphylococcus epidermidis VCU127]
gi|383360492|gb|EID37887.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-K]
gi|394235345|gb|EJD80917.1| rhomboid family protein [Staphylococcus epidermidis NIHLM088]
gi|394240596|gb|EJD86019.1| rhomboid family protein [Staphylococcus epidermidis NIHLM070]
gi|394249674|gb|EJD94887.1| rhomboid family protein [Staphylococcus epidermidis NIHLM049]
gi|394263907|gb|EJE08628.1| rhomboid family protein [Staphylococcus epidermidis NIHLM021]
gi|394266236|gb|EJE10882.1| rhomboid family protein [Staphylococcus epidermidis NIHLM020]
gi|394271947|gb|EJE16426.1| rhomboid family protein [Staphylococcus epidermidis NIHLM018]
gi|394277971|gb|EJE22288.1| rhomboid family protein [Staphylococcus epidermidis NIHLM008]
gi|394279283|gb|EJE23591.1| rhomboid family protein [Staphylococcus epidermidis NIHLM003]
gi|394283931|gb|EJE28092.1| rhomboid family protein [Staphylococcus epidermidis NIH05005]
gi|394290290|gb|EJE34154.1| peptidase, S54 family [Staphylococcus epidermidis NIH08001]
gi|394293180|gb|EJE36903.1| peptidase, S54 family [Staphylococcus epidermidis NIH06004]
gi|394297267|gb|EJE40870.1| peptidase, S54 family [Staphylococcus epidermidis NIH05003]
gi|394298947|gb|EJE42502.1| peptidase, S54 family [Staphylococcus epidermidis NIH04003]
gi|394303954|gb|EJE47364.1| peptidase, S54 family [Staphylococcus epidermidis NIH051475]
gi|406657425|gb|EKC83813.1| rhomboid family protein [Staphylococcus epidermidis AU12-03]
Length = 486
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|82751152|ref|YP_416893.1| hypothetical protein SAB1421c [Staphylococcus aureus RF122]
gi|82656683|emb|CAI81110.1| probable membrane protein [Staphylococcus aureus RF122]
Length = 487
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|420184523|ref|ZP_14690632.1| rhomboid family protein [Staphylococcus epidermidis NIHLM040]
gi|394257174|gb|EJE02096.1| rhomboid family protein [Staphylococcus epidermidis NIHLM040]
Length = 486
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALFVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|448238728|ref|YP_007402786.1| rhomboid family protein [Geobacillus sp. GHH01]
gi|445207570|gb|AGE23035.1| rhomboid family protein [Geobacillus sp. GHH01]
Length = 389
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +RLL+ M+LH G +HL+ N +L + +E+ +G R +Y+ +G
Sbjct: 215 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSFRFLFIYVTAG 274
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + ++V+ S+
Sbjct: 275 FFGALASFLFTPS----LSAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVI-SL 325
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
I +NL FG + V G+DN HIGG G L
Sbjct: 326 IIVNLLFGLL--VPGIDNAGHIGGLVGGFL 353
>gi|261417690|ref|YP_003251372.1| rhomboid family protein [Geobacillus sp. Y412MC61]
gi|319767503|ref|YP_004133004.1| rhomboid family protein [Geobacillus sp. Y412MC52]
gi|261374147|gb|ACX76890.1| Rhomboid family protein [Geobacillus sp. Y412MC61]
gi|317112369|gb|ADU94861.1| Rhomboid family protein [Geobacillus sp. Y412MC52]
Length = 386
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +RLL+ M+LH G +HL+ N +L + +E+ +G R +Y+ +G
Sbjct: 212 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 271
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + ++V+ S+
Sbjct: 272 FFGALASFLFTPS----LSAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVI-SL 322
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
I +NL FG + V G+DN HIGG G L
Sbjct: 323 IIVNLLFGLL--VPGIDNAGHIGGLVGGFL 350
>gi|346327128|gb|EGX96724.1| rhomboid family membrane protein [Cordyceps militaris CM01]
Length = 601
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 20/199 (10%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T ++ C L + G G + D G D++ +Q YR +
Sbjct: 327 CPNATTNTEICPLSTLCG------------FGGVPDPVFD-GNADQH--PAPDQWYRFII 371
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
+++HAGIIH+ N+ + V+ +EQ G R +Y+ +G G ++ + I
Sbjct: 372 PIFMHAGIIHIGFNLLLQLTVAKEMEQAIGSVRFFLVYMSAGIFGFVMG--GNFAAPGIA 429
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG+LFG++ L +L+ +W+ + L + + + G +P G+DN +H
Sbjct: 430 STGASGSLFGIIALTLLDLLYSWSERRSPVKDLMFIILDMVIAFVLGLLP---GLDNFSH 486
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF G+ LG + P
Sbjct: 487 IGGFLMGLALGICVLHSPN 505
>gi|295107889|emb|CBL21842.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Ruminococcus obeum A2-162]
Length = 200
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 9/168 (5%)
Query: 67 GPSISTLR--DLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
G S +T+ D G +I+ + YRL + M+LH GI HL+ NM L ++ RLE+
Sbjct: 31 GSSQNTIHMLDCGAAYTPMIIEGGEYYRLFTCMFLHFGIEHLLNNMLVLFVLGSRLERVI 90
Query: 125 GFARIAPLYLLSGFGGSLLSCL-HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G + +YL+ G G+++S L K VS GASGA+F ++G M+ ++ N +
Sbjct: 91 GKIKFLIIYLVGGLLGNVISVLVELKSMDFAVSAGASGAVFAVMGAMIYIVVRNKG-WLG 149
Query: 184 KCTSLSVLGSVIA-LNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
++ +L V+A +L +GF GVDN AH+ G G+++ +L+
Sbjct: 150 DLSARQIL--VMAFFSLYYGFTS--TGVDNTAHVAGLVCGMMISILLY 193
>gi|340619903|ref|YP_004738356.1| serine endopeptidase [Zobellia galactanivorans]
gi|339734700|emb|CAZ98077.1| Serine endopeptidase, family S54 [Zobellia galactanivorans]
Length = 512
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
++ P+ L ++GG +R V + RLL+S ++H G++HLV+N+ L L L+
Sbjct: 342 IISPTPQELLEIGG-NRRAEVMTGEFSRLLTSTFIHGGLLHLVMNLVGLGLGGMLLDSIL 400
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G + Y+L G S+ S L + + VSVGASGA+FGL G +L+ I +
Sbjct: 401 GRFQFILSYILCGIVASIASILWY---ENTVSVGASGAIFGLYGIILAFTIFKIFPRYMR 457
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
T+ +LG +L FGF G+DN AH GG SG ++G IL
Sbjct: 458 STTWILLGLYAGGSLLFGFF---GGIDNAAHFGGLISGFVIGGIL 499
>gi|384250948|gb|EIE24426.1| U-box-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 578
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Query: 55 YSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLM 114
+ + +N L+GPS + LR LG L + IV + Q +RL++S++L +GII LV+ + +L
Sbjct: 288 WQIEALAQNPLVGPSEAALRALGSLSTSDIVDRRQYWRLITSIFLCSGIIELVLAVMTLW 347
Query: 115 LVSYRLEQEFGFA--RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS 172
+ + F+ +A LY+L G G+L+S ++ SVGA A+ GL+G L+
Sbjct: 348 AFGVHVSRALRFSAVSVAALYILPGIVGALVSV---NLSTDVPSVGAPAAVCGLIGAALA 404
Query: 173 ELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ I Y N +L +L IA G +P
Sbjct: 405 DQIVGSKAYRNHACTLIMLAVAIAQFTITGLLP 437
>gi|418325502|ref|ZP_12936708.1| peptidase, S54 family [Staphylococcus epidermidis VCU071]
gi|365228104|gb|EHM69289.1| peptidase, S54 family [Staphylococcus epidermidis VCU071]
Length = 486
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALFVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|420163079|ref|ZP_14669826.1| rhomboid family protein [Staphylococcus epidermidis NIHLM095]
gi|420167946|ref|ZP_14674598.1| rhomboid family protein [Staphylococcus epidermidis NIHLM087]
gi|394234768|gb|EJD80342.1| rhomboid family protein [Staphylococcus epidermidis NIHLM095]
gi|394237974|gb|EJD83460.1| rhomboid family protein [Staphylococcus epidermidis NIHLM087]
Length = 486
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 ---TISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|239617958|ref|YP_002941280.1| Rhomboid family protein [Kosmotoga olearia TBF 19.5.1]
gi|239506789|gb|ACR80276.1| Rhomboid family protein [Kosmotoga olearia TBF 19.5.1]
Length = 285
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 14/180 (7%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
GG+ R ++R Y L++++LH ++H++ NM +L + Y +E +G + Y +S
Sbjct: 44 GGISRGALLR-GLFYTPLTALFLHGNMLHILFNMYALFQLGYLVEGIYGMRKFLIFYFVS 102
Query: 137 GFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS-ELIANWTIYANKCTSLSVLGSVI 195
G G+L + +++G+S A+FGL+G + + + + T LS+L +I
Sbjct: 103 GIIGNLTAA----TMTPYITIGSSSAIFGLVGVLFALGFKKDTPVVLKSVTGLSLL-PII 157
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPK 255
LNL FG + + + N AH+GG +G LLG+ F+ PQY V + ++ K + P+
Sbjct: 158 LLNLMFGLM--IPNISNSAHVGGLIAGSLLGW--FVLPQYAIVRKPRVS---RVKQKSPE 210
>gi|340522831|gb|EGR53064.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T ++ C L ++ G G + + G D N NQ +R +
Sbjct: 240 CPNATKNTQFCPLSELCG------------FGGDVPNPKFDG--DANQTPIPNQWFRFII 285
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
+++HAG+IH+ N+ + + +E G R +Y+ +G G ++ + I
Sbjct: 286 PIFMHAGLIHIGFNLLMQLTIGKEMEIAIGSIRFFLVYMSAGIFGFVMG--GNYAAPGIA 343
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG+LFG++ L +L+ +W + L + + ++ G +P G+DN +H
Sbjct: 344 STGASGSLFGIIALTLLDLLYSWKDRRSPVKDLLFIIIDMVISFVLGLLP---GLDNFSH 400
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF G++LG + P
Sbjct: 401 IGGFLMGLVLGICVLHSPN 419
>gi|307171848|gb|EFN63503.1| Rhomboid family member 1 [Camponotus floridanus]
Length = 925
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 6/154 (3%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL ++++LHAGI+HLV+ + + LE+ G RIA +Y + G+L S +
Sbjct: 717 DQFYRLFTTIFLHAGIVHLVITLLIQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIF 776
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +GA F LL T++ E++ W + + +LS L ++ L G +P
Sbjct: 777 VPYRAE---VGPAGAHFALLATLVVEVLHCWPMLKHPRRALSKLILILVGLLMLGILP-- 831
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
VDN AH+ GF G L + L +G+ +
Sbjct: 832 -WVDNYAHLFGFIFGFLAAYALMPFISFGHYDRR 864
>gi|422746158|ref|ZP_16800091.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320140566|gb|EFW32420.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 487
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|254572129|ref|XP_002493174.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032972|emb|CAY70995.1| Hypothetical protein PAS_chr3_0934 [Komagataella pastoris GS115]
gi|328352810|emb|CCA39208.1| Rhomboid family member 1 [Komagataella pastoris CBS 7435]
Length = 562
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 13/160 (8%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q +R+++ M+LHAG IH++ N+ M ++Y +E+ G R +YL SG G +L
Sbjct: 264 DQWWRMITPMFLHAGFIHIIFNLLLQMTLAYNIERVIGPIRYGTIYLASGVAGFVLGS-- 321
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTI----------YANKCTSLSVLGSVIAL 197
+ + S GASGAL G++ + LI + + + ++ S++ L
Sbjct: 322 NFSPVGVSSTGASGALLGVMAVNILLLITTKSTAHFGGVKGKQVPVRNFKVILIVSIVEL 381
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
+ F F+ + G+DN AHIGGFA G+LLG L P + Y
Sbjct: 382 VIIF-FLGLLPGLDNFAHIGGFAMGLLLGLTLIDDPFFVY 420
>gi|160874113|ref|YP_001553429.1| rhomboid family protein [Shewanella baltica OS195]
gi|378707356|ref|YP_005272250.1| rhomboid family protein [Shewanella baltica OS678]
gi|418024255|ref|ZP_12663238.1| Peptidase S54, rhomboid domain protein [Shewanella baltica OS625]
gi|160859635|gb|ABX48169.1| Rhomboid family protein [Shewanella baltica OS195]
gi|315266345|gb|ADT93198.1| Rhomboid family protein [Shewanella baltica OS678]
gi|353536215|gb|EHC05774.1| Peptidase S54, rhomboid domain protein [Shewanella baltica OS625]
Length = 541
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 90/175 (51%), Gaps = 21/175 (12%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+RL++S ++H G+ HL +N+ L V LE G R+ YL++G S+ S +
Sbjct: 376 WRLITSTFIHGGLAHLALNLYGLFFVGSFLEPVLGKWRLFLAYLITGILASIASICWYDA 435
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAF----GFIPG 206
VSVGASGA+ GLLG ++ I+A K + ++++NLAF + G
Sbjct: 436 ---TVSVGASGAIMGLLGILV--------IWAWKKIFPEDINWILSINLAFFVTISLVAG 484
Query: 207 -VDGVDNLAHIGGFASGVLLGFILFLRPQ-----YGYVSEKYIAAGYDAKHRQPK 255
+ GVDN AH+GG SG+++G++ Q G + I AK R+P+
Sbjct: 485 LLGGVDNAAHVGGLLSGLVVGYLSLRYAQRAQGDRGAQRARKIEGHSPAKKRKPR 539
>gi|386729250|ref|YP_006195633.1| integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus 71193]
gi|387602889|ref|YP_005734410.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478900|ref|YP_006710330.1| hypothetical protein C248_1592 [Staphylococcus aureus 08BA02176]
gi|418309989|ref|ZP_12921539.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21331]
gi|418978272|ref|ZP_13526073.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus DR10]
gi|283470827|emb|CAQ50038.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237446|gb|EHM78292.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21331]
gi|379993888|gb|EIA15333.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus DR10]
gi|384230543|gb|AFH69790.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus 71193]
gi|404440389|gb|AFR73582.1| putative membrane protein [Staphylococcus aureus 08BA02176]
Length = 487
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|167526511|ref|XP_001747589.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774035|gb|EDQ87669.1| predicted protein [Monosiga brevicollis MX1]
Length = 883
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
G SI +D RNL +Q +R ++ ++ HA + H ++ + + ++E G
Sbjct: 666 GTSIDARKDF----RNLPDNPSQWWRFITPLFFHASVAHAILVLIAQYYYGRKMETHIGA 721
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R +Y +SG GG+ ++ + VSVG + +++G+L L +L +W +
Sbjct: 722 MRSLLIYFISGIGGTCIAAVFSPLD---VSVGTNPSVYGILAVHLVDLFQSWQLVDRPGL 778
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
SL+ LG VIA+ L G VDN +HIGGFA G++ G I
Sbjct: 779 SLAGLGGVIAVLLLVG---TTSYVDNWSHIGGFAFGLVSGIIF 818
>gi|258443587|ref|ZP_05691926.1| rhomboid family protein [Staphylococcus aureus A8115]
gi|282893050|ref|ZP_06301284.1| peptidase [Staphylococcus aureus A8117]
gi|443635576|ref|ZP_21119704.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21236]
gi|257850993|gb|EEV74936.1| rhomboid family protein [Staphylococcus aureus A8115]
gi|282764368|gb|EFC04494.1| peptidase [Staphylococcus aureus A8117]
gi|443409217|gb|ELS67715.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21236]
Length = 487
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|83745575|ref|ZP_00942633.1| transmembrane hypothetical [Ralstonia solanacearum UW551]
gi|83727652|gb|EAP74772.1| transmembrane hypothetical [Ralstonia solanacearum UW551]
Length = 569
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
N L P IS L LGG + V+ + +RLLS+ +LHAG++HL +NM L +E+
Sbjct: 228 NPLQTP-ISVLFSLGG-NAAFEVQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVER 285
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
+G A +YL +G GS LS + + VGASGA+FG+ G L + +
Sbjct: 286 IYGPAAYLLIYLGAGLLGSALSLSF--AAQHAIGVGASGAVFGVAGAWLVAIGRYRGLMP 343
Query: 183 NKCTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ L+ LG + +LA G GVDN AHIGG G +L IL R
Sbjct: 344 QTLSKRLLTQLGLFVLYSLAQGLTK--PGVDNAAHIGGLVGGCMLAMILPAR 393
>gi|393912104|gb|EFO22618.2| rhomboid family protein [Loa loa]
Length = 1003
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQK---YRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
EN L +S L ++ G+ +RKNQ YRL ++LHAGIIH ++ + ML
Sbjct: 768 ENATLCSQVSCLSEICGM--LPFLRKNQPDQWYRLFIPLFLHAGIIHCILTVFIQMLYMR 825
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
LE+ G+AR+A LY++ G GG L + K E VG +G+ G+ M +++ +W
Sbjct: 826 DLEKLLGWARVALLYMVPGIGGYLAGAIFVPYKPE---VGPAGSHVGMFAAMYVDVVYSW 882
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
+ ++ L A G +P VDN AH GF G+L+ +
Sbjct: 883 NLLERPWHAIMQLSLFTVAVFAVGTLP---WVDNWAHFFGFIFGILVSLAVL 931
>gi|418430534|ref|ZP_13003445.1| hypothetical protein MQE_01426 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387718274|gb|EIK06258.1| hypothetical protein MQE_01426 [Staphylococcus aureus subsp. aureus
VRS3a]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|312077777|ref|XP_003141452.1| rhomboid family protein [Loa loa]
Length = 989
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQK---YRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
EN L +S L ++ G+ +RKNQ YRL ++LHAGIIH ++ + ML
Sbjct: 754 ENATLCSQVSCLSEICGM--LPFLRKNQPDQWYRLFIPLFLHAGIIHCILTVFIQMLYMR 811
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
LE+ G+AR+A LY++ G GG L + K E VG +G+ G+ M +++ +W
Sbjct: 812 DLEKLLGWARVALLYMVPGIGGYLAGAIFVPYKPE---VGPAGSHVGMFAAMYVDVVYSW 868
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ ++ L A G +P VDN AH GF G+L+ +
Sbjct: 869 NLLERPWHAIMQLSLFTVAVFAVGTLP---WVDNWAHFFGFIFGILVSLAV 916
>gi|253733201|ref|ZP_04867366.1| S54 family peptidase [Staphylococcus aureus subsp. aureus TCH130]
gi|417897863|ref|ZP_12541789.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21259]
gi|253728741|gb|EES97470.1| S54 family peptidase [Staphylococcus aureus subsp. aureus TCH130]
gi|341849365|gb|EGS90508.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21259]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|221140031|ref|ZP_03564524.1| peptidase [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|384862151|ref|YP_005744871.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|302751380|gb|ADL65557.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|148268033|ref|YP_001246976.1| rhomboid family protein [Staphylococcus aureus subsp. aureus JH9]
gi|150394101|ref|YP_001316776.1| rhomboid family protein [Staphylococcus aureus subsp. aureus JH1]
gi|257793625|ref|ZP_05642604.1| rhomboid family protein [Staphylococcus aureus A9781]
gi|258411075|ref|ZP_05681355.1| rhomboid family protein [Staphylococcus aureus A9763]
gi|258420121|ref|ZP_05683076.1| rhomboid family protein [Staphylococcus aureus A9719]
gi|258446794|ref|ZP_05694948.1| rhomboid family protein [Staphylococcus aureus A6300]
gi|258448708|ref|ZP_05696820.1| rhomboid family protein [Staphylococcus aureus A6224]
gi|258453525|ref|ZP_05701503.1| rhomboid family protein [Staphylococcus aureus A5937]
gi|282928182|ref|ZP_06335787.1| rhomboid family protein [Staphylococcus aureus A10102]
gi|295406672|ref|ZP_06816477.1| rhomboid family protein [Staphylococcus aureus A8819]
gi|297245746|ref|ZP_06929611.1| rhomboid family protein [Staphylococcus aureus A8796]
gi|384864770|ref|YP_005750129.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|387150692|ref|YP_005742256.1| Putative membrane peptidase, contains TPR repeat domain
[Staphylococcus aureus 04-02981]
gi|415692667|ref|ZP_11454587.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus CGS03]
gi|417651337|ref|ZP_12301100.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21172]
gi|418424698|ref|ZP_12997812.1| hypothetical protein MQA_00546 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418427692|ref|ZP_13000697.1| hypothetical protein MQC_00501 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418433677|ref|ZP_13006269.1| hypothetical protein MQG_01236 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418437172|ref|ZP_13008968.1| hypothetical protein MQI_01256 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418440072|ref|ZP_13011773.1| hypothetical protein MQK_01111 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418443090|ref|ZP_13014689.1| hypothetical protein MQM_01203 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418446152|ref|ZP_13017626.1| hypothetical protein MQO_01783 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418449166|ref|ZP_13020552.1| hypothetical protein MQQ_01563 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418451979|ref|ZP_13023313.1| hypothetical protein MQS_00457 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454973|ref|ZP_13026232.1| hypothetical protein MQU_01088 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457851|ref|ZP_13029050.1| hypothetical protein MQW_01368 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418640342|ref|ZP_13202574.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-3]
gi|418878467|ref|ZP_13432702.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881233|ref|ZP_13435450.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884081|ref|ZP_13438274.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418895312|ref|ZP_13449407.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418991477|ref|ZP_13539138.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|419784633|ref|ZP_14310396.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-M]
gi|147741102|gb|ABQ49400.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946553|gb|ABR52489.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus JH1]
gi|257787597|gb|EEV25937.1| rhomboid family protein [Staphylococcus aureus A9781]
gi|257840225|gb|EEV64689.1| rhomboid family protein [Staphylococcus aureus A9763]
gi|257843832|gb|EEV68226.1| rhomboid family protein [Staphylococcus aureus A9719]
gi|257854369|gb|EEV77318.1| rhomboid family protein [Staphylococcus aureus A6300]
gi|257857986|gb|EEV80875.1| rhomboid family protein [Staphylococcus aureus A6224]
gi|257864256|gb|EEV87006.1| rhomboid family protein [Staphylococcus aureus A5937]
gi|282589989|gb|EFB95071.1| rhomboid family protein [Staphylococcus aureus A10102]
gi|285817231|gb|ADC37718.1| Putative membrane peptidase, contains TPR repeat domain
[Staphylococcus aureus 04-02981]
gi|294968419|gb|EFG44443.1| rhomboid family protein [Staphylococcus aureus A8819]
gi|297177397|gb|EFH36649.1| rhomboid family protein [Staphylococcus aureus A8796]
gi|312829937|emb|CBX34779.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129827|gb|EFT85817.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus CGS03]
gi|329727521|gb|EGG63977.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21172]
gi|375014906|gb|EHS08577.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-3]
gi|377694589|gb|EHT18954.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695118|gb|EHT19482.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377714416|gb|EHT38617.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377723599|gb|EHT47724.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377730976|gb|EHT55034.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|383363843|gb|EID41169.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-M]
gi|387717980|gb|EIK05975.1| hypothetical protein MQC_00501 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387719477|gb|EIK07422.1| hypothetical protein MQA_00546 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387724901|gb|EIK12532.1| hypothetical protein MQG_01236 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387727160|gb|EIK14692.1| hypothetical protein MQI_01256 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387730222|gb|EIK17629.1| hypothetical protein MQK_01111 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387735290|gb|EIK22419.1| hypothetical protein MQO_01783 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387736766|gb|EIK23854.1| hypothetical protein MQM_01203 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387736929|gb|EIK24015.1| hypothetical protein MQQ_01563 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387744860|gb|EIK31624.1| hypothetical protein MQS_00457 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745026|gb|EIK31788.1| hypothetical protein MQU_01088 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746619|gb|EIK33348.1| hypothetical protein MQW_01368 [Staphylococcus aureus subsp. aureus
VRS11b]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|260222883|emb|CBA32895.1| hypothetical protein Csp_B16320 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 364
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ Q +RLLS+M++H G+ HL VNM +L + LE G R A LYL +G G+LLS
Sbjct: 67 TQDGQWWRLLSAMFIHFGVWHLAVNMWALWDIGRLLETLLGRWRFAALYLGAGVCGNLLS 126
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSEL-IANWTIYANKCTSL--SVLG-SVIALNLA 200
+ + VS GASGA+FGL G +L L + + A + L LG SV+ L L
Sbjct: 127 LVVQGNRA--VSGGASGAVFGLYGALLVFLWVERKQVEAGEFRWLFGGALGFSVLMLALG 184
Query: 201 FGFIPGVDGVDNLAHIGGFASGVL-LGFIL 229
+ F+P G+DN AH GG +G+L GF+L
Sbjct: 185 W-FMP---GIDNAAHGGGLVAGMLWAGFLL 210
>gi|196248915|ref|ZP_03147615.1| Rhomboid family protein [Geobacillus sp. G11MC16]
gi|196211791|gb|EDY06550.1| Rhomboid family protein [Geobacillus sp. G11MC16]
Length = 390
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 14/150 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +R L+ M+LH G +HL+ N +L + +E+ +G R +Y +G
Sbjct: 216 GAKFNPLIEMGEWWRFLTPMFLHIGFLHLLTNTFALYYLGITVERLYGSLRFLLIYATAG 275
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + ++V+ S+
Sbjct: 276 FFGTLASFLFTPS----ISAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVI-SL 326
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
I +NL FG + V G+DN HIGG G L
Sbjct: 327 IVVNLLFGLL--VPGIDNAGHIGGLVGGFL 354
>gi|386831159|ref|YP_006237813.1| hypothetical protein SAEMRSA15_14690 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417798923|ref|ZP_12446077.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21310]
gi|418654972|ref|ZP_13216857.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-105]
gi|334275085|gb|EGL93386.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21310]
gi|375038535|gb|EHS31510.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-105]
gi|385196551|emb|CCG16180.1| putative membrane protein [Staphylococcus aureus subsp. aureus HO
5096 0412]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|384550376|ref|YP_005739628.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302333225|gb|ADL23418.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|258423202|ref|ZP_05686095.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|417889989|ref|ZP_12534068.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21200]
gi|418284049|ref|ZP_12896781.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21202]
gi|418558986|ref|ZP_13123533.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21252]
gi|418889364|ref|ZP_13443497.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1524]
gi|257846652|gb|EEV70673.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|341855682|gb|EGS96526.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21200]
gi|365164913|gb|EHM56743.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21202]
gi|371976336|gb|EHO93626.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21252]
gi|377752872|gb|EHT76790.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1524]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|387780641|ref|YP_005755439.1| hypothetical protein SARLGA251_14550 [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177743|emb|CCC88222.1| putative membrane protein [Staphylococcus aureus subsp. aureus
LGA251]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTTT---ISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|21283230|ref|NP_646318.1| hypothetical protein MW1501 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486385|ref|YP_043606.1| hypothetical protein SAS1487 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253732202|ref|ZP_04866367.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|297207732|ref|ZP_06924167.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911813|ref|ZP_07129256.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|418934519|ref|ZP_13488341.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418988616|ref|ZP_13536288.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|448740624|ref|ZP_21722600.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/314250]
gi|21204670|dbj|BAB95366.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244828|emb|CAG43288.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253723991|gb|EES92720.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|296887749|gb|EFH26647.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886059|gb|EFK81261.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|377717709|gb|EHT41884.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377770613|gb|EHT94374.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|445548591|gb|ELY16841.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/314250]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|15924539|ref|NP_372073.1| hypothetical protein SAV1549 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927129|ref|NP_374662.1| hypothetical protein SA1379 [Staphylococcus aureus subsp. aureus
N315]
gi|57651942|ref|YP_186446.1| rhomboid family protein [Staphylococcus aureus subsp. aureus COL]
gi|87160848|ref|YP_494204.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|151221664|ref|YP_001332486.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979867|ref|YP_001442126.1| hypothetical protein SAHV_1536 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509778|ref|YP_001575437.1| peptidase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253314920|ref|ZP_04838133.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006335|ref|ZP_05144936.2| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425674|ref|ZP_05602098.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428335|ref|ZP_05604733.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430972|ref|ZP_05607352.1| peptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433660|ref|ZP_05610018.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436574|ref|ZP_05612618.1| peptidase [Staphylococcus aureus subsp. aureus M876]
gi|258437381|ref|ZP_05689365.1| peptidase [Staphylococcus aureus A9299]
gi|258450622|ref|ZP_05698684.1| peptidase [Staphylococcus aureus A5948]
gi|262049127|ref|ZP_06022004.1| hypothetical protein SAD30_0284 [Staphylococcus aureus D30]
gi|262051211|ref|ZP_06023435.1| hypothetical protein SA930_1642 [Staphylococcus aureus 930918-3]
gi|269203177|ref|YP_003282446.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ED98]
gi|282911187|ref|ZP_06318989.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914356|ref|ZP_06322142.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M899]
gi|282916819|ref|ZP_06324577.1| peptidase [Staphylococcus aureus subsp. aureus D139]
gi|282919325|ref|ZP_06327060.1| peptidase [Staphylococcus aureus subsp. aureus C427]
gi|282920098|ref|ZP_06327823.1| peptidase [Staphylococcus aureus A9765]
gi|282924650|ref|ZP_06332318.1| peptidase [Staphylococcus aureus subsp. aureus C101]
gi|283770625|ref|ZP_06343517.1| peptidase [Staphylococcus aureus subsp. aureus H19]
gi|284024608|ref|ZP_06379006.1| rhomboid family protein [Staphylococcus aureus subsp. aureus 132]
gi|293503430|ref|ZP_06667277.1| peptidase [Staphylococcus aureus subsp. aureus 58-424]
gi|293510447|ref|ZP_06669153.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M809]
gi|293530987|ref|ZP_06671669.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M1015]
gi|294848580|ref|ZP_06789326.1| peptidase [Staphylococcus aureus A9754]
gi|304380862|ref|ZP_07363522.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|384547782|ref|YP_005737035.1| membrane protein [Staphylococcus aureus subsp. aureus ED133]
gi|384870090|ref|YP_005752804.1| Peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781834|ref|YP_005758005.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|387143156|ref|YP_005731549.1| hypothetical protein SATW20_15450 [Staphylococcus aureus subsp.
aureus TW20]
gi|415686263|ref|ZP_11450400.1| S54 family peptidase [Staphylococcus aureus subsp. aureus CGS01]
gi|416840018|ref|ZP_11903337.1| rhomboid family peptidase [Staphylococcus aureus O11]
gi|416845827|ref|ZP_11906228.1| rhomboid family peptidase [Staphylococcus aureus O46]
gi|417654442|ref|ZP_12304161.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21193]
gi|417797331|ref|ZP_12444527.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21305]
gi|417892437|ref|ZP_12536486.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21201]
gi|417905331|ref|ZP_12549142.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21269]
gi|418277349|ref|ZP_12891936.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21178]
gi|418285050|ref|ZP_12897750.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21209]
gi|418316423|ref|ZP_12927861.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21340]
gi|418319401|ref|ZP_12930781.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21232]
gi|418321319|ref|ZP_12932665.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus VCU006]
gi|418569512|ref|ZP_13133838.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21283]
gi|418574454|ref|ZP_13138623.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21333]
gi|418579474|ref|ZP_13143569.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418599967|ref|ZP_13163441.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21343]
gi|418641900|ref|ZP_13204105.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-24]
gi|418645086|ref|ZP_13207214.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-55]
gi|418646803|ref|ZP_13208896.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-88]
gi|418650585|ref|ZP_13212603.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-91]
gi|418658392|ref|ZP_13220120.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-111]
gi|418875489|ref|ZP_13429745.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418903856|ref|ZP_13457897.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418912160|ref|ZP_13466141.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914647|ref|ZP_13468619.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418925809|ref|ZP_13479711.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418948536|ref|ZP_13500834.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-157]
gi|419773145|ref|ZP_14299156.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CO-23]
gi|421148571|ref|ZP_15608231.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742667|ref|ZP_16796670.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|424768990|ref|ZP_18196227.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CM05]
gi|424785384|ref|ZP_18212187.1| rhomboid family serine protease [Staphylococcus aureus CN79]
gi|440707269|ref|ZP_20887968.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21282]
gi|443640018|ref|ZP_21124018.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21196]
gi|448743065|ref|ZP_21724979.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/Y21]
gi|13701347|dbj|BAB42641.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247320|dbj|BAB57711.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|57286128|gb|AAW38222.1| rhomboid family protein [Staphylococcus aureus subsp. aureus COL]
gi|87126822|gb|ABD21336.1| peptidase, rhomboid family [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|150374464|dbj|BAF67724.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156722002|dbj|BAF78419.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160368587|gb|ABX29558.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257271368|gb|EEV03514.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275176|gb|EEV06663.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278402|gb|EEV09038.1| peptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281753|gb|EEV11890.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
E1410]
gi|257283925|gb|EEV14048.1| peptidase [Staphylococcus aureus subsp. aureus M876]
gi|257848586|gb|EEV72574.1| peptidase [Staphylococcus aureus A9299]
gi|257861780|gb|EEV84579.1| peptidase [Staphylococcus aureus A5948]
gi|259160848|gb|EEW45868.1| hypothetical protein SA930_1642 [Staphylococcus aureus 930918-3]
gi|259162796|gb|EEW47361.1| hypothetical protein SAD30_0284 [Staphylococcus aureus D30]
gi|262075467|gb|ACY11440.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ED98]
gi|269941039|emb|CBI49423.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282313485|gb|EFB43880.1| peptidase [Staphylococcus aureus subsp. aureus C101]
gi|282317135|gb|EFB47509.1| peptidase [Staphylococcus aureus subsp. aureus C427]
gi|282319306|gb|EFB49658.1| peptidase [Staphylococcus aureus subsp. aureus D139]
gi|282321537|gb|EFB51862.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M899]
gi|282324882|gb|EFB55192.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282594446|gb|EFB99431.1| peptidase [Staphylococcus aureus A9765]
gi|283460772|gb|EFC07862.1| peptidase [Staphylococcus aureus subsp. aureus H19]
gi|290920255|gb|EFD97321.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095096|gb|EFE25361.1| peptidase [Staphylococcus aureus subsp. aureus 58-424]
gi|291466811|gb|EFF09331.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M809]
gi|294824606|gb|EFG41029.1| peptidase [Staphylococcus aureus A9754]
gi|298694831|gb|ADI98053.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
gi|304340589|gb|EFM06523.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315198756|gb|EFU29084.1| S54 family peptidase [Staphylococcus aureus subsp. aureus CGS01]
gi|320144103|gb|EFW35872.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440447|gb|EGA98159.1| rhomboid family peptidase [Staphylococcus aureus O11]
gi|323443221|gb|EGB00839.1| rhomboid family peptidase [Staphylococcus aureus O46]
gi|329314225|gb|AEB88638.1| Peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329730828|gb|EGG67206.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21193]
gi|334266823|gb|EGL85293.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21305]
gi|341843607|gb|EGS84829.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21269]
gi|341857602|gb|EGS98414.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21201]
gi|364522823|gb|AEW65573.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|365172061|gb|EHM62806.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21209]
gi|365173639|gb|EHM64128.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21178]
gi|365225551|gb|EHM66794.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus VCU006]
gi|365240520|gb|EHM81292.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21232]
gi|365241107|gb|EHM81862.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21340]
gi|371979181|gb|EHO96416.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21333]
gi|371985641|gb|EHP02702.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21283]
gi|374395556|gb|EHQ66819.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21343]
gi|375018355|gb|EHS11935.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-24]
gi|375023919|gb|EHS17364.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-55]
gi|375027871|gb|EHS21229.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-91]
gi|375032097|gb|EHS25352.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-88]
gi|375038662|gb|EHS31625.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-111]
gi|375371869|gb|EHS75629.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-157]
gi|377697501|gb|EHT21856.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377722417|gb|EHT46543.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|377742871|gb|EHT66856.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377744878|gb|EHT68855.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377758149|gb|EHT82037.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377769561|gb|EHT93329.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|383972969|gb|EID88990.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CO-23]
gi|394331714|gb|EJE57797.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|402348381|gb|EJU83373.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CM05]
gi|408423672|emb|CCJ11083.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408425662|emb|CCJ13049.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408427649|emb|CCJ15012.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408429638|emb|CCJ26803.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408431625|emb|CCJ18940.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408433619|emb|CCJ20904.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408435611|emb|CCJ22871.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408437595|emb|CCJ24838.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|421956794|gb|EKU09123.1| rhomboid family serine protease [Staphylococcus aureus CN79]
gi|436506025|gb|ELP41864.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21282]
gi|443406293|gb|ELS64877.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21196]
gi|445563752|gb|ELY19909.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/Y21]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|49483798|ref|YP_041022.1| hypothetical protein SAR1626 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282904131|ref|ZP_06312019.1| rhomboid family protein [Staphylococcus aureus subsp. aureus C160]
gi|282905958|ref|ZP_06313813.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908868|ref|ZP_06316686.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283958313|ref|ZP_06375764.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295428127|ref|ZP_06820759.1| hypothetical protein SIAG_00655 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590907|ref|ZP_06949545.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MN8]
gi|415682351|ref|ZP_11447667.1| hypothetical protein CGSSa00_07270 [Staphylococcus aureus subsp.
aureus CGS00]
gi|417887902|ref|ZP_12532021.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21195]
gi|418564826|ref|ZP_13129247.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21264]
gi|418582476|ref|ZP_13146554.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418597192|ref|ZP_13160725.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21342]
gi|418601009|ref|ZP_13164457.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21345]
gi|418901054|ref|ZP_13455110.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418909401|ref|ZP_13463397.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG149]
gi|418923231|ref|ZP_13477147.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418982555|ref|ZP_13530263.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418986221|ref|ZP_13533906.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|49241927|emb|CAG40621.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282327132|gb|EFB57427.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331250|gb|EFB60764.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595749|gb|EFC00713.1| rhomboid family protein [Staphylococcus aureus subsp. aureus C160]
gi|283790462|gb|EFC29279.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295128485|gb|EFG58119.1| hypothetical protein SIAG_00655 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575793|gb|EFH94509.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MN8]
gi|315195451|gb|EFU25838.1| hypothetical protein CGSSa00_07270 [Staphylococcus aureus subsp.
aureus CGS00]
gi|341856931|gb|EGS97758.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21195]
gi|371975963|gb|EHO93255.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21264]
gi|374395428|gb|EHQ66695.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21342]
gi|374400256|gb|EHQ71375.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21345]
gi|377702451|gb|EHT26773.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377704265|gb|EHT28575.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377704836|gb|EHT29145.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710886|gb|EHT35124.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377735190|gb|EHT59226.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377752048|gb|EHT75972.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG149]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|417649370|ref|ZP_12299174.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21189]
gi|440735000|ref|ZP_20914611.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|329728476|gb|EGG64913.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21189]
gi|436431095|gb|ELP28449.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus DSM
20231]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|326202014|ref|ZP_08191884.1| Rhomboid family protein [Clostridium papyrosolvens DSM 2782]
gi|325987809|gb|EGD48635.1| Rhomboid family protein [Clostridium papyrosolvens DSM 2782]
Length = 519
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + Q +R + M+LHA I+HL VN S+ ++ ++E+ FG R +Y ++G
Sbjct: 218 GAKVNNLIMEGQYWRFFTPMFLHADIVHLAVNCYSIYIIGAQVEKIFGRGRFLAIYFVAG 277
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GS S SVGASGA+FGL+G ML + + K + L ++I +
Sbjct: 278 LIGSAASFAFSLNS----SVGASGAIFGLVGAMLYFSLRRPALL--KSSYGVNLITMIVI 331
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVL 224
NLA+G + +DN AHIGG G L
Sbjct: 332 NLAYGVMN--KRIDNHAHIGGLVGGFL 356
>gi|418313141|ref|ZP_12924635.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21334]
gi|365236412|gb|EHM77301.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21334]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|379795908|ref|YP_005325906.1| putative serine protease [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872898|emb|CCE59237.1| putative serine protease [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIITSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G + + +Y +
Sbjct: 236 IGSWRMLGIYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGAIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLMIALVILIGVSLFMSNINIVAHIGGFVGGLLITLI 332
>gi|308197805|gb|ADO17919.1| rhomboid protease 1 [Mycobacterium smegmatis]
Length = 296
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
++ YRL++SM+LH G +HL+ NM +L +V LE+ G R LY LSG GGS+L ++
Sbjct: 121 DEYYRLVTSMFLHYGAMHLLFNMWALYVVGPPLEKWLGLTRFGVLYALSGLGGSVL--VY 178
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ GASGA+FGL G A + + + + +G ++ +NL F F+
Sbjct: 179 MLSPLNSATAGASGAIFGLFG-------AIFVVARHLNLDVRAIGVIVVINLVFTFVGPA 231
Query: 208 DG--VDNLAHIGGFASGVLLGFILFLRPQ 234
G + HIGG +G L+ P+
Sbjct: 232 LGTAISWQGHIGGLVTGALVASAFVYAPR 260
>gi|421896459|ref|ZP_16326856.1| membrane protein [Ralstonia solanacearum MolK2]
gi|206587624|emb|CAQ18206.1| membrane protein [Ralstonia solanacearum MolK2]
Length = 458
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
N L P IS L +LGG + V+ + +RLLS+ +LHAG++HL +NM L +E+
Sbjct: 117 NPLQTP-ISILFNLGG-NAAFEVQHGEWWRLLSATFLHAGVLHLAINMVGLYATGITVER 174
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
+G A +YL +G GS LS + + VGASGA+FG+ G L + +
Sbjct: 175 IYGPAAYLLIYLGAGLLGSALSLSF--AAQHAIGVGASGAVFGVAGAWLVAIGRYRGLMP 232
Query: 183 NKCTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ L+ LG + +LA G GVDN AHIGG G +L IL R
Sbjct: 233 QTLSKRLLTQLGLFVLYSLAQGLTK--PGVDNAAHIGGLVGGCVLAMILPAR 282
>gi|309792360|ref|ZP_07686828.1| Rhomboid family protein [Oscillochloris trichoides DG-6]
gi|308225581|gb|EFO79341.1| Rhomboid family protein [Oscillochloris trichoides DG6]
Length = 240
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 66 LGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
L P +S L LG N ++ +RLLS+ +LH +IH++ N +L + E+ +G
Sbjct: 38 LQPRLSVLVFLGA-KVNELIAAGAYWRLLSATFLHGSLIHILFNGYALYALGPETERIYG 96
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN-K 184
R LY L+G GGSL S L VSVGASGA+FGL+G + N + N
Sbjct: 97 TRRFLALYFLAGLGGSLASYL----LSPSVSVGASGAIFGLIGGLGIFYYLNRAVLGNFG 152
Query: 185 CTSLSVLGSVIALNLAFGF-IPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
+ + +V +NL GF P + +DN H+GG G++ G+ L P++ +
Sbjct: 153 KAQVQNMATVALINLFIGFSAPSI--IDNWGHLGGLVGGIVAGWA--LAPRF------MV 202
Query: 244 AAGYDAKHRQPKYMHYQQLCWIIALILLVL 273
G+ + Y Q W +AL+L++L
Sbjct: 203 DPGFYPPLMRRTY-PAQGWMWAVALVLVML 231
>gi|418892279|ref|ZP_13446392.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377730573|gb|EHT54640.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1176]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|296275094|ref|ZP_06857601.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MR1]
Length = 487
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|323509613|dbj|BAJ77699.1| cgd3_980 [Cryptosporidium parvum]
gi|323510471|dbj|BAJ78129.1| cgd3_980 [Cryptosporidium parvum]
Length = 282
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
+Y L P ++TL +L V++ Q +RLL S++LHA I H+V N+ + +S E
Sbjct: 68 SYALSPFVTTLIKFQASVPSL-VKEGQVWRLLVSLFLHASIWHIVFNIIFQIRLSLSCEV 126
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
++G +Y +SG G+L S +V+VGAS + FGL+G L+ELI W
Sbjct: 127 KYGRILNFTIYFISGLLGNLFSVAIRSSC--VVAVGASTSGFGLIGAQLAELILFWHTLQ 184
Query: 183 NKCTSLSVLGSVIALNLAFGFI--------PGVDGVDNLAHIGGFASGVLLGFI 228
NK V+ L FG + P +D+ HIGGF SG LG I
Sbjct: 185 NK-------EQVVINILLFGILMILITWGNPS-SAIDHWGHIGGFVSGTCLGII 230
>gi|380027526|ref|XP_003697473.1| PREDICTED: inactive rhomboid protein 1-like [Apis florea]
Length = 1022
Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL ++M+LHAGI+HL + + + LE+ G RIA +Y + G+L S +
Sbjct: 814 DQFYRLFTTMFLHAGILHLSITLLVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIF 873
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +GA F LL T++ E++ W + + +LS L V+ L G +P
Sbjct: 874 VPYRAE---VGPAGAHFALLATLIVEVLHCWPMLKHPRRALSKLIFVLIGLLILGILP-- 928
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
VDN AH+ GF G L + L +G YD + + L WI
Sbjct: 929 -WVDNYAHLFGFIFGFLAAYALLPFISFGQ---------YDRRRK-------IWLIWICM 971
Query: 268 LILLVL 273
++++VL
Sbjct: 972 ILIVVL 977
>gi|395768820|ref|ZP_10449335.1| hypothetical protein Saci8_03541 [Streptomyces acidiscabies 84-104]
Length = 298
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D+ V + Q YRLL+SM+LH IIH++ N SL + LE G AR L+ +SG
Sbjct: 123 GWDQLQGVAEGQWYRLLTSMFLHGSIIHILSNALSLWWIGGPLEAALGRARYLALFFVSG 182
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GS L+ L + + S+GASGA+FG+ G M + + + + +++ +
Sbjct: 183 LAGSALTYLVAEPNQ--ASLGASGAIFGVFGAMA-------VLMRRQRYDMRPMIAILVI 233
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
NL F G G+ AH+GG +GV++G + P+
Sbjct: 234 NLIITF--GWSGIAWQAHVGGLVAGVIIGAGMVYAPR 268
>gi|408419938|ref|YP_006761352.1| peptidase S54, rhomboid [Desulfobacula toluolica Tol2]
gi|405107151|emb|CCK80648.1| peptidase S54, rhomboid [Desulfobacula toluolica Tol2]
Length = 247
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
Y+L PS+ L LG R IV+ + L+++ WLH G++H++ NM +L V+ + E
Sbjct: 50 YVLTPSMDVLNFLGASGRLPIVKFEAWWSLITANWLHGGLLHILFNMLALKTVAPLVMYE 109
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML---SELIANWTI 180
+G R+ +Y L+G G LLS + + +++GAS L GL+G L W
Sbjct: 110 YGVCRMFTIYTLTGIAGFLLSYIGN----VYLTIGASSGLCGLIGAALYFGKSRGGQWGQ 165
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
K TS G V++L L GF+ + ++N H GG SGV LG++L
Sbjct: 166 LVYKQTS----GWVLSLVL-IGFL--MPNINNWGHAGGLISGVFLGWVL 207
>gi|330997596|ref|ZP_08321442.1| peptidase, S54 family [Paraprevotella xylaniphila YIT 11841]
gi|329570307|gb|EGG52042.1| peptidase, S54 family [Paraprevotella xylaniphila YIT 11841]
Length = 478
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R+ + ++H+G+IHL++N+ +L+ V LE G R+ +Y L+G S+ H
Sbjct: 107 WRVWTCNFVHSGLIHLIMNVYALLFVGLFLEPMLGSLRVVMVYSLAGLYSSVAGLFCH-- 164
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
+ +SVGASGA+FGL G + + L+ + + L +G I NL +G G + V
Sbjct: 165 -ADWISVGASGAIFGLYGALFARLLFYKGQSSWRKILLIAIGGFILYNLLYGI--GDNNV 221
Query: 211 DNLAHIGGFASGVLLGFI 228
DN AH GG +G LLG +
Sbjct: 222 DNAAHTGGLVAGFLLGVV 239
>gi|402572950|ref|YP_006622293.1| hypothetical protein Desmer_2505 [Desulfosporosinus meridiei DSM
13257]
gi|402254147|gb|AFQ44422.1| putative membrane protein [Desulfosporosinus meridiei DSM 13257]
Length = 314
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N +++ + +R L+S+++H G +HL+ N+ +L + E+ FG R +Y++SG
Sbjct: 165 GAKVNPLIQAGELWRFLTSVFIHIGFLHLLFNLYALWSLGPISERNFGHWRFLVIYIMSG 224
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL--SVLGS-- 193
GGS+ S +S GASGA+FGLLG +L Y+ K SL S LG
Sbjct: 225 LGGSIASYFFSTA----LSAGASGAIFGLLGALL--------YYSLKRPSLWKSGLGMNL 272
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
VI + + FGF G+DN AH+GG G L +L
Sbjct: 273 VIVIIINFGFGLTQPGIDNYAHLGGLIIGFLTTMLL 308
>gi|256850860|ref|ZP_05556249.1| membrane-associated serine protease [Lactobacillus jensenii
27-2-CHN]
gi|260661071|ref|ZP_05861985.1| membrane-associated serine protease [Lactobacillus jensenii
115-3-CHN]
gi|256615922|gb|EEU21110.1| membrane-associated serine protease [Lactobacillus jensenii
27-2-CHN]
gi|260548008|gb|EEX23984.1| membrane-associated serine protease [Lactobacillus jensenii
115-3-CHN]
Length = 215
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 71 STLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIA 130
+ L LG ++ Q +RL ++ +LH G++HLVVN +L + LE G R
Sbjct: 26 AVLFKLGAQFNPAVIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHVRFL 85
Query: 131 PLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWT-----IYANKC 185
+YLL+G GG+L++ G VS GAS ALFGL G M++ IAN T +
Sbjct: 86 IIYLLAGVGGNLMTMAF--GSDNAVSAGASTALFGLFGAMIALGIANRTHEGMAYLGRQS 143
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
L+V+ + +N V +D H+GG +G LL IL + GY
Sbjct: 144 FVLAVINLLFDIN--------VPQIDTWGHVGGLIAGFLLTVILGDQNLRGY 187
>gi|138896022|ref|YP_001126475.1| hypothetical protein GTNG_2385 [Geobacillus thermodenitrificans
NG80-2]
gi|134267535|gb|ABO67730.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 386
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 14/150 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +R L+ M+LH G +HL+ N +L + +E+ +G R +Y +G
Sbjct: 212 GAKFNPLIEMGEWWRFLTPMFLHIGFLHLLTNTFALYYLGITVERLYGSLRFLLIYTTAG 271
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + ++V+ S+
Sbjct: 272 FFGTLASFLFTPS----ISAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVV-SL 322
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
I +NL FG + V G+DN HIGG G L
Sbjct: 323 IVVNLLFGLL--VPGIDNAGHIGGLVGGFL 350
>gi|239637639|ref|ZP_04678611.1| rhomboid family protein [Staphylococcus warneri L37603]
gi|239596857|gb|EEQ79382.1| rhomboid family protein [Staphylococcus warneri L37603]
Length = 484
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L D+GGL +V + YRL++SM+LH H+++NM SL + +E G ++ +
Sbjct: 186 LLDVGGLVHFNVVH-GEWYRLVTSMFLHYNFEHILMNMLSLYIFGKIVESVLGSWKMLAI 244
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YL +G G+ +S + +SVGASGA+FGL+G++ + +Y +K V+G
Sbjct: 245 YLFAGIFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------ILYLSKTFDKKVIG 295
Query: 193 S-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
+IAL + G + ++ +AH+GGF G+L+ I
Sbjct: 296 QLLIALVILIGLSLFMSNINVMAHLGGFVGGLLITLI 332
>gi|207738893|ref|YP_002257286.1| membrane protein [Ralstonia solanacearum IPO1609]
gi|206592264|emb|CAQ59170.1| membrane protein [Ralstonia solanacearum IPO1609]
Length = 543
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 88/172 (51%), Gaps = 8/172 (4%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
N L P IS L LGG + V+ + +RLLS+ +LHAG++HL +NM L +E+
Sbjct: 202 NPLQTP-ISVLFSLGG-NAAFEVQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVER 259
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
+G A +YL +G GS LS + + VGASGA+FG+ G L + +
Sbjct: 260 IYGPAAYLLIYLGAGLLGSALSLSF--AAQHAIGVGASGAVFGVAGAWLVAIGRYRGLMP 317
Query: 183 NKCTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ L+ LG + +LA G GVDN AHIGG G +L IL R
Sbjct: 318 QTLSKRLLTQLGLFVLYSLAQGLTK--PGVDNAAHIGGLVGGCMLAMILPAR 367
>gi|161507831|ref|YP_001577795.1| hypothetical protein lhv_1567 [Lactobacillus helveticus DPC 4571]
gi|160348820|gb|ABX27494.1| putative membrane protein [Lactobacillus helveticus DPC 4571]
Length = 226
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+ L +G ++ +V +Q +RL ++ +LH G++HLV N + + +E G
Sbjct: 34 ENINVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHV 93
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R YLL+G GG+L S + +S GAS ALFGL G M++ + N ++ +
Sbjct: 94 RFLVTYLLAGIGGNLFSLAFSSDRG--LSAGASTALFGLFGAMVAIGLRN--LHNPMISF 149
Query: 188 LSVLGSVIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
L V+AL NLA F+P G+D HIGG +G LL IL R Y + + A
Sbjct: 150 LGRQALVLALINLALDIFVP---GIDIWGHIGGLITGFLLAIILGDRVMRTYNPKWRVLA 206
Query: 246 G 246
G
Sbjct: 207 G 207
>gi|260103121|ref|ZP_05753358.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260083068|gb|EEW67188.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 227
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+ L +G ++ +V +Q +RL ++ +LH G++HLV N + + +E G
Sbjct: 34 ENINVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHF 93
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R YLL+G GG+L S + +S GAS ALFGL G M++ + N ++ +
Sbjct: 94 RFLVTYLLAGIGGNLFSLAFSSDRG--LSAGASTALFGLFGAMVAIGLRN--LHNPMISF 149
Query: 188 LSVLGSVIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
L V+AL NLA F+P G+D HIGG +G LL IL R Y + + A
Sbjct: 150 LGRQALVLALINLALDIFVP---GIDIWGHIGGLITGFLLAIILGDRVMRTYNPKWLVLA 206
Query: 246 G 246
G
Sbjct: 207 G 207
>gi|374581478|ref|ZP_09654572.1| putative membrane protein [Desulfosporosinus youngiae DSM 17734]
gi|374417560|gb|EHQ89995.1| putative membrane protein [Desulfosporosinus youngiae DSM 17734]
Length = 313
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 9/157 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N +++ + +R +SM++H G +HL+ N+ + + +E+ FG R +Y LSG
Sbjct: 166 GAKVNSLIQAGEIWRFFTSMFIHIGFMHLIFNLYAFWSLGPFIEERFGHWRFFTIYSLSG 225
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GGS+ S +S GASGA+FGLLG + I +++ + + V+ L
Sbjct: 226 LGGSIASFFFSPA----LSAGASGAIFGLLGALFYYSIKRPSLWKSGLG----MNLVLVL 277
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ GF + G+DN AH+GG +G++ IL +P
Sbjct: 278 LINLGFGLTMPGIDNFAHLGGLLTGIITS-ILLTKPD 313
>gi|83646149|ref|YP_434584.1| hypothetical protein HCH_03410 [Hahella chejuensis KCTC 2396]
gi|83634192|gb|ABC30159.1| uncharacterized membrane protein [Hahella chejuensis KCTC 2396]
Length = 294
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 22/158 (13%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ Q +RL ++++LH GI+HL +N +L +E+ +G R +++ SG G+L S
Sbjct: 58 TQNGQWWRLDAAIFLHFGIVHLTLNAWALWDGGQWVERMYGQMRFLIIFITSGLIGNLFS 117
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIAN----------WTIYANKCTSLSVLGSV 194
H +VS GASG +FG+ G +LS L N W + SL
Sbjct: 118 LALH--VVSVVSAGASGGIFGVYGALLSYLWLNKSRVPLTEFRWLFFGAAIFSL------ 169
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
L + GF+ +DGVDN AH GGF +G++LG +L R
Sbjct: 170 --LTIFLGFL--IDGVDNAAHGGGFITGLILGALLIPR 203
>gi|294139344|ref|YP_003555322.1| rhomboid family protein [Shewanella violacea DSS12]
gi|293325813|dbj|BAJ00544.1| rhomboid family protein [Shewanella violacea DSS12]
Length = 284
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
IV N + LLS M+LH ++HL NM L +V LE G R LYLL GF +
Sbjct: 113 IVDGNHVWTLLSHMFLHGDLMHLAGNMYFLYVVGDNLEDSLGRMRFLGLYLLCGFAAAAA 172
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTML-----SELIANWTIYANKCTSLSVLGSVIALN 198
+ I VGASGA+ GL G L + L + IY K + ++ +A N
Sbjct: 173 QIMADP-TSGIYMVGASGAIAGLFGMYLLWFRHASLTFMFVIYQKKLSPMAFFTIWLAFN 231
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ G + +GV AHIGGFA+G+++G ++
Sbjct: 232 I-LGMLMAGEGVAYWAHIGGFAAGLVIGLLM 261
>gi|418931854|ref|ZP_13485689.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377713032|gb|EHT37245.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1750]
Length = 470
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 160 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 218
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 219 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 269
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 270 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 315
>gi|441213690|ref|ZP_20975936.1| peptidase, S54 family [Mycobacterium smegmatis MKD8]
gi|440625654|gb|ELQ87500.1| peptidase, S54 family [Mycobacterium smegmatis MKD8]
Length = 250
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 77 GGLDRNL------IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIA 130
G L R L I ++ YRL++SM+LH G +HL+ NM +L +V LEQ G R
Sbjct: 58 GALKRELALQPASIAAYDEYYRLVTSMFLHYGAMHLLFNMWALYVVGPPLEQWLGRLRFG 117
Query: 131 PLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSV 190
LY LSG GGS+L ++ + GASGA+FGL G + + + + +
Sbjct: 118 VLYALSGLGGSVL--VYMLSPLNSATAGASGAIFGLFGAI-------FVVARHLNLDVRA 168
Query: 191 LGSVIALNLAFGFIPGVDG--VDNLAHIGGFASGVLLGFILFLRPQ 234
+G ++ +NL F F+ G + HIGG +G L+ P+
Sbjct: 169 IGVIVVINLVFTFVGPALGTAISWQGHIGGLVTGALVASAFVYAPR 214
>gi|440302909|gb|ELP95215.1| hypothetical protein EIN_430110 [Entamoeba invadens IP1]
Length = 335
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 87/168 (51%), Gaps = 4/168 (2%)
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
F+ N++LGP+ + LG D + + + +RL++ ++LHAGIIHLV N++ + +
Sbjct: 123 FEKPSINWMLGPTSDAMDILGAKDAKKMKEQYELWRLITPIFLHAGIIHLVCNLSMQLRL 182
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
+E+ R +Y + G G+ S + + VGASGAL + G L ++I
Sbjct: 183 GMIIERRMNTLRFLIVYFVGGIIGNCFSVMIFPTTQ---GVGASGALLAVFGGFLIDIIL 239
Query: 177 NWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
N + ++ +S++G ++ + + + G+D AHI GF G +
Sbjct: 240 NKNKFPSR-QWISLIGQLLISTIIIFVLSFMPGIDYAAHIFGFIGGAV 286
>gi|418906494|ref|ZP_13460520.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418928899|ref|ZP_13482785.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377738811|gb|EHT62820.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377763399|gb|EHT87255.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 470
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 160 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 218
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 219 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 269
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 270 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 315
>gi|168210042|ref|ZP_02635667.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
gi|170711841|gb|EDT24023.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
Length = 342
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G N I+ + YRL++SM+LH GI+HL+ NM +L ++ +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG S+ S ++ VGASGA+FGLLG L + +++ ++I
Sbjct: 249 SGIVASIFSLYF----SPVMGVGASGAIFGLLGAALV-----FAYNEKDRIGKALVTNII 299
Query: 196 ALNLAFGFIP-GVDGVDNLAHIGGFASGVLLG 226
+ L FI + +D AH GGF +G +LG
Sbjct: 300 VIILLNVFISLSMSNIDISAHFGGFIAGAILG 331
>gi|425744558|ref|ZP_18862613.1| peptidase, S54 family [Acinetobacter baumannii WC-323]
gi|425490154|gb|EKU56454.1| peptidase, S54 family [Acinetobacter baumannii WC-323]
Length = 268
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 84/166 (50%), Gaps = 24/166 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H G+IHL++NM +L + EQ FG + LY+L+G
Sbjct: 54 GADFTPLTFSGQAERLFTSMFFHFGLIHLMLNMWALYIFGSVAEQLFGRSYYIALYVLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSEL-----IANWTI 180
GS+LS L H K + +S GASGA+ G LG L+ + +
Sbjct: 114 LMGSVLSSYLSIRDGYALLQHFDPKLLPHISAGASGAVMG-LGAALTVISLFPPLPQQRF 172
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
+K + L V+G +NL FGF V G++N AHIGG G LL
Sbjct: 173 LLDKKSLLMVMG----INLVFGFT--VSGINNAAHIGGMLMGALLA 212
>gi|326792345|ref|YP_004310166.1| peptidase S9 prolyl oligopeptidase active site domain-containing
protein [Clostridium lentocellum DSM 5427]
gi|326543109|gb|ADZ84968.1| Peptidase S54, rhomboid domain [Clostridium lentocellum DSM 5427]
Length = 518
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 14/150 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + +R ++ ++LH ++HL+VN SL ++ +E+ +G R YL++G
Sbjct: 218 GAKVNNLILEGEYWRFITPIFLHGSLMHLLVNCYSLYIIGSLVERLYGRGRFITSYLIAG 277
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS---ELIANWTIYANKCTSLSVLGSV 194
G+L S L G SVGASGA+FGL+G +L E + +Y S + +
Sbjct: 278 ILGNLCSFLFVPGP----SVGASGAIFGLMGILLYFGLERPLQFKVYFG-----SSIITT 328
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
I +NL +GF G+DN AH+GG G L
Sbjct: 329 ILINLVYGF--SSTGIDNFAHLGGLIGGFL 356
>gi|406862658|gb|EKD15708.1| rhomboid family protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 570
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 36 CPAKTA-DSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLL 94
CP T+ D C L + G + + G + L ++ + NQ +R +
Sbjct: 250 CPDTTSNDEQDCTLAQLCG-FGMPDSQNPVYPGSTTDALNEIAN-------QPNQWFRFI 301
Query: 95 SSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEI 154
++LHAG+IH+ NM + + +E G R +Y SG G +L + I
Sbjct: 302 VPIFLHAGLIHIGFNMLLQLTLGKDMEIAIGPIRYFLVYFSSGIFGFVLG--GNFAAVGI 359
Query: 155 VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLA 214
S GASGALFG++ L +L+ W+ + + + ++ G +P G+DN +
Sbjct: 360 ASTGASGALFGVIALNLLDLLYTWSERRSPWKDFAFIMLDCVISFGLGLLP---GLDNFS 416
Query: 215 HIGGFASGVLLGFILF-----LRPQYGYVSEKYIAA 245
HIGGF G+ LG + LR + G Y+ A
Sbjct: 417 HIGGFLMGLALGICILHSPNALRKRIGQDDPPYVVA 452
>gi|332853689|ref|ZP_08434919.1| peptidase, S54 family [Acinetobacter baumannii 6013150]
gi|332870868|ref|ZP_08439513.1| peptidase, S54 family [Acinetobacter baumannii 6013113]
gi|332728513|gb|EGJ59887.1| peptidase, S54 family [Acinetobacter baumannii 6013150]
gi|332731969|gb|EGJ63247.1| peptidase, S54 family [Acinetobacter baumannii 6013113]
Length = 269
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSRQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGL-----LGTMLSELIANWTI 180
GSLLS L H + + VS GASGA+ GL + ++ S L I
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFSPLPHQAYI 173
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
K L ++A+NL FGF+ G++N AH+GG G LL I +L
Sbjct: 174 LDKKS-----LLMIMAINLIFGFV--ATGINNAAHVGGMIMGALLALIWYL 217
>gi|88800271|ref|ZP_01115838.1| hypothetical protein MED297_14685 [Reinekea blandensis MED297]
gi|88776986|gb|EAR08194.1| hypothetical protein MED297_14685 [Reinekea sp. MED297]
Length = 209
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V Q +RL +S+++H G++HLV N S + + LE G ++L +G S+ S
Sbjct: 53 VDAGQWWRLGTSIFVHFGLMHLVFNSVSTLFLGRFLEPLLGHVAFIVVFLTTGLCASMAS 112
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
+ + KE+ S GASGA+FGL G + +++N + L +G ++ +NL G
Sbjct: 113 YVFN---KEVYSAGASGAVFGLFGLFIVLVLSNLVRPEVRNEWLKSIGVILVINLGMGL- 168
Query: 205 PGVDGVDNLAHIGGFASGVLLGFI 228
V VDN AH+GG ASG++ G I
Sbjct: 169 --VLPVDNAAHLGGLASGLVAGVI 190
>gi|417643203|ref|ZP_12293263.1| peptidase, S54 family [Staphylococcus warneri VCU121]
gi|330685982|gb|EGG97605.1| peptidase, S54 family [Staphylococcus epidermidis VCU121]
Length = 405
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L D+GGL +V + YRL++SM+LH H+++NM SL + +E G ++ +
Sbjct: 186 LLDVGGLVHFNVVH-GEWYRLVTSMFLHFNFEHILMNMLSLYIFGKIVESVLGSWKMLAI 244
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YL +G G+ +S + +SVGASGA+FGL+G++ + L Y +K V+G
Sbjct: 245 YLFAGIFGNFVSLSFNTTT---ISVGASGAIFGLIGSIFAIL------YLSKTFDKRVIG 295
Query: 193 S-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
+IAL + G + ++ +AH+GGF G+L+ I
Sbjct: 296 QLLIALVILIGLSLFMSNINVMAHLGGFIGGLLITLI 332
>gi|449302177|gb|EMC98186.1| hypothetical protein BAUCODRAFT_121073 [Baudoinia compniacensis
UAMH 10762]
Length = 520
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 35 NCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLL 94
N + T DS C L ++ G +S P N +G SI N NQ +R +
Sbjct: 208 NATSATGDSVSCTLSELCG-FSGVP---NPHVGGSI-----------NDKPAPNQWWRFI 252
Query: 95 SSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEI 154
++LHAGIIH+ N+ + + +E+ G R +Y +G G +L + I
Sbjct: 253 VPIFLHAGIIHIAFNLLLQLTLGADVEKLIGSIRFTIVYFAAGIFGFVLG--GNFAANGI 310
Query: 155 VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLA 214
S G SG+LFG+L L +L+ W L + + + G +P G+DN +
Sbjct: 311 ASCGCSGSLFGILAITLLDLLYTWHQREGPIKDLLFILIDVIIAFVLGLLP---GLDNFS 367
Query: 215 HIGGFASGVLLGFILFLRP 233
HIGGF G++LG + P
Sbjct: 368 HIGGFLMGLVLGVCILRSP 386
>gi|384867478|ref|YP_005747674.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH60]
gi|417901080|ref|ZP_12544957.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21266]
gi|418652792|ref|ZP_13214755.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-99]
gi|418955633|ref|ZP_13507570.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-189]
gi|312437983|gb|ADQ77054.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH60]
gi|341846239|gb|EGS87436.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21266]
gi|375020960|gb|EHS14467.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-99]
gi|375370719|gb|EHS74517.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-189]
Length = 426
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 116 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 174
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 175 IGSWRMLTVYFIAGLFGNFVSLSFNTTT---ISVGASGAIFGLIGSIFA------MMYVS 225
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 226 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 271
>gi|431793836|ref|YP_007220741.1| hypothetical protein Desdi_1896 [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784062|gb|AGA69345.1| putative membrane protein [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 321
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + +RL +SM+LH G+IHL N+ +L + LE+ FG R +Y+ SG
Sbjct: 175 GAKVNSLILQGEYWRLFTSMFLHIGVIHLAFNLYALWALGPILEELFGRIRYLLIYISSG 234
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GS S L + +S GASGA+FG+LG ++ + ++ + V+ ++ +
Sbjct: 235 VMGSAASFLF----TDAISAGASGAIFGILGALVVYSRSKPFLWKSGFGKNLVI--IVLI 288
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLL 225
NL+ GF G+D AHIGG SG+LL
Sbjct: 289 NLSIGFFQ--PGIDVYAHIGGLLSGMLL 314
>gi|209877288|ref|XP_002140086.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555692|gb|EEA05737.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 892
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 101/230 (43%), Gaps = 27/230 (11%)
Query: 12 RAWLTPV---IFVVCIIMFVYT-----MHVNNCPAKTADSHQCVLRDILGRYSFQPWKEN 63
+ W+ PV +FVV F T V N K + C G +P+K N
Sbjct: 464 KKWINPVHGRLFVVLTTSFALTGVFLQSLVFNRLNKWGSPNNC------GGVFVEPFKTN 517
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
+LG L LGGL N + R RL +MW+HAG IH+ N+ S + Y +E +
Sbjct: 518 PMLGACPEALNVLGGLVVNEL-RNGGVIRLFWAMWMHAGFIHIGFNVLSQAQLGYMMEPD 576
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
+G R L+ LS GG+L + ++VG+SG LFG+ L +W N
Sbjct: 577 WGMTRFFFLFFLSAIGGNLTVSVISPCS---LTVGSSGGLFGITAAGLVYTFEHWKNLPN 633
Query: 184 K--CTSLSVLGSVIALNLAFGFIPGVDGVDNL-AHIGGFASGVLLGFILF 230
+ +I + L+F GV N AH+GGF+ G+L F
Sbjct: 634 PLFLFVFDIFSVIIGMVLSF------TGVTNPWAHVGGFSVGLLYTLATF 677
>gi|169796815|ref|YP_001714608.1| hypothetical protein ABAYE2805 [Acinetobacter baumannii AYE]
gi|213156792|ref|YP_002318453.1| rhomboid family protein [Acinetobacter baumannii AB0057]
gi|215484293|ref|YP_002326520.1| protein aarA [Acinetobacter baumannii AB307-0294]
gi|301346721|ref|ZP_07227462.1| Protein aarA [Acinetobacter baumannii AB056]
gi|301511811|ref|ZP_07237048.1| Protein aarA [Acinetobacter baumannii AB058]
gi|301596516|ref|ZP_07241524.1| Protein aarA [Acinetobacter baumannii AB059]
gi|417555059|ref|ZP_12206128.1| peptidase, S54 family [Acinetobacter baumannii Naval-81]
gi|417561186|ref|ZP_12212065.1| peptidase, S54 family [Acinetobacter baumannii OIFC137]
gi|417573815|ref|ZP_12224669.1| peptidase, S54 family [Acinetobacter baumannii Canada BC-5]
gi|421200790|ref|ZP_15657949.1| peptidase, S54 family [Acinetobacter baumannii OIFC109]
gi|421456487|ref|ZP_15905829.1| peptidase, S54 family [Acinetobacter baumannii IS-123]
gi|421620511|ref|ZP_16061443.1| peptidase, S54 family [Acinetobacter baumannii OIFC074]
gi|421635509|ref|ZP_16076111.1| peptidase, S54 family [Acinetobacter baumannii Naval-13]
gi|421643547|ref|ZP_16084041.1| peptidase, S54 family [Acinetobacter baumannii IS-235]
gi|421646202|ref|ZP_16086654.1| peptidase, S54 family [Acinetobacter baumannii IS-251]
gi|421658609|ref|ZP_16098840.1| peptidase, S54 family [Acinetobacter baumannii Naval-83]
gi|421700317|ref|ZP_16139834.1| peptidase, S54 family [Acinetobacter baumannii IS-58]
gi|421796126|ref|ZP_16232195.1| peptidase, S54 family [Acinetobacter baumannii Naval-21]
gi|421801828|ref|ZP_16237785.1| peptidase, S54 family [Acinetobacter baumannii Canada BC1]
gi|421805047|ref|ZP_16240941.1| peptidase, S54 family [Acinetobacter baumannii WC-A-694]
gi|169149742|emb|CAM87633.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii AYE]
gi|213055952|gb|ACJ40854.1| rhomboid family protein [Acinetobacter baumannii AB0057]
gi|213988445|gb|ACJ58744.1| Protein aarA [Acinetobacter baumannii AB307-0294]
gi|395523768|gb|EJG11857.1| peptidase, S54 family [Acinetobacter baumannii OIFC137]
gi|395562822|gb|EJG24475.1| peptidase, S54 family [Acinetobacter baumannii OIFC109]
gi|400209383|gb|EJO40353.1| peptidase, S54 family [Acinetobacter baumannii Canada BC-5]
gi|400210915|gb|EJO41879.1| peptidase, S54 family [Acinetobacter baumannii IS-123]
gi|400391476|gb|EJP58523.1| peptidase, S54 family [Acinetobacter baumannii Naval-81]
gi|404570699|gb|EKA75772.1| peptidase, S54 family [Acinetobacter baumannii IS-58]
gi|408508230|gb|EKK09916.1| peptidase, S54 family [Acinetobacter baumannii IS-235]
gi|408517589|gb|EKK19127.1| peptidase, S54 family [Acinetobacter baumannii IS-251]
gi|408700198|gb|EKL45661.1| peptidase, S54 family [Acinetobacter baumannii OIFC074]
gi|408702328|gb|EKL47741.1| peptidase, S54 family [Acinetobacter baumannii Naval-13]
gi|408709305|gb|EKL54551.1| peptidase, S54 family [Acinetobacter baumannii Naval-83]
gi|410400322|gb|EKP52501.1| peptidase, S54 family [Acinetobacter baumannii Naval-21]
gi|410405085|gb|EKP57138.1| peptidase, S54 family [Acinetobacter baumannii Canada BC1]
gi|410410097|gb|EKP62017.1| peptidase, S54 family [Acinetobacter baumannii WC-A-694]
Length = 269
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGL-----LGTMLSELIANWTI 180
GSLLS L H + + VS GASGA+ GL + ++ S L I
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFSPLPHQAYI 173
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
K L ++A+NL FGF+ G++N AH+GG G LL I +L
Sbjct: 174 LDKKS-----LLMIMAINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLS 218
>gi|154483847|ref|ZP_02026295.1| hypothetical protein EUBVEN_01551 [Eubacterium ventriosum ATCC
27560]
gi|149735338|gb|EDM51224.1| peptidase, S54 family [Eubacterium ventriosum ATCC 27560]
Length = 201
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 17/156 (10%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I Q YR+L+SM++H G HL+ NM L ++ Y++E+ FG + Y + G G ++
Sbjct: 50 IFENGQWYRILTSMFMHFGAEHLINNMVMLYILGYQIEENFGRVKYLITYFICGIAGGII 109
Query: 144 SC-LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
S + + +S GASGA+FG+ G +L + S LG V A L
Sbjct: 110 SSGIEMITGEYSISAGASGAIFGIFGVLLVMIF----------KSRKQLGQVSAPRLILL 159
Query: 203 FIPGV-----DGVDNLAHIGGFASGVLLGFILFLRP 233
FI V +GVD +AH+GG +GV++ ++ RP
Sbjct: 160 FILMVFGNMQEGVDWMAHLGGAVTGVVIALAIY-RP 194
>gi|145221663|ref|YP_001132341.1| rhomboid family protein [Mycobacterium gilvum PYR-GCK]
gi|145214149|gb|ABP43553.1| Rhomboid family protein [Mycobacterium gilvum PYR-GCK]
Length = 279
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 27/205 (13%)
Query: 35 NCPAKTADSHQCV------LRDILGRYSFQPWKENYLLGPSISTLR---DLGGLDRNL-- 83
C A HQC+ +R + + P L+G ++ GL R
Sbjct: 37 ECMRDAAVGHQCIDCVGEGMRSVRPVKTLTPVVTYALIGINLLAFALQMASPGLQRAFGL 96
Query: 84 ---IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGG 140
V + YRLL+S +LH G+ HL NM +L V LE G AR LYL+S GG
Sbjct: 97 WSPAVADGEMYRLLTSAFLHFGLTHLAFNMLALYFVGPPLEAALGRARFITLYLVSALGG 156
Query: 141 SLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLA 200
S+L L ++ GASGA+FGL G A + + + + ++I LNLA
Sbjct: 157 SVLVYLL---TLNALTAGASGAVFGLFG-------ATFVVGRKLNMDVRSVMAIIVLNLA 206
Query: 201 FGFIPGVDGVDNLA---HIGGFASG 222
F F+ + N++ HIGG +G
Sbjct: 207 FTFLIPLFTSQNISWQGHIGGLVTG 231
>gi|418476663|ref|ZP_13045815.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
gi|371542672|gb|EHN71698.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
Length = 297
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + Q YRLL++M+LH G +H++ NM SL + LE G AR LY SG GS L+
Sbjct: 129 VAEGQWYRLLTAMFLHTGYMHILFNMLSLWWLGGPLEGALGRARYLALYFCSGLAGSALT 188
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L + + S+GASGA+FGL G A T+ + + ++A+NL F F
Sbjct: 189 YLIAEPNQP--SLGASGAIFGLFG-------ATATLVRRLNADMRPVVILLAINLVFTFT 239
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ AH+GG +G ++G+ + P+
Sbjct: 240 --WANIAWQAHVGGLVAGAVIGYAMLHAPR 267
>gi|367024201|ref|XP_003661385.1| hypothetical protein MYCTH_2300708 [Myceliophthora thermophila ATCC
42464]
gi|347008653|gb|AEO56140.1| hypothetical protein MYCTH_2300708 [Myceliophthora thermophila ATCC
42464]
Length = 551
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 36 CPAKTADS-----HQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQK 90
CP+ T + +QC L D+ G + P + Y G + T NQ
Sbjct: 267 CPSTTTNDPNSPENQCTLGDLCG-FGGVP-EPAYKPGTPLDTKP-----------APNQW 313
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R + +++HAG+IH+ NM + ++ +E+ G R +Y+ +G G ++ +
Sbjct: 314 FRFIIPIFMHAGVIHIGFNMLLQLTLARDMEKSIGSIRFFLVYMSAGIFGFVMGG--NYA 371
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
+ S GASG+LFG++ L +L+ +W + L + + ++ G +P G+
Sbjct: 372 GNAVASTGASGSLFGIIALTLLDLLYSWKDRVSPVKDLVFILLDVIISFVLGLLP---GL 428
Query: 211 DNLAHIGGFASGVLLGFILFLRPQ 234
DN +HIGGF G+ LG + P
Sbjct: 429 DNFSHIGGFLMGLALGICVLHSPN 452
>gi|383113335|ref|ZP_09934107.1| hypothetical protein BSGG_3039 [Bacteroides sp. D2]
gi|382948721|gb|EFS32339.2| hypothetical protein BSGG_3039 [Bacteroides sp. D2]
Length = 592
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++H G HL++NM + M V LE+ G R+ YLL+G + S H
Sbjct: 210 WRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELIGGRRMFVSYLLTGLCSAAFSLYMH-- 267
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
E +S GASG++FGL G L+ L+ + + L+ + + NL +G G+
Sbjct: 268 -GETISTGASGSIFGLYGIFLAFLLFHRIAKEQRKALLTSILIFVGYNLVYGMKA---GI 323
Query: 211 DNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
DN AHIGG SG +LG I + GY EK
Sbjct: 324 DNAAHIGGLLSGFVLGIIYVV----GYKFEK 350
>gi|302552712|ref|ZP_07305054.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
gi|302470330|gb|EFL33423.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
Length = 296
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + YR+++SM+ H I H+ NM SL + LE G R LYL+SG GS L+
Sbjct: 127 VAGGEWYRMVTSMFTHQEIWHIAFNMLSLWWLGGPLEAALGRVRYLALYLVSGLAGSALA 186
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L ++GASGA+FGL G A + + + +++A+NL F F
Sbjct: 187 YL--LASPNTATLGASGAIFGLFG-------ATAVLMRRLNYDMRPIIALLAINLIFTFS 237
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
PG + + AHIGG +GV++G+ + P+
Sbjct: 238 PGFN-ISWQAHIGGLVAGVVIGYAMVHAPR 266
>gi|417545846|ref|ZP_12196932.1| peptidase, S54 family [Acinetobacter baumannii OIFC032]
gi|421667065|ref|ZP_16107147.1| peptidase, S54 family [Acinetobacter baumannii OIFC087]
gi|421669854|ref|ZP_16109867.1| peptidase, S54 family [Acinetobacter baumannii OIFC099]
gi|400383734|gb|EJP42412.1| peptidase, S54 family [Acinetobacter baumannii OIFC032]
gi|410386537|gb|EKP39008.1| peptidase, S54 family [Acinetobacter baumannii OIFC087]
gi|410387323|gb|EKP39779.1| peptidase, S54 family [Acinetobacter baumannii OIFC099]
Length = 269
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 24/171 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GI+HL++NM +L + E F + LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIVHLMLNMGALYIFGKVAEVLFSRSYFIILYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ G LGT L+ L +++
Sbjct: 114 VFGSLLSSYINIQNGYELLQHFDQSLLPHVSAGASGAIMG-LGTALTVL----SLFPPLP 168
Query: 186 TSLSVLGS-----VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
+ +L +A+NL FGF+ G++N AH+GG G LL I +L
Sbjct: 169 HQVRILNKKVYLVTMAINLMFGFV--ATGINNAAHVGGMIIGALLALIWYL 217
>gi|156741085|ref|YP_001431214.1| rhomboid family protein [Roseiflexus castenholzii DSM 13941]
gi|156232413|gb|ABU57196.1| Rhomboid family protein [Roseiflexus castenholzii DSM 13941]
Length = 281
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G D I Q YR L++M+LH G+ HL N +L + + E+ FG R +Y+L+
Sbjct: 89 GAKDNAAIFVGGQYYRFLTAMFLHGGLAHLFFNSFALYSLGFETERLFGAQRFLAIYMLA 148
Query: 137 GFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS-ELIANWTIYANKCTSLSVLGSVI 195
G GG + S + SVGASGA+FGL+G +++ L+A + L L +
Sbjct: 149 GLGGGVASYALNPNP----SVGASGAIFGLIGALIAFYLVARRVLGGIARQQLGSLIFIT 204
Query: 196 ALNLAFGFIPGVDGVDNLAHI 216
+NLA GF +DN AHI
Sbjct: 205 LINLALGFT--TPYIDNNAHI 223
>gi|418920630|ref|ZP_13474562.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377764356|gb|EHT88209.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC348]
Length = 370
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 60 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 118
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 119 IGSWRMLTVYFIAGLFGNFVSLSFN---TTTISVGASGAIFGLIGSIFA------MMYVS 169
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 170 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 215
>gi|418952134|ref|ZP_13504176.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-160]
gi|375369792|gb|EHS73653.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-160]
Length = 303
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 116 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 174
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S +SVGASGA+FGL+G++ + +Y +
Sbjct: 175 IGSWRMLTVYFIAGLFGNFVSL---SFNTTTISVGASGAIFGLIGSIFA------MMYVS 225
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +I+L + G + ++ +AHIGGF G+L+ I
Sbjct: 226 KTFNKKMLGQLLISLVILVGVSLFMSNINIVAHIGGFIGGLLITLI 271
>gi|423298194|ref|ZP_17276253.1| hypothetical protein HMPREF1070_04918 [Bacteroides ovatus
CL03T12C18]
gi|392663610|gb|EIY57158.1| hypothetical protein HMPREF1070_04918 [Bacteroides ovatus
CL03T12C18]
Length = 592
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++H G HL++NM + M V LE+ G R+ YLL+G + S H
Sbjct: 210 WRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELIGGRRMFVSYLLTGLCSAAFSLYMH-- 267
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
E +S GASG++FGL G L+ L+ + + L+ + + NL +G G+
Sbjct: 268 -GETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKALLTSILIFVGYNLVYGMKA---GI 323
Query: 211 DNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
DN AHIGG SG +LG I + GY EK
Sbjct: 324 DNAAHIGGLLSGFVLGIIYVV----GYKFEK 350
>gi|239502982|ref|ZP_04662292.1| hypothetical protein AbauAB_11789 [Acinetobacter baumannii AB900]
gi|421674977|ref|ZP_16114903.1| peptidase, S54 family [Acinetobacter baumannii OIFC065]
gi|421679834|ref|ZP_16119702.1| peptidase, S54 family [Acinetobacter baumannii OIFC111]
gi|421690873|ref|ZP_16130539.1| peptidase, S54 family [Acinetobacter baumannii IS-116]
gi|421786403|ref|ZP_16222806.1| peptidase, S54 family [Acinetobacter baumannii Naval-82]
gi|404563770|gb|EKA68970.1| peptidase, S54 family [Acinetobacter baumannii IS-116]
gi|410382992|gb|EKP35526.1| peptidase, S54 family [Acinetobacter baumannii OIFC065]
gi|410390653|gb|EKP43036.1| peptidase, S54 family [Acinetobacter baumannii OIFC111]
gi|410412881|gb|EKP64729.1| peptidase, S54 family [Acinetobacter baumannii Naval-82]
Length = 269
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 16/172 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ GL + + +
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFPPLPHQAYI 173
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
L ++A+NL FGF+ G++N AH+GG G LL I +L R Q+
Sbjct: 174 LDKKALLMIMAINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLSYRTQF 223
>gi|209876201|ref|XP_002139543.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555149|gb|EEA05194.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 273
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
++ L PS+ TL LI ++ Q +RLL S++LHA I H++ N+ + ++ E
Sbjct: 63 SWALSPSVPTLIKFQASVPKLI-KQGQIWRLLISLFLHASIWHIIFNIFFQLKLAISCED 121
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
++G +Y ++G G+L S IV+VGAS + FGL+GT L+ELI W I
Sbjct: 122 KYGRILCPSIYFITGIIGNLFSAAIR--NSCIVAVGASTSGFGLIGTQLAELILFWHIIQ 179
Query: 183 NKCTSL--SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
NK + +L ++ + + +G VD+ H GGF +G+ +G
Sbjct: 180 NKERVILNILLFGILMVLITWG--NPTSAVDHWGHTGGFLTGLAMG 223
>gi|237843485|ref|XP_002371040.1| rhomboid family domain-containing protein [Toxoplasma gondii ME49]
gi|50845220|gb|AAT84607.1| rhomboid protease 3 [Toxoplasma gondii]
gi|211968704|gb|EEB03900.1| rhomboid family domain-containing protein [Toxoplasma gondii ME49]
Length = 263
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH 148
Q +R+++ ++LHA I+HLV+N+ ++ +S RLE+ +G + Y LS G+LLS L
Sbjct: 82 QLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTKKFLVTYFLSAIVGNLLSMLMQ 141
Query: 149 KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVD 208
+SVGAS A FG++G M +E+ W + + + + I L + F+
Sbjct: 142 PWA---LSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYSMDICILAVLIY-FLSFGR 197
Query: 209 GVDNLAHIGGFASGVLL 225
VD H+GGF +GV L
Sbjct: 198 TVDTFGHLGGFLAGVAL 214
>gi|118467848|ref|YP_889287.1| rhomboid family protein [Mycobacterium smegmatis str. MC2 155]
gi|399989299|ref|YP_006569649.1| membrane protein in rhomboid family [Mycobacterium smegmatis str.
MC2 155]
gi|118169135|gb|ABK70031.1| rhomboid family protein [Mycobacterium smegmatis str. MC2 155]
gi|399233861|gb|AFP41354.1| Conserved membrane protein in rhomboid family [Mycobacterium
smegmatis str. MC2 155]
Length = 250
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
++ YRL++SM+LH G +HL+ NM +L +V LE+ G R LY LSG GGS+L ++
Sbjct: 75 DEYYRLVTSMFLHYGAMHLLFNMWALYVVGPPLEKWLGLTRFGVLYALSGLGGSVL--VY 132
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ GASGA+FGL G A + + + + +G ++ +NL F F+
Sbjct: 133 MLSPLNSATAGASGAIFGLFG-------AIFVVARHLNLDVRAIGVIVVINLVFTFVGPA 185
Query: 208 DG--VDNLAHIGGFASGVLLGFILFLRPQ 234
G + HIGG +G L+ P+
Sbjct: 186 LGTAISWQGHIGGLVTGALVASAFVYAPR 214
>gi|363740663|ref|XP_415618.3| PREDICTED: inactive rhomboid protein 2 [Gallus gallus]
Length = 812
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGIIH +V++T M V LE+ G+ RI+ +++LSG G+L S +
Sbjct: 608 DQIYRLWLSLFLHAGIIHCLVSVTFQMTVLRDLEKLAGWLRISIIFILSGITGNLASAIF 667
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + +L L ++ G +P
Sbjct: 668 LPYRAE---VGPAGSQFGLLACLFVELFQSWQVLEKPWKALLNLSGIVLFLFVCGLLP-- 722
Query: 208 DGVDNLAH 215
+DN+AH
Sbjct: 723 -WIDNIAH 729
>gi|299149420|ref|ZP_07042477.1| putative peptidase, S54 (rhomboid) family [Bacteroides sp. 3_1_23]
gi|298512607|gb|EFI36499.1| putative peptidase, S54 (rhomboid) family [Bacteroides sp. 3_1_23]
Length = 592
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++H G HL++NM + M V LE+ G R+ YLL+G + S H
Sbjct: 210 WRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELIGGRRMFVSYLLTGLCSAAFSLYMH-- 267
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
E +S GASG++FGL G L+ L+ + + L+ + + NL +G G+
Sbjct: 268 -GETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKALLTSILIFVGYNLVYGMKA---GI 323
Query: 211 DNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
DN AHIGG SG +LG I + GY EK
Sbjct: 324 DNAAHIGGLLSGFVLGIIYVV----GYKFEK 350
>gi|379021331|ref|YP_005297993.1| putative membrane peptidase, contains TPRrepeat domain
[Staphylococcus aureus subsp. aureus M013]
gi|418562599|ref|ZP_13127056.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21262]
gi|359830640|gb|AEV78618.1| Putative membrane peptidase, contains TPRrepeat domain
[Staphylococcus aureus subsp. aureus M013]
gi|371973703|gb|EHO91051.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21262]
Length = 487
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 177 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 235
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 236 IGSWRMLTVYFIAGLFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------MMYVS 286
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +I+L + G + ++ +AHIGGF G+L+ I
Sbjct: 287 KTFNKKMLGQLLISLVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|221484805|gb|EEE23099.1| peptidase S54 family protein [Toxoplasma gondii GT1]
Length = 263
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH 148
Q +R+++ ++LHA I+HLV+N+ ++ +S RLE+ +G + Y LS G+LLS L
Sbjct: 82 QLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTKKFLVTYFLSAIVGNLLSMLMQ 141
Query: 149 KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVD 208
+SVGAS A FG++G M +E+ W + + + + I L + F+
Sbjct: 142 PWA---LSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYSMDICILAVLIY-FLSFGR 197
Query: 209 GVDNLAHIGGFASGVLL 225
VD H+GGF +GV L
Sbjct: 198 TVDTFGHLGGFLAGVAL 214
>gi|74793159|sp|Q6IUY1.1|RHBL3_TOXGO RecName: Full=Rhomboid-like protease 3
gi|48093077|gb|AAT39987.1| rhomboid-like protease ROM3 [Toxoplasma gondii]
Length = 263
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH 148
Q +R+++ ++LHA I+HLV+N+ ++ +S RLE+ +G + Y LS G+LLS L
Sbjct: 82 QLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTKKFLVTYFLSAIVGNLLSMLMQ 141
Query: 149 KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVD 208
+SVGAS A FG++G M +E+ W + + + + I L + F+
Sbjct: 142 PWA---LSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYSMDICILAVLIY-FLSFGR 197
Query: 209 GVDNLAHIGGFASGVLL 225
VD H+GGF +GV L
Sbjct: 198 TVDTFGHLGGFLAGVAL 214
>gi|421661395|ref|ZP_16101571.1| peptidase, S54 family [Acinetobacter baumannii OIFC110]
gi|421694849|ref|ZP_16134466.1| peptidase, S54 family [Acinetobacter baumannii WC-692]
gi|421807457|ref|ZP_16243317.1| peptidase, S54 family [Acinetobacter baumannii OIFC035]
gi|404567084|gb|EKA72212.1| peptidase, S54 family [Acinetobacter baumannii WC-692]
gi|408715807|gb|EKL60929.1| peptidase, S54 family [Acinetobacter baumannii OIFC110]
gi|410416438|gb|EKP68210.1| peptidase, S54 family [Acinetobacter baumannii OIFC035]
Length = 269
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 16/172 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ GL + + +
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFPPLPHQAYI 173
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
L ++A+NL FGF+ G++N AH+GG G LL I +L R Q+
Sbjct: 174 LDKKALLMIMAINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLSYRTQF 223
>gi|445491442|ref|ZP_21459757.1| peptidase, S54 family [Acinetobacter baumannii AA-014]
gi|444764576|gb|ELW88889.1| peptidase, S54 family [Acinetobacter baumannii AA-014]
Length = 269
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 89/177 (50%), Gaps = 26/177 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSEL-----IANWTI 180
GSLLS L H + + VS GASGA+ G LG L+ L + +
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMG-LGAALTVLSLFPPLPHQAY 172
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
+K + L ++ A+NL FGF+ G++N AH+GG G LL I +L R Q+
Sbjct: 173 ILDKKSLLMIM----AINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLSYRTQF 223
>gi|373859031|ref|ZP_09601763.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
gi|372451122|gb|EHP24601.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
Length = 522
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 8/165 (4%)
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
G + ST G N ++ + Q +R L+ +++H G +HL++N +L + +E+ +G
Sbjct: 204 GSTNSTTLIKFGAKFNPLIIEGQWWRFLTPIFIHIGFLHLIMNSIALYYIGPLVERIYGN 263
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
R +YL +GF G L S +S GASGA+FG G +L + ++ +
Sbjct: 264 FRFILIYLFAGFTGVLASFAFSAN----LSAGASGAIFGCFGALLYFGLIYPKLFF-RTM 318
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
+++L VI LNLAFGF + G+DN HIGG G L IL+
Sbjct: 319 GMNIL-VVIGLNLAFGF--SMQGIDNAGHIGGLIGGFLASGILYF 360
>gi|358401351|gb|EHK50657.1| hypothetical protein TRIATDRAFT_52595 [Trichoderma atroviride IMI
206040]
Length = 510
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T + C L ++ G G + + G + N NQ +R +
Sbjct: 235 CPNATKSTQFCPLSELCG------------FGGDVPNPKFDG--NANQSPAPNQWFRFII 280
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
+++HAG+IH+ N+ + + +E G R +Y+ +G G ++ + I
Sbjct: 281 PIFMHAGLIHIGFNLLMQLTIGKEMEIAIGSIRFFLVYMSAGIFGFVMGG--NYAAPGIA 338
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG+LFG++ L +L+ +W + L + + ++ G +P G+DN +H
Sbjct: 339 STGASGSLFGIIALTLIDLLYSWKDRRSPVKDLLFIIIDMVISFVLGLLP---GLDNFSH 395
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF G++LG L P
Sbjct: 396 IGGFLMGLVLGICLLHSPN 414
>gi|293373190|ref|ZP_06619552.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CMC
3f]
gi|292631838|gb|EFF50454.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CMC
3f]
Length = 584
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++H G HL++NM + M V LE+ G R+ YLL+G + S H
Sbjct: 202 WRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELIGGRRMFVSYLLTGLCSAAFSLYMH-- 259
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
E +S GASG++FGL G L+ L+ + + L+ + + NL +G G+
Sbjct: 260 -GETISTGASGSIFGLYGIFLAFLLFHRIAKEQRKALLTSILIFVGYNLVYGM---KAGI 315
Query: 211 DNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
DN AHIGG SG +LG I + GY EK
Sbjct: 316 DNAAHIGGLLSGFVLGIIYVV----GYKFEK 342
>gi|58337771|ref|YP_194356.1| hypothetical protein LBA1506 [Lactobacillus acidophilus NCFM]
gi|58255088|gb|AAV43325.1| putative membrane protein [Lactobacillus acidophilus NCFM]
Length = 226
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 91/175 (52%), Gaps = 15/175 (8%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+++ L +G ++ +V +Q +RL ++ +LH G++HLV N + + +E G
Sbjct: 34 ENVNVLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYMEPIMGHT 93
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R YLL+G GG+L+S + +S GAS ALFGL G M + + N+ +
Sbjct: 94 RFLVTYLLAGIGGNLMSLAFSADRG--LSAGASTALFGLFGAMTAIGLRNF-----RNPM 146
Query: 188 LSVLGS---VIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
+S LG V+AL NLA F+P G+D HIGG +G LL IL R Y
Sbjct: 147 ISYLGRQALVLALINLALDIFVP---GIDIWGHIGGLIAGFLLAIILGDRVMKTY 198
>gi|86743118|ref|YP_483518.1| rhomboid-like protein [Frankia sp. CcI3]
gi|86569980|gb|ABD13789.1| Rhomboid-like protein [Frankia sp. CcI3]
Length = 275
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I +Q YRLL++ +LHAG++H++ NM +L L+ ++LE G AR L++ GG+ L
Sbjct: 107 IAADDQYYRLLTAAFLHAGVLHILFNMYALYLLGFQLEAILGRARYLALFVAGALGGNTL 166
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
S + G VSVGAS A+F + I + + L VLG +A+ +F
Sbjct: 167 S--YVLGDGFTVSVGASTAIFAFFA---AYYIIARRLRVDSRQILIVLGINLAITFSF-- 219
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
+D H+GG A G ++G I Y YV + +
Sbjct: 220 ----SNIDKWGHLGGLAVGAIIGLI------YAYVPPRRV 249
>gi|237723366|ref|ZP_04553847.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229447888|gb|EEO53679.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 584
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++H G HL++NM + M V LE+ G R+ YLL+G + S H
Sbjct: 202 WRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELIGGRRMFVSYLLTGLCSAAFSLYMH-- 259
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
E +S GASG++FGL G L+ L+ + + L+ + + NL +G G+
Sbjct: 260 -GETISTGASGSIFGLYGIFLAFLLFHRIAKEQRKALLTSILIFVGYNLVYGM---KAGI 315
Query: 211 DNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
DN AHIGG SG +LG I + GY EK
Sbjct: 316 DNAAHIGGLLSGFVLGIIYVV----GYKFEK 342
>gi|395238215|ref|ZP_10416153.1| Possible membrane protein [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477919|emb|CCI86130.1| Possible membrane protein [Lactobacillus gigeriorum CRBIP 24.85]
Length = 230
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 10/184 (5%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+ +TL LG ++ + Q +RL ++ +LH GI+HLV N + + LE G
Sbjct: 33 ENTATLIRLGAMNNYTVAAAGQWWRLFTAQFLHIGIMHLVSNAVMIYYLGMFLEPLLGHI 92
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YL+SG GG+LLS G +S GAS ALFGL G +++ + N T +
Sbjct: 93 RFLAVYLISGIGGNLLS--FALGDDRSISAGASTALFGLFGALIAVGVRNATSVEGSNSL 150
Query: 188 LSVLGS---VIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+S + V+AL N+ FIP +D H+GG +G +L IL R + ++
Sbjct: 151 ISYISRQAFVLALINIGLDLFIP---NIDLQGHLGGLFTGAMLTIILGNRATNKFSAKVR 207
Query: 243 IAAG 246
I +G
Sbjct: 208 IISG 211
>gi|418605748|ref|ZP_13169055.1| peptidase, S54 family [Staphylococcus epidermidis VCU041]
gi|420220495|ref|ZP_14725454.1| rhomboid family protein [Staphylococcus epidermidis NIH04008]
gi|420232065|ref|ZP_14736707.1| peptidase, S54 family [Staphylococcus epidermidis NIH051668]
gi|374401451|gb|EHQ72524.1| peptidase, S54 family [Staphylococcus epidermidis VCU041]
gi|394285848|gb|EJE29914.1| rhomboid family protein [Staphylococcus epidermidis NIH04008]
gi|394301787|gb|EJE45241.1| peptidase, S54 family [Staphylococcus epidermidis NIH051668]
Length = 486
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASG +FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 ---TISVGASGTIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 314 INIMAHLGGFISGVLITLI 332
>gi|421656542|ref|ZP_16096847.1| peptidase, S54 family [Acinetobacter baumannii Naval-72]
gi|408504869|gb|EKK06599.1| peptidase, S54 family [Acinetobacter baumannii Naval-72]
Length = 269
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 86/172 (50%), Gaps = 24/172 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSEL-----IANWTI 180
GSLLS L H + + VS GASGA+ G LG L+ L + +
Sbjct: 114 LFGSLLSSYINIQNGYELLQHFDQSLLPHVSAGASGAVMG-LGAALTVLSLFPPLPHQAY 172
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+K + L ++ A+NL FGF+ G++N AH+GG G LL I +L
Sbjct: 173 ILDKKSLLMIM----AINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLS 218
>gi|336417117|ref|ZP_08597446.1| hypothetical protein HMPREF1017_04554 [Bacteroides ovatus
3_8_47FAA]
gi|335936742|gb|EGM98660.1| hypothetical protein HMPREF1017_04554 [Bacteroides ovatus
3_8_47FAA]
Length = 592
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++H G HL++NM + M V LE+ G R+ YLL+G + S H
Sbjct: 210 WRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELIGGRRMFVSYLLTGLCSAAFSLYMH-- 267
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
E +S GASG++FGL G L+ L+ + + L+ + + NL +G G+
Sbjct: 268 -GETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKALLTSILIFVGYNLVYGMKA---GI 323
Query: 211 DNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
DN AHIGG SG +LG I + GY EK
Sbjct: 324 DNAAHIGGLLSGFVLGIIYVV----GYKFEK 350
>gi|428163351|gb|EKX32426.1| hypothetical protein GUITHDRAFT_166710 [Guillardia theta CCMP2712]
Length = 353
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
L + G ++IV + Q YRLL+ ++LH + H++VN SL + ++E+ FG R
Sbjct: 165 ALLEAGAKITSMIVYERQYYRLLTPIFLHGSLSHILVNCFSLNAIGPQVERYFGTERTVI 224
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
YLL+G G++ S + G K I SVGASGA+FGL+G + L + I+ ++ S +L
Sbjct: 225 TYLLAGIAGNVAS--FYFGPKLIPSVGASGAIFGLVGALGVFLARHQDIFGDR--SRYML 280
Query: 192 GSVIA---LNLAFGFIPGVDGVDN 212
+I LNL G PG + +DN
Sbjct: 281 NGIIQTCILNLIIGLAPGSN-IDN 303
>gi|385813424|ref|YP_005849817.1| S54 family peptidase [Lactobacillus helveticus H10]
gi|323466143|gb|ADX69830.1| S54 family peptidase [Lactobacillus helveticus H10]
Length = 226
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+ L +G ++ +V +Q +RL ++ +LH G++HLV N + + +E G
Sbjct: 34 ENINVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHV 93
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R YLL+G GG+L S + +S GAS ALFGL G M++ + N ++ +
Sbjct: 94 RFLVTYLLAGIGGNLFSLAFSSDRG--LSAGASTALFGLFGAMVAIGLRN--LHNPMISF 149
Query: 188 LSVLGSVIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFIL 229
L V+AL NLA F+P G+D HIGG +G LL IL
Sbjct: 150 LGRQALVLALINLALDIFVP---GIDIWGHIGGLITGFLLAIIL 190
>gi|169633923|ref|YP_001707659.1| hypothetical protein ABSDF2410 [Acinetobacter baumannii SDF]
gi|169152715|emb|CAP01721.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii]
Length = 269
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIIHLLLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ GL + + +
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFPPLPHQAYI 173
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
L ++A+NL FGF+ G++N AH+GG G LL I +L
Sbjct: 174 LDKKALLMIMAINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLS 218
>gi|160886529|ref|ZP_02067532.1| hypothetical protein BACOVA_04540 [Bacteroides ovatus ATCC 8483]
gi|423289697|ref|ZP_17268547.1| hypothetical protein HMPREF1069_03590 [Bacteroides ovatus
CL02T12C04]
gi|156108414|gb|EDO10159.1| peptidase, S54 family [Bacteroides ovatus ATCC 8483]
gi|392667408|gb|EIY60918.1| hypothetical protein HMPREF1069_03590 [Bacteroides ovatus
CL02T12C04]
Length = 592
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++ ++H G HL++NM + M V LE+ G R+ YLL+G + S H
Sbjct: 210 WRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELIGGRRMFVSYLLTGLCSAAFSLYMH-- 267
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
E +S GASG++FGL G L+ L+ + + L+ + + NL +G G+
Sbjct: 268 -GETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKALLASILIFVGYNLVYGMKA---GI 323
Query: 211 DNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
DN AHIGG SG +LG I + GY EK
Sbjct: 324 DNAAHIGGLLSGFVLGIIYVV----GYKFEK 350
>gi|336114379|ref|YP_004569146.1| rhomboid family protein [Bacillus coagulans 2-6]
gi|335367809|gb|AEH53760.1| Rhomboid family protein [Bacillus coagulans 2-6]
Length = 355
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + Q +RL+ +++H GI+HL +N SL + +E+ +G AR A +YL +G
Sbjct: 179 GAKYNPLIMEGQYWRLIMPVFIHIGIMHLFMNSLSLYYIGPLVERIYGKARFALIYLFAG 238
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
F G L S L +S GASGA+FGL G +L A ++ S SV+ ++I +
Sbjct: 239 FTGCLASFLFSPS----LSAGASGAIFGLFGALLYIGTAYRDLFFRTMGS-SVI-TLIII 292
Query: 198 NLAFGFIPGVDGVDN 212
NL FGF V G+DN
Sbjct: 293 NLVFGF--SVSGIDN 305
>gi|403673746|ref|ZP_10936036.1| hypothetical protein ANCT1_03661 [Acinetobacter sp. NCTC 10304]
Length = 269
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 88/177 (49%), Gaps = 26/177 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H G IHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGFIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ G LG L+ L +++ +
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMG-LGAALTVL----SLFPPQP 168
Query: 186 TSLSVLGS-----VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
+L ++A+NL FGF+ G++N AH+GG G LL I +L R Q+
Sbjct: 169 HQAYILDKKSLLMIMAINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLSYRTQF 223
>gi|229816943|ref|ZP_04447225.1| hypothetical protein BIFANG_02194 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785688|gb|EEP21802.1| hypothetical protein BIFANG_02194 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 239
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRL 120
YL+ P + + + G + L+V++ + L+SM+LHA ++H++ NM +L V L
Sbjct: 40 ARYLMPPVFAAIVNWGMVAPVLMVQRPWTW--LTSMFLHAPSVLHILFNMLALWSVGPML 97
Query: 121 EQEFGFARIAPLYLLSGFGGS--LLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
E+ G R YL+SGFGG+ L+ G + GASGALFGL ML
Sbjct: 98 ERMLGHWRFLAFYLISGFGGAAGLMVWARLTGDWGTAAYGASGALFGLFAAML------- 150
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
++ + + +A+N A F+ G G+ AH+GGF +G +L +L
Sbjct: 151 VVFRRVGADIRSMLVWMAVNFAMPFVMG--GIAWQAHVGGFVTGGVLAALL 199
>gi|345007980|ref|YP_004810334.1| rhomboid family protein [Streptomyces violaceusniger Tu 4113]
gi|344034329|gb|AEM80054.1| Rhomboid family protein [Streptomyces violaceusniger Tu 4113]
Length = 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + Q +RL++S++LH +IH+ NM SL + LE G R LY+LSG GGS LS
Sbjct: 125 VAEGQWWRLVTSIFLHQQLIHIAFNMLSLWWIGGPLEAALGRVRFIVLYILSGLGGSALS 184
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L + S+GASGA+FGLLG A + + + +++ALNL F F
Sbjct: 185 YLLAAQNQP--SLGASGAIFGLLG-------ATAVLMRRLNYDMRPVIALLALNLLFTFT 235
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G+ AH+GG +G ++ + + P+
Sbjct: 236 --WSGIAWQAHVGGLVAGTVVAYGMVHAPR 263
>gi|221504981|gb|EEE30646.1| rhomboid, putative [Toxoplasma gondii VEG]
Length = 263
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH 148
Q +R+++ ++LHA I+HLV+N+ ++ +S RLE+ +G + Y LS G+LLS L
Sbjct: 82 QLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTKKFLVTYFLSAIVGNLLSMLMQ 141
Query: 149 KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVD 208
+SVGAS A FG++G M +E+ W + + + + I L + F+
Sbjct: 142 PWA---LSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYSMDICILAVLIY-FLSFGR 197
Query: 209 GVDNLAHIGGFASGVLL 225
VD H+GGF +GV L
Sbjct: 198 TVDTFGHLGGFLAGVAL 214
>gi|443731516|gb|ELU16621.1| hypothetical protein CAPTEDRAFT_101212 [Capitella teleta]
Length = 466
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 13/172 (7%)
Query: 62 ENYLLGPSISTLRDLGGLDRNL-IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
EN L + + ++ G+ L R +Q YRL S+++HAG+ L++++ + L
Sbjct: 230 ENASLCSQVQCMNEICGMIPFLEPSRPDQFYRLWLSLFVHAGLFQLIISVLFQFFMMRDL 289
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCL---HHKGKKEIVSVGASGALFGLLGTMLSELIAN 177
E+ G+ RIA +YL SG GSL S + +H V G +GA FGLL ++ E++ N
Sbjct: 290 EKLAGWLRIAIIYLGSGVAGSLSSAIFLPYH------VEAGPAGAQFGLLACLVVEILHN 343
Query: 178 WTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
W I A+ ++ L +I + G +P +DN AH+ G G LL F L
Sbjct: 344 WYILASPWWAMGKLIVIIIVLFIVGLLP---FIDNYAHLIGLVFGFLLSFSL 392
>gi|337282820|ref|YP_004622291.1| rhomboid family protein [Streptococcus parasanguinis ATCC 15912]
gi|335370413|gb|AEH56363.1| rhomboid family protein [Streptococcus parasanguinis ATCC 15912]
Length = 225
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V +Q +R++++ ++H G+ H V+NM +L + E FG LYLLSG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
+ ++++ GAS ALFGL GT+ + + Y + S+I +NL F F+
Sbjct: 113 AIF---TPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYT--SLIVVNLIFSFM 167
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
P G+ HIGG +GV+L ++ +R + +++ Y
Sbjct: 168 P---GISMSGHIGGLVAGVMLAYVFPVRGEARFMNRTY 202
>gi|420216660|ref|ZP_14721861.1| rhomboid family protein, partial [Staphylococcus epidermidis
NIH05001]
gi|394291537|gb|EJE35341.1| rhomboid family protein, partial [Staphylococcus epidermidis
NIH05001]
Length = 326
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 43 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 102
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 103 T---ISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSLFMSN 153
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF SGVL+ I
Sbjct: 154 INIMAHLGGFISGVLITLI 172
>gi|295425277|ref|ZP_06817980.1| rhomboid protease GluP [Lactobacillus amylolyticus DSM 11664]
gi|295065053|gb|EFG55958.1| rhomboid protease GluP [Lactobacillus amylolyticus DSM 11664]
Length = 226
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 26/197 (13%)
Query: 62 ENYLLGP-SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E ++ G + +TL LG ++ +V +Q +RL+++ +LH GI HLV N+ + + +
Sbjct: 27 ETFMGGSENTATLVKLGAMNNYAVVAGHQWWRLITAQFLHIGIWHLVSNIVMIYYMGLII 86
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELI---AN 177
E G R +YLLSG GG+LLS G + + GAS ALFGL G +++ I AN
Sbjct: 87 EPMLGHWRFLLIYLLSGVGGNLLSLAF--GSDKSIGAGASTALFGLFGAVIALGIRHRAN 144
Query: 178 WTI--YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
+ + L+VL +I + F+P +D HIGG SG LL +
Sbjct: 145 PVVAYVGRQALVLAVLNLIIDI-----FLP---NIDIYGHIGGLISGFLLAMM------- 189
Query: 236 GYVSEKYIAAGYDAKHR 252
S + GY+ K R
Sbjct: 190 ---SGDRLGKGYNTKLR 203
>gi|387880413|ref|YP_006310716.1| rhomboid family membrane protein [Streptococcus parasanguinis
FW213]
gi|386793861|gb|AFJ26896.1| rhomboid family membrane protein [Streptococcus parasanguinis
FW213]
Length = 225
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V +Q +R++++ ++H G+ H V+NM +L + E FG LYLLSG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
+ ++++ GAS ALFGL GT+ + + Y + S+I +NL F F+
Sbjct: 113 AIF---TPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYT--SLIVVNLIFSFM 167
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
P G+ HIGG +GV+L ++ +R + +++ Y
Sbjct: 168 P---GISMSGHIGGLVAGVMLAYVFPVRGEARFMNRTY 202
>gi|70726368|ref|YP_253282.1| hypothetical protein SH1367 [Staphylococcus haemolyticus JCSC1435]
gi|68447092|dbj|BAE04676.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 485
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 41/214 (19%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L DLGGL +V + YRL++SM+LH H+++NM SL + +E
Sbjct: 176 YLNHFSDVKLLDLGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVESI 234
Query: 124 FGFARIAPLYLLSGFGGSLLSC---LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
G R+ +Y++SG G+ +S LH VSVGASGA+FGL+G++ + +
Sbjct: 235 VGPLRMLGIYVISGLLGNFISLSFNLH------TVSVGASGAIFGLIGSIFA------MM 282
Query: 181 YANKCTSLSVLGSVIALNLAFGFIP-GVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
+ +K S +G ++ L + + ++ +AH+GGF GVL+ I GY
Sbjct: 283 FVSKTYSKKTIGQMLIALLVLIVLSLFMSNINIMAHLGGFIGGVLITLI-------GYY- 334
Query: 240 EKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVL 273
+ H + L WI +ILLVL
Sbjct: 335 ----------------FTHNRNLFWIFLIILLVL 352
>gi|407796208|ref|ZP_11143164.1| S54 family peptidase [Salimicrobium sp. MJ3]
gi|407019562|gb|EKE32278.1| S54 family peptidase [Salimicrobium sp. MJ3]
Length = 507
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 21/162 (12%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
SISTL + G N + + + +RL+SSM+LH G++HL++NM +L + +EQ +G R
Sbjct: 206 SISTLIEYGA-KYNPGIIEGEWWRLISSMFLHIGVLHLLMNMLALFYLGTAVEQIYGSFR 264
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+Y L+G GS S + V+ GASGA+FGL G +L +A + SL
Sbjct: 265 FTMIYFLAGILGSAASFYFNTS----VAAGASGAIFGLFGALL--------YFAWRYPSL 312
Query: 189 --SVLG----SVIALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
+G ++A+N+ FG V VDN H+GG G L
Sbjct: 313 FFRTMGWNLIILVAINIVFGIT--VPQVDNSGHMGGLIGGFL 352
>gi|445059551|ref|YP_007384955.1| hypothetical protein A284_05970 [Staphylococcus warneri SG1]
gi|443425608|gb|AGC90511.1| hypothetical protein A284_05970 [Staphylococcus warneri SG1]
Length = 484
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L D+GGL +V + YRL++SM+LH H+++NM SL + +E G ++ +
Sbjct: 186 LLDVGGLVHFNVVH-GEWYRLVTSMFLHFNFEHILMNMLSLYIFGKIVESVLGSWKMLAI 244
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
YL +G G+ +S + +SVGASGA+FGL+G++ + +Y +K V+G
Sbjct: 245 YLFAGIFGNFVSLSFNTT---TISVGASGAIFGLIGSIFA------ILYLSKTFDKRVIG 295
Query: 193 S-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
+IAL + G + ++ +AH+GGF G+L+ I
Sbjct: 296 QLLIALVILIGLSLFMSNINVMAHLGGFIGGLLITLI 332
>gi|403514649|ref|YP_006655469.1| S54 family peptidase [Lactobacillus helveticus R0052]
gi|403080087|gb|AFR21665.1| S54 family peptidase [Lactobacillus helveticus R0052]
Length = 226
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+I+ L +G ++ +V +Q +RL ++ +LH G++HLV N + + +E G
Sbjct: 34 ENINVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHV 93
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R YLL+G GG+L S + +S GAS ALFGL G M++ + N ++ +
Sbjct: 94 RFLVTYLLAGIGGNLFSLAFSSDRG--LSAGASTALFGLFGAMVAIGLRN--LHNPMISF 149
Query: 188 LSVLGSVIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFIL 229
L V+AL NLA F+P G+D HIGG +G LL IL
Sbjct: 150 LGRQALVLALINLALDIFVP---GIDIWGHIGGLITGFLLAIIL 190
>gi|391344354|ref|XP_003746466.1| PREDICTED: inactive rhomboid protein 1-like [Metaseiulus
occidentalis]
Length = 692
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 17/188 (9%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRLL+S++LHAG++H + M + LE+ +G RI +Y++SG GG+L S +
Sbjct: 473 DQIYRLLTSLFLHAGLLHFALTAIVQMWLMRDLERIYGPHRIGAIYMMSGIGGNLASAIF 532
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWT--IYANKCTSLSVLGSVIALNLAFGFIP 205
+ + VG S ALFG++ ++EL+ W + + T +VL I + + G P
Sbjct: 533 VPYRAD---VGPSAALFGIMAIFIAELVKLWDRLLDRKRATLHAVLP--ILIGIVCGLTP 587
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWI 265
DN H+ G+++GF+L + P + SEK A +++ + + ++ C
Sbjct: 588 ---WTDNFGHL----FGLIIGFVLAMVP---HNSEKQNADLDESQMIEYRRKARRRWCLC 637
Query: 266 IALILLVL 273
A +++V
Sbjct: 638 AASLVIVF 645
>gi|117927224|ref|YP_871775.1| rhomboid family protein [Acidothermus cellulolyticus 11B]
gi|117647687|gb|ABK51789.1| Rhomboid family protein [Acidothermus cellulolyticus 11B]
Length = 287
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 13/139 (9%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + YRL+++M+LHA ++H+V NM +L++V LE G R LY L+G GGS +
Sbjct: 118 VAGGEFYRLITAMFLHASVLHIVFNMWALLVVGAPLEALLGRLRFLVLYFLAGLGGS--T 175
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT-SLSVLGSVIALNLAFGF 203
++ + ++GASGA+FGL + ++ + + +G VI +NLA F
Sbjct: 176 AVYLFAPRGSATLGASGAIFGLFAALF--------VFGRRLNFDIRPIGLVIVINLALTF 227
Query: 204 IPGVDGVDNLAHIGGFASG 222
+ + GV HIGG SG
Sbjct: 228 V--LSGVSWQGHIGGLLSG 244
>gi|260439384|ref|ZP_05793200.1| rhomboid family protein [Butyrivibrio crossotus DSM 2876]
gi|292808180|gb|EFF67385.1| rhomboid family protein [Butyrivibrio crossotus DSM 2876]
Length = 337
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
GGL ++ + YRL +SM+LHAG+ HL NM L+ V +E+ G R A +YL
Sbjct: 180 GGLVAKYVIDYKEYYRLFTSMFLHAGVQHLASNMIMLLFVGDTIERIVGHVRYAIIYLAG 239
Query: 137 GFGGSLLSCLHHKG-KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
G S+ + L+++ +GASGA+F ++G ++ LI N + S++ I
Sbjct: 240 GLFASVGTLLYYRTYDMYACCIGASGAIFAVMGALIYILICNR----GRTEGFSIV--RI 293
Query: 196 ALNLAFGFIPGV--DGVDNLAHIGGFASGVLLGFILFLRP 233
L +A+ G+ G N AHI G G+L+ I + +
Sbjct: 294 ILFVAYAIYSGLTTQGTCNAAHIAGLLGGLLITAICYRKK 333
>gi|374297549|ref|YP_005047740.1| hypothetical protein [Clostridium clariflavum DSM 19732]
gi|359827043|gb|AEV69816.1| putative membrane protein [Clostridium clariflavum DSM 19732]
Length = 517
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
Query: 67 GPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGF 126
G ++ +L G N ++ + +R L+ ++LHA + HL++N SL + +E +G
Sbjct: 209 GTNVQSLFIPFGAKENSLIFAGEYWRFLTPIFLHADLEHLIMNCLSLFVFGRIVEGMYGH 268
Query: 127 ARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT 186
+ +Y ++G GS+ S + +VGASGA+FGL+G +L + N ++ K
Sbjct: 269 KKFVFIYFMAGIMGSIASFMFSPHS----AVGASGAIFGLMGALLYFSVENPALFK-KYF 323
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
S+L VI +NL +GFI G+DN HIGG G L
Sbjct: 324 GNSILLMVI-INLVYGFIR--PGIDNYGHIGGLIGGFL 358
>gi|145596990|ref|YP_001161287.1| rhomboid family protein [Salinispora tropica CNB-440]
gi|145306327|gb|ABP56909.1| Rhomboid family protein [Salinispora tropica CNB-440]
Length = 303
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ Q YRL+++M+LH G+IHL++NM +L ++ LE G AR LYL++G GG++ +
Sbjct: 134 IADGQWYRLVTAMFLHYGVIHLLLNMYALWILGRTLEASLGPARFLALYLVAGLGGNVAA 193
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L + GAS A+FGL + + + +S + ++ +NL F
Sbjct: 194 YLIS--APNAATAGASTAIFGLFAAL-------FVVGRRMGRDVSQVLPILVINLVFTLT 244
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
V G+ H+GG A G L+ F+L P+
Sbjct: 245 --VPGISIPGHLGGLAVGGLMAFVLAYAPR 272
>gi|427390838|ref|ZP_18885244.1| hypothetical protein HMPREF9233_00747 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732574|gb|EKU95382.1| hypothetical protein HMPREF9233_00747 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 221
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 19/195 (9%)
Query: 49 RDILGRYSFQPWKENYLLGPSIST-LRDL--GGLDRNLI----VRKNQKYRLLSSMWLHA 101
+ + R +++PW L+ +I L ++ GL + L+ + ++Q YR +SS + H+
Sbjct: 4 QSVTERRAYRPWATVALIAINIGVYLVEMVWSGLSQALLFAPGIAEDQPYRFISSAFAHS 63
Query: 102 GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS---LLSCLHHKGKKEIVSVG 158
G HL+ NM +L L+ LE+ G R LY L+ GG+ LL+ VG
Sbjct: 64 GFWHLIFNMYALWLMGMFLERAIGRWRFVMLYALAAIGGNVFVLLTASEDTMGWWTGVVG 123
Query: 159 ASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGG 218
ASGA+FGL G + + + N L ++G +NL GF+PG++ + +H+GG
Sbjct: 124 ASGAVFGLFGAL---FVVQRHLGRNDVQLLVIIG----INLVIGFMPGMN-ISWQSHVGG 175
Query: 219 FASGVLLGFILFLRP 233
G +L LRP
Sbjct: 176 LIVGAIL-MAATLRP 189
>gi|319651546|ref|ZP_08005673.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
gi|317396613|gb|EFV77324.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
Length = 506
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +R L+ + LH G++HL++N +L + +E+ +G R +YL +G
Sbjct: 212 GAKFNPLILDGEWWRFLTPIVLHIGLLHLLMNTLALFYLGSAVERVYGNLRFLFIYLAAG 271
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
FGG+L S + +S GASGA+FG G +L + +++ + +++ V+ +
Sbjct: 272 FGGTLASFIF----SPTLSAGASGAIFGCFGALLYFGLIYPSLFF-RTIGFNII-VVLGI 325
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVL-LGFILFLRPQYGYVSEKYIAAGY 247
NLAFGF + G+DN HIGG G L G + F + + + ++AA +
Sbjct: 326 NLAFGFT--IPGIDNAGHIGGLIGGFLATGIVHFPKKKRPLLQFLFLAASF 374
>gi|297584599|ref|YP_003700379.1| rhomboid protease [Bacillus selenitireducens MLS10]
gi|297143056|gb|ADH99813.1| Rhomboid protease [Bacillus selenitireducens MLS10]
Length = 526
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 8/139 (5%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R +S+M++H G +HL +N +L + +E+ FG R +Y L+G GS+ S + +
Sbjct: 236 WRFVSAMFIHIGPLHLFMNSLALFFLGAAVERIFGTGRFFGIYFLAGLFGSVASFVFNDN 295
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGV 210
+S GASGA+FGL G +L + + ++ + +++L ++ +NL FGF+ V V
Sbjct: 296 ----ISAGASGAIFGLFGALLYFGVRHKKLFF-RTMGMNIL-VILGINLVFGFV--VPMV 347
Query: 211 DNLAHIGGFASGVLLGFIL 229
DN AHIGG G + I+
Sbjct: 348 DNGAHIGGLIGGFIASSIV 366
>gi|402594966|gb|EJW88892.1| hypothetical protein WUBG_00197 [Wuchereria bancrofti]
Length = 983
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIV-RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
EN L +S L ++ G+ L R +Q YRL ++LHAGIIH ++ + +L L
Sbjct: 748 ENATLCSQVSCLSEICGMLPFLRKDRPDQWYRLFIPLFLHAGIIHCILTVFIQILYMRDL 807
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E+ G+AR+A LY++SG GG L + + E VG +G+ G+ M +++ +W +
Sbjct: 808 EKLLGWARVALLYMVSGIGGYLAGAIFVPYRPE---VGPAGSHVGMFAAMYVDVLYSWNL 864
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
++ L A G +P VDN AH+ GF G+L+
Sbjct: 865 LERPWHAVVQLSLFTLALFAIGTLP---WVDNWAHLFGFIFGILIS 907
>gi|289550680|ref|YP_003471584.1| membrane peptidase [Staphylococcus lugdunensis HKU09-01]
gi|385784306|ref|YP_005760479.1| rhomboid family protein [Staphylococcus lugdunensis N920143]
gi|418413982|ref|ZP_12987198.1| hypothetical protein HMPREF9308_00363 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180212|gb|ADC87457.1| Putative membrane peptidase [Staphylococcus lugdunensis HKU09-01]
gi|339894562|emb|CCB53844.1| rhomboid family protein [Staphylococcus lugdunensis N920143]
gi|410877620|gb|EKS25512.1| hypothetical protein HMPREF9308_00363 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 485
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 11/157 (7%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L D+GGL +V + YRL++SM+LH H+++NM SL + +E G ++ L
Sbjct: 185 LLDMGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMKMLIL 243
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y++SG G+ LS + + VS GASGA+FGL+G +++ + +K S ++G
Sbjct: 244 YIISGLFGNFLSLSFN---TDTVSAGASGAIFGLIGAIIA------MMIISKVYSRKMIG 294
Query: 193 S-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
+IAL + GF + V+ +AH+GGF SG+LL +I
Sbjct: 295 QLLIALVILIGFSLLLSNVNIMAHLGGFISGLLLIYI 331
>gi|146181679|ref|XP_001023246.2| Rhomboid family protein [Tetrahymena thermophila]
gi|146144109|gb|EAS03001.2| Rhomboid family protein [Tetrahymena thermophila SB210]
Length = 324
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R ++LH G H++ N L ++ LE++FGF + LY+LSG GG+L S +
Sbjct: 126 HRYFVPIYLHGGFPHIISNTFGLFFYAFTLEKQFGFKKFVLLYILSGLGGNLFSGYN--- 182
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDG- 209
+ E +SVGAS +LFGL M+ LI N + N+ V ++ FG D
Sbjct: 183 QPEQMSVGASSSLFGLFPLMILFLIENQDMNKNQKLFYVVYILIMIFANFFGSSSSPDQG 242
Query: 210 -------------VDNLAHIGGFASGVLLGFI 228
+D AH+GGF +G+ + I
Sbjct: 243 QKKDNQDESDVRIIDTAAHLGGFLTGLCITII 274
>gi|429764176|ref|ZP_19296501.1| peptidase, S54 family [Clostridium celatum DSM 1785]
gi|429188574|gb|EKY29452.1| peptidase, S54 family [Clostridium celatum DSM 1785]
Length = 324
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ Q +RL++ +LH G+ H+ NM +L ++ +E +G + +YL S
Sbjct: 173 GAKVNELINHGQVWRLITCTFLHGGLAHIAFNMYALKIIGSEVEFAYGKIKYILIYLFSA 232
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW-TIYANKCTSLSVLGSVIA 196
GGS+ S + +SVGASGA+FGL G ML + N I N +L V+
Sbjct: 233 LGGSIFSYIFSPNS---ISVGASGAIFGLFGAMLVFGVKNRHRIGKNYVINLF---KVVI 286
Query: 197 LNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+N+ G + +DN HIGG +G ++ ++
Sbjct: 287 INIFIGVT--ISNIDNAGHIGGLVAGGIIALLV 317
>gi|18310434|ref|NP_562368.1| rhomboid family protein [Clostridium perfringens str. 13]
gi|18145114|dbj|BAB81158.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 342
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+G N I+ + YRL++SM+LH GI+HL+ NM +L ++ +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 136 SGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
SG S+ S ++ VGASGA+FGLLG L N K +++ +I
Sbjct: 249 SGIVASIFSLYF----SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNII-VII 302
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
LN+ G + +D A GGF +G +LG
Sbjct: 303 LLNVFIGL--SMSNIDISARFGGFIAGAILG 331
>gi|418886814|ref|ZP_13440962.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377725767|gb|EHT49880.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1150]
Length = 314
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
YL S L D+GGL +V + YR+++SM+LH H+++NM SL + +E
Sbjct: 4 YLNNFSDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAI 62
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +Y ++G G+ +S + +SVGASGA+FGL+G++ + +Y +
Sbjct: 63 IGSWRMLTVYFIAGLFGNFVSLSFN---TTTISVGASGAIFGLIGSIFA------MMYVS 113
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI 228
K + +LG +IAL + G + ++ +AHIGGF G+L+ I
Sbjct: 114 KTFNKKMLGQLLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 159
>gi|452845449|gb|EME47382.1| hypothetical protein DOTSEDRAFT_166397 [Dothistroma septosporum
NZE10]
Length = 505
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 35 NCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLL 94
N A T D C L D+ G + + P ++ G LD+ +Q +R +
Sbjct: 202 NATATTGDGVSCQLSDLCGFSADR--------NPVVN-----GSLDQK--PEPDQWWRFI 246
Query: 95 SSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEI 154
++LHAGIIH+ N+ M + +E + G R A LY SG G +L + I
Sbjct: 247 VPIFLHAGIIHIGFNLLLQMTLGRDVELQIGSIRFAILYFASGIFGFVLGG--NFAATGI 304
Query: 155 VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLA 214
S G SG+LFG+L L +L+ +W + L + + + G +P G+DN +
Sbjct: 305 ASTGCSGSLFGILALTLLDLLYHWRERNSPIKDLLFILVDVIIAFVLGLLP---GLDNFS 361
Query: 215 HIGGFASGVLLGFILFLRPQ 234
HIGGF G++LG L P
Sbjct: 362 HIGGFLMGLVLGVFLLRSPH 381
>gi|154305263|ref|XP_001553034.1| hypothetical protein BC1G_08926 [Botryotinia fuckeliana B05.10]
Length = 547
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
SIS L GG+ +Q YR + M+LHAGIIH+ NM M + +E G R
Sbjct: 271 SISDLCGFGGVG----ATPDQWYRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIR 326
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+Y+ SG G +L + I S GASGALFGL+ L +L+ W + L
Sbjct: 327 YFLVYISSGIFGFILGG--NFAATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKEL 384
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ + I ++ G +P G+DN +HIGGF G++LG + P
Sbjct: 385 AFIMLDIVISFVLGLLP---GLDNFSHIGGFLMGLVLGLSILRSPN 427
>gi|309808584|ref|ZP_07702478.1| peptidase, S54 family [Lactobacillus iners LactinV 01V1-a]
gi|308168180|gb|EFO70304.1| peptidase, S54 family [Lactobacillus iners LactinV 01V1-a]
Length = 182
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+V K Q +RL ++ ++HAG H++ N+ + LEQ G R +YLLSG GG+LL
Sbjct: 6 VVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTIYLLSGVGGNLL 65
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
S G+ ++S GAS A+FGL+G++L+ N +I + F
Sbjct: 66 S--FALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLLICNIVVDFF 123
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFIL 229
+P VD + HIGG +G LL IL
Sbjct: 124 MPSVDII---GHIGGTITGFLLTIIL 146
>gi|256072025|ref|XP_002572338.1| RHBDF1 protein (S54 family) [Schistosoma mansoni]
Length = 471
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
NQ YR+ +S++LHAG++HL++ + M+ LE+ G+ RI +Y+LSG GSL S +
Sbjct: 343 NQMYRIFTSLFLHAGVLHLILTLGVQMIFMRDLEKMIGWHRITLVYILSGCIGSLTSGIF 402
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ V G +GA F LLG L +LI W A+ +L ++ + FG +P
Sbjct: 403 LPYQ---VETGPTGAQFALLGISLVDLIHCWQFLAHPWYALLRNILLVFILFTFGLLP-- 457
Query: 208 DGVDNLAHIGGFASG 222
+DN A+ G F S
Sbjct: 458 -WIDNYANAGSFLSA 471
>gi|262368785|ref|ZP_06062114.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|381197595|ref|ZP_09904935.1| hypothetical protein AlwoW_10058 [Acinetobacter lwoffii WJ10621]
gi|262316463|gb|EEY97501.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 271
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 24/175 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + + RLLSSM+ H G++HL++NM +L + LEQ FG LY+L+G
Sbjct: 54 GADYAPLTFLAEPMRLLSSMFFHFGLVHLMLNMWALYIFGSVLEQMFGRVYFLALYVLAG 113
Query: 138 FGGSLLSC-LHHKGKKEIVSV-------------GASGALFGLLGTM----LSELIANWT 179
GSLLS + + E++ V GASGA+ GL + L ++
Sbjct: 114 LMGSLLSGYIAIQDSYELIRVGLANPELLPRVGAGASGAVMGLGAALTVLSLLPMLPQQR 173
Query: 180 IYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+K T L V+G +NLA GF+ + G++N AHIGG G +L + +L +
Sbjct: 174 FILDKKTLLIVMG----INLAMGFM--ISGINNAAHIGGMLMGAVLAALWYLSQK 222
>gi|345857374|ref|ZP_08809813.1| rhomboid family protein [Desulfosporosinus sp. OT]
gi|344329492|gb|EGW40831.1| rhomboid family protein [Desulfosporosinus sp. OT]
Length = 328
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N +++ + +RLL+S+++H GIIHL N+ +L + E+ FG + +Y+ SG
Sbjct: 175 GAKVNDLIQAGEVWRLLTSIFIHIGIIHLAFNLYALRALGPLTEEFFGHPKFLMIYMFSG 234
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GGS+ S L +S GASGA+FGLLG +L I ++ + + V+ +
Sbjct: 235 LGGSIASYLFSPA----LSAGASGAIFGLLGALLYYCIKRPYLWKSGLG----MNLVVVI 286
Query: 198 NLAFGFIPGVDGVDNLAH 215
+ FGF G+DN AH
Sbjct: 287 LVNFGFGISQPGIDNYAH 304
>gi|347826752|emb|CCD42449.1| similar to rhomboid family membrane protein [Botryotinia
fuckeliana]
Length = 547
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
SIS L GG+ +Q YR + M+LHAGIIH+ NM M + +E G R
Sbjct: 271 SISDLCGFGGVG----ATPDQWYRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIR 326
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+Y+ SG G +L + I S GASGALFGL+ L +L+ W + L
Sbjct: 327 YFLVYISSGIFGFILGG--NFAATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKEL 384
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ + I ++ G +P G+DN +HIGGF G++LG + P
Sbjct: 385 AFIMLDIVISFVLGLLP---GLDNFSHIGGFLMGLVLGLSILRSPN 427
>gi|366089319|ref|ZP_09455792.1| membrane-associated serine protease [Lactobacillus acidipiscis KCTC
13900]
Length = 217
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 13/154 (8%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + +RL + M++H G+ H+V+NM +L + ++E FG R LYL+SG
Sbjct: 40 GAKVNQLIGQGEWWRLFTPMFIHIGLQHIVLNMVTLYFIGIQIEAVFGKWRFVILYLISG 99
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGT--MLSELIANWTIYANKCTSLSVLGSVI 195
GG++ S + +S GAS ++FGL G ML E +L +
Sbjct: 100 LGGNIASFVFSPS----ISAGASTSIFGLFGAFLMLGESYRQNPYIRATAKQFLIL---V 152
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
LNL GF G+D HIGG +G L ++L
Sbjct: 153 ILNLGLGF----TGIDIAGHIGGLLAGFLTAYVL 182
>gi|302559651|ref|ZP_07311993.1| rhomboid family protein [Streptomyces griseoflavus Tu4000]
gi|302477269|gb|EFL40362.1| rhomboid family protein [Streptomyces griseoflavus Tu4000]
Length = 295
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + + YRL +SM+ H I H+ NM SL + LEQ G R LYL+SG G L+
Sbjct: 127 VAEGEWYRLFTSMFTHQEIWHIAFNMLSLWWLGGPLEQALGRVRYLTLYLISGLAGGALT 186
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L G S+GASGA+FGL G A + + + +++ +NL F F
Sbjct: 187 YLLASGTT--ASLGASGAIFGLFG-------ATAVLMRRLNYDMRPVIALLVINLIFTF- 236
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
G + AHIGG +GV++G+ + P+
Sbjct: 237 -GWSNIAWQAHIGGLVAGVVIGYAMVHAPR 265
>gi|334182855|ref|NP_001185093.1| RHOMBOID-like protein 10 [Arabidopsis thaliana]
gi|332192482|gb|AEE30603.1| RHOMBOID-like protein 10 [Arabidopsis thaliana]
Length = 336
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + Q +RL ++ LHA +HL++N SL + E G R +YL S
Sbjct: 155 GAKINSLIERGQLWRLATASVLHANPMHLMINCYSLNSIGPTAESLGGPKRFLAVYLTSA 214
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
S +S +K SVGASGA+FGL+G++ +I + + L + +IAL
Sbjct: 215 VASSAMSYWFNKAP----SVGASGAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIAL 270
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
N+A G + +DN HIGG G + ++L + +Y Y +
Sbjct: 271 NMAMGLMS--RRIDNWGHIGGLLGGTAMTWLLGPQWKYEYTTRD 312
>gi|410728950|ref|ZP_11367038.1| putative membrane protein [Clostridium sp. Maddingley MBC34-26]
gi|410596504|gb|EKQ51173.1| putative membrane protein [Clostridium sp. Maddingley MBC34-26]
Length = 332
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N+++ + Q +RL + +LH+G+IH+ NM SL ++ +++Q FG + +Y S
Sbjct: 180 GAKVNILINQGQIWRLFTCAFLHSGLIHIACNMYSLYIIGPQIQQIFGTVKYLIIYACSC 239
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS--LSVLGSVI 195
SLLS + +SVGASGA+FGL+G +L+ I I N+ L + VI
Sbjct: 240 LTASLLS---YYMSPNSISVGASGAIFGLMGALLAFAI----IERNRIQKRFLFSIMQVI 292
Query: 196 ALNLAFGFIPGVDGVDNLAH 215
++NL G + +DN AH
Sbjct: 293 SINLFIGL--SIKNIDNFAH 310
>gi|420172602|ref|ZP_14679101.1| rhomboid family protein [Staphylococcus epidermidis NIHLM067]
gi|394241763|gb|EJD87172.1| rhomboid family protein [Staphylococcus epidermidis NIHLM067]
Length = 486
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL+SSM+LH H+++NM SL + +E G R+ +Y++SG G+ +S +
Sbjct: 203 YRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTT 262
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+SVGASGA+FGL+G++ +Y +K + ++G +IAL + F +
Sbjct: 263 T---ISVGASGAIFGLIGSIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSLFMSN 313
Query: 210 VDNLAHIGGFASGVLLGFI 228
++ +AH+GGF GVL+ I
Sbjct: 314 INIMAHLGGFIIGVLITLI 332
>gi|392597473|gb|EIW86795.1| rhomboid-domain-containing protein, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 338
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 23/221 (10%)
Query: 13 AWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSIST 72
A P + V I TM N A + C++ DI G F N +
Sbjct: 73 ARFPPCMKAVQNITLTTTMPCLNDTAN-PPTLNCLIEDICGFGGFHGTTPNQWFRQVV-- 129
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
+++ ++ + ++ +++HAG IH+++NM + + VS ++E+E G A
Sbjct: 130 ----------MVMGQSMNDKFITPIFIHAGFIHIILNMIAQLTVSAQIEREMGSAGFLLT 179
Query: 133 YLLSGFGGSLLSCLHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCTSLS 189
Y +G G++L G +V SVGASGA+FG + +L A+W L+
Sbjct: 180 YFAAGIFGNVLG-----GNFSLVGAPSVGASGAIFGCVAVTWVDLFAHWRYQYRPGRKLA 234
Query: 190 VLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
+ + +A G+IP + AH+GG G+L+G L+
Sbjct: 235 FMSIELVFGIALGYIPSHRSIS--AHLGGLCMGLLVGTALY 273
>gi|311112557|ref|YP_003983779.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
gi|310944051|gb|ADP40345.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
Length = 261
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 12/148 (8%)
Query: 89 QKYRLLSSMWLHA--GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ YR+L+S +LH+ H+V+NM SL + LEQ G+ R +YLLS GGS L
Sbjct: 114 EYYRVLTSGFLHSQNDYSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLLSIVGGSFGVLL 173
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPG 206
E+ VGASG +FGL+G L ++ + ++ L +IA+N+AFGF+
Sbjct: 174 LDDPTAEV--VGASGGIFGLIGAYLVIMVV-----LRERDNIRALMIMIAVNVAFGFL-- 224
Query: 207 VDGVDNLAHIGGFASGVLLGFILFLRPQ 234
V G+ AH GGF G L +L L PQ
Sbjct: 225 VPGISWQAHAGGFVIGALATAVL-LAPQ 251
>gi|322390373|ref|ZP_08063896.1| rhomboid family protein [Streptococcus parasanguinis ATCC 903]
gi|321142914|gb|EFX38369.1| rhomboid family protein [Streptococcus parasanguinis ATCC 903]
Length = 225
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V +Q +R++++ ++H G+ H V+NM +L + E FG LYLLSG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
+ ++++ GAS ALFGL GT+ + + Y + S+I +NL F F+
Sbjct: 113 AIF---TPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYT--SLIVVNLIFSFM 167
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
PG+ HIGG +G++L ++ +R + +++ Y
Sbjct: 168 PGISMA---GHIGGLVAGLMLAYVFPVRGEARFMNRTY 202
>gi|345851676|ref|ZP_08804644.1| hypothetical protein SZN_17977 [Streptomyces zinciresistens K42]
gi|345636882|gb|EGX58421.1| hypothetical protein SZN_17977 [Streptomyces zinciresistens K42]
Length = 295
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + + +RL++SM+ H + H NM SL + LE G AR LY SG GS +
Sbjct: 126 VAEGEWWRLVTSMFTHEAVWHFAFNMLSLWWLGGPLEAALGRARYLALYFCSGLAGSAFT 185
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L S+GASGA+FGL G A + + + +++ +NL F F
Sbjct: 186 YL--LADPHTASLGASGAIFGLFG-------ATAVLLRRLQYDMRPIIALLVINLIFTFA 236
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
PG + + AHIGG +GV++G+ + P+
Sbjct: 237 PGFN-ISWQAHIGGLVAGVIIGYAMVHAPR 265
>gi|51893006|ref|YP_075697.1| hypothetical protein STH1868 [Symbiobacterium thermophilum IAM
14863]
gi|51856695|dbj|BAD40853.1| conserved domain protein [Symbiobacterium thermophilum IAM 14863]
Length = 398
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+ + Q++RL+S ++LH G +HL NM + V E +G AR+ +Y ++G G +
Sbjct: 222 LAERTQQWRLVSHLFLHGGAMHLAFNMWAFWQVGRYCELIYGSARMLFIYFVAGVIGGVA 281
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
S G ++SVGASGA+ GL+G LI T N+ L + +A+NL FGF
Sbjct: 282 SVAVRPGL--VISVGASGAILGLMGA----LIYFATTVRNRRVDWQGLLAPVAINLLFGF 335
Query: 204 IPGVDGVDNLAHI 216
+ G VDN AHI
Sbjct: 336 VYGR--VDNYAHI 346
>gi|323340676|ref|ZP_08080928.1| rhomboid protease GluP [Lactobacillus ruminis ATCC 25644]
gi|335996819|ref|ZP_08562736.1| rhomboid family integral membrane protein [Lactobacillus ruminis
SPM0211]
gi|417974323|ref|ZP_12615144.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 25644]
gi|323091799|gb|EFZ34419.1| rhomboid protease GluP [Lactobacillus ruminis ATCC 25644]
gi|335351889|gb|EGM53380.1| rhomboid family integral membrane protein [Lactobacillus ruminis
SPM0211]
gi|346329320|gb|EGX97618.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 25644]
Length = 219
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + +RLL++M+LH G+ HL +NM +L + LE G R A LYL+SG G S
Sbjct: 48 VSNGEYWRLLTAMFLHIGLEHLALNMLTLYFIGASLEPILGSVRFAVLYLVSGICGDAAS 107
Query: 145 CLHHKGKKEIVSVGASGALFGLLGT--MLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
G +S GAS ALFGL G ML E N +L + LN+ F
Sbjct: 108 YSLTNG----LSAGASTALFGLFGAYLMLGESFRNNAYIKMMARQFLLL---VVLNIFFD 160
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFIL 229
F G+D HIGG SG L G+++
Sbjct: 161 FFS--SGIDIWGHIGGLLSGFLFGYVI 185
>gi|403387738|ref|ZP_10929795.1| membrane associated peptidase [Clostridium sp. JC122]
Length = 216
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
LGG+ NL+V+ + YRL ++ +LHA ++HL +NM +L + +E+ G + +Y+L
Sbjct: 56 LGGM-VNLLVKNGEYYRLFTAGFLHASVLHLTLNMIALNAIGSIVEKVLGKGKFIIVYIL 114
Query: 136 SGFGGSLLSCLHHKGKKEI-VSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
S S S + K I +SVGASGA+FGLLG++L + N ++ T L + V
Sbjct: 115 SLIFASYGSYVVANVKLGIGISVGASGAIFGLLGSLLIIVFLNKKVFGK--TVLRGITEV 172
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASG 222
I +NL GF V +D AH+ G +G
Sbjct: 173 IVVNLLIGFF--VPNIDITAHVTGGIAG 198
>gi|184199658|ref|YP_001853865.1| rhomboid family protein [Kocuria rhizophila DC2201]
gi|183579888|dbj|BAG28359.1| rhomboid family protein [Kocuria rhizophila DC2201]
Length = 241
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 87 KNQKYRLLSSMWLHA--GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ Q +R+L+S ++HA +HL++NM +L L LE G R+ L+L S GGS+
Sbjct: 100 QTQPWRMLTSGFVHAMPSPVHLLLNMYTLYLFGRMLEPLLGPWRMTALFLGSVLGGSVGV 159
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L G ++ +GASG +FGL G M + + T ++VL I +NL FGF+
Sbjct: 160 AL--WGDPGVLVIGASGGIFGLFGAMFVFI----RHFRGSVTPIAVL---IGINLVFGFL 210
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILF 230
V GV AH+GG +G LLG ++
Sbjct: 211 --VAGVAWQAHVGGLVAGALLGVLML 234
>gi|365925240|ref|ZP_09448003.1| rhomboid family integral membrane protein [Lactobacillus mali KCTC
3596 = DSM 20444]
gi|420266562|ref|ZP_14769020.1| Integral membrane protein, Rhomboid family [Lactobacillus mali KCTC
3596 = DSM 20444]
gi|394425142|gb|EJE98158.1| Integral membrane protein, Rhomboid family [Lactobacillus mali KCTC
3596 = DSM 20444]
Length = 216
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 83/162 (51%), Gaps = 14/162 (8%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
S+ L + G LIV Q +RL++ M+LH G H+V+NM +L V +LE G R
Sbjct: 30 SVGVLVEFGAKVNTLIV-AGQWWRLITPMFLHIGFEHIVLNMITLYFVGIQLENILGRGR 88
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGT--MLSE-LIANWTIYANKC 185
+YL+SG G+L S + + +S GAS ALFGL G M+ E +N I A
Sbjct: 89 FLAVYLVSGIAGNLASFAFN---PDALSAGASTALFGLFGIYLMMGESFSSNPYIRAMGR 145
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
L ++ LN+ FGF VD HIGG G L+G+
Sbjct: 146 QFL----LLVVLNIMFGF---YGSVDLAGHIGGLVGGFLMGY 180
>gi|419800122|ref|ZP_14325427.1| peptidase, S54 family [Streptococcus parasanguinis F0449]
gi|385696180|gb|EIG26685.1| peptidase, S54 family [Streptococcus parasanguinis F0449]
Length = 225
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V +Q +R++++ ++H G+ H V+NM +L + E FG LYLLSG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
+ ++++ GAS ALFGL GT+ + + Y + S+I +NL F F+
Sbjct: 113 AIF---TPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYT--SLIVVNLIFSFM 167
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
PG+ HIGG +G++L ++ +R + +++ Y
Sbjct: 168 PGISMA---GHIGGLVAGLMLAYVFPVRGEARFMNRTY 202
>gi|357400681|ref|YP_004912606.1| hypothetical protein SCAT_3097 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386356736|ref|YP_006054982.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337767090|emb|CCB75801.1| conserved membrane protein of unknown function [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365807244|gb|AEW95460.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 282
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 79 LDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGF 138
+D V + Q YRLL++ +LH ++H+ NM SL + LE G R +YLLS
Sbjct: 106 VDPTSGVAEGQWYRLLTATFLHQNVMHIGFNMLSLWWIGPGLEVALGRVRFLAVYLLSAL 165
Query: 139 GGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
GGS LS L S+GASGA+FGLLG A + + + ++I LN
Sbjct: 166 GGSALSFL--LANPNAGSLGASGAVFGLLG-------ATFVLMRRLRYDSRPIVAIIVLN 216
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
L F F +D AHIGG +G ++ F + P+
Sbjct: 217 LFFTFAQ-TGTIDWRAHIGGLVTGAVVAFGMVHAPR 251
>gi|227892800|ref|ZP_04010605.1| S54 family peptidase [Lactobacillus ultunensis DSM 16047]
gi|227865441|gb|EEJ72862.1| S54 family peptidase [Lactobacillus ultunensis DSM 16047]
Length = 226
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 9/181 (4%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
S + L +G ++ +V +Q +RL ++ +LH G++HLV N + + +E G
Sbjct: 34 ESTNVLMKMGAMNNLAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYIEPIMGHY 93
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R YLL+G GG+L S + +S GAS ALFGL G M + + N I+ +
Sbjct: 94 RYLATYLLAGIGGNLFSLAFSADRG--LSAGASTALFGLFGAMTAIGLRN--IHNPMISF 149
Query: 188 LSVLGSVIA-LNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
L V+A +NLA FIP G+D H+GG +G LL +L R Y + + A
Sbjct: 150 LGRQAFVLAIINLALDIFIP---GIDIWGHVGGLITGFLLAIVLGDRVMKKYDPKWRVLA 206
Query: 246 G 246
G
Sbjct: 207 G 207
>gi|395334565|gb|EJF66941.1| rhomboid-domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 360
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 70 ISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARI 129
+ +L D+ G +Q +R ++ ++LHAG+IH ++NM + M VS ++E+E G
Sbjct: 134 LCSLEDICGFGGFHNEVPDQWFRFITPIFLHAGLIHFLLNMLAQMTVSAQVEREMGTIAF 193
Query: 130 APLYLLSGFGGSLLSCLHHKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCT 186
LYL +G G++L G +V SVGASGA+FG + +L A+W
Sbjct: 194 LILYLAAGIFGNVLG-----GNFSLVGSPSVGASGAIFGTVAVAWVDLFAHWRYTYQPGK 248
Query: 187 SLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
L + + + +A GFIP VDN AH
Sbjct: 249 KLVFMIIELVIGVAIGFIP---YVDNFAH 274
>gi|441518028|ref|ZP_20999756.1| hypothetical protein GOHSU_24_00060 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441455057|dbj|GAC57717.1| hypothetical protein GOHSU_24_00060 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 244
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 80 DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFG 139
+R+L+ + +RLL+S +LH+ + HL +NM SL +V LE+ FG AR +YL+S FG
Sbjct: 63 NRHLVF---EYWRLLTSGFLHSSVPHLALNMISLYIVGRELERLFGPARYLTIYLMSLFG 119
Query: 140 GSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNL 199
GS L +G +VGASGA++GL+G +L + TS+ V VI LN+
Sbjct: 120 GSAAVLLFQQGPAP--TVGASGAIYGLMGALLVVV----LRLKLPATSVLV---VIGLNI 170
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVL 224
+ G+ AH+GG A G L
Sbjct: 171 VMSI--SIPGISLWAHLGGLAFGAL 193
>gi|449015504|dbj|BAM78906.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 364
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
E L G + + L LG N + Q +RL + ++LH G++HL+ N +L +SY E
Sbjct: 130 EGKLSGANSNILLALGA-KINSAIAAGQLWRLFTPIFLHGGLLHLLSNTYALYAISYECE 188
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
+G A +YL SG G+LLS +SVGAS ++FGL + L+ N+ I
Sbjct: 189 MAYGPLAFAVIYLASGAWGNLLSYWF----TPYLSVGASSSIFGLFSAYIVYLVNNYAIL 244
Query: 182 ANKC-TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI----LFLRPQYG 236
+ ++VL +++ N AFG PG D +DN AH+GG +G LL I L LR G
Sbjct: 245 GRQARRQITVLVALVVFNFAFGSTPG-DAIDNSAHLGGAIAGALLSEIVVPELILRDANG 303
Query: 237 YVSEKYIAAGYDAKHRQ 253
+ E A + + R+
Sbjct: 304 QLLENLKAEEVEMQLRK 320
>gi|426254137|ref|XP_004020741.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1 [Ovis
aries]
Length = 857
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 97 MWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVS 156
++LHAG++H +V++ M V LE+ G+ RI+ +++LSG G+L S L + E+ +
Sbjct: 662 LFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRISIIFILSGITGNLASALFLPYRAEVGN 721
Query: 157 VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHI 216
G SG G ++ +W I A + L +V+ FG +P +DN AHI
Sbjct: 722 SGHSGEWAGCHYPTWAQ---SWQILARPWRAFFKLLAVVLFLFTFGLLP---WIDNFAHI 775
Query: 217 GGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILL 271
GF SG+ L F YI+ G K+ Y++ C II L+
Sbjct: 776 SGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQLV 812
>gi|421625254|ref|ZP_16066107.1| peptidase, S54 family [Acinetobacter baumannii OIFC098]
gi|408698923|gb|EKL44408.1| peptidase, S54 family [Acinetobacter baumannii OIFC098]
Length = 269
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 88/177 (49%), Gaps = 26/177 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H G IHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGFIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSEL-----IANWTI 180
GSLLS L H + + VS GASGA+ G LG L+ L + +
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMG-LGAALTVLSLFPPLPHQAY 172
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
+K + L ++ A+NL FGF+ G++N AH+GG G LL I +L R Q+
Sbjct: 173 ILDKKSLLMIM----AINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLSYRTQF 223
>gi|419012186|ref|ZP_13559551.1| rhomboid family protein [Escherichia coli DEC1D]
gi|377862951|gb|EHU27758.1| rhomboid family protein [Escherichia coli DEC1D]
Length = 625
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 86/144 (59%), Gaps = 7/144 (4%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG-FGGSLLSCLH 147
+ +RLLSS++LH+ HL++NM +L+ V E+ G R+ ++L SG FGG + +C
Sbjct: 60 EPWRLLSSVFLHSSFSHLLMNMFALLAVGTVAERILGKWRLLIIWLFSGIFGGLISACYA 119
Query: 148 HKGKKEIV-SVGASGALFGLLGTMLSELIAN--WTIYANKCTSLSVLGSVIALNLAFGFI 204
+ ++IV SVGASGA+ G+ G ++ +A+ T + N+ +LG ++AL L +G
Sbjct: 120 LRESEQIVISVGASGAIMGIAGAAIATQLASGAGTHHKNQRRVFPLLG-MVALTLLYGTR 178
Query: 205 PGVDGVDNLAHIGGFASGVLLGFI 228
G+DN HIG +G LG++
Sbjct: 179 Q--TGIDNACHIGDLIAGGALGWL 200
>gi|326930681|ref|XP_003211471.1| PREDICTED: rhomboid family member 2-like [Meleagris gallopavo]
Length = 821
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGIIH +V++T M V LE+ G+ RI+ +++LSG G+L S +
Sbjct: 617 DQIYRLWLSLFLHAGIIHCLVSVTFQMTVLRDLEKLAGWLRISIIFILSGITGNLASAIF 676
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W +L L ++ G +P
Sbjct: 677 LPYRAE---VGPAGSQFGLLACLFVELFQSWQALEKPWKALLNLSGIVLFLFVCGLLP-- 731
Query: 208 DGVDNLAH 215
+DN+AH
Sbjct: 732 -WIDNIAH 738
>gi|304403852|ref|ZP_07385514.1| Rhomboid family protein [Paenibacillus curdlanolyticus YK9]
gi|304346830|gb|EFM12662.1| Rhomboid family protein [Paenibacillus curdlanolyticus YK9]
Length = 204
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 40/222 (18%)
Query: 9 EQWRAWL-----TPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKEN 63
E +R +L T +I + I+MF+ TM + D +
Sbjct: 7 ETFRGYLRMYPVTALIVAINIVMFIITM----LNGGSEDGYTL----------------- 45
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
Y G + T D GLD + +R +++++LHAG +HL N+ SL++ + LE+
Sbjct: 46 YRFGAFLQTEDDPFGLD--------EPWRYVTAIFLHAGFMHLFYNLISLIIFAPPLERL 97
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R ++++G G+L S L H G E++SVGASGA++G+ G L ++ + +
Sbjct: 98 LGHVRYGLFFIVTGVVGNLFSALFHHG--EVLSVGASGAIYGVYGAFL--FLSVFGKHRL 153
Query: 184 KCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLL 225
S + S++ L + F+ V ++ AH+GG +G +L
Sbjct: 154 DEGSRKTVYSILIFGLIYSFL--VPTINIWAHVGGGIAGFVL 193
>gi|160878203|ref|YP_001557171.1| rhomboid family protein [Clostridium phytofermentans ISDg]
gi|160426869|gb|ABX40432.1| Rhomboid family protein [Clostridium phytofermentans ISDg]
Length = 396
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 6/160 (3%)
Query: 83 LIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSL 142
LI N+ YRLL+ +LHA I HLV NM L ++ LE+ G + +Y LSG +
Sbjct: 242 LIKFNNEYYRLLTYQFLHANISHLVNNMLILAIMGSTLERHVGKFKYLLIYFLSGIVAGI 301
Query: 143 LSCLHHKGKKEIV-SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAF 201
S ++ K S+GASGA+FG++G + ++ N T ++ IAL+L
Sbjct: 302 ASMSYNMWKGLFSNSIGASGAVFGVIGAIALIVVVNKGRLETIGTRQIII--FIALSLYG 359
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
GF GVDN AH+GG +G + +++ R + G + E
Sbjct: 360 GFTS--QGVDNAAHVGGLLAGFFIAMLVY-RKKRGRIRED 396
>gi|410898505|ref|XP_003962738.1| PREDICTED: inactive rhomboid protein 2-like [Takifugu rubripes]
Length = 559
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVR-KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E L + L D+ GL L + +Q YRL S++LH G++H +++ M + L
Sbjct: 324 EGATLCSQVDCLNDVCGLLPFLDPKVPDQFYRLWLSLFLHEGVLHCAMSVVFQMTILRDL 383
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E+ G+ I+ +YLLSG G+L S + + E VG +G+ FGLL + EL W +
Sbjct: 384 ERLAGWVHISIIYLLSGITGNLASAVVLPYRPE---VGPAGSQFGLLACLFVELFQAWQV 440
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGF 227
+ L ++ L G +P ++N+AHI GF SG+LL F
Sbjct: 441 LEKPWKAFLELLVMLLFLLICGLLP---WINNIAHIFGFFSGLLLSF 484
>gi|417932692|ref|ZP_12576030.1| peptidase, S54 family [Propionibacterium acnes SK182B-JCVI]
gi|340774328|gb|EGR96815.1| peptidase, S54 family [Propionibacterium acnes SK182B-JCVI]
Length = 302
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 89 QKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL- 146
+ +RL++SM+ HA I H+ NM +L ++ LE G AR YL+SG GG L CL
Sbjct: 125 EPWRLVTSMFGHALSIFHIGFNMYALWVLGRSLEPFLGRARFLAAYLMSGLGGGALFCLM 184
Query: 147 -HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNL 199
G I+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 185 ATASGTGTILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGVSTRELWIVLAINA 237
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
A + G+ AH+GGF +G++ G I F P+
Sbjct: 238 ALLLF--ISGISWQAHLGGFLTGIVCGVIFFEDPK 270
>gi|307192271|gb|EFN75561.1| Rhomboid family member 1 [Harpegnathos saltator]
Length = 872
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL ++ +LHAGI+HL + + + LE+ G RIA +Y + G+L S +
Sbjct: 664 DQFYRLFTTTFLHAGIVHLAITLLIQYFLMRDLEKLTGSLRIAFIYFIGALAGNLASAIF 723
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +GA F LL T++ E++ W + + +LS L ++ L G +P
Sbjct: 724 VPYRAE---VGPAGAHFALLATLVVEVLHCWPMLKHPRRALSKLILILMGLLVLGILP-- 778
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
VDN AH+ GF G L + L +G+ +
Sbjct: 779 -WVDNYAHLFGFIFGFLAAYALMPFISFGHYDRR 811
>gi|336234689|ref|YP_004587305.1| rhomboid protease [Geobacillus thermoglucosidasius C56-YS93]
gi|335361544|gb|AEH47224.1| Rhomboid protease [Geobacillus thermoglucosidasius C56-YS93]
Length = 389
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N +++ + +R + ++LH G +HL++N +L + +E+ +G R +Y +G
Sbjct: 216 GAKFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFFIYFTAG 275
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + +++G +
Sbjct: 276 FFGTLGSFLFTAS----LSAGASGAIFGLFGALLY----FGTVYRHLFWQTIGTNIIG-L 326
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
I +NL FG I V G+DN HIGG G L I+ L + + +
Sbjct: 327 IVINLVFGMI--VPGIDNAGHIGGLIGGYLAAGIVHLPNHFDWKKQ 370
>gi|319946123|ref|ZP_08020371.1| S54 family peptidase [Streptococcus australis ATCC 700641]
gi|417920499|ref|ZP_12564005.1| peptidase, S54 family [Streptococcus australis ATCC 700641]
gi|319747769|gb|EFW00015.1| S54 family peptidase [Streptococcus australis ATCC 700641]
gi|342829248|gb|EGU63607.1| peptidase, S54 family [Streptococcus australis ATCC 700641]
Length = 228
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 69 SISTLRDLGG-LDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
S+ T+ D GG L + V +Q +RLL++M++H G+ H V+NM +L + E FG
Sbjct: 36 SVQTVYDFGGVLGAEIQVDPSQSWRLLAAMFVHVGLQHFVLNMVTLYFLGRIAEDLFGSK 95
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
LYLLSG G+L + E+V+ GAS AL GL T++S + Y +
Sbjct: 96 AFLALYLLSGLMGNLFVLVF---SPEVVAAGASTALSGLFATIVSLRFIARSPYIRYLSQ 152
Query: 188 LSVLGSVIALNLAFGFIPGVD 208
++I +N+ F F+PG+
Sbjct: 153 RYT--ALILINILFSFMPGIS 171
>gi|168186765|ref|ZP_02621400.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
gi|169295367|gb|EDS77500.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
Length = 202
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G + N +V Q YRL++ M+LH G++HL +NM +L + +E+ +G + +YL+ G
Sbjct: 57 GANENTLVSSGQYYRLITCMFLHGGLVHLALNMYALEAIGPIVERIYGKMKYIIIYLVGG 116
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
SL S + G VS+GASGA+F LLG M I + V SVI +
Sbjct: 117 LISSLSSYVFSTG----VSIGASGAIFALLGAMFVLTIKMRDVVGKAVIKNIV--SVIGI 170
Query: 198 NLAFGFIPGVDGVDNLAH 215
N+ G + +DN AH
Sbjct: 171 NIFIGL--AIPNIDNFAH 186
>gi|225874838|ref|YP_002756297.1| S54 (rhomboid) family peptidase [Acidobacterium capsulatum ATCC
51196]
gi|225792351|gb|ACO32441.1| peptidase, S54 (rhomboid) family [Acidobacterium capsulatum ATCC
51196]
Length = 299
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 94/186 (50%), Gaps = 16/186 (8%)
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
F PW P+ L G L++ +Q +RL+++M++H GIIHL VNM L +
Sbjct: 76 FSPW------APTTLQLYYSGANIGPLVLAHHQWWRLITAMFVHGGIIHLGVNMWCLWNL 129
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHK----GKKEIVSVGASGALFGLLGTML- 171
E G + YLL+G+ G +LS H G + +VSVGASGA+FGL G ++
Sbjct: 130 GLLAEPLMGPVGVFAAYLLTGYAGDILSVARHPGVGGGPQGVVSVGASGAIFGLAGVLII 189
Query: 172 ---SELIANWTIYANKCTSLSVLGSVIALNLAFG--FIPGVDGVDNLAHIGGFASGVLLG 226
S L+ NK + +V+ L L G F VDN+AHIGGF SG+ LG
Sbjct: 190 LLKSPLLPIPKADLNKLRRSVIWFAVLNLVLDAGIDFSHFFIQVDNMAHIGGFLSGMALG 249
Query: 227 FILFLR 232
+ R
Sbjct: 250 LPMVPR 255
>gi|423719255|ref|ZP_17693437.1| rhomboid family protein [Geobacillus thermoglucosidans TNO-09.020]
gi|383368158|gb|EID45433.1| rhomboid family protein [Geobacillus thermoglucosidans TNO-09.020]
Length = 389
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N +++ + +R + ++LH G +HL++N +L + +E+ +G R +Y +G
Sbjct: 216 GAKFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFFIYFTAG 275
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + +++G +
Sbjct: 276 FFGTLGSFLFTAS----LSAGASGAIFGLFGALLY----FGTVYRHLFWQTIGTNIIG-L 326
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
I +NL FG I V G+DN HIGG G L I+ L + + +
Sbjct: 327 IVINLVFGMI--VPGIDNAGHIGGLIGGYLAAGIVHLPNHFDWKKQ 370
>gi|227544150|ref|ZP_03974199.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|338202576|ref|YP_004648721.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
gi|154705524|gb|ABS84188.1| rhomboid family protein [Lactobacillus reuteri]
gi|227185866|gb|EEI65937.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|336447816|gb|AEI56431.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
Length = 219
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 72 TLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
TL ++G LI R+ + +RL+S ++LH G+ HLVVN +L+ + +E+ FG R+
Sbjct: 37 TLLNMGARSTPLI-REGEWWRLVSPVFLHVGLSHLVVNSVTLLYIGRYIEEFFGHWRMVI 95
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
+Y +S F G+L S + VS GAS A+FGL G L + + S + L
Sbjct: 96 IYFVSAFFGNLTSAVF---MPSTVSAGASTAIFGLFGAFLMLGVCFHHNVIVRVLSRTFL 152
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
VI +N+ F + GVD + HIGG G + FI+
Sbjct: 153 LFVI-INIVMDFF--LSGVDLVGHIGGLFGGFFIAFIV 187
>gi|294649763|ref|ZP_06727167.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292824344|gb|EFF83143.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 267
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL SSM+ H G+IHL++NM +L + EQ FG LY L+G
Sbjct: 54 GADFTPLTFLGQPERLFSSMFFHFGMIHLMLNMWALYIFGSIAEQLFGRRYYIALYFLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLS-----ELIANWTI 180
GS+LS L H K + +S GASGA+ G LG L+ ++
Sbjct: 114 LMGSVLSSYLSILDGYQLLQHFDPKYLPKISAGASGAVMG-LGAALTIISVLPMLPRQRF 172
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+K + L ++ A+NL FGF V G++N AHIGG G +L +L + G
Sbjct: 173 LLDKKSLLLIM----AINLIFGFT--VSGINNAAHIGGMIMGAVLATAWYLSQKTG 222
>gi|312110225|ref|YP_003988541.1| Rhomboid protease [Geobacillus sp. Y4.1MC1]
gi|311215326|gb|ADP73930.1| Rhomboid protease [Geobacillus sp. Y4.1MC1]
Length = 389
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N +++ + +R + ++LH G +HL++N +L + +E+ +G R +Y +G
Sbjct: 216 GAKFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFFIYFTAG 275
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN---KCTSLSVLGSV 194
F G+L S L +S GASGA+FGL G +L T+Y + + +++G +
Sbjct: 276 FFGTLGSFLFTAS----LSAGASGAIFGLFGALLY----FGTVYRHLFLQTIGTNIIG-L 326
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
I +NL FG I V G+DN HIGG G L I+ L + + +
Sbjct: 327 IVINLVFGMI--VPGIDNAGHIGGLIGGYLAAGIVHLPNHFDWKKQ 370
>gi|262372017|ref|ZP_06065296.1| rhomboid family protein AarA [Acinetobacter junii SH205]
gi|262312042|gb|EEY93127.1| rhomboid family protein AarA [Acinetobacter junii SH205]
Length = 268
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + +Q RL +SM+ H G+IHL++NM +L + EQ FG + +Y L+G
Sbjct: 54 GADFTPLTFLSQPERLFTSMFFHFGLIHLMLNMWALYIFGSVAEQLFGRSYYIGMYFLAG 113
Query: 138 FGGSLLSC-LHHKGKKEI-----------VSVGASGALFGLLG--TMLSEL--IANWTIY 181
GS+LS L + E+ +S GASGA+ GL T++S L +AN
Sbjct: 114 LMGSVLSSYLSIRDAYELLQNFDAALLPRISAGASGAVMGLGAALTIISLLPQLANQRFI 173
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+K + L ++ A+NL FGF V G++N AHIGG G LL + +L +
Sbjct: 174 LDKKSLLMIM----AINLVFGFT--VSGINNAAHIGGMLMGGLLAGLWYLSQK 220
>gi|452975048|gb|EME74867.1| rhomboid protease YggP [Bacillus sonorensis L12]
Length = 512
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +R ++ + LH G+IHL+ N +L+ V E+ FG R +Y+ +G
Sbjct: 215 GAKENSLILAGEWWRFVTPIILHIGLIHLMFNTFALLSVGAAAERVFGSFRFLIIYITAG 274
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS---- 193
GS+ S L S GASGA+FG LG +L + ++N+ L +G+
Sbjct: 275 VFGSIGSFLFSP----YPSAGASGAIFGCLGALL------FLAFSNRKAFLKTIGTNIMV 324
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYI 243
+I LNL GF V +DN HIGG G+L + L P+ ++++ I
Sbjct: 325 MIILNLGLGF--AVSNIDNAGHIGGLVGGLLSAMAVGL-PEKKRLAQRVI 371
>gi|430805416|ref|ZP_19432531.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
gi|429502334|gb|ELA00646.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
Length = 533
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 17/175 (9%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
L G + L D GG + + + Q +RLL++ +LH + HL NM L L+ +E+ F
Sbjct: 196 LDGAAPKMLIDWGG-NLGALTQDGQWWRLLTATFLHGSLKHLAANMVVLYLLGKHVERFF 254
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML-------SELIAN 177
G +Y+ +G GS LS + + VSVGASGA+FG+ G +L EL N
Sbjct: 255 GTRSFLLIYVGAGLLGSALSL--YFAAQTSVSVGASGAVFGIGGALLVAALLHRRELPQN 312
Query: 178 WTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
N+ S +V+ +I +LA GF+ VDN AH+GG GVLL L +R
Sbjct: 313 ---IRNRLVSDAVI--MIGYSLAQGFLS--TRVDNAAHVGGLIGGVLLALCLPVR 360
>gi|320108412|ref|YP_004184002.1| rhomboid family protein [Terriglobus saanensis SP1PR4]
gi|319926933|gb|ADV84008.1| Rhomboid family protein [Terriglobus saanensis SP1PR4]
Length = 280
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 46/231 (19%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
PS++ L G + +L++ Q +R++S+M++H G+IHL NM L + E GF
Sbjct: 68 PSLADLIRFGANNSDLVIVHGQWWRIISAMFVHVGLIHLATNMWCLWNLGLLGEPLLGFF 127
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKE--IVSVGASGALFGLLGTMLSELIANWTIYANKC 185
+ +YLLSG G+LLS K+ V GASGA+FG+ G ++ + +NK
Sbjct: 128 GMISVYLLSGAAGNLLSIAWDVIWKQHGQVGAGASGAVFGIAGILI-------VLLSNKR 180
Query: 186 TSLSVLG--------------SVI---ALNLAFGFIP---GVDGVDNLAHIGGFASGVLL 225
S S G SVI LNLA G V +DN AHIGGF G+ +
Sbjct: 181 LSESRGGRPGIPWMELRALRKSVIQFAGLNLAIGLASIFFDVVRIDNSAHIGGFVCGLAM 240
Query: 226 GFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWI-IALILLVLGY 275
G L G V KY+ Q++ ++ AL+L + GY
Sbjct: 241 GVPLLPEMTSGRV----------------KYLERQKVAFLGFALLLSLFGY 275
>gi|168181264|ref|ZP_02615928.1| peptidase, S54 family [Clostridium botulinum Bf]
gi|237793720|ref|YP_002861272.1| putative membrane associated peptidase [Clostridium botulinum Ba4
str. 657]
gi|182675329|gb|EDT87290.1| peptidase, S54 family [Clostridium botulinum Bf]
gi|229262482|gb|ACQ53515.1| putative membrane associated peptidase [Clostridium botulinum Ba4
str. 657]
Length = 342
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + YRL+++M+LH G+IHL +NM +L + +E FG + +Y +SG
Sbjct: 190 GAKVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNAIGPLVEIYFGKVKYLIIYFISG 249
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS----LSVLGS 193
S S L VS+GASGA+FG+LG L +IA Y N+ L+ + S
Sbjct: 250 ILSSYFSYLFSAS----VSIGASGAIFGILGATL--IIA----YTNRKKGGKEFLNNIIS 299
Query: 194 VIALNLAFGF-IPGVDG 209
VI +NL GF IP VD
Sbjct: 300 VIVVNLILGFSIPNVDN 316
>gi|159900030|ref|YP_001546277.1| rhomboid family protein [Herpetosiphon aurantiacus DSM 785]
gi|159893069|gb|ABX06149.1| Rhomboid family protein [Herpetosiphon aurantiacus DSM 785]
Length = 286
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 66 LGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFG 125
LG S L D+GG + +RL ++ LH GI+H+ NM +L + +E+ +G
Sbjct: 68 LGAKWSPLMDIGG----------EWWRLFTATVLHGGIVHIGFNMYALYALGPTVERFYG 117
Query: 126 FARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKC 185
R + +YL++G GG+ S + G S+GASGA+FGL+G ++ ++ ++ +
Sbjct: 118 SLRFSVIYLIAGIGGAWAS--YSFGSLTGPSIGASGAIFGLIGCLIGFFLSARSVLGDFA 175
Query: 186 -TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
+L + A+NL G + +DN AHIGG G+ +G+ L P+ Y+++ +
Sbjct: 176 RQNLRQMVGTAAINLIIG-LSFSSVIDNYAHIGGMLMGLAVGY--GLAPRLVYIADWF 230
>gi|89894371|ref|YP_517858.1| hypothetical protein DSY1625 [Desulfitobacterium hafniense Y51]
gi|219668797|ref|YP_002459232.1| rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|423073963|ref|ZP_17062698.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
gi|89333819|dbj|BAE83414.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539057|gb|ACL20796.1| Rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|361855174|gb|EHL07168.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
Length = 327
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + +RL +SM+LH G +HL N+ +L + E+ G R +Y+LSG
Sbjct: 181 GAKVNALIIQGEYWRLFTSMFLHIGFLHLAFNLYALWALGAIAEELLGRVRYITVYILSG 240
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL------SVL 191
GS+ S + +S GASGA+FG+LG ++ +Y+ + L L
Sbjct: 241 ILGSVASFFF----TDAISAGASGAIFGILGALV--------VYSRRKPFLWKSGFGKSL 288
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
V+ +NL GF G+D AH+GG +G+L +++ ++
Sbjct: 289 AVVVLINLGLGFFQ--TGIDVYAHLGGLVTGMLFTWLISMK 327
>gi|260550677|ref|ZP_05824885.1| rhomboid family protein [Acinetobacter sp. RUH2624]
gi|424056413|ref|ZP_17793934.1| hypothetical protein W9I_02783 [Acinetobacter nosocomialis Ab22222]
gi|425741039|ref|ZP_18859198.1| peptidase, S54 family [Acinetobacter baumannii WC-487]
gi|260406183|gb|EEW99667.1| rhomboid family protein [Acinetobacter sp. RUH2624]
gi|407441453|gb|EKF47959.1| hypothetical protein W9I_02783 [Acinetobacter nosocomialis Ab22222]
gi|425493886|gb|EKU60110.1| peptidase, S54 family [Acinetobacter baumannii WC-487]
Length = 269
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 88/177 (49%), Gaps = 26/177 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ G LG L+ L +++
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMG-LGAALTVL----SLFPPLP 168
Query: 186 TSLSVLGS-----VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
+ +L ++A+NL FG + G++N AH+GG G LL I +L R Q+
Sbjct: 169 HQVYILDKKALLMIMAINLIFGLV--ATGINNAAHVGGMIMGALLALIWYLSYRTQF 223
>gi|170761626|ref|YP_001785737.1| membrane associated peptidase [Clostridium botulinum A3 str. Loch
Maree]
gi|169408615|gb|ACA57026.1| putative membrane associated peptidase [Clostridium botulinum A3
str. Loch Maree]
Length = 341
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + YRL+++M+LH G+IHL +NM +L + +E FG + +Y +SG
Sbjct: 190 GAKVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNAIGPLVEIYFGKVKYLIIYFISG 249
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS----LSVLGS 193
S S L VS+GASGA+FG+LG L +IA Y N+ L+ + S
Sbjct: 250 ILSSYFSYLFSAS----VSIGASGAIFGILGATL--IIA----YTNRKKGGKEFLNNIIS 299
Query: 194 VIALNLAFGF-IPGVDG 209
VI +NL GF IP VD
Sbjct: 300 VIVVNLILGFSIPNVDN 316
>gi|424060759|ref|ZP_17798250.1| hypothetical protein W9K_01873 [Acinetobacter baumannii Ab33333]
gi|193076715|gb|ABO11420.2| hypothetical protein A1S_0988 [Acinetobacter baumannii ATCC 17978]
gi|404668711|gb|EKB36620.1| hypothetical protein W9K_01873 [Acinetobacter baumannii Ab33333]
Length = 269
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 26/177 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GI+HL++NM +L + E + LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIVHLMLNMGALYIFGNVAEVLLSRSYFIILYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ G LGT L+ L +++
Sbjct: 114 VFGSLLSSYINIQNGYELLQHFDQSLLPHVSAGASGAIMG-LGTALTVL----SLFPPLP 168
Query: 186 TSLSVLGS-----VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
+ +L +A+NL FGF+ G++N AH+GG G LL I +L R Q+
Sbjct: 169 HQVRILNKKVYLVTMAINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLSYRTQF 223
>gi|126651489|ref|ZP_01723693.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
gi|126591742|gb|EAZ85838.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
Length = 207
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 12/169 (7%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
P + TL G+ N +V+K + +R+ S+++LHAG +H+ NM SL L LE+ G A
Sbjct: 35 PGVGTLLWNYGIQANFLVQKGEWWRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIAGKA 94
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R +YL+SG G++ + + + S+GASGA+FG+ G Y +
Sbjct: 95 RFITIYLVSGIVGNMATYIFY--DSSYASLGASGAIFGIFGAF-----GALVYYTRRTMP 147
Query: 188 L--SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ ++ +I +++ F+ V+ AH+GG +G +LG I +L P+
Sbjct: 148 MLRKLILPIIIISVIMTFLQ--PNVNVFAHLGGLVTGFILGLI-YLHPK 193
>gi|296167263|ref|ZP_06849666.1| rhomboid family protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897363|gb|EFG76966.1| rhomboid family protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 285
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 77 GGLDRNLI-----VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAP 131
G L+R L V Q YRL +S +LH G HLV NM +L +V LE G R
Sbjct: 94 GNLERQLALWPPAVADGQYYRLATSAFLHYGATHLVFNMWALYVVGPPLESWLGRLRFGA 153
Query: 132 LYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVL 191
LY +SG GGS+L ++ + + GASGA+FGL G A + + + +
Sbjct: 154 LYAMSGLGGSVL--VYLVSPLDTATAGASGAIFGLFG-------ATFVVGKRLAVDVRWV 204
Query: 192 GSVIALNLAFGFIPGVDGVDNL---AHIGGFASGVLLGFILFLRPQ 234
VIA+NL F F+ + + AH+GG +G L+ P+
Sbjct: 205 VVVIAINLVFTFLVPLMSSQRISWQAHVGGLVTGGLVAAAYVYPPR 250
>gi|226952474|ref|ZP_03822938.1| rhomboid family protein [Acinetobacter sp. ATCC 27244]
gi|226836796|gb|EEH69179.1| rhomboid family protein [Acinetobacter sp. ATCC 27244]
Length = 267
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 87/175 (49%), Gaps = 22/175 (12%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL SSM+ H G+IHL++NM +L + EQ FG LY L+G
Sbjct: 54 GADFTPLTFLGQPERLFSSMFFHFGMIHLMLNMWALYIFGSIAEQLFGRRYYIALYFLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLG--TMLSEL--IANWTIY 181
GS+LS L H K + +S GASGA+ GL T++S L +
Sbjct: 114 LMGSVLSSYLSILDGYQLLQHFDPKYLPKISAGASGAVMGLGAALTIISVLPVLPRQRFL 173
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+K + L ++ A+NL FGF V G++N AHIGG G +L +L + G
Sbjct: 174 LDKKSLLFIM----AINLIFGFT--VSGINNAAHIGGMLMGAVLATAWYLSQKTG 222
>gi|256963891|ref|ZP_05568062.1| membrane-associated serine protease [Enterococcus faecalis
HIP11704]
gi|257416957|ref|ZP_05593951.1| membrane-associated serine protease [Enterococcus faecalis ARO1/DG]
gi|307272082|ref|ZP_07553345.1| peptidase, S54 family protein [Enterococcus faecalis TX0855]
gi|307280665|ref|ZP_07561713.1| peptidase, S54 family protein [Enterococcus faecalis TX0860]
gi|256954387|gb|EEU71019.1| membrane-associated serine protease [Enterococcus faecalis
HIP11704]
gi|257158785|gb|EEU88745.1| membrane-associated serine protease [Enterococcus faecalis ARO1/DG]
gi|306504031|gb|EFM73248.1| peptidase, S54 family protein [Enterococcus faecalis TX0860]
gi|306511198|gb|EFM80205.1| peptidase, S54 family protein [Enterococcus faecalis TX0855]
Length = 236
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+I L + G + R L+ + ++ +R ++ M+LH G +H+++NM +L + ++E +G R
Sbjct: 41 NILNLVNWGAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG G++ S G VS GAS ALFGL G +I N
Sbjct: 101 YLGIYLLSGIAGNIASFAF--GTPNSVSAGASTALFGLFGAF---VILGRHFRDNPAIMY 155
Query: 189 SV--LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
V I +NL F VD + H+GG G+L +A
Sbjct: 156 MVQRYSMFIVINLLFNLFS--SSVDMMGHVGGLIGGLL------------------VATA 195
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVL 273
+ +RQ + ++++ + I LV+
Sbjct: 196 FAVPNRQEAFNKHERIMATLIFIFLVV 222
>gi|415885504|ref|ZP_11547432.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
gi|387591173|gb|EIJ83492.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
Length = 518
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + +R + ++LH G++HL++N +L + +E+ +G R +YL +G
Sbjct: 215 GAKFNPLINEGEWWRFFTPIFLHIGLLHLLMNTLALYYLGTVVERIYGNVRFMLIYLAAG 274
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
F GSL S + +S GASGA+FG G +L + + ++ + +++L V+ +
Sbjct: 275 FAGSLASFVFSPS----LSAGASGAIFGCFGALLYFGVIHPRLFF-RTMGMNIL-VVLGI 328
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
NLA GF + G+DN HIGG G L +L
Sbjct: 329 NLALGFT--LPGIDNAGHIGGLIGGFLAAGVL 358
>gi|413920157|gb|AFW60089.1| hypothetical protein ZEAMMB73_222778 [Zea mays]
Length = 194
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 18/103 (17%)
Query: 170 MLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
MLSELI NW++YANK +L L VI NLA G +P VDN AHIGG SG LLGF++
Sbjct: 1 MLSELITNWSLYANKVAALLTLLLVILSNLALGLLP---RVDNFAHIGGLVSGFLLGFVV 57
Query: 230 FLRPQYGYVSEKY---------------IAAGYDAKHRQPKYM 257
F+RP +++++ +AA KHR +Y+
Sbjct: 58 FVRPHLDWLTQQQRSGGGGQGQQQAPPPVAAARKRKHRTYQYV 100
>gi|255974810|ref|ZP_05425396.1| membrane-associated serine protease [Enterococcus faecalis T2]
gi|255967682|gb|EET98304.1| membrane-associated serine protease [Enterococcus faecalis T2]
Length = 230
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+I L + G + R L+ + ++ +R ++ M+LH G +H+++NM +L + ++E +G R
Sbjct: 35 NILNLVNWGAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWR 94
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG G++ S G VS GAS ALFGL G +I N
Sbjct: 95 YLGIYLLSGIAGNIASFAF--GTPNSVSAGASTALFGLFGAF---VILGRHFRDNPAIMY 149
Query: 189 SV--LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
V I +NL F VD + H+GG G+L +A
Sbjct: 150 MVQRYSMFIVINLLFNLFS--SSVDMMGHVGGLIGGLL------------------VATA 189
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVL 273
+ +RQ + ++++ + I LV+
Sbjct: 190 FAVPNRQEAFNKHERIMATLIFIFLVV 216
>gi|375138853|ref|YP_004999502.1| hypothetical protein [Mycobacterium rhodesiae NBB3]
gi|359819474|gb|AEV72287.1| putative membrane protein [Mycobacterium rhodesiae NBB3]
Length = 282
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 79/154 (51%), Gaps = 21/154 (13%)
Query: 79 LDRNLI-----VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLY 133
L R L+ V + YRL+SS +LH G H++ NM +L +V LE G R A LY
Sbjct: 92 LQRGLVLFSPAVADGEWYRLISSAFLHYGPTHILFNMWALYVVGPPLEAALGRLRFASLY 151
Query: 134 LLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSV--L 191
L+S GGS+L L + + GASGA+FGL G T K +L V +
Sbjct: 152 LVSALGGSVLVYLLSALGAQ--TAGASGAIFGLFGA---------TFVVGKRLNLDVRWV 200
Query: 192 GSVIALNLAFGFIPGVDGVDNLA---HIGGFASG 222
+IALNLAF F+ + N++ HIGG +G
Sbjct: 201 VGLIALNLAFTFVIPLISSQNISWQGHIGGLVTG 234
>gi|350645981|emb|CCD59258.1| RHBDF1 protein (S54 family) [Schistosoma mansoni]
Length = 349
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
NQ YR+ +S++LHAG++HL++ + M+ LE+ G+ RI +Y+LSG GSL S +
Sbjct: 221 NQMYRIFTSLFLHAGVLHLILTLGVQMIFMRDLEKMIGWHRITLVYILSGCIGSLTSGIF 280
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ V G +GA F LLG L +LI W A+ +L ++ + FG +P
Sbjct: 281 LPYQ---VETGPTGAQFALLGISLVDLIHCWQFLAHPWYALLRNILLVFILFTFGLLP-- 335
Query: 208 DGVDNLAHIGGFASG 222
+DN A+ G F S
Sbjct: 336 -WIDNYANAGSFLSA 349
>gi|300698196|ref|YP_003748857.1| putative rhomboid protease [Ralstonia solanacearum CFBP2957]
gi|299074920|emb|CBJ54489.1| putative rhomboid protease [Ralstonia solanacearum CFBP2957]
Length = 543
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
N L P I L LGG + V+ + +RLLS+ +LHAG++HL +NM L +E+
Sbjct: 202 NPLQTP-IGVLFSLGG-NAAFEVQHGEWWRLLSATFLHAGVLHLAINMFGLYATGVAVER 259
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
+G +YL +G GS LS + + VGASGA+FG+ G L + ++
Sbjct: 260 IYGPVAYLLIYLGAGLLGSALSLSF--AAQHAIGVGASGAVFGVAGAWLVAIGRYRSLMP 317
Query: 183 NKCTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ L+ LG + +L G GVDN AHIGG A G +L IL R
Sbjct: 318 QTLSKRLLTQLGLFVLYSLVQGLTK--PGVDNAAHIGGLAGGCMLAMILPAR 367
>gi|374374022|ref|ZP_09631681.1| Peptidase S54, rhomboid domain [Niabella soli DSM 19437]
gi|373233464|gb|EHP53258.1| Peptidase S54, rhomboid domain [Niabella soli DSM 19437]
Length = 490
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
+L P +L + G R I + Q +RLL++ +LH GI HL++NM +L+ + LE
Sbjct: 177 ILMPDNESLLNWGANFRP-ITLEGQWWRLLTNCFLHVGIFHLLLNMYALLYIGVLLEPLL 235
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G R YLL+G S+ S H +S GASGA+FG+ G L+ L N +
Sbjct: 236 GRTRFISAYLLTGITASITSLWWH---DLTISAGASGAIFGMYGVFLAMLTTNLIEKTAR 292
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
L+ + + NL +G G+DN AH
Sbjct: 293 KPLLTSIAVFVGYNLIYGL---KGGIDNAAH 320
>gi|205374009|ref|ZP_03226809.1| hypothetical protein Bcoam_12572 [Bacillus coahuilensis m4-4]
Length = 392
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + +R ++ ++LH G HL++N +L+L+ +E+ FG R +YLL+G
Sbjct: 214 GAKFNPLILEGEWWRFITPIFLHIGFFHLLMNTFALVLIGREVEKIFGKWRFLFIYLLAG 273
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
G + S + +S GASGA+FG G +L ++ + +++L ++ L
Sbjct: 274 IIGCIASFYFNPVG---LSAGASGAIFGCFGALLYFGYTFPQVFF-RTMGMNIL-VIVGL 328
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
NL GF V G+DN HIGG G + I++ P+ VS+ Y G
Sbjct: 329 NLVLGFT--VPGIDNAGHIGGLVGGFIATGIVYF-PRKKSVSQLYYVTG 374
>gi|340724954|ref|XP_003400842.1| PREDICTED: hypothetical protein LOC100644578 [Bombus terrestris]
Length = 1834
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 57/186 (30%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL ++M+LHAG++HL + + + LE+ G RIA +Y + G+L S +
Sbjct: 1626 DQFYRLFTTMFLHAGVLHLSITLMVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIF 1685
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +GA F LL T++ E++ W + + LS L V+ L G +P
Sbjct: 1686 VPYRAE---VGPAGAHFALLATLIVEVLHCWPMLKHPRRVLSKLIFVLLGLLILGMLP-- 1740
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIA 267
VDN AH+ GF G L + L +G+ YD + + L WI
Sbjct: 1741 -WVDNYAHLFGFIFGFLAAYALMPFISFGH---------YDRRRK-------IWLIWICL 1783
Query: 268 LILLVL 273
++++VL
Sbjct: 1784 ILIVVL 1789
>gi|168699238|ref|ZP_02731515.1| Rhomboid-like protein [Gemmata obscuriglobus UQM 2246]
Length = 418
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
+R L+ M++H GI+H+++NM L +E+ G A YL+SG GGSL S + G
Sbjct: 122 WRALTCMFVHIGILHILMNMWVLSATGPLVERMLGNAGFLVAYLVSGLGGSLASLWLNPG 181
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWT-IYANKCTSLSVLG-SVIALNLAFGFIPGVD 208
+VS GASGA+FG+ G +L L T I T L G +A N+ FG
Sbjct: 182 ---VVSAGASGAVFGIYGALLGLLQRQRTSIPPAALTGLKNSGLGFLAYNVFFGLT--QP 236
Query: 209 GVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
+D AH GGF +G L G +L S + AG A+
Sbjct: 237 NIDLAAHAGGFVTGFLCGLVL---------SRPFTPAGVAAR 269
>gi|315658175|ref|ZP_07911047.1| rhomboid family protein [Staphylococcus lugdunensis M23590]
gi|315496504|gb|EFU84827.1| rhomboid family protein [Staphylococcus lugdunensis M23590]
Length = 489
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 10/139 (7%)
Query: 91 YRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKG 150
YRL++SM+LH H+++NM SL + +E G ++ LY++SG G+ LS +
Sbjct: 206 YRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMKMLILYIISGLFGNFLSLSFN-- 263
Query: 151 KKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS-VIALNLAFGFIPGVDG 209
+ VS GASGA+FGL+G +++ + +K S ++G +IAL + GF +
Sbjct: 264 -TDTVSAGASGAIFGLIGAIIA------MMIISKVYSRKMIGQLLIALVILIGFSLLLSN 316
Query: 210 VDNLAHIGGFASGVLLGFI 228
V+ +AH+GGF SG+LL +I
Sbjct: 317 VNIMAHLGGFISGLLLIYI 335
>gi|411003693|ref|ZP_11380022.1| hypothetical protein SgloC_12861 [Streptomyces globisporus C-1027]
Length = 301
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + Q YRL++SM+LH ++HL NM L + +LE G +R LYLLSG GS L+
Sbjct: 132 VAEGQWYRLVTSMFLHQEVVHLGFNMLGLWWLGGQLEAALGRSRYLALYLLSGLAGSALT 191
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L + S+GASGA++GL G A + + + ++A+NLAF F
Sbjct: 192 YLLAAQNQP--SLGASGAVYGLFG-------ATAVLMRRMNYDMRPVLILLAVNLAFTFF 242
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
DG+ AH+GG +GV + + P+
Sbjct: 243 -NRDGIAWQAHVGGLIAGVAIAIGMVHAPR 271
>gi|443326975|ref|ZP_21055612.1| putative membrane protein [Xenococcus sp. PCC 7305]
gi|442793404|gb|ELS02854.1| putative membrane protein [Xenococcus sp. PCC 7305]
Length = 203
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
Query: 72 TLRDLGGL-DRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIA 130
TL LG L N +++ + +RL+++ +LH G HL+ NM +L + +E G R
Sbjct: 37 TLYRLGALVSEN--IKQGEWWRLINANFLHFGWFHLISNMLALFFIGSIVELSIGVERYL 94
Query: 131 PLYLLSGFGGSLLSCL--HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG G L L ++ G+ ++V +GAS A+ G +GTML+ +A+W Y +
Sbjct: 95 IVYLLSGTGSMLTFALLANYTGQVQVVLMGASAAIMGTIGTMLTTSLADWLEYRTSLKAK 154
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
+ + + L F + V +H+ GF G ++ IL +R ++ +
Sbjct: 155 RLQTVIFVVVLQFILDNIIPNVSFYSHLFGFIIGFVVSLIL-MRWKFSF 202
>gi|399524860|ref|ZP_10765362.1| peptidase, S54 family [Atopobium sp. ICM58]
gi|398373815|gb|EJN51650.1| peptidase, S54 family [Atopobium sp. ICM58]
Length = 292
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS---LLS 144
+ +L+ +LH GI H++ NM SL V +E G R LYL+S GGS +
Sbjct: 110 THPWTVLTGAFLHGGITHILFNMLSLYWVGRAIEPAMGRWRFLALYLVSALGGSAFIIAW 169
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
CL + + +VGASGA+FGL G A + + + +V+ +++ +NL +GF+
Sbjct: 170 CLIQPSEIFVSTVGASGAVFGLFG-------AVFVLQRLGGSDTTVILTLLGINLVYGFM 222
Query: 205 PGVDGVDNLAHIGGFASGVLLGFIL--FLRPQYGYVSEK 241
V G+ HIGG +GV ++L RP+ G +
Sbjct: 223 --VSGISWQGHIGGAIAGVAATWVLARMARPRAGVTQAQ 259
>gi|315038824|ref|YP_004032392.1| hypothetical protein LA2_08440 [Lactobacillus amylovorus GRL 1112]
gi|325957263|ref|YP_004292675.1| hypothetical protein LAC30SC_08175 [Lactobacillus acidophilus 30SC]
gi|385818055|ref|YP_005854445.1| hypothetical protein LAB52_07605 [Lactobacillus amylovorus GRL1118]
gi|312276957|gb|ADQ59597.1| hypothetical protein LA2_08440 [Lactobacillus amylovorus GRL 1112]
gi|325333828|gb|ADZ07736.1| hypothetical protein LAC30SC_08175 [Lactobacillus acidophilus 30SC]
gi|327183993|gb|AEA32440.1| hypothetical protein LAB52_07605 [Lactobacillus amylovorus GRL1118]
Length = 226
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 65 LLGPSIST--LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
LG S +T L +G + +V NQ +RL ++ +LH G++HLV N + + +E
Sbjct: 29 FLGGSENTNVLMKMGAMSNYAVVVGNQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYIEP 88
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
G AR YLL+G GG+L+S + +S GAS ALFGL G M + + N I+
Sbjct: 89 IMGHARFLVTYLLAGIGGNLMSLAFSSDRG--LSAGASTALFGLFGAMTAIGLRN--IHN 144
Query: 183 NKCTSLSVLGSVIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
+ L V+AL NL F P G+D H+GG G LL IL R Y +
Sbjct: 145 PMISFLGRQAFVLALINLGIDIFAP---GIDIWGHLGGLIVGFLLAVILGDRVMKTYNPK 201
Query: 241 KYIAAG 246
+ AG
Sbjct: 202 WRVLAG 207
>gi|433629203|ref|YP_007262831.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
gi|432160796|emb|CCK58126.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
Length = 249
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 78 GLDRNLI-----VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
GL+R L V Q YRL++S +LH G +HL++NM +L +V LE G R L
Sbjct: 59 GLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGAL 118
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y +S GGS+L ++ + GASGA+FGL G A + + + +
Sbjct: 119 YAVSALGGSVL--VYLIAPLNTATAGASGAVFGLFG-------ATFMVARRLHLDVRWVV 169
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
++I +NLAF F+ + H+GG +G L+G P+
Sbjct: 170 ALIVINLAFTFL--APAISWQGHVGGLVTGALVGATYVYAPR 209
>gi|184157269|ref|YP_001845608.1| membrane protein [Acinetobacter baumannii ACICU]
gi|332872874|ref|ZP_08440838.1| peptidase, S54 family [Acinetobacter baumannii 6014059]
gi|384130934|ref|YP_005513546.1| hypothetical protein [Acinetobacter baumannii 1656-2]
gi|384142338|ref|YP_005525048.1| hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385236635|ref|YP_005797974.1| membrane protein [Acinetobacter baumannii TCDC-AB0715]
gi|387124827|ref|YP_006290709.1| hypothetical protein ABTJ_02823 [Acinetobacter baumannii MDR-TJ]
gi|407931966|ref|YP_006847609.1| hypothetical protein M3Q_1286 [Acinetobacter baumannii TYTH-1]
gi|416148138|ref|ZP_11602187.1| uncharacterized membrane protein [Acinetobacter baumannii AB210]
gi|417570438|ref|ZP_12221295.1| peptidase, S54 family [Acinetobacter baumannii OIFC189]
gi|417577494|ref|ZP_12228339.1| peptidase, S54 family [Acinetobacter baumannii Naval-17]
gi|417869278|ref|ZP_12514270.1| membrane protein [Acinetobacter baumannii ABNIH1]
gi|417872666|ref|ZP_12517561.1| membrane protein [Acinetobacter baumannii ABNIH2]
gi|417877087|ref|ZP_12521822.1| membrane protein [Acinetobacter baumannii ABNIH3]
gi|417880727|ref|ZP_12525196.1| membrane protein [Acinetobacter baumannii ABNIH4]
gi|421202388|ref|ZP_15659539.1| membrane protein [Acinetobacter baumannii AC12]
gi|421535507|ref|ZP_15981766.1| membrane protein [Acinetobacter baumannii AC30]
gi|421631178|ref|ZP_16071867.1| peptidase, S54 family [Acinetobacter baumannii OIFC180]
gi|421689219|ref|ZP_16128903.1| peptidase, S54 family [Acinetobacter baumannii IS-143]
gi|421702790|ref|ZP_16142266.1| hypothetical protein B825_06001 [Acinetobacter baumannii ZWS1122]
gi|421706540|ref|ZP_16145953.1| hypothetical protein B837_05711 [Acinetobacter baumannii ZWS1219]
gi|421792524|ref|ZP_16228677.1| peptidase, S54 family [Acinetobacter baumannii Naval-2]
gi|424053289|ref|ZP_17790821.1| hypothetical protein W9G_01978 [Acinetobacter baumannii Ab11111]
gi|424063049|ref|ZP_17800534.1| hypothetical protein W9M_00332 [Acinetobacter baumannii Ab44444]
gi|425752479|ref|ZP_18870386.1| peptidase, S54 family [Acinetobacter baumannii Naval-113]
gi|445466290|ref|ZP_21450269.1| peptidase, S54 family [Acinetobacter baumannii OIFC338]
gi|445475306|ref|ZP_21453308.1| peptidase, S54 family [Acinetobacter baumannii Naval-78]
gi|183208863|gb|ACC56261.1| uncharacterized membrane protein [Acinetobacter baumannii ACICU]
gi|322507154|gb|ADX02608.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
gi|323517133|gb|ADX91514.1| uncharacterized membrane protein [Acinetobacter baumannii
TCDC-AB0715]
gi|332738885|gb|EGJ69748.1| peptidase, S54 family [Acinetobacter baumannii 6014059]
gi|333365145|gb|EGK47159.1| uncharacterized membrane protein [Acinetobacter baumannii AB210]
gi|342231049|gb|EGT95868.1| membrane protein [Acinetobacter baumannii ABNIH1]
gi|342233302|gb|EGT98041.1| membrane protein [Acinetobacter baumannii ABNIH2]
gi|342236447|gb|EGU00969.1| membrane protein [Acinetobacter baumannii ABNIH3]
gi|342239563|gb|EGU03962.1| membrane protein [Acinetobacter baumannii ABNIH4]
gi|347592831|gb|AEP05552.1| putative membrane protein [Acinetobacter baumannii MDR-ZJ06]
gi|385879319|gb|AFI96414.1| putative membrane protein [Acinetobacter baumannii MDR-TJ]
gi|395550886|gb|EJG16895.1| peptidase, S54 family [Acinetobacter baumannii OIFC189]
gi|395570715|gb|EJG31377.1| peptidase, S54 family [Acinetobacter baumannii Naval-17]
gi|398328343|gb|EJN44470.1| membrane protein [Acinetobacter baumannii AC12]
gi|404558599|gb|EKA63880.1| peptidase, S54 family [Acinetobacter baumannii IS-143]
gi|404669077|gb|EKB36984.1| hypothetical protein W9G_01978 [Acinetobacter baumannii Ab11111]
gi|404675051|gb|EKB42776.1| hypothetical protein W9M_00332 [Acinetobacter baumannii Ab44444]
gi|407193605|gb|EKE64761.1| hypothetical protein B825_06001 [Acinetobacter baumannii ZWS1122]
gi|407193889|gb|EKE65038.1| hypothetical protein B837_05711 [Acinetobacter baumannii ZWS1219]
gi|407900547|gb|AFU37378.1| hypothetical protein M3Q_1286 [Acinetobacter baumannii TYTH-1]
gi|408695344|gb|EKL40900.1| peptidase, S54 family [Acinetobacter baumannii OIFC180]
gi|409986349|gb|EKO42543.1| membrane protein [Acinetobacter baumannii AC30]
gi|410400104|gb|EKP52284.1| peptidase, S54 family [Acinetobacter baumannii Naval-2]
gi|425498710|gb|EKU64776.1| peptidase, S54 family [Acinetobacter baumannii Naval-113]
gi|444778101|gb|ELX02120.1| peptidase, S54 family [Acinetobacter baumannii OIFC338]
gi|444778970|gb|ELX02965.1| peptidase, S54 family [Acinetobacter baumannii Naval-78]
Length = 269
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSEL-----IANWTI 180
GSLLS L H + + VS GASGA+ G LG L+ L + +
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMG-LGAALTVLSLFPPLPHQAY 172
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+K + L ++ A+NL FG + G++N AH+GG G LL I +L
Sbjct: 173 ILDKKSLLMIM----AINLIFGLV--ATGINNAAHVGGMIMGALLALIWYLS 218
>gi|242217140|ref|XP_002474372.1| predicted protein [Postia placenta Mad-698-R]
gi|220726479|gb|EED80427.1| predicted protein [Postia placenta Mad-698-R]
Length = 328
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 73 LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
L D+ G NQ +R ++ ++LHAGIIH ++NM + M VS ++E+E G L
Sbjct: 101 LEDICGFGGFHDETPNQTFRFVTPVFLHAGIIHYLLNMLAQMTVSAQVEREMGSIFFIVL 160
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
Y+ SG G + + + SVGASGA+FG +L+A+W + T L+ L
Sbjct: 161 YMASGIFGRVNVLGGNFALVGLPSVGASGAIFGTTAIAWIDLLAHWRYHPRPGTRLAWLI 220
Query: 193 SVIALNLAFGFIP 205
+ + + GFIP
Sbjct: 221 VELIVGIGLGFIP 233
>gi|445401053|ref|ZP_21430354.1| peptidase, S54 family [Acinetobacter baumannii Naval-57]
gi|444783180|gb|ELX07042.1| peptidase, S54 family [Acinetobacter baumannii Naval-57]
Length = 269
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 26/177 (14%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H GI+HL++NM +L + E + LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGIVHLMLNMGALYIFGNVAEVLLSRSYFIILYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ G LGT L+ L +++
Sbjct: 114 VFGSLLSSYINIQNGYELLQHFDQSLLPHVSAGASGAIMG-LGTALTVL----SLFPPLP 168
Query: 186 TSLSVLGS-----VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL--RPQY 235
+ +L +A+NL FGF+ G++N AH+GG G LL I +L R Q+
Sbjct: 169 HQVRILNKKVYLVTMAINLIFGFV--ATGINNAAHVGGMIMGALLALIWYLSYRTQF 223
>gi|85858972|ref|YP_461174.1| rhomboid family protein [Syntrophus aciditrophicus SB]
gi|85722063|gb|ABC77006.1| rhomboid family protein [Syntrophus aciditrophicus SB]
Length = 289
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 54 RYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSL 113
R SF P LL PS +L LG I + + + L+S+ +LH GI+H+ NM +L
Sbjct: 77 RTSFNPLT---LLSPSNHSLFFLGATGTIPIDQYGRWWTLISASFLHGGILHIFFNMAAL 133
Query: 114 MLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSE 173
+ + E+GF R +Y ++G G LLS + G ++GAS +L GL+G +L
Sbjct: 134 SQLGTFVFHEYGFFRFLIIYTITGIAGFLLS--YAVGIP--FTIGASASLCGLIGAILFY 189
Query: 174 LIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ Y + G V+ L L FG + V G++N AH GG A+G+L GF+L
Sbjct: 190 GKSRGGFYGETIYRQAT-GWVVGLVL-FGLL--VPGINNWAHGGGLAAGILTGFLL 241
>gi|347753198|ref|YP_004860763.1| Rhomboid family protein [Bacillus coagulans 36D1]
gi|347585716|gb|AEP01983.1| Rhomboid family protein [Bacillus coagulans 36D1]
Length = 377
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + Q +RL++ +++H G +HL +N SL + +E+ +G R A +YL +G
Sbjct: 205 GAKYNPLIMEGQYWRLITPVFIHIGFMHLFMNSLSLYYIGPLVERIYGKGRFALIYLFAG 264
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
F G L S L +S GASGA+FGL G +L A ++ S SV+ ++I +
Sbjct: 265 FTGCLASFLFSPS----LSAGASGAIFGLFGALLYIGTAYRDLFFRTMGS-SVI-TLIII 318
Query: 198 NLAFGFIPGVDGVDN 212
NL FGF V G+DN
Sbjct: 319 NLVFGF--SVSGIDN 331
>gi|126644497|ref|XP_001388097.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117325|gb|EAZ51425.1| hypothetical protein cgd3_980 [Cryptosporidium parvum Iowa II]
Length = 210
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
+V++ Q +RLL S++LHA I H+V N+ + +S E ++G +Y +SG G+L
Sbjct: 16 LVKEGQVWRLLVSLFLHASIWHIVFNIIFQIRLSLSCEVKYGRILNFTIYFISGLLGNLF 75
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
S +V+VGAS + FGL+G L+ELI W NK V+ L FG
Sbjct: 76 SVAIRSSC--VVAVGASTSGFGLIGAQLAELILFWHTLQNK-------EQVVINILLFGI 126
Query: 204 I--------PGVDGVDNLAHIGGFASGVLLGFI 228
+ P +D+ HIGGF SG LG I
Sbjct: 127 LMILITWGNPS-SAIDHWGHIGGFVSGTCLGII 158
>gi|358389732|gb|EHK27324.1| hypothetical protein TRIVIDRAFT_34861 [Trichoderma virens Gv29-8]
Length = 510
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 36 CPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLS 95
CP T ++ C L ++ G G + L D + + NQ +R +
Sbjct: 235 CPNATKNTQFCPLSELCG-----------FGGDVPNPLFDG---NEHQSPAPNQWFRFII 280
Query: 96 SMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIV 155
+++HAG+IH+ N+ + + +E G R +Y+ +G G ++ + I
Sbjct: 281 PIFMHAGLIHIGFNLLMQLTIGKEMEMAIGSIRFFLVYMSAGIFGFVMGG--NYAAPGIA 338
Query: 156 SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAH 215
S GASG+LFG++ L +L+ +W + L + + ++ G +P G+DN +H
Sbjct: 339 STGASGSLFGIIALTLLDLLYSWKDRRSPVKDLLFIIIDMVISFVLGLLP---GLDNFSH 395
Query: 216 IGGFASGVLLGFILFLRPQ 234
IGGF G++LG + P
Sbjct: 396 IGGFLMGLVLGICVLHSPN 414
>gi|422566077|ref|ZP_16641716.1| peptidase, S54 family protein [Propionibacterium acnes HL082PA2]
gi|314965321|gb|EFT09420.1| peptidase, S54 family protein [Propionibacterium acnes HL082PA2]
Length = 222
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 83/175 (47%), Gaps = 25/175 (14%)
Query: 85 VRKNQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
VR + +R ++SM+ HA I H+ NM +L + LE G AR YL+SG GG L
Sbjct: 41 VRFTEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGAL 100
Query: 144 SCL--HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVI 195
CL G + I+ VGASGA+FGL G +L + S L V+
Sbjct: 101 FCLMATADGGRTILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGVSTRELWVVL 153
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
A+N A + G+ AH+GGF G++ G I F P K I AG A+
Sbjct: 154 AINAALLLF--ISGIAWQAHLGGFLVGMMCGVIFFEDP-------KRIQAGKSAQ 199
>gi|336176302|ref|YP_004581677.1| rhomboid family protein [Frankia symbiont of Datisca glomerata]
gi|334857282|gb|AEH07756.1| Rhomboid family protein [Frankia symbiont of Datisca glomerata]
Length = 377
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I ++ YRLL++ +LHAG++H++ NM +L L+ +LEQ G AR L+++ GG+ L
Sbjct: 200 IAANDEYYRLLTAAFLHAGVLHILFNMYALYLLGSQLEQILGRARYLALFVVCAIGGNTL 259
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
S L + SVGAS A+FG A + I S + ++ +NL F
Sbjct: 260 SYLIN--GWNTFSVGASTAVFGFFA-------AYYVIARRLRADTSAILIIVGINLIITF 310
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
+ +D HIGG +G+++G I Y YV +
Sbjct: 311 T--IARIDKWGHIGGLVAGLVVGVI------YAYVPAR 340
>gi|402758455|ref|ZP_10860711.1| hypothetical protein ANCT7_12245 [Acinetobacter sp. NCTC 7422]
Length = 268
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + + RL SSM+ H G+IHL++NM +L + EQ FG + LY L+G
Sbjct: 54 GADFTPLTFTGEPERLFSSMFFHFGMIHLMLNMWALYIFGSIAEQLFGRSYYVGLYFLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTM----LSELIANWTIY 181
GS+LS L H + +S GASGA+ GL + L + +
Sbjct: 114 LMGSVLSSYLSIRDGYELLQHFDPNLLPRISAGASGAVMGLGAALTVVSLFPPLPQQRFW 173
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
+K + L ++G +NL FGF V G++N AHIGG G LL
Sbjct: 174 LDKKSLLMIMG----INLIFGFT--VSGINNAAHIGGMLMGALLA 212
>gi|116748348|ref|YP_845035.1| rhomboid family protein [Syntrophobacter fumaroxidans MPOB]
gi|116697412|gb|ABK16600.1| Rhomboid family protein [Syntrophobacter fumaroxidans MPOB]
Length = 284
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
L P +L LG R I + ++ + LLS+ +LH I+H++ NM + ++ + E+
Sbjct: 84 FLSPGSRSLLLLGATGRIPIDQFDRWWTLLSASYLHGSILHILFNMMAFSQIAPLIVHEY 143
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G +R +Y LSG GG +LS V++GAS A+ GL+G L + + +
Sbjct: 144 GASRTLAIYTLSGIGGYVLSYF----AGTAVTLGASAAVCGLIGAALYYGRSRGGQFG-Q 198
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
V G VI L FGF+ G+DN AH GG +G+L GF+L GY
Sbjct: 199 LVYRQVSGWVIGL-FIFGFL--FPGIDNWAHGGGLLTGILAGFVL------GY------- 242
Query: 245 AGYDAKHRQPKYMHYQ---QLCWIIALILLV 272
+ RQP+ + ++ LC I + LV
Sbjct: 243 -----QERQPERLLHKTVGNLCVIATALTLV 268
>gi|427424498|ref|ZP_18914621.1| peptidase, S54 family [Acinetobacter baumannii WC-136]
gi|425698798|gb|EKU68431.1| peptidase, S54 family [Acinetobacter baumannii WC-136]
Length = 269
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H G++HL++NM +L + E FG LYL++G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGLVHLMLNMWALYIFGNVAESLFGRFYFICLYLIAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ GL + + +
Sbjct: 114 LFGSLLSSYMTIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFPPLPHQAYI 173
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
L ++A+NL FGF+ G++N AHIGG G L I +L YVS+
Sbjct: 174 LDKKALLMIMAINLVFGFV--ATGINNAAHIGGMIIGAFLALIWYLS----YVSK 222
>gi|421465554|ref|ZP_15914241.1| peptidase, S54 family [Acinetobacter radioresistens WC-A-157]
gi|421854845|ref|ZP_16287230.1| hypothetical protein ACRAD_02_02040 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|400203821|gb|EJO34806.1| peptidase, S54 family [Acinetobacter radioresistens WC-A-157]
gi|403189860|dbj|GAB73431.1| hypothetical protein ACRAD_02_02040 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 268
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 22/170 (12%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + + RL +SM+ H G+IHL++NM +L + EQ FG + LY+L+G
Sbjct: 52 GADYAPLTYLEEPQRLFTSMFFHFGLIHLMLNMWALYIFGSVAEQLFGRSYFIGLYVLAG 111
Query: 138 FGGSLLS---------CLHHKGKKEI---VSVGASGALFGLLGTM----LSELIANWTIY 181
GSLLS L ++ + E+ V GASGA+ GL + L ++
Sbjct: 112 LMGSLLSGYIDVQNTYSLLNQFEPELLPRVGAGASGAVMGLGAALAILSLLPVLPRQQFI 171
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
++ + L V+G LNL GF+ + G++N AHIGG G+LL + +L
Sbjct: 172 LDRKSLLLVMG----LNLGMGFM--ISGINNAAHIGGMLMGILLALLWYL 215
>gi|170756233|ref|YP_001780053.1| membrane associated peptidase [Clostridium botulinum B1 str. Okra]
gi|429244301|ref|ZP_19207768.1| membrane associated peptidase [Clostridium botulinum CFSAN001628]
gi|169121445|gb|ACA45281.1| putative membrane associated peptidase [Clostridium botulinum B1
str. Okra]
gi|428758682|gb|EKX81087.1| membrane associated peptidase [Clostridium botulinum CFSAN001628]
Length = 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 16/162 (9%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + YRL+++M+LH G+IHL +NM +L + +E FG A+ +Y +SG
Sbjct: 190 GAKVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNAIGPLVEIYFGKAKYLIIYFISG 249
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS----LSVLGS 193
+LS VS+GASGA+FG+LG L +IA Y N+ L+ + S
Sbjct: 250 ----ILSSYFSYLFSSSVSIGASGAIFGILGATL--IIA----YTNRKKGGKEFLNNIIS 299
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQY 235
VI +NL GF + VDN HIGG GV++ F+LFL Y
Sbjct: 300 VIVVNLILGF--SIPNVDNFGHIGGLIGGVIITFVLFLSDDY 339
>gi|383848356|ref|XP_003699817.1| PREDICTED: uncharacterized protein LOC100881480 [Megachile rotundata]
Length = 2095
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL ++ +LHAGIIHL + + + LE+ G RIA +Y + G+L S +
Sbjct: 1887 DQFYRLFTTTFLHAGIIHLCITLLVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIF 1946
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +GA F LL T++ E++ W + + +LS L ++ L G +P
Sbjct: 1947 VPYRAE---VGPAGAHFALLATLIVEVLHCWPMLKHPRRALSKLIFILLGLLLLGILP-- 2001
Query: 208 DGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
VDN AH+ GF G L + L +G+ +
Sbjct: 2002 -WVDNYAHLFGFIFGFLAAYALMPFISFGHYDRR 2034
>gi|328876680|gb|EGG25043.1| hypothetical protein DFA_03289 [Dictyostelium fasciculatum]
Length = 358
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 18/184 (9%)
Query: 57 FQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLV 116
F +EN ++GP + +GGL + +Q YR++ + +H GIIHL++N L+
Sbjct: 144 FASPRENKMIGPHPEAVFLVGGLVPYYVKVHHQIYRIVLPLIIHFGIIHLLINSVFLIRF 203
Query: 117 SYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIA 176
EQ + + ++LL+ G SLL+ KG +++ GASG++ G +G ++ E
Sbjct: 204 CVITEQRWKWRWTLLVFLLTDIGASLLAMNAPKG-YNVLTSGASGSICGFIGAVMCE--- 259
Query: 177 NWTIYA----NKCTSLSVLGSVI---ALNLAFGFIPGVD-GVDNLAHIGGFASGVLLGFI 228
T +A +K + LGS+I A+ L +PG G H+GGF SGVLLG
Sbjct: 260 --TFFAREEMSKVSRYYTLGSLIFSMAVCLILSSLPGYSLG----GHLGGFISGVLLGGA 313
Query: 229 LFLR 232
+F+R
Sbjct: 314 IFIR 317
>gi|170593681|ref|XP_001901592.1| Rhomboid family protein [Brugia malayi]
gi|158590536|gb|EDP29151.1| Rhomboid family protein [Brugia malayi]
Length = 1013
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQK---YRLLSSMWLHAGIIHLVVNMTSLMLVSY 118
EN L +S L ++ G+ +RK+Q YRL ++LHAGIIH ++ + +L
Sbjct: 778 ENATLCSQVSCLSEVCGM--LPFLRKDQPDQWYRLFIPLFLHAGIIHCILTIFIQILYMR 835
Query: 119 RLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANW 178
LE+ G+ARIA LY++SG GG L + + E VG +G+ G+ M +++ +W
Sbjct: 836 DLEKLLGWARIALLYMVSGVGGYLAGAIFVPYRPE---VGPAGSHVGMFAAMYVDVLYSW 892
Query: 179 TIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
+ ++ L G +P VDN AH+ GF G+L+
Sbjct: 893 NLLERPWHAVVQLSLFTLALFTIGTLP---WVDNWAHLFGFIFGILIS 937
>gi|227904420|ref|ZP_04022225.1| Rhomboid family protein [Lactobacillus acidophilus ATCC 4796]
gi|227867795|gb|EEJ75216.1| Rhomboid family protein [Lactobacillus acidophilus ATCC 4796]
Length = 226
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 15/175 (8%)
Query: 68 PSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFA 127
+++ L +G ++ +V +Q +RL ++ +LH G++HLV N + + +E G
Sbjct: 34 ENVNVLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYMEPIMGHT 93
Query: 128 RIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS 187
R YLL+ GG+L+S + +S GAS ALFGL G M + + N+ +
Sbjct: 94 RFLVTYLLAEIGGNLMSLAFSADRG--LSAGASTALFGLFGAMTAIGLRNF-----RNPM 146
Query: 188 LSVLGS---VIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
+S LG V+AL NLA F+P G+D HIGG +G LL IL R Y
Sbjct: 147 ISYLGRQALVLALINLALDIFVP---GIDIWGHIGGLIAGFLLAIILGDRVMKTY 198
>gi|359429414|ref|ZP_09220440.1| putative rhomboid family protein [Acinetobacter sp. NBRC 100985]
gi|358235264|dbj|GAB01979.1| putative rhomboid family protein [Acinetobacter sp. NBRC 100985]
Length = 268
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 92/184 (50%), Gaps = 28/184 (15%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + + RL SSM+ H G+IHL++NM +L + EQ FG + +Y L+G
Sbjct: 54 GADFTPLTFSGEPERLFSSMFFHFGLIHLMLNMWALYIFGSVAEQLFGRSYYIGMYFLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSEL-----IANWTI 180
GS+LS L H + +S GASGA+ G LG L+ + +
Sbjct: 114 LMGSVLSSYLSIRDGYQLLQHFDPSLLPHISAGASGAVMG-LGAALTAVSLFPALPRQRF 172
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
+ +K + L V+A+NL FGF V GV+N AHIGG G LL + + +G ++
Sbjct: 173 WLDKKS----LVMVMAINLIFGFT--VSGVNNAAHIGGMIMGALLASLWY----FGQKTQ 222
Query: 241 KYIA 244
+ +A
Sbjct: 223 RKVA 226
>gi|339441829|ref|YP_004707834.1| hypothetical protein CXIVA_07650 [Clostridium sp. SY8519]
gi|338901230|dbj|BAK46732.1| hypothetical protein CXIVA_07650 [Clostridium sp. SY8519]
Length = 218
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G + + + + YRLL+S +LH GI HLV NM L + LE+ FG + A Y
Sbjct: 54 GAMYPDAVFDSGEWYRLLTSSFLHFGISHLVNNMVMLFCLGSYLEKAFGRIKYAVFYAAV 113
Query: 137 GFGGSLLSCLHH-KGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN----KCTSLSVL 191
SL S + VS GASGA+FG++G +L W I N + L
Sbjct: 114 CVFSSLASSWWMLQQDSPAVSGGASGAIFGIIGALL------WIILRNHGRFRDMDLRRF 167
Query: 192 GSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
++AL+L +GF VDN AHIGG G LLG ++ R
Sbjct: 168 LIMLALSLYYGFTTA--DVDNAAHIGGLIFGFLLGILMAPR 206
>gi|396586115|ref|ZP_10486089.1| peptidase, S54 family [Actinomyces sp. ICM47]
gi|395546456|gb|EJG14095.1| peptidase, S54 family [Actinomyces sp. ICM47]
Length = 241
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 26/192 (13%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS---LLS 144
++ + +L+ +LH G++H++ NM SL V +E G+ R +YLLS GGS L
Sbjct: 59 SRPWTILTGAFLHGGLLHILFNMLSLYWVGRAIEPVLGWWRFLTVYLLSALGGSAFILAW 118
Query: 145 CLHHKGKKEIVSVGASGALFGLLGT--MLSELIANWTIYANKCTSLSVLGSVIALNLAFG 202
CL + + +VGASGA+FGL G +L L A+ L++LG +NL +G
Sbjct: 119 CLIQPSELLVGTVGASGAVFGLFGAVFVLQRLGG-----ADTTPILTLLG----INLVYG 169
Query: 203 FIPGVDGVDNLAHIGGFASGVLLGFIL--FLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQ 260
F+ G+ AHIGG GV ++L RP+ G ++E A++R+ +
Sbjct: 170 FL--ASGISWQAHIGGAVVGVAATWVLARLARPRAG-ITEA-------AQNRRQLLVALG 219
Query: 261 QLCWIIALILLV 272
+ I+AL LV
Sbjct: 220 MIAGIVALNALV 231
>gi|256843575|ref|ZP_05549063.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256850051|ref|ZP_05555481.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262047339|ref|ZP_06020296.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|293381863|ref|ZP_06627832.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|423319243|ref|ZP_17297119.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|423320787|ref|ZP_17298659.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
gi|256614995|gb|EEU20196.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256713023|gb|EEU28014.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260572313|gb|EEX28876.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|290921584|gb|EFD98617.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|405589376|gb|EKB62943.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|405599039|gb|EKB72221.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
Length = 228
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 66 LGPSIST--LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LG S +T L +G ++ +V +Q +RL ++ +LH GI+HLV N + + +E
Sbjct: 32 LGGSENTNVLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGIMHLVSNAIIIYYMGQYMEPL 91
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R YLL+G GG+L+S + +S GAS ALFGL G M + + N ++
Sbjct: 92 MGHVRFLVTYLLAGVGGNLMSLAFSADRG--LSAGASTALFGLFGAMTAIGLRN--LHNP 147
Query: 184 KCTSLSVLGSVIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
L V+AL NLA F+P G+D HIGG +G LL IL R Y
Sbjct: 148 MIAFLGRQAFVLALINLALDIFVP---GIDIWGHIGGLIAGFLLAIILGDRVMKTY 200
>gi|221056004|ref|XP_002259140.1| rhomboid family protein [Plasmodium knowlesi strain H]
gi|193809211|emb|CAQ39913.1| rhomboid family protein, putative [Plasmodium knowlesi strain H]
Length = 276
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
L PS S L LG + +++ + +RL+ ++LHA I H N+ + + + LE+ +
Sbjct: 76 FLTPSDSFLITLGA-NVASKIKQGEIHRLVLPIFLHANIFHTFFNVFFQLRMGFTLEKNY 134
Query: 125 GFARIAPLYLLSGFGGSLL-SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI--Y 181
G +I LY L+G G++L SC+ + K VGAS + GLLG + SELI W + +
Sbjct: 135 GIVKIIILYFLTGIYGNMLSSCVTYCPIK----VGASTSGMGLLGVVTSELILLWHVIRH 190
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
+ + S+I+ F F +DN+ H+GG SG+ +G
Sbjct: 191 RERVVFNIIFFSLISFFYYFTF--NGSNIDNVGHLGGLLSGISMG 233
>gi|418995635|ref|ZP_13543249.1| rhomboid family protein [Escherichia coli DEC1A]
gi|377849025|gb|EHU14001.1| rhomboid family protein [Escherichia coli DEC1A]
Length = 199
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 7/140 (5%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG-FGGSLLSC 145
+ +RLLSS++LH+ HL++NM +L+ V E+ G R+ ++L SG FGG + +C
Sbjct: 58 SGEPWRLLSSVFLHSSFSHLLMNMFALLAVGTVAERILGKWRLLIIWLFSGIFGGLISAC 117
Query: 146 LHHKGKKEIV-SVGASGALFGLLGTMLSELIAN--WTIYANKCTSLSVLGSVIALNLAFG 202
+ ++IV SVGASGA+ G+ G ++ +A+ T + N+ +LG ++AL L +G
Sbjct: 118 YALRESEQIVISVGASGAIMGIAGAAIATQLASGAGTHHKNQRRVFPLLG-MVALTLLYG 176
Query: 203 FIPGVDGVDNLAHIGGFASG 222
G+DN HIGG +G
Sbjct: 177 --TRQTGIDNACHIGGLIAG 194
>gi|374995763|ref|YP_004971262.1| hypothetical protein Desor_3244 [Desulfosporosinus orientis DSM
765]
gi|357214129|gb|AET68747.1| putative membrane protein [Desulfosporosinus orientis DSM 765]
Length = 316
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +R +SM++H G +HL N+ +L ++ E+ FG R +YLLSG
Sbjct: 166 GAKVNSLILAGEVWRFFTSMFIHIGYLHLGFNLYALWVLGPFTEKLFGHWRFLVIYLLSG 225
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML-SELIANWTIYANKCTSLSVLGSVIA 196
GGS+ S G +S GASGA+FGLLG +L L W + +L V+
Sbjct: 226 LGGSIASFFFTSG----LSAGASGAIFGLLGALLYYSLKRPWLWKSGLGMNL-----VLV 276
Query: 197 LNLAFGFIPGVDGVDNLAH 215
L + FGF G+DN AH
Sbjct: 277 LVINFGFGLTQPGIDNFAH 295
>gi|449479129|ref|XP_002195482.2| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2
[Taeniopygia guttata]
Length = 818
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+Q YRL S++LHAGIIH +V++T M V LE+ G+ RI+ +++LSG G+L S +
Sbjct: 614 DQFYRLWLSLFLHAGIIHCLVSVTFQMTVLRDLEKLAGWHRISIIFILSGITGNLASAIF 673
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FGLL + EL +W + + L ++ G +P
Sbjct: 674 LPYRAE---VGPAGSQFGLLACLFVELFQSWQVLEKPWKAFLNLFGIVLFLFICGLLP-- 728
Query: 208 DGVDNLAH 215
+DN+AH
Sbjct: 729 -WIDNIAH 735
>gi|344175988|emb|CCA87141.1| putative rhomboid protease [Ralstonia syzygii R24]
Length = 543
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 85/170 (50%), Gaps = 7/170 (4%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
LL I L LGG + V+ + +RLLS+ +LHAG++HLV+N+ L +E+ +
Sbjct: 203 LLQTPIDVLFKLGG-NAAFEVQHGEWWRLLSATFLHAGVLHLVINVIGLYATGIAVERIY 261
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G A +YL +G GS LS + + VGASGA+FG+ G L +
Sbjct: 262 GPAAYLLIYLGAGLLGSALSLSF--AAQHAIGVGASGAVFGVAGAWLVAICRYRGQMPAT 319
Query: 185 CTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ L+ LG + +L G GVDN AHIGG G +L IL R
Sbjct: 320 LSKRLLTQLGMFVLYSLVQGLTK--PGVDNAAHIGGLVGGCMLALILPAR 367
>gi|255319136|ref|ZP_05360354.1| peptidase, S54 family [Acinetobacter radioresistens SK82]
gi|262379268|ref|ZP_06072424.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303782|gb|EET82981.1| peptidase, S54 family [Acinetobacter radioresistens SK82]
gi|262298725|gb|EEY86638.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 268
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 22/170 (12%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + + RL +SM+ H G+IHL++NM +L + EQ FG + LY+L+G
Sbjct: 52 GADYAPLTYLEEPQRLFTSMFFHFGLIHLMLNMWALYIFGSVAEQLFGRSYFIGLYVLAG 111
Query: 138 FGGSLLS---------CLHHKGKKEI---VSVGASGALFGLLGTM----LSELIANWTIY 181
GSLLS L ++ E+ V GASGA+ GL + L ++
Sbjct: 112 LMGSLLSGYIDVQNTYSLLNQFDPELLPRVGAGASGAVMGLGAALAILSLLPVLPRQQFI 171
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
++ + L V+G LNL GF+ + G++N AHIGG G+LL + +L
Sbjct: 172 LDRKSLLLVMG----LNLGMGFM--ISGINNAAHIGGMMMGILLALLWYL 215
>gi|350568870|ref|ZP_08937268.1| membrane spanning protein [Propionibacterium avidum ATCC 25577]
gi|348661113|gb|EGY77809.1| membrane spanning protein [Propionibacterium avidum ATCC 25577]
Length = 300
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 18/156 (11%)
Query: 88 NQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
++ +R ++SM+ HA I+H+ NM +L + LE G AR YL+SG GG +L CL
Sbjct: 122 HEPWRFVTSMFGHALSILHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGVLFCL 181
Query: 147 ----HHKGK----KEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
H G+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 182 MASPHGDGRFLPNMNDGVVGASGAIFGLFGVLL-------IVQRRLGASTRDLWIVLAIN 234
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
A F + G+ AH+GGF G+ G I F P+
Sbjct: 235 AALLFF--ISGIAWQAHLGGFIVGLACGVIFFEDPK 268
>gi|336053788|ref|YP_004562075.1| hypothetical protein WANG_0278 [Lactobacillus kefiranofaciens ZW3]
gi|333957165|gb|AEG39973.1| possible membrane protein [Lactobacillus kefiranofaciens ZW3]
Length = 226
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 17/171 (9%)
Query: 66 LGPSIST--LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
LG S +T L +G + +V Q +RL ++ +LH G++HLV N + + +E
Sbjct: 30 LGGSENTNVLMKMGAMSNFAVVVGQQWWRLFTAQFLHIGVMHLVSNAVIIYYMGLYMEPL 89
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R YLL+G GG+LLS G +S GAS ALFGL G M + + N
Sbjct: 90 MGHWRFLATYLLAGIGGNLLSLAF--GSDRGLSAGASTALFGLFGAMTAIGLRN-----M 142
Query: 184 KCTSLSVLGS---VIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ +S LG V+AL NLA F+P G+D H+GG SG LL I+
Sbjct: 143 RNPMISYLGRQAFVLALINLALDLFVP---GIDIWGHLGGLISGFLLAIIM 190
>gi|401403695|ref|XP_003881541.1| Rhomboid family 1 (Predicted), related [Neospora caninum Liverpool]
gi|325115954|emb|CBZ51508.1| Rhomboid family 1 (Predicted), related [Neospora caninum Liverpool]
Length = 264
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 12/139 (8%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH 148
Q +R+++ ++LHA I+HLV+N+ ++ +S RLE+ +G + Y S G+LLS L
Sbjct: 82 QLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTKKFLATYFFSAIVGNLLSMLVQ 141
Query: 149 KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL----SVLGSVIALNLAFGFI 204
+SVGAS A FG++G + +EL A W + + + L +V+ L+FG
Sbjct: 142 PWA---LSVGASTAGFGVVGGLTAELSAVWGKLSEELKQMYSFDVCLLAVLIYFLSFG-- 196
Query: 205 PGVDGVDNLAHIGGFASGV 223
VD H+GGF +GV
Sbjct: 197 ---RTVDTYGHLGGFLAGV 212
>gi|386725483|ref|YP_006191809.1| hypothetical protein B2K_25730 [Paenibacillus mucilaginosus K02]
gi|384092608|gb|AFH64044.1| hypothetical protein B2K_25730 [Paenibacillus mucilaginosus K02]
Length = 383
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N + + + +R ++ ++LH G +HL N+T+L+ + RLE+ G R A YLL+G
Sbjct: 229 GAKYNPYIDRGEYWRWITPIFLHIGGLHLWFNLTALLSLGGRLERGIGSLRFALFYLLAG 288
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
G++ S +S GASGA+FGL+G +L I + ++ + +++ G + +
Sbjct: 289 IAGNIASYTFSPS----ISAGASGAIFGLMGVLLVLSIMDPDLWG-ESGGMAIWGG-LGM 342
Query: 198 NLAFGFIPGVDGVDNLAH 215
N+ GFI V G+DN AH
Sbjct: 343 NVVLGFI--VPGIDNYAH 358
>gi|257079952|ref|ZP_05574313.1| membrane-associated serine protease [Enterococcus faecalis JH1]
gi|294779541|ref|ZP_06744936.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
PC1.1]
gi|307269340|ref|ZP_07550690.1| peptidase, S54 family protein [Enterococcus faecalis TX4248]
gi|307289776|ref|ZP_07569713.1| peptidase, S54 family protein [Enterococcus faecalis TX0411]
gi|397700974|ref|YP_006538762.1| rhomboid family protein [Enterococcus faecalis D32]
gi|256987982|gb|EEU75284.1| membrane-associated serine protease [Enterococcus faecalis JH1]
gi|294453420|gb|EFG21827.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
PC1.1]
gi|306499161|gb|EFM68639.1| peptidase, S54 family protein [Enterococcus faecalis TX0411]
gi|306514339|gb|EFM82904.1| peptidase, S54 family protein [Enterococcus faecalis TX4248]
gi|397337613|gb|AFO45285.1| rhomboid family protein [Enterococcus faecalis D32]
Length = 236
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 52 LGRYSFQPWKENYLLGPSISTLRDL---------------GGLDRNLIVRKNQKYRLLSS 96
L R QP+ LLG SI L G + R L+ + ++ +R ++
Sbjct: 9 LNRLKNQPFITYALLGISIIVFLGLELTGGSENILNLVNWGAMVRPLVAQNHEYWRFITP 68
Query: 97 MWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVS 156
M+LH G +H+++NM +L + ++E +G R +YLLSG G++ S G VS
Sbjct: 69 MFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLSGIAGNIASFAF--GTPNSVS 126
Query: 157 VGASGALFGLLGTMLSELIANWTIYANKCTSLSV--LGSVIALNLAFGFIPGVDGVDNLA 214
GAS ALFGL G +I N V I +NL F VD +
Sbjct: 127 AGASTALFGLFGAF---VILGRHFRDNPAIMYMVQRYSMFIVINLLFNLFS--SSVDMMG 181
Query: 215 HIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAKHRQPKYMHYQQLCWIIALILLVL 273
H+GG G+L +A + +R+ + ++++ + I LV+
Sbjct: 182 HVGGLIGGLL------------------VATAFAVPNREEAFNKHERIMATLIFIFLVV 222
>gi|377809821|ref|YP_005005042.1| rhomboid family protein [Pediococcus claussenii ATCC BAA-344]
gi|361056562|gb|AEV95366.1| rhomboid family protein [Pediococcus claussenii ATCC BAA-344]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 16/176 (9%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+I+ L G + I + + + +SM++H GI HLV+NM +L + LE G +
Sbjct: 40 NINNLIRYGAMVPESIKNGSDYFSIFASMFIHIGIEHLVLNMVTLYFLGRILEAIMGHWK 99
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTS- 187
YLL+G G+L+S + + +S GASGA+FG++G W + A S
Sbjct: 100 FLATYLLAGVFGNLVSL--YFANPQTISAGASGAIFGIIGV--------WLMLAITFRSV 149
Query: 188 --LSVLGSVIALNLAFGFIPGVDG--VDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
L+ +G + + G I G G VD AH+GG +G LLGFI+ P+ G +S
Sbjct: 150 PYLAQMGQQMLIFTILGLIGGFLGPDVDIAAHLGGVLAGFLLGFIIGF-PKIGKIS 204
>gi|268534400|ref|XP_002632331.1| C. briggsae CBR-ROM-4 protein [Caenorhabditis briggsae]
Length = 709
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLE 121
EN L ++ + G+ NQ YRL +S+++HAGIIHL +++ V LE
Sbjct: 411 ENATLCSQVNCFAGVCGMMPFFGAYPNQFYRLFTSLFIHAGIIHLALSVGFQWWVMRDLE 470
Query: 122 QEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIY 181
G R+A LY SG GG+L S + +VG S AL G++ ++ +L +
Sbjct: 471 FMIGSKRMAILYFCSGIGGNLASAIFVPFNP---AVGPSSALCGVMAAVVVDLYHHRQEM 527
Query: 182 ANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
+L VI + LAFG IP +DN AH+ G G L I+F
Sbjct: 528 VEFSCALYQQLFVICVYLAFGLIP---WIDNWAHLFGSIFGFLATIIIF 573
>gi|414867423|tpg|DAA45980.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 139
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQ-----CVLRDILGRYSFQPWKEN 63
+W WL P++ V I++F M+VNNCPA A S + CV R L R+SFQP EN
Sbjct: 36 REWVPWLVPLVVAVNIVLFAVAMYVNNCPAHAASSRRGGAGSCVARGFLHRFSFQPLSEN 95
Query: 64 YLLGPSIST 72
LLGPS +T
Sbjct: 96 PLLGPSSAT 104
>gi|366053016|ref|ZP_09450738.1| membrane-associated serine protease [Lactobacillus suebicus KCTC
3549]
Length = 223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G ++++ Q +RL++ ++LH G++HLVVN ++ + ++E FG AR +Y +S
Sbjct: 43 GAKVGTLIQEGQWWRLITPVFLHIGLMHLVVNSVTVYYIGTQIENMFGHARFLSIYFVSA 102
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGT--MLSELIANWTIYAN---KCTSLSVLG 192
G+L S + +S GAS A+FGL G ML E + + N + S L
Sbjct: 103 LTGNLASFVFLPNS---LSAGASTAIFGLFGAFLMLGE-----SFHHNPYIRLLSRQFL- 153
Query: 193 SVIALNLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVS 239
+ +A+NL F F+P G+D H+GG G L+G+++ PQ G ++
Sbjct: 154 TFVAINLVFDLFMP---GIDIYGHLGGLVGGFLMGYVVG-TPQIGKIN 197
>gi|111226097|ref|YP_716891.1| hypothetical protein FRAAL6764 [Frankia alni ACN14a]
gi|111153629|emb|CAJ65387.1| Hypothetical protein; putative membrane protein [Frankia alni
ACN14a]
Length = 252
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I +Q YRLL++ +LHAG++H++ NM +L L+ ++LE G AR L++ GG+ L
Sbjct: 84 IAADDQYYRLLTAAFLHAGVLHILFNMYALYLLGFQLEAILGRARYLGLFVAGAVGGNTL 143
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
S L G SVGAS A+F + + + + L VLG I L + F F
Sbjct: 144 SYL--LGGLSTASVGASTAIFAFFA---AYYVIARRLRVDSRQILVVLG--INLLITFSF 196
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
+D H+GG A+GV++G I Y YV +
Sbjct: 197 ----SNIDKWGHLGGLAAGVIVGLI------YAYVPPR 224
>gi|375133886|ref|YP_004994536.1| peptidase, S54 (rhomboid) family [Acinetobacter calcoaceticus
PHEA-2]
gi|325121331|gb|ADY80854.1| peptidase, S54 (rhomboid) family [Acinetobacter calcoaceticus
PHEA-2]
Length = 269
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H G++HL++NM +L + E FG LYL++G
Sbjct: 54 GADFTPLTFTGQPERLFTSMFFHFGLVHLMLNMWALYIFGNVAESLFGRFYFICLYLITG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ GL + + +
Sbjct: 114 LFGSLLSSYMTIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFPPLPHQAYI 173
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
L V+A+NL FGF+ G++N AHIGG G L + +L YVS+
Sbjct: 174 LDKKALLMVMAINLVFGFV--ATGINNAAHIGGMIIGAFLALMWYLS----YVSK 222
>gi|299771114|ref|YP_003733140.1| hypothetical protein AOLE_14400 [Acinetobacter oleivorans DR1]
gi|298701202|gb|ADI91767.1| hypothetical protein AOLE_14400 [Acinetobacter oleivorans DR1]
Length = 269
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H G++HL++NM +L + E FG +YLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGLVHLMLNMWALYIFGNVAESLFGRFYFVGMYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ GL + + +
Sbjct: 114 LFGSLLSSYMTIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFPPLPHQAYI 173
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
L ++A+NL FGF+ G++N AHIGG G L + +L YVS+
Sbjct: 174 LDKKALIMIMAINLIFGFV--ATGINNAAHIGGMVIGAFLALMWYLS----YVSK 222
>gi|322797669|gb|EFZ19678.1| hypothetical protein SINV_10168 [Solenopsis invicta]
Length = 357
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 7/181 (3%)
Query: 62 ENYLLGPSISTLRDLGGLDRNLIVR-KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRL 120
E L + L D+ G+ L +Q YRL ++++LHAGI+HL++ + + L
Sbjct: 122 EEASLCSQVECLHDVCGMIPFLHPEWPDQFYRLFTTIFLHAGIVHLIITLLIQYFLMRDL 181
Query: 121 EQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTI 180
E+ G RIA +Y + G+L S + + E VG +GA F LL T++ E++ W +
Sbjct: 182 EKLTGSLRIALIYFIGALAGNLASAIFVPYRAE---VGPAGAHFALLATLVVEVLHCWPM 238
Query: 181 YANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
+ +LS L ++ L G +P +DN AH+ GF G L + L +G+
Sbjct: 239 LKHPRRTLSKLILILLGLLVLGILP---WIDNYAHLFGFIFGFLAAYALMPFISFGHYDR 295
Query: 241 K 241
+
Sbjct: 296 R 296
>gi|84497160|ref|ZP_00995982.1| membrane spanning protein [Janibacter sp. HTCC2649]
gi|84382048|gb|EAP97930.1| membrane spanning protein [Janibacter sp. HTCC2649]
Length = 260
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 80/167 (47%), Gaps = 26/167 (15%)
Query: 87 KNQKYRLLSSMWLHA--GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS--- 141
Q +R L+S + HA +H+ NM +L ++ LE G AR A LYL+S FGGS
Sbjct: 67 DTQPWRFLTSAFAHAPNNFLHIGFNMWALWMMGQYLEPMLGRARFAALYLISAFGGSVVY 126
Query: 142 LLSCLHHK---------GKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG 192
LL H G E +VGASGA+FGL G L + S + +
Sbjct: 127 LLLAFPHSIAQLNNRDYGPWETAAVGASGAVFGLFGAFL-------ILQRRLGRSAATMY 179
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFI---LFLRPQYG 236
+ IA+N GF+ V G+ AH+GGF G+ + L RP+ G
Sbjct: 180 ATIAINAVIGFV--VPGIAWQAHLGGFLVGIACAAVFAYLGKRPEVG 224
>gi|335357178|ref|ZP_08549048.1| rhomboid family integral membrane protein [Lactobacillus animalis
KCTC 3501]
Length = 224
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + + +RL + M++H G+ HL +N+ +L + +LEQ FG R LYL+SG
Sbjct: 41 GAKYNPLIIQGELWRLFTPMFIHIGLEHLALNLLTLYFLGVQLEQLFGKWRFLALYLISG 100
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGT--MLSELIANWTIYANKCTSLSVLGSVI 195
GG++LS +S GAS +LFGL G ML E VL I
Sbjct: 101 VGGNILSF----ALSNNISAGASTSLFGLFGAYLMLGESFRQNQYIRMISRQFLVL---I 153
Query: 196 ALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
LNL F G G+D H+GG +G L
Sbjct: 154 VLNLGFDLFAG--GIDIWGHLGGLLAGFL 180
>gi|395203124|ref|ZP_10394358.1| membrane spanning protein [Propionibacterium humerusii P08]
gi|422441685|ref|ZP_16518494.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA3]
gi|422473010|ref|ZP_16549491.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA2]
gi|422573292|ref|ZP_16648854.1| peptidase, S54 family protein [Propionibacterium acnes HL044PA1]
gi|313835668|gb|EFS73382.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA2]
gi|314928339|gb|EFS92170.1| peptidase, S54 family protein [Propionibacterium acnes HL044PA1]
gi|314970269|gb|EFT14367.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA3]
gi|328908078|gb|EGG27837.1| membrane spanning protein [Propionibacterium humerusii P08]
Length = 302
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 88 NQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R ++SM+ HA I H+ NM +L + LE G AR YL+SG GG L CL
Sbjct: 124 TEPWRFVTSMFGHALNIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCL 183
Query: 147 --HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
G I+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 184 MATTNGNGTILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGASTRDLWVVLAIN 236
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
A F + G+ AH+GGF G++ G I F P+
Sbjct: 237 AALLFF--ISGIAWQAHLGGFLVGMVCGIIFFEDPK 270
>gi|148271189|ref|YP_001220750.1| hypothetical protein CMM_0011 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829119|emb|CAN00017.1| conserved membrane protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 287
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 15/147 (10%)
Query: 89 QKYRLLSSMWLHA--GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R+L+S + H+ I+H+V NM S+ + LE G AR L+L+S GGSL +
Sbjct: 118 EPWRMLTSAFTHSPDSILHIVFNMLSVFVFGRVLEPMLGRARFLALFLISALGGSLAVEV 177
Query: 147 HHKGKKEIVS--VGASGALFGLLGTMLSELIANWTIYANKC-TSLSVLGSVIALNLAFGF 203
E + VGASGA+FGL+G + + A K ++ L +IA+NL GF
Sbjct: 178 IGSAMGEPLQAVVGASGAIFGLMG--------GYFVLARKLGGNVGPLLGIIAINLLLGF 229
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILF 230
+ V GV AH+GG +G L+ +L
Sbjct: 230 V--VQGVSWQAHVGGLVTGALVALVLL 254
>gi|217972131|ref|YP_002356882.1| rhomboid family protein [Shewanella baltica OS223]
gi|217497266|gb|ACK45459.1| Rhomboid family protein [Shewanella baltica OS223]
Length = 360
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
L + ++ + + L S M+LH ++HL NM L +V LE G AR LYL+ G
Sbjct: 183 ALRADDVMHGSHVWTLFSHMFLHGDLMHLAGNMYFLYVVGDNLEDALGRARFFVLYLVCG 242
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML-----SELIANWTIYANKCTSLSVLG 192
F + G I VGASGA+ GL G L + L + IY K + ++
Sbjct: 243 FAAAATQIAADPGSN-IYMVGASGAIAGLFGMYLMWFRHASLTFMFIIYQKKLSPMAFFS 301
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ N+ G I +GV AHIGGF +G+L+G L
Sbjct: 302 IWLVFNI-IGLIMAGEGVAYWAHIGGFVAGLLMGIFL 337
>gi|29377262|ref|NP_816416.1| small hydrophobic molecule transporter protein [Enterococcus
faecalis V583]
gi|227554271|ref|ZP_03984318.1| S54 family peptidase [Enterococcus faecalis HH22]
gi|229544828|ref|ZP_04433553.1| S54 family peptidase [Enterococcus faecalis TX1322]
gi|229549095|ref|ZP_04437820.1| S54 family peptidase [Enterococcus faecalis ATCC 29200]
gi|256616711|ref|ZP_05473557.1| membrane-associated serine protease [Enterococcus faecalis ATCC
4200]
gi|256854083|ref|ZP_05559448.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256960966|ref|ZP_05565137.1| membrane-associated serine protease [Enterococcus faecalis Merz96]
gi|257081651|ref|ZP_05576012.1| membrane-associated serine protease [Enterococcus faecalis E1Sol]
gi|257084247|ref|ZP_05578608.1| membrane-associated serine protease [Enterococcus faecalis Fly1]
gi|257087753|ref|ZP_05582114.1| membrane-associated serine protease [Enterococcus faecalis D6]
gi|257091025|ref|ZP_05585386.1| membrane-associated serine protease [Enterococcus faecalis CH188]
gi|257420174|ref|ZP_05597168.1| membrane-associated serine protease [Enterococcus faecalis T11]
gi|257421601|ref|ZP_05598591.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|293382447|ref|ZP_06628382.1| rhomboid family protein [Enterococcus faecalis R712]
gi|293387169|ref|ZP_06631730.1| rhomboid family protein [Enterococcus faecalis S613]
gi|300860492|ref|ZP_07106579.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
TUSoD Ef11]
gi|307276144|ref|ZP_07557275.1| peptidase, S54 family protein [Enterococcus faecalis TX2134]
gi|307286868|ref|ZP_07566950.1| peptidase, S54 family protein [Enterococcus faecalis TX0109]
gi|312900482|ref|ZP_07759784.1| peptidase, S54 family protein [Enterococcus faecalis TX0470]
gi|312904732|ref|ZP_07763881.1| peptidase, S54 family protein [Enterococcus faecalis TX0635]
gi|312906502|ref|ZP_07765504.1| peptidase, S54 family protein [Enterococcus faecalis DAPTO 512]
gi|312910446|ref|ZP_07769292.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
DAPTO 516]
gi|312951098|ref|ZP_07770003.1| peptidase, S54 family protein [Enterococcus faecalis TX0102]
gi|384514113|ref|YP_005709206.1| rhomboid family protein [Enterococcus faecalis OG1RF]
gi|384519578|ref|YP_005706883.1| rhomboid family protein [Enterococcus faecalis 62]
gi|421512726|ref|ZP_15959525.1| GlpG protein (membrane protein of glp regulon) [Enterococcus
faecalis ATCC 29212]
gi|422684496|ref|ZP_16742732.1| peptidase, S54 family protein [Enterococcus faecalis TX4000]
gi|422690193|ref|ZP_16748251.1| peptidase, S54 family protein [Enterococcus faecalis TX0630]
gi|422691144|ref|ZP_16749183.1| peptidase, S54 family protein [Enterococcus faecalis TX0031]
gi|422693799|ref|ZP_16751805.1| peptidase, S54 family protein [Enterococcus faecalis TX4244]
gi|422697513|ref|ZP_16755449.1| peptidase, S54 family protein [Enterococcus faecalis TX1346]
gi|422699619|ref|ZP_16757482.1| peptidase, S54 family protein [Enterococcus faecalis TX1342]
gi|422702192|ref|ZP_16760030.1| peptidase, S54 family protein [Enterococcus faecalis TX1302]
gi|422706114|ref|ZP_16763819.1| peptidase, S54 family protein [Enterococcus faecalis TX0043]
gi|422709156|ref|ZP_16766669.1| peptidase, S54 family protein [Enterococcus faecalis TX0027]
gi|422712654|ref|ZP_16769417.1| peptidase, S54 family protein [Enterococcus faecalis TX0309A]
gi|422716503|ref|ZP_16773207.1| peptidase, S54 family protein [Enterococcus faecalis TX0309B]
gi|422719592|ref|ZP_16776223.1| peptidase, S54 family protein [Enterococcus faecalis TX0017]
gi|422723419|ref|ZP_16779955.1| peptidase, S54 family protein [Enterococcus faecalis TX2137]
gi|422726049|ref|ZP_16782504.1| peptidase, S54 family protein [Enterococcus faecalis TX0312]
gi|422731124|ref|ZP_16787499.1| peptidase, S54 family protein [Enterococcus faecalis TX0645]
gi|422734025|ref|ZP_16790322.1| peptidase, S54 family protein [Enterococcus faecalis TX1341]
gi|422738373|ref|ZP_16793570.1| peptidase, S54 family protein [Enterococcus faecalis TX2141]
gi|424672612|ref|ZP_18109567.1| peptidase, S54 family [Enterococcus faecalis 599]
gi|424755744|ref|ZP_18183600.1| peptidase, S54 family [Enterococcus faecalis R508]
gi|428767934|ref|YP_007154045.1| small hydrophobic molecule transporter protein, putative
[Enterococcus faecalis str. Symbioflor 1]
gi|430359105|ref|ZP_19425721.1| membrane-associated serine protease [Enterococcus faecalis OG1X]
gi|430370856|ref|ZP_19429263.1| membrane-associated serine protease [Enterococcus faecalis M7]
gi|29344728|gb|AAO82486.1| small hydrophobic molecule transporter protein, putative
[Enterococcus faecalis V583]
gi|227176561|gb|EEI57533.1| S54 family peptidase [Enterococcus faecalis HH22]
gi|229305783|gb|EEN71779.1| S54 family peptidase [Enterococcus faecalis ATCC 29200]
gi|229310050|gb|EEN76037.1| S54 family peptidase [Enterococcus faecalis TX1322]
gi|256596238|gb|EEU15414.1| membrane-associated serine protease [Enterococcus faecalis ATCC
4200]
gi|256711026|gb|EEU26069.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256951462|gb|EEU68094.1| membrane-associated serine protease [Enterococcus faecalis Merz96]
gi|256989681|gb|EEU76983.1| membrane-associated serine protease [Enterococcus faecalis E1Sol]
gi|256992277|gb|EEU79579.1| membrane-associated serine protease [Enterococcus faecalis Fly1]
gi|256995783|gb|EEU83085.1| membrane-associated serine protease [Enterococcus faecalis D6]
gi|256999837|gb|EEU86357.1| membrane-associated serine protease [Enterococcus faecalis CH188]
gi|257162002|gb|EEU91962.1| membrane-associated serine protease [Enterococcus faecalis T11]
gi|257163425|gb|EEU93385.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|291080131|gb|EFE17495.1| rhomboid family protein [Enterococcus faecalis R712]
gi|291083440|gb|EFE20403.1| rhomboid family protein [Enterococcus faecalis S613]
gi|295113720|emb|CBL32357.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Enterococcus sp. 7L76]
gi|300849531|gb|EFK77281.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
TUSoD Ef11]
gi|306502083|gb|EFM71369.1| peptidase, S54 family protein [Enterococcus faecalis TX0109]
gi|306507138|gb|EFM76277.1| peptidase, S54 family protein [Enterococcus faecalis TX2134]
gi|310627445|gb|EFQ10728.1| peptidase, S54 family protein [Enterococcus faecalis DAPTO 512]
gi|310630874|gb|EFQ14157.1| peptidase, S54 family protein [Enterococcus faecalis TX0102]
gi|310631933|gb|EFQ15216.1| peptidase, S54 family protein [Enterococcus faecalis TX0635]
gi|311289218|gb|EFQ67774.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
DAPTO 516]
gi|311292401|gb|EFQ70957.1| peptidase, S54 family protein [Enterococcus faecalis TX0470]
gi|315026583|gb|EFT38515.1| peptidase, S54 family protein [Enterococcus faecalis TX2137]
gi|315030810|gb|EFT42742.1| peptidase, S54 family protein [Enterococcus faecalis TX4000]
gi|315033041|gb|EFT44973.1| peptidase, S54 family protein [Enterococcus faecalis TX0017]
gi|315036315|gb|EFT48247.1| peptidase, S54 family protein [Enterococcus faecalis TX0027]
gi|315145726|gb|EFT89742.1| peptidase, S54 family protein [Enterococcus faecalis TX2141]
gi|315148748|gb|EFT92764.1| peptidase, S54 family protein [Enterococcus faecalis TX4244]
gi|315154212|gb|EFT98228.1| peptidase, S54 family protein [Enterococcus faecalis TX0031]
gi|315156498|gb|EFU00515.1| peptidase, S54 family protein [Enterococcus faecalis TX0043]
gi|315158975|gb|EFU02992.1| peptidase, S54 family protein [Enterococcus faecalis TX0312]
gi|315162792|gb|EFU06809.1| peptidase, S54 family protein [Enterococcus faecalis TX0645]
gi|315166274|gb|EFU10291.1| peptidase, S54 family protein [Enterococcus faecalis TX1302]
gi|315169133|gb|EFU13150.1| peptidase, S54 family protein [Enterococcus faecalis TX1341]
gi|315171857|gb|EFU15874.1| peptidase, S54 family protein [Enterococcus faecalis TX1342]
gi|315173893|gb|EFU17910.1| peptidase, S54 family protein [Enterococcus faecalis TX1346]
gi|315575258|gb|EFU87449.1| peptidase, S54 family protein [Enterococcus faecalis TX0309B]
gi|315576837|gb|EFU89028.1| peptidase, S54 family protein [Enterococcus faecalis TX0630]
gi|315582383|gb|EFU94574.1| peptidase, S54 family protein [Enterococcus faecalis TX0309A]
gi|323481711|gb|ADX81150.1| rhomboid family protein [Enterococcus faecalis 62]
gi|327536002|gb|AEA94836.1| rhomboid family protein [Enterococcus faecalis OG1RF]
gi|401674182|gb|EJS80541.1| GlpG protein (membrane protein of glp regulon) [Enterococcus
faecalis ATCC 29212]
gi|402354963|gb|EJU89751.1| peptidase, S54 family [Enterococcus faecalis 599]
gi|402408930|gb|EJV41379.1| peptidase, S54 family [Enterococcus faecalis R508]
gi|427186107|emb|CCO73331.1| small hydrophobic molecule transporter protein, putative
[Enterococcus faecalis str. Symbioflor 1]
gi|429513460|gb|ELA03041.1| membrane-associated serine protease [Enterococcus faecalis OG1X]
gi|429515221|gb|ELA04739.1| membrane-associated serine protease [Enterococcus faecalis M7]
Length = 236
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+I L + G + R L+ + ++ +R ++ M+LH G +H+++NM +L + ++E +G R
Sbjct: 41 NILNLVNWGAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG G++ S G VS GAS ALFGL G +I N
Sbjct: 101 YLGIYLLSGIAGNIASFAF--GTPNSVSAGASTALFGLFGAF---VILGRHFRDNPAIMY 155
Query: 189 SV--LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
V I +NL F VD + H+GG G+L +A
Sbjct: 156 MVQRYSMFIVINLLFNLFS--SSVDMMGHVGGLIGGLL------------------VATA 195
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVL 273
+ +R+ + ++++ + I LV+
Sbjct: 196 FAVPNREEAFNKHERIMATLIFIFLVV 222
>gi|403411581|emb|CCL98281.1| predicted protein [Fibroporia radiculosa]
Length = 1317
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
NQ +R ++ ++LHAGIIH ++NM + VS ++E+E G LY+ SG G++L
Sbjct: 1103 NQWFRFITPIFLHAGIIHYLLNMLAQTTVSAQVEREMGSVFFLVLYIASGTFGNVLG--- 1159
Query: 148 HKGKKEIV---SVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
G +V SVGASGA+FG +L A+W T L+ + + + + GFI
Sbjct: 1160 --GNFALVGQPSVGASGAIFGTTAIAWIDLFAHWRYQYRPGTKLAWMVVELVIGVGLGFI 1217
Query: 205 PGVDGVDNLAH 215
P VDN AH
Sbjct: 1218 P---YVDNFAH 1225
>gi|227519427|ref|ZP_03949476.1| S54 family peptidase [Enterococcus faecalis TX0104]
gi|424678054|ref|ZP_18114899.1| peptidase, S54 family [Enterococcus faecalis ERV103]
gi|424679974|ref|ZP_18116787.1| peptidase, S54 family [Enterococcus faecalis ERV116]
gi|424684441|ref|ZP_18121157.1| peptidase, S54 family [Enterococcus faecalis ERV129]
gi|424687903|ref|ZP_18124525.1| peptidase, S54 family [Enterococcus faecalis ERV25]
gi|424689750|ref|ZP_18126306.1| peptidase, S54 family [Enterococcus faecalis ERV31]
gi|424694204|ref|ZP_18130609.1| peptidase, S54 family [Enterococcus faecalis ERV37]
gi|424696292|ref|ZP_18132647.1| peptidase, S54 family [Enterococcus faecalis ERV41]
gi|424700479|ref|ZP_18136665.1| peptidase, S54 family [Enterococcus faecalis ERV62]
gi|424704746|ref|ZP_18140840.1| peptidase, S54 family [Enterococcus faecalis ERV63]
gi|424706937|ref|ZP_18142930.1| peptidase, S54 family [Enterococcus faecalis ERV65]
gi|424718163|ref|ZP_18147420.1| peptidase, S54 family [Enterococcus faecalis ERV68]
gi|424720446|ref|ZP_18149548.1| peptidase, S54 family [Enterococcus faecalis ERV72]
gi|424726078|ref|ZP_18154762.1| peptidase, S54 family [Enterococcus faecalis ERV73]
gi|424734075|ref|ZP_18162625.1| peptidase, S54 family [Enterococcus faecalis ERV81]
gi|424746066|ref|ZP_18174317.1| peptidase, S54 family [Enterococcus faecalis ERV85]
gi|424753580|ref|ZP_18181522.1| peptidase, S54 family [Enterococcus faecalis ERV93]
gi|227073134|gb|EEI11097.1| S54 family peptidase [Enterococcus faecalis TX0104]
gi|402352548|gb|EJU87394.1| peptidase, S54 family [Enterococcus faecalis ERV103]
gi|402355193|gb|EJU89971.1| peptidase, S54 family [Enterococcus faecalis ERV116]
gi|402361515|gb|EJU96072.1| peptidase, S54 family [Enterococcus faecalis ERV129]
gi|402362568|gb|EJU97093.1| peptidase, S54 family [Enterococcus faecalis ERV25]
gi|402366516|gb|EJV00887.1| peptidase, S54 family [Enterococcus faecalis ERV31]
gi|402371419|gb|EJV05578.1| peptidase, S54 family [Enterococcus faecalis ERV37]
gi|402373701|gb|EJV07766.1| peptidase, S54 family [Enterococcus faecalis ERV62]
gi|402378181|gb|EJV12058.1| peptidase, S54 family [Enterococcus faecalis ERV41]
gi|402381183|gb|EJV14896.1| peptidase, S54 family [Enterococcus faecalis ERV63]
gi|402382489|gb|EJV16152.1| peptidase, S54 family [Enterococcus faecalis ERV68]
gi|402386145|gb|EJV19654.1| peptidase, S54 family [Enterococcus faecalis ERV65]
gi|402389794|gb|EJV23175.1| peptidase, S54 family [Enterococcus faecalis ERV73]
gi|402390594|gb|EJV23928.1| peptidase, S54 family [Enterococcus faecalis ERV81]
gi|402393308|gb|EJV26536.1| peptidase, S54 family [Enterococcus faecalis ERV72]
gi|402397911|gb|EJV30902.1| peptidase, S54 family [Enterococcus faecalis ERV85]
gi|402403870|gb|EJV36518.1| peptidase, S54 family [Enterococcus faecalis ERV93]
Length = 236
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+I L + G + R L+ + ++ +R ++ M+LH G +H+++NM +L + ++E +G R
Sbjct: 41 NILNLVNWGAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG G++ S G VS GAS ALFGL G +I N
Sbjct: 101 YLGIYLLSGIAGNIASFAF--GTPNSVSAGASTALFGLFGAF---VILGRHFRDNPAIMY 155
Query: 189 SV--LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
V I +NL F VD + H+GG G+L +A
Sbjct: 156 MVQRYSMFIVINLLFNLFS--SSVDMMGHVGGLIGGLL------------------VATA 195
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVL 273
+ +R+ + ++++ + I LV+
Sbjct: 196 FAVPNREKAFNKHERIMATLIFIFLVV 222
>gi|331682074|ref|ZP_08382698.1| outer membrane protein [Escherichia coli H299]
gi|450186095|ref|ZP_21889397.1| hypothetical protein A364_03753 [Escherichia coli SEPT362]
gi|331080753|gb|EGI51927.1| outer membrane protein [Escherichia coli H299]
gi|449324675|gb|EMD14600.1| hypothetical protein A364_03753 [Escherichia coli SEPT362]
Length = 625
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 82/131 (62%), Gaps = 7/131 (5%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH- 147
+ +RLLSS++LH+ + HL++NM +L++V +E+ G R+ ++L SG G L+S +
Sbjct: 60 ESWRLLSSVFLHSSVSHLLMNMFALLVVGGAVERILGKWRLLIIWLFSGIFGGLISACYA 119
Query: 148 -HKGKKEIVSVGASGALFGLLGTMLSELIAN--WTIYANKCTSLSVLGSVIALNLAFGFI 204
H+ ++ ++SVGASGA+ G+ G ++ +++ T + N+ S+LG ++AL L +G
Sbjct: 120 LHESEQIVISVGASGAIMGIAGAAIATQLSSGAGTHHKNQRRVFSLLG-MVALTLLYGAR 178
Query: 205 PGVDGVDNLAH 215
G+DN H
Sbjct: 179 QA--GIDNACH 187
>gi|293608902|ref|ZP_06691205.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829475|gb|EFF87837.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 269
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 108/250 (43%), Gaps = 49/250 (19%)
Query: 3 NKPYAPEQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKE 62
N+ + W WLT ++ ++ + +FV+ + A D V++D + W
Sbjct: 10 NRKLNVQTW--WLTALLILINVSLFVWQI------ATGVDISDPVMKDAIH------W-- 53
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
G D + Q RL +SM+ H G++HL++NM +L + E
Sbjct: 54 ---------------GADFTPLTFTGQPERLFTSMFFHFGLVHLMLNMWALYIFGNVAES 98
Query: 123 EFGFARIAPLYLLSGFGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTM 170
FG +YLL+G GSLLS L H + + VS GASGA+ GL +
Sbjct: 99 LFGRFYFIGMYLLAGLFGSLLSSYMTIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAAL 158
Query: 171 LSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILF 230
+ + L V+A+NL FGF+ G++N AHIGG G L + +
Sbjct: 159 TVLSLFPPLPHQAYILDKKALLMVMAINLIFGFV--ATGINNAAHIGGMIIGAFLALMWY 216
Query: 231 LRPQYGYVSE 240
L YVS+
Sbjct: 217 LS----YVSK 222
>gi|347755936|ref|YP_004863500.1| hypothetical protein [Candidatus Chloracidobacterium thermophilum
B]
gi|347588454|gb|AEP12984.1| putative membrane protein [Candidatus Chloracidobacterium
thermophilum B]
Length = 424
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 71 STLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIA 130
L G +R LI + + +RL+ M+LH G+IHL+ NM +L ++ +LE +G AR
Sbjct: 85 DVLTAFGACNRKLI-DQGEVWRLVVPMFLHIGMIHLLANMYALWVLGPQLESLYGSARFT 143
Query: 131 PLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS---ELIANWTIYANKCTS 187
LYLLSG GG + S + E + GASGALFG+ G +L + A
Sbjct: 144 ILYLLSGIGGFVAS--YFFAHPESIGAGASGALFGMFGALLVFVYKYRAEIPPMVRATMQ 201
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFL 231
V ++I +NL F + + H+GG +G+ G LF+
Sbjct: 202 RGVWLTLI-INLVITF--SIPFISRSGHVGGLLTGI--GLALFI 240
>gi|255971815|ref|ZP_05422401.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255962833|gb|EET95309.1| conserved hypothetical protein [Enterococcus faecalis T1]
Length = 230
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+I L + G + R L+ + ++ +R ++ M+LH G +H+++NM +L + ++E +G R
Sbjct: 35 NILNLVNWGAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWR 94
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG G++ S G VS GAS ALFGL G +I N
Sbjct: 95 YLGIYLLSGIAGNIASFAF--GTPNSVSAGASTALFGLFGAF---VILGRHFRDNPAIMY 149
Query: 189 SV--LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
V I +NL F VD + H+GG G+L +A
Sbjct: 150 MVQRYSMFIVINLLFNLFS--SSVDMMGHVGGLIGGLL------------------VATA 189
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVL 273
+ +R+ + ++++ + I LV+
Sbjct: 190 FAVPNREEAFNKHERIMATLIFIFLVV 216
>gi|160874070|ref|YP_001553386.1| rhomboid family protein [Shewanella baltica OS195]
gi|378707313|ref|YP_005272207.1| rhomboid family protein [Shewanella baltica OS678]
gi|418024298|ref|ZP_12663281.1| Peptidase S54, rhomboid domain protein [Shewanella baltica OS625]
gi|160859592|gb|ABX48126.1| Rhomboid family protein [Shewanella baltica OS195]
gi|315266302|gb|ADT93155.1| Rhomboid family protein [Shewanella baltica OS678]
gi|353536258|gb|EHC05817.1| Peptidase S54, rhomboid domain protein [Shewanella baltica OS625]
Length = 360
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
L + ++ + + L S M+LH ++HL NM L +V LE G AR LYL+ G
Sbjct: 183 ALRADDVMHGSHVWTLFSHMFLHGDLMHLAGNMYFLYVVGDNLEDALGRARFFVLYLVCG 242
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTML-----SELIANWTIYANKCTSLSVLG 192
F + G I VGASGA+ GL G L + L + IY K + ++
Sbjct: 243 FAAAATQIAADPGSN-IYMVGASGAIAGLFGMYLMWFRHASLTFMFIIYQKKLSPMAFFS 301
Query: 193 SVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFIL 229
+ N+ G I +GV AHIGGF +G+L+G L
Sbjct: 302 IWLVFNI-IGLIMAGEGVAYWAHIGGFVAGLLMGIFL 337
>gi|50841776|ref|YP_055003.1| membrane spanning protein [Propionibacterium acnes KPA171202]
gi|289424590|ref|ZP_06426373.1| peptidase, S54 family [Propionibacterium acnes SK187]
gi|289428896|ref|ZP_06430576.1| peptidase, S54 family [Propionibacterium acnes J165]
gi|335050432|ref|ZP_08543398.1| peptidase, S54 family [Propionibacterium sp. 409-HC1]
gi|335054191|ref|ZP_08547011.1| peptidase, S54 family [Propionibacterium sp. 434-HC2]
gi|342212068|ref|ZP_08704793.1| peptidase, S54 family [Propionibacterium sp. CC003-HC2]
gi|354606260|ref|ZP_09024231.1| hypothetical protein HMPREF1003_00798 [Propionibacterium sp.
5_U_42AFAA]
gi|386023238|ref|YP_005941541.1| membrane spanning protein [Propionibacterium acnes 266]
gi|407934668|ref|YP_006850310.1| membrane spanning protein [Propionibacterium acnes C1]
gi|50839378|gb|AAT82045.1| membrane spanning protein [Propionibacterium acnes KPA171202]
gi|289155287|gb|EFD03969.1| peptidase, S54 family [Propionibacterium acnes SK187]
gi|289157897|gb|EFD06120.1| peptidase, S54 family [Propionibacterium acnes J165]
gi|332674694|gb|AEE71510.1| membrane spanning protein [Propionibacterium acnes 266]
gi|333765307|gb|EGL42661.1| peptidase, S54 family [Propionibacterium sp. 434-HC2]
gi|333769705|gb|EGL46802.1| peptidase, S54 family [Propionibacterium sp. 409-HC1]
gi|340767612|gb|EGR90137.1| peptidase, S54 family [Propionibacterium sp. CC003-HC2]
gi|353557667|gb|EHC27035.1| hypothetical protein HMPREF1003_00798 [Propionibacterium sp.
5_U_42AFAA]
gi|407903249|gb|AFU40079.1| membrane spanning protein [Propionibacterium acnes C1]
Length = 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 88 NQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R ++SM+ HA I H+ NM +L + LE G AR YL+SG GG L CL
Sbjct: 124 TEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCL 183
Query: 147 --HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
G + I+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 184 MATADGGRAILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGASTRELWVVLAIN 236
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
A + G+ AH+GGF G++ G I F P K I AG A+
Sbjct: 237 AALLLF--ISGIAWQAHLGGFLVGMMCGVIFFEDP-------KRIQAGKSAR 279
>gi|170290174|ref|YP_001736990.1| rhomboid family protein [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174254|gb|ACB07307.1| Rhomboid family protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 452
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 13/174 (7%)
Query: 76 LGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLL 135
+GG +L+ +Q YR L+SM+LHA I H+ NM L +E G R LYL+
Sbjct: 49 VGGFSPSLLTHTDQWYRFLTSMFLHADIFHIFFNMYFLFFAGRAVEDALGSTRFIFLYLI 108
Query: 136 SGFGGSLL----SCLHHKGKKEIVSVGASGALFGLLGTML------SELIANWTIYANKC 185
SG S+ S + I ++GASGA+ G+LG L S ++ + C
Sbjct: 109 SGLAASIFHSAYSFIGGLTSYAIPAIGASGAISGVLGAYLLFYPGTSLVVCIPVFFFPLC 168
Query: 186 TSLSVLGSVI---ALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYG 236
+ ++ A+ + +GF GV AH GGF +G+ L IL R + G
Sbjct: 169 FPMRASLYILFWFAMQVIYGFARIAGGVAVFAHAGGFLAGIALLPILANRRRIG 222
>gi|441521785|ref|ZP_21003443.1| rhomboid family protein [Gordonia sihwensis NBRC 108236]
gi|441458723|dbj|GAC61404.1| rhomboid family protein [Gordonia sihwensis NBRC 108236]
Length = 248
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 11/136 (8%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+N+ +RLL+S +LH I+H+ +NM SL L+ LE+ G AR +YL+ FGGS + +
Sbjct: 72 ENEYWRLLTSGFLHWSILHVAMNMISLYLIGADLERVLGPARYLAVYLIGLFGGS--AAV 129
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPG 206
G + + GASGA++GLLG +L +I + A ++ VL V++L+
Sbjct: 130 VALGPELAATAGASGAIYGLLGALLIVVI-RLKLPATTLITVIVLNVVLSLS-------- 180
Query: 207 VDGVDNLAHIGGFASG 222
+ G+ AH GGF G
Sbjct: 181 IPGISIWAHFGGFVFG 196
>gi|159040476|ref|YP_001539729.1| rhomboid family protein [Salinispora arenicola CNS-205]
gi|157919311|gb|ABW00739.1| Rhomboid family protein [Salinispora arenicola CNS-205]
Length = 303
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
+ + + YRL+++M+LH G+IHL++NM +L ++ LE G AR LYL+SG GG++ +
Sbjct: 134 IAEGEWYRLITAMFLHYGVIHLLLNMYALWILGRNLEASLGPARFLALYLISGLGGNVAA 193
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L + GAS A+FGL + + + +S + ++ +NL F
Sbjct: 194 YLIS--APNAATAGASTAIFGLFAAL-------FVVGRRLGRDVSQVLPILVINLVFTLT 244
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
V G+ H+GG G L+ IL P+
Sbjct: 245 --VPGISIPGHLGGLVLGALMAVILAYAPR 272
>gi|255586757|ref|XP_002533998.1| conserved hypothetical protein [Ricinus communis]
gi|223526009|gb|EEF28387.1| conserved hypothetical protein [Ricinus communis]
Length = 114
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
Query: 9 EQWRAWLTPVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGP 68
++W+ W+ P + I+MFV TM+VNNCP +S CV LGR+SFQP+KEN LLGP
Sbjct: 55 KKWKPWIIPSFVIANIVMFVITMYVNNCP---KNSVSCVA-SFLGRFSFQPFKENPLLGP 110
Query: 69 SIST 72
S +T
Sbjct: 111 SSNT 114
>gi|15839491|ref|NP_334528.1| rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|148821302|ref|YP_001286056.1| integral membrane protein [Mycobacterium tuberculosis F11]
gi|253797028|ref|YP_003030029.1| hypothetical protein TBMG_00111 [Mycobacterium tuberculosis KZN
1435]
gi|254233504|ref|ZP_04926830.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|289445640|ref|ZP_06435384.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289747877|ref|ZP_06507255.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308378549|ref|ZP_07482957.2| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308394636|ref|ZP_07491694.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|375294312|ref|YP_005098579.1| hypothetical protein TBSG_00111 [Mycobacterium tuberculosis KZN
4207]
gi|392430521|ref|YP_006471565.1| hypothetical protein TBXG_000111 [Mycobacterium tuberculosis KZN
605]
gi|422815296|ref|ZP_16863514.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|13879598|gb|AAK44342.1| Rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|124603297|gb|EAY61572.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|148719829|gb|ABR04454.1| conserved integral membrane protein [Mycobacterium tuberculosis
F11]
gi|253318531|gb|ACT23134.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289418598|gb|EFD15799.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289688405|gb|EFD55893.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308197784|gb|ADO17908.1| rhomboid protease 1 [Mycobacterium tuberculosis H37Rv]
gi|308197788|gb|ADO17910.1| rhomboid protease 1 [Mycobacterium tuberculosis]
gi|308197792|gb|ADO17912.1| rhomboid protease 1 [Mycobacterium bovis BCG]
gi|308197796|gb|ADO17914.1| rhomboid protease 1 [Mycobacterium bovis]
gi|308352202|gb|EFP41053.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308367674|gb|EFP56525.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|323717250|gb|EGB26458.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|328456817|gb|AEB02240.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
gi|392051930|gb|AFM47488.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
Length = 284
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 78 GLDRNLI-----VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPL 132
GL+R L V Q YRL++S +LH G +HL++NM +L +V LE G R L
Sbjct: 94 GLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGAL 153
Query: 133 YLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS-----ELIANWTIYANKCTS 187
Y +S GGS+L ++ + GASGA+FGL G L W +
Sbjct: 154 YAVSALGGSVL--VYLIAPLNTATAGASGAVFGLFGATFMVARRLHLDVRWVV------- 204
Query: 188 LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
++I +NLAF F+ + H+GG +G L+ P+
Sbjct: 205 -----ALIVINLAFTFL--APAISWQGHVGGLVTGALVAATYVYAPR 244
>gi|414156375|ref|ZP_11412677.1| hypothetical protein HMPREF9186_01097 [Streptococcus sp. F0442]
gi|410870022|gb|EKS17981.1| hypothetical protein HMPREF9186_01097 [Streptococcus sp. F0442]
Length = 225
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V +Q +R++++ ++H G+ H V+NM +L + E FG LYLLSG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
+ ++++ GAS ALFGL GT+ + + Y + S+I +NL F F+
Sbjct: 113 AIF---TPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYT--SLIVVNLIFSFM 167
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
P + HIGG +GV+L ++ +R + ++ Y
Sbjct: 168 PDISMA---GHIGGLVAGVMLAYVFPVRGEALFMKRSY 202
>gi|381399873|ref|ZP_09924890.1| Rhomboid family protein [Microbacterium laevaniformans OR221]
gi|380772836|gb|EIC06523.1| Rhomboid family protein [Microbacterium laevaniformans OR221]
Length = 281
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHH 148
Q +RLL+ +HA I H+ NM +L + LE G R LYLLS GGS+L+ L
Sbjct: 117 QPWRLLTVTLVHASIFHIAFNMLALWALGRSLEPLLGRWRFLALYLLSALGGSVLTALL- 175
Query: 149 KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVD 208
VGASGA++GLLG M + I + +++ + ++ +NL F+PG +
Sbjct: 176 --APNTWVVGASGAVWGLLGAM-------FVIGRHLGANVTAIAVLLGINLVITFLPGSN 226
Query: 209 GVDNLAHIGGFASGVLLGFI 228
+ AHIGG G L+G I
Sbjct: 227 -IAWQAHIGGGLVGALIGVI 245
>gi|158311990|ref|YP_001504498.1| rhomboid family protein [Frankia sp. EAN1pec]
gi|158107395|gb|ABW09592.1| Rhomboid family protein [Frankia sp. EAN1pec]
Length = 381
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+Q YRLL++ +LH +H++VN+ +L ++ Y+LE G R+ L++ GG+ LS L
Sbjct: 212 DDQYYRLLTAAFLHVNYLHVLVNLYALFVLGYQLEAILGRLRLVALFVACAVGGNTLSYL 271
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPG 206
+ + SVGAS A+FG G + + + A+ L ++G AL FI
Sbjct: 272 VN--GVSVNSVGASTAIFGFFG---AYYVIARRLRADTTQILILIGINFALTFTLSFI-- 324
Query: 207 VDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
D H+GG +GVL+G + Y YV +
Sbjct: 325 ----DRWGHVGGLVAGVLVGLL------YAYVPPR 349
>gi|312193973|ref|YP_004014034.1| rhomboid family protein [Frankia sp. EuI1c]
gi|311225309|gb|ADP78164.1| Rhomboid family protein [Frankia sp. EuI1c]
Length = 390
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 17/161 (10%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I +K++ +RL+++ +LH ++H+ NM +L L+ +LE G R L+ GG+ L
Sbjct: 217 IAQKHEYWRLVTAAFLHGSVLHIAFNMYALFLLGTQLEAILGRVRYLALFFACAIGGNTL 276
Query: 144 SCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGF 203
S + H K S GAS A+FG LIA + N L V+G +NL F
Sbjct: 277 SYVIHDEKA--FSYGASTAIFGFFAAYY--LIAR-RLRVNTNQILIVVG----INLLITF 327
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
+ G+D HIGG A+GV+LG + Y YV + +A
Sbjct: 328 --SISGIDKWGHIGGLATGVVLGLL------YAYVPARRVA 360
>gi|170780474|ref|YP_001708806.1| rhomboid family membrane protein [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155042|emb|CAQ00138.1| putative rhomboid family membrane protein [Clavibacter
michiganensis subsp. sepedonicus]
Length = 287
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 15/147 (10%)
Query: 89 QKYRLLSSMWLHA--GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R+L+S + H+ I+H+V NM S+ + LE G AR L+L+S GGSL +
Sbjct: 118 EPWRMLTSAFTHSPSSILHIVFNMLSVFVFGRVLEPMLGRARFLALFLISALGGSLAVEV 177
Query: 147 HHKGKKEIVS--VGASGALFGLLGTMLSELIANWTIYANKC-TSLSVLGSVIALNLAFGF 203
E + VGASGA+FGL+G + + A K ++ L +IA+NL GF
Sbjct: 178 IGSAMGEPLQAVVGASGAIFGLMG--------GYFVLARKLGGNVGPLLGIIAINLLLGF 229
Query: 204 IPGVDGVDNLAHIGGFASGVLLGFILF 230
+ V GV AH+GG +G L+ +L
Sbjct: 230 V--VQGVSWQAHVGGLVTGALVAIVLL 254
>gi|283797031|ref|ZP_06346184.1| rhomboid protease GluP [Clostridium sp. M62/1]
gi|291075447|gb|EFE12811.1| peptidase, S54 family [Clostridium sp. M62/1]
Length = 205
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 83 LIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSL 142
L+V + YRL++S++LH I HL+ NM L ++ RLEQ G R YLL G G ++
Sbjct: 47 LVVENGEYYRLITSVFLHFSIRHLLNNMLVLFILGDRLEQILGGVRYLLFYLLCGLGANI 106
Query: 143 LSCLHH--KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT----SLSVLGSVIA 196
+S + G +S GASGA+FG++G ++ W ++ N+ S L +
Sbjct: 107 VSLIFDLKMGDWYTMSAGASGAIFGVVGGLM------WIVFMNRGRLGDLSSGQLAVMAF 160
Query: 197 LNLAFGFIPGVDGVDNLAH 215
L GF GVDN AH
Sbjct: 161 FTLYLGFTS--SGVDNAAH 177
>gi|282853343|ref|ZP_06262680.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
J139]
gi|282582796|gb|EFB88176.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
J139]
Length = 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 88 NQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R ++SM+ HA I H+ NM +L + LE G AR YL+SG GG L CL
Sbjct: 124 TEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCL 183
Query: 147 --HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
G + I+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 184 MATADGGRTILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGVSTRELWVVLAIN 236
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
A + G+ AH+GGF G++ G I F P K I AG A+
Sbjct: 237 AALLLF--ISGIAWQAHLGGFLVGMMCGVIFFEDP-------KRIQAGKSAQ 279
>gi|315605422|ref|ZP_07880463.1| rhomboid family protein [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312877|gb|EFU60953.1| rhomboid family protein [Actinomyces sp. oral taxon 180 str. F0310]
Length = 256
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS--- 144
+Q + +L+ +LH GI+H+ NM +L V +E G R +YL+S GGS
Sbjct: 74 SQPWTILTGAFLHGGIMHIGFNMLTLYWVGRAIEPALGRWRYLTIYLVSALGGSAFVIAW 133
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
CL + + +VGASGA+FGL G + ++ + TS+ L + NLA+GFI
Sbjct: 134 CLIQPAQIYVGTVGASGAVFGLFGAVFVLQ----RLHGSDTTSIVAL---LVANLAYGFI 186
Query: 205 PGVDGVDNLAHIGGFASG--VLLGFILFLRPQYG 236
G+ AHIGG G V F RP+ G
Sbjct: 187 --ASGISWQAHIGGLVVGAAVTWAFARLSRPRPG 218
>gi|429205379|ref|ZP_19196656.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
gi|428146451|gb|EKW98690.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
Length = 224
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 10/140 (7%)
Query: 87 KNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ + +RL+++M+LH GI HL +NM +L + +E +G AR+ +YLLSG G+LLS
Sbjct: 63 QGEWWRLIAAMFLHDGIGHLFINMITLYFIGPEIEDHYGHARMLVIYLLSGLYGNLLSAF 122
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPG 206
++VGASGALFGL G L ++ + + A + LN+ GF
Sbjct: 123 W---APTTLAVGASGALFGLFGAYL--ILGHQSTDAQIQAQARQFLLFVILNVVLGF--- 174
Query: 207 VDGVDNLA-HIGGFASGVLL 225
G +LA H+GG +G L+
Sbjct: 175 -SGNTDLAGHVGGLIAGCLV 193
>gi|291520209|emb|CBK75430.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Butyrivibrio fibrisolvens 16/4]
Length = 191
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 7/160 (4%)
Query: 77 GGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLS 136
G ++ L++ ++ YRL ++ ++H GI HL NM L L+ E+ G R +YL S
Sbjct: 14 GAMNPYLVLYGHEWYRLFTATFMHFGINHLANNMLLLFLLGQMFERAVGPTRYLGIYLGS 73
Query: 137 GFGGSLLSCLHH--KGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSV 194
G GS LS + GK +IV+ GASGA+FG++G M+ +I N Y K S+ + +
Sbjct: 74 GLAGSFLSFFYMCLVGKNDIVA-GASGAIFGIVGGMVVVVIVNKGRY--KGISVRRMVFM 130
Query: 195 IALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
L L FGF G DN+ H+GG +G++L F + P
Sbjct: 131 ALLTLYFGFATA--GTDNVGHLGGLMAGIILTFFSYGIPT 168
>gi|66350796|emb|CAI95607.1| rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
Length = 231
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
+++ L S + + L+ + M V LE+ G+ RIA +YLLSG G+L S +
Sbjct: 27 HEEATLCSQVHCMDDVCGLLPFLNPEMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIF 86
Query: 148 HKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGV 207
+ E VG +G+ FG+L + EL +W I A + L +V+ FG +P
Sbjct: 87 LPYRAE---VGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLP-- 141
Query: 208 DGVDNLAHIGGFASGVLLGF 227
+DN AHI GF SG+ L F
Sbjct: 142 -WIDNFAHISGFISGLFLSF 160
>gi|262279911|ref|ZP_06057696.1| rhomboid family protein [Acinetobacter calcoaceticus RUH2202]
gi|262260262|gb|EEY78995.1| rhomboid family protein [Acinetobacter calcoaceticus RUH2202]
Length = 269
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL +SM+ H G++HL++NM +L + E FG +YLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTSMFFHFGLVHLMLNMWALYIFGNVAESLFGRFYFIGMYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ GL + + +
Sbjct: 114 LFGSLLSSYMTIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFPPLPHQAYI 173
Query: 186 TSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSE 240
L ++A+NL FGF+ G++N AHIGG G L + +L YVS+
Sbjct: 174 LDKKALLMIMAINLIFGFV--ATGINNAAHIGGMVIGAFLALMWYLS----YVSK 222
>gi|338731999|ref|YP_004670472.1| hypothetical protein SNE_A01030 [Simkania negevensis Z]
gi|336481382|emb|CCB87981.1| hypothetical protein SNE_A01030 [Simkania negevensis Z]
Length = 336
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 4/177 (2%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
L+ P + + GG + + V + +RLL+S+++H G+IHL+VNM +L + LE
Sbjct: 24 LIHPEVKDILHWGG-NSSYEVLSGEWWRLLTSLFIHIGLIHLLVNMYALFSMGRFLESVI 82
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G YL+SG + S L H+ + IVS GASGA+ G+ G L +
Sbjct: 83 GSYLFFVSYLVSGLISGIASFLFHQ-ETMIVSAGASGAIAGIFGMGCVILFTIPMSIEER 141
Query: 185 CTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEK 241
+L V+ N+ + F +D+ AH+GGFA G+LLG + + + G+ K
Sbjct: 142 KKALLNCMYVLFANVMYAF--KSHDLDHSAHLGGFACGILLGLVYYWIDRSGFALRK 196
>gi|361127409|gb|EHK99378.1| putative Inactive rhomboid protein 1 [Glarea lozoyensis 74030]
Length = 302
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
Query: 86 RKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC 145
+ +Q +R + ++LHAGIIH+ NM M + +E G R +Y+ SG G +L
Sbjct: 100 QPDQWFRFIVPIFLHAGIIHIGFNMLLQMTLGREMEMIIGSIRYFLVYIASGIFGFVLGG 159
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
+ + I S GASG+LFG+L L +L+ +W + + + IA++ G +P
Sbjct: 160 --NFAAEGIASTGASGSLFGILALTLLDLLYHWAERISPWKDFAFIMLDIAISFVLGLLP 217
Query: 206 GVDGVDNLAHIGGFASGVLLGFILFLRP 233
G+DN +HIGGF G+ LG + P
Sbjct: 218 ---GLDNFSHIGGFIMGIALGICILHSP 242
>gi|333992831|ref|YP_004525445.1| serine protease [Mycobacterium sp. JDM601]
gi|333488799|gb|AEF38191.1| serine protease [Mycobacterium sp. JDM601]
Length = 264
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 79 LDRNLI-----VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLY 133
LD L+ V Q YRLL+S +LH G +HL++NM +L +V LE G +R + LY
Sbjct: 84 LDSELVLWSPAVADGQLYRLLTSAFLHYGAMHLLLNMWALYVVGPPLEGLLGRSRFSALY 143
Query: 134 LLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGS 193
LLS GGS+ ++ + GASGA+FGL G + LI + + + + +
Sbjct: 144 LLSALGGSV--TVYLLAPLNTATAGASGAIFGLFG---ATLIVGRRLQMD----IGWVAA 194
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
+I +NL F F + + H+GG +G+L
Sbjct: 195 IIVINLVFTFT--IPQISWQGHVGGLVTGLL 223
>gi|445439255|ref|ZP_21441592.1| peptidase, S54 family [Acinetobacter baumannii OIFC021]
gi|444752209|gb|ELW76898.1| peptidase, S54 family [Acinetobacter baumannii OIFC021]
Length = 269
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 85/172 (49%), Gaps = 24/172 (13%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G D + Q RL ++M+ H GIIHL++NM +L + E FG LYLL+G
Sbjct: 54 GADFTPLTFSGQPERLFTNMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAG 113
Query: 138 FGGSLLSC----------LHHKGKKEI--VSVGASGALFGLLGTMLSELIANWTIYANKC 185
GSLLS L H + + VS GASGA+ G LG L+ L +++
Sbjct: 114 LFGSLLSSYINIQNGHELLQHFDQSLLPHVSAGASGAVMG-LGAALTVL----SLFPPLP 168
Query: 186 TSLSVLGS-----VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ +L ++A+NL FG + G++N AH+GG G LL I +L
Sbjct: 169 HQVYILDKKALLMIMAINLIFGLV--ATGINNAAHVGGMIMGALLALIWYLS 218
>gi|387502659|ref|YP_005943888.1| membrane spanning protein [Propionibacterium acnes 6609]
gi|335276704|gb|AEH28609.1| membrane spanning protein [Propionibacterium acnes 6609]
Length = 302
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 88 NQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R ++SM+ HA I H+ NM +L + LE G AR YL+SG GG L CL
Sbjct: 124 TEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCL 183
Query: 147 --HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
G + I+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 184 MATADGGRAILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGASTRELWVVLAIN 236
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
A + G+ AH+GGF G++ G I F P K I AG A+
Sbjct: 237 AALLLF--ISGIAWQAHLGGFLVGMMCGVIFFEDP-------KRIQAGKSAQ 279
>gi|400286679|ref|ZP_10788711.1| rhomboid-like protein [Psychrobacter sp. PAMC 21119]
Length = 326
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 29/191 (15%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSC-- 145
+ +RL+SS +LH G++HL+ N ++ E FG A+ L+LL+ GG+LL+
Sbjct: 56 DDPWRLVSSAFLHIGLMHLLFNGFAMYFFGQVAEPMFGSAKFLALFLLAAIGGNLLNSYV 115
Query: 146 -----LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCT-SLSVLGSVIALNL 199
L G+ I S GASG + G+ +L + A + I N +L L ++ +NL
Sbjct: 116 TWQGILEGTGQPGI-SAGASGGIMGIGAALL--IAAVFKISVNGLVLNLKSLILIMGINL 172
Query: 200 AFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA----------GYDA 249
+GF V G+DN HIGG +G+++ + G V + +AA Y A
Sbjct: 173 VYGF--AVPGIDNAGHIGGAVTGLIIALAI------GIVHRQRMAAIMQTVAINQNPYQA 224
Query: 250 KHRQPKYMHYQ 260
+ P +YQ
Sbjct: 225 NTQTPTQNNYQ 235
>gi|156041048|ref|XP_001587510.1| hypothetical protein SS1G_11502 [Sclerotinia sclerotiorum 1980]
gi|154695886|gb|EDN95624.1| hypothetical protein SS1G_11502 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 469
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
SIS L GG+ +Q YR + M+LHAGIIH+ NM M + +E G R
Sbjct: 269 SISDLCGFGGVG----ATPDQWYRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIR 324
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+Y+ SG G +L + I S GASGALFGL+ L +L+ W + L
Sbjct: 325 YFLVYISSGIFGFILGG--NFAATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKEL 382
Query: 189 SVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ + + ++ G +P G+DN +HIGGF G +LG + P
Sbjct: 383 AFILLDVIISFVLGLLP---GLDNFSHIGGFLMGFVLGLSILRSPN 425
>gi|373108079|ref|ZP_09522370.1| hypothetical protein HMPREF9623_02034 [Stomatobaculum longum]
gi|371650245|gb|EHO15713.1| hypothetical protein HMPREF9623_02034 [Stomatobaculum longum]
Length = 206
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 IVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLL 143
I ++ +RLL++ +LH GI HL NM L + LE G + YL S G S
Sbjct: 50 IFENHEYWRLLTAAFLHFGIRHLGNNMLVLFVTGDSLEHALGHVKYLIFYLFSAVGASAA 109
Query: 144 S-CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN-KCTSLSVLGSVIALNLAF 201
S + ++++S GASGA+F +LG ++ LI N + + +L ++ L+
Sbjct: 110 SLAVEVAMGQKVLSAGASGAVFAVLGGLIWVLIRNSGRFEEFRIRNLLFFSGMMLLS--- 166
Query: 202 GFIPGVDGVDNLAHIGGFASGVLLGFILFLRP 233
GF +GVDN AH GG G LL +L+ RP
Sbjct: 167 GFFT--EGVDNAAHAGGLLVGFLLAVVLYRRP 196
>gi|419420506|ref|ZP_13960735.1| membrane spanning protein [Propionibacterium acnes PRP-38]
gi|379978880|gb|EIA12204.1| membrane spanning protein [Propionibacterium acnes PRP-38]
Length = 302
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 88 NQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R ++SM+ HA I H+ NM +L + LE G AR YL+SG GG L CL
Sbjct: 124 TEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCL 183
Query: 147 --HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
G + I+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 184 MATADGGRAILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGASTRELWVVLAIN 236
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
A + G+ AH+GGF G++ G I F P K I AG A+
Sbjct: 237 AALLLF--ISGIAWQAHLGGFLVGMMCGVIFFEDP-------KRIQAGKSAQ 279
>gi|365964250|ref|YP_004945815.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn17]
gi|365740931|gb|AEW80625.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn17]
Length = 302
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 88 NQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R ++SM+ HA I H+ NM +L + LE G AR YL+SG GG L CL
Sbjct: 124 TEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCL 183
Query: 147 --HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
G + I+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 184 MATADGGRAILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGASTRELWVVLAIN 236
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
A + G+ AH+GGF G++ G I F P K I AG A+
Sbjct: 237 AALLLF--ISGIAWQAHLGGFLVGMMCGVIFFEDP-------KRIQAGKSAQ 279
>gi|398784354|ref|ZP_10547618.1| hypothetical protein SU9_14461 [Streptomyces auratus AGR0001]
gi|396995277|gb|EJJ06295.1| hypothetical protein SU9_14461 [Streptomyces auratus AGR0001]
Length = 303
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 85 VRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
V + + YRLL++M+LH + H+ NM SL + LE G AR LYLL+G GGS LS
Sbjct: 134 VAEGEWYRLLTAMFLHQQVAHIAFNMLSLWWLGPPLEAALGRARFIALYLLAGLGGSALS 193
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
+ + S+GASGA+FGLLG + ++ Y K + ++ LNL F F+
Sbjct: 194 --YFLAAQNQPSLGASGAIFGLLGA--TAVLLRRLRYDMKPVLI-----LLGLNLVFTFL 244
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQ 234
+ AH+GG G + F + P+
Sbjct: 245 --WPNIAWQAHVGGLVVGAAVAFGMVHAPR 272
>gi|365962008|ref|YP_004943574.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn31]
gi|365973189|ref|YP_004954748.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn33]
gi|365738689|gb|AEW82891.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn31]
gi|365743188|gb|AEW78385.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn33]
gi|456740418|gb|EMF64939.1| membrane spanning protein [Propionibacterium acnes FZ1/2/0]
Length = 302
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 88 NQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R ++SM+ HA I H+ NM +L + LE G AR YL+SG GG L CL
Sbjct: 124 TEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCL 183
Query: 147 --HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
G + I+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 184 MATADGGRAILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGASTRELWVVLAIN 236
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
A + G+ AH+GGF G++ G I F P K I AG A+
Sbjct: 237 AALLLF--ISGIAWQAHLGGFLVGMMCGVIFFEDP-------KRIQAGKSAQ 279
>gi|295693318|ref|YP_003601928.1| hypothetical protein LCRIS_01456 [Lactobacillus crispatus ST1]
gi|295031424|emb|CBL50903.1| Membrane protein [Lactobacillus crispatus ST1]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 65 LLGPSIST--LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
LG S +T L +G ++ +V +Q +RL + +LH GI+HLV N + + +E
Sbjct: 31 FLGGSENTNVLMKMGAMNNFAVVAGHQWWRLFMAQFLHIGIMHLVSNAIIIYYMGQYMEP 90
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
G R YLL+G GG+L+S + +S GAS ALFGL G M + + N ++
Sbjct: 91 LMGHVRFLVTYLLAGVGGNLMSLAFSADRG--LSAGASTALFGLFGAMTAIGLRN--LHN 146
Query: 183 NKCTSLSVLGSVIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
L V+AL NLA F+P G+D HIGG +G LL IL R Y
Sbjct: 147 PMIAFLGRQAFVLALINLALDIFVP---GIDIWGHIGGLIAGFLLAIILGDRVMKTY 200
>gi|300694566|ref|YP_003750539.1| rhomboid protease [Ralstonia solanacearum PSI07]
gi|299076603|emb|CBJ35939.1| putative rhomboid protease [Ralstonia solanacearum PSI07]
Length = 543
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 65 LLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEF 124
LL I L LGG + V+ + +RLLS+ +LHAG++HL +N+ L +E+ +
Sbjct: 203 LLQTPIDVLFKLGG-NAAFEVQHGEWWRLLSATFLHAGVLHLAINVIGLYATGIAVERIY 261
Query: 125 GFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANK 184
G A +YL +G GS LS + + VGASGA+FG+ G L +
Sbjct: 262 GPAAYLLIYLGAGLLGSALSLSF--AAQHAIGVGASGAVFGVAGAWLMAICRYRGQMPET 319
Query: 185 CTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ L+ LG + +L G GVDN AHIGG G +L IL R
Sbjct: 320 LSKRLLTQLGVFVLYSLVQGLTK--PGVDNAAHIGGLVGGCMLALILPAR 367
>gi|386335464|ref|YP_006031634.1| transmembrane hypothetical [Ralstonia solanacearum Po82]
gi|334197914|gb|AEG71098.1| transmembrane hypothetical [Ralstonia solanacearum Po82]
Length = 569
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 63 NYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
N L P IS L +LGG + V+ + +RLLS+ +LHAG++HL +NM L +E+
Sbjct: 228 NPLQTP-ISVLFNLGG-NAAFEVQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVER 285
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
+G A YL +G GS LS + + VGASGA+FG+ G L + +
Sbjct: 286 IYGPAAYLLTYLGAGLLGSALSLSF--AAQHAIGVGASGAVFGVAGAWLVAIGRYRGLMP 343
Query: 183 NKCTS--LSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLR 232
+ L+ LG + +L G GVDN AHIGG +L IL R
Sbjct: 344 QTLSKRLLTQLGLFVLYSLVQGLTK--PGVDNAAHIGGLVGSCVLAMILPAR 393
>gi|227877719|ref|ZP_03995755.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|312984383|ref|ZP_07791722.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
gi|227862707|gb|EEJ70190.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|310894227|gb|EFQ43310.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 65 LLGPSIST--LRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQ 122
LG S +T L +G ++ +V +Q +RL + +LH GI+HLV N + + +E
Sbjct: 31 FLGGSENTNVLMKMGAMNNFAVVAGHQWWRLFMAQFLHIGIMHLVSNAIIIYYMGQYMEP 90
Query: 123 EFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYA 182
G R YLL+G GG+L+S + +S GAS ALFGL G M + + N ++
Sbjct: 91 LMGHVRFLVTYLLAGVGGNLMSLAFSADRG--LSAGASTALFGLFGAMTAIGLRN--LHN 146
Query: 183 NKCTSLSVLGSVIAL-NLAFG-FIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGY 237
L V+AL NLA F+P G+D HIGG +G LL IL R Y
Sbjct: 147 PMIAFLGRQAFVLALINLALDIFVP---GIDIWGHIGGLIAGFLLAIILGDRVMKTY 200
>gi|398304447|ref|ZP_10508033.1| hypothetical protein BvalD_02972 [Bacillus vallismortis DV1-F-3]
Length = 507
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +RLL+ + LH GI+HL N +L V +E+ +G R +YL +G
Sbjct: 210 GAKENSLIAAGEWWRLLTPIVLHIGIVHLAFNTLALWSVGTEVERMYGSGRFLLIYLAAG 269
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIAL 197
GS+ S + S GASGA+FG LG +L ++N ++ + + +I +
Sbjct: 270 ITGSIASFVFSP----YPSAGASGAIFGCLGALLYVALSNRKMFFRTIGTNII--VIIII 323
Query: 198 NLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAA 245
NL FGF V +DN HIGG G L L PQ G + + ++A
Sbjct: 324 NLGFGF--AVSHIDNSGHIGGLIGGFFAAAALGL-PQAGALGRRLLSA 368
>gi|365157863|ref|ZP_09354108.1| hypothetical protein HMPREF1015_00268 [Bacillus smithii 7_3_47FAA]
gi|363622533|gb|EHL73692.1| hypothetical protein HMPREF1015_00268 [Bacillus smithii 7_3_47FAA]
Length = 397
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 78 GLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSG 137
G N ++ + +R + ++LH G++HL++N +L + +E+ FG R +YL SG
Sbjct: 216 GAKFNPLILDGEWWRFFTPIFLHIGVLHLLMNTMALYYLGTMVEKIFGRWRFLWIYLFSG 275
Query: 138 FGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLG----S 193
F GS+ S + +S GASGA+FG G +L + + N+ +G
Sbjct: 276 FLGSVASFVFTPN----LSAGASGAIFGCFGALL------FFGFVNRSLFFRTIGMNVIV 325
Query: 194 VIALNLAFGFIPGVDGVDNLAHIGGFASGVL 224
VI +NL FGF V G+DN HIGG G L
Sbjct: 326 VIIINLIFGFT--VPGIDNSGHIGGLIGGFL 354
>gi|300742642|ref|ZP_07072663.1| rhomboid family protein [Rothia dentocariosa M567]
gi|300381827|gb|EFJ78389.1| rhomboid family protein [Rothia dentocariosa M567]
Length = 261
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 11/136 (8%)
Query: 89 QKYRLLSSMWLHA--GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ YR+L+S +LH+ H+V+NM SL + LEQ G+ R +YLLS GGS L
Sbjct: 114 EYYRVLTSGFLHSQNDYSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLLSIVGGSFGVLL 173
Query: 147 HHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIPG 206
E+ VGASG +FGL+G L ++ + ++ L +IA+N+AFGF+
Sbjct: 174 LDDPTAEV--VGASGGIFGLIGAYLVIMVI-----LRERDNIRALMIMIAVNVAFGFL-- 224
Query: 207 VDGVDNLAHIGGFASG 222
V G+ AH GGF G
Sbjct: 225 VPGISWQAHAGGFVVG 240
>gi|293193637|ref|ZP_06609859.1| rhomboid family protein [Actinomyces odontolyticus F0309]
gi|292819869|gb|EFF78872.1| rhomboid family protein [Actinomyces odontolyticus F0309]
Length = 292
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 89 QKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGS---LLSC 145
+ +L+ +LH GI+H++ NM SL V +E G R LYL+S GGS L+ C
Sbjct: 111 HPWTVLTGAFLHGGIMHILFNMLSLYWVGRAIEPVLGRWRFLTLYLVSALGGSAFILVWC 170
Query: 146 LHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFIP 205
L + + +VGASGA+FGL G A + + + + + +++ +NL +GF+
Sbjct: 171 LIQPSEIFVSTVGASGAVFGLFG-------AVFVLQRLGGSDTTAILTLLGINLVYGFM- 222
Query: 206 GVDGVDNLAHIGGFASGVLLGFIL--FLRPQYG 236
V G+ HIGG +GV ++L RP+ G
Sbjct: 223 -VSGISWQGHIGGAIAGVGATWVLVHMARPRPG 254
>gi|256763410|ref|ZP_05503990.1| membrane-associated serine protease [Enterococcus faecalis T3]
gi|256684661|gb|EEU24356.1| membrane-associated serine protease [Enterococcus faecalis T3]
Length = 230
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+I L + G + R L+ + ++ +R ++ ++LH G +H+++NM +L + ++E +G R
Sbjct: 35 NILNLVNWGAMVRPLVAQNHEYWRFITPIFLHIGFMHIILNMVTLYYIGAQVEAIYGHWR 94
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG G++ S G VS GAS ALFGL G +I N
Sbjct: 95 YLGIYLLSGIAGNIASFAF--GTPNSVSAGASTALFGLFGAF---VILGRHFRDNPAIMY 149
Query: 189 SV--LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
V I +NL F VD + H+GG G+L +A
Sbjct: 150 MVQRYSMFIVINLLFNLFS--SSVDMMGHVGGLIGGLL------------------VATA 189
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVL 273
+ +RQ + ++++ + I LV+
Sbjct: 190 FAVPNRQEAFNKHERIMATLIFIFLVV 216
>gi|357453415|ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]
gi|355486032|gb|AES67235.1| Rhomboid family member [Medicago truncatula]
Length = 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 33 VNNCPAKTADSHQCVLRDILGRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYR 92
V PA ADS L G P N L+G S TL +G + R + YR
Sbjct: 98 VPGSPA-AADSADLGLESFGGDI-IAPITHNPLMGSSPLTLVKMGAMYFQKSDRLHHAYR 155
Query: 93 LLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKK 152
L + +WLHAG+I L++NM +++ LE++FG+ RIA L+ +SG G +L S L
Sbjct: 156 LFTCLWLHAGVIDLLLNMLNILYYYIYLEKKFGYIRIAILHTMSGMGSNLFSAL---CIP 212
Query: 153 EIVSVGASG 161
VSVGASG
Sbjct: 213 TSVSVGASG 221
>gi|256958014|ref|ZP_05562185.1| membrane-associated serine protease [Enterococcus faecalis DS5]
gi|256948510|gb|EEU65142.1| membrane-associated serine protease [Enterococcus faecalis DS5]
Length = 236
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 69 SISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFAR 128
+I L + G + R L+ + ++ +R ++ M+LH G +H+++NM ++ + ++E +G R
Sbjct: 41 NILNLVNWGAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTIYYIGAQVEAIYGHWR 100
Query: 129 IAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSL 188
+YLLSG G++ S G VS GAS ALFGL G +I N
Sbjct: 101 YLGIYLLSGIAGNIASFAF--GTPNSVSAGASTALFGLFGAF---VILGRHFRDNPAIMY 155
Query: 189 SV--LGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAG 246
V I +NL F VD + H+GG G+L +A
Sbjct: 156 MVQRYSMFIVINLLFNLFS--SSVDMMGHVGGLIGGLL------------------VATA 195
Query: 247 YDAKHRQPKYMHYQQLCWIIALILLVL 273
+ +R+ + ++++ + I LV+
Sbjct: 196 FAVPNREEAFNKHERIMATLIFIFLVV 222
>gi|390604748|gb|EIN14139.1| rhomboid-domain-containing protein, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 350
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 26/164 (15%)
Query: 88 NQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLH 147
NQ +R ++ ++LHAGI+H+++NM + + VS ++E+E G Y +G G++L
Sbjct: 122 NQWFRFITPIFLHAGIVHILLNMVAQLTVSAQIEREMGSGGFLLTYFAAGIFGNVLG--- 178
Query: 148 HKGKKEIV---SVGASGALFGLLGTMLSELIANWTI-----------------YANKCTS 187
G +V S GASGA+FG + +L+A+W +A+
Sbjct: 179 --GNFALVGLPSTGASGAIFGTVAVTWVDLLAHWRYHYRPGRKASLDGLMRLSFADSPVQ 236
Query: 188 LSVLGSVIALNLAFGFIPGVDGVD-NLAHIGGFASGVLLGFILF 230
L+ + + L +A G+IP ++ LAH+GGF G+L+G +
Sbjct: 237 LAWMIVELLLGVAMGYIPCKLTLNLPLAHLGGFLMGLLVGMFFY 280
>gi|400976038|ref|ZP_10803269.1| rhomboid family membrane protein [Salinibacterium sp. PAMC 21357]
Length = 216
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 14/160 (8%)
Query: 87 KNQKYRLLSSMWLHA--GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLS 144
++ +R+++S +LH+ + H+ NM +L + LE G AR LYL+S GGS+
Sbjct: 49 ASEPWRMITSAFLHSPSSLFHVGFNMFTLFIFGRLLEIPLGRARFISLYLISALGGSVAV 108
Query: 145 CLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALNLAFGFI 204
L G V +GASGA+FG++ A + I + VL V+ +NL GFI
Sbjct: 109 LLISPGA---VVLGASGAIFGIVA-------AFFVIQRRMGINNRVLLIVLGINLVVGFI 158
Query: 205 PGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIA 244
PG + + AH+GG +G LL I FLR + + IA
Sbjct: 159 PGFN-ISWEAHVGGLVTGALLALI-FLRQRSTKSANSEIA 196
>gi|73662516|ref|YP_301297.1| hypothetical protein SSP1207 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495031|dbj|BAE18352.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 485
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 35/211 (16%)
Query: 64 YLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTSLMLVSYRLEQE 123
+L S L D+GGL +V + YRL++S++LH H+++NM SL + +E
Sbjct: 176 FLNRSSDLKLLDIGGLVHFNVVH-GEWYRLITSIFLHYNFEHILMNMLSLFIFGKIVESI 234
Query: 124 FGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLSELIANWTIYAN 183
G R+ +YL++G G+ S + + VSVGASGA+FGL+G + + +Y
Sbjct: 235 VGHWRMFVIYLVAGLFGNFASLSFN---TDTVSVGASGAIFGLIGAIFT------FMYIG 285
Query: 184 KCTSLSVLGS-VIALNLAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKY 242
K + ++G +I L + G + ++ +AHIGGF G+L+ +
Sbjct: 286 KQFNRKLIGQLLIVLVIMIGLSLFMQNINIVAHIGGFIGGLLITLM-------------- 331
Query: 243 IAAGYDAKHRQPKYMHYQQLCWIIALILLVL 273
GY K + ++ WII + +LVL
Sbjct: 332 ---GYYFKTNKTRF-------WIILITILVL 352
>gi|295129855|ref|YP_003580518.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
SK137]
gi|417931189|ref|ZP_12574562.1| peptidase, S54 family [Propionibacterium acnes SK182]
gi|291376681|gb|ADE00536.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
SK137]
gi|340769512|gb|EGR92036.1| peptidase, S54 family [Propionibacterium acnes SK182]
Length = 302
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 88 NQKYRLLSSMWLHA-GIIHLVVNMTSLMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCL 146
+ +R ++SM+ HA I H+ NM +L + LE G AR YL+SG GG L CL
Sbjct: 124 TEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCL 183
Query: 147 --HHKGKKEIVS------VGASGALFGLLGTMLSELIANWTIYANKCTSLSVLGSVIALN 198
G + I+ VGASGA+FGL G +L + S L V+A+N
Sbjct: 184 MATADGGRAILPNVDDGVVGASGAIFGLFGVLL-------IVQRRLGASTRELWVVLAIN 236
Query: 199 LAFGFIPGVDGVDNLAHIGGFASGVLLGFILFLRPQYGYVSEKYIAAGYDAK 250
A + G+ AH+GGF G++ G I F P K I AG A+
Sbjct: 237 AALLLF--ISGIAWQAHLGGFLVGMMCGVIFFEDP-------KRIQAGKSAQ 279
>gi|145503155|ref|XP_001437555.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404705|emb|CAK70158.1| unnamed protein product [Paramecium tetraurelia]
Length = 277
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 97/234 (41%), Gaps = 31/234 (13%)
Query: 2 ENKPYAPEQWRAWLT---------PVIFVVCIIMFVYTMHVNNCPAKTADSHQCVLRDIL 52
E +PY P Q + + V II F+ H K + + D
Sbjct: 14 ELRPYKPTQEQTFFERFSYQSLTFKTTVVQFIIFFLTIFHTVYLTEKYLEDDE----DES 69
Query: 53 GRYSFQPWKENYLLGPSISTLRDLGGLDRNLIVRKNQKYRLLSSMWLHAGIIHLVVNMTS 112
YSF+ L G I+ + Q +RL+ ++LH H++ NM
Sbjct: 70 DIYSFE------------CVLYTWGSKHTPSIIYRFQFWRLVCPIFLHGSFSHIIGNMMV 117
Query: 113 LMLVSYRLEQEFGFARIAPLYLLSGFGGSLLSCLHHKGKKEIVSVGASGALFGLLGTMLS 172
+ + LE G+ R++ LY++ G G SL SC+ + SVGASG++F LL
Sbjct: 118 QIYYGFILELTHGWKRVSILYIVGGIGASLFSCVRFYSE---TSVGASGSIFALLAL--- 171
Query: 173 ELIANWTIYANKCTSLSVLGSVIALNLAFGFIPGVDGVDNLAHIGGFASGVLLG 226
ELI T + V+ ++A + FI VD H+GG G+L+G
Sbjct: 172 ELIYFITAFPGIEPKRIVVFILLAPMIFLSFIDAPPQVDIAGHLGGLVVGLLIG 225
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.142 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,506,306,344
Number of Sequences: 23463169
Number of extensions: 185900159
Number of successful extensions: 577566
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2843
Number of HSP's successfully gapped in prelim test: 2697
Number of HSP's that attempted gapping in prelim test: 566397
Number of HSP's gapped (non-prelim): 6202
length of query: 277
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 137
effective length of database: 9,074,351,707
effective search space: 1243186183859
effective search space used: 1243186183859
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 76 (33.9 bits)