Query 023794
Match_columns 277
No_of_seqs 322 out of 1209
Neff 11.8
Searched_HMMs 46136
Date Fri Mar 29 06:43:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023794.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023794hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 4.8E-38 1E-42 243.6 21.4 243 3-257 26-294 (294)
2 KOG2564 Predicted acetyltransf 100.0 1.6E-37 3.4E-42 222.1 16.3 255 5-259 73-329 (343)
3 PLN02679 hydrolase, alpha/beta 100.0 6.8E-37 1.5E-41 242.2 21.3 246 6-258 88-358 (360)
4 PRK03592 haloalkane dehalogena 100.0 1.2E-36 2.6E-41 236.0 21.8 248 5-259 26-291 (295)
5 TIGR02240 PHA_depoly_arom poly 100.0 9.4E-37 2E-41 234.2 20.4 238 5-259 24-268 (276)
6 PLN02965 Probable pheophorbida 100.0 6.1E-37 1.3E-41 232.5 15.3 239 8-258 5-254 (255)
7 PRK00870 haloalkane dehalogena 100.0 1E-35 2.2E-40 231.3 21.1 246 5-257 45-301 (302)
8 PRK10349 carboxylesterase BioH 100.0 3.8E-35 8.3E-40 223.1 22.3 237 2-256 9-255 (256)
9 KOG4178 Soluble epoxide hydrol 100.0 8.8E-36 1.9E-40 220.4 17.5 246 5-257 43-320 (322)
10 PLN03084 alpha/beta hydrolase 100.0 1.2E-34 2.6E-39 228.2 25.1 247 5-256 126-383 (383)
11 PRK03204 haloalkane dehalogena 100.0 6E-35 1.3E-39 224.6 22.2 241 5-254 33-285 (286)
12 PRK11126 2-succinyl-6-hydroxy- 100.0 2.1E-34 4.5E-39 217.5 22.5 229 5-256 1-241 (242)
13 PRK10673 acyl-CoA esterase; Pr 100.0 1.3E-34 2.9E-39 220.3 20.6 235 5-256 15-254 (255)
14 PRK06489 hypothetical protein; 100.0 2.3E-34 5.1E-39 228.2 20.6 240 6-258 69-358 (360)
15 TIGR03611 RutD pyrimidine util 100.0 6.9E-34 1.5E-38 216.6 22.3 239 4-255 11-256 (257)
16 PLN03087 BODYGUARD 1 domain co 100.0 8.2E-34 1.8E-38 227.6 23.1 246 6-257 201-479 (481)
17 TIGR03056 bchO_mg_che_rel puta 100.0 2.8E-34 6E-39 221.3 19.5 238 5-255 27-278 (278)
18 PLN02578 hydrolase 100.0 1.9E-33 4.2E-38 222.4 23.3 240 5-255 85-353 (354)
19 PLN02385 hydrolase; alpha/beta 100.0 1.4E-33 3E-38 223.2 21.6 240 5-258 86-346 (349)
20 PF12697 Abhydrolase_6: Alpha/ 100.0 1.5E-33 3.3E-38 210.6 20.6 220 9-249 1-228 (228)
21 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.6E-34 5.7E-39 221.8 16.8 236 5-256 29-282 (282)
22 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.9E-33 6.3E-38 212.2 19.4 230 5-255 12-251 (251)
23 TIGR01738 bioH putative pimelo 100.0 3.6E-33 7.8E-38 211.1 19.1 233 3-254 1-245 (245)
24 PRK08775 homoserine O-acetyltr 100.0 3.8E-32 8.1E-37 214.4 21.6 249 3-258 54-340 (343)
25 KOG1454 Predicted hydrolase/ac 100.0 3.4E-33 7.5E-38 215.4 15.0 245 5-258 57-325 (326)
26 PHA02857 monoglyceride lipase; 100.0 8.5E-32 1.8E-36 207.0 20.3 232 5-257 24-273 (276)
27 PLN02298 hydrolase, alpha/beta 100.0 1.6E-31 3.4E-36 210.3 22.2 234 5-258 58-318 (330)
28 KOG4409 Predicted hydrolase/ac 100.0 4E-32 8.7E-37 201.7 15.7 248 4-257 88-364 (365)
29 PRK14875 acetoin dehydrogenase 100.0 1.2E-31 2.5E-36 214.9 19.8 238 5-256 130-370 (371)
30 PRK00175 metX homoserine O-ace 100.0 3.1E-31 6.6E-36 211.3 21.3 251 5-259 47-376 (379)
31 PRK07581 hypothetical protein; 100.0 1.5E-31 3.3E-36 211.1 19.2 247 6-258 41-337 (339)
32 TIGR03695 menH_SHCHC 2-succiny 100.0 1.2E-31 2.5E-36 203.3 17.8 240 6-255 1-251 (251)
33 PLN02211 methyl indole-3-aceta 100.0 5.9E-32 1.3E-36 206.1 16.0 242 4-257 16-270 (273)
34 TIGR01250 pro_imino_pep_2 prol 100.0 1.4E-30 3E-35 201.6 22.4 242 5-255 24-288 (288)
35 PLN02894 hydrolase, alpha/beta 100.0 1.6E-30 3.4E-35 208.0 22.7 253 5-262 104-390 (402)
36 TIGR01392 homoserO_Ac_trn homo 100.0 1.3E-30 2.8E-35 206.3 21.1 243 5-255 30-351 (351)
37 PRK10749 lysophospholipase L2; 100.0 2.4E-31 5.3E-36 208.6 16.7 243 5-257 53-329 (330)
38 PLN02980 2-oxoglutarate decarb 100.0 1.7E-30 3.6E-35 236.6 21.2 239 5-259 1370-1641(1655)
39 PLN02652 hydrolase; alpha/beta 100.0 1.6E-29 3.6E-34 200.5 21.9 242 3-259 133-389 (395)
40 COG1647 Esterase/lipase [Gener 100.0 8.1E-29 1.8E-33 172.1 16.0 221 5-256 14-243 (243)
41 KOG2382 Predicted alpha/beta h 100.0 1.8E-28 4E-33 181.8 18.8 246 4-258 50-314 (315)
42 PLN02511 hydrolase 100.0 7.6E-29 1.6E-33 197.6 16.5 242 4-259 98-367 (388)
43 KOG1455 Lysophospholipase [Lip 100.0 2.2E-28 4.7E-33 178.5 17.2 241 5-257 53-312 (313)
44 COG2267 PldB Lysophospholipase 100.0 4.2E-28 9.2E-33 185.5 18.5 239 7-259 35-296 (298)
45 TIGR01249 pro_imino_pep_1 prol 100.0 7.4E-28 1.6E-32 187.3 18.2 104 5-113 26-131 (306)
46 PRK05855 short chain dehydroge 100.0 1.5E-27 3.2E-32 202.1 18.8 248 5-259 24-294 (582)
47 KOG2984 Predicted hydrolase [G 99.9 9E-27 1.9E-31 159.4 13.1 229 2-257 38-276 (277)
48 PRK06765 homoserine O-acetyltr 99.9 2.7E-25 5.8E-30 175.8 21.7 248 5-256 55-387 (389)
49 TIGR03100 hydr1_PEP hydrolase, 99.9 4.6E-25 1E-29 168.5 20.7 231 5-256 25-274 (274)
50 PRK10985 putative hydrolase; P 99.9 2.7E-25 5.8E-30 174.0 19.6 248 5-258 57-321 (324)
51 TIGR01607 PST-A Plasmodium sub 99.9 6.2E-25 1.4E-29 171.9 19.7 233 5-255 20-331 (332)
52 PF00561 Abhydrolase_1: alpha/ 99.9 1.9E-25 4E-30 167.4 14.6 213 33-251 1-229 (230)
53 PRK05077 frsA fermentation/res 99.9 1.1E-23 2.3E-28 168.8 21.6 213 5-257 193-412 (414)
54 PRK11071 esterase YqiA; Provis 99.9 2.9E-24 6.2E-29 154.4 15.8 183 7-255 2-189 (190)
55 PRK13604 luxD acyl transferase 99.9 6.9E-23 1.5E-27 154.1 18.0 218 5-258 36-260 (307)
56 PRK10566 esterase; Provisional 99.9 8.3E-22 1.8E-26 149.3 19.8 202 5-257 26-248 (249)
57 COG0596 MhpC Predicted hydrola 99.9 1.4E-21 3E-26 149.5 19.0 238 6-255 21-280 (282)
58 TIGR01836 PHA_synth_III_C poly 99.9 1.2E-21 2.5E-26 155.3 17.9 103 6-113 62-172 (350)
59 PRK07868 acyl-CoA synthetase; 99.9 2.6E-21 5.7E-26 171.5 20.9 251 5-259 66-363 (994)
60 PLN02872 triacylglycerol lipas 99.9 5.9E-22 1.3E-26 156.9 14.6 107 5-112 73-197 (395)
61 TIGR01838 PHA_synth_I poly(R)- 99.9 1E-20 2.2E-25 154.0 18.4 230 5-243 187-461 (532)
62 PF03096 Ndr: Ndr family; Int 99.9 2.7E-20 5.8E-25 137.3 15.0 234 5-257 22-279 (283)
63 TIGR03101 hydr2_PEP hydrolase, 99.9 1.2E-20 2.5E-25 141.5 13.4 106 6-113 25-135 (266)
64 PF06342 DUF1057: Alpha/beta h 99.9 1.2E-18 2.6E-23 127.0 22.3 106 3-113 32-138 (297)
65 COG0429 Predicted hydrolase of 99.8 9.1E-20 2E-24 135.6 16.3 247 5-257 74-340 (345)
66 KOG2931 Differentiation-relate 99.8 5.8E-19 1.3E-23 128.4 19.8 236 5-259 45-308 (326)
67 PF12695 Abhydrolase_5: Alpha/ 99.8 6.3E-20 1.4E-24 127.4 14.5 140 8-237 1-145 (145)
68 PRK11460 putative hydrolase; P 99.8 8.2E-19 1.8E-23 130.5 17.3 173 3-254 13-209 (232)
69 KOG1552 Predicted alpha/beta h 99.8 1.5E-19 3.2E-24 130.0 12.7 187 6-259 60-254 (258)
70 KOG1838 Alpha/beta hydrolase [ 99.8 6.9E-19 1.5E-23 135.6 17.2 249 4-258 123-389 (409)
71 COG3208 GrsT Predicted thioest 99.8 1.2E-18 2.6E-23 124.5 17.0 223 5-257 6-236 (244)
72 KOG4391 Predicted alpha/beta h 99.8 1.2E-19 2.5E-24 126.2 8.9 199 4-259 76-284 (300)
73 PLN00021 chlorophyllase 99.8 3.6E-17 7.7E-22 126.1 18.3 107 3-113 49-167 (313)
74 KOG4667 Predicted esterase [Li 99.8 2E-17 4.2E-22 115.1 15.0 218 5-256 32-257 (269)
75 COG2021 MET2 Homoserine acetyl 99.8 2.1E-16 4.6E-21 119.7 20.4 243 6-256 51-367 (368)
76 TIGR02821 fghA_ester_D S-formy 99.8 1.5E-16 3.2E-21 121.8 19.9 108 5-113 41-174 (275)
77 PF00975 Thioesterase: Thioest 99.8 2.1E-16 4.6E-21 118.2 20.3 102 7-113 1-105 (229)
78 PLN02442 S-formylglutathione h 99.8 1.3E-16 2.7E-21 122.4 18.3 110 3-113 44-179 (283)
79 KOG2565 Predicted hydrolases o 99.8 6.7E-17 1.5E-21 121.4 15.9 107 5-115 151-267 (469)
80 TIGR03230 lipo_lipase lipoprot 99.8 1.9E-17 4.1E-22 131.3 13.6 108 4-113 39-155 (442)
81 PF00326 Peptidase_S9: Prolyl 99.8 2.5E-17 5.4E-22 121.7 12.9 192 22-259 3-211 (213)
82 COG1506 DAP2 Dipeptidyl aminop 99.7 4.2E-16 9.2E-21 131.7 17.1 206 7-259 395-618 (620)
83 TIGR01840 esterase_phb esteras 99.7 5.9E-16 1.3E-20 114.1 15.0 108 4-112 11-130 (212)
84 cd00707 Pancreat_lipase_like P 99.7 1.2E-16 2.5E-21 121.6 10.3 109 3-113 33-148 (275)
85 COG2945 Predicted hydrolase of 99.7 4.8E-15 1E-19 101.6 15.1 169 5-255 27-205 (210)
86 PF02230 Abhydrolase_2: Phosph 99.7 1.5E-15 3.3E-20 112.1 12.6 177 3-257 11-215 (216)
87 PF01738 DLH: Dienelactone hyd 99.7 2.4E-15 5.3E-20 111.4 13.4 176 5-257 13-217 (218)
88 PF05448 AXE1: Acetyl xylan es 99.7 4E-14 8.6E-19 109.5 20.4 212 4-256 81-319 (320)
89 PF08538 DUF1749: Protein of u 99.7 6.5E-15 1.4E-19 110.1 15.1 235 5-255 32-303 (303)
90 PRK10162 acetyl esterase; Prov 99.6 8.8E-14 1.9E-18 108.6 19.5 104 5-113 80-196 (318)
91 PF05728 UPF0227: Uncharacteri 99.6 1.1E-13 2.4E-18 98.2 17.4 180 9-254 2-186 (187)
92 COG0400 Predicted esterase [Ge 99.6 5.9E-14 1.3E-18 100.8 13.5 172 4-257 16-205 (207)
93 PF06821 Ser_hydrolase: Serine 99.6 5.1E-15 1.1E-19 103.9 7.9 153 9-242 1-158 (171)
94 PF06500 DUF1100: Alpha/beta h 99.6 2.2E-14 4.8E-19 111.9 11.9 213 5-257 189-409 (411)
95 PF10230 DUF2305: Uncharacteri 99.6 5.1E-13 1.1E-17 101.1 18.4 107 6-112 2-122 (266)
96 COG0412 Dienelactone hydrolase 99.6 6.2E-13 1.3E-17 98.7 18.1 174 7-258 28-234 (236)
97 TIGR01839 PHA_synth_II poly(R) 99.6 5.3E-13 1.1E-17 108.3 18.0 105 6-114 215-330 (560)
98 COG3319 Thioesterase domains o 99.6 4.4E-13 9.5E-18 99.3 16.0 102 7-113 1-104 (257)
99 PF02273 Acyl_transf_2: Acyl t 99.6 3.7E-13 8.1E-18 96.0 14.4 207 5-243 29-242 (294)
100 TIGR03502 lipase_Pla1_cef extr 99.6 6.2E-14 1.3E-18 118.3 12.2 91 6-96 449-575 (792)
101 TIGR01849 PHB_depoly_PhaZ poly 99.5 1.5E-12 3.2E-17 102.7 18.3 103 7-115 103-211 (406)
102 PRK10252 entF enterobactin syn 99.5 8.5E-13 1.8E-17 122.0 17.7 102 5-112 1067-1171(1296)
103 TIGR00976 /NonD putative hydro 99.5 2.9E-13 6.4E-18 113.5 9.7 106 5-113 21-133 (550)
104 PF12146 Hydrolase_4: Putative 99.5 1.7E-13 3.7E-18 82.9 5.8 64 5-68 15-79 (79)
105 COG3571 Predicted hydrolase of 99.4 2.3E-11 5E-16 81.1 14.2 180 3-256 11-210 (213)
106 PF07859 Abhydrolase_3: alpha/ 99.4 2.3E-11 5.1E-16 89.8 15.9 98 9-114 1-112 (211)
107 COG4757 Predicted alpha/beta h 99.4 3.5E-12 7.7E-17 90.3 10.4 233 8-254 32-280 (281)
108 COG3458 Acetyl esterase (deace 99.4 4.5E-12 9.7E-17 91.9 10.8 211 4-258 81-318 (321)
109 PF12740 Chlorophyllase2: Chlo 99.4 3.6E-11 7.7E-16 88.7 14.4 107 5-113 16-132 (259)
110 PTZ00472 serine carboxypeptida 99.4 1E-10 2.2E-15 95.4 18.1 109 5-113 76-217 (462)
111 PRK10115 protease 2; Provision 99.4 2.6E-11 5.5E-16 103.7 15.3 108 4-113 443-560 (686)
112 COG3545 Predicted esterase of 99.4 5E-11 1.1E-15 81.2 13.5 169 7-256 3-178 (181)
113 KOG1515 Arylacetamide deacetyl 99.4 3.4E-10 7.3E-15 87.5 19.9 220 5-257 89-335 (336)
114 PF07819 PGAP1: PGAP1-like pro 99.4 1.7E-11 3.7E-16 90.4 12.1 107 5-115 3-126 (225)
115 PF09752 DUF2048: Uncharacteri 99.4 3.4E-10 7.3E-15 86.5 18.6 236 4-255 90-347 (348)
116 PF03959 FSH1: Serine hydrolas 99.3 3.1E-11 6.7E-16 88.7 10.8 161 5-242 3-206 (212)
117 PF07224 Chlorophyllase: Chlor 99.3 1.5E-10 3.3E-15 83.9 12.3 109 5-114 45-159 (307)
118 PF10503 Esterase_phd: Esteras 99.3 4.3E-10 9.3E-15 81.9 14.7 107 5-112 15-132 (220)
119 PF06028 DUF915: Alpha/beta hy 99.3 1.4E-10 3.1E-15 86.4 12.4 109 5-113 10-144 (255)
120 KOG2624 Triglyceride lipase-ch 99.3 1.4E-10 3.1E-15 91.4 12.7 109 4-112 71-199 (403)
121 PF06057 VirJ: Bacterial virul 99.2 3E-10 6.4E-15 79.3 12.2 100 8-113 4-108 (192)
122 PRK04940 hypothetical protein; 99.2 4.8E-09 1E-13 73.2 17.9 173 9-256 2-179 (180)
123 COG0657 Aes Esterase/lipase [L 99.2 1.5E-09 3.2E-14 85.1 17.5 103 5-115 78-194 (312)
124 COG3243 PhaC Poly(3-hydroxyalk 99.2 2E-09 4.3E-14 83.6 16.7 105 6-114 107-219 (445)
125 PRK05371 x-prolyl-dipeptidyl a 99.2 1.7E-09 3.6E-14 93.5 18.1 84 27-113 273-374 (767)
126 smart00824 PKS_TE Thioesterase 99.2 1.5E-09 3.3E-14 80.0 15.8 96 11-112 2-102 (212)
127 COG4188 Predicted dienelactone 99.2 2.6E-11 5.6E-16 92.7 6.2 95 4-98 69-181 (365)
128 KOG3975 Uncharacterized conser 99.2 7E-09 1.5E-13 74.7 17.8 109 2-111 25-146 (301)
129 PF02129 Peptidase_S15: X-Pro 99.2 3.6E-10 7.8E-15 86.6 12.0 106 4-112 18-136 (272)
130 PF03403 PAF-AH_p_II: Platelet 99.2 4E-10 8.6E-15 89.5 10.8 105 5-111 99-261 (379)
131 PF05990 DUF900: Alpha/beta hy 99.1 9.4E-10 2E-14 81.7 10.9 110 4-113 16-138 (233)
132 KOG4627 Kynurenine formamidase 99.1 3.8E-10 8.3E-15 78.6 8.1 190 5-254 66-268 (270)
133 PF12715 Abhydrolase_7: Abhydr 99.1 2.1E-10 4.6E-15 88.5 7.3 105 5-111 114-259 (390)
134 PF00450 Peptidase_S10: Serine 99.1 6.5E-09 1.4E-13 84.9 15.5 111 4-114 38-183 (415)
135 PF08840 BAAT_C: BAAT / Acyl-C 99.1 7E-11 1.5E-15 86.6 3.4 50 61-112 7-56 (213)
136 KOG2551 Phospholipase/carboxyh 99.1 1.3E-08 2.8E-13 72.3 14.3 175 5-256 4-223 (230)
137 PF01674 Lipase_2: Lipase (cla 99.1 1.8E-10 4E-15 83.7 4.3 88 7-96 2-95 (219)
138 KOG3043 Predicted hydrolase re 99.0 5.3E-09 1.1E-13 74.2 10.8 171 7-257 40-240 (242)
139 PF00151 Lipase: Lipase; Inte 99.0 3.4E-10 7.4E-15 88.0 4.8 108 4-113 69-188 (331)
140 KOG2100 Dipeptidyl aminopeptid 99.0 1.2E-08 2.7E-13 87.9 14.5 202 5-260 525-750 (755)
141 PF05677 DUF818: Chlamydia CHL 99.0 6.6E-08 1.4E-12 73.4 16.3 90 5-98 136-237 (365)
142 PLN02733 phosphatidylcholine-s 99.0 2.1E-09 4.6E-14 86.6 8.7 95 17-115 105-204 (440)
143 KOG2281 Dipeptidyl aminopeptid 98.9 1.9E-08 4.1E-13 81.9 12.1 205 3-256 639-866 (867)
144 KOG2112 Lysophospholipase [Lip 98.8 6.9E-08 1.5E-12 68.1 10.6 104 6-110 3-126 (206)
145 KOG1553 Predicted alpha/beta h 98.8 3.1E-08 6.8E-13 74.8 9.0 110 3-116 240-349 (517)
146 PLN02606 palmitoyl-protein thi 98.8 1.8E-06 3.8E-11 65.3 17.8 103 5-112 25-132 (306)
147 COG4814 Uncharacterized protei 98.8 6.9E-07 1.5E-11 64.9 14.5 106 7-112 46-176 (288)
148 PF11339 DUF3141: Protein of u 98.8 1.9E-06 4.2E-11 69.2 18.3 82 24-112 92-175 (581)
149 PF03583 LIP: Secretory lipase 98.8 1.4E-07 3E-12 72.7 11.7 81 25-111 19-112 (290)
150 COG3509 LpqC Poly(3-hydroxybut 98.7 1.1E-07 2.4E-12 70.6 9.5 107 4-112 59-179 (312)
151 PF02089 Palm_thioest: Palmito 98.7 8.6E-08 1.9E-12 71.7 8.1 105 5-111 4-115 (279)
152 KOG4840 Predicted hydrolases o 98.7 1.3E-06 2.9E-11 62.1 13.3 101 5-114 35-146 (299)
153 PF12048 DUF3530: Protein of u 98.7 6.3E-06 1.4E-10 64.1 18.2 107 5-111 86-228 (310)
154 PF05705 DUF829: Eukaryotic pr 98.7 4.9E-06 1.1E-10 62.7 17.1 219 8-254 1-240 (240)
155 PF05057 DUF676: Putative seri 98.7 1E-07 2.2E-12 70.3 7.8 89 5-95 3-97 (217)
156 KOG3253 Predicted alpha/beta h 98.6 5.5E-07 1.2E-11 73.1 10.4 177 5-259 175-380 (784)
157 PLN02633 palmitoyl protein thi 98.6 1.5E-05 3.3E-10 60.4 17.1 102 5-111 24-130 (314)
158 KOG3847 Phospholipase A2 (plat 98.6 7.1E-07 1.5E-11 66.8 9.6 106 3-110 115-273 (399)
159 PF05577 Peptidase_S28: Serine 98.6 7.5E-07 1.6E-11 73.2 10.9 106 5-112 28-148 (434)
160 PF04301 DUF452: Protein of un 98.5 2.6E-06 5.7E-11 61.5 11.5 80 5-112 10-90 (213)
161 COG3150 Predicted esterase [Ge 98.5 1.5E-05 3.2E-10 54.3 14.0 87 9-111 2-90 (191)
162 COG1075 LipA Predicted acetylt 98.5 4.3E-07 9.3E-12 71.5 8.0 102 6-113 59-165 (336)
163 COG4099 Predicted peptidase [G 98.5 5.1E-07 1.1E-11 67.1 7.4 102 7-111 192-303 (387)
164 COG4782 Uncharacterized protei 98.5 1.1E-06 2.4E-11 67.4 9.4 107 4-111 114-233 (377)
165 PF00756 Esterase: Putative es 98.5 2.2E-07 4.8E-12 70.6 5.2 56 57-113 96-151 (251)
166 PLN02209 serine carboxypeptida 98.5 1.6E-05 3.4E-10 64.8 15.9 109 5-113 67-213 (437)
167 PRK10439 enterobactin/ferric e 98.5 3.2E-06 6.9E-11 68.3 11.7 106 5-111 208-322 (411)
168 PLN03016 sinapoylglucose-malat 98.4 4.7E-05 1E-09 62.0 17.3 108 5-112 65-210 (433)
169 PF02450 LCAT: Lecithin:choles 98.4 4E-06 8.7E-11 67.5 9.7 87 21-116 66-164 (389)
170 KOG2541 Palmitoyl protein thio 98.2 2E-05 4.3E-10 58.0 10.2 98 7-111 24-127 (296)
171 COG2936 Predicted acyl esteras 98.2 1.6E-06 3.5E-11 71.1 5.1 107 4-113 43-160 (563)
172 PF10340 DUF2424: Protein of u 98.2 2.6E-05 5.6E-10 61.2 11.1 106 5-115 121-238 (374)
173 cd00312 Esterase_lipase Estera 98.2 6.1E-06 1.3E-10 69.1 8.2 107 3-112 92-213 (493)
174 KOG3724 Negative regulator of 98.2 8.7E-06 1.9E-10 68.5 8.6 103 5-112 88-220 (973)
175 KOG2183 Prolylcarboxypeptidase 98.1 2.5E-05 5.5E-10 61.0 8.5 104 7-111 81-201 (492)
176 KOG1282 Serine carboxypeptidas 98.1 0.0014 3.1E-08 53.3 18.1 107 5-112 72-213 (454)
177 PF10142 PhoPQ_related: PhoPQ- 98.0 0.00028 6E-09 55.8 12.9 154 66-257 162-320 (367)
178 PLN02213 sinapoylglucose-malat 98.0 0.00047 1E-08 54.2 14.2 81 33-113 2-97 (319)
179 COG1073 Hydrolases of the alph 97.9 0.00013 2.8E-09 56.8 9.9 61 197-257 228-297 (299)
180 COG2272 PnbA Carboxylesterase 97.9 6.9E-05 1.5E-09 60.3 7.8 106 5-113 93-218 (491)
181 PF00135 COesterase: Carboxyle 97.8 8.4E-05 1.8E-09 63.1 8.4 106 5-112 124-245 (535)
182 KOG3101 Esterase D [General fu 97.8 3.2E-05 6.8E-10 54.9 3.6 110 3-113 41-177 (283)
183 KOG2182 Hydrolytic enzymes of 97.7 0.00056 1.2E-08 55.2 10.8 108 4-112 84-207 (514)
184 PF08386 Abhydrolase_4: TAP-li 97.7 0.00025 5.4E-09 45.6 6.7 60 200-259 34-96 (103)
185 KOG1202 Animal-type fatty acid 97.7 0.0051 1.1E-07 55.2 16.2 99 4-113 2121-2220(2376)
186 KOG3967 Uncharacterized conser 97.7 0.00086 1.9E-08 47.9 9.4 103 6-111 101-226 (297)
187 cd00741 Lipase Lipase. Lipase 97.6 0.00022 4.9E-09 49.6 6.6 57 56-112 7-67 (153)
188 PF07082 DUF1350: Protein of u 97.6 0.013 2.9E-07 43.4 14.8 79 21-110 35-123 (250)
189 COG4553 DepA Poly-beta-hydroxy 97.5 0.006 1.3E-07 46.0 12.9 101 7-113 104-210 (415)
190 COG0627 Predicted esterase [Ge 97.5 0.00067 1.4E-08 52.8 8.3 112 3-115 51-190 (316)
191 PF05576 Peptidase_S37: PS-10 97.5 0.00024 5.2E-09 56.0 5.5 106 3-111 60-168 (448)
192 PF01764 Lipase_3: Lipase (cla 97.5 0.00038 8.3E-09 47.6 5.8 23 75-97 63-85 (140)
193 COG2830 Uncharacterized protei 97.4 0.00098 2.1E-08 45.3 7.0 78 7-112 12-90 (214)
194 PLN02517 phosphatidylcholine-s 97.4 0.00082 1.8E-08 55.8 7.7 88 20-113 156-264 (642)
195 cd00519 Lipase_3 Lipase (class 97.3 0.0015 3.2E-08 48.9 8.0 57 55-111 106-167 (229)
196 PF11144 DUF2920: Protein of u 97.3 0.0038 8.2E-08 49.7 9.6 35 77-112 185-219 (403)
197 COG2819 Predicted hydrolase of 97.3 0.00065 1.4E-08 50.6 5.2 38 74-112 135-172 (264)
198 PF11187 DUF2974: Protein of u 97.2 0.0015 3.3E-08 48.3 6.6 48 65-112 73-123 (224)
199 COG3946 VirJ Type IV secretory 97.2 0.0032 6.9E-08 49.7 8.4 85 8-98 262-348 (456)
200 KOG1551 Uncharacterized conser 97.1 0.012 2.5E-07 43.9 10.2 55 203-258 309-367 (371)
201 KOG2369 Lecithin:cholesterol a 97.1 0.0015 3.2E-08 52.6 5.7 87 20-112 124-225 (473)
202 PF06259 Abhydrolase_8: Alpha/ 97.1 0.0028 6.1E-08 44.8 6.6 57 55-112 86-144 (177)
203 COG2382 Fes Enterochelin ester 97.0 0.0019 4E-08 49.0 5.8 110 3-113 95-213 (299)
204 PF01083 Cutinase: Cutinase; 97.0 0.0086 1.9E-07 42.8 8.8 101 8-112 7-122 (179)
205 COG2939 Carboxypeptidase C (ca 97.0 0.0047 1E-07 50.3 8.2 107 5-111 100-235 (498)
206 KOG2521 Uncharacterized conser 97.0 0.058 1.2E-06 42.6 13.6 238 5-259 37-292 (350)
207 COG1770 PtrB Protease II [Amin 96.9 0.052 1.1E-06 45.9 13.1 108 4-113 446-563 (682)
208 KOG2237 Predicted serine prote 96.7 0.012 2.5E-07 49.4 8.2 105 5-111 469-583 (712)
209 PLN02571 triacylglycerol lipas 96.6 0.004 8.7E-08 49.9 5.1 39 57-96 208-246 (413)
210 PLN02454 triacylglycerol lipas 96.5 0.0057 1.2E-07 49.0 5.3 39 58-96 207-248 (414)
211 KOG1516 Carboxylesterase and r 96.5 0.016 3.4E-07 49.5 8.4 103 6-111 112-231 (545)
212 PLN02310 triacylglycerol lipas 96.4 0.0078 1.7E-07 48.2 5.4 39 58-96 190-229 (405)
213 PLN02162 triacylglycerol lipas 96.4 0.0077 1.7E-07 48.9 5.2 21 75-95 277-297 (475)
214 PF11288 DUF3089: Protein of u 96.4 0.012 2.6E-07 42.7 5.6 67 29-97 42-116 (207)
215 PF05277 DUF726: Protein of un 96.3 0.032 7E-07 44.0 8.0 44 74-117 218-265 (345)
216 PLN00413 triacylglycerol lipas 96.2 0.011 2.4E-07 48.1 5.4 35 58-95 269-303 (479)
217 PLN02408 phospholipase A1 96.2 0.01 2.2E-07 47.0 5.1 36 61-97 186-221 (365)
218 PLN03037 lipase class 3 family 96.2 0.012 2.5E-07 48.5 5.3 39 58-96 299-338 (525)
219 PLN02324 triacylglycerol lipas 96.1 0.011 2.5E-07 47.4 5.0 36 60-96 200-235 (415)
220 COG1505 Serine proteases of th 96.0 0.028 6E-07 46.9 6.9 105 5-110 420-533 (648)
221 PLN02934 triacylglycerol lipas 96.0 0.014 3.1E-07 47.9 5.1 35 59-96 307-341 (515)
222 PLN02802 triacylglycerol lipas 95.9 0.016 3.5E-07 47.6 4.9 37 60-97 315-351 (509)
223 PLN02761 lipase class 3 family 95.7 0.023 5E-07 46.9 5.2 21 76-96 294-314 (527)
224 KOG4372 Predicted alpha/beta h 95.7 0.011 2.3E-07 47.0 3.2 86 5-93 79-167 (405)
225 PLN02753 triacylglycerol lipas 95.7 0.024 5.3E-07 46.8 5.2 21 76-96 312-332 (531)
226 PLN02719 triacylglycerol lipas 95.7 0.023 5E-07 46.8 5.0 21 76-96 298-318 (518)
227 PF07519 Tannase: Tannase and 95.4 0.17 3.8E-06 42.3 9.2 86 25-112 52-150 (474)
228 PLN02847 triacylglycerol lipas 95.3 0.04 8.7E-07 46.2 5.2 20 77-96 252-271 (633)
229 PF04083 Abhydro_lipase: Parti 95.2 0.018 4E-07 33.0 2.2 19 4-22 41-59 (63)
230 KOG1283 Serine carboxypeptidas 94.8 0.18 3.8E-06 39.0 7.1 107 5-111 30-165 (414)
231 KOG4569 Predicted lipase [Lipi 94.6 0.073 1.6E-06 42.3 5.0 37 57-96 155-191 (336)
232 COG4947 Uncharacterized protei 94.1 0.14 3E-06 35.7 4.8 105 2-112 22-136 (227)
233 PF08237 PE-PPE: PE-PPE domain 94.1 0.46 1E-05 35.4 7.9 65 32-97 2-69 (225)
234 PF06850 PHB_depo_C: PHB de-po 93.9 0.14 2.9E-06 36.6 4.4 57 200-256 134-201 (202)
235 COG4287 PqaA PhoPQ-activated p 93.3 1 2.2E-05 35.8 8.6 57 197-256 326-386 (507)
236 PRK12467 peptide synthase; Pro 92.5 0.78 1.7E-05 49.0 9.2 99 6-110 3692-3793(3956)
237 KOG2029 Uncharacterized conser 92.2 0.37 8E-06 40.6 5.3 56 56-111 506-571 (697)
238 KOG4540 Putative lipase essent 91.8 0.39 8.4E-06 36.5 4.6 23 76-98 276-298 (425)
239 COG5153 CVT17 Putative lipase 91.8 0.39 8.4E-06 36.5 4.6 23 76-98 276-298 (425)
240 KOG4388 Hormone-sensitive lipa 91.6 2.5 5.4E-05 35.9 9.3 102 6-111 396-507 (880)
241 KOG2385 Uncharacterized conser 90.8 6.5 0.00014 33.0 10.7 47 74-120 445-495 (633)
242 PF06309 Torsin: Torsin; Inte 85.3 6 0.00013 26.4 6.3 58 3-70 49-116 (127)
243 PF09949 DUF2183: Uncharacteri 85.1 7.7 0.00017 24.7 8.3 82 22-107 13-97 (100)
244 TIGR03712 acc_sec_asp2 accesso 83.8 5.4 0.00012 33.2 6.7 97 6-110 289-388 (511)
245 TIGR03131 malonate_mdcH malona 82.5 3.5 7.5E-05 32.3 5.2 22 74-95 74-95 (295)
246 COG1448 TyrB Aspartate/tyrosin 81.7 27 0.00058 28.4 13.3 86 7-111 172-264 (396)
247 PF05576 Peptidase_S37: PS-10 79.1 8.4 0.00018 31.5 6.1 59 197-255 348-412 (448)
248 PF12242 Eno-Rase_NADH_b: NAD( 78.0 9.7 0.00021 22.8 4.7 26 73-98 37-62 (78)
249 cd01714 ETF_beta The electron 77.0 21 0.00045 26.2 7.4 64 34-109 79-146 (202)
250 PRK10279 hypothetical protein; 74.9 4.6 0.0001 31.7 3.7 32 66-97 23-54 (300)
251 cd07225 Pat_PNPLA6_PNPLA7 Pata 74.0 4.7 0.0001 31.8 3.6 32 67-98 34-65 (306)
252 COG1576 Uncharacterized conser 74.0 16 0.00034 25.3 5.6 56 25-93 60-115 (155)
253 PF00698 Acyl_transf_1: Acyl t 73.8 2.8 6E-05 33.3 2.3 27 70-96 78-104 (318)
254 PF10081 Abhydrolase_9: Alpha/ 73.8 7.6 0.00016 29.9 4.4 56 58-114 91-149 (289)
255 cd07198 Patatin Patatin-like p 72.8 5.4 0.00012 28.3 3.4 25 74-98 24-48 (172)
256 smart00827 PKS_AT Acyl transfe 72.5 5.5 0.00012 31.2 3.7 22 74-95 80-101 (298)
257 cd07227 Pat_Fungal_NTE1 Fungal 72.0 6.4 0.00014 30.4 3.8 32 66-97 28-59 (269)
258 cd07207 Pat_ExoU_VipD_like Exo 71.7 7.5 0.00016 28.1 4.0 33 65-97 16-48 (194)
259 PF08484 Methyltransf_14: C-me 71.3 17 0.00036 25.6 5.4 54 55-110 49-102 (160)
260 cd07210 Pat_hypo_W_succinogene 71.0 7.1 0.00015 29.1 3.8 24 74-97 26-49 (221)
261 COG3933 Transcriptional antite 70.8 39 0.00084 28.1 7.9 78 5-96 108-185 (470)
262 COG1752 RssA Predicted esteras 70.8 6.3 0.00014 31.1 3.7 32 66-97 29-60 (306)
263 COG4822 CbiK Cobalamin biosynt 68.2 35 0.00077 25.2 6.5 60 5-81 137-199 (265)
264 PF09994 DUF2235: Uncharacteri 68.1 55 0.0012 25.5 9.3 90 6-97 1-113 (277)
265 TIGR00128 fabD malonyl CoA-acy 67.7 7.6 0.00016 30.2 3.6 22 75-96 82-103 (290)
266 cd07209 Pat_hypo_Ecoli_Z1214_l 66.0 9.2 0.0002 28.3 3.5 25 74-98 24-48 (215)
267 PF07519 Tannase: Tannase and 65.5 9.4 0.0002 32.3 3.8 61 199-259 352-429 (474)
268 cd07205 Pat_PNPLA6_PNPLA7_NTE1 64.7 14 0.0003 26.3 4.1 24 74-97 26-49 (175)
269 cd07230 Pat_TGL4-5_like Triacy 64.2 4.8 0.0001 33.3 1.9 34 65-98 90-123 (421)
270 PF11713 Peptidase_C80: Peptid 64.0 5.4 0.00012 27.9 1.8 51 38-88 59-116 (157)
271 COG3673 Uncharacterized conser 63.7 75 0.0016 25.4 9.5 89 6-96 31-142 (423)
272 PF05577 Peptidase_S28: Serine 63.7 9.5 0.00021 31.8 3.6 41 201-241 377-417 (434)
273 cd07228 Pat_NTE_like_bacteria 63.6 12 0.00027 26.6 3.7 25 74-98 26-50 (175)
274 PF03610 EIIA-man: PTS system 62.9 40 0.00086 22.0 8.2 74 8-95 2-77 (116)
275 cd03818 GT1_ExpC_like This fam 62.0 55 0.0012 26.8 7.7 37 9-47 2-39 (396)
276 PF02590 SPOUT_MTase: Predicte 60.5 19 0.00042 25.1 4.1 49 25-86 60-109 (155)
277 cd07232 Pat_PLPL Patain-like p 60.0 5.6 0.00012 32.8 1.6 40 65-105 84-123 (407)
278 COG0279 GmhA Phosphoheptose is 56.9 19 0.00042 25.3 3.5 73 10-88 44-121 (176)
279 COG0529 CysC Adenylylsulfate k 56.8 31 0.00067 24.8 4.5 59 5-66 21-84 (197)
280 TIGR02816 pfaB_fam PfaB family 56.5 16 0.00034 31.5 3.6 24 74-97 263-286 (538)
281 PRK00103 rRNA large subunit me 55.9 45 0.00098 23.4 5.2 47 27-86 62-109 (157)
282 cd07231 Pat_SDP1-like Sugar-De 53.8 23 0.0005 28.1 3.9 33 65-97 85-117 (323)
283 cd07208 Pat_hypo_Ecoli_yjju_li 53.6 22 0.00049 27.3 3.9 22 77-98 28-49 (266)
284 cd07229 Pat_TGL3_like Triacylg 52.7 23 0.0005 29.0 3.9 40 65-105 100-139 (391)
285 cd07224 Pat_like Patatin-like 52.3 25 0.00053 26.5 3.8 21 78-98 31-51 (233)
286 PLN02752 [acyl-carrier protein 51.7 33 0.00073 27.6 4.7 18 78-95 126-143 (343)
287 PF14253 AbiH: Bacteriophage a 51.5 18 0.00038 27.9 3.0 15 74-88 233-247 (270)
288 PF10605 3HBOH: 3HB-oligomer h 50.6 15 0.00032 31.8 2.5 34 78-111 287-320 (690)
289 PF06792 UPF0261: Uncharacteri 50.6 1.5E+02 0.0032 24.7 11.3 98 11-109 5-127 (403)
290 PF02633 Creatininase: Creatin 50.5 45 0.00098 25.2 5.0 72 24-96 44-121 (237)
291 cd07206 Pat_TGL3-4-5_SDP1 Tria 50.2 27 0.00059 27.4 3.8 25 74-98 95-119 (298)
292 COG2939 Carboxypeptidase C (ca 49.4 34 0.00073 28.9 4.3 29 228-257 463-491 (498)
293 PRK02399 hypothetical protein; 48.7 1.6E+02 0.0034 24.5 11.3 99 10-109 6-129 (406)
294 PF03283 PAE: Pectinacetyleste 48.6 74 0.0016 26.0 6.1 36 74-110 154-193 (361)
295 COG0218 Predicted GTPase [Gene 47.0 17 0.00037 26.5 2.1 22 197-218 132-153 (200)
296 PF14606 Lipase_GDSL_3: GDSL-l 46.5 49 0.0011 23.8 4.3 20 54-73 71-90 (178)
297 PF00326 Peptidase_S9: Prolyl 46.4 57 0.0012 23.9 5.0 61 5-70 143-209 (213)
298 cd01819 Patatin_and_cPLA2 Pata 46.1 36 0.00078 23.7 3.6 19 76-94 28-46 (155)
299 COG0331 FabD (acyl-carrier-pro 46.1 41 0.00088 26.7 4.2 21 75-95 84-104 (310)
300 TIGR00521 coaBC_dfp phosphopan 45.9 1.7E+02 0.0038 24.2 8.7 75 7-83 113-193 (390)
301 KOG4389 Acetylcholinesterase/B 45.9 34 0.00075 28.9 3.8 51 60-111 203-254 (601)
302 cd07204 Pat_PNPLA_like Patatin 44.3 39 0.00085 25.7 3.8 19 79-97 34-52 (243)
303 PF01734 Patatin: Patatin-like 43.3 35 0.00075 24.2 3.4 22 76-97 27-48 (204)
304 COG2236 Predicted phosphoribos 42.7 56 0.0012 23.8 4.2 45 53-97 6-50 (192)
305 COG3887 Predicted signaling pr 42.6 1E+02 0.0022 27.0 6.1 102 5-111 257-377 (655)
306 KOG1752 Glutaredoxin and relat 40.9 66 0.0014 20.7 3.9 77 5-97 13-90 (104)
307 cd07212 Pat_PNPLA9 Patatin-lik 40.4 27 0.00058 27.7 2.5 19 79-97 35-53 (312)
308 COG3007 Uncharacterized paraqu 40.0 84 0.0018 24.7 4.8 25 74-98 40-64 (398)
309 COG3340 PepE Peptidase E [Amin 39.1 1.6E+02 0.0035 22.0 5.9 36 5-40 31-70 (224)
310 COG1506 DAP2 Dipeptidyl aminop 38.5 1.5E+02 0.0033 26.3 7.0 43 5-47 550-598 (620)
311 COG3946 VirJ Type IV secretory 38.4 1.8E+02 0.0038 24.3 6.6 80 29-111 72-156 (456)
312 KOG2214 Predicted esterase of 38.4 13 0.00029 31.2 0.6 39 66-105 192-230 (543)
313 cd07220 Pat_PNPLA2 Patatin-lik 38.4 52 0.0011 25.2 3.7 21 78-98 38-58 (249)
314 PLN02748 tRNA dimethylallyltra 38.2 2.2E+02 0.0049 24.3 7.5 76 6-84 21-120 (468)
315 cd07218 Pat_iPLA2 Calcium-inde 38.1 51 0.0011 25.1 3.6 20 79-98 33-52 (245)
316 TIGR00246 tRNA_RlmH_YbeA rRNA 38.0 1.3E+02 0.0029 21.0 5.3 43 32-87 65-107 (153)
317 cd07221 Pat_PNPLA3 Patatin-lik 37.9 49 0.0011 25.3 3.5 21 78-98 34-54 (252)
318 COG2240 PdxK Pyridoxal/pyridox 37.8 1.8E+02 0.004 22.8 6.4 76 35-115 37-116 (281)
319 PRK05282 (alpha)-aspartyl dipe 37.8 1.8E+02 0.0039 22.1 7.7 37 5-41 30-70 (233)
320 PF12780 AAA_8: P-loop contain 37.6 1.9E+02 0.0042 22.4 6.9 62 12-84 36-98 (268)
321 PLN02840 tRNA dimethylallyltra 37.3 2.2E+02 0.0047 24.0 7.2 76 6-84 20-119 (421)
322 cd07222 Pat_PNPLA4 Patatin-lik 36.9 54 0.0012 25.0 3.6 17 79-95 34-50 (246)
323 PF01583 APS_kinase: Adenylyls 34.8 85 0.0019 22.0 4.0 35 6-40 1-38 (156)
324 PHA02114 hypothetical protein 34.5 71 0.0015 20.1 3.1 32 8-39 84-116 (127)
325 COG5389 Uncharacterized protei 34.0 1E+02 0.0023 21.4 4.1 68 187-259 53-120 (181)
326 PRK14457 ribosomal RNA large s 33.8 1.9E+02 0.0041 23.5 6.3 72 9-91 260-334 (345)
327 PF14606 Lipase_GDSL_3: GDSL-l 33.6 1.8E+02 0.004 20.9 7.2 75 7-81 61-142 (178)
328 PRK14046 malate--CoA ligase su 33.3 85 0.0019 26.0 4.4 31 76-107 119-149 (392)
329 PRK05579 bifunctional phosphop 33.3 2.9E+02 0.0062 23.1 8.4 71 7-83 117-196 (399)
330 COG2230 Cfa Cyclopropane fatty 33.0 1.3E+02 0.0029 23.5 5.1 49 57-107 55-103 (283)
331 PF13207 AAA_17: AAA domain; P 32.3 1.4E+02 0.0031 19.2 5.6 72 9-82 1-77 (121)
332 PRK00091 miaA tRNA delta(2)-is 31.4 2.3E+02 0.005 22.6 6.3 73 6-81 3-99 (307)
333 cd00883 beta_CA_cladeA Carboni 31.3 69 0.0015 23.1 3.2 30 61-93 69-98 (182)
334 cd07213 Pat17_PNPLA8_PNPLA9_li 31.1 86 0.0019 24.5 4.0 19 79-97 37-55 (288)
335 PRK06731 flhF flagellar biosyn 31.0 2.6E+02 0.0056 21.8 9.3 65 32-108 154-219 (270)
336 PLN03006 carbonate dehydratase 29.4 76 0.0016 25.0 3.3 31 60-93 159-189 (301)
337 PF04084 ORC2: Origin recognit 29.4 1.4E+02 0.003 24.0 4.9 77 10-89 57-150 (326)
338 COG0084 TatD Mg-dependent DNas 29.2 1.3E+02 0.0029 23.2 4.5 54 57-112 13-67 (256)
339 cd07211 Pat_PNPLA8 Patatin-lik 28.6 51 0.0011 26.1 2.4 17 79-95 44-60 (308)
340 KOG2183 Prolylcarboxypeptidase 27.8 1.5E+02 0.0033 24.7 4.7 57 202-258 417-485 (492)
341 TIGR03709 PPK2_rel_1 polyphosp 27.7 1E+02 0.0022 23.9 3.7 69 5-88 54-126 (264)
342 PF00731 AIRC: AIR carboxylase 27.5 1.6E+02 0.0035 20.5 4.3 83 7-105 1-84 (150)
343 PRK03363 fixB putative electro 27.2 3.3E+02 0.0071 21.8 6.7 63 34-108 51-114 (313)
344 TIGR03707 PPK2_P_aer polyphosp 26.8 1.1E+02 0.0024 23.1 3.7 70 5-89 29-102 (230)
345 cd07217 Pat17_PNPLA8_PNPLA9_li 26.6 63 0.0014 26.1 2.6 18 79-96 44-61 (344)
346 cd08663 DAP_dppA_1 Peptidase M 26.1 2.4E+02 0.0052 22.0 5.4 58 197-257 144-203 (266)
347 cd08770 DAP_dppA_3 Peptidase M 26.1 1.9E+02 0.004 22.5 4.8 58 197-257 144-202 (263)
348 COG4425 Predicted membrane pro 26.1 74 0.0016 26.7 2.8 37 56-92 377-413 (588)
349 PRK07877 hypothetical protein; 25.9 1.9E+02 0.0041 26.3 5.5 35 74-111 106-140 (722)
350 COG1092 Predicted SAM-dependen 25.8 2.4E+02 0.0053 23.4 5.7 18 32-49 290-307 (393)
351 PRK04148 hypothetical protein; 25.8 1.4E+02 0.0029 20.4 3.6 21 76-96 18-38 (134)
352 PF04422 FrhB_FdhB_N: Coenzyme 25.7 1.1E+02 0.0024 18.5 3.0 32 79-110 13-44 (82)
353 cd00382 beta_CA Carbonic anhyd 25.7 1.2E+02 0.0025 20.1 3.3 29 60-91 46-74 (119)
354 PF10686 DUF2493: Protein of u 25.6 87 0.0019 18.5 2.4 10 7-16 32-41 (71)
355 cd08769 DAP_dppA_2 Peptidase M 25.6 2E+02 0.0044 22.4 4.9 57 197-256 144-202 (270)
356 PF13478 XdhC_C: XdhC Rossmann 25.5 1.4E+02 0.0031 20.3 3.8 29 11-42 2-31 (136)
357 PF03681 UPF0150: Uncharacteri 25.4 94 0.002 16.3 2.4 32 32-69 13-44 (48)
358 PRK06193 hypothetical protein; 25.4 1.3E+02 0.0027 22.4 3.7 53 54-111 135-187 (206)
359 COG3621 Patatin [General funct 25.4 2.6E+02 0.0056 22.6 5.4 57 29-97 5-63 (394)
360 PLN00416 carbonate dehydratase 25.3 1.1E+02 0.0024 23.6 3.5 31 61-94 128-158 (258)
361 PF15566 Imm18: Immunity prote 24.6 94 0.002 17.1 2.2 31 56-89 4-34 (52)
362 PRK13512 coenzyme A disulfide 24.6 3.1E+02 0.0067 23.1 6.4 34 74-111 147-180 (438)
363 PF06289 FlbD: Flagellar prote 24.4 1.5E+02 0.0032 16.9 3.3 33 224-257 26-58 (60)
364 PRK14974 cell division protein 24.4 3.9E+02 0.0084 21.7 8.3 65 32-108 222-287 (336)
365 KOG1283 Serine carboxypeptidas 24.3 46 0.001 26.5 1.4 30 224-253 381-410 (414)
366 PRK13938 phosphoheptose isomer 24.2 2.9E+02 0.0064 20.2 5.4 22 76-97 46-67 (196)
367 PF03976 PPK2: Polyphosphate k 24.2 59 0.0013 24.5 1.9 68 6-88 30-101 (228)
368 PF00484 Pro_CA: Carbonic anhy 24.1 1.8E+02 0.004 20.0 4.3 32 60-94 42-73 (153)
369 PTZ00445 p36-lilke protein; Pr 24.0 2.8E+02 0.0061 20.8 5.2 64 22-86 31-102 (219)
370 cd00281 DAP_dppA Peptidase M55 24.0 2.5E+02 0.0054 21.9 5.1 57 197-256 143-201 (265)
371 PF00004 AAA: ATPase family as 24.0 2.1E+02 0.0046 18.5 5.4 32 10-43 1-34 (132)
372 PLN03019 carbonic anhydrase 23.8 1.6E+02 0.0034 23.7 4.1 31 60-93 202-232 (330)
373 KOG2170 ATPase of the AAA+ sup 23.8 68 0.0015 25.4 2.1 20 3-22 106-125 (344)
374 KOG1411 Aspartate aminotransfe 23.7 3.9E+02 0.0083 21.9 6.1 85 8-110 199-290 (427)
375 PF00448 SRP54: SRP54-type pro 23.6 3E+02 0.0065 20.1 8.0 66 31-108 82-148 (196)
376 PF01872 RibD_C: RibD C-termin 23.6 2.9E+02 0.0063 20.0 5.9 42 62-109 122-163 (200)
377 PF01118 Semialdhyde_dh: Semia 23.4 1.5E+02 0.0033 19.4 3.6 32 77-110 1-33 (121)
378 cd07219 Pat_PNPLA1 Patatin-lik 23.1 1.3E+02 0.0029 24.7 3.7 18 79-96 47-64 (382)
379 PF03490 Varsurf_PPLC: Variant 23.1 1.1E+02 0.0024 16.5 2.2 27 187-213 10-36 (51)
380 cd00842 MPP_ASMase acid sphing 22.9 2.8E+02 0.006 21.7 5.6 28 55-83 194-221 (296)
381 KOG0781 Signal recognition par 22.9 5E+02 0.011 22.5 6.9 65 31-108 465-538 (587)
382 PF03575 Peptidase_S51: Peptid 22.9 84 0.0018 21.8 2.4 13 78-90 70-82 (154)
383 COG0288 CynT Carbonic anhydras 22.7 1E+02 0.0022 22.9 2.8 36 57-95 76-111 (207)
384 PF08257 Sulfakinin: Sulfakini 22.4 42 0.00091 10.8 0.4 6 232-237 2-7 (9)
385 PF02353 CMAS: Mycolic acid cy 22.4 1.2E+02 0.0026 23.6 3.3 51 55-107 42-93 (273)
386 cd05007 SIS_Etherase N-acetylm 22.3 3.4E+02 0.0073 20.9 5.7 39 58-98 34-72 (257)
387 cd00884 beta_CA_cladeB Carboni 22.2 1.5E+02 0.0032 21.6 3.6 32 60-94 74-105 (190)
388 TIGR03607 patatin-related prot 22.0 1.7E+02 0.0036 26.7 4.4 21 75-95 65-85 (739)
389 TIGR02813 omega_3_PfaA polyket 22.0 1E+02 0.0022 32.8 3.4 21 74-94 672-692 (2582)
390 cd01012 YcaC_related YcaC rela 22.0 2.8E+02 0.0061 19.2 8.4 50 62-115 78-127 (157)
391 PF00857 Isochorismatase: Isoc 21.9 2.9E+02 0.0062 19.3 5.7 50 62-115 102-151 (174)
392 PF07279 DUF1442: Protein of u 21.8 2.2E+02 0.0048 21.3 4.3 46 62-110 28-77 (218)
393 COG0324 MiaA tRNA delta(2)-iso 21.8 4.2E+02 0.0092 21.2 8.4 76 6-84 2-101 (308)
394 cd07037 TPP_PYR_MenD Pyrimidin 21.7 1.3E+02 0.0028 21.2 3.1 34 5-38 59-92 (162)
395 COG0626 MetC Cystathionine bet 21.6 1.2E+02 0.0026 25.2 3.3 62 25-92 275-346 (396)
396 PLN03014 carbonic anhydrase 21.6 2E+02 0.0044 23.3 4.3 31 60-93 207-237 (347)
397 cd01406 SIR2-like Sir2-like: P 21.4 1.9E+02 0.004 21.9 4.2 65 43-109 143-217 (242)
398 PF02972 Phycoerythr_ab: Phyco 21.3 80 0.0017 17.5 1.5 12 35-46 5-16 (57)
399 KOG2316 Predicted ATPase (PP-l 21.3 1.7E+02 0.0036 22.0 3.5 63 26-91 56-119 (277)
400 KOG2182 Hydrolytic enzymes of 21.0 81 0.0018 26.8 2.2 59 200-258 433-503 (514)
401 cd07216 Pat17_PNPLA8_PNPLA9_li 20.9 72 0.0016 25.3 1.9 17 79-95 45-61 (309)
402 TIGR01279 DPOR_bchN light-inde 20.8 3.2E+02 0.0069 22.8 5.6 77 6-87 84-165 (407)
403 cd07199 Pat17_PNPLA8_PNPLA9_li 20.7 86 0.0019 24.0 2.3 18 79-96 37-54 (258)
404 PHA00350 putative assembly pro 20.6 1.9E+02 0.0041 24.1 4.2 35 8-43 2-40 (399)
405 COG0796 MurI Glutamate racemas 20.2 3.7E+02 0.0081 21.0 5.4 57 200-256 5-62 (269)
406 PLN02154 carbonic anhydrase 20.1 1.8E+02 0.0038 22.9 3.7 31 61-94 154-184 (290)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.8e-38 Score=243.65 Aligned_cols=243 Identities=17% Similarity=0.192 Sum_probs=157.6
Q ss_pred CCCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCC------CCCcHHHHHHHHHHHHHHHhcCCCC
Q 023794 3 GTEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSEND------IDLSIETMCNDVLAVLKEMYGEQPP 76 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~------~~~~~~~~~~d~~~~l~~l~~~~~~ 76 (277)
|+++|+|||+||++++...|..+++.|++.|+|+++|+||||.|+.+.. ..++++++++|+.++++++ +.+
T Consensus 26 G~~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l---~~~ 102 (294)
T PLN02824 26 GTSGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV---VGD 102 (294)
T ss_pred CCCCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh---cCC
Confidence 5457899999999999999999999999999999999999999986532 2589999999999999999 567
Q ss_pred cEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcc----h-HHhHHHHHHHHhhccchhhHHHH---------HHH
Q 023794 77 SIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTA----M-ASLIHMQKILSTRMQHFSSIEKA---------IEW 142 (277)
Q Consensus 77 ~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 142 (277)
+++|+||||||++++.+|.++| ++|+++|++++..... . .........+............. ...
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p-~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAP-ELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKN 181 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhCh-hheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHH
Confidence 8999999999999999999999 9999999999754211 0 00000000000000000000000 000
Q ss_pred hhcCCcc--ccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHH-HHHhhhhhhhcCCCccEEEEEeCCCCCCchhhh
Q 023794 143 SVKGGSL--RNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWR-AWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTI 219 (277)
Q Consensus 143 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 219 (277)
.+..... ......... ......... ........... .........+.++++|+|+|+|++|.+++.+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 253 (294)
T PLN02824 182 ILCQCYHDDSAVTDELVE---AILRPGLEP-----GAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELG 253 (294)
T ss_pred HHHHhccChhhccHHHHH---HHHhccCCc-----hHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHH
Confidence 0000000 000000000 000000000 00000000000 000112345688999999999999998877654
Q ss_pred h---hhcCCccEEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 220 G---QMQGKFQMVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 220 ~---~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
. +..+++++++++++||++++|+|++|++.|.+|++++
T Consensus 254 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 254 RAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred HHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 4 3457789999999999999999999999999999763
No 2
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=100.00 E-value=1.6e-37 Score=222.13 Aligned_cols=255 Identities=59% Similarity=0.983 Sum_probs=233.4
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
.+|.++++||+|.+.-.|..++..|.. ..+|+++|+||||+|...+....+.+.++.|+.++++.+.+..+.+++|||
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVG 152 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVG 152 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEe
Confidence 789999999999999999999999976 688899999999999888777899999999999999999988788999999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccc
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPST 162 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (277)
|||||.||.+.|...-...+.+++.++..-+..+.....+..++..+...|...+.++.|.++.+..++........+..
T Consensus 153 HSmGGaIav~~a~~k~lpsl~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~SArVsmP~~ 232 (343)
T KOG2564|consen 153 HSMGGAIAVHTAASKTLPSLAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNRDSARVSMPSQ 232 (343)
T ss_pred ccccchhhhhhhhhhhchhhhceEEEEEechHHHHHHHHHHHHHhcCCccccchhhHHHHHhccccccccccceEecchh
Confidence 99999999988876421249999999998888888888999999999999999999999999999999999999999988
Q ss_pred cccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCCCCcccccC
Q 023794 163 LKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHTGHAIQEDA 242 (277)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 242 (277)
+.+......+.++..+.....||..|+..+...+..+++|-++|..+.|.+.....+.++....++.+++.+||+.+.+.
T Consensus 233 ~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdLtiGQMQGk~Q~~vL~~~GH~v~ED~ 312 (343)
T KOG2564|consen 233 LKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDLTIGQMQGKFQLQVLPLCGHFVHEDS 312 (343)
T ss_pred eeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccCcceeeeeeccceeeeeecccCceeccCC
Confidence 88877656788899999999999999999999999999999999999999888778888888889999999999999999
Q ss_pred hHHHHHHHHHHHHhcCC
Q 023794 243 PEEFASLILNFIARNRI 259 (277)
Q Consensus 243 p~~~~~~i~~fl~~~~~ 259 (277)
|..++..+..|+.++.-
T Consensus 313 P~kva~~~~~f~~Rn~~ 329 (343)
T KOG2564|consen 313 PHKVAECLCVFWIRNRF 329 (343)
T ss_pred cchHHHHHHHHHhhhcc
Confidence 99999999999988763
No 3
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.8e-37 Score=242.20 Aligned_cols=246 Identities=19% Similarity=0.257 Sum_probs=156.1
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
+|+|||+||++++...|..+++.|.++|+|+++|+||||.|+.+.+..++++++++++.++++.+ +.++++|+||||
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l---~~~~~~lvGhS~ 164 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV---VQKPTVLIGNSV 164 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh---cCCCeEEEEECH
Confidence 58999999999999999999999998999999999999999876545789999999999999998 667899999999
Q ss_pred hHHHHHHHHHH-hcccccceEEEEccCCCcchHHh-HH-HHH-------HHHhhccchhhHHHHHHHhhcCCccccchhh
Q 023794 86 GGSVAVHVAAK-KTLRSLHGLVVVDVVEGTAMASL-IH-MQK-------ILSTRMQHFSSIEKAIEWSVKGGSLRNLDSA 155 (277)
Q Consensus 86 Gg~ia~~~a~~-~p~~~v~~lvl~~~~~~~~~~~~-~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
||.+++.++.. +| ++|+++|++++......... .. ... .+.............................
T Consensus 165 Gg~ia~~~a~~~~P-~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (360)
T PLN02679 165 GSLACVIAASESTR-DLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLS 243 (360)
T ss_pred HHHHHHHHHHhcCh-hhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHH
Confidence 99999999875 68 99999999998643211100 00 000 0000000000000000000000000000000
Q ss_pred hhcCccccccCCCcchhHHHHH------hHHHHHHHHH-HHhhhhhhhcCCCccEEEEEeCCCCCCchhh--------hh
Q 023794 156 RLSIPSTLKYDDSKKCYVYRAR------LEETEQYWRA-WYEGLSEKFLSCPVPKLLLLAGTDRLDRPLT--------IG 220 (277)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~--------~~ 220 (277)
........ . ......+... .......... ...+....+.++++|+|+|+|++|++++... +.
T Consensus 244 ~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~ 320 (360)
T PLN02679 244 VYGNKEAV--D-DELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLP 320 (360)
T ss_pred hccCcccC--C-HHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhh
Confidence 00000000 0 0000000000 0000000000 0012234567899999999999999887652 33
Q ss_pred hhcCCccEEEeCCCCCcccccChHHHHHHHHHHHHhcC
Q 023794 221 QMQGKFQMVVVRHTGHAIQEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 221 ~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 258 (277)
+..+++++++++++||++++|+|++|++.|.+||++..
T Consensus 321 ~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 321 SQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred ccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 34688999999999999999999999999999998743
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.2e-36 Score=235.97 Aligned_cols=248 Identities=21% Similarity=0.264 Sum_probs=159.1
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
++++|||+||++++...|+.+++.|.+.++|+++|+||||.|+.+.. .++++++++|+.++++++ +.++++++|||
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~-~~~~~~~a~dl~~ll~~l---~~~~~~lvGhS 101 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDI-DYTFADHARYLDAWFDAL---GLDDVVLVGHD 101 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh---CCCCeEEEEEC
Confidence 67899999999999999999999999888999999999999987653 689999999999999999 66789999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcch-HHh-HHHHHHHHhhccch--h----hHHHHHHHhhcCCccccchhhh
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAM-ASL-IHMQKILSTRMQHF--S----SIEKAIEWSVKGGSLRNLDSAR 156 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~-~~~-~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~ 156 (277)
|||.+|+.+|.++| ++|+++|++++...... ... .............. . .................+....
T Consensus 102 ~Gg~ia~~~a~~~p-~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (295)
T PRK03592 102 WGSALGFDWAARHP-DRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEE 180 (295)
T ss_pred HHHHHHHHHHHhCh-hheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHH
Confidence 99999999999999 99999999997432211 000 00000010000000 0 0000000000000000000000
Q ss_pred hc-CccccccCCCcchhHHHHHhHH-----HHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhh----hhhcCCc
Q 023794 157 LS-IPSTLKYDDSKKCYVYRARLEE-----TEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTI----GQMQGKF 226 (277)
Q Consensus 157 ~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~----~~~~~~~ 226 (277)
.. .... +............... ..........+....+.++++|+|+|+|++|.++++... .+..+++
T Consensus 181 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 258 (295)
T PRK03592 181 MAVYRRP--FPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQL 258 (295)
T ss_pred HHHHHhh--cCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhc
Confidence 00 0000 0000000000000000 000000111223445678999999999999998844322 3345788
Q ss_pred cEEEeCCCCCcccccChHHHHHHHHHHHHhcCC
Q 023794 227 QMVVVRHTGHAIQEDAPEEFASLILNFIARNRI 259 (277)
Q Consensus 227 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 259 (277)
++++++++||+++.|+|+++++.|.+|+++..+
T Consensus 259 ~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 259 EITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred ceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999998765
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=9.4e-37 Score=234.24 Aligned_cols=238 Identities=16% Similarity=0.181 Sum_probs=157.7
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
++++|||+||++++...|..+.+.|.++|+|+++|+||||.|+.+. ..++++++++|+.++++++ +.++++|+|||
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i~~l---~~~~~~LvG~S 99 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARMLDYL---DYGQVNAIGVS 99 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHHHHh---CcCceEEEEEC
Confidence 4589999999999999999999999989999999999999998654 3689999999999999999 66789999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcch-HHhHHHHHHHHhhccchhhHH---HHHHHhhcCCccccchhhhhcCc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAM-ASLIHMQKILSTRMQHFSSIE---KAIEWSVKGGSLRNLDSARLSIP 160 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 160 (277)
|||.+++.+|.++| ++|+++|++++...... ............ ...+.... .......... ............
T Consensus 100 ~GG~va~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 176 (276)
T TIGR02240 100 WGGALAQQFAHDYP-ERCKKLILAATAAGAVMVPGKPKVLMMMAS-PRRYIQPSHGIHIAPDIYGGA-FRRDPELAMAHA 176 (276)
T ss_pred HHHHHHHHHHHHCH-HHhhheEEeccCCccccCCCchhHHHHhcC-chhhhccccccchhhhhccce-eeccchhhhhhh
Confidence 99999999999999 99999999998754211 000000000000 00000000 0000000000 000000000000
Q ss_pred cccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhh---hhcCCccEEEeCCCCCc
Q 023794 161 STLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIG---QMQGKFQMVVVRHTGHA 237 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~---~~~~~~~~~~~~~~gH~ 237 (277)
.... ..... .... ........+....+.++++|+|+|+|++|++++.+... +..++++++++++ ||+
T Consensus 177 ~~~~-~~~~~-~~~~-------~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~ 246 (276)
T TIGR02240 177 SKVR-SGGKL-GYYW-------QLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHL 246 (276)
T ss_pred hhcc-cCCCc-hHHH-------HHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCc
Confidence 0000 00000 0000 00000011123446889999999999999998876544 4558899999975 999
Q ss_pred ccccChHHHHHHHHHHHHhcCC
Q 023794 238 IQEDAPEEFASLILNFIARNRI 259 (277)
Q Consensus 238 ~~~e~p~~~~~~i~~fl~~~~~ 259 (277)
++.|+|+++++.|.+|+++...
T Consensus 247 ~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 247 FLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred hhhccHHHHHHHHHHHHHHhhh
Confidence 9999999999999999998765
No 6
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=6.1e-37 Score=232.50 Aligned_cols=239 Identities=16% Similarity=0.241 Sum_probs=151.5
Q ss_pred eEEEEccCCCCcccHHHHHHhhh-hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCC-CcEEEEEeCh
Q 023794 8 VIFCLHGGGYSGLSFALAAGKIK-EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQP-PSIVLVGHSM 85 (277)
Q Consensus 8 ~vv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~lvG~S~ 85 (277)
+|||+||++.+...|+.+++.|. .+|+|+++|+||||.|+.+....++++++++|+.++++.+ +. ++++|+||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL---PPDHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc---CCCCCEEEEecCc
Confidence 59999999999999999999994 5899999999999999865544689999999999999998 44 4899999999
Q ss_pred hHHHHHHHHHHhcccccceEEEEccCCCcch-HHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhc--Cccc
Q 023794 86 GGSVAVHVAAKKTLRSLHGLVVVDVVEGTAM-ASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLS--IPST 162 (277)
Q Consensus 86 Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 162 (277)
||.+++.+|.++| ++|+++|++++...... .............. ..................... ....
T Consensus 82 GG~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PLN02965 82 GGGSVTEALCKFT-DKISMAIYVAAAMVKPGSIISPRLKNVMEGTE-------KIWDYTFGEGPDKPPTGIMMKPEFVRH 153 (255)
T ss_pred chHHHHHHHHhCc-hheeEEEEEccccCCCCCCccHHHHhhhhccc-------cceeeeeccCCCCCcchhhcCHHHHHH
Confidence 9999999999999 99999999998632110 00000000000000 000000000000000000000 0000
Q ss_pred cccCCCc-chhHHH-HHhH-HHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhh---hhcCCccEEEeCCCCC
Q 023794 163 LKYDDSK-KCYVYR-ARLE-ETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIG---QMQGKFQMVVVRHTGH 236 (277)
Q Consensus 163 ~~~~~~~-~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~---~~~~~~~~~~~~~~gH 236 (277)
..+.... ...... .... .....+.. ..++...+..+++|+++|+|++|..+++...+ +..+++++++++++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH 232 (255)
T PLN02965 154 YYYNQSPLEDYTLSSKLLRPAPVRAFQD-LDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDH 232 (255)
T ss_pred HHhcCCCHHHHHHHHHhcCCCCCcchhh-hhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCC
Confidence 0000000 000000 0000 00000000 01122234578999999999999998876544 4557889999999999
Q ss_pred cccccChHHHHHHHHHHHHhcC
Q 023794 237 AIQEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 237 ~~~~e~p~~~~~~i~~fl~~~~ 258 (277)
++++|+|++|++.|.+|+++..
T Consensus 233 ~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 233 SAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred chhhcCHHHHHHHHHHHHHHhc
Confidence 9999999999999999998753
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1e-35 Score=231.30 Aligned_cols=246 Identities=19% Similarity=0.231 Sum_probs=154.1
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCC-CCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSEND-IDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+.. ..++++++++|+.++++++ +.++++++|
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l---~~~~v~lvG 121 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL---DLTDVTLVC 121 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 478999999999999999999999985 89999999999999987543 3589999999999999998 667899999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchH-HhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhh-hhcCc
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMA-SLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSA-RLSIP 160 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 160 (277)
|||||.+|+.+|..+| ++|+++|++++....... ....... +.......... ................. .....
T Consensus 122 hS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 197 (302)
T PRK00870 122 QDWGGLIGLRLAAEHP-DRFARLVVANTGLPTGDGPMPDAFWA-WRAFSQYSPVL--PVGRLVNGGTVRDLSDAVRAAYD 197 (302)
T ss_pred EChHHHHHHHHHHhCh-hheeEEEEeCCCCCCccccchHHHhh-hhcccccCchh--hHHHHhhccccccCCHHHHHHhh
Confidence 9999999999999999 999999999874322110 0000100 00000000000 00000000000000000 00000
Q ss_pred cccccCC-CcchhHHHHHhHHH-HHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhh--hhhhcCCcc---EEEeCC
Q 023794 161 STLKYDD-SKKCYVYRARLEET-EQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLT--IGQMQGKFQ---MVVVRH 233 (277)
Q Consensus 161 ~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~--~~~~~~~~~---~~~~~~ 233 (277)
....... .............. ..............+.++++|+++|+|++|++++... +.+..++.+ ++++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~i~~ 277 (302)
T PRK00870 198 APFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGDAILQKRIPGAAGQPHPTIKG 277 (302)
T ss_pred cccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCchHHHHhhcccccccceeeecC
Confidence 0000000 00000000000000 0000000011223457899999999999999877543 444456665 889999
Q ss_pred CCCcccccChHHHHHHHHHHHHhc
Q 023794 234 TGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 234 ~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
+||++++|+|++|++.|.+|++++
T Consensus 278 ~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 278 AGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred CCccchhhChHHHHHHHHHHHhcC
Confidence 999999999999999999999764
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=3.8e-35 Score=223.12 Aligned_cols=237 Identities=19% Similarity=0.236 Sum_probs=150.4
Q ss_pred CCCCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Q 023794 2 AGTEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 2 ~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lv 81 (277)
.|.+.|+|||+||++++...|..+.+.|.++|+|+++|+||||.|+... .++++++++++.+ + ..++++++
T Consensus 9 ~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~---~~~~~~lv 79 (256)
T PRK10349 9 KGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----Q---APDKAIWL 79 (256)
T ss_pred cCCCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----c---CCCCeEEE
Confidence 3544457999999999999999999999999999999999999998643 4788887777653 3 35689999
Q ss_pred EeChhHHHHHHHHHHhcccccceEEEEccCCCcchH----H-hHHHHHHHHh-hccchhh-HHHHHHHhhcCCccccchh
Q 023794 82 GHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMA----S-LIHMQKILST-RMQHFSS-IEKAIEWSVKGGSLRNLDS 154 (277)
Q Consensus 82 G~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~----~-~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 154 (277)
||||||.+|+.+|..+| ++|+++|++++.+..... . .......+.. ....+.. ............. ....
T Consensus 80 GhS~Gg~ia~~~a~~~p-~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 156 (256)
T PRK10349 80 GWSLGGLVASQIALTHP-ERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTE--TARQ 156 (256)
T ss_pred EECHHHHHHHHHHHhCh-HhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCc--hHHH
Confidence 99999999999999999 999999999885432110 0 0000000000 0000000 0011000000000 0000
Q ss_pred hhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhh---hhhhcCCccEEEe
Q 023794 155 ARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLT---IGQMQGKFQMVVV 231 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~---~~~~~~~~~~~~~ 231 (277)
.................. ........+. ..+....+.++++|+|+|+|++|.+++.+. +.+..++++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i 230 (256)
T PRK10349 157 DARALKKTVLALPMPEVD----VLNGGLEILK--TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIF 230 (256)
T ss_pred HHHHHHHHhhccCCCcHH----HHHHHHHHHH--hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEe
Confidence 000000000000000000 0000001111 124556678999999999999999887764 4556689999999
Q ss_pred CCCCCcccccChHHHHHHHHHHHHh
Q 023794 232 RHTGHAIQEDAPEEFASLILNFIAR 256 (277)
Q Consensus 232 ~~~gH~~~~e~p~~~~~~i~~fl~~ 256 (277)
+++||++++|+|++|++.|.+|-++
T Consensus 231 ~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 231 AKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCCCCccccCHHHHHHHHHHHhcc
Confidence 9999999999999999999999654
No 9
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=8.8e-36 Score=220.40 Aligned_cols=246 Identities=22% Similarity=0.278 Sum_probs=165.1
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCC-CCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSEND-IDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
++|.|+++||++.+..+|+.+...|+. +|+|+++|+||+|.|+.++. ..|++..++.|+..+|++| +.++++++|
T Consensus 43 ~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L---g~~k~~lvg 119 (322)
T KOG4178|consen 43 DGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL---GLKKAFLVG 119 (322)
T ss_pred CCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh---ccceeEEEe
Confidence 789999999999999999999999988 69999999999999999886 6899999999999999999 788999999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHH-hHHHHHHHHhhc--cchh---h---------HHHHHHHhhcCC
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMAS-LIHMQKILSTRM--QHFS---S---------IEKAIEWSVKGG 147 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~--~~~~---~---------~~~~~~~~~~~~ 147 (277)
|+||+++|+.+|..+| ++|+++|+++......... .......+.... ..+. . ............
T Consensus 120 HDwGaivaw~la~~~P-erv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~ 198 (322)
T KOG4178|consen 120 HDWGAIVAWRLALFYP-ERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRK 198 (322)
T ss_pred ccchhHHHHHHHHhCh-hhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccc
Confidence 9999999999999999 9999999999876511111 000000000000 0000 0 000000000000
Q ss_pred cc--ccchhhhhcCccccccCCCcchhHHH-----HHhHHHHHHHHHHHhhh---hhhhcCCCccEEEEEeCCCCCCch-
Q 023794 148 SL--RNLDSARLSIPSTLKYDDSKKCYVYR-----ARLEETEQYWRAWYEGL---SEKFLSCPVPKLLLLAGTDRLDRP- 216 (277)
Q Consensus 148 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~i~~P~l~i~g~~D~~~~~- 216 (277)
.. ..... ..... ..+........+. ..+....++++.+.... ...+.++++|+++|+|..|.+.+.
T Consensus 199 ~~~~~~~~~-~~~~~--~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p 275 (322)
T KOG4178|consen 199 TPGPLIVPK-QPNEN--PLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYP 275 (322)
T ss_pred cCCccccCC-CCCCc--cchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccch
Confidence 00 00000 00000 0000000001111 11222233334333333 456688999999999999987543
Q ss_pred ---hhhhhhcCCc-cEEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 217 ---LTIGQMQGKF-QMVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 217 ---~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
+..++..++. +.++++++||+++.|+|++|++++.+|+++.
T Consensus 276 ~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 276 IFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred hHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 3456666776 7899999999999999999999999999875
No 10
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=228.22 Aligned_cols=247 Identities=14% Similarity=0.202 Sum_probs=155.8
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCC---CCCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSEND---IDLSIETMCNDVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~---~~~~~~~~~~d~~~~l~~l~~~~~~~~~lv 81 (277)
++|+|||+||++++...|+.+++.|+++|+|+++|+||||.|+.+.. ..++++++++++.++++.+ +.++++|+
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l---~~~~~~Lv 202 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL---KSDKVSLV 202 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh---CCCCceEE
Confidence 46899999999999999999999999999999999999999987653 2589999999999999999 66789999
Q ss_pred EeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhh-cc-chhh-HHHHHHHhhcCCccccch-hhhh
Q 023794 82 GHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTR-MQ-HFSS-IEKAIEWSVKGGSLRNLD-SARL 157 (277)
Q Consensus 82 G~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~-~~~~ 157 (277)
|||+||++++.+|.++| ++|+++|++++...............+... .. .+.. .................. ....
T Consensus 203 G~s~GG~ia~~~a~~~P-~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 281 (383)
T PLN03084 203 VQGYFSPPVVKYASAHP-DKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAM 281 (383)
T ss_pred EECHHHHHHHHHHHhCh-HhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHH
Confidence 99999999999999999 999999999986432110000000000000 00 0000 000000000000000000 0000
Q ss_pred cCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhh--cCCCccEEEEEeCCCCCCchhhhhhhc--CCccEEEeCC
Q 023794 158 SIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKF--LSCPVPKLLLLAGTDRLDRPLTIGQMQ--GKFQMVVVRH 233 (277)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~--~~~~~~~~~~ 233 (277)
......... ....................+..++...+ .++++|+++|+|++|.+++.+...++. .+.+++++++
T Consensus 282 ~~~~~~~~~-~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~~a~l~vIp~ 360 (383)
T PLN03084 282 VYRRPYLTS-GSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSSQHKLIELPM 360 (383)
T ss_pred HHhccccCC-cchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhcCCeEEEECC
Confidence 000000000 00000011001111000001111111111 468999999999999988876655544 4679999999
Q ss_pred CCCcccccChHHHHHHHHHHHHh
Q 023794 234 TGHAIQEDAPEEFASLILNFIAR 256 (277)
Q Consensus 234 ~gH~~~~e~p~~~~~~i~~fl~~ 256 (277)
+||+++.|+|+++++.|.+|+++
T Consensus 361 aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 361 AGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred CCCCcchhCHHHHHHHHHHHhhC
Confidence 99999999999999999999963
No 11
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6e-35 Score=224.61 Aligned_cols=241 Identities=20% Similarity=0.264 Sum_probs=152.2
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
.+|+|||+||++.+...|+.+.+.|.++|+|+++|+||||.|+.+....++.+++++++.++++++ +.++++++|||
T Consensus 33 ~~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvG~S 109 (286)
T PRK03204 33 TGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL---GLDRYLSMGQD 109 (286)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh---CCCCEEEEEEC
Confidence 568999999999998999999999998999999999999999876544689999999999999998 66789999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcchH-HhHHHHHHHHhhccch--hhHHHHHHHhhcCCccccchhhhhcCcc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMA-SLIHMQKILSTRMQHF--SSIEKAIEWSVKGGSLRNLDSARLSIPS 161 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
|||.+++.++..+| ++|+++|++++....... ................ .........................
T Consensus 110 ~Gg~va~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 185 (286)
T PRK03204 110 WGGPISMAVAVERA-DRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMA--- 185 (286)
T ss_pred ccHHHHHHHHHhCh-hheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHHH---
Confidence 99999999999999 999999998765321110 0000111000000000 0000001111111000011000000
Q ss_pred ccccCCCcchhHHHHHhHHHHHH---HHHHHhhhhhhhc--CCCccEEEEEeCCCCCCchh----hhhhhcCCccEEEeC
Q 023794 162 TLKYDDSKKCYVYRARLEETEQY---WRAWYEGLSEKFL--SCPVPKLLLLAGTDRLDRPL----TIGQMQGKFQMVVVR 232 (277)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~i~~P~l~i~g~~D~~~~~~----~~~~~~~~~~~~~~~ 232 (277)
.+................... ......++...+. .+++|+++|+|++|.++++. .+.+..+++++++++
T Consensus 186 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~ 263 (286)
T PRK03204 186 --HYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELP 263 (286)
T ss_pred --HhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcC
Confidence 000000000000000000000 0001111111111 23899999999999876443 345667999999999
Q ss_pred CCCCcccccChHHHHHHHHHHH
Q 023794 233 HTGHAIQEDAPEEFASLILNFI 254 (277)
Q Consensus 233 ~~gH~~~~e~p~~~~~~i~~fl 254 (277)
++||++++|+|+++++.|.+||
T Consensus 264 ~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 264 NAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCcccccccCHHHHHHHHHHhc
Confidence 9999999999999999999997
No 12
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=2.1e-34 Score=217.50 Aligned_cols=229 Identities=19% Similarity=0.214 Sum_probs=149.5
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
++|+|||+||++++...|..+.+.|+ +|+|+++|+||||.|+.+. ..+++++++|+.++++.+ +.++++++|||
T Consensus 1 ~~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~---~~~~~~lvG~S 74 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSY---NILPYWLVGYS 74 (242)
T ss_pred CCCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHc---CCCCeEEEEEC
Confidence 36899999999999999999999985 7999999999999998765 358999999999999998 67789999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHH--hhccchh--hHHHHHHHhhcCCccccchhhhhcCc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILS--TRMQHFS--SIEKAIEWSVKGGSLRNLDSARLSIP 160 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (277)
|||.+|+.+|.++|+++|++++++++.+.......... .... .....+. ..................
T Consensus 75 ~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 145 (242)
T PRK11126 75 LGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQA-RWQNDRQWAQRFRQEPLEQVLADWYQQPVFASL-------- 145 (242)
T ss_pred HHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHH-HHhhhHHHHHHhccCcHHHHHHHHHhcchhhcc--------
Confidence 99999999999997345999999987653322111000 0000 0000000 000111100000000000
Q ss_pred cccccCCCcchhHHHHH----hHHHHHHHHHH----HhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeC
Q 023794 161 STLKYDDSKKCYVYRAR----LEETEQYWRAW----YEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVR 232 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 232 (277)
............ .......+... ..++.+.+.++++|+++|+|++|+.+. ...+. .++++++++
T Consensus 146 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~-~~~~~~~i~ 217 (242)
T PRK11126 146 -----NAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ--ALAQQ-LALPLHVIP 217 (242)
T ss_pred -----CccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH--HHHHH-hcCeEEEeC
Confidence 000000000000 00011111110 123445678899999999999998543 12222 378999999
Q ss_pred CCCCcccccChHHHHHHHHHHHHh
Q 023794 233 HTGHAIQEDAPEEFASLILNFIAR 256 (277)
Q Consensus 233 ~~gH~~~~e~p~~~~~~i~~fl~~ 256 (277)
++||++++|+|+++++.|.+|+++
T Consensus 218 ~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 218 NAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CCCCchhhhChHHHHHHHHHHHhh
Confidence 999999999999999999999975
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.3e-34 Score=220.29 Aligned_cols=235 Identities=16% Similarity=0.193 Sum_probs=154.1
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
++|+|||+||++++...|..++..|.++|+|+++|+||||.|.... .++++++++|+.++++.+ +.++++|+|||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l---~~~~~~lvGhS 89 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDAL---QIEKATFIGHS 89 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHc---CCCceEEEEEC
Confidence 5689999999999999999999999999999999999999998654 589999999999999998 66789999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcchH-HhHHHHHHHHhh-ccchhhHHHHHHHhhcCCccccchhhhhcCccc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMA-SLIHMQKILSTR-MQHFSSIEKAIEWSVKGGSLRNLDSARLSIPST 162 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (277)
|||++++.+|..+| ++|+++|++++.+..... ............ ............................ ..
T Consensus 90 ~Gg~va~~~a~~~~-~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 165 (255)
T PRK10673 90 MGGKAVMALTALAP-DRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLL---KS 165 (255)
T ss_pred HHHHHHHHHHHhCH-hhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHH---hc
Confidence 99999999999999 999999999865432111 000000000000 0000000000000000000000000000 00
Q ss_pred cccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhh---hhhcCCccEEEeCCCCCccc
Q 023794 163 LKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTI---GQMQGKFQMVVVRHTGHAIQ 239 (277)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~---~~~~~~~~~~~~~~~gH~~~ 239 (277)
....... +. .......+.. ......+..+++|+|+|+|++|++++.+.. .+..+++++++++++||+++
T Consensus 166 ~~~~~~~----~~--~~~~~~~~~~--~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 237 (255)
T PRK10673 166 FVDGEWR----FN--VPVLWDQYPH--IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVH 237 (255)
T ss_pred CCcceeE----ee--HHHHHHhHHH--HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeee
Confidence 0000000 00 0000000000 011234567899999999999998776544 44558999999999999999
Q ss_pred ccChHHHHHHHHHHHHh
Q 023794 240 EDAPEEFASLILNFIAR 256 (277)
Q Consensus 240 ~e~p~~~~~~i~~fl~~ 256 (277)
+++|+++++.|.+||++
T Consensus 238 ~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 238 AEKPDAVLRAIRRYLND 254 (255)
T ss_pred ccCHHHHHHHHHHHHhc
Confidence 99999999999999975
No 14
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=228.24 Aligned_cols=240 Identities=19% Similarity=0.251 Sum_probs=149.8
Q ss_pred CCeEEEEccCCCCcccHH--HHHHhh--------hhcCeEEEEcCCCCCCCCCCCCC------CCcHHHHHHHHHHHH-H
Q 023794 6 GPVIFCLHGGGYSGLSFA--LAAGKI--------KEKARVVAMDLRGHGKSSSENDI------DLSIETMCNDVLAVL-K 68 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~--~~~~~l--------~~~~~vi~~d~~G~G~S~~~~~~------~~~~~~~~~d~~~~l-~ 68 (277)
+|+|||+||++++...|. .+.+.| +++|+||++|+||||.|+.+.+. .|+++++++++.+++ +
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 789999999999988875 454444 56899999999999999865431 479999999988865 7
Q ss_pred HHhcCCCCcEE-EEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhH---H-HHHHHHhhcc----chh----h
Q 023794 69 EMYGEQPPSIV-LVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLI---H-MQKILSTRMQ----HFS----S 135 (277)
Q Consensus 69 ~l~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~---~-~~~~~~~~~~----~~~----~ 135 (277)
++ +.++++ ++||||||++|+.+|.++| ++|+++|++++.+........ . .......... .+. .
T Consensus 149 ~l---gi~~~~~lvG~SmGG~vAl~~A~~~P-~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (360)
T PRK06489 149 GL---GVKHLRLILGTSMGGMHAWMWGEKYP-DFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPS 224 (360)
T ss_pred hc---CCCceeEEEEECHHHHHHHHHHHhCc-hhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHH
Confidence 77 666775 8999999999999999999 999999999876432111100 0 0000000000 000 0
Q ss_pred HHHHHHHh--hcCCccccchhhhhcCccccccCCCcchhHHHHH--------hHHHHHHHHH-HHhhhhhhhcCCCccEE
Q 023794 136 IEKAIEWS--VKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRAR--------LEETEQYWRA-WYEGLSEKFLSCPVPKL 204 (277)
Q Consensus 136 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~i~~P~l 204 (277)
........ ..... ..... .... ............ .......+.. ...+....+.+|++|+|
T Consensus 225 ~~~~~~~~~~~~~~~--~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvL 296 (360)
T PRK06489 225 LKRANPMFAIATSGG--TLAYQ-AQAP-----TRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVL 296 (360)
T ss_pred HHHHHHHHHHHHhCC--HHHHH-HhcC-----ChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEE
Confidence 00000000 00000 00000 0000 000000000000 0000000000 01234567789999999
Q ss_pred EEEeCCCCCCchhh-----hhhhcCCccEEEeCCC----CCcccccChHHHHHHHHHHHHhcC
Q 023794 205 LLLAGTDRLDRPLT-----IGQMQGKFQMVVVRHT----GHAIQEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 205 ~i~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~----gH~~~~e~p~~~~~~i~~fl~~~~ 258 (277)
+|+|++|.+++.+. +.+..|++++++++++ ||+++ |+|++|++.|.+||+++.
T Consensus 297 vI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 297 AINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred EEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 99999999887653 4556789999999996 99997 899999999999998764
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=6.9e-34 Score=216.62 Aligned_cols=239 Identities=21% Similarity=0.230 Sum_probs=157.4
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGH 83 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~ 83 (277)
.++|+|||+||++++...|..+++.|.++|+|+++|+||||.|+......++++++++++.++++.+ +.++++++||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~l~G~ 87 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL---NIERFHFVGH 87 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh---CCCcEEEEEe
Confidence 4678999999999999999999999998999999999999999876555789999999999999998 6678999999
Q ss_pred ChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHH---HHHHHhhccchhhHHHHHHH-hhcCCccccchhhhhcC
Q 023794 84 SMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHM---QKILSTRMQHFSSIEKAIEW-SVKGGSLRNLDSARLSI 159 (277)
Q Consensus 84 S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 159 (277)
||||++++.+|..+| ++|+++|++++............ ........ .......... ................
T Consensus 88 S~Gg~~a~~~a~~~~-~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (257)
T TIGR03611 88 ALGGLIGLQLALRYP-ERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAG--PEAYVHAQALFLYPADWISENAARLAA- 163 (257)
T ss_pred chhHHHHHHHHHHCh-HHhHHheeecCCCCCChhHHHHHHHHHHHHhccC--cchhhhhhhhhhccccHhhccchhhhh-
Confidence 999999999999999 89999999987544322111000 00000000 0000000000 0000000000000000
Q ss_pred ccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhh---cCCccEEEeCCCCC
Q 023794 160 PSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQM---QGKFQMVVVRHTGH 236 (277)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~---~~~~~~~~~~~~gH 236 (277)
............... .... ... ...+....+.++++|+++++|++|.+++.+...++ .++++++.++++||
T Consensus 164 ~~~~~~~~~~~~~~~---~~~~-~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 237 (257)
T TIGR03611 164 DEAHALAHFPGKANV---LRRI-NAL--EAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGH 237 (257)
T ss_pred hhhhcccccCccHHH---HHHH-HHH--HcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCC
Confidence 000000000000000 0000 000 01123455678999999999999999887655444 47889999999999
Q ss_pred cccccChHHHHHHHHHHHH
Q 023794 237 AIQEDAPEEFASLILNFIA 255 (277)
Q Consensus 237 ~~~~e~p~~~~~~i~~fl~ 255 (277)
++++++|+++++.|.+||+
T Consensus 238 ~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 238 ASNVTDPETFNRALLDFLK 256 (257)
T ss_pred CccccCHHHHHHHHHHHhc
Confidence 9999999999999999996
No 16
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=8.2e-34 Score=227.59 Aligned_cols=246 Identities=15% Similarity=0.101 Sum_probs=151.9
Q ss_pred CCeEEEEccCCCCcccHHH-HHHhhh----hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHH-HHHHHHhcCCCCcEE
Q 023794 6 GPVIFCLHGGGYSGLSFAL-AAGKIK----EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVL-AVLKEMYGEQPPSIV 79 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~-~~~~l~----~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~-~~l~~l~~~~~~~~~ 79 (277)
+|+|||+||++++...|.. +.+.|. ++|+|+++|+||||.|+.+....++++++++++. .+++.+ +.++++
T Consensus 201 k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l---g~~k~~ 277 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY---KVKSFH 277 (481)
T ss_pred CCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc---CCCCEE
Confidence 5799999999999999985 446665 4899999999999999876545689999999994 888888 677899
Q ss_pred EEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHh----hc-c--chhhHH-HHHHHhhcCC---c
Q 023794 80 LVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILST----RM-Q--HFSSIE-KAIEWSVKGG---S 148 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~----~~-~--~~~~~~-~~~~~~~~~~---~ 148 (277)
++||||||++++.+|.++| ++|+++|+++++................. .. . .+.... .......... .
T Consensus 278 LVGhSmGG~iAl~~A~~~P-e~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 356 (481)
T PLN03087 278 IVAHSLGCILALALAVKHP-GAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVI 356 (481)
T ss_pred EEEECHHHHHHHHHHHhCh-HhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhccc
Confidence 9999999999999999999 99999999997643222111111100000 00 0 000000 0000000000 0
Q ss_pred ccc---chhhhhcCccccccCCCcchhHHHH-----HhHHHHHHHHH---HH-hhhhhhhcCCCccEEEEEeCCCCCCch
Q 023794 149 LRN---LDSARLSIPSTLKYDDSKKCYVYRA-----RLEETEQYWRA---WY-EGLSEKFLSCPVPKLLLLAGTDRLDRP 216 (277)
Q Consensus 149 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~ 216 (277)
... ........... ... ......+.. ........... .. ..+...+.++++|+|+|+|++|.++++
T Consensus 357 ~~~~~~~~~~~~l~~~~-~~~-~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~ 434 (481)
T PLN03087 357 CKNHRLWEFLTRLLTRN-RMR-TFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPV 434 (481)
T ss_pred ccchHHHHHHHHHhhhh-hhh-HHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCH
Confidence 000 00000000000 000 000000000 00000000000 00 112223347899999999999999887
Q ss_pred hhhh---hhcCCccEEEeCCCCCcccc-cChHHHHHHHHHHHHhc
Q 023794 217 LTIG---QMQGKFQMVVVRHTGHAIQE-DAPEEFASLILNFIARN 257 (277)
Q Consensus 217 ~~~~---~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 257 (277)
+... +..|++++++++++||++++ |+|+++++.|.+|++..
T Consensus 435 ~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 435 ECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 7654 45589999999999999996 99999999999999764
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=2.8e-34 Score=221.35 Aligned_cols=238 Identities=20% Similarity=0.262 Sum_probs=156.0
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
++|+|||+||++++...|..+.+.|+++|+|+++|+||||.|+.+....++++++++|+.++++.+ +.++++|+|||
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~---~~~~~~lvG~S 103 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE---GLSPDGVIGHS 103 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc---CCCCceEEEEC
Confidence 468999999999999999999999998999999999999999876654789999999999999988 56689999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcchHH----hHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMAS----LIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIP 160 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (277)
|||++++.+|..+| +++++++++++........ ............ . ........... ............
T Consensus 104 ~Gg~~a~~~a~~~p-~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~--~~~~~~~~~~~~ 176 (278)
T TIGR03056 104 AGAAIALRLALDGP-VTPRMVVGINAALMPFEGMAGTLFPYMARVLACNP-F---TPPMMSRGAAD--QQRVERLIRDTG 176 (278)
T ss_pred ccHHHHHHHHHhCC-cccceEEEEcCcccccccccccccchhhHhhhhcc-c---chHHHHhhccc--CcchhHHhhccc
Confidence 99999999999999 8999999998754321110 000000000000 0 00000000000 000000000000
Q ss_pred cccccCCCcchhHHHHHh------HHHHHHHHHH-HhhhhhhhcCCCccEEEEEeCCCCCCchhhhhh---hcCCccEEE
Q 023794 161 STLKYDDSKKCYVYRARL------EETEQYWRAW-YEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQ---MQGKFQMVV 230 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~---~~~~~~~~~ 230 (277)
... .. .....+.... .........+ .......+.++++|+++|+|++|.+++.+.... ..+++++++
T Consensus 177 ~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~ 253 (278)
T TIGR03056 177 SLL--DK-AGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHV 253 (278)
T ss_pred ccc--cc-chhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEE
Confidence 000 00 0000000000 0000111111 011234567899999999999999988765444 457889999
Q ss_pred eCCCCCcccccChHHHHHHHHHHHH
Q 023794 231 VRHTGHAIQEDAPEEFASLILNFIA 255 (277)
Q Consensus 231 ~~~~gH~~~~e~p~~~~~~i~~fl~ 255 (277)
++++||+++.|+|+++++.|.+|++
T Consensus 254 ~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 254 VPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ECCCCCcccccCHHHHHHHHHHHhC
Confidence 9999999999999999999999984
No 18
>PLN02578 hydrolase
Probab=100.00 E-value=1.9e-33 Score=222.37 Aligned_cols=240 Identities=20% Similarity=0.274 Sum_probs=154.3
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
++|+|||+||++++...|..+.+.|+++|+|+++|+||||.|+.+. ..|+.+.+++++.++++.+ ..++++++|||
T Consensus 85 ~g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~l~~~i~~~---~~~~~~lvG~S 160 (354)
T PLN02578 85 EGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKAL-IEYDAMVWRDQVADFVKEV---VKEPAVLVGNS 160 (354)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcc-cccCHHHHHHHHHHHHHHh---ccCCeEEEEEC
Confidence 6688999999999999999999999999999999999999998775 3789999999999999998 55789999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcchHHh----------HHHHHHHHhhccchhhHHHHHH-Hh-hcCCccccc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASL----------IHMQKILSTRMQHFSSIEKAIE-WS-VKGGSLRNL 152 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 152 (277)
+||.+++.+|.++| ++|+++|++++......... ............. ....... .. .........
T Consensus 161 ~Gg~ia~~~A~~~p-~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (354)
T PLN02578 161 LGGFTALSTAVGYP-ELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKE--WFQRVVLGFLFWQAKQPSRI 237 (354)
T ss_pred HHHHHHHHHHHhCh-HhcceEEEECCCccccccccccccccccccchhhHHHhHHHHH--HHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999 99999999987542211000 0000000000000 0000000 00 000000000
Q ss_pred hhhhh-cCccccc------------cCCCcchhHHHHHhHHHHHHHHH-HHhhhhhhhcCCCccEEEEEeCCCCCCchhh
Q 023794 153 DSARL-SIPSTLK------------YDDSKKCYVYRARLEETEQYWRA-WYEGLSEKFLSCPVPKLLLLAGTDRLDRPLT 218 (277)
Q Consensus 153 ~~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 218 (277)
..... ....... .........+. .....+... ...+..+.+.++++|+++|+|++|.+++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~ 314 (354)
T PLN02578 238 ESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYY---RLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAK 314 (354)
T ss_pred HHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHH---HHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHH
Confidence 00000 0000000 00000000000 000000000 0112345668899999999999999887765
Q ss_pred h---hhhcCCccEEEeCCCCCcccccChHHHHHHHHHHHH
Q 023794 219 I---GQMQGKFQMVVVRHTGHAIQEDAPEEFASLILNFIA 255 (277)
Q Consensus 219 ~---~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 255 (277)
. .+..++++++++ ++||+++.|+|+++++.|.+|++
T Consensus 315 ~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 315 AEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 4 445688999999 58999999999999999999996
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=1.4e-33 Score=223.18 Aligned_cols=240 Identities=22% Similarity=0.295 Sum_probs=153.7
Q ss_pred CCCeEEEEccCCCCccc-HHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC---CCCcEE
Q 023794 5 EGPVIFCLHGGGYSGLS-FALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE---QPPSIV 79 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~-~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~ 79 (277)
.+++|||+||++++... |..++..|.+ ||+|+++|+||||.|+...+...+++++++|+.++++.+... ...+++
T Consensus 86 ~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~ 165 (349)
T PLN02385 86 PKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSF 165 (349)
T ss_pred CCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEE
Confidence 46789999999888664 6889998976 899999999999999876544468999999999999988532 123799
Q ss_pred EEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHH--hHHHHHHHHhhccchhhHHHHHHHhhcCCc-----cccc
Q 023794 80 LVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMAS--LIHMQKILSTRMQHFSSIEKAIEWSVKGGS-----LRNL 152 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 152 (277)
|+||||||++++.++.++| ++|+++|++++........ ...............+.. ....... ....
T Consensus 166 LvGhSmGG~val~~a~~~p-~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~ 239 (349)
T PLN02385 166 LFGQSMGGAVALKVHLKQP-NAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKA-----KLVPQKDLAELAFRDL 239 (349)
T ss_pred EEEeccchHHHHHHHHhCc-chhhheeEecccccccccccCchHHHHHHHHHHHHCCCc-----eecCCCccccccccCH
Confidence 9999999999999999999 9999999999864321100 000000000000000000 0000000 0000
Q ss_pred hhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc-----CCcc
Q 023794 153 DSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ-----GKFQ 227 (277)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-----~~~~ 227 (277)
............+.... ........+.. ..++...+.++++|+|+|+|++|.+++......+. ++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~-~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~ 311 (349)
T PLN02385 240 KKRKMAEYNVIAYKDKP-------RLRTAVELLRT-TQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKK 311 (349)
T ss_pred HHHHHhhcCcceeCCCc-------chHHHHHHHHH-HHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCce
Confidence 00000000000000000 00001111111 12344567889999999999999999876655442 4679
Q ss_pred EEEeCCCCCcccccChHH----HHHHHHHHHHhcC
Q 023794 228 MVVVRHTGHAIQEDAPEE----FASLILNFIARNR 258 (277)
Q Consensus 228 ~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~~~ 258 (277)
+++++++||+++.|+|++ +.+.|.+||+++.
T Consensus 312 l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 312 LKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 999999999999999976 8889999998764
No 20
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=1.5e-33 Score=210.60 Aligned_cols=220 Identities=26% Similarity=0.382 Sum_probs=151.2
Q ss_pred EEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCC-CCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhH
Q 023794 9 IFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSEND-IDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGG 87 (277)
Q Consensus 9 vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg 87 (277)
|||+||++++...|..+++.|+++|+|+++|+||+|.|+.... ..++++++++|+.++++.+ +.++++++|||+||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL---GIKKVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT---TTSSEEEEEETHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc---cccccccccccccc
Confidence 7999999999999999999998899999999999999987653 3679999999999999999 55789999999999
Q ss_pred HHHHHHHHHhcccccceEEEEccCCCcchHHh-HHHHHHHHhhccchh-hHHHHHHHhhcCCccccchhhhhcCcccccc
Q 023794 88 SVAVHVAAKKTLRSLHGLVVVDVVEGTAMASL-IHMQKILSTRMQHFS-SIEKAIEWSVKGGSLRNLDSARLSIPSTLKY 165 (277)
Q Consensus 88 ~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (277)
.+++.++.++| ++|+++|++++......... ......+........ ............ .....
T Consensus 78 ~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------- 142 (228)
T PF12697_consen 78 MIALRLAARYP-DRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYR----WFDGD---------- 142 (228)
T ss_dssp HHHHHHHHHSG-GGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHTHH----------
T ss_pred ccccccccccc-cccccceeecccccccccccccccchhhhhhhhcccccccccccccccc----ccccc----------
Confidence 99999999999 99999999999775432210 000111111000000 000000000000 00000
Q ss_pred CCCcchhHHHHHhHHHHHHHHH--HHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhh---cCCccEEEeCCCCCcccc
Q 023794 166 DDSKKCYVYRARLEETEQYWRA--WYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQM---QGKFQMVVVRHTGHAIQE 240 (277)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~ 240 (277)
................+.. ...+....+..+++|+++++|++|.+++.+..+++ .+++++++++++||++++
T Consensus 143 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 143 ---EPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFL 219 (228)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHH
T ss_pred ---cccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHH
Confidence 0000001111122222222 33455567788899999999999999886655554 489999999999999999
Q ss_pred cChHHHHHH
Q 023794 241 DAPEEFASL 249 (277)
Q Consensus 241 e~p~~~~~~ 249 (277)
|+|++|++.
T Consensus 220 ~~p~~~~~a 228 (228)
T PF12697_consen 220 EQPDEVAEA 228 (228)
T ss_dssp HSHHHHHHH
T ss_pred HCHHHHhcC
Confidence 999999864
No 21
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2.6e-34 Score=221.83 Aligned_cols=236 Identities=16% Similarity=0.180 Sum_probs=147.0
Q ss_pred CCCeEEEEccCCCCcccHHHH---HHhh-hhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALA---AGKI-KEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~---~~~l-~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
++|+|||+||++++...|..+ +..+ .++|+|+++|+||||.|+...........+++|+.++++.+ +.+++++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~l 105 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL---DIEKAHL 105 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc---CCCCeeE
Confidence 678999999999888888643 3344 44899999999999999865321122225689999999998 7778999
Q ss_pred EEeChhHHHHHHHHHHhcccccceEEEEccCCCcchH----HhHHHHHHHHhhcc-chhhHHHHHHHhhcCCccccchhh
Q 023794 81 VGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMA----SLIHMQKILSTRMQ-HFSSIEKAIEWSVKGGSLRNLDSA 155 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
+||||||++++.+|.++| ++|+++|++++....... .............. ................. .....
T Consensus 106 vG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 182 (282)
T TIGR03343 106 VGNSMGGATALNFALEYP-DRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQS--LITEE 182 (282)
T ss_pred EEECchHHHHHHHHHhCh-HhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcc--cCcHH
Confidence 999999999999999999 999999999875321100 00011111100000 00011111000000000 00000
Q ss_pred hhcCccccccCCCcchhHHHHHhHHHHHHHHH------HHhhhhhhhcCCCccEEEEEeCCCCCCchhhh---hhhcCCc
Q 023794 156 RLSIPSTLKYDDSKKCYVYRARLEETEQYWRA------WYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTI---GQMQGKF 226 (277)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~---~~~~~~~ 226 (277)
.... ... ............... ...+....+.++++|+|+|+|++|.+++.+.. .+..+++
T Consensus 183 ~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~ 252 (282)
T TIGR03343 183 LLQG--RWE--------NIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDA 252 (282)
T ss_pred HHHh--HHH--------HhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCC
Confidence 0000 000 000000000000000 01123445688999999999999998886654 4456899
Q ss_pred cEEEeCCCCCcccccChHHHHHHHHHHHHh
Q 023794 227 QMVVVRHTGHAIQEDAPEEFASLILNFIAR 256 (277)
Q Consensus 227 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 256 (277)
++++++++||+++.|+|++|++.|.+||+.
T Consensus 253 ~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 253 QLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred EEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 999999999999999999999999999963
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=2.9e-33 Score=212.24 Aligned_cols=230 Identities=21% Similarity=0.322 Sum_probs=154.9
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
++|+|||+||++.+...|..+++.|.++|+|+++|+||||.|+... ..++++++++|+.++++.+ +.++++++|||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~---~~~~v~liG~S 87 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHL---GIERAVFCGLS 87 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh---CCCceEEEEeC
Confidence 5688999999999999999999999889999999999999997654 3679999999999999998 66789999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhH-HHHHHHhhcCCccccchhhhhcCcccc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSI-EKAIEWSVKGGSLRNLDSARLSIPSTL 163 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (277)
|||++++.+|..+| ++|++++++++........... .............. ..............
T Consensus 88 ~Gg~~a~~~a~~~p-~~v~~li~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 152 (251)
T TIGR02427 88 LGGLIAQGLAARRP-DRVRALVLSNTAAKIGTPESWN-ARIAAVRAEGLAALADAVLERWFTPGFRE------------- 152 (251)
T ss_pred chHHHHHHHHHHCH-HHhHHHhhccCccccCchhhHH-HHHhhhhhccHHHHHHHHHHHHccccccc-------------
Confidence 99999999999999 9999999998754322211100 00000000000000 00111111000000
Q ss_pred ccCCCcchhHHHHH-----hHHHHHHHHHH-HhhhhhhhcCCCccEEEEEeCCCCCCchhhhhh---hcCCccEEEeCCC
Q 023794 164 KYDDSKKCYVYRAR-----LEETEQYWRAW-YEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQ---MQGKFQMVVVRHT 234 (277)
Q Consensus 164 ~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~---~~~~~~~~~~~~~ 234 (277)
........+... ........... ..+....+.++++|+++++|++|.+++.+.... ..++.++++++++
T Consensus 153 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (251)
T TIGR02427 153 --AHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGA 230 (251)
T ss_pred --CChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCC
Confidence 000000000000 00000000000 112345567889999999999999988765443 4478899999999
Q ss_pred CCcccccChHHHHHHHHHHHH
Q 023794 235 GHAIQEDAPEEFASLILNFIA 255 (277)
Q Consensus 235 gH~~~~e~p~~~~~~i~~fl~ 255 (277)
||++++++|+++.+.+.+|++
T Consensus 231 gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 231 GHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCcccccChHHHHHHHHHHhC
Confidence 999999999999999999974
No 23
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=3.6e-33 Score=211.05 Aligned_cols=233 Identities=19% Similarity=0.256 Sum_probs=147.2
Q ss_pred CCCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 3 GTEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
|++.|+|||+||++++...|..+.+.|.++|+|+++|+||||.|+... .++++++++++.+.+ .++++++|
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~-------~~~~~lvG 71 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFG--PLSLADAAEAIAAQA-------PDPAIWLG 71 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCC--CcCHHHHHHHHHHhC-------CCCeEEEE
Confidence 434589999999999999999999999989999999999999987643 467888877766543 25799999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHH--h-----HHHHHHHHhhccchh-hHHHHHHHhhcCCccccchh
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMAS--L-----IHMQKILSTRMQHFS-SIEKAIEWSVKGGSLRNLDS 154 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 154 (277)
|||||.+++.+|.++| ++++++|++++.+...... . ............... ............... ...
T Consensus 72 ~S~Gg~~a~~~a~~~p-~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 148 (245)
T TIGR01738 72 WSLGGLVALHIAATHP-DRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPT--ARQ 148 (245)
T ss_pred EcHHHHHHHHHHHHCH-HhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc--cch
Confidence 9999999999999999 9999999998765321100 0 000000000000000 000000000000000 000
Q ss_pred hhhcCccccccCCCcchhHHHHHhHHHHHHHHH-HHhhhhhhhcCCCccEEEEEeCCCCCCchhhh---hhhcCCccEEE
Q 023794 155 ARLSIPSTLKYDDSKKCYVYRARLEETEQYWRA-WYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTI---GQMQGKFQMVV 230 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~---~~~~~~~~~~~ 230 (277)
................. ......+.. ...+....+.++++|+++|+|++|.+++.+.. .+..+++++++
T Consensus 149 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~ 221 (245)
T TIGR01738 149 DARALKQTLLARPTPNV-------QVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYI 221 (245)
T ss_pred HHHHHHHHhhccCCCCH-------HHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEE
Confidence 00000000000000000 000000100 01234456689999999999999998887654 44568899999
Q ss_pred eCCCCCcccccChHHHHHHHHHHH
Q 023794 231 VRHTGHAIQEDAPEEFASLILNFI 254 (277)
Q Consensus 231 ~~~~gH~~~~e~p~~~~~~i~~fl 254 (277)
++++||++++|+|+++++.|.+|+
T Consensus 222 ~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 222 FAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred eCCCCCCccccCHHHHHHHHHhhC
Confidence 999999999999999999999985
No 24
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=3.8e-32 Score=214.41 Aligned_cols=249 Identities=14% Similarity=0.133 Sum_probs=147.4
Q ss_pred CCCCCeEEEEccCCCCcc------------cHHHHHH---hh-hhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 023794 3 GTEGPVIFCLHGGGYSGL------------SFALAAG---KI-KEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAV 66 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~------------~~~~~~~---~l-~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~ 66 (277)
|.+++++||+||+.++.. .|..++. .| +++|+||++|+||||.|.. ..++++++++|+.++
T Consensus 54 G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~~~~~~~~a~dl~~l 130 (343)
T PRK08775 54 GPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---VPIDTADQADAIALL 130 (343)
T ss_pred ccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---CCCCHHHHHHHHHHH
Confidence 544556788877766655 6888886 57 4689999999999998842 257889999999999
Q ss_pred HHHHhcCCCCc-EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHh--HHHHHHHHhhccc---hhhHHHHH
Q 023794 67 LKEMYGEQPPS-IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASL--IHMQKILSTRMQH---FSSIEKAI 140 (277)
Q Consensus 67 l~~l~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~ 140 (277)
++++ +.++ ++|+||||||++|+.+|.++| ++|+++|++++......... ............. ........
T Consensus 131 l~~l---~l~~~~~lvG~SmGG~vA~~~A~~~P-~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (343)
T PRK08775 131 LDAL---GIARLHAFVGYSYGALVGLQFASRHP-ARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALA 206 (343)
T ss_pred HHHc---CCCcceEEEEECHHHHHHHHHHHHCh-HhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHH
Confidence 9999 6655 479999999999999999999 99999999998654321110 0000000000000 00000000
Q ss_pred HH--hhcCCccccchhhhhcCccccccCCCcchhHHHH-----HhHH-HHHHHHHHHhh--h-hhhhcCCCccEEEEEeC
Q 023794 141 EW--SVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRA-----RLEE-TEQYWRAWYEG--L-SEKFLSCPVPKLLLLAG 209 (277)
Q Consensus 141 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~--~-~~~~~~i~~P~l~i~g~ 209 (277)
.. .........+.....................+.. .... ....+...... . ...+.++++|+|+|+|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~ 286 (343)
T PRK08775 207 RQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVE 286 (343)
T ss_pred HHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeC
Confidence 00 0000000000000000000000000000000000 0000 00000001111 1 12357899999999999
Q ss_pred CCCCCchhhhh---hhc-CCccEEEeCC-CCCcccccChHHHHHHHHHHHHhcC
Q 023794 210 TDRLDRPLTIG---QMQ-GKFQMVVVRH-TGHAIQEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 210 ~D~~~~~~~~~---~~~-~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 258 (277)
+|.+++..... +.. ++++++++++ +||++++|+|++|++.|.+||++..
T Consensus 287 ~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 287 GDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred CCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 99988865443 333 6899999985 9999999999999999999998764
No 25
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=3.4e-33 Score=215.36 Aligned_cols=245 Identities=22% Similarity=0.262 Sum_probs=154.2
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhc--CeEEEEcCCCCC-CCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEK--ARVVAMDLRGHG-KSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G-~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lv 81 (277)
++++||++|||+++...|+.+++.|.+. +.|+++|++|+| .|..+.+..|+..++++.+..+.... ..++++++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~---~~~~~~lv 133 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV---FVEPVSLV 133 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh---cCcceEEE
Confidence 6899999999999999999999999885 999999999999 55556666799999999999999988 56679999
Q ss_pred EeChhHHHHHHHHHHhcccccceEE---EEccCCCcchHHhHHHHHHHHhhc---cchh-----hHHHHHHHhhcCCccc
Q 023794 82 GHSMGGSVAVHVAAKKTLRSLHGLV---VVDVVEGTAMASLIHMQKILSTRM---QHFS-----SIEKAIEWSVKGGSLR 150 (277)
Q Consensus 82 G~S~Gg~ia~~~a~~~p~~~v~~lv---l~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~ 150 (277)
|||+||.+|+.+|+.+| +.|++++ ++.+.................... .... ................
T Consensus 134 ghS~Gg~va~~~Aa~~P-~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 212 (326)
T KOG1454|consen 134 GHSLGGIVALKAAAYYP-ETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKV 212 (326)
T ss_pred EeCcHHHHHHHHHHhCc-ccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceee
Confidence 99999999999999999 9999999 544443322211111111111000 0000 0000000000000000
Q ss_pred ---cchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHH---hhhhhhhcCCC-ccEEEEEeCCCCCCchhhhhh--
Q 023794 151 ---NLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWY---EGLSEKFLSCP-VPKLLLLAGTDRLDRPLTIGQ-- 221 (277)
Q Consensus 151 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~-- 221 (277)
.............. ... .....+.. ......... ......+.++. +|+|+|+|++|++++.+....
T Consensus 213 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~ 287 (326)
T KOG1454|consen 213 VYTDPSRLLEKLLHLLS-RPV-KEHFHRDA---RLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELK 287 (326)
T ss_pred eccccccchhhhhhhee-ccc-ccchhhhh---eeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHH
Confidence 00000000000000 000 00000000 000000000 11223345666 999999999999998875433
Q ss_pred -hcCCccEEEeCCCCCcccccChHHHHHHHHHHHHhcC
Q 023794 222 -MQGKFQMVVVRHTGHAIQEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 222 -~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 258 (277)
..+++++++++++||.+++|.|++++..|..|++...
T Consensus 288 ~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 288 KKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred hhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 3489999999999999999999999999999998754
No 26
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=8.5e-32 Score=207.03 Aligned_cols=232 Identities=15% Similarity=0.181 Sum_probs=149.7
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~lvG 82 (277)
.++.|+++||++++...|..+++.|.+ ||+|+++|+||||.|+.......++.++++|+.+.++.+... ..++++|+|
T Consensus 24 ~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG 103 (276)
T PHA02857 24 PKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLG 103 (276)
T ss_pred CCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 345677779999999999999999977 899999999999999764322346777788888888766432 235799999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhh-------
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSA------- 155 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 155 (277)
|||||++|+.+|.++| ++|+++|++++.......... ..... ..................
T Consensus 104 ~S~GG~ia~~~a~~~p-~~i~~lil~~p~~~~~~~~~~---~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (276)
T PHA02857 104 HSMGATISILAAYKNP-NLFTAMILMSPLVNAEAVPRL---NLLAA---------KLMGIFYPNKIVGKLCPESVSRDMD 170 (276)
T ss_pred cCchHHHHHHHHHhCc-cccceEEEeccccccccccHH---HHHHH---------HHHHHhCCCCccCCCCHhhccCCHH
Confidence 9999999999999999 899999999986432111000 00000 000000000000000000
Q ss_pred --hhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc----CCccEE
Q 023794 156 --RLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ----GKFQMV 229 (277)
Q Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~----~~~~~~ 229 (277)
............ .....+. .. ......+..+.+.++++|+|+|+|++|.+++.+...++. ++++++
T Consensus 171 ~~~~~~~~~~~~~~-~~~~~~~---~~----~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~ 242 (276)
T PHA02857 171 EVYKYQYDPLVNHE-KIKAGFA---SQ----VLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIK 242 (276)
T ss_pred HHHHHhcCCCccCC-CccHHHH---HH----HHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEE
Confidence 000000000000 0000000 00 001122344567889999999999999999887765543 457899
Q ss_pred EeCCCCCcccccCh---HHHHHHHHHHHHhc
Q 023794 230 VVRHTGHAIQEDAP---EEFASLILNFIARN 257 (277)
Q Consensus 230 ~~~~~gH~~~~e~p---~~~~~~i~~fl~~~ 257 (277)
+++++||+++.|++ +++.+.+.+||++.
T Consensus 243 ~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 243 IYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999976 57999999999875
No 27
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.6e-31 Score=210.34 Aligned_cols=234 Identities=17% Similarity=0.251 Sum_probs=150.5
Q ss_pred CCCeEEEEccCCCCc-ccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC---CCCcEE
Q 023794 5 EGPVIFCLHGGGYSG-LSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE---QPPSIV 79 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~-~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~ 79 (277)
.+++|||+||++.+. ..|..+...|.+ ||+|+++|+||||.|+.......+++.+++|+.++++.+... ...+++
T Consensus 58 ~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~ 137 (330)
T PLN02298 58 PRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRF 137 (330)
T ss_pred CceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEE
Confidence 456799999998664 356677777876 899999999999999865444568999999999999998642 124799
Q ss_pred EEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHh--HHHHHHHHhhccchhhHHHHHHHhhcCCccc---c-ch
Q 023794 80 LVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASL--IHMQKILSTRMQHFSSIEKAIEWSVKGGSLR---N-LD 153 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~ 153 (277)
|+||||||++++.++..+| ++|+++|++++......... ...... .............. . ..
T Consensus 138 l~GhSmGG~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 205 (330)
T PLN02298 138 LYGESMGGAICLLIHLANP-EGFDGAVLVAPMCKISDKIRPPWPIPQI-----------LTFVARFLPTLAIVPTADLLE 205 (330)
T ss_pred EEEecchhHHHHHHHhcCc-ccceeEEEecccccCCcccCCchHHHHH-----------HHHHHHHCCCCccccCCCccc
Confidence 9999999999999999999 89999999998643221100 000000 00000000000000 0 00
Q ss_pred -------hhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc---
Q 023794 154 -------SARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ--- 223 (277)
Q Consensus 154 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~--- 223 (277)
...........+..... ........ .........+..+++|+|+|+|++|.+++.+...++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i 277 (330)
T PLN02298 206 KSVKVPAKKIIAKRNPMRYNGKPR-------LGTVVELL-RVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEA 277 (330)
T ss_pred ccccCHHHHHHHHhCccccCCCcc-------HHHHHHHH-HHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHh
Confidence 00000000000000000 00000101 1111234556789999999999999999987766543
Q ss_pred --CCccEEEeCCCCCcccccChH----HHHHHHHHHHHhcC
Q 023794 224 --GKFQMVVVRHTGHAIQEDAPE----EFASLILNFIARNR 258 (277)
Q Consensus 224 --~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~fl~~~~ 258 (277)
++.++++++++||++++++|+ .+.+.|.+||++..
T Consensus 278 ~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 278 KSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred ccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 467999999999999999885 47788899998875
No 28
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=4e-32 Score=201.66 Aligned_cols=248 Identities=21% Similarity=0.287 Sum_probs=151.3
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCC---CCCcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSEND---IDLSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~---~~~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
.++.++|||||+|.+...|-.-.+.|++.++|+++|++|+|+|+.+.- .......+++-+.+.-... ++++.+|
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~---~L~Kmil 164 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKM---GLEKMIL 164 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHc---CCcceeE
Confidence 357899999999999999999999999999999999999999998752 1234446666666666665 7889999
Q ss_pred EEeChhHHHHHHHHHHhcccccceEEEEccCCCcchH----H----hHHHHHHHHhhccchhhHHHHHHHhhcCC--ccc
Q 023794 81 VGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMA----S----LIHMQKILSTRMQHFSSIEKAIEWSVKGG--SLR 150 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 150 (277)
+|||+||++|..||.+|| ++|+.|||++|....... . ..............+.. ...++.+-.-+ ...
T Consensus 165 vGHSfGGYLaa~YAlKyP-erV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nP-l~~LR~~Gp~Gp~Lv~ 242 (365)
T KOG4409|consen 165 VGHSFGGYLAAKYALKYP-ERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNP-LALLRLMGPLGPKLVS 242 (365)
T ss_pred eeccchHHHHHHHHHhCh-HhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCH-HHHHHhccccchHHHh
Confidence 999999999999999999 999999999997543311 0 01111111111111110 01111110000 000
Q ss_pred cchhhhh-cCccccccCCCcchhHHHHHhH--HHHHHHHHH-------HhhhhhhhcCCC--ccEEEEEeCCCCCCch--
Q 023794 151 NLDSARL-SIPSTLKYDDSKKCYVYRARLE--ETEQYWRAW-------YEGLSEKFLSCP--VPKLLLLAGTDRLDRP-- 216 (277)
Q Consensus 151 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~i~--~P~l~i~g~~D~~~~~-- 216 (277)
....... ..+. ....+....+.+..... ..+..+... ...+.+.+..++ ||+++|+|++|.+...
T Consensus 243 ~~~~d~~~k~~~-~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g 321 (365)
T KOG4409|consen 243 RLRPDRFRKFPS-LIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAG 321 (365)
T ss_pred hhhHHHHHhccc-cchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccchhH
Confidence 1111110 1111 00010000011111000 001111111 122334444444 9999999999986432
Q ss_pred hhhhh--hcCCccEEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 217 LTIGQ--MQGKFQMVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 217 ~~~~~--~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
..+.+ ....++.++++++||.+.+++|+.|++.+.+++++.
T Consensus 322 ~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 322 LEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 23333 345689999999999999999999999999999763
No 29
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=100.00 E-value=1.2e-31 Score=214.89 Aligned_cols=238 Identities=21% Similarity=0.298 Sum_probs=158.1
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
++++|||+||++++...|..+...|.++|+|+++|+||||.|.... ...+++++++++.++++.+ +.++++++|||
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~lvG~S 205 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAV-GAGSLDELAAAVLAFLDAL---GIERAHLVGHS 205 (371)
T ss_pred CCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhc---CCccEEEEeec
Confidence 4789999999999999999999999889999999999999996554 3678999999999999988 66789999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccccc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLK 164 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (277)
+||.+++.+|..+| +++.+++++++..............+... .........+......... ...... .....
T Consensus 206 ~Gg~~a~~~a~~~~-~~v~~lv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~ 278 (371)
T PRK14875 206 MGGAVALRLAARAP-QRVASLTLIAPAGLGPEINGDYIDGFVAA--ESRRELKPVLELLFADPAL--VTRQMV--EDLLK 278 (371)
T ss_pred hHHHHHHHHHHhCc-hheeEEEEECcCCcCcccchhHHHHhhcc--cchhHHHHHHHHHhcChhh--CCHHHH--HHHHH
Confidence 99999999999999 89999999987532211100000000000 0000011111111110000 000000 00000
Q ss_pred cCCCcchhHHHHHhHHHHHHH-HH--HHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCCCCccccc
Q 023794 165 YDDSKKCYVYRARLEETEQYW-RA--WYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHTGHAIQED 241 (277)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 241 (277)
+.... ............. .. ...+....+.++++|+|+++|++|.+++......+.+++++.+++++||+++++
T Consensus 279 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~~~~~~~~~~~~gH~~~~e 355 (371)
T PRK14875 279 YKRLD---GVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLPDGVAVHVLPGAGHMPQME 355 (371)
T ss_pred Hhccc---cHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhccCCCeEEEeCCCCCChhhh
Confidence 00000 0000000000000 00 011233456788999999999999999988888787889999999999999999
Q ss_pred ChHHHHHHHHHHHHh
Q 023794 242 APEEFASLILNFIAR 256 (277)
Q Consensus 242 ~p~~~~~~i~~fl~~ 256 (277)
+|+++++.|.+||++
T Consensus 356 ~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 356 AAADVNRLLAEFLGK 370 (371)
T ss_pred CHHHHHHHHHHHhcc
Confidence 999999999999975
No 30
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=3.1e-31 Score=211.30 Aligned_cols=251 Identities=12% Similarity=0.070 Sum_probs=150.7
Q ss_pred CCCeEEEEccCCCCccc-------------HHHHH----HhhhhcCeEEEEcCCCC-CCCCCCCC-------------CC
Q 023794 5 EGPVIFCLHGGGYSGLS-------------FALAA----GKIKEKARVVAMDLRGH-GKSSSEND-------------ID 53 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~-------------~~~~~----~~l~~~~~vi~~d~~G~-G~S~~~~~-------------~~ 53 (277)
++|+|||+||++++... |..++ ..+.++|+||++|++|+ |.|+.+.. ..
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 36899999999999874 66665 34467999999999983 54433210 15
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCc-EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHH---HHHHHHhh
Q 023794 54 LSIETMCNDVLAVLKEMYGEQPPS-IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIH---MQKILSTR 129 (277)
Q Consensus 54 ~~~~~~~~d~~~~l~~l~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~ 129 (277)
++++++++++.++++++ +.++ ++++||||||++++.+|.++| ++|+++|++++.+......... ........
T Consensus 127 ~~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~ 202 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDYP-DRVRSALVIASSARLSAQNIAFNEVARQAILAD 202 (379)
T ss_pred CCHHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhCh-HhhhEEEEECCCcccCHHHHHHHHHHHHHHHhC
Confidence 89999999999999999 6677 589999999999999999999 9999999999876543221111 11111100
Q ss_pred cc----------chhhHHHHHHHhhcCCccccchhhhhcCccc-------cccCCCcchhHHH----------HHhHHHH
Q 023794 130 MQ----------HFSSIEKAIEWSVKGGSLRNLDSARLSIPST-------LKYDDSKKCYVYR----------ARLEETE 182 (277)
Q Consensus 130 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~----------~~~~~~~ 182 (277)
.. ..+........................+... ..+........+. .......
T Consensus 203 ~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~ 282 (379)
T PRK00175 203 PDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYL 282 (379)
T ss_pred CCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHH
Confidence 00 0000000000000000000000000000000 0000000000000 0000000
Q ss_pred ---HHHHHHH------hhhhhhhcCCCccEEEEEeCCCCCCchhhhhh---hcCCc----cEEEeC-CCCCcccccChHH
Q 023794 183 ---QYWRAWY------EGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQ---MQGKF----QMVVVR-HTGHAIQEDAPEE 245 (277)
Q Consensus 183 ---~~~~~~~------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~---~~~~~----~~~~~~-~~gH~~~~e~p~~ 245 (277)
..+.... .++...+.+|++|+|+|+|++|.+++++..+. .++++ ++++++ ++||++++|+|++
T Consensus 283 ~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~ 362 (379)
T PRK00175 283 YLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPR 362 (379)
T ss_pred HHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHH
Confidence 0111100 13556778999999999999999988776554 44555 677775 8999999999999
Q ss_pred HHHHHHHHHHhcCC
Q 023794 246 FASLILNFIARNRI 259 (277)
Q Consensus 246 ~~~~i~~fl~~~~~ 259 (277)
|++.|.+||+++..
T Consensus 363 ~~~~L~~FL~~~~~ 376 (379)
T PRK00175 363 YGRLVRAFLERAAR 376 (379)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999998654
No 31
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=1.5e-31 Score=211.13 Aligned_cols=247 Identities=13% Similarity=0.061 Sum_probs=144.0
Q ss_pred CCeEEEEccCCCCcccHHHHH---Hhhh-hcCeEEEEcCCCCCCCCCCCC--CCCcHHH-----HHHHHHH----HHHHH
Q 023794 6 GPVIFCLHGGGYSGLSFALAA---GKIK-EKARVVAMDLRGHGKSSSEND--IDLSIET-----MCNDVLA----VLKEM 70 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~---~~l~-~~~~vi~~d~~G~G~S~~~~~--~~~~~~~-----~~~d~~~----~l~~l 70 (277)
.|+||++||++++...|..++ +.|. ++|+||++|+||||.|+.+.. ..+++++ +++|+.+ +++++
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 120 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF 120 (339)
T ss_pred CCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh
Confidence 356777777777777776654 4665 589999999999999986542 1344443 5666655 66777
Q ss_pred hcCCCCc-EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHH---HHHHHHhhcc----ch-----hhHH
Q 023794 71 YGEQPPS-IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIH---MQKILSTRMQ----HF-----SSIE 137 (277)
Q Consensus 71 ~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~----~~-----~~~~ 137 (277)
+.++ ++||||||||++|+.+|.++| ++|+++|++++........... ....+..... .+ ....
T Consensus 121 ---gi~~~~~lvG~S~GG~va~~~a~~~P-~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 196 (339)
T PRK07581 121 ---GIERLALVVGWSMGAQQTYHWAVRYP-DMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLR 196 (339)
T ss_pred ---CCCceEEEEEeCHHHHHHHHHHHHCH-HHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHH
Confidence 7778 479999999999999999999 9999999998765432211110 0000000000 00 0000
Q ss_pred HHHHHh---------hcCCccccc-----hhhhhcCccccccCCCcchhHHHHHhHHHHHH--HHHH--HhhhhhhhcCC
Q 023794 138 KAIEWS---------VKGGSLRNL-----DSARLSIPSTLKYDDSKKCYVYRARLEETEQY--WRAW--YEGLSEKFLSC 199 (277)
Q Consensus 138 ~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~i 199 (277)
...... ......... ................. ......+...... .... ..+....+.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I 274 (339)
T PRK07581 197 AHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDP--NNLLAMLWTWQRGDISRNPAYGGDLAAALGSI 274 (339)
T ss_pred HHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCc--ccHHHHHHHhhhcccccCcccCCCHHHHHhcC
Confidence 000000 000000000 00000000000000000 0000000000000 0000 01345667889
Q ss_pred CccEEEEEeCCCCCCchhhh---hhhcCCccEEEeCC-CCCcccccChHHHHHHHHHHHHhcC
Q 023794 200 PVPKLLLLAGTDRLDRPLTI---GQMQGKFQMVVVRH-TGHAIQEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~---~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 258 (277)
++|+|+|+|++|.++++... .+.+++++++++++ +||++++|+|++++..|.+||++..
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 99999999999999886544 44558899999998 9999999999999999999998853
No 32
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=100.00 E-value=1.2e-31 Score=203.32 Aligned_cols=240 Identities=22% Similarity=0.289 Sum_probs=150.4
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCC-CCCcHHHHHHH-HHHHHHHHhcCCCCcEEEEEe
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSEND-IDLSIETMCND-VLAVLKEMYGEQPPSIVLVGH 83 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~-~~~~~~~~~~d-~~~~l~~l~~~~~~~~~lvG~ 83 (277)
+|+|||+||++++...|..+.+.|+++|+|+++|+||||.|+.+.. ..+++++.+++ +..+++.+ +.++++++||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~ 77 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL---GIEPFFLVGY 77 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc---CCCeEEEEEe
Confidence 4889999999999999999999998899999999999999977543 35788899988 77777777 5678999999
Q ss_pred ChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHh-hccchh--hHHHHHHHhhcCCcccc---chhhhh
Q 023794 84 SMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILST-RMQHFS--SIEKAIEWSVKGGSLRN---LDSARL 157 (277)
Q Consensus 84 S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~ 157 (277)
|+||.+++.+|.++| +.|++++++++.+................ ....+. ..............+.. ......
T Consensus 78 S~Gg~ia~~~a~~~~-~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (251)
T TIGR03695 78 SMGGRIALYYALQYP-ERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQR 156 (251)
T ss_pred ccHHHHHHHHHHhCc-hheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHh
Confidence 999999999999999 89999999998654322111000000000 000000 00000000000000000 000000
Q ss_pred -cCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCch--hhhhhhcCCccEEEeCCC
Q 023794 158 -SIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRP--LTIGQMQGKFQMVVVRHT 234 (277)
Q Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~~~~~~ 234 (277)
....... . ......... ..........+....+..+++|+++|+|++|...+. +.+.+..+++++++++++
T Consensus 157 ~~~~~~~~--~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (251)
T TIGR03695 157 QALRAKRL--A-NNPEGLAKM---LRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQIAKEMQKLLPNLTLVIIANA 230 (251)
T ss_pred HHHHHhcc--c-ccchHHHHH---HHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHHHHHHHHhcCCCCcEEEEcCC
Confidence 0000000 0 000000000 000000011223344678999999999999976532 223444578899999999
Q ss_pred CCcccccChHHHHHHHHHHHH
Q 023794 235 GHAIQEDAPEEFASLILNFIA 255 (277)
Q Consensus 235 gH~~~~e~p~~~~~~i~~fl~ 255 (277)
||++++|+|+++++.|.+|++
T Consensus 231 gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 231 GHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCCcCccChHHHHHHHHHHhC
Confidence 999999999999999999984
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=5.9e-32 Score=206.10 Aligned_cols=242 Identities=15% Similarity=0.147 Sum_probs=148.6
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
+++|+|||+||++++...|..+...|.+ +|+|+++|+||||.|.......++++++++++.++++.+.. .++++|+|
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~--~~~v~lvG 93 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPE--NEKVILVG 93 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCC--CCCEEEEE
Confidence 4678999999999999999999999975 89999999999998865443357999999999999998732 36899999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHH---hhcCCccccchh--hhh
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEW---SVKGGSLRNLDS--ARL 157 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~ 157 (277)
|||||++++.++..+| ++|+++|++++........ ..... ... ++........ ............ ...
T Consensus 94 hS~GG~v~~~~a~~~p-~~v~~lv~~~~~~~~~g~~--~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
T PLN02211 94 HSAGGLSVTQAIHRFP-KKICLAVYVAATMLKLGFQ--TDEDM-KDG---VPDLSEFGDVYELGFGLGPDQPPTSAIIKK 166 (273)
T ss_pred ECchHHHHHHHHHhCh-hheeEEEEeccccCCCCCC--HHHHH-hcc---ccchhhhccceeeeeccCCCCCCceeeeCH
Confidence 9999999999999999 9999999998753211000 00000 000 0000000000 000000000000 000
Q ss_pred cCccccccCCCcc-hhHHHHHhHH--HHHHHHHHHhhhhhhhcCC-CccEEEEEeCCCCCCchhhhhhhc---CCccEEE
Q 023794 158 SIPSTLKYDDSKK-CYVYRARLEE--TEQYWRAWYEGLSEKFLSC-PVPKLLLLAGTDRLDRPLTIGQMQ---GKFQMVV 230 (277)
Q Consensus 158 ~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~---~~~~~~~ 230 (277)
.......+..... ...+...... ....+.. .+.......+ ++|+++|.|++|..++++..+.+. +..+++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~ 244 (273)
T PLN02211 167 EFRRKILYQMSPQEDSTLAAMLLRPGPILALRS--ARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYE 244 (273)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCcCcccccc--ccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEE
Confidence 0000000000000 0000000000 0000000 0111112344 789999999999999877655544 6678999
Q ss_pred eCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 231 VRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 231 ~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
++ +||.+++++|+++++.|.++....
T Consensus 245 l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 245 LE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred EC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 96 899999999999999999987654
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=1.4e-30 Score=201.60 Aligned_cols=242 Identities=21% Similarity=0.268 Sum_probs=146.5
Q ss_pred CCCeEEEEccCCCCc-ccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCC--CcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 5 EGPVIFCLHGGGYSG-LSFALAAGKIKE-KARVVAMDLRGHGKSSSENDID--LSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~-~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~--~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
.+++|||+||++++. ..|..+...+.+ +|+|+++|+||||.|..+.... ++++++++|+.++++.+ +.+++++
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 100 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL---GLDKFYL 100 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc---CCCcEEE
Confidence 368999999976554 456677777776 8999999999999998764333 78999999999999998 5667999
Q ss_pred EEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccch--hhhhc
Q 023794 81 VGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLD--SARLS 158 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 158 (277)
+||||||.+++.+|..+| ++|++++++++........ ............ ................... .....
T Consensus 101 iG~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (288)
T TIGR01250 101 LGHSWGGMLAQEYALKYG-QHLKGLIISSMLDSAPEYV-KELNRLRKELPP---EVRAAIKRCEASGDYDNPEYQEAVEV 175 (288)
T ss_pred EEeehHHHHHHHHHHhCc-cccceeeEecccccchHHH-HHHHHHHhhcCh---hHHHHHHHHHhccCcchHHHHHHHHH
Confidence 999999999999999999 9999999998754322111 111110000000 0000000000000000000 00000
Q ss_pred CccccccCCCcchhHHHHHhHH-HHHHHHH-------------HHhhhhhhhcCCCccEEEEEeCCCCCCchhhh---hh
Q 023794 159 IPSTLKYDDSKKCYVYRARLEE-TEQYWRA-------------WYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTI---GQ 221 (277)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~---~~ 221 (277)
...................... ....+.. ...+....+.++++|+++++|++|.+. +... .+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~-~~~~~~~~~ 254 (288)
T TIGR01250 176 FYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTMT-PEAAREMQE 254 (288)
T ss_pred HHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCccC-HHHHHHHHH
Confidence 0000000000000000000000 0000000 001234456789999999999999854 3333 34
Q ss_pred hcCCccEEEeCCCCCcccccChHHHHHHHHHHHH
Q 023794 222 MQGKFQMVVVRHTGHAIQEDAPEEFASLILNFIA 255 (277)
Q Consensus 222 ~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 255 (277)
..+++++++++++||+++.|+|+++++.|.+||+
T Consensus 255 ~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 255 LIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred hccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 4578899999999999999999999999999984
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=1.6e-30 Score=207.98 Aligned_cols=253 Identities=23% Similarity=0.243 Sum_probs=148.5
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcH----HHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSI----ETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~----~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
++|+|||+||++++...|...+..|.++|+|+++|+||||.|+.+.....+. +.+++++.++++.+ +.++++|
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l---~~~~~~l 180 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK---NLSNFIL 180 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc---CCCCeEE
Confidence 5689999999999999998888999889999999999999998654211122 23556677777766 6678999
Q ss_pred EEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHh--HHHHH--------HHHhhc-cchhhHHHHHHHhhcC--C
Q 023794 81 VGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASL--IHMQK--------ILSTRM-QHFSSIEKAIEWSVKG--G 147 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~--~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~--~ 147 (277)
+||||||.+++.+|.++| ++|+++|++++......... ..... .+.... ..+ ............ .
T Consensus 181 vGhS~GG~la~~~a~~~p-~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~gp~~~~ 258 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHP-EHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNF-TPQKIIRGLGPWGPN 258 (402)
T ss_pred EEECHHHHHHHHHHHhCc-hhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCC-CHHHHHHhccchhHH
Confidence 999999999999999999 99999999987643221110 00000 000000 000 000000000000 0
Q ss_pred ccccchhhhhc-Cccc--cccCCCcch--hHHHHHhH-----HHHHHHH----HHHhhhhhhhcCCCccEEEEEeCCCCC
Q 023794 148 SLRNLDSARLS-IPST--LKYDDSKKC--YVYRARLE-----ETEQYWR----AWYEGLSEKFLSCPVPKLLLLAGTDRL 213 (277)
Q Consensus 148 ~~~~~~~~~~~-~~~~--~~~~~~~~~--~~~~~~~~-----~~~~~~~----~~~~~~~~~~~~i~~P~l~i~g~~D~~ 213 (277)
........... .... ......... +.+..... ....... ....+....+.++++|+++|+|++|.+
T Consensus 259 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i 338 (402)
T PLN02894 259 LVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWM 338 (402)
T ss_pred HHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCC
Confidence 00000000000 0000 000000000 00000000 0000000 001234455688999999999999987
Q ss_pred Cchhh--hh-hhcCCccEEEeCCCCCcccccChHHHHHHHHHHHHhcCCCCC
Q 023794 214 DRPLT--IG-QMQGKFQMVVVRHTGHAIQEDAPEEFASLILNFIARNRIGPH 262 (277)
Q Consensus 214 ~~~~~--~~-~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~ 262 (277)
.+... .. ...+.+++++++++||+++.|+|++|++.|.+|++.......
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 339 NYEGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred CcHHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCc
Confidence 65332 11 222457899999999999999999999999999988766433
No 36
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.98 E-value=1.3e-30 Score=206.35 Aligned_cols=243 Identities=13% Similarity=0.116 Sum_probs=148.0
Q ss_pred CCCeEEEEccCCCCcc-----------cHHHHH----HhhhhcCeEEEEcCCC--CCCCCCC----C-------CCCCcH
Q 023794 5 EGPVIFCLHGGGYSGL-----------SFALAA----GKIKEKARVVAMDLRG--HGKSSSE----N-------DIDLSI 56 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~-----------~~~~~~----~~l~~~~~vi~~d~~G--~G~S~~~----~-------~~~~~~ 56 (277)
++++|||+||++++.. .|+.++ ..+.++|+|+++|+|| ||.|... . ...+++
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 4689999999998763 477776 3446799999999999 5655431 1 114799
Q ss_pred HHHHHHHHHHHHHHhcCCCCc-EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHH---HHHHHhhcc-
Q 023794 57 ETMCNDVLAVLKEMYGEQPPS-IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHM---QKILSTRMQ- 131 (277)
Q Consensus 57 ~~~~~d~~~~l~~l~~~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~- 131 (277)
+++++|+.++++++ +.++ ++++||||||++++.+|.++| ++|+++|++++.+.......... .........
T Consensus 110 ~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (351)
T TIGR01392 110 RDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDYP-ERVRAIVVLATSARHSAWCIAFNEVQRQAILADPNW 185 (351)
T ss_pred HHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHCh-HhhheEEEEccCCcCCHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999 6777 999999999999999999999 99999999998765433211110 111100000
Q ss_pred ---ch-----h--hH--HHHHHHhhcCCccccchhhhhcCccccccC--------CCcchhHHHH-----HhH-------
Q 023794 132 ---HF-----S--SI--EKAIEWSVKGGSLRNLDSARLSIPSTLKYD--------DSKKCYVYRA-----RLE------- 179 (277)
Q Consensus 132 ---~~-----~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~------- 179 (277)
.+ + .. ......... ................. .......+.. ...
T Consensus 186 ~~g~~~~~~~p~~~~~~~~~~~~~~~----~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 261 (351)
T TIGR01392 186 NDGDYYEDGQPDRGLALARMLAHLTY----RSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSY 261 (351)
T ss_pred CCCCCCCCCChhhHHHHHHHHHHHhc----CCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchH
Confidence 00 0 00 000000000 00000000000000000 0000000100 000
Q ss_pred -HHHHHHHHHH-----hhhhhhhcCCCccEEEEEeCCCCCCchhhhhh---hcCCccEE-----EeCCCCCcccccChHH
Q 023794 180 -ETEQYWRAWY-----EGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQ---MQGKFQMV-----VVRHTGHAIQEDAPEE 245 (277)
Q Consensus 180 -~~~~~~~~~~-----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~---~~~~~~~~-----~~~~~gH~~~~e~p~~ 245 (277)
.....+..+. .++.+.+.+|++|+|+|+|++|.+++++..++ .+++++++ +++++||++++|+|++
T Consensus 262 ~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~ 341 (351)
T TIGR01392 262 LYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQ 341 (351)
T ss_pred HHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHH
Confidence 0000111100 22456778999999999999999988776554 44676655 5678999999999999
Q ss_pred HHHHHHHHHH
Q 023794 246 FASLILNFIA 255 (277)
Q Consensus 246 ~~~~i~~fl~ 255 (277)
|++.|.+||+
T Consensus 342 ~~~~l~~FL~ 351 (351)
T TIGR01392 342 VEELIRGFLR 351 (351)
T ss_pred HHHHHHHHhC
Confidence 9999999984
No 37
>PRK10749 lysophospholipase L2; Provisional
Probab=99.98 E-value=2.4e-31 Score=208.58 Aligned_cols=243 Identities=15% Similarity=0.098 Sum_probs=149.5
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhh-hcCeEEEEcCCCCCCCCCCCC-----CCCcHHHHHHHHHHHHHHHhcC-CCCc
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIK-EKARVVAMDLRGHGKSSSEND-----IDLSIETMCNDVLAVLKEMYGE-QPPS 77 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~~-----~~~~~~~~~~d~~~~l~~l~~~-~~~~ 77 (277)
.+++||++||++.+...|..++..+. .||+|+++|+||||.|+.... ..++++++++|+.++++.+... +..+
T Consensus 53 ~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 132 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRK 132 (330)
T ss_pred CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCC
Confidence 46789999999999888999887775 499999999999999975421 1358999999999999987432 3468
Q ss_pred EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCC-c-cccchhh
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGG-S-LRNLDSA 155 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 155 (277)
++++||||||.+++.+|..+| +.++++|+++|................... ........... . .......
T Consensus 133 ~~l~GhSmGG~ia~~~a~~~p-~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 204 (330)
T PRK10749 133 RYALAHSMGGAILTLFLQRHP-GVFDAIALCAPMFGIVLPLPSWMARRILNW-------AEGHPRIRDGYAIGTGRWRPL 204 (330)
T ss_pred eEEEEEcHHHHHHHHHHHhCC-CCcceEEEECchhccCCCCCcHHHHHHHHH-------HHHhcCCCCcCCCCCCCCCCC
Confidence 999999999999999999999 999999999886432211100000000000 00000000000 0 0000000
Q ss_pred hhcCccccccCCCcch---hHHHHH---------hHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc
Q 023794 156 RLSIPSTLKYDDSKKC---YVYRAR---------LEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ 223 (277)
Q Consensus 156 ~~~~~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 223 (277)
. .....+........ ..+... ........ .....+...+.++++|+|+|+|++|.+++.+....+.
T Consensus 205 ~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~ 282 (330)
T PRK10749 205 P-FAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESI-LAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFC 282 (330)
T ss_pred C-cCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHH-HHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHH
Confidence 0 00000000000000 000000 00000000 0011233456789999999999999998876544332
Q ss_pred ----------CCccEEEeCCCCCcccccCh---HHHHHHHHHHHHhc
Q 023794 224 ----------GKFQMVVVRHTGHAIQEDAP---EEFASLILNFIARN 257 (277)
Q Consensus 224 ----------~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~~ 257 (277)
+++++++++++||.++.|.+ +.+.+.|.+||+++
T Consensus 283 ~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 283 EARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 34589999999999999986 66889999999764
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=1.7e-30 Score=236.56 Aligned_cols=239 Identities=22% Similarity=0.339 Sum_probs=156.4
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCC-------CCCCcHHHHHHHHHHHHHHHhcCCCCc
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSEN-------DIDLSIETMCNDVLAVLKEMYGEQPPS 77 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~-------~~~~~~~~~~~d~~~~l~~l~~~~~~~ 77 (277)
++++|||+||++++...|..+...|.++|+|+++|+||||.|+... ...++++++++++.++++++ +.++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---~~~~ 1446 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---TPGK 1446 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---CCCC
Confidence 4689999999999999999999999889999999999999997543 12578999999999999998 6678
Q ss_pred EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHh-hccch--hhHHHHHHHhhcCCccccchh
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILST-RMQHF--SSIEKAIEWSVKGGSLRNLDS 154 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~ 154 (277)
++|+||||||.+++.++.++| ++|+++|++++.+................ ..... ..........+........
T Consensus 1447 v~LvGhSmGG~iAl~~A~~~P-~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-- 1523 (1655)
T PLN02980 1447 VTLVGYSMGARIALYMALRFS-DKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSL-- 1523 (1655)
T ss_pred EEEEEECHHHHHHHHHHHhCh-HhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhh--
Confidence 999999999999999999999 99999999987654322111111000000 00000 0000011100000000000
Q ss_pred hhhcCccccccCCCcchhHHHH-----HhHHHHHHHHHH----HhhhhhhhcCCCccEEEEEeCCCCCCch--hhhhhhc
Q 023794 155 ARLSIPSTLKYDDSKKCYVYRA-----RLEETEQYWRAW----YEGLSEKFLSCPVPKLLLLAGTDRLDRP--LTIGQMQ 223 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~~i~~P~l~i~g~~D~~~~~--~~~~~~~ 223 (277)
.... ........ ........+... ..++.+.+.++++|+|+|+|++|.+.+. ..+.+..
T Consensus 1524 ---------~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~~a~~~~~~i 1593 (1655)
T PLN02980 1524 ---------RNHP-HFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQIAQKMYREI 1593 (1655)
T ss_pred ---------ccCH-HHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHHHHHHHHHHc
Confidence 0000 00000000 000011111111 1234466789999999999999987642 2233333
Q ss_pred CC------------ccEEEeCCCCCcccccChHHHHHHHHHHHHhcCC
Q 023794 224 GK------------FQMVVVRHTGHAIQEDAPEEFASLILNFIARNRI 259 (277)
Q Consensus 224 ~~------------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 259 (277)
++ +++++++++||++++|+|+++++.|.+||++...
T Consensus 1594 ~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1594 GKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred cccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccc
Confidence 33 5899999999999999999999999999998664
No 39
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=1.6e-29 Score=200.48 Aligned_cols=242 Identities=20% Similarity=0.233 Sum_probs=154.3
Q ss_pred CCCCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-CCcEEE
Q 023794 3 GTEGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQ-PPSIVL 80 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~~l 80 (277)
++.+++|||+||++++...|..++..|.+ +|+|+++|+||||.|+.......+++.+++|+.++++.+.... ..++++
T Consensus 133 ~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~l 212 (395)
T PLN02652 133 GEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFL 212 (395)
T ss_pred CCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 34457899999999998899999999975 9999999999999998765545688999999999999986432 247999
Q ss_pred EEeChhHHHHHHHHHHhcc--cccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhh--h
Q 023794 81 VGHSMGGSVAVHVAAKKTL--RSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSA--R 156 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 156 (277)
+||||||.+++.++. +|+ ++++++|+.+|......... ...... ...........+...... .
T Consensus 213 vGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~--~~~~~~----------~l~~~~~p~~~~~~~~~~~~~ 279 (395)
T PLN02652 213 FGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP--IVGAVA----------PIFSLVAPRFQFKGANKRGIP 279 (395)
T ss_pred EEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH--HHHHHH----------HHHHHhCCCCcccCcccccCC
Confidence 999999999998774 552 37999999988643221110 000000 000000000000000000 0
Q ss_pred hc-Cccc--cccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc-----CCccE
Q 023794 157 LS-IPST--LKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ-----GKFQM 228 (277)
Q Consensus 157 ~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-----~~~~~ 228 (277)
.. .+.. ..+........... ....... ......+...+.++++|+|+++|++|.+++.+..++++ ++.++
T Consensus 280 ~s~~~~~~~~~~~dp~~~~g~i~-~~~~~~~-~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l 357 (395)
T PLN02652 280 VSRDPAALLAKYSDPLVYTGPIR-VRTGHEI-LRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDI 357 (395)
T ss_pred cCCCHHHHHHHhcCCCcccCCch-HHHHHHH-HHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceE
Confidence 00 0000 00000000000000 0000000 01112234566889999999999999999988777663 24689
Q ss_pred EEeCCCCCccccc-ChHHHHHHHHHHHHhcCC
Q 023794 229 VVVRHTGHAIQED-APEEFASLILNFIARNRI 259 (277)
Q Consensus 229 ~~~~~~gH~~~~e-~p~~~~~~i~~fl~~~~~ 259 (277)
+++++++|.++.| +++++.+.+.+||+....
T Consensus 358 ~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 358 KLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred EEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 9999999999887 789999999999987653
No 40
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=8.1e-29 Score=172.08 Aligned_cols=221 Identities=15% Similarity=0.179 Sum_probs=158.9
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGH 83 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~ 83 (277)
++..|||+||+.++....+.+.+.|.+ ||+|.++.+||||.....- ...+.+++.+++.+..+.|...+.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f-l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF-LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH-hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 448999999999999999999999987 9999999999999765322 25789999999999999998667889999999
Q ss_pred ChhHHHHHHHHHHhcccccceEEEEccCCCcchHHh--HHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCcc
Q 023794 84 SMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASL--IHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPS 161 (277)
Q Consensus 84 S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
||||.+|+.+|..+| ++++|.++++........ ......+.. .... ... +.....
T Consensus 93 SmGGv~alkla~~~p---~K~iv~m~a~~~~k~~~~iie~~l~y~~~-----------~kk~-e~k---~~e~~~----- 149 (243)
T COG1647 93 SMGGVFALKLAYHYP---PKKIVPMCAPVNVKSWRIIIEGLLEYFRN-----------AKKY-EGK---DQEQID----- 149 (243)
T ss_pred cchhHHHHHHHhhCC---ccceeeecCCcccccchhhhHHHHHHHHH-----------hhhc-cCC---CHHHHH-----
Confidence 999999999999998 899999998765332221 111111100 0000 000 000000
Q ss_pred ccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcC-----CccEEEeCCCCC
Q 023794 162 TLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQG-----KFQMVVVRHTGH 236 (277)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~-----~~~~~~~~~~gH 236 (277)
.....+..........+.....+....+..|..|++++.|++|++++.+.+..++. .-++.+++++||
T Consensus 150 -------~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgH 222 (243)
T COG1647 150 -------KEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGH 222 (243)
T ss_pred -------HHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCc
Confidence 00000111111222223344556677788999999999999999999998887763 348999999999
Q ss_pred cccccC-hHHHHHHHHHHHHh
Q 023794 237 AIQEDA-PEEFASLILNFIAR 256 (277)
Q Consensus 237 ~~~~e~-p~~~~~~i~~fl~~ 256 (277)
....+. .+.+.+.+..||++
T Consensus 223 VIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 223 VITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred eeecchhHHHHHHHHHHHhhC
Confidence 998775 48899999999963
No 41
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.97 E-value=1.8e-28 Score=181.84 Aligned_cols=246 Identities=22% Similarity=0.284 Sum_probs=165.8
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEE
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVL 80 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~l 80 (277)
...|+++++||+.++...|+.+...|++ +..|+++|.|.||.|.... ..+.+++++|+..+++..++. ...++++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~--~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT--VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc--ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 3679999999999999999999999987 7899999999999998765 467999999999999998643 3457999
Q ss_pred EEeChhH-HHHHHHHHHhcccccceEEEEccCCCcchHHhHH---HHHHHHhhccc---hhhHHHHHHHhhc---CCccc
Q 023794 81 VGHSMGG-SVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIH---MQKILSTRMQH---FSSIEKAIEWSVK---GGSLR 150 (277)
Q Consensus 81 vG~S~Gg-~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~ 150 (277)
+|||||| .+++..+..+| +.+..+|+++.++......... ....+...... ..........+.. .....
T Consensus 128 ~GHsmGG~~~~m~~t~~~p-~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~ 206 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKP-DLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVR 206 (315)
T ss_pred cccCcchHHHHHHHHHhcC-cccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHH
Confidence 9999999 77888888899 8999999999877422211111 11111111111 1111122221111 11111
Q ss_pred cchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHH-Hhhhhhhh--cCCCccEEEEEeCCCCCCchh---hhhhhcC
Q 023794 151 NLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAW-YEGLSEKF--LSCPVPKLLLLAGTDRLDRPL---TIGQMQG 224 (277)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~---~~~~~~~ 224 (277)
.+.... +..........+........+.+..+ ...+...+ .....||+++.|.++.+++.+ .+++++|
T Consensus 207 ~fi~~n------l~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp 280 (315)
T KOG2382|consen 207 QFILTN------LKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP 280 (315)
T ss_pred HHHHHh------cCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc
Confidence 111110 00011122222333333333333321 11122222 667889999999999988876 4566779
Q ss_pred CccEEEeCCCCCcccccChHHHHHHHHHHHHhcC
Q 023794 225 KFQMVVVRHTGHAIQEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 225 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 258 (277)
+++++.++++||++|.|+|++|.+.|.+|+.+..
T Consensus 281 ~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 281 NVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred chheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 9999999999999999999999999999998754
No 42
>PLN02511 hydrolase
Probab=99.96 E-value=7.6e-29 Score=197.57 Aligned_cols=242 Identities=16% Similarity=0.229 Sum_probs=146.5
Q ss_pred CCCCeEEEEccCCCCccc-H-HHHHHh-hhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-CCcEE
Q 023794 4 TEGPVIFCLHGGGYSGLS-F-ALAAGK-IKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQ-PPSIV 79 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~-~-~~~~~~-l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~~ 79 (277)
.++|+||++||++++... | ..++.. +.+||+|+++|+||||.|..... .+.....++|+.++++++.... ..+++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~-~~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP-QFYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc-CEEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 457899999999776543 4 455554 45699999999999999976543 3334677889999999986432 24799
Q ss_pred EEEeChhHHHHHHHHHHhcccc--cceEEEEccCCCcchHHhHHHHHHHHhhc-cchh-hHHHHHH---HhhcCCccccc
Q 023794 80 LVGHSMGGSVAVHVAAKKTLRS--LHGLVVVDVVEGTAMASLIHMQKILSTRM-QHFS-SIEKAIE---WSVKGGSLRNL 152 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~p~~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~---~~~~~~~~~~~ 152 (277)
++||||||.+++.++.++| ++ |.++++++++....... ..+...+.... ..+. .+..... ..+... ....
T Consensus 177 lvG~SlGg~i~~~yl~~~~-~~~~v~~~v~is~p~~l~~~~-~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~-~~~~ 253 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEG-ENCPLSGAVSLCNPFDLVIAD-EDFHKGFNNVYDKALAKALRKIFAKHALLFEGL-GGEY 253 (388)
T ss_pred EEEechhHHHHHHHHHhcC-CCCCceEEEEECCCcCHHHHH-HHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCcc
Confidence 9999999999999999998 66 88888887654321111 00100000000 0000 0000000 000000 0000
Q ss_pred hhhhhcCccccccCCCcchhHHHHH-------hHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhh----hh
Q 023794 153 DSARLSIPSTLKYDDSKKCYVYRAR-------LEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTI----GQ 221 (277)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~----~~ 221 (277)
...... .......+... ......++. ..+....+.+|++|+|+|+|++|++++.... .+
T Consensus 254 ~~~~~~--------~~~~~~~fd~~~t~~~~gf~~~~~yy~--~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~ 323 (388)
T PLN02511 254 NIPLVA--------NAKTVRDFDDGLTRVSFGFKSVDAYYS--NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIK 323 (388)
T ss_pred CHHHHH--------hCCCHHHHHHhhhhhcCCCCCHHHHHH--HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHh
Confidence 000000 00000000000 011111111 1223456789999999999999998876543 34
Q ss_pred hcCCccEEEeCCCCCcccccChHH------HHHHHHHHHHhcCC
Q 023794 222 MQGKFQMVVVRHTGHAIQEDAPEE------FASLILNFIARNRI 259 (277)
Q Consensus 222 ~~~~~~~~~~~~~gH~~~~e~p~~------~~~~i~~fl~~~~~ 259 (277)
..+++++++++++||+.++|+|+. +.+.+.+||+....
T Consensus 324 ~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 324 ANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred cCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 568999999999999999999864 58999999987653
No 43
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=2.2e-28 Score=178.54 Aligned_cols=241 Identities=18% Similarity=0.271 Sum_probs=160.6
Q ss_pred CCCeEEEEccCCCCc-ccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC---CCCcEE
Q 023794 5 EGPVIFCLHGGGYSG-LSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE---QPPSIV 79 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~-~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~ 79 (277)
..-.|+++||++... ..|..++..|+. ||.|+++|++|||.|++.....-+++..++|+..+++....+ ...+..
T Consensus 53 pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~F 132 (313)
T KOG1455|consen 53 PRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRF 132 (313)
T ss_pred CceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCee
Confidence 345799999988765 778889999987 999999999999999988777779999999999999976433 234889
Q ss_pred EEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchH-----HhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchh
Q 023794 80 LVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMA-----SLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDS 154 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
|+||||||+|++.++.++| +...++|+++|....... ....+...+....+.+..... ........+....
T Consensus 133 L~GeSMGGAV~Ll~~~k~p-~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~---~d~~~~~~kdp~~ 208 (313)
T KOG1455|consen 133 LFGESMGGAVALLIALKDP-NFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPT---KDIIDVAFKDPEK 208 (313)
T ss_pred eeecCcchHHHHHHHhhCC-cccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCC---ccccccccCCHHH
Confidence 9999999999999999999 999999999987543221 111222222222211110000 0000001111111
Q ss_pred hhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcC-----CccEE
Q 023794 155 ARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQG-----KFQMV 229 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~-----~~~~~ 229 (277)
..........+............+ ....++...+.++++|.+++||+.|.++++...+.++. +.++.
T Consensus 209 r~~~~~npl~y~g~pRl~T~~ElL--------r~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlK 280 (313)
T KOG1455|consen 209 RKILRSDPLCYTGKPRLKTAYELL--------RVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLK 280 (313)
T ss_pred HHHhhcCCceecCCccHHHHHHHH--------HHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCcee
Confidence 111111111222111111111111 11346777889999999999999999999988887774 34899
Q ss_pred EeCCCCCcccc-c---ChHHHHHHHHHHHHhc
Q 023794 230 VVRHTGHAIQE-D---APEEFASLILNFIARN 257 (277)
Q Consensus 230 ~~~~~gH~~~~-e---~p~~~~~~i~~fl~~~ 257 (277)
.+||.-|.++. | +-+.|...|.+||++.
T Consensus 281 lYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 281 LYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999986 3 2266788889999864
No 44
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.96 E-value=4.2e-28 Score=185.49 Aligned_cols=239 Identities=22% Similarity=0.230 Sum_probs=155.1
Q ss_pred CeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCC-CCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEEEEe
Q 023794 7 PVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSS-SENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVLVGH 83 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~-~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~lvG~ 83 (277)
.+||++||++.+..-|..++..|.. ||.|+++|+||||.|. ...+...+++++.+|+..+++..... ...+++++||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 6899999999999999999999876 9999999999999998 55544567999999999999998642 3468999999
Q ss_pred ChhHHHHHHHHHHhcccccceEEEEccCCCcch--HHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCcc
Q 023794 84 SMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAM--ASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPS 161 (277)
Q Consensus 84 S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
||||.|++.++.+++ ..|+++||.+|...... .............. .......... .........
T Consensus 115 SmGg~Ia~~~~~~~~-~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~-----------~~~p~~~~~~-~~~~~~~~~ 181 (298)
T COG2267 115 SMGGLIALLYLARYP-PRIDGLVLSSPALGLGGAILRLILARLALKLLG-----------RIRPKLPVDS-NLLEGVLTD 181 (298)
T ss_pred CcHHHHHHHHHHhCC-ccccEEEEECccccCChhHHHHHHHHHhccccc-----------ccccccccCc-ccccCcCcc
Confidence 999999999999999 99999999999876553 11100000000000 0000000000 000000000
Q ss_pred ccccCCCcchhHHHHH--------hHHH-HHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCc-hhhhhhhc-----CCc
Q 023794 162 TLKYDDSKKCYVYRAR--------LEET-EQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDR-PLTIGQMQ-----GKF 226 (277)
Q Consensus 162 ~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~-~~~~~~~~-----~~~ 226 (277)
....+. .....+... .... .................+.+|+|+++|++|.+++ .+...++. ++.
T Consensus 182 ~~sr~~-~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~ 260 (298)
T COG2267 182 DLSRDP-AEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDK 260 (298)
T ss_pred hhhcCH-HHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCc
Confidence 000000 000000000 0000 0000000011223346789999999999999988 56666443 667
Q ss_pred cEEEeCCCCCcccccCh---HHHHHHHHHHHHhcCC
Q 023794 227 QMVVVRHTGHAIQEDAP---EEFASLILNFIARNRI 259 (277)
Q Consensus 227 ~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~~~~ 259 (277)
++++++++.|..+.|.+ +++.+.+.+|+.+...
T Consensus 261 ~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 261 ELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred eEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 89999999999998854 7899999999988654
No 45
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.96 E-value=7.4e-28 Score=187.32 Aligned_cols=104 Identities=24% Similarity=0.311 Sum_probs=86.5
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhh-hhcCeEEEEcCCCCCCCCCCCC-CCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKI-KEKARVVAMDLRGHGKSSSEND-IDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l-~~~~~vi~~d~~G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
++++|||+||++++...+ .+...+ .++|+|+++|+||||.|+.... ..++.+++++|+..+++++ +.++++++|
T Consensus 26 ~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l---~~~~~~lvG 101 (306)
T TIGR01249 26 DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL---GIKNWLVFG 101 (306)
T ss_pred CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 367899999988776654 333344 3589999999999999986542 2467889999999999998 667899999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
|||||.+++.++.++| ++|+++|++++...
T Consensus 102 ~S~GG~ia~~~a~~~p-~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 102 GSWGSTLALAYAQTHP-EVVTGLVLRGIFLL 131 (306)
T ss_pred ECHHHHHHHHHHHHCh-HhhhhheeeccccC
Confidence 9999999999999999 99999999987643
No 46
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=1.5e-27 Score=202.11 Aligned_cols=248 Identities=16% Similarity=0.210 Sum_probs=144.7
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCC-CCCcHHHHHHHHHHHHHHHhcCCCC-cEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSEND-IDLSIETMCNDVLAVLKEMYGEQPP-SIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~-~~~lvG 82 (277)
++|+|||+||++++...|..+.+.|.++|+|+++|+||||.|+.+.. ..++++++++|+.++++.+ +.. +++|+|
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l---~~~~~~~lvG 100 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV---SPDRPVHLLA 100 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh---CCCCcEEEEe
Confidence 47899999999999999999999998899999999999999986542 3689999999999999998 443 499999
Q ss_pred eChhHHHHHHHHHH--hcccccceEEEEccCCCcchHHhHHHHHHHHh-hccchhh-HHHHHH----HhhcCCccccc--
Q 023794 83 HSMGGSVAVHVAAK--KTLRSLHGLVVVDVVEGTAMASLIHMQKILST-RMQHFSS-IEKAIE----WSVKGGSLRNL-- 152 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~--~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~----~~~~~~~~~~~-- 152 (277)
|||||.+++.++.+ .+ +++..++.++++....... ........ ....... ...... ...........
T Consensus 101 hS~Gg~~a~~~a~~~~~~-~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (582)
T PRK05855 101 HDWGSIQGWEAVTRPRAA-GRIASFTSVSGPSLDHVGF--WLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLW 177 (582)
T ss_pred cChHHHHHHHHHhCccch-hhhhhheeccCCchHHHHH--HHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHh
Confidence 99999999988876 23 4555555554322110000 00000000 0000000 000000 00000000000
Q ss_pred ----hhhhhcCccccccCCCcchhHHH--HHhHHHHHHHHH-HH-hhhhhhhcCCCccEEEEEeCCCCCCchhhhhhh--
Q 023794 153 ----DSARLSIPSTLKYDDSKKCYVYR--ARLEETEQYWRA-WY-EGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQM-- 222 (277)
Q Consensus 153 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~-- 222 (277)
....................... .........+.. .. ......+..+++|+++|+|++|.+++......+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~ 257 (582)
T PRK05855 178 RLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSR 257 (582)
T ss_pred ccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhccccc
Confidence 00000000000000000000000 000000000000 00 011122355899999999999999887765544
Q ss_pred -cCCccEEEeCCCCCcccccChHHHHHHHHHHHHhcCC
Q 023794 223 -QGKFQMVVVRHTGHAIQEDAPEEFASLILNFIARNRI 259 (277)
Q Consensus 223 -~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 259 (277)
.++.++++++ +||++++|+|+++.+.|.+|++....
T Consensus 258 ~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 258 WVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred cCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhccC
Confidence 4667888886 79999999999999999999988653
No 47
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.95 E-value=9e-27 Score=159.36 Aligned_cols=229 Identities=17% Similarity=0.262 Sum_probs=152.8
Q ss_pred CCCCCCeEEEEccC-CCCcccHHHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHH---HHHHHHHHHHHhcCCC
Q 023794 2 AGTEGPVIFCLHGG-GYSGLSFALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETM---CNDVLAVLKEMYGEQP 75 (277)
Q Consensus 2 ~g~~~p~vv~~HG~-~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~---~~d~~~~l~~l~~~~~ 75 (277)
+|.+...|++++|. |+....|.++...|.+ .++|+++|.||||.|.++.. .+..+.+ +++..++++.| +.
T Consensus 38 ~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R-kf~~~ff~~Da~~avdLM~aL---k~ 113 (277)
T KOG2984|consen 38 YGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER-KFEVQFFMKDAEYAVDLMEAL---KL 113 (277)
T ss_pred cCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc-cchHHHHHHhHHHHHHHHHHh---CC
Confidence 46566789999994 6667789988877755 59999999999999987763 4444444 55566777777 78
Q ss_pred CcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhh
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSA 155 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
+++.++|+|-||..|+..|++++ +.|..+++.++............ ........|.....
T Consensus 114 ~~fsvlGWSdGgiTalivAak~~-e~v~rmiiwga~ayvn~~~~ma~-----------kgiRdv~kWs~r~R-------- 173 (277)
T KOG2984|consen 114 EPFSVLGWSDGGITALIVAAKGK-EKVNRMIIWGAAAYVNHLGAMAF-----------KGIRDVNKWSARGR-------- 173 (277)
T ss_pred CCeeEeeecCCCeEEEEeeccCh-hhhhhheeecccceecchhHHHH-----------hchHHHhhhhhhhc--------
Confidence 89999999999999999999999 99999999987643322111110 00111111110000
Q ss_pred hhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhh-hhhhhcCCCccEEEEEeCCCCCCchhh---hhhhcCCccEEEe
Q 023794 156 RLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEG-LSEKFLSCPVPKLLLLAGTDRLDRPLT---IGQMQGKFQMVVV 231 (277)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~P~l~i~g~~D~~~~~~~---~~~~~~~~~~~~~ 231 (277)
.+....|........+....+...+.......+ -...+.+++||+|+++|++|++++... +....+.+++.++
T Consensus 174 ---~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~ 250 (277)
T KOG2984|consen 174 ---QPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIH 250 (277)
T ss_pred ---chHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEc
Confidence 000011111111112222222222211111111 234568999999999999999977554 4556688899999
Q ss_pred CCCCCcccccChHHHHHHHHHHHHhc
Q 023794 232 RHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 232 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
|.++|.+++..+++|+..+.+||++.
T Consensus 251 peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 251 PEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred cCCCcceeeechHHHHHHHHHHHhcc
Confidence 99999999999999999999999875
No 48
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=2.7e-25 Score=175.81 Aligned_cols=248 Identities=13% Similarity=0.088 Sum_probs=146.8
Q ss_pred CCCeEEEEccCCCCcc-------------cHHHHHH---hhh-hcCeEEEEcCCCCCCCCCC-----------C------
Q 023794 5 EGPVIFCLHGGGYSGL-------------SFALAAG---KIK-EKARVVAMDLRGHGKSSSE-----------N------ 50 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~-------------~~~~~~~---~l~-~~~~vi~~d~~G~G~S~~~-----------~------ 50 (277)
...+||++|+++++.. .|..++- .|. +.|.||++|..|-|.|..+ +
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~ 134 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPY 134 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCcc
Confidence 3578999999987542 2665553 233 4799999999997653211 1
Q ss_pred ---CCCCcHHHHHHHHHHHHHHHhcCCCCcEE-EEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHH-hHH---H
Q 023794 51 ---DIDLSIETMCNDVLAVLKEMYGEQPPSIV-LVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMAS-LIH---M 122 (277)
Q Consensus 51 ---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~-~~~---~ 122 (277)
-..++++++++++.++++++ +.++++ ++||||||++++.+|.++| ++|+++|++++........ ... .
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG~ial~~a~~~P-~~v~~lv~ia~~~~~~~~~~~~~~~~~ 210 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSL---GIARLHAVMGPSMGGMQAQEWAVHYP-HMVERMIGVIGNPQNDAWTSVNVLQNW 210 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHCh-HhhheEEEEecCCCCChhHHHHHHHHH
Confidence 11379999999999999998 777786 9999999999999999999 9999999998876543322 111 1
Q ss_pred HHHHHhhcc----ch-------hhHHHHHHHhhcCCccccchhhhhcCccccccC------CCcchhHHHHH--------
Q 023794 123 QKILSTRMQ----HF-------SSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYD------DSKKCYVYRAR-------- 177 (277)
Q Consensus 123 ~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-------- 177 (277)
...+..-.. .+ ..+................-............. .......+...
T Consensus 211 ~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~ 290 (389)
T PRK06765 211 AEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAEL 290 (389)
T ss_pred HHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhc
Confidence 111101000 00 001111000000000000000000000000000 00000000000
Q ss_pred h--HHHHHHHHHH--------HhhhhhhhcCCCccEEEEEeCCCCCCchhhhhh---hcC----CccEEEeCC-CCCccc
Q 023794 178 L--EETEQYWRAW--------YEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQ---MQG----KFQMVVVRH-TGHAIQ 239 (277)
Q Consensus 178 ~--~~~~~~~~~~--------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~---~~~----~~~~~~~~~-~gH~~~ 239 (277)
. .........+ ..++.+.+.++++|+|+|+|++|.+++++..++ ..+ +++++++++ +||+++
T Consensus 291 ~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~ 370 (389)
T PRK06765 291 VDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAG 370 (389)
T ss_pred cChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchh
Confidence 0 0000000000 114566778999999999999999988765443 333 688999986 899999
Q ss_pred ccChHHHHHHHHHHHHh
Q 023794 240 EDAPEEFASLILNFIAR 256 (277)
Q Consensus 240 ~e~p~~~~~~i~~fl~~ 256 (277)
+|+|+++++.|.+||++
T Consensus 371 le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 371 VFDIHLFEKKIYEFLNR 387 (389)
T ss_pred hcCHHHHHHHHHHHHcc
Confidence 99999999999999975
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.94 E-value=4.6e-25 Score=168.50 Aligned_cols=231 Identities=20% Similarity=0.225 Sum_probs=139.3
Q ss_pred CCCeEEEEccCCC----CcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC--CCCc
Q 023794 5 EGPVIFCLHGGGY----SGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE--QPPS 77 (277)
Q Consensus 5 ~~p~vv~~HG~~~----~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~ 77 (277)
+++.||++||++. +...|..+++.|.+ ||+|+++|+||||.|... ..+++++.+|+.++++.+... +.++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~---~~~~~~~~~d~~~~~~~l~~~~~g~~~ 101 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE---NLGFEGIDADIAAAIDAFREAAPHLRR 101 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 4578888898653 33446677888876 899999999999998753 247788889999999988643 3467
Q ss_pred EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHH-HHHHHHhhccchhhHHHHHHHhhcCCccccchhhh
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIH-MQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSAR 156 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (277)
++++||||||.+++.+|.. + .+|+++|++++........... ........... ........... . .+....
T Consensus 102 i~l~G~S~Gg~~a~~~a~~-~-~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~-~-~~~~~~ 173 (274)
T TIGR03100 102 IVAWGLCDAASAALLYAPA-D-LRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLS----ADFWRKLLSGE-V-NLGSSL 173 (274)
T ss_pred EEEEEECHHHHHHHHHhhh-C-CCccEEEEECCccCCcccchHHHHHHHHHHHHhC----hHHHHHhcCCC-c-cHHHHH
Confidence 9999999999999999865 4 6899999999864322211111 11111000000 01111111110 0 000000
Q ss_pred hcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchh--------hhhhhc--CCc
Q 023794 157 LSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPL--------TIGQMQ--GKF 226 (277)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~--------~~~~~~--~~~ 226 (277)
........ .+. ... ..........++...+..+++|+++++|+.|...+.. ...+.. +++
T Consensus 174 ~~~~~~~~--------~~~-~~~-~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v 243 (274)
T TIGR03100 174 RGLGDALL--------KAR-QKG-DEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGI 243 (274)
T ss_pred HHHHHHHH--------hhh-hcC-CCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCe
Confidence 00000000 000 000 0000000123344556678999999999999865321 112222 788
Q ss_pred cEEEeCCCCCcccccCh-HHHHHHHHHHHHh
Q 023794 227 QMVVVRHTGHAIQEDAP-EEFASLILNFIAR 256 (277)
Q Consensus 227 ~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~~ 256 (277)
+++.+++++|++..+.+ +++.+.|.+||++
T Consensus 244 ~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 244 ERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 99999999999966655 9999999999963
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=2.7e-25 Score=173.97 Aligned_cols=248 Identities=17% Similarity=0.129 Sum_probs=139.6
Q ss_pred CCCeEEEEccCCCCccc--HHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEE
Q 023794 5 EGPVIFCLHGGGYSGLS--FALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVL 80 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~l 80 (277)
.+|+||++||++++... +..++..|.+ ||+|+++|+||||.+.......+.. ...+|+..+++.+... +..++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~-~~~~D~~~~i~~l~~~~~~~~~~~ 135 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHS-GETEDARFFLRWLQREFGHVPTAA 135 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECC-CchHHHHHHHHHHHHhCCCCCEEE
Confidence 46899999999876544 4567777766 9999999999999775432212222 2346666666655432 4467999
Q ss_pred EEeChhHHHHHHHHHHhccc-ccceEEEEccCCCcchHHhHHHHHHHHhhccc--hhhHHHHHHHhhcC-Cccccchhhh
Q 023794 81 VGHSMGGSVAVHVAAKKTLR-SLHGLVVVDVVEGTAMASLIHMQKILSTRMQH--FSSIEKAIEWSVKG-GSLRNLDSAR 156 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~ 156 (277)
+||||||.++..++.+++.+ .+.++|+++++........ ............ ...+.......... ..........
T Consensus 136 vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 214 (324)
T PRK10985 136 VGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY-RMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQ 214 (324)
T ss_pred EEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHH
Confidence 99999999999888887623 3899999988654322111 111111100000 00000000000000 0000000000
Q ss_pred hcCcccc-ccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhh---hhhcCCccEEEeC
Q 023794 157 LSIPSTL-KYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTI---GQMQGKFQMVVVR 232 (277)
Q Consensus 157 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~---~~~~~~~~~~~~~ 232 (277)
......+ .++... ............++.. .+....+.++++|+++|+|++|++++.+.. .+..+++++++++
T Consensus 215 ~~~~~~~~~fd~~~--~~~~~g~~~~~~~y~~--~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 290 (324)
T PRK10985 215 LKSVRRLREFDDLI--TARIHGFADAIDYYRQ--CSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTE 290 (324)
T ss_pred HhcCCcHHHHhhhh--eeccCCCCCHHHHHHH--CChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECC
Confidence 0000000 000000 0000011111222221 223456689999999999999998776543 3455788999999
Q ss_pred CCCCcccccCh-----HHHHHHHHHHHHhcC
Q 023794 233 HTGHAIQEDAP-----EEFASLILNFIARNR 258 (277)
Q Consensus 233 ~~gH~~~~e~p-----~~~~~~i~~fl~~~~ 258 (277)
++||+.++|.. .+.-+.+.+|++...
T Consensus 291 ~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 291 HGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred CCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 99999999852 577888888987643
No 51
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.94 E-value=6.2e-25 Score=171.88 Aligned_cols=233 Identities=14% Similarity=0.156 Sum_probs=140.8
Q ss_pred CCCeEEEEccCCCCccc-H-------------------------HHHHHhhhh-cCeEEEEcCCCCCCCCCCC---CCCC
Q 023794 5 EGPVIFCLHGGGYSGLS-F-------------------------ALAAGKIKE-KARVVAMDLRGHGKSSSEN---DIDL 54 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~-~-------------------------~~~~~~l~~-~~~vi~~d~~G~G~S~~~~---~~~~ 54 (277)
.+.+|+++||++.+... + ..+++.|.+ ||.|+++|+||||.|+... ....
T Consensus 20 ~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~ 99 (332)
T TIGR01607 20 AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHIN 99 (332)
T ss_pred CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchh
Confidence 35689999999887751 1 467888866 9999999999999998642 1124
Q ss_pred cHHHHHHHHHHHHHHHhc-------------------CC--CCcEEEEEeChhHHHHHHHHHHhcc-------cccceEE
Q 023794 55 SIETMCNDVLAVLKEMYG-------------------EQ--PPSIVLVGHSMGGSVAVHVAAKKTL-------RSLHGLV 106 (277)
Q Consensus 55 ~~~~~~~d~~~~l~~l~~-------------------~~--~~~~~lvG~S~Gg~ia~~~a~~~p~-------~~v~~lv 106 (277)
+++++++|+.++++.+.. .. ..+++|+||||||.+++.++..++. ..++++|
T Consensus 100 ~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i 179 (332)
T TIGR01607 100 CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCI 179 (332)
T ss_pred hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEE
Confidence 899999999999987643 11 2479999999999999999987641 1589999
Q ss_pred EEccCCCcchH------HhHHHHHHHHhhccchhhHHHHHHHhhcCCc------cccchhhhhcC-ccccccCCCcchhH
Q 023794 107 VVDVVEGTAMA------SLIHMQKILSTRMQHFSSIEKAIEWSVKGGS------LRNLDSARLSI-PSTLKYDDSKKCYV 173 (277)
Q Consensus 107 l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~ 173 (277)
++++....... ........+. ..+........ ........... .....+........
T Consensus 180 ~~s~~~~i~~~~~~~~~~~~~~~~~l~----------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~ 249 (332)
T TIGR01607 180 SLSGMISIKSVGSDDSFKFKYFYLPVM----------NFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGGITFNL 249 (332)
T ss_pred EeccceEEecccCCCcchhhhhHHHHH----------HHHHHHCCcccccCccccccChhhhhHHhcCccccCCcccHHH
Confidence 88876422110 0000000000 00001100000 00000000000 00000000000000
Q ss_pred HHHHhHHHHHHHHHHHhhhhhhhcCC--CccEEEEEeCCCCCCchhhhhhhc-----CCccEEEeCCCCCcccccC-hHH
Q 023794 174 YRARLEETEQYWRAWYEGLSEKFLSC--PVPKLLLLAGTDRLDRPLTIGQMQ-----GKFQMVVVRHTGHAIQEDA-PEE 245 (277)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~e~-p~~ 245 (277)
....... ...+...+..+ ++|+|+|+|++|.+++.+....+. ++.+++++++++|.++.|. +++
T Consensus 250 ~~~l~~~--------~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~ 321 (332)
T TIGR01607 250 ASELIKA--------TDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEE 321 (332)
T ss_pred HHHHHHH--------HHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHH
Confidence 0111110 11122233444 799999999999999887766553 4678999999999999985 588
Q ss_pred HHHHHHHHHH
Q 023794 246 FASLILNFIA 255 (277)
Q Consensus 246 ~~~~i~~fl~ 255 (277)
+.+.|.+||+
T Consensus 322 v~~~i~~wL~ 331 (332)
T TIGR01607 322 VLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 52
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.94 E-value=1.9e-25 Score=167.39 Aligned_cols=213 Identities=22% Similarity=0.245 Sum_probs=127.9
Q ss_pred CeEEEEcCCCCCCCCC---CCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEc
Q 023794 33 ARVVAMDLRGHGKSSS---ENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVD 109 (277)
Q Consensus 33 ~~vi~~d~~G~G~S~~---~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~ 109 (277)
|+|+++|+||+|.|++ .....++.+++++++..+++.+ +.++++++||||||++++.+|..+| ++|+++|+++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~vG~S~Gg~~~~~~a~~~p-~~v~~lvl~~ 76 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL---GIKKINLVGHSMGGMLALEYAAQYP-ERVKKLVLIS 76 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH---TTSSEEEEEETHHHHHHHHHHHHSG-GGEEEEEEES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh---CCCCeEEEEECCChHHHHHHHHHCc-hhhcCcEEEe
Confidence 7899999999999995 3445789999999999999999 6777999999999999999999999 8999999999
Q ss_pred cCC--CcchHH--hHH--HHHHHHhhccc--hhhHHHHHHHhhcCC-ccccc-hhhhhcCccccccCCCcchhHHHHHhH
Q 023794 110 VVE--GTAMAS--LIH--MQKILSTRMQH--FSSIEKAIEWSVKGG-SLRNL-DSARLSIPSTLKYDDSKKCYVYRARLE 179 (277)
Q Consensus 110 ~~~--~~~~~~--~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (277)
+.. ...... ... ........... ............... ..... ............+..............
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00561_consen 77 PPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFW 156 (230)
T ss_dssp ESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred eeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcc
Confidence 862 000000 000 00000000000 000000000000000 00000 000000000000000000000000000
Q ss_pred HHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhh---hhcCCccEEEeCCCCCcccccChHHHHHHHH
Q 023794 180 ETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIG---QMQGKFQMVVVRHTGHAIQEDAPEEFASLIL 251 (277)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~---~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 251 (277)
.. .......+....+..+++|+++++|++|++++.+... +..|+.++++++++||+.++++|+++++.|.
T Consensus 157 ~~--~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 157 NA--LGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HH--HHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cc--ccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 00 0111123445567889999999999999999887654 4679999999999999999999999999885
No 53
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.93 E-value=1.1e-23 Score=168.80 Aligned_cols=213 Identities=12% Similarity=0.095 Sum_probs=132.6
Q ss_pred CCCeEEEEccCCCC-cccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYS-GLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~-~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
..|+||+.||+.+. ...|..+.+.|.+ ||.|+++|+||+|.|.... ...+......++.+.+......+.+++.++|
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~-~~~d~~~~~~avld~l~~~~~vd~~ri~l~G 271 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK-LTQDSSLLHQAVLNALPNVPWVDHTRVAAFG 271 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-ccccHHHHHHHHHHHHHhCcccCcccEEEEE
Confidence 45666666666554 3568888888876 8999999999999996532 1233444444555555444333557899999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhh-HHHHHHHhhcCCccccchhhhhcCcc
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSS-IEKAIEWSVKGGSLRNLDSARLSIPS 161 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
|||||.+++.+|..+| ++|+++|++++............ . ..+. ....+...+... ..
T Consensus 272 ~S~GG~~Al~~A~~~p-~ri~a~V~~~~~~~~~~~~~~~~----~----~~p~~~~~~la~~lg~~---~~--------- 330 (414)
T PRK05077 272 FRFGANVAVRLAYLEP-PRLKAVACLGPVVHTLLTDPKRQ----Q----QVPEMYLDVLASRLGMH---DA--------- 330 (414)
T ss_pred EChHHHHHHHHHHhCC-cCceEEEEECCccchhhcchhhh----h----hchHHHHHHHHHHhCCC---CC---------
Confidence 9999999999999998 89999999988653211100000 0 0000 000000000000 00
Q ss_pred ccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhh-cCCCccEEEEEeCCCCCCchhhhhh---hcCCccEEEeCCCCCc
Q 023794 162 TLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKF-LSCPVPKLLLLAGTDRLDRPLTIGQ---MQGKFQMVVVRHTGHA 237 (277)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~P~l~i~g~~D~~~~~~~~~~---~~~~~~~~~~~~~gH~ 237 (277)
........ ...+.......+ .++++|+|+|+|++|+++|.+.... ..++.++++++++
T Consensus 331 --------~~~~l~~~-------l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~--- 392 (414)
T PRK05077 331 --------SDEALRVE-------LNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK--- 392 (414)
T ss_pred --------ChHHHHHH-------hhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---
Confidence 00000000 000000000111 5789999999999999999877654 3478899999986
Q ss_pred ccccChHHHHHHHHHHHHhc
Q 023794 238 IQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 238 ~~~e~p~~~~~~i~~fl~~~ 257 (277)
++.+.++++.+.+.+||++.
T Consensus 393 ~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 393 PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CccCCHHHHHHHHHHHHHHH
Confidence 56689999999999999875
No 54
>PRK11071 esterase YqiA; Provisional
Probab=99.93 E-value=2.9e-24 Score=154.45 Aligned_cols=183 Identities=15% Similarity=0.087 Sum_probs=126.8
Q ss_pred CeEEEEccCCCCcccHHH--HHHhhhh---cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Q 023794 7 PVIFCLHGGGYSGLSFAL--AAGKIKE---KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~~--~~~~l~~---~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lv 81 (277)
|+|||+||++++...|.. +.+.+.+ +|+|+++|+|||| ++.++++.++++.+ +.++++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~---~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH---GGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc---CCCCeEEE
Confidence 689999999999999984 4466654 7999999999884 35788888999887 56789999
Q ss_pred EeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCcc
Q 023794 82 GHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPS 161 (277)
Q Consensus 82 G~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
||||||.+++.+|.++| . .+|++++..... ..... ......... ...
T Consensus 67 G~S~Gg~~a~~~a~~~~-~---~~vl~~~~~~~~----~~~~~------------------~~~~~~~~~-------~~~ 113 (190)
T PRK11071 67 GSSLGGYYATWLSQCFM-L---PAVVVNPAVRPF----ELLTD------------------YLGENENPY-------TGQ 113 (190)
T ss_pred EECHHHHHHHHHHHHcC-C---CEEEECCCCCHH----HHHHH------------------hcCCccccc-------CCC
Confidence 99999999999999998 4 368888754310 00000 000000000 000
Q ss_pred ccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCCCCccccc
Q 023794 162 TLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHTGHAIQED 241 (277)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 241 (277)
... .. ......... .+... .+.++|+++|+|.+|.+++.+...++..+++.++++|++|.+ .
T Consensus 114 ~~~-----~~---~~~~~d~~~------~~~~~--i~~~~~v~iihg~~De~V~~~~a~~~~~~~~~~~~~ggdH~f--~ 175 (190)
T PRK11071 114 QYV-----LE---SRHIYDLKV------MQIDP--LESPDLIWLLQQTGDEVLDYRQAVAYYAACRQTVEEGGNHAF--V 175 (190)
T ss_pred cEE-----Ec---HHHHHHHHh------cCCcc--CCChhhEEEEEeCCCCcCCHHHHHHHHHhcceEEECCCCcch--h
Confidence 000 00 000110000 01111 247788999999999999999999999999999999999988 4
Q ss_pred ChHHHHHHHHHHHH
Q 023794 242 APEEFASLILNFIA 255 (277)
Q Consensus 242 ~p~~~~~~i~~fl~ 255 (277)
..+++.+.+.+|++
T Consensus 176 ~~~~~~~~i~~fl~ 189 (190)
T PRK11071 176 GFERYFNQIVDFLG 189 (190)
T ss_pred hHHHhHHHHHHHhc
Confidence 44889999999975
No 55
>PRK13604 luxD acyl transferase; Provisional
Probab=99.91 E-value=6.9e-23 Score=154.07 Aligned_cols=218 Identities=16% Similarity=0.144 Sum_probs=134.6
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCC-CCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGH-GKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~-G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
..++||++||++.....+..++..|.+ ||.|+.||.||+ |.|++.-. ..+......|+..+++++...+.+++.|+|
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~-~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG 114 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID-EFTMSIGKNSLLTVVDWLNTRGINNLGLIA 114 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc-cCcccccHHHHHHHHHHHHhcCCCceEEEE
Confidence 457899999999987778899999987 999999999987 99976542 345555678998889888765667899999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccc
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPST 162 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (277)
|||||.+|+..|.. ..++++|+.+|...... .+.... ...+. .++ ....+..
T Consensus 115 ~SmGgava~~~A~~---~~v~~lI~~sp~~~l~d--------~l~~~~----------~~~~~-----~~p--~~~lp~~ 166 (307)
T PRK13604 115 ASLSARIAYEVINE---IDLSFLITAVGVVNLRD--------TLERAL----------GYDYL-----SLP--IDELPED 166 (307)
T ss_pred ECHHHHHHHHHhcC---CCCCEEEEcCCcccHHH--------HHHHhh----------hcccc-----cCc--ccccccc
Confidence 99999999777764 34899999887654221 000000 00000 000 0000000
Q ss_pred cccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc-----CCccEEEeCCCCCc
Q 023794 163 LKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ-----GKFQMVVVRHTGHA 237 (277)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-----~~~~~~~~~~~gH~ 237 (277)
..+...... ...........-..-.....+...++++|+|+|||.+|.+++.+...++. .+.++++++|++|.
T Consensus 167 ~d~~g~~l~--~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 167 LDFEGHNLG--SEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD 244 (307)
T ss_pred ccccccccc--HHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccc
Confidence 000000000 00000000000000001122334677899999999999999988776654 35789999999997
Q ss_pred ccccChHHHHHHHHHHHHhcC
Q 023794 238 IQEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 238 ~~~e~p~~~~~~i~~fl~~~~ 258 (277)
+.. ++ -.+++|.++..
T Consensus 245 l~~-~~----~~~~~~~~~~~ 260 (307)
T PRK13604 245 LGE-NL----VVLRNFYQSVT 260 (307)
T ss_pred cCc-ch----HHHHHHHHHHH
Confidence 654 33 24556665543
No 56
>PRK10566 esterase; Provisional
Probab=99.90 E-value=8.3e-22 Score=149.33 Aligned_cols=202 Identities=15% Similarity=0.102 Sum_probs=122.8
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcH-------HHHHHHHHHHHHHHhcC---
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSI-------ETMCNDVLAVLKEMYGE--- 73 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~-------~~~~~d~~~~l~~l~~~--- 73 (277)
..|+||++||++++...|..+...|.+ ||.|+++|+||||.+..... ...+ ....+|+.++++.+...
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDE-ARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcc-ccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 458999999999999899999999976 89999999999998643221 1111 22345566666665432
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccch
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLD 153 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (277)
+.++++++|||+||.+++.++..+| +....++++.+... .... ....... ..
T Consensus 105 ~~~~i~v~G~S~Gg~~al~~~~~~~-~~~~~~~~~~~~~~------~~~~-----------------~~~~~~~----~~ 156 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALGIMARHP-WVKCVASLMGSGYF------TSLA-----------------RTLFPPL----IP 156 (249)
T ss_pred CccceeEEeecccHHHHHHHHHhCC-CeeEEEEeeCcHHH------HHHH-----------------HHhcccc----cc
Confidence 4578999999999999999999887 53333344332100 0000 0000000 00
Q ss_pred hhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCC-CccEEEEEeCCCCCCchhhhhhhc---C-----
Q 023794 154 SARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSC-PVPKLLLLAGTDRLDRPLTIGQMQ---G----- 224 (277)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~---~----- 224 (277)
..+ .......... ..... .+....+.++ ++|+|+++|++|.+++.+...++. +
T Consensus 157 ----~~~--------~~~~~~~~~~----~~~~~--~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~ 218 (249)
T PRK10566 157 ----ETA--------AQQAEFNNIV----APLAE--WEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLD 218 (249)
T ss_pred ----ccc--------ccHHHHHHHH----HHHhh--cChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC
Confidence 000 0000000000 00000 0112233454 799999999999999887655443 1
Q ss_pred -CccEEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 225 -KFQMVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 225 -~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
+++++.++++||... ....+.+.+||+++
T Consensus 219 ~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 219 KNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred cceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 357788999999863 34678888999864
No 57
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.89 E-value=1.4e-21 Score=149.46 Aligned_cols=238 Identities=24% Similarity=0.330 Sum_probs=140.1
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhh---cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKE---KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~---~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
+|+|+++||++++...|......+.. .|+++++|+||||.|. .. .+.....++++..+++.+ +..+++++|
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~---~~~~~~l~G 94 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDAL---GLEKVVLVG 94 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHh---CCCceEEEE
Confidence 56899999999999999884333333 2899999999999997 11 345555689999999988 555699999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHH--------hHHHHHHHHhhccc-hhhHHHHHHHhhcCCccccch
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMAS--------LIHMQKILSTRMQH-FSSIEKAIEWSVKGGSLRNLD 153 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (277)
||+||.+++.++..+| +++.+++++++........ .............. ....... ...........
T Consensus 95 ~S~Gg~~~~~~~~~~p-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 170 (282)
T COG0596 95 HSMGGAVALALALRHP-DRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAAL---LAALGLLAALA 170 (282)
T ss_pred ecccHHHHHHHHHhcc-hhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhh---hhccccccccc
Confidence 9999999999999999 8999999999764311000 00000000000000 0000000 00000000000
Q ss_pred hhhhcCccccccCCCcchhHHHHHhHH-----HHHHHHHHHh-hhhhhhcCCCccEEEEEeCCCCCCchh---hhhhhcC
Q 023794 154 SARLSIPSTLKYDDSKKCYVYRARLEE-----TEQYWRAWYE-GLSEKFLSCPVPKLLLLAGTDRLDRPL---TIGQMQG 224 (277)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~i~~P~l~i~g~~D~~~~~~---~~~~~~~ 224 (277)
..... .................... .......... .....+..+++|+++++|++|.+.+.. ...+..+
T Consensus 171 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~ 248 (282)
T COG0596 171 AAARA--GLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALP 248 (282)
T ss_pred ccchh--ccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCC
Confidence 00000 00000000000000000000 0000001011 233456788899999999999666643 3444556
Q ss_pred C-ccEEEeCCCCCcccccChHHHHHHHHHHHH
Q 023794 225 K-FQMVVVRHTGHAIQEDAPEEFASLILNFIA 255 (277)
Q Consensus 225 ~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 255 (277)
+ .++++++++||+++.++|+.+.+.+.+|++
T Consensus 249 ~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 249 NDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred CCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 4 899999999999999999999999988554
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.89 E-value=1.2e-21 Score=155.26 Aligned_cols=103 Identities=14% Similarity=0.120 Sum_probs=82.0
Q ss_pred CCeEEEEccCCCCcccH-----HHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHH-HHHHHHHHhcC-CCCc
Q 023794 6 GPVIFCLHGGGYSGLSF-----ALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCND-VLAVLKEMYGE-QPPS 77 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~-----~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d-~~~~l~~l~~~-~~~~ 77 (277)
+++||++||+..+...+ +.+++.|.+ ||+|+++|++|+|.|+. ..++++++.+ +.+.++.+... +.++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~~~~~~~ 137 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICRTSKLDQ 137 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 46799999986555554 578888876 89999999999998753 3467777644 66666665432 4568
Q ss_pred EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
++++||||||++++.++..+| ++|+++|+++++..
T Consensus 138 i~lvGhS~GG~i~~~~~~~~~-~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 138 ISLLGICQGGTFSLCYAALYP-DKIKNLVTMVTPVD 172 (350)
T ss_pred ccEEEECHHHHHHHHHHHhCc-hheeeEEEeccccc
Confidence 999999999999999999999 89999999998754
No 59
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.89 E-value=2.6e-21 Score=171.46 Aligned_cols=251 Identities=10% Similarity=0.120 Sum_probs=142.8
Q ss_pred CCCeEEEEccCCCCcccHHHH-----HHhhhh-cCeEEEEcCCCCCCCCCCCC-CCCcHHHHHHHHHHHHHHHhcCCCCc
Q 023794 5 EGPVIFCLHGGGYSGLSFALA-----AGKIKE-KARVVAMDLRGHGKSSSEND-IDLSIETMCNDVLAVLKEMYGEQPPS 77 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~-----~~~l~~-~~~vi~~d~~G~G~S~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~ 77 (277)
.+++|||+||++.+...|+.. ++.|.+ ||+|+++|+ |.++.+.. ..+++.+++..+.+.++.+.....++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 568999999999999999865 778865 899999994 66665432 23577777777777776643333457
Q ss_pred EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchH---HhH-HH-H---H----HHHhhccchhhH-HHHHHHhh
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMA---SLI-HM-Q---K----ILSTRMQHFSSI-EKAIEWSV 144 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~---~~~-~~-~---~----~~~~~~~~~~~~-~~~~~~~~ 144 (277)
++++||||||++++.+++.+++++|+++|+++++...... ... .. . . .+.... ..+.. ......+.
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~l 221 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRL-DIPGWMARTGFQML 221 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcC-CCCHHHHHHHHHhc
Confidence 9999999999999999886653689999998876432111 000 00 0 0 000000 00000 00000000
Q ss_pred cCCc-cccchhhhhcCcc-ccccCCC--cchhHHH----HHhHHHHHHHHHHHh---------hh---hhhhcCCCccEE
Q 023794 145 KGGS-LRNLDSARLSIPS-TLKYDDS--KKCYVYR----ARLEETEQYWRAWYE---------GL---SEKFLSCPVPKL 204 (277)
Q Consensus 145 ~~~~-~~~~~~~~~~~~~-~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~---------~~---~~~~~~i~~P~l 204 (277)
.... ............. ....... ....... ..-.........+.. .. ...+.++++|+|
T Consensus 222 ~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L 301 (994)
T PRK07868 222 DPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVL 301 (994)
T ss_pred ChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEE
Confidence 0000 0000000000000 0000000 0000000 000011111222211 01 124789999999
Q ss_pred EEEeCCCCCCchhhhh---hhcCCccE-EEeCCCCCccccc---ChHHHHHHHHHHHHhcCC
Q 023794 205 LLLAGTDRLDRPLTIG---QMQGKFQM-VVVRHTGHAIQED---APEEFASLILNFIARNRI 259 (277)
Q Consensus 205 ~i~g~~D~~~~~~~~~---~~~~~~~~-~~~~~~gH~~~~e---~p~~~~~~i~~fl~~~~~ 259 (277)
+|+|++|.+++++... +..+++++ ++++++||+.++- -++++...|.+||++...
T Consensus 302 ~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 302 AFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred EEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 9999999999887654 44578887 6889999998765 458899999999998663
No 60
>PLN02872 triacylglycerol lipase
Probab=99.88 E-value=5.9e-22 Score=156.89 Aligned_cols=107 Identities=19% Similarity=0.255 Sum_probs=83.0
Q ss_pred CCCeEEEEccCCCCcccHH------HHHHhhhh-cCeEEEEcCCCCCCCCC----CC-C---CCCcHHHHH-HHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSFA------LAAGKIKE-KARVVAMDLRGHGKSSS----EN-D---IDLSIETMC-NDVLAVLK 68 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~------~~~~~l~~-~~~vi~~d~~G~G~S~~----~~-~---~~~~~~~~~-~d~~~~l~ 68 (277)
.+|+|||+||+++++..|. .+...|++ ||+|+++|+||++.|.. .+ + ..+++++++ .|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 4689999999998888883 34445665 99999999999876532 11 1 257899999 79999999
Q ss_pred HHhcCCCCcEEEEEeChhHHHHHHHHHHhcc--cccceEEEEccCC
Q 023794 69 EMYGEQPPSIVLVGHSMGGSVAVHVAAKKTL--RSLHGLVVVDVVE 112 (277)
Q Consensus 69 ~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~~v~~lvl~~~~~ 112 (277)
++.....++++++|||+||.+++.++ .+|+ ++|+.+++++|..
T Consensus 153 ~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 153 YVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred HHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 98644346899999999999998555 5662 3688889988874
No 61
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.87 E-value=1e-20 Score=153.97 Aligned_cols=230 Identities=12% Similarity=0.104 Sum_probs=129.9
Q ss_pred CCCeEEEEccCCCCcccHH-----HHHHhhhh-cCeEEEEcCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHHhcCCCCc
Q 023794 5 EGPVIFCLHGGGYSGLSFA-----LAAGKIKE-KARVVAMDLRGHGKSSSENDI-DLSIETMCNDVLAVLKEMYGEQPPS 77 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~-----~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~-~~~~~~~~~d~~~~l~~l~~~~~~~ 77 (277)
.++|||++||+......|+ .++..|.+ ||+|+++|++|+|.|....+. .|..+.+.+.+..+.+.+ +.++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~---g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAIT---GEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhc---CCCC
Confidence 4689999999998888885 68888875 999999999999988654321 233334444455555444 6678
Q ss_pred EEEEEeChhHHHHH----HHHHHh-cccccceEEEEccCCCcchHHhH----------HHHHHHHhhccchhh--HHHHH
Q 023794 78 IVLVGHSMGGSVAV----HVAAKK-TLRSLHGLVVVDVVEGTAMASLI----------HMQKILSTRMQHFSS--IEKAI 140 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~----~~a~~~-p~~~v~~lvl~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~~~~~ 140 (277)
++++||||||.++. .++..+ + ++|++++++++.......... ........ ...++. +...+
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~-~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~-~G~lpg~~m~~~F 341 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDD-KRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGG-GGYLDGRQMAVTF 341 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCC-CccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHh-cCCCCHHHHHHHH
Confidence 99999999999852 345555 6 789999999987544322111 01111100 000000 11111
Q ss_pred HHhhcCCcccc-chhhhhcCccccccCCCcchhHHHH-----HhHHHHHHHHHHH------------hhhhhhhcCCCcc
Q 023794 141 EWSVKGGSLRN-LDSARLSIPSTLKYDDSKKCYVYRA-----RLEETEQYWRAWY------------EGLSEKFLSCPVP 202 (277)
Q Consensus 141 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~------------~~~~~~~~~i~~P 202 (277)
..+......-. ............ ......+.. .......+++..+ .+....+..|++|
T Consensus 342 ~~lrp~~l~w~~~v~~yl~g~~~~----~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vP 417 (532)
T TIGR01838 342 SLLRENDLIWNYYVDNYLKGKSPV----PFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVP 417 (532)
T ss_pred HhcChhhHHHHHHHHHHhcCCCcc----chhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCC
Confidence 11100000000 000000000000 000011110 0111111221111 1233467889999
Q ss_pred EEEEEeCCCCCCchhhhh---hhcCCccEEEeCCCCCcccccCh
Q 023794 203 KLLLLAGTDRLDRPLTIG---QMQGKFQMVVVRHTGHAIQEDAP 243 (277)
Q Consensus 203 ~l~i~g~~D~~~~~~~~~---~~~~~~~~~~~~~~gH~~~~e~p 243 (277)
+++|.|++|.+++.+... +..++.+..+++++||.+++++|
T Consensus 418 vLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 418 VYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNP 461 (532)
T ss_pred EEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCC
Confidence 999999999998876544 45678888999999999998876
No 62
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.86 E-value=2.7e-20 Score=137.30 Aligned_cols=234 Identities=19% Similarity=0.201 Sum_probs=134.0
Q ss_pred CCCeEEEEccCCCCccc-HHHHH-----HhhhhcCeEEEEcCCCCCCCC--CCCCC-CCcHHHHHHHHHHHHHHHhcCCC
Q 023794 5 EGPVIFCLHGGGYSGLS-FALAA-----GKIKEKARVVAMDLRGHGKSS--SENDI-DLSIETMCNDVLAVLKEMYGEQP 75 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~-~~~~~-----~~l~~~~~vi~~d~~G~G~S~--~~~~~-~~~~~~~~~d~~~~l~~l~~~~~ 75 (277)
++|+||-.|..|.+... |..+. ..+.++|.++-+|.||+..-. .+.+. -.|++++++++.++++++ +.
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f---~l 98 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF---GL 98 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH---T-
T ss_pred CCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC---Cc
Confidence 58999999999998877 77654 456679999999999995543 33332 349999999999999999 78
Q ss_pred CcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhcc---chhhHHHHH-HHhhcCCcccc
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQ---HFSSIEKAI-EWSVKGGSLRN 151 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~ 151 (277)
+.++.+|--.|+.|..++|..+| ++|.++||+++.+.......+...+....... .-......+ ...+.......
T Consensus 99 k~vIg~GvGAGAnIL~rfAl~~p-~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~ 177 (283)
T PF03096_consen 99 KSVIGFGVGAGANILARFALKHP-ERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEEN 177 (283)
T ss_dssp --EEEEEETHHHHHHHHHHHHSG-GGEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHC
T ss_pred cEEEEEeeccchhhhhhccccCc-cceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcccccccccc
Confidence 88999999999999999999999 99999999999765443222222222211110 001111111 11111100000
Q ss_pred chhhhhcCccccccCCCcchhHHHHHh------HHHHHHHHHH--HhhhhhhhcCCCccEEEEEeCCCCCCch--hhhhh
Q 023794 152 LDSARLSIPSTLKYDDSKKCYVYRARL------EETEQYWRAW--YEGLSEKFLSCPVPKLLLLAGTDRLDRP--LTIGQ 221 (277)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~--~~~~~ 221 (277)
.......++..+ .+...++..+ +.++...+....||+|++.|+..+.... +...+
T Consensus 178 ---------------n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~vv~~ns~ 242 (283)
T PF03096_consen 178 ---------------NSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDVVEMNSK 242 (283)
T ss_dssp ---------------T-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHHHHHHHH
T ss_pred ---------------cHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhHHHHHhh
Confidence 000111122111 2233333333 3456666778889999999999986432 23334
Q ss_pred hcC-CccEEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 222 MQG-KFQMVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 222 ~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
+-| +.++..++++|=++..|+|+.+++.++-||+..
T Consensus 243 Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 243 LDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp S-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred cCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 444 568999999999999999999999999999864
No 63
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.86 E-value=1.2e-20 Score=141.45 Aligned_cols=106 Identities=22% Similarity=0.212 Sum_probs=89.3
Q ss_pred CCeEEEEccCCCCc----ccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 6 GPVIFCLHGGGYSG----LSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 6 ~p~vv~~HG~~~~~----~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
.++|||+||++... ..|..+++.|++ ||+|+++|+||||.|+.... ..+++.+++|+..+++.+...+.++++|
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~~~~v~L 103 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQGHPPVTL 103 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 47899999988643 456777888875 89999999999999976543 4688889999998888776556678999
Q ss_pred EEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 81 VGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
+||||||.+++.+|.++| ++++++|+++|...
T Consensus 104 vG~SmGG~vAl~~A~~~p-~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 104 WGLRLGALLALDAANPLA-AKCNRLVLWQPVVS 135 (266)
T ss_pred EEECHHHHHHHHHHHhCc-cccceEEEeccccc
Confidence 999999999999999999 89999999997543
No 64
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.85 E-value=1.2e-18 Score=126.98 Aligned_cols=106 Identities=25% Similarity=0.340 Sum_probs=95.5
Q ss_pred CCCCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Q 023794 3 GTEGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lv 81 (277)
|+...+||-+||.++++..|+.+.+.|.+ +.|+|.+++||+|.++.+++..|+-++...-+.++++.+... ++++.+
T Consensus 32 gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~--~~~i~~ 109 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK--GKLIFL 109 (297)
T ss_pred CCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC--CceEEE
Confidence 44445899999999999999999999987 999999999999999999888999999999999999999543 478999
Q ss_pred EeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 82 GHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 82 G~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
|||.||-.|+.+|..+| ..++++++|+..
T Consensus 110 gHSrGcenal~la~~~~---~~g~~lin~~G~ 138 (297)
T PF06342_consen 110 GHSRGCENALQLAVTHP---LHGLVLINPPGL 138 (297)
T ss_pred EeccchHHHHHHHhcCc---cceEEEecCCcc
Confidence 99999999999999987 679999999753
No 65
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.85 E-value=9.1e-20 Score=135.56 Aligned_cols=247 Identities=17% Similarity=0.180 Sum_probs=135.7
Q ss_pred CCCeEEEEccCCCCccc-H-HHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEE
Q 023794 5 EGPVIFCLHGGGYSGLS-F-ALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVL 80 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~-~-~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~l 80 (277)
.+|.||++||+.++... | +.++..+.+ ||.|+++|.|||+.+......-|+. -..+|+..+++.+... ...++..
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~-G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHS-GETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecc-cchhHHHHHHHHHHHhCCCCceEE
Confidence 46899999998655443 3 567777765 9999999999999887644323322 2337888888888653 4568999
Q ss_pred EEeChhH-HHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHH-hhccc--hhhHHHHHHH-hhc-CCccccc-h
Q 023794 81 VGHSMGG-SVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILS-TRMQH--FSSIEKAIEW-SVK-GGSLRNL-D 153 (277)
Q Consensus 81 vG~S~Gg-~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~-~~~-~~~~~~~-~ 153 (277)
+|.|+|| +++..++.+--.-.+.+.+.++.+... ......+...+. ..... ...+.+.... +.. ....... .
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl-~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~ 231 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL-EACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVL 231 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCHHHH-HHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHH
Confidence 9999999 555555544321245666665543322 111111111111 00000 0000000000 000 0000000 0
Q ss_pred hhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhh----hcCCccEE
Q 023794 154 SARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQ----MQGKFQMV 229 (277)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~----~~~~~~~~ 229 (277)
...........++ .....-...+....+|++. .+....+.+|.+|+|+|++.+|++++++.+-+ ..|++.+.
T Consensus 232 ~~ik~~~ti~eFD--~~~Tap~~Gf~da~dYYr~--aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~ 307 (345)
T COG0429 232 AAIKRCRTIREFD--DLLTAPLHGFADAEDYYRQ--ASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQ 307 (345)
T ss_pred HHHHhhchHHhcc--ceeeecccCCCcHHHHHHh--ccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEE
Confidence 0000000000000 0000011122233333332 23345678999999999999999988765433 55889999
Q ss_pred EeCCCCCccccc----ChH-HHHHHHHHHHHhc
Q 023794 230 VVRHTGHAIQED----APE-EFASLILNFIARN 257 (277)
Q Consensus 230 ~~~~~gH~~~~e----~p~-~~~~~i~~fl~~~ 257 (277)
..+.+||..++. +|. +..+.+.+||+..
T Consensus 308 ~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 308 LTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred eecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 999999999887 443 6778888888764
No 66
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.85 E-value=5.8e-19 Score=128.40 Aligned_cols=236 Identities=18% Similarity=0.210 Sum_probs=153.8
Q ss_pred CCCeEEEEccCCCCccc-HHHHH-----HhhhhcCeEEEEcCCCCCC--CCCCCCC-CCcHHHHHHHHHHHHHHHhcCCC
Q 023794 5 EGPVIFCLHGGGYSGLS-FALAA-----GKIKEKARVVAMDLRGHGK--SSSENDI-DLSIETMCNDVLAVLKEMYGEQP 75 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~-~~~~~-----~~l~~~~~vi~~d~~G~G~--S~~~~~~-~~~~~~~~~d~~~~l~~l~~~~~ 75 (277)
++|++|-.|..+.+... |..+. ..+.++|.|+.+|.||+-. ...+.+. -.|.++++++|..+++++ +.
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f---~l 121 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF---GL 121 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc---Cc
Confidence 57899999999988776 76654 4455679999999999844 3334432 349999999999999999 78
Q ss_pred CcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhh---H-HHHHHHhhcCCcccc
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSS---I-EKAIEWSVKGGSLRN 151 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~ 151 (277)
+.++-+|--.|+.|..++|..|| ++|.++||+++.+.......+...+........... . +-.+...+.......
T Consensus 122 k~vIg~GvGAGAyIL~rFAl~hp-~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~ 200 (326)
T KOG2931|consen 122 KSVIGMGVGAGAYILARFALNHP-ERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN 200 (326)
T ss_pred ceEEEecccccHHHHHHHHhcCh-hheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc
Confidence 88999999999999999999999 999999999987654433222222222111111111 1 111112222111111
Q ss_pred chhhhhcCccccccCCCcchhHHHHHh------HHHHHHHHHH--Hhhhhhhhc----CCCccEEEEEeCCCCCCch--h
Q 023794 152 LDSARLSIPSTLKYDDSKKCYVYRARL------EETEQYWRAW--YEGLSEKFL----SCPVPKLLLLAGTDRLDRP--L 217 (277)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~~~~~----~i~~P~l~i~g~~D~~~~~--~ 217 (277)
.......++..+ .+...++..+ +.|+..... .++||+|++.|...+.+.. +
T Consensus 201 ---------------~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv~ 265 (326)
T KOG2931|consen 201 ---------------NSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSAVVE 265 (326)
T ss_pred ---------------cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchhhhhhh
Confidence 011111222211 1222223222 223333333 4569999999999886432 2
Q ss_pred hhhhhcC-CccEEEeCCCCCcccccChHHHHHHHHHHHHhcCC
Q 023794 218 TIGQMQG-KFQMVVVRHTGHAIQEDAPEEFASLILNFIARNRI 259 (277)
Q Consensus 218 ~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 259 (277)
.-.++-| +..+..+.++|-.+..++|..+++.+.-||+...-
T Consensus 266 ~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy 308 (326)
T KOG2931|consen 266 CNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGY 308 (326)
T ss_pred hhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCCc
Confidence 2233333 56899999999999999999999999999998654
No 67
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.85 E-value=6.3e-20 Score=127.40 Aligned_cols=140 Identities=31% Similarity=0.524 Sum_probs=104.5
Q ss_pred eEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChh
Q 023794 8 VIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMG 86 (277)
Q Consensus 8 ~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~G 86 (277)
+||++||++++...|..+.+.|.+ ||.|+.+|+||+|.+.... .. +++.+.+..... +.++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~-~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD----AV----ERVLADIRAGYP-DPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH----HH----HHHHHHHHHHHC-TCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH----HH----HHHHHHHHhhcC-CCCcEEEEEEccC
Confidence 689999999999999999999987 8999999999999873211 22 222222212122 5679999999999
Q ss_pred HHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccccccC
Q 023794 87 GSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYD 166 (277)
Q Consensus 87 g~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (277)
|.+++.++.++ .+++++|++++.+.
T Consensus 72 g~~a~~~~~~~--~~v~~~v~~~~~~~----------------------------------------------------- 96 (145)
T PF12695_consen 72 GAIAANLAARN--PRVKAVVLLSPYPD----------------------------------------------------- 96 (145)
T ss_dssp HHHHHHHHHHS--TTESEEEEESESSG-----------------------------------------------------
T ss_pred cHHHHHHhhhc--cceeEEEEecCccc-----------------------------------------------------
Confidence 99999999987 47999999987200
Q ss_pred CCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc----CCccEEEeCCCCCc
Q 023794 167 DSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ----GKFQMVVVRHTGHA 237 (277)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~----~~~~~~~~~~~gH~ 237 (277)
.+.+...++|+++++|++|.+++.+...++. .+.+++++++++|+
T Consensus 97 --------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 --------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred --------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0111445569999999999999887665543 35799999999996
No 68
>PRK11460 putative hydrolase; Provisional
Probab=99.83 E-value=8.2e-19 Score=130.50 Aligned_cols=173 Identities=13% Similarity=0.156 Sum_probs=112.9
Q ss_pred CCCCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCC----------CCCC---cHHHHHHHHHHHHH
Q 023794 3 GTEGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSEN----------DIDL---SIETMCNDVLAVLK 68 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~----------~~~~---~~~~~~~d~~~~l~ 68 (277)
++..|+||++||++++...|..+.+.|.+ .+.+..++.+|...+.... .... .+.+..+.+.+.++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 34568899999999999999999999976 4455555566543221110 0011 12233334444444
Q ss_pred HHhc---CCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhc
Q 023794 69 EMYG---EQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVK 145 (277)
Q Consensus 69 ~l~~---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (277)
.+.. ...++++++|||+||.+++.++..+| +.+.+++.+++...
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~-~~~~~vv~~sg~~~-------------------------------- 139 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEP-GLAGRVIAFSGRYA-------------------------------- 139 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCC-CcceEEEEeccccc--------------------------------
Confidence 4322 23468999999999999999999988 77777776643100
Q ss_pred CCccccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc--
Q 023794 146 GGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ-- 223 (277)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-- 223 (277)
.. +. ....+.|+++++|++|++++.+...++.
T Consensus 140 -----~~-------~~----------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~ 173 (232)
T PRK11460 140 -----SL-------PE----------------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEA 173 (232)
T ss_pred -----cc-------cc----------------------------------cccCCCcEEEEecCCCCccCHHHHHHHHHH
Confidence 00 00 0113589999999999999987655443
Q ss_pred -----CCccEEEeCCCCCcccccChHHHHHHHHHHH
Q 023794 224 -----GKFQMVVVRHTGHAIQEDAPEEFASLILNFI 254 (277)
Q Consensus 224 -----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 254 (277)
.++++++++++||.+..+.-+.+.+.|.++|
T Consensus 174 L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 174 LISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred HHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 2467888999999987655555555555554
No 69
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=1.5e-19 Score=129.99 Aligned_cols=187 Identities=20% Similarity=0.235 Sum_probs=129.5
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC--CCCcEEEE
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE--QPPSIVLV 81 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~~lv 81 (277)
.++|++.||...+....-.+...|.. +++|+.+|+.|+|.|.+.+... ...+|+.++.+.|+.. ..++++|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~----n~y~Di~avye~Lr~~~g~~~~Iil~ 135 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER----NLYADIKAVYEWLRNRYGSPERIILY 135 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc----cchhhHHHHHHHHHhhcCCCceEEEE
Confidence 47999999986655544445555655 8999999999999999876422 5556777777666543 35799999
Q ss_pred EeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCcc
Q 023794 82 GHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPS 161 (277)
Q Consensus 82 G~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
|+|+|+..++.+|.+.| +.++||.+|..... +.+...... . ...
T Consensus 136 G~SiGt~~tv~Lasr~~---~~alVL~SPf~S~~-------------------------rv~~~~~~~-~-----~~~-- 179 (258)
T KOG1552|consen 136 GQSIGTVPTVDLASRYP---LAAVVLHSPFTSGM-------------------------RVAFPDTKT-T-----YCF-- 179 (258)
T ss_pred EecCCchhhhhHhhcCC---cceEEEeccchhhh-------------------------hhhccCcce-E-----Eee--
Confidence 99999999999999986 99999998843211 001100000 0 000
Q ss_pred ccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc---C-CccEEEeCCCCCc
Q 023794 162 TLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ---G-KFQMVVVRHTGHA 237 (277)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~---~-~~~~~~~~~~gH~ 237 (277)
+. . ...+....++||+|+++|.+|.+++...-.++. + ..+..++.|+||.
T Consensus 180 ----d~----------f------------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~ 233 (258)
T KOG1552|consen 180 ----DA----------F------------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHN 233 (258)
T ss_pred ----cc----------c------------cccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCc
Confidence 00 0 002334788999999999999988876554444 3 3477888899996
Q ss_pred ccccChHHHHHHHHHHHHhcCC
Q 023794 238 IQEDAPEEFASLILNFIARNRI 259 (277)
Q Consensus 238 ~~~e~p~~~~~~i~~fl~~~~~ 259 (277)
-.. ...++.+.+..|+.....
T Consensus 234 ~~~-~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 234 DIE-LYPEYIEHLRRFISSVLP 254 (258)
T ss_pred ccc-cCHHHHHHHHHHHHHhcc
Confidence 554 456788899999987665
No 70
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=6.9e-19 Score=135.63 Aligned_cols=249 Identities=14% Similarity=0.173 Sum_probs=137.5
Q ss_pred CCCCeEEEEccCCCCccc-H-HHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCC-CcEE
Q 023794 4 TEGPVIFCLHGGGYSGLS-F-ALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQP-PSIV 79 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~-~-~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~ 79 (277)
++.|+||++||+.+++.. + +.++..+++ ||+|++++.||+|.|....+.-|+. ...+|+.++++++...-+ .+..
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~a-g~t~Dl~~~v~~i~~~~P~a~l~ 201 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTA-GWTEDLREVVNHIKKRYPQAPLF 201 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeec-CCHHHHHHHHHHHHHhCCCCceE
Confidence 467999999997554443 3 566666555 9999999999999998766533332 346788888888876544 4799
Q ss_pred EEEeChhHHHHHHHHHHhcc--cccceEEEEccCCCcchHHh--HH-HHHHHHhhccchhhHHHHHHHhhcCCccccchh
Q 023794 80 LVGHSMGGSVAVHVAAKKTL--RSLHGLVVVDVVEGTAMASL--IH-MQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDS 154 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~p~--~~v~~lvl~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
.+|.||||++...|..+..+ ..+.++++++|......... .. ....+..... ..+.+....... ....+...
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~--~~l~~~~~~~r~-~~~~~~vd 278 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALT--LNLKRIVLRHRH-TLFEDPVD 278 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHH--HhHHHHHhhhhh-hhhhccch
Confidence 99999999999999988532 24556666655432200000 00 0000000000 000000000000 00000000
Q ss_pred hhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhh----hhhcCCccEEE
Q 023794 155 ARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTI----GQMQGKFQMVV 230 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~----~~~~~~~~~~~ 230 (277)
.............+..............+|+.. .+....+.+|.+|+|+|++.+|++++...+ .+..|++-+++
T Consensus 279 ~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~--aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~ 356 (409)
T KOG1838|consen 279 FDVILKSRSVREFDEALTRPMFGFKSVDEYYKK--ASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVI 356 (409)
T ss_pred hhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhh--cchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEE
Confidence 000000000000000000011112223333332 234566789999999999999999887543 33447888888
Q ss_pred eCCCCCcccccC----h-HHHHHHHHHHHHhcC
Q 023794 231 VRHTGHAIQEDA----P-EEFASLILNFIARNR 258 (277)
Q Consensus 231 ~~~~gH~~~~e~----p-~~~~~~i~~fl~~~~ 258 (277)
-..+||..++|. + .++.+.+.+|+....
T Consensus 357 T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 357 TSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred eCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 889999999987 2 234444777776643
No 71
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.83 E-value=1.2e-18 Score=124.51 Aligned_cols=223 Identities=19% Similarity=0.243 Sum_probs=143.4
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-HhcCCCCcEEEEEe
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKE-MYGEQPPSIVLVGH 83 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~-l~~~~~~~~~lvG~ 83 (277)
.++.++++|=.|+++..|+.+...|.....++++++||.|.--..+ ...+++++++.+...+.. . ..+++.++||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep-~~~di~~Lad~la~el~~~~---~d~P~alfGH 81 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEP-LLTDIESLADELANELLPPL---LDAPFALFGH 81 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCc-ccccHHHHHHHHHHHhcccc---CCCCeeeccc
Confidence 5678999999999999999999999888999999999999775544 367899999998888873 3 3458999999
Q ss_pred ChhHHHHHHHHHHhcc--cccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCcc
Q 023794 84 SMGGSVAVHVAAKKTL--RSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPS 161 (277)
Q Consensus 84 S~Gg~ia~~~a~~~p~--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
||||++|.++|.+.-. ..+.++.+.+...+..... ..... ..-..++..+...+.... .
T Consensus 82 SmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~---------~~i~~-~~D~~~l~~l~~lgG~p~---e------ 142 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG---------KQIHH-LDDADFLADLVDLGGTPP---E------ 142 (244)
T ss_pred chhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc---------CCccC-CCHHHHHHHHHHhCCCCh---H------
Confidence 9999999999987531 1255666665543311000 00000 001112222222111110 0
Q ss_pred ccccCCCcchhHHHHHhHHHHHHHHHHHhhhh-hhhcCCCccEEEEEeCCCCCCchhhhhhhc----CCccEEEeCCCCC
Q 023794 162 TLKYDDSKKCYVYRARLEETEQYWRAWYEGLS-EKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ----GKFQMVVVRHTGH 236 (277)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~----~~~~~~~~~~~gH 236 (277)
+. .+......+...++ ..+.. .+.+. ..-..++||+.++.|++|..+..+.+..+. ...++++++| ||
T Consensus 143 -~l-ed~El~~l~LPilR---AD~~~-~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gH 215 (244)
T COG3208 143 -LL-EDPELMALFLPILR---ADFRA-LESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GH 215 (244)
T ss_pred -Hh-cCHHHHHHHHHHHH---HHHHH-hcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cc
Confidence 00 00000000111111 10100 11111 112578999999999999999988877655 3568999975 99
Q ss_pred cccccChHHHHHHHHHHHHhc
Q 023794 237 AIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 237 ~~~~e~p~~~~~~i~~fl~~~ 257 (277)
|...++.+++.+.|.+.+...
T Consensus 216 Ffl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 216 FFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred eehhhhHHHHHHHHHHHhhhh
Confidence 999999999999999998643
No 72
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.81 E-value=1.2e-19 Score=126.16 Aligned_cols=199 Identities=22% Similarity=0.267 Sum_probs=139.0
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhh-h-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC---CCCcE
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIK-E-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE---QPPSI 78 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~-~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~ 78 (277)
.+.|+++++|+..++....-+.+..+- + +.+|+.+++||+|.|++.+. -+-+.-|-.++++++..+ +..++
T Consensus 76 ~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps----E~GL~lDs~avldyl~t~~~~dktki 151 (300)
T KOG4391|consen 76 SSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS----EEGLKLDSEAVLDYLMTRPDLDKTKI 151 (300)
T ss_pred CCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc----ccceeccHHHHHHHHhcCccCCcceE
Confidence 367999999999888877766666543 3 78999999999999998763 344455666777777533 34589
Q ss_pred EEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhc
Q 023794 79 VLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLS 158 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (277)
+|.|-|+||.+|+.+|++.. +++.++++-++........... .++-....+..+.
T Consensus 152 vlfGrSlGGAvai~lask~~-~ri~~~ivENTF~SIp~~~i~~----------v~p~~~k~i~~lc-------------- 206 (300)
T KOG4391|consen 152 VLFGRSLGGAVAIHLASKNS-DRISAIIVENTFLSIPHMAIPL----------VFPFPMKYIPLLC-------------- 206 (300)
T ss_pred EEEecccCCeeEEEeeccch-hheeeeeeechhccchhhhhhe----------eccchhhHHHHHH--------------
Confidence 99999999999999999988 8999999987644321100000 0000000000000
Q ss_pred CccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcC-----CccEEEeCC
Q 023794 159 IPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQG-----KFQMVVVRH 233 (277)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~-----~~~~~~~~~ 233 (277)
..+.| .-.....++.+|.|+|.|.+|.++|+..+.++.. +.++.++|+
T Consensus 207 ----------------------~kn~~-----~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~ 259 (300)
T KOG4391|consen 207 ----------------------YKNKW-----LSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPD 259 (300)
T ss_pred ----------------------HHhhh-----cchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCC
Confidence 00000 0011225788999999999999999999888763 348999999
Q ss_pred CCCcccccChHHHHHHHHHHHHhcCC
Q 023794 234 TGHAIQEDAPEEFASLILNFIARNRI 259 (277)
Q Consensus 234 ~gH~~~~e~p~~~~~~i~~fl~~~~~ 259 (277)
+.|.-.+-. +-..++|.+||.+...
T Consensus 260 gtHNDT~i~-dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 260 GTHNDTWIC-DGYFQAIEDFLAEVVK 284 (300)
T ss_pred CccCceEEe-ccHHHHHHHHHHHhcc
Confidence 999876643 5688999999998765
No 73
>PLN00021 chlorophyllase
Probab=99.78 E-value=3.6e-17 Score=126.08 Aligned_cols=107 Identities=24% Similarity=0.255 Sum_probs=76.3
Q ss_pred CCCCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHH---HHHHHHHHHHHHh----cCC
Q 023794 3 GTEGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIET---MCNDVLAVLKEMY----GEQ 74 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~---~~~d~~~~l~~l~----~~~ 74 (277)
++..|+|||+||++.+...|..+++.|++ ||.|+++|++|++.+.. ...+++ ..+.+.+.++.+. ..+
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~----~~~i~d~~~~~~~l~~~l~~~l~~~~~~d 124 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG----TDEIKDAAAVINWLSSGLAAVLPEGVRPD 124 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc----hhhHHHHHHHHHHHHhhhhhhcccccccC
Confidence 34679999999999999999999999987 89999999998754321 112222 2222222222221 123
Q ss_pred CCcEEEEEeChhHHHHHHHHHHhcc----cccceEEEEccCCC
Q 023794 75 PPSIVLVGHSMGGSVAVHVAAKKTL----RSLHGLVVVDVVEG 113 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~~~p~----~~v~~lvl~~~~~~ 113 (277)
.++++++|||+||.+|+.+|..++. .++++++++++..+
T Consensus 125 ~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 125 LSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred hhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 4689999999999999999998862 25789998887543
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.78 E-value=2e-17 Score=115.06 Aligned_cols=218 Identities=15% Similarity=0.151 Sum_probs=134.9
Q ss_pred CCCeEEEEccCCCCccc--HHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Q 023794 5 EGPVIFCLHGGGYSGLS--FALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lv 81 (277)
+...+|++||+-++... ...++..|.+ ++.++.+|++|.|+|+..-. .-.....|+|+..+++++......--+++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~-~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY-YGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc-cCcccchHHHHHHHHHHhccCceEEEEEE
Confidence 56789999999877654 4567788877 99999999999999987653 22455566999999999965433233689
Q ss_pred EeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCcc
Q 023794 82 GHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPS 161 (277)
Q Consensus 82 G~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
|||-||-+++.+|.+++ + ++-+|-+++-..... ....+. ......+....++...-+.. -..+.
T Consensus 111 gHSkGg~Vvl~ya~K~~-d-~~~viNcsGRydl~~--------~I~eRl-----g~~~l~~ike~Gfid~~~rk-G~y~~ 174 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYH-D-IRNVINCSGRYDLKN--------GINERL-----GEDYLERIKEQGFIDVGPRK-GKYGY 174 (269)
T ss_pred eecCccHHHHHHHHhhc-C-chheEEcccccchhc--------chhhhh-----cccHHHHHHhCCceecCccc-CCcCc
Confidence 99999999999999997 5 777776665322110 010000 01122233333322111100 00000
Q ss_pred ccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhh--cCCCccEEEEEeCCCCCCchhhhhh---hcCCccEEEeCCCCC
Q 023794 162 TLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKF--LSCPVPKLLLLAGTDRLDRPLTIGQ---MQGKFQMVVVRHTGH 236 (277)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~---~~~~~~~~~~~~~gH 236 (277)
. ......+... ..+..+.. ...+||||-++|..|.++|.+.+.+ ..++.++.++||+.|
T Consensus 175 r---------vt~eSlmdrL-------ntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADH 238 (269)
T KOG4667|consen 175 R---------VTEESLMDRL-------NTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADH 238 (269)
T ss_pred e---------ecHHHHHHHH-------hchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCc
Confidence 0 0000000000 11222222 3457999999999999988776554 558889999999999
Q ss_pred cccccChHHHHHHHHHHHHh
Q 023794 237 AIQEDAPEEFASLILNFIAR 256 (277)
Q Consensus 237 ~~~~e~p~~~~~~i~~fl~~ 256 (277)
.....+ ++.......|.+.
T Consensus 239 nyt~~q-~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 239 NYTGHQ-SQLVSLGLEFIKT 257 (269)
T ss_pred Cccchh-hhHhhhcceeEEe
Confidence 877654 4455555555543
No 75
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=2.1e-16 Score=119.75 Aligned_cols=243 Identities=15% Similarity=0.152 Sum_probs=143.3
Q ss_pred CCeEEEEccCCCCccc-----------HHHHHH---hh-hhcCeEEEEcCCCCC-CCCCCC----C--------CCCcHH
Q 023794 6 GPVIFCLHGGGYSGLS-----------FALAAG---KI-KEKARVVAMDLRGHG-KSSSEN----D--------IDLSIE 57 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~-----------~~~~~~---~l-~~~~~vi~~d~~G~G-~S~~~~----~--------~~~~~~ 57 (277)
...||++|++.++... |+.++. .+ .+.|.||+.|..|.. .|+.+. . ..++++
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~ 130 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIR 130 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHH
Confidence 4579999999885443 444431 12 237999999999864 343332 1 247899
Q ss_pred HHHHHHHHHHHHHhcCCCCcEE-EEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhH--HHHHHHHhhccch-
Q 023794 58 TMCNDVLAVLKEMYGEQPPSIV-LVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLI--HMQKILSTRMQHF- 133 (277)
Q Consensus 58 ~~~~d~~~~l~~l~~~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~- 133 (277)
+++..-+.++++| +++++. +||-|||||.|+.++..|| ++|.+++.+++........+. ...+......+.|
T Consensus 131 D~V~aq~~ll~~L---GI~~l~avvGgSmGGMqaleWa~~yP-d~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n 206 (368)
T COG2021 131 DMVRAQRLLLDAL---GIKKLAAVVGGSMGGMQALEWAIRYP-DRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWN 206 (368)
T ss_pred HHHHHHHHHHHhc---CcceEeeeeccChHHHHHHHHHHhCh-HHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCcc
Confidence 9999889999999 777777 9999999999999999999 999999999987655443321 1111111111111
Q ss_pred ---------h----hHHHHHHHhhcCCccccchhhhhcCcc-----ccccC-CCcchhHHHH-H-------hHHH--HHH
Q 023794 134 ---------S----SIEKAIEWSVKGGSLRNLDSARLSIPS-----TLKYD-DSKKCYVYRA-R-------LEET--EQY 184 (277)
Q Consensus 134 ---------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~-~-------~~~~--~~~ 184 (277)
+ ...+.+..+.. +........+.. ..... .......+.. . ++.. ...
T Consensus 207 ~G~Y~~~~~P~~GL~~AR~l~~ltY----rS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~l 282 (368)
T COG2021 207 GGDYYEGTQPERGLRLARMLAHLTY----RSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYL 282 (368)
T ss_pred CCCccCCCCcchhHHHHHHHHHHHc----cCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHH
Confidence 0 11111111110 000000000000 00000 0000000000 0 0000 000
Q ss_pred HHHH--------HhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhh---cCCcc-EEEeC-CCCCcccccChHHHHHHHH
Q 023794 185 WRAW--------YEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQM---QGKFQ-MVVVR-HTGHAIQEDAPEEFASLIL 251 (277)
Q Consensus 185 ~~~~--------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~---~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~ 251 (277)
.+.+ ..++...+..+++|++++.-+.|.+.|++..++. ++.+. +++|+ ..||..++...+.+...|.
T Consensus 283 t~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~ 362 (368)
T COG2021 283 TRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIR 362 (368)
T ss_pred HHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHH
Confidence 0000 1244556889999999999999999998876554 34444 65554 4799999999999999999
Q ss_pred HHHHh
Q 023794 252 NFIAR 256 (277)
Q Consensus 252 ~fl~~ 256 (277)
.||+.
T Consensus 363 ~fL~~ 367 (368)
T COG2021 363 KFLAL 367 (368)
T ss_pred HHhhc
Confidence 99975
No 76
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.77 E-value=1.5e-16 Score=121.81 Aligned_cols=108 Identities=20% Similarity=0.319 Sum_probs=78.7
Q ss_pred CCCeEEEEccCCCCcccHHHH--HHhhhh--cCeEEEEcC--CCCCCCCCCC-------------------CCCCcHH-H
Q 023794 5 EGPVIFCLHGGGYSGLSFALA--AGKIKE--KARVVAMDL--RGHGKSSSEN-------------------DIDLSIE-T 58 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~--~~~l~~--~~~vi~~d~--~G~G~S~~~~-------------------~~~~~~~-~ 58 (277)
..|+|+|+||++++...|... ...+.. ++.|+++|. +|+|.+.... ...+... .
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 468999999999998888542 334443 899999998 5555332100 0012333 3
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 59 MCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 59 ~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
+++++..+++.....+.++++++||||||.+|+.++.++| +.+++++++++...
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p-~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNP-DRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCc-ccceEEEEECCccC
Confidence 4677777777743335678999999999999999999999 99999999988654
No 77
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.77 E-value=2.1e-16 Score=118.25 Aligned_cols=102 Identities=23% Similarity=0.339 Sum_probs=84.8
Q ss_pred CeEEEEccCCCCcccHHHHHHhhhhc-CeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 7 PVIFCLHGGGYSGLSFALAAGKIKEK-ARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
++|+|+|+.+++...|..+++.|... +.|+.++.+|.+.... ...+++++++...+.|......+ +++|+|||+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~---~~~si~~la~~y~~~I~~~~~~g--p~~L~G~S~ 75 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP---PPDSIEELASRYAEAIRARQPEG--PYVLAGWSF 75 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH---EESSHHHHHHHHHHHHHHHTSSS--SEEEEEETH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC---CCCCHHHHHHHHHHHhhhhCCCC--CeeehccCc
Confidence 47999999999999999999999986 9999999999983332 24699999999999998874432 899999999
Q ss_pred hHHHHHHHHHHhc--ccccceEEEEccCCC
Q 023794 86 GGSVAVHVAAKKT--LRSLHGLVVVDVVEG 113 (277)
Q Consensus 86 Gg~ia~~~a~~~p--~~~v~~lvl~~~~~~ 113 (277)
||.+|+++|.+-- ...+..++++++.+.
T Consensus 76 Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 76 GGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred cHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 9999999998732 145899999997654
No 78
>PLN02442 S-formylglutathione hydrolase
Probab=99.76 E-value=1.3e-16 Score=122.42 Aligned_cols=110 Identities=18% Similarity=0.284 Sum_probs=74.6
Q ss_pred CCCCCeEEEEccCCCCcccHHH---HHHhhhh-cCeEEEEcCCCCCC-----CCC-------------CCCC--CCc-HH
Q 023794 3 GTEGPVIFCLHGGGYSGLSFAL---AAGKIKE-KARVVAMDLRGHGK-----SSS-------------ENDI--DLS-IE 57 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~---~~~~l~~-~~~vi~~d~~G~G~-----S~~-------------~~~~--~~~-~~ 57 (277)
+...|+|+|+||++++...|.. +...+.. ++.|+.+|..++|. +.. .... .+. ..
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 3456999999999988877743 3344444 89999999877661 110 0000 001 12
Q ss_pred HHHHHHHHHHHHHh-cCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 58 TMCNDVLAVLKEMY-GEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 58 ~~~~d~~~~l~~l~-~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
...+++...++... ..+.++++++||||||..|+.++.++| +++++++.+++...
T Consensus 124 ~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p-~~~~~~~~~~~~~~ 179 (283)
T PLN02442 124 YVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNP-DKYKSVSAFAPIAN 179 (283)
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCc-hhEEEEEEECCccC
Confidence 23344444444432 226678999999999999999999999 99999999988654
No 79
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.76 E-value=6.7e-17 Score=121.36 Aligned_cols=107 Identities=15% Similarity=0.150 Sum_probs=93.7
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh----------cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE----------KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQ 74 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~----------~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 74 (277)
.--||+++|||+++-+.|-.+++.|.+ -|.||++.+||+|.|+.+....++..+.|.-++.++-.| +
T Consensus 151 ~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRL---g 227 (469)
T KOG2565|consen 151 KVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRL---G 227 (469)
T ss_pred cccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHh---C
Confidence 345899999999999999999998853 278999999999999998877899999999999999999 7
Q ss_pred CCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcc
Q 023794 75 PPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTA 115 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~ 115 (277)
.+++.+-|-.||+.|+..+|..+| +.|.|+=+-.+.....
T Consensus 228 ~nkffiqGgDwGSiI~snlasLyP-enV~GlHlnm~~~~s~ 267 (469)
T KOG2565|consen 228 YNKFFIQGGDWGSIIGSNLASLYP-ENVLGLHLNMCFVNSP 267 (469)
T ss_pred cceeEeecCchHHHHHHHHHhhcc-hhhhHhhhcccccCCc
Confidence 889999999999999999999999 9999987765544333
No 80
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.76 E-value=1.9e-17 Score=131.31 Aligned_cols=108 Identities=17% Similarity=0.186 Sum_probs=85.0
Q ss_pred CCCCeEEEEccCCCCc--ccHHH-HHHhhh---hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHh---cCC
Q 023794 4 TEGPVIFCLHGGGYSG--LSFAL-AAGKIK---EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMY---GEQ 74 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~--~~~~~-~~~~l~---~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~---~~~ 74 (277)
.++|++|++||++.+. ..|.. +.+.|. .+|+||++|++|+|.|..+.. .......++++.++++.|. +.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a-~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS-AAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc-cccHHHHHHHHHHHHHHHHHhhCCC
Confidence 4679999999998754 34664 555543 269999999999998865543 2344677788888888763 224
Q ss_pred CCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 75 PPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
.++++|+||||||.+|..++..+| ++|.++++++|+.+
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p-~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTK-HKVNRITGLDPAGP 155 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCC-cceeEEEEEcCCCC
Confidence 678999999999999999999998 99999999999753
No 81
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.75 E-value=2.5e-17 Score=121.67 Aligned_cols=192 Identities=18% Similarity=0.175 Sum_probs=116.4
Q ss_pred HHHHHHhhhh-cCeEEEEcCCCCCCCCCC---CCCCCcHHHHHHHHHHHHHHHhcC---CCCcEEEEEeChhHHHHHHHH
Q 023794 22 FALAAGKIKE-KARVVAMDLRGHGKSSSE---NDIDLSIETMCNDVLAVLKEMYGE---QPPSIVLVGHSMGGSVAVHVA 94 (277)
Q Consensus 22 ~~~~~~~l~~-~~~vi~~d~~G~G~S~~~---~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~lvG~S~Gg~ia~~~a 94 (277)
|......|++ ||.|+.+|+||.+..... ......-...++|+.+.++.+... +.+++.++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 4556677754 999999999998743211 011223345577888888877543 457999999999999999999
Q ss_pred HHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccccccCCCcchhHH
Q 023794 95 AKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVY 174 (277)
Q Consensus 95 ~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (277)
..+| +++++++..++........... .. ............ .. ....+
T Consensus 83 ~~~~-~~f~a~v~~~g~~d~~~~~~~~--------~~----~~~~~~~~~~~~------------------~~--~~~~~ 129 (213)
T PF00326_consen 83 TQHP-DRFKAAVAGAGVSDLFSYYGTT--------DI----YTKAEYLEYGDP------------------WD--NPEFY 129 (213)
T ss_dssp HHTC-CGSSEEEEESE-SSTTCSBHHT--------CC----HHHGHHHHHSST------------------TT--SHHHH
T ss_pred cccc-eeeeeeeccceecchhcccccc--------cc----cccccccccCcc------------------ch--hhhhh
Confidence 9999 9999999998865432111000 00 000000000000 00 00000
Q ss_pred HHHhHHHHHHHHHHHhhhhhhhcC--CCccEEEEEeCCCCCCchhhhhhhc-------CCccEEEeCCCCCccc-ccChH
Q 023794 175 RARLEETEQYWRAWYEGLSEKFLS--CPVPKLLLLAGTDRLDRPLTIGQMQ-------GKFQMVVVRHTGHAIQ-EDAPE 244 (277)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~--i~~P~l~i~g~~D~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~-~e~p~ 244 (277)
... .....+.+ +++|+|+++|++|..++.....++. ..++++++|++||.+. .+...
T Consensus 130 -----------~~~--s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~ 196 (213)
T PF00326_consen 130 -----------REL--SPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRR 196 (213)
T ss_dssp -----------HHH--HHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHH
T ss_pred -----------hhh--ccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHH
Confidence 000 00111133 7899999999999999887655543 3579999999999555 34446
Q ss_pred HHHHHHHHHHHhcCC
Q 023794 245 EFASLILNFIARNRI 259 (277)
Q Consensus 245 ~~~~~i~~fl~~~~~ 259 (277)
+..+.+.+|+++...
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 788999999988653
No 82
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.72 E-value=4.2e-16 Score=131.65 Aligned_cols=206 Identities=19% Similarity=0.194 Sum_probs=123.4
Q ss_pred CeEEEEccCCCCccc--HHHHHHhhhh-cCeEEEEcCCCCCC---CCCC--C--CCCCcHHHHHHHHHHHHHHHhcCCCC
Q 023794 7 PVIFCLHGGGYSGLS--FALAAGKIKE-KARVVAMDLRGHGK---SSSE--N--DIDLSIETMCNDVLAVLKEMYGEQPP 76 (277)
Q Consensus 7 p~vv~~HG~~~~~~~--~~~~~~~l~~-~~~vi~~d~~G~G~---S~~~--~--~~~~~~~~~~~d~~~~l~~l~~~~~~ 76 (277)
|+||++||++..... |....+.|+. ||.|+.+|+||.+. .-.. . -....++++.+.+. ++......+.+
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ 473 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPE 473 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChH
Confidence 899999999755444 5566677765 99999999997533 2111 1 01234444444444 44444444557
Q ss_pred cEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhh
Q 023794 77 SIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSAR 156 (277)
Q Consensus 77 ~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (277)
++.++|||+||.+++..+...| .+++.+...+........ .... ........ ..
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~--~f~a~~~~~~~~~~~~~~-------~~~~----------------~~~~~~~~-~~ 527 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP--RFKAAVAVAGGVDWLLYF-------GEST----------------EGLRFDPE-EN 527 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc--hhheEEeccCcchhhhhc-------cccc----------------hhhcCCHH-Hh
Confidence 9999999999999999999886 566666555432111000 0000 00000000 00
Q ss_pred hcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc-------CCccEE
Q 023794 157 LSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ-------GKFQMV 229 (277)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-------~~~~~~ 229 (277)
...+. . ....+..+ .-.....++++|+|+|||++|..++.+....+. ..++++
T Consensus 528 ~~~~~----~-~~~~~~~~---------------sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~ 587 (620)
T COG1506 528 GGGPP----E-DREKYEDR---------------SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELV 587 (620)
T ss_pred CCCcc----c-ChHHHHhc---------------ChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEE
Confidence 00000 0 00000000 011123789999999999999998877655543 456999
Q ss_pred EeCCCCCcccc-cChHHHHHHHHHHHHhcCC
Q 023794 230 VVRHTGHAIQE-DAPEEFASLILNFIARNRI 259 (277)
Q Consensus 230 ~~~~~gH~~~~-e~p~~~~~~i~~fl~~~~~ 259 (277)
++|+.||.+.. ++-..+.+.+.+|++++..
T Consensus 588 ~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 588 VFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred EeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999887 4456788888899887653
No 83
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.71 E-value=5.9e-16 Score=114.06 Aligned_cols=108 Identities=13% Similarity=0.144 Sum_probs=75.5
Q ss_pred CCCCeEEEEccCCCCcccHH---HHHHhhhh-cCeEEEEcCCCCCCCCCCCCC---C--CcHHHHHHHHHHHHHHHhc--
Q 023794 4 TEGPVIFCLHGGGYSGLSFA---LAAGKIKE-KARVVAMDLRGHGKSSSENDI---D--LSIETMCNDVLAVLKEMYG-- 72 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~---~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~---~--~~~~~~~~d~~~~l~~l~~-- 72 (277)
+..|+||++||++++...+. .+...+.+ +|.|+++|.+|++.+...... . ........++.++++.+..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 35799999999998877664 24444444 899999999998754321100 0 0011234445555555432
Q ss_pred -CCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 73 -EQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 73 -~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
.+.++++|+|||+||.+++.++..+| +.+.+++.+++..
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p-~~~~~~~~~~g~~ 130 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYP-DVFAGGASNAGLP 130 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCc-hhheEEEeecCCc
Confidence 24468999999999999999999999 9999998888654
No 84
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.70 E-value=1.2e-16 Score=121.63 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=82.6
Q ss_pred CCCCCeEEEEccCCCCc-ccHHH-HHHh-hhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC---CC
Q 023794 3 GTEGPVIFCLHGGGYSG-LSFAL-AAGK-IKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE---QP 75 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~-~~~~~-~~~~-l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~ 75 (277)
++++|++|++||++++. ..|.. +... +.. +++|+++|+++++.+..+ ....+.+..++++.++++.+... +.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~~ 111 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLSL 111 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCCh
Confidence 34689999999999887 66754 4443 443 799999999988433211 11345666677788888776432 45
Q ss_pred CcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
++++++||||||.+|..++..+| ++|.++++++|+..
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~~~~-~~v~~iv~LDPa~p 148 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGKRLN-GKLGRITGLDPAGP 148 (275)
T ss_pred HHEEEEEecHHHHHHHHHHHHhc-CccceeEEecCCcc
Confidence 68999999999999999999999 89999999998653
No 85
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.68 E-value=4.8e-15 Score=101.63 Aligned_cols=169 Identities=20% Similarity=0.301 Sum_probs=118.4
Q ss_pred CCCeEEEEccCC-----CCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCC--
Q 023794 5 EGPVIFCLHGGG-----YSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPP-- 76 (277)
Q Consensus 5 ~~p~vv~~HG~~-----~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~-- 76 (277)
..|..|.+|--+ .+...-..++..|.+ ||.++.+|+||.|.|...-+.. +-+ .+|..+.+++++.+.++
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G--iGE-~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG--IGE-LEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC--cch-HHHHHHHHHHHHhhCCCch
Confidence 457778888632 222334556667766 9999999999999999875433 333 34666777777654433
Q ss_pred cEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhh
Q 023794 77 SIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSAR 156 (277)
Q Consensus 77 ~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (277)
.+.|.|+|+|+.|++.+|.+.| + +...+.+.+.....
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~-e-~~~~is~~p~~~~~----------------------------------------- 140 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRP-E-ILVFISILPPINAY----------------------------------------- 140 (210)
T ss_pred hhhhcccchHHHHHHHHHHhcc-c-ccceeeccCCCCch-----------------------------------------
Confidence 3468999999999999999987 4 34444433322100
Q ss_pred hcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcC--CccEEEeCCC
Q 023794 157 LSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQG--KFQMVVVRHT 234 (277)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~--~~~~~~~~~~ 234 (277)
+ ...+..+++|.++|+|+.|.+++....-++.. ..++++++++
T Consensus 141 ---------d--------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~~~~i~i~~a 185 (210)
T COG2945 141 ---------D--------------------------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIKITVITIPGA 185 (210)
T ss_pred ---------h--------------------------hhhccCCCCCceeEecChhhhhcHHHHHHhhcCCCCceEEecCC
Confidence 0 00115678999999999999888877666664 4579999999
Q ss_pred CCcccccChHHHHHHHHHHHH
Q 023794 235 GHAIQEDAPEEFASLILNFIA 255 (277)
Q Consensus 235 gH~~~~e~p~~~~~~i~~fl~ 255 (277)
+||++-. -..+.+.+.+||.
T Consensus 186 ~HFF~gK-l~~l~~~i~~~l~ 205 (210)
T COG2945 186 DHFFHGK-LIELRDTIADFLE 205 (210)
T ss_pred Cceeccc-HHHHHHHHHHHhh
Confidence 9988764 5779999999995
No 86
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.67 E-value=1.5e-15 Score=112.14 Aligned_cols=177 Identities=21% Similarity=0.255 Sum_probs=104.2
Q ss_pred CCCCCeEEEEccCCCCcccHHHHHHh-hh-hcCeEEEEcCCC------CCC---CCC-----CCCC---CCcHHHHHHHH
Q 023794 3 GTEGPVIFCLHGGGYSGLSFALAAGK-IK-EKARVVAMDLRG------HGK---SSS-----ENDI---DLSIETMCNDV 63 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~~~~~-l~-~~~~vi~~d~~G------~G~---S~~-----~~~~---~~~~~~~~~d~ 63 (277)
+...++|||+||+|.+...|..+... +. .+..++.++-|- .|. +-- .... ...+++.++.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 45678999999999999777665552 22 256666665431 222 110 1110 12344455566
Q ss_pred HHHHHHHhc--CCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHH
Q 023794 64 LAVLKEMYG--EQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIE 141 (277)
Q Consensus 64 ~~~l~~l~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (277)
.++++.... .+.++++|.|+|.||++|+.++.++| ..+.+++.+++.......
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p-~~~~gvv~lsG~~~~~~~------------------------ 145 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYP-EPLAGVVALSGYLPPESE------------------------ 145 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTS-STSSEEEEES---TTGCC------------------------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcC-cCcCEEEEeecccccccc------------------------
Confidence 667665432 24568999999999999999999999 899999999863321100
Q ss_pred HhhcCCccccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhh
Q 023794 142 WSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQ 221 (277)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 221 (277)
.. . ... ..-++|+++++|.+|+++|.+..++
T Consensus 146 ----------~~-------~------------------------------~~~--~~~~~pi~~~hG~~D~vvp~~~~~~ 176 (216)
T PF02230_consen 146 ----------LE-------D------------------------------RPE--ALAKTPILIIHGDEDPVVPFEWAEK 176 (216)
T ss_dssp ----------CH-------C------------------------------CHC--CCCTS-EEEEEETT-SSSTHHHHHH
T ss_pred ----------cc-------c------------------------------ccc--ccCCCcEEEEecCCCCcccHHHHHH
Confidence 00 0 000 1126899999999999998765443
Q ss_pred hc-------CCccEEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 222 MQ-------GKFQMVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 222 ~~-------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
.. .++++..+++.||... .+..+.+.+||+++
T Consensus 177 ~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 177 TAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 32 4678999999999764 45566688888763
No 87
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.67 E-value=2.4e-15 Score=111.42 Aligned_cols=176 Identities=20% Similarity=0.219 Sum_probs=112.1
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCC-CCCCC-CCCC--------cHHHHHHHHHHHHHHHhcC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGK-SSSEN-DIDL--------SIETMCNDVLAVLKEMYGE 73 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~-S~~~~-~~~~--------~~~~~~~d~~~~l~~l~~~ 73 (277)
..|.||++|++.+-....+.+++.|++ ||.|+++|+-+-.. ..... .... ..+...+++.+.++.+...
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 578999999987766667778888887 99999999864433 11111 0000 1345677888888888765
Q ss_pred C---CCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccc
Q 023794 74 Q---PPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLR 150 (277)
Q Consensus 74 ~---~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (277)
. .+++.++|+||||.+++.+|... ..+++.+..-+....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~--~~~~a~v~~yg~~~~------------------------------------ 134 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD--PRVDAAVSFYGGSPP------------------------------------ 134 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT--TTSSEEEEES-SSSG------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc--cccceEEEEcCCCCC------------------------------------
Confidence 3 46999999999999999999876 468888876540000
Q ss_pred cchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhh-------c
Q 023794 151 NLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQM-------Q 223 (277)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~-------~ 223 (277)
........++++|+++++|++|+.++.+....+ -
T Consensus 135 ---------------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 175 (218)
T PF01738_consen 135 ---------------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAG 175 (218)
T ss_dssp ---------------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTT
T ss_pred ---------------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcC
Confidence 000111266789999999999999887753332 2
Q ss_pred CCccEEEeCCCCCcccccCh--------HHHHHHHHHHHHhc
Q 023794 224 GKFQMVVVRHTGHAIQEDAP--------EEFASLILNFIARN 257 (277)
Q Consensus 224 ~~~~~~~~~~~gH~~~~e~p--------~~~~~~i~~fl~~~ 257 (277)
..++++++++++|.+..... ++-.+.+.+||++.
T Consensus 176 ~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 176 VDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 56799999999998875532 34556777787654
No 88
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.67 E-value=4e-14 Score=109.46 Aligned_cols=212 Identities=20% Similarity=0.158 Sum_probs=119.1
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCC-CCCCC------------------CCCCcHHHHHHHHH
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGK-SSSEN------------------DIDLSIETMCNDVL 64 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~-S~~~~------------------~~~~~~~~~~~d~~ 64 (277)
+.-|.||.+||.++....|......-..||.|+.+|.||+|. +.... ...+-+..+..|..
T Consensus 81 ~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ 160 (320)
T PF05448_consen 81 GKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAV 160 (320)
T ss_dssp SSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHH
T ss_pred CCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHH
Confidence 355889999999998888877666666799999999999993 31100 01223445667877
Q ss_pred HHHHHHhcC---CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHH
Q 023794 65 AVLKEMYGE---QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIE 141 (277)
Q Consensus 65 ~~l~~l~~~---~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (277)
..++.+... +.+++.+.|.|+||.+++.+|+..| +|++++...|............ .....+..+.....
T Consensus 161 ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~--rv~~~~~~vP~l~d~~~~~~~~-----~~~~~y~~~~~~~~ 233 (320)
T PF05448_consen 161 RAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP--RVKAAAADVPFLCDFRRALELR-----ADEGPYPEIRRYFR 233 (320)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS--T-SEEEEESESSSSHHHHHHHT-------STTTHHHHHHHH
T ss_pred HHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc--cccEEEecCCCccchhhhhhcC-----CccccHHHHHHHHh
Confidence 777777643 3468999999999999999999985 6999999887543222111000 00011111111111
Q ss_pred HhhcCCccccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhh
Q 023794 142 WSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQ 221 (277)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 221 (277)
..-... ......+. ... +-|...-...|++|+++-.|-.|+++|+...-.
T Consensus 234 ~~d~~~------------------------~~~~~v~~-~L~-----Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA 283 (320)
T PF05448_consen 234 WRDPHH------------------------EREPEVFE-TLS-----YFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFA 283 (320)
T ss_dssp HHSCTH------------------------CHHHHHHH-HHH-----TT-HHHHGGG--SEEEEEEETT-SSS-HHHHHH
T ss_pred ccCCCc------------------------ccHHHHHH-HHh-----hhhHHHHHHHcCCCEEEEEecCCCCCCchhHHH
Confidence 000000 00000000 000 123333347899999999999999999987655
Q ss_pred hc----CCccEEEeCCCCCcccccChHHH-HHHHHHHHHh
Q 023794 222 MQ----GKFQMVVVRHTGHAIQEDAPEEF-ASLILNFIAR 256 (277)
Q Consensus 222 ~~----~~~~~~~~~~~gH~~~~e~p~~~-~~~i~~fl~~ 256 (277)
.+ ...++.+++..|| |.+.++ .+...+||.+
T Consensus 284 ~yN~i~~~K~l~vyp~~~H----e~~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 284 AYNAIPGPKELVVYPEYGH----EYGPEFQEDKQLNFLKE 319 (320)
T ss_dssp HHCC--SSEEEEEETT--S----STTHHHHHHHHHHHHHH
T ss_pred HHhccCCCeeEEeccCcCC----CchhhHHHHHHHHHHhc
Confidence 44 3458999999999 555555 7778888876
No 89
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.66 E-value=6.5e-15 Score=110.13 Aligned_cols=235 Identities=15% Similarity=0.219 Sum_probs=92.6
Q ss_pred CCCeEEEEccCCCCc---ccHHHHHHhhhh-cCeEEEEcCC----CCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC---
Q 023794 5 EGPVIFCLHGGGYSG---LSFALAAGKIKE-KARVVAMDLR----GHGKSSSENDIDLSIETMCNDVLAVLKEMYGE--- 73 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~---~~~~~~~~~l~~-~~~vi~~d~~----G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--- 73 (277)
....||||-|++... .....+++.|.. ++.|+-+-++ |+| ..++++-++||.+++++|+..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G--------~~SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWG--------TSSLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS---------S--HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcC--------cchhhhHHHHHHHHHHHHHHhhcc
Confidence 345799999986543 446778888875 8999999875 444 347888899999999988755
Q ss_pred --CCCcEEEEEeChhHHHHHHHHHHhc----ccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCC
Q 023794 74 --QPPSIVLVGHSMGGSVAVHVAAKKT----LRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGG 147 (277)
Q Consensus 74 --~~~~~~lvG~S~Gg~ia~~~a~~~p----~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (277)
+.++|+|+|||.|+.-+++|+.... ...|.++||.+|...........-. ...+.........+...+
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~------~~~~~~~v~~A~~~i~~g 177 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE------REAYEELVALAKELIAEG 177 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---------HHHHHHHHHHHHHCT
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc------hHHHHHHHHHHHHHHHcC
Confidence 4579999999999999999998753 1569999999997654322111000 000111111111122222
Q ss_pred ccccchhhhhcCccccccCCCcchhHHHHH--hHHHHHHHHHHH--hhhhhhhcCCCccEEEEEeCCCCCCchhh-----
Q 023794 148 SLRNLDSARLSIPSTLKYDDSKKCYVYRAR--LEETEQYWRAWY--EGLSEKFLSCPVPKLLLLAGTDRLDRPLT----- 218 (277)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~~~~----- 218 (277)
....+..... .....+......+.+... ...-..++...+ +.+...+..+..|+|++.+++|..+|...
T Consensus 178 ~~~~~lp~~~--~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~L 255 (303)
T PF08538_consen 178 KGDEILPREF--TPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEAL 255 (303)
T ss_dssp -TT-GG------GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-----------
T ss_pred CCCceeeccc--cccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccc
Confidence 1111111000 000000111111111111 111222233222 23556778899999999999999876542
Q ss_pred hhhhc---C----CccEEEeCCCCCcccccCh----HHHHHHHHHHHH
Q 023794 219 IGQMQ---G----KFQMVVVRHTGHAIQEDAP----EEFASLILNFIA 255 (277)
Q Consensus 219 ~~~~~---~----~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~ 255 (277)
++++. + ...-.+||||+|.+--+.. +++.+.+..||+
T Consensus 256 l~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 256 LERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 12221 1 1135689999999875443 368888888875
No 90
>PRK10162 acetyl esterase; Provisional
Probab=99.63 E-value=8.8e-14 Score=108.61 Aligned_cols=104 Identities=18% Similarity=0.196 Sum_probs=71.1
Q ss_pred CCCeEEEEccCC---CCcccHHHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHH---HHHhcCCCC
Q 023794 5 EGPVIFCLHGGG---YSGLSFALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVL---KEMYGEQPP 76 (277)
Q Consensus 5 ~~p~vv~~HG~~---~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l---~~l~~~~~~ 76 (277)
..|+||++||++ ++...|..++..|++ ++.|+.+|+|....... ...+++..+.+..+. +.+ +.+.+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~----p~~~~D~~~a~~~l~~~~~~~-~~d~~ 154 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARF----PQAIEEIVAVCCYFHQHAEDY-GINMS 154 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCC----CCcHHHHHHHHHHHHHhHHHh-CCChh
Confidence 468999999976 566678888888875 89999999996543221 223333332222222 222 12346
Q ss_pred cEEEEEeChhHHHHHHHHHHhc-----ccccceEEEEccCCC
Q 023794 77 SIVLVGHSMGGSVAVHVAAKKT-----LRSLHGLVVVDVVEG 113 (277)
Q Consensus 77 ~~~lvG~S~Gg~ia~~~a~~~p-----~~~v~~lvl~~~~~~ 113 (277)
+++++|+|+||.+|+.++.... ..++.+++++.+...
T Consensus 155 ~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 155 RIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 8999999999999999987531 146899999988654
No 91
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.63 E-value=1.1e-13 Score=98.22 Aligned_cols=180 Identities=21% Similarity=0.212 Sum_probs=112.3
Q ss_pred EEEEccCCCCcccHHH--HHHhhhh---cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Q 023794 9 IFCLHGGGYSGLSFAL--AAGKIKE---KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGH 83 (277)
Q Consensus 9 vv~~HG~~~~~~~~~~--~~~~l~~---~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~ 83 (277)
|+++||+.++...... +.+.+.+ ...++++|++ ...++..+.+.++++.. ..+.+.|+|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~---~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEEL---KPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhC---CCCCeEEEEE
Confidence 7999999999988763 4455654 3556666665 35666677788888877 4445999999
Q ss_pred ChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCcccc
Q 023794 84 SMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTL 163 (277)
Q Consensus 84 S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (277)
||||..|..+|.+++ +.+ ||++|+....... . ..+......... .
T Consensus 67 SlGG~~A~~La~~~~---~~a-vLiNPav~p~~~l----~------------------~~iG~~~~~~~~---------e 111 (187)
T PF05728_consen 67 SLGGFYATYLAERYG---LPA-VLINPAVRPYELL----Q------------------DYIGEQTNPYTG---------E 111 (187)
T ss_pred ChHHHHHHHHHHHhC---CCE-EEEcCCCCHHHHH----H------------------HhhCccccCCCC---------c
Confidence 999999999999885 444 8888865432111 0 001000000000 0
Q ss_pred ccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCCCCcccccCh
Q 023794 164 KYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHTGHAIQEDAP 243 (277)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p 243 (277)
. +.+.. ..... ...+......-+.+++++.+..|.+.+.........++..++.+|++|-+. +=
T Consensus 112 ~-------~~~~~------~~~~~-l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~~~~~~~~i~~ggdH~f~--~f 175 (187)
T PF05728_consen 112 S-------YELTE------EHIEE-LKALEVPYPTNPERYLVLLQTGDEVLDYREAVAKYRGCAQIIEEGGDHSFQ--DF 175 (187)
T ss_pred c-------ceech------Hhhhh-cceEeccccCCCccEEEEEecCCcccCHHHHHHHhcCceEEEEeCCCCCCc--cH
Confidence 0 00000 00000 001111113446789999999999998887777777777778888899765 34
Q ss_pred HHHHHHHHHHH
Q 023794 244 EEFASLILNFI 254 (277)
Q Consensus 244 ~~~~~~i~~fl 254 (277)
++....|.+|+
T Consensus 176 ~~~l~~i~~f~ 186 (187)
T PF05728_consen 176 EEYLPQIIAFL 186 (187)
T ss_pred HHHHHHHHHhh
Confidence 66777787776
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=99.59 E-value=5.9e-14 Score=100.78 Aligned_cols=172 Identities=17% Similarity=0.182 Sum_probs=109.3
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCC--CCCC---CCCCCCCCcHHHHHHHH---HHHHHHHh---c
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRG--HGKS---SSENDIDLSIETMCNDV---LAVLKEMY---G 72 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G--~G~S---~~~~~~~~~~~~~~~d~---~~~l~~l~---~ 72 (277)
+..|+||++||+|++...+-++...+..++.++.+.=+- .|.- .......++.+++..+. .++++.+. +
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g 95 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG 95 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 355789999999999988887666655566665542210 0100 00011133344443333 23333222 2
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccc
Q 023794 73 EQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNL 152 (277)
Q Consensus 73 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (277)
.+.++++++|+|-||++++.+...+| ..+++++++++........
T Consensus 96 i~~~~ii~~GfSqGA~ial~~~l~~~-~~~~~ail~~g~~~~~~~~---------------------------------- 140 (207)
T COG0400 96 IDSSRIILIGFSQGANIALSLGLTLP-GLFAGAILFSGMLPLEPEL---------------------------------- 140 (207)
T ss_pred CChhheEEEecChHHHHHHHHHHhCc-hhhccchhcCCcCCCCCcc----------------------------------
Confidence 24579999999999999999999999 9999999988743211100
Q ss_pred hhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc-------CC
Q 023794 153 DSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ-------GK 225 (277)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-------~~ 225 (277)
.-..-..|+++++|+.|++++.....++. -+
T Consensus 141 ------------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~ 178 (207)
T COG0400 141 ------------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGAD 178 (207)
T ss_pred ------------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCC
Confidence 00223589999999999999877655443 35
Q ss_pred ccEEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 226 FQMVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 226 ~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
++...++ .||....+ -.+.+.+|+.+.
T Consensus 179 v~~~~~~-~GH~i~~e----~~~~~~~wl~~~ 205 (207)
T COG0400 179 VEVRWHE-GGHEIPPE----ELEAARSWLANT 205 (207)
T ss_pred EEEEEec-CCCcCCHH----HHHHHHHHHHhc
Confidence 6788887 79966554 455556677653
No 93
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.59 E-value=5.1e-15 Score=103.92 Aligned_cols=153 Identities=14% Similarity=0.217 Sum_probs=94.8
Q ss_pred EEEEccCCCCc-ccHHH-HHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChh
Q 023794 9 IFCLHGGGYSG-LSFAL-AAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMG 86 (277)
Q Consensus 9 vv~~HG~~~~~-~~~~~-~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~G 86 (277)
|+++||++++. ..|.. +...|...++|-..|+- ..+.+++...+.+.+..+ .++++|||||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~~-----------~P~~~~W~~~l~~~i~~~----~~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDWD-----------NPDLDEWVQALDQAIDAI----DEPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--T-----------S--HHHHHHHHHHCCHC-----TTTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEeccccC-----------CCCHHHHHHHHHHHHhhc----CCCeEEEEeCHH
Confidence 68999987664 44654 45566656666666651 236777777777776655 346999999999
Q ss_pred HHHHHHHH-HHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCcccccc
Q 023794 87 GSVAVHVA-AKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKY 165 (277)
Q Consensus 87 g~ia~~~a-~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (277)
|..+++++ .... .+|.+++|++++....... .......+
T Consensus 66 c~~~l~~l~~~~~-~~v~g~lLVAp~~~~~~~~--------------------------~~~~~~~f------------- 105 (171)
T PF06821_consen 66 CLTALRWLAEQSQ-KKVAGALLVAPFDPDDPEP--------------------------FPPELDGF------------- 105 (171)
T ss_dssp HHHHHHHHHHTCC-SSEEEEEEES--SCGCHHC--------------------------CTCGGCCC-------------
T ss_pred HHHHHHHHhhccc-ccccEEEEEcCCCcccccc--------------------------hhhhcccc-------------
Confidence 99999999 4455 8999999999864320000 00000000
Q ss_pred CCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcC--CccEEEeCCCCCcccccC
Q 023794 166 DDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQG--KFQMVVVRHTGHAIQEDA 242 (277)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~ 242 (277)
. .. ....+++|.++|.+++|++++.+...++.. +++++.++++||+...+.
T Consensus 106 ~------------------------~~--p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 106 T------------------------PL--PRDPLPFPSIVIASDNDPYVPFERAQRLAQRLGAELIILGGGGHFNAASG 158 (171)
T ss_dssp T------------------------TS--HCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT-EEEEETS-TTSSGGGT
T ss_pred c------------------------cC--cccccCCCeEEEEcCCCCccCHHHHHHHHHHcCCCeEECCCCCCcccccC
Confidence 0 00 002234667999999999999988887775 679999999999987654
No 94
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.59 E-value=2.2e-14 Score=111.86 Aligned_cols=213 Identities=13% Similarity=0.081 Sum_probs=109.1
Q ss_pred CCCeEEEEccCCCCcccH-HHHHHhhh-hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSF-ALAAGKIK-EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~-~~~~~~l~-~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
..|+||++-|+-+-...+ ..+.+.|. .|+.++++|.||.|.|...+- ..+.+.+...+.+.+......+..+|.++|
T Consensus 189 p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l-~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G 267 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL-TQDSSRLHQAVLDYLASRPWVDHTRVGAWG 267 (411)
T ss_dssp -EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEEEEEEEEE
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC-CcCHHHHHHHHHHHHhcCCccChhheEEEE
Confidence 336666666666665554 45556676 499999999999999865331 223344555555555555333456999999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccc
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPST 162 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (277)
.|+||.+|.++|..++ .+++++|.+++............ .... ......+...+..... ..
T Consensus 268 ~SfGGy~AvRlA~le~-~RlkavV~~Ga~vh~~ft~~~~~----~~~P---~my~d~LA~rlG~~~~-~~---------- 328 (411)
T PF06500_consen 268 FSFGGYYAVRLAALED-PRLKAVVALGAPVHHFFTDPEWQ----QRVP---DMYLDVLASRLGMAAV-SD---------- 328 (411)
T ss_dssp ETHHHHHHHHHHHHTT-TT-SEEEEES---SCGGH-HHHH----TTS----HHHHHHHHHHCT-SCE--H----------
T ss_pred eccchHHHHHHHHhcc-cceeeEeeeCchHhhhhccHHHH----hcCC---HHHHHHHHHHhCCccC-CH----------
Confidence 9999999999999887 89999999998754333221111 0000 0011111111111000 00
Q ss_pred cccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhh--cCCCccEEEEEeCCCCCCchhhhhhhc---CCccEEEeCCCC-C
Q 023794 163 LKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKF--LSCPVPKLLLLAGTDRLDRPLTIGQMQ---GKFQMVVVRHTG-H 236 (277)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~---~~~~~~~~~~~g-H 236 (277)
.... .....+.-.....+ .++++|+|.+.|++|+++|.+...-+. .+.+...++... |
T Consensus 329 ---------~~l~-------~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~ 392 (411)
T PF06500_consen 329 ---------ESLR-------GELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLH 392 (411)
T ss_dssp ---------HHHH-------HHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHH
T ss_pred ---------HHHH-------HHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCccc
Confidence 0000 00000000001122 678899999999999999988755433 445777777544 3
Q ss_pred cccccChHHHHHHHHHHHHhc
Q 023794 237 AIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 237 ~~~~e~p~~~~~~i~~fl~~~ 257 (277)
.. -+.-...+.+||++.
T Consensus 393 ~g----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 393 MG----YPQALDEIYKWLEDK 409 (411)
T ss_dssp HH----HHHHHHHHHHHHHHH
T ss_pred cc----hHHHHHHHHHHHHHh
Confidence 22 235566777787653
No 95
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.58 E-value=5.1e-13 Score=101.15 Aligned_cols=107 Identities=17% Similarity=0.261 Sum_probs=91.5
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhh----hcCeEEEEcCCCCCCCCCC-----CCCCCcHHHHHHHHHHHHHHHhcC---
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIK----EKARVVAMDLRGHGKSSSE-----NDIDLSIETMCNDVLAVLKEMYGE--- 73 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~----~~~~vi~~d~~G~G~S~~~-----~~~~~~~~~~~~d~~~~l~~l~~~--- 73 (277)
+..||||+|.++-...|..++..|. .++.|++..+.||-.++.. ....++++++++...++++.+...
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 4679999999999999999988775 3799999999999777665 345799999999999999988653
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhc--ccccceEEEEccCC
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKT--LRSLHGLVVVDVVE 112 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p--~~~v~~lvl~~~~~ 112 (277)
...+++|+|||.|++++++++.+.+ ..+|.+++++-|..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 3468999999999999999999987 46799999998863
No 96
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.58 E-value=6.2e-13 Score=98.68 Aligned_cols=174 Identities=23% Similarity=0.251 Sum_probs=128.1
Q ss_pred CeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCC-CCCCCCCCC----------CCcHHHHHHHHHHHHHHHhcCC
Q 023794 7 PVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGH-GKSSSENDI----------DLSIETMCNDVLAVLKEMYGEQ 74 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~-G~S~~~~~~----------~~~~~~~~~d~~~~l~~l~~~~ 74 (277)
|.||++|++.+-....+.+++.|++ ||.|+++|+-+. |.+...... ..+..+...|+.+.++.|....
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 8999999998888899999999987 999999999763 333322210 1234678889999999986443
Q ss_pred ---CCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCcccc
Q 023794 75 ---PPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRN 151 (277)
Q Consensus 75 ---~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
.+++.++|+||||.+++.++...| .+++.+..-+......
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~--~v~a~v~fyg~~~~~~----------------------------------- 150 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP--EVKAAVAFYGGLIADD----------------------------------- 150 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC--CccEEEEecCCCCCCc-----------------------------------
Confidence 568999999999999999999876 6888887654221100
Q ss_pred chhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc-------C
Q 023794 152 LDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ-------G 224 (277)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-------~ 224 (277)
.....++++|+|+++|+.|..++......+. .
T Consensus 151 -----------------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~ 189 (236)
T COG0412 151 -----------------------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGV 189 (236)
T ss_pred -----------------------------------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCC
Confidence 0001678999999999999988876544332 2
Q ss_pred CccEEEeCCCCCcccccC--------h---HHHHHHHHHHHHhcC
Q 023794 225 KFQMVVVRHTGHAIQEDA--------P---EEFASLILNFIARNR 258 (277)
Q Consensus 225 ~~~~~~~~~~gH~~~~e~--------p---~~~~~~i~~fl~~~~ 258 (277)
.+++.+++++.|.++-+. + +.-.+.+.+|+++..
T Consensus 190 ~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 190 KVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred CeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 568899999999888542 1 445677778887754
No 97
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.56 E-value=5.3e-13 Score=108.32 Aligned_cols=105 Identities=12% Similarity=0.139 Sum_probs=84.0
Q ss_pred CCeEEEEccCCCCcccHH-----HHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcE
Q 023794 6 GPVIFCLHGGGYSGLSFA-----LAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSI 78 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~-----~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~ 78 (277)
+.|||+++.+-.....|+ .+++.|.+ ||+|+.+|+++-+.++ ...+++++++.+.+.++.+... +.+++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~~~v 290 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGSRDL 290 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 578999999887766663 57777755 9999999999865543 3578999998888888887643 56789
Q ss_pred EEEEeChhHHHHHH----HHHHhcccccceEEEEccCCCc
Q 023794 79 VLVGHSMGGSVAVH----VAAKKTLRSLHGLVVVDVVEGT 114 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~----~a~~~p~~~v~~lvl~~~~~~~ 114 (277)
+++|+|+||.++.. +++++++++|++++++.+....
T Consensus 291 nl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 291 NLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred eEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 99999999999986 7788872379999999886543
No 98
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=4.4e-13 Score=99.28 Aligned_cols=102 Identities=29% Similarity=0.413 Sum_probs=88.2
Q ss_pred CeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChh
Q 023794 7 PVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMG 86 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~G 86 (277)
|+|+++|+.++...+|..+...|.....|+.++.||+|.-... .-+++++++...+.|......+ +++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~QP~G--Py~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQPEG--PYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhCCCC--CEEEEeeccc
Confidence 6899999999999999999999998999999999999863322 4589999999999999886554 6999999999
Q ss_pred HHHHHHHHHHh--cccccceEEEEccCCC
Q 023794 87 GSVAVHVAAKK--TLRSLHGLVVVDVVEG 113 (277)
Q Consensus 87 g~ia~~~a~~~--p~~~v~~lvl~~~~~~ 113 (277)
|.+|+.+|.+- -.+.|..++++++...
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999873 1157999999999776
No 99
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.55 E-value=3.7e-13 Score=95.98 Aligned_cols=207 Identities=16% Similarity=0.155 Sum_probs=108.6
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCC-CCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGH-GKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~-G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
.+++||+.+|++...+.|..++.+|+. ||+|+.||...| |.|++.-. .+++....+++..+++++...+..++-|++
T Consensus 29 ~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~-eftms~g~~sL~~V~dwl~~~g~~~~GLIA 107 (294)
T PF02273_consen 29 RNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN-EFTMSIGKASLLTVIDWLATRGIRRIGLIA 107 (294)
T ss_dssp -S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHHHTT---EEEEE
T ss_pred cCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChh-hcchHHhHHHHHHHHHHHHhcCCCcchhhh
Confidence 458999999999999999999999987 999999999887 99988764 899999999999999999988888999999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccc
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPST 162 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (277)
-|+.|-+|+..|.+ + .+.-+|...+... ++..+ ........+. ......+..
T Consensus 108 aSLSaRIAy~Va~~-i--~lsfLitaVGVVn--------lr~TL--------------e~al~~Dyl~---~~i~~lp~d 159 (294)
T PF02273_consen 108 ASLSARIAYEVAAD-I--NLSFLITAVGVVN--------LRDTL--------------EKALGYDYLQ---LPIEQLPED 159 (294)
T ss_dssp ETTHHHHHHHHTTT-S----SEEEEES--S---------HHHHH--------------HHHHSS-GGG---S-GGG--SE
T ss_pred hhhhHHHHHHHhhc-c--CcceEEEEeeeee--------HHHHH--------------HHHhccchhh---cchhhCCCc
Confidence 99999999999984 3 3666666543221 11111 1111111111 001111121
Q ss_pred cccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcC-----CccEEEeCCCCCc
Q 023794 163 LKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQG-----KFQMVVVRHTGHA 237 (277)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~-----~~~~~~~~~~gH~ 237 (277)
.....-.... ..........-..-..........+++|++.+++++|.++......++.. ..++..++|++|.
T Consensus 160 ldfeGh~l~~--~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~Hd 237 (294)
T PF02273_consen 160 LDFEGHNLGA--EVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHD 237 (294)
T ss_dssp EEETTEEEEH--HHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-
T ss_pred ccccccccch--HHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccch
Confidence 1111111000 01111111100011223445568889999999999999998888777663 4589999999997
Q ss_pred ccccCh
Q 023794 238 IQEDAP 243 (277)
Q Consensus 238 ~~~e~p 243 (277)
+. |++
T Consensus 238 L~-enl 242 (294)
T PF02273_consen 238 LG-ENL 242 (294)
T ss_dssp TT-SSH
T ss_pred hh-hCh
Confidence 64 344
No 100
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.55 E-value=6.2e-14 Score=118.34 Aligned_cols=91 Identities=23% Similarity=0.271 Sum_probs=76.3
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCC---------CCC-------------CCcHHHHHHH
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSE---------NDI-------------DLSIETMCND 62 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~---------~~~-------------~~~~~~~~~d 62 (277)
.|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|... ... ...+++.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 46899999999999999999999975 899999999999999443 111 1378999999
Q ss_pred HHHHHHHHh------c-------CCCCcEEEEEeChhHHHHHHHHHH
Q 023794 63 VLAVLKEMY------G-------EQPPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 63 ~~~~l~~l~------~-------~~~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
+..+...+. . .+..+++++||||||+++..++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 999999886 1 123589999999999999999976
No 101
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.54 E-value=1.5e-12 Score=102.69 Aligned_cols=103 Identities=7% Similarity=0.040 Sum_probs=80.4
Q ss_pred CeEEEEccCCCCcccH-HHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 7 PVIFCLHGGGYSGLSF-ALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~-~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
|+||++.-+.+..... +.+++.|-.|+.|+..|+..-+...... ..++++++++-+.++++++ +.+ ++++|+|+
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~-~~f~ldDYi~~l~~~i~~~---G~~-v~l~GvCq 177 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSA-GKFDLEDYIDYLIEFIRFL---GPD-IHVIAVCQ 177 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhc-CCCCHHHHHHHHHHHHHHh---CCC-CcEEEEch
Confidence 7899998877555544 4667777669999999998666443222 3689999999899999888 555 89999999
Q ss_pred hHHHHHHHHHHh-----cccccceEEEEccCCCcc
Q 023794 86 GGSVAVHVAAKK-----TLRSLHGLVVVDVVEGTA 115 (277)
Q Consensus 86 Gg~ia~~~a~~~-----p~~~v~~lvl~~~~~~~~ 115 (277)
||..++.+++.. | .++++++++.++....
T Consensus 178 gG~~~laa~Al~a~~~~p-~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 178 PAVPVLAAVALMAENEPP-AQPRSMTLMGGPIDAR 211 (406)
T ss_pred hhHHHHHHHHHHHhcCCC-CCcceEEEEecCccCC
Confidence 999988777665 5 5799999999875543
No 102
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.52 E-value=8.5e-13 Score=122.00 Aligned_cols=102 Identities=22% Similarity=0.362 Sum_probs=88.1
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
++++++|+||++++...|..+.+.|..+++|+++|.+|+|.+.. ..++++++++++.+.++.+.. ..+++++|||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~--~~p~~l~G~S 1141 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQP--HGPYHLLGYS 1141 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCC--CCCEEEEEec
Confidence 46889999999999999999999998899999999999986632 357999999999999988732 2479999999
Q ss_pred hhHHHHHHHHHH---hcccccceEEEEccCC
Q 023794 85 MGGSVAVHVAAK---KTLRSLHGLVVVDVVE 112 (277)
Q Consensus 85 ~Gg~ia~~~a~~---~p~~~v~~lvl~~~~~ 112 (277)
|||.+|.++|.+ .+ +++..++++++..
T Consensus 1142 ~Gg~vA~e~A~~l~~~~-~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARG-EEVAFLGLLDTWP 1171 (1296)
T ss_pred hhhHHHHHHHHHHHHcC-CceeEEEEecCCC
Confidence 999999999986 46 7899999998743
No 103
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.46 E-value=2.9e-13 Score=113.46 Aligned_cols=106 Identities=19% Similarity=0.145 Sum_probs=82.9
Q ss_pred CCCeEEEEccCCCCcc---cHH-HHHHhh-hhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC--CCCc
Q 023794 5 EGPVIFCLHGGGYSGL---SFA-LAAGKI-KEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE--QPPS 77 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~---~~~-~~~~~l-~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~ 77 (277)
..|+||++||++.+.. .+. .....| .+||.|+++|+||+|.|+.... .++ ...++|+.++++.+... ...+
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~-~~~-~~~~~D~~~~i~~l~~q~~~~~~ 98 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD-LLG-SDEAADGYDLVDWIAKQPWCDGN 98 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE-ecC-cccchHHHHHHHHHHhCCCCCCc
Confidence 5689999999987653 222 233444 4599999999999999987543 233 66788999999988653 2258
Q ss_pred EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
+.++|+|+||.+++.+|..+| ..+++++..++...
T Consensus 99 v~~~G~S~GG~~a~~~a~~~~-~~l~aiv~~~~~~d 133 (550)
T TIGR00976 99 VGMLGVSYLAVTQLLAAVLQP-PALRAIAPQEGVWD 133 (550)
T ss_pred EEEEEeChHHHHHHHHhccCC-CceeEEeecCcccc
Confidence 999999999999999999998 89999999887643
No 104
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.46 E-value=1.7e-13 Score=82.94 Aligned_cols=64 Identities=27% Similarity=0.334 Sum_probs=57.7
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLK 68 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~ 68 (277)
.+.+|+++||++.+...|..++..|.+ ||.|+++|+||||.|+.......+++++++|+..+++
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 367899999999999999999999987 9999999999999999877666799999999998864
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.42 E-value=2.3e-11 Score=81.10 Aligned_cols=180 Identities=18% Similarity=0.245 Sum_probs=119.2
Q ss_pred CCCCCeEEEEccCCCCccc--HHHHHHhhhh-cCeEEEEcCCCC-----CCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 023794 3 GTEGPVIFCLHGGGYSGLS--FALAAGKIKE-KARVVAMDLRGH-----GKSSSENDIDLSIETMCNDVLAVLKEMYGEQ 74 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~--~~~~~~~l~~-~~~vi~~d~~G~-----G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 74 (277)
|+..-+||+.||.+.+.++ ...++..|+. |+.|..|+++.. |.-.+++....--.++...+.++-..+ .
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l---~ 87 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL---A 87 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc---c
Confidence 4444579999998876555 5677788876 999999998754 322233332333445555555555544 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchh
Q 023794 75 PPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDS 154 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
..+.++-|+||||-++-.++.+-- ..|+++++++-+....-
T Consensus 88 ~gpLi~GGkSmGGR~aSmvade~~-A~i~~L~clgYPfhppG-------------------------------------- 128 (213)
T COG3571 88 EGPLIIGGKSMGGRVASMVADELQ-APIDGLVCLGYPFHPPG-------------------------------------- 128 (213)
T ss_pred CCceeeccccccchHHHHHHHhhc-CCcceEEEecCccCCCC--------------------------------------
Confidence 347899999999999999988765 56999999874321110
Q ss_pred hhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhh--hcCCccEEEeC
Q 023794 155 ARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQ--MQGKFQMVVVR 232 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~--~~~~~~~~~~~ 232 (277)
.+++.+ .+-+..+.+|+|+.+|+.|.+-..+.... +.+..+++.++
T Consensus 129 ----KPe~~R----------------------------t~HL~gl~tPtli~qGtrD~fGtr~~Va~y~ls~~iev~wl~ 176 (213)
T COG3571 129 ----KPEQLR----------------------------TEHLTGLKTPTLITQGTRDEFGTRDEVAGYALSDPIEVVWLE 176 (213)
T ss_pred ----Ccccch----------------------------hhhccCCCCCeEEeecccccccCHHHHHhhhcCCceEEEEec
Confidence 000000 11236788999999999999876665544 33778999999
Q ss_pred CCCCcccccC----------hHHHHHHHHHHHHh
Q 023794 233 HTGHAIQEDA----------PEEFASLILNFIAR 256 (277)
Q Consensus 233 ~~gH~~~~e~----------p~~~~~~i~~fl~~ 256 (277)
++.|.+--.+ -...++.|..|+..
T Consensus 177 ~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 177 DADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred cCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 9999764322 23456667777654
No 106
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.42 E-value=2.3e-11 Score=89.78 Aligned_cols=98 Identities=27% Similarity=0.414 Sum_probs=66.3
Q ss_pred EEEEccCCC---CcccHHHHHHhhh--hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC------CCCc
Q 023794 9 IFCLHGGGY---SGLSFALAAGKIK--EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE------QPPS 77 (277)
Q Consensus 9 vv~~HG~~~---~~~~~~~~~~~l~--~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~------~~~~ 77 (277)
||++||++. +......++..+. .++.|+.+|+|=. + ..++.+..+|+.+.++.+... +.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~------p--~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA------P--EAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T------T--TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc------c--cccccccccccccceeeeccccccccccccc
Confidence 799999753 3333444555554 3999999999932 1 345667777777777766432 3569
Q ss_pred EEEEEeChhHHHHHHHHHHhccc---ccceEEEEccCCCc
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLR---SLHGLVVVDVVEGT 114 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~---~v~~lvl~~~~~~~ 114 (277)
++|+|+|-||.+|+.++....+. .++++++++|....
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999999875411 48999999986533
No 107
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.41 E-value=3.5e-12 Score=90.28 Aligned_cols=233 Identities=15% Similarity=0.156 Sum_probs=126.3
Q ss_pred eEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCC--CCCcHHHHHH-HHHHHHHHHhcC-CCCcEEEEE
Q 023794 8 VIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSEND--IDLSIETMCN-DVLAVLKEMYGE-QPPSIVLVG 82 (277)
Q Consensus 8 ~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~--~~~~~~~~~~-d~~~~l~~l~~~-~~~~~~lvG 82 (277)
.|++-.+.+.....++.++..+.+ ||.|+.+|+||.|.|+.... ..+.+.+++. |+...++.++.. .-.+...||
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vg 111 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVG 111 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEee
Confidence 344444556666677889888876 99999999999999987643 2467777765 777777777542 224789999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccc
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPST 162 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (277)
||+||.+.-.+.. ++ +..+.....+.......... ...+.. ...+......+... ...+..........
T Consensus 112 HS~GGqa~gL~~~-~~--k~~a~~vfG~gagwsg~m~~--~~~l~~-~~l~~lv~p~lt~w-----~g~~p~~l~G~G~d 180 (281)
T COG4757 112 HSFGGQALGLLGQ-HP--KYAAFAVFGSGAGWSGWMGL--RERLGA-VLLWNLVGPPLTFW-----KGYMPKDLLGLGSD 180 (281)
T ss_pred ccccceeeccccc-Cc--ccceeeEeccccccccchhh--hhcccc-eeeccccccchhhc-----cccCcHhhcCCCcc
Confidence 9999997665554 33 45555555544332111000 000000 00000000000000 00111111111110
Q ss_pred cccCCCcchhHHHHHhHHHHHHHHH-HHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc---CCc--cEEEeCCC--
Q 023794 163 LKYDDSKKCYVYRARLEETEQYWRA-WYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ---GKF--QMVVVRHT-- 234 (277)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~---~~~--~~~~~~~~-- 234 (277)
+. ......++...+....++.. ....+.+....+.+|++.+...+|+.+|+.....+. +|+ +...++.+
T Consensus 181 ~p---~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~ 257 (281)
T COG4757 181 LP---GTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEG 257 (281)
T ss_pred Cc---chHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccC
Confidence 00 00111122221111111110 112244556788999999999999999987766554 554 44445444
Q ss_pred --CCcccccCh-HHHHHHHHHHH
Q 023794 235 --GHAIQEDAP-EEFASLILNFI 254 (277)
Q Consensus 235 --gH~~~~e~p-~~~~~~i~~fl 254 (277)
||+-...+| |.+.+.+.+|+
T Consensus 258 ~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 258 PLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cccchhhhccchHHHHHHHHHhh
Confidence 999999888 77777777665
No 108
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.40 E-value=4.5e-12 Score=91.95 Aligned_cols=211 Identities=17% Similarity=0.109 Sum_probs=129.7
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCC----CCC----------------CCCcHHHHHHHH
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSS----END----------------IDLSIETMCNDV 63 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~----~~~----------------~~~~~~~~~~d~ 63 (277)
+.-|.||-.||.+++...|..+...-..||.|+.+|.||.|.|+. ++. ..|-+.....|+
T Consensus 81 ~~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~ 160 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDA 160 (321)
T ss_pred CccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHH
Confidence 356899999999999999988888777899999999999998843 111 012233444555
Q ss_pred HHHHHHHh---cCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHH
Q 023794 64 LAVLKEMY---GEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAI 140 (277)
Q Consensus 64 ~~~l~~l~---~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (277)
...++.+. ..+.+++.+.|.|.||.+++..+...| +|++++.+-|.......... . .......++.
T Consensus 161 ~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~--rik~~~~~~Pfl~df~r~i~-------~--~~~~~ydei~ 229 (321)
T COG3458 161 VRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP--RIKAVVADYPFLSDFPRAIE-------L--ATEGPYDEIQ 229 (321)
T ss_pred HHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh--hhhcccccccccccchhhee-------e--cccCcHHHHH
Confidence 55555443 235579999999999999999999886 79998887765432211100 0 0000001111
Q ss_pred HHhhcCCccccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhh
Q 023794 141 EWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIG 220 (277)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 220 (277)
..+..... . .......+ + +-|.......+++|+|+..|-.|+++++...-
T Consensus 230 ~y~k~h~~--------------------~-e~~v~~TL----~-----yfD~~n~A~RiK~pvL~svgL~D~vcpPstqF 279 (321)
T COG3458 230 TYFKRHDP--------------------K-EAEVFETL----S-----YFDIVNLAARIKVPVLMSVGLMDPVCPPSTQF 279 (321)
T ss_pred HHHHhcCc--------------------h-HHHHHHHH----h-----hhhhhhHHHhhccceEEeecccCCCCCChhhH
Confidence 11110000 0 00000000 0 11333334788999999999999999987654
Q ss_pred hhc----CCccEEEeCCCCCcccccChHHHHHHHHHHHHhcC
Q 023794 221 QMQ----GKFQMVVVRHTGHAIQEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 221 ~~~----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 258 (277)
..+ ...++.+++.-+|. +-|.-..+.+..|++...
T Consensus 280 A~yN~l~~~K~i~iy~~~aHe---~~p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 280 AAYNALTTSKTIEIYPYFAHE---GGPGFQSRQQVHFLKILF 318 (321)
T ss_pred HHhhcccCCceEEEeeccccc---cCcchhHHHHHHHHHhhc
Confidence 443 23366777766664 445556666777776643
No 109
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.38 E-value=3.6e-11 Score=88.66 Aligned_cols=107 Identities=24% Similarity=0.273 Sum_probs=74.4
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhc----CCCCcEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYG----EQPPSIV 79 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~----~~~~~~~ 79 (277)
.=|+|||+||+......|..+..+++. ||-|+.+|+...+...... ......+.++.+.+-++.... .+..++.
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~-~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~ 94 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD-EVASAAEVIDWLAKGLESKLPLGVKPDFSKLA 94 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch-hHHHHHHHHHHHHhcchhhccccccccccceE
Confidence 569999999999777778899999988 9999999976543311111 111222333332222222111 1446899
Q ss_pred EEEeChhHHHHHHHHHHh-----cccccceEEEEccCCC
Q 023794 80 LVGHSMGGSVAVHVAAKK-----TLRSLHGLVVVDVVEG 113 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~-----p~~~v~~lvl~~~~~~ 113 (277)
|.|||-||-+|..++..+ + .+++++++++|..+
T Consensus 95 l~GHSrGGk~Af~~al~~~~~~~~-~~~~ali~lDPVdG 132 (259)
T PF12740_consen 95 LAGHSRGGKVAFAMALGNASSSLD-LRFSALILLDPVDG 132 (259)
T ss_pred EeeeCCCCHHHHHHHhhhcccccc-cceeEEEEeccccc
Confidence 999999999999999887 4 58999999999764
No 110
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.37 E-value=1e-10 Score=95.40 Aligned_cols=109 Identities=28% Similarity=0.414 Sum_probs=78.4
Q ss_pred CCCeEEEEccCCCCcccHHHHHH------------------hhhhcCeEEEEcCC-CCCCCCCCCC-CCCcHHHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAG------------------KIKEKARVVAMDLR-GHGKSSSEND-IDLSIETMCNDVL 64 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~------------------~l~~~~~vi~~d~~-G~G~S~~~~~-~~~~~~~~~~d~~ 64 (277)
+.|+||+++|+++.+..+..+.+ .+.+...++.+|.| |+|.|..... ...+.++.++|+.
T Consensus 76 ~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~ 155 (462)
T PTZ00472 76 EAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMY 155 (462)
T ss_pred CCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHH
Confidence 57999999999888876643321 12234789999976 8888865432 2456788999999
Q ss_pred HHHHHHhcC----CCCcEEEEEeChhHHHHHHHHHHhc---------ccccceEEEEccCCC
Q 023794 65 AVLKEMYGE----QPPSIVLVGHSMGGSVAVHVAAKKT---------LRSLHGLVVVDVVEG 113 (277)
Q Consensus 65 ~~l~~l~~~----~~~~~~lvG~S~Gg~ia~~~a~~~p---------~~~v~~lvl~~~~~~ 113 (277)
++++.+... ...+++|+|||+||.++..+|..-- .-.++++++-++...
T Consensus 156 ~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 156 NFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 999876422 3368999999999999988887621 024788888887643
No 111
>PRK10115 protease 2; Provisional
Probab=99.37 E-value=2.6e-11 Score=103.69 Aligned_cols=108 Identities=16% Similarity=0.191 Sum_probs=74.9
Q ss_pred CCCCeEEEEccCCCCcc--cHHHHHHhh-hhcCeEEEEcCCCCCCCCC---CC----CCCCcHHHHHHHHHHHHHHHhcC
Q 023794 4 TEGPVIFCLHGGGYSGL--SFALAAGKI-KEKARVVAMDLRGHGKSSS---EN----DIDLSIETMCNDVLAVLKEMYGE 73 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~--~~~~~~~~l-~~~~~vi~~d~~G~G~S~~---~~----~~~~~~~~~~~d~~~~l~~l~~~ 73 (277)
+..|.||++||..+... .|......| .+||.|+.++.||-|.=.. .. ....+++++++.+..+++. +..
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~ 521 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYG 521 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCC
Confidence 35699999999776553 355444444 4599999999998643321 11 1123555555444444432 222
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
+.+++.+.|.|.||.++..++..+| ++++++|...+...
T Consensus 522 d~~rl~i~G~S~GG~l~~~~~~~~P-dlf~A~v~~vp~~D 560 (686)
T PRK10115 522 SPSLCYGMGGSAGGMLMGVAINQRP-ELFHGVIAQVPFVD 560 (686)
T ss_pred ChHHeEEEEECHHHHHHHHHHhcCh-hheeEEEecCCchh
Confidence 4679999999999999999999999 99999999877543
No 112
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.37 E-value=5e-11 Score=81.17 Aligned_cols=169 Identities=16% Similarity=0.163 Sum_probs=110.1
Q ss_pred CeEEEEccCCCCc-ccHHHHH-HhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 7 PVIFCLHGGGYSG-LSFALAA-GKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 7 p~vv~~HG~~~~~-~~~~~~~-~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
+.+|.+||+.+|. ..|+... ..+.. +-.+++. +-..-..+++++.+...+... .++++||+||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~---a~rveq~--------~w~~P~~~dWi~~l~~~v~a~----~~~~vlVAHS 67 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN---ARRVEQD--------DWEAPVLDDWIARLEKEVNAA----EGPVVLVAHS 67 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc---chhcccC--------CCCCCCHHHHHHHHHHHHhcc----CCCeEEEEec
Confidence 5689999986654 4465433 23322 2223332 111336777777777766665 3469999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccccc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLK 164 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (277)
+||.++++++.+.- .+|.|++|++++......... .... .+
T Consensus 68 LGc~~v~h~~~~~~-~~V~GalLVAppd~~~~~~~~--------------------~~~~------tf------------ 108 (181)
T COG3545 68 LGCATVAHWAEHIQ-RQVAGALLVAPPDVSRPEIRP--------------------KHLM------TF------------ 108 (181)
T ss_pred ccHHHHHHHHHhhh-hccceEEEecCCCccccccch--------------------hhcc------cc------------
Confidence 99999999999876 789999999986432210000 0000 00
Q ss_pred cCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcC--CccEEEeCCCCCccccc-
Q 023794 165 YDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQG--KFQMVVVRHTGHAIQED- 241 (277)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e- 241 (277)
. .........|.+++...+|++++.+....+.. ...++.+.++||+.-.+
T Consensus 109 -~--------------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~lv~~g~~GHiN~~sG 161 (181)
T COG3545 109 -D--------------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWGSALVDVGEGGHINAESG 161 (181)
T ss_pred -C--------------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhccHhheecccccccchhhc
Confidence 0 00014567899999999999999998887764 45788888899976433
Q ss_pred --ChHHHHHHHHHHHHh
Q 023794 242 --APEEFASLILNFIAR 256 (277)
Q Consensus 242 --~p~~~~~~i~~fl~~ 256 (277)
.-.+....+.+|+.+
T Consensus 162 ~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 162 FGPWPEGYALLAQLLSR 178 (181)
T ss_pred CCCcHHHHHHHHHHhhh
Confidence 336677777777765
No 113
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.37 E-value=3.4e-10 Score=87.50 Aligned_cols=220 Identities=20% Similarity=0.296 Sum_probs=125.1
Q ss_pred CCCeEEEEccCCC-----CcccHHHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-Hh--cCC
Q 023794 5 EGPVIFCLHGGGY-----SGLSFALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKE-MY--GEQ 74 (277)
Q Consensus 5 ~~p~vv~~HG~~~-----~~~~~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~-l~--~~~ 74 (277)
..|.||++||+|. ....++.+...+.. +.-|+++|+|=--+. ..+..+++-.+.+.-+.+. +. +.+
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh----~~Pa~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH----PFPAAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC----CCCccchHHHHHHHHHHHhHHHHhCCC
Confidence 5689999999763 35567888888755 788999999832211 1244666666666666664 21 336
Q ss_pred CCcEEEEEeChhHHHHHHHHHHhc-----ccccceEEEEccCCCcchHHhHHHHHHHHhhcc-chhhHHHHHHHhhcCCc
Q 023794 75 PPSIVLVGHSMGGSVAVHVAAKKT-----LRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQ-HFSSIEKAIEWSVKGGS 148 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~~~p-----~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 148 (277)
.++++|+|-|.||.+|..+|.+.- +-++++.|++.|............+........ ........+........
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~ 244 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGK 244 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCC
Confidence 789999999999999999987632 157999999999765443322222211111100 01111111111111111
Q ss_pred cccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCc-cEEEEEeCCCCCCchh-hh-hhh---
Q 023794 149 LRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPV-PKLLLLAGTDRLDRPL-TI-GQM--- 222 (277)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~-~~-~~~--- 222 (277)
. ..+.. +...... ..........+ |++++.++.|.+.+.. .+ .++
T Consensus 245 ~--------------~~~~p-----~~np~~~----------~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~ 295 (336)
T KOG1515|consen 245 T--------------DLDHP-----FINPVGN----------SLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKA 295 (336)
T ss_pred C--------------CcCCc-----ccccccc----------ccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHc
Confidence 0 00000 0000000 00011123344 4999999999864322 22 222
Q ss_pred cCCccEEEeCCCCCcccccCh-----HHHHHHHHHHHHhc
Q 023794 223 QGKFQMVVVRHTGHAIQEDAP-----EEFASLILNFIARN 257 (277)
Q Consensus 223 ~~~~~~~~~~~~gH~~~~e~p-----~~~~~~i~~fl~~~ 257 (277)
--.+++.+++++.|.++.-.| .++.+.+.+|+++.
T Consensus 296 Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 296 GVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 234467789999998876555 46778888888764
No 114
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.36 E-value=1.7e-11 Score=90.36 Aligned_cols=107 Identities=19% Similarity=0.268 Sum_probs=71.9
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhh---------hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHh----
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIK---------EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMY---- 71 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~---------~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~---- 71 (277)
++.+||||||.+++...|+.+...+. ..++++++|+......-. ...+.+.++-+.+.++.+.
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~----g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH----GRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc----cccHHHHHHHHHHHHHHHHHhhh
Confidence 57899999999999888887765552 157899999876432211 2233444443333333331
Q ss_pred --cCCCCcEEEEEeChhHHHHHHHHHHhc--ccccceEEEEccCCCcc
Q 023794 72 --GEQPPSIVLVGHSMGGSVAVHVAAKKT--LRSLHGLVVVDVVEGTA 115 (277)
Q Consensus 72 --~~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~~v~~lvl~~~~~~~~ 115 (277)
....++++||||||||.+|..++...+ .+.|+.+|.++++....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 224579999999999999988886532 14799999999875433
No 115
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.35 E-value=3.4e-10 Score=86.47 Aligned_cols=236 Identities=17% Similarity=0.144 Sum_probs=127.0
Q ss_pred CCCCeEEEEccCCCCcccHH-HH-H-HhhhhcCeEEEEcCCCCCCCCCCCCCC---CcH-------HHHHHHHHHHHHHH
Q 023794 4 TEGPVIFCLHGGGYSGLSFA-LA-A-GKIKEKARVVAMDLRGHGKSSSENDID---LSI-------ETMCNDVLAVLKEM 70 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~-~~-~-~~l~~~~~vi~~d~~G~G~S~~~~~~~---~~~-------~~~~~d~~~~l~~l 70 (277)
+.+|.+|.+.|.|......+ .+ + +.+.+|+..+.+..|-||.-.+..... .+. ...+.+...+++.+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 35788888888777444333 23 3 444569999999999999876543211 122 23355667778888
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccc
Q 023794 71 YGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLR 150 (277)
Q Consensus 71 ~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (277)
...+..++.+.|.||||.+|...|...| ..+..+-++++......-... .+ .....|..+... +....+.
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p-~pv~~vp~ls~~sAs~vFt~G----vl-s~~i~W~~L~~q----~~~~~~~ 239 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWP-RPVALVPCLSWSSASVVFTEG----VL-SNSINWDALEKQ----FEDTVYE 239 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCC-CceeEEEeecccCCCcchhhh----hh-hcCCCHHHHHHH----hcccchh
Confidence 7778889999999999999999999999 777777776664332110000 00 011111111111 0000000
Q ss_pred cchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCC-----ccEEEEEeCCCCCCchh---hhhhh
Q 023794 151 NLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCP-----VPKLLLLAGTDRLDRPL---TIGQM 222 (277)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~P~l~i~g~~D~~~~~~---~~~~~ 222 (277)
............................. ..... .+....+.+.+ -.++++.+++|..+|.. .+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~----~m~~~-md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~ 314 (348)
T PF09752_consen 240 EEISDIPAQNKSLPLDSMEERRRDREALR----FMRGV-MDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEI 314 (348)
T ss_pred hhhcccccCcccccchhhccccchHHHHH----HHHHH-HHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHh
Confidence 00000000000000000000000000000 00000 01111122222 34688999999887765 45566
Q ss_pred cCCccEEEeCCCCCcc-cccChHHHHHHHHHHHH
Q 023794 223 QGKFQMVVVRHTGHAI-QEDAPEEFASLILNFIA 255 (277)
Q Consensus 223 ~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~ 255 (277)
.|++++..+++ ||.. ++-+.+.|.+.|.+-++
T Consensus 315 WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 315 WPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 69999999986 9966 45566888888877654
No 116
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.31 E-value=3.1e-11 Score=88.69 Aligned_cols=161 Identities=19% Similarity=0.211 Sum_probs=81.3
Q ss_pred CCCeEEEEccCCCCcccHHHH----HHhhhh-cCeEEEEcCCC-----CCCCCC-----------CC-------C----C
Q 023794 5 EGPVIFCLHGGGYSGLSFALA----AGKIKE-KARVVAMDLRG-----HGKSSS-----------EN-------D----I 52 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~----~~~l~~-~~~vi~~d~~G-----~G~S~~-----------~~-------~----~ 52 (277)
.++.|||+||++++...|+.. ...|.+ ++..+.+|-|- -|-... .+ . .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 578999999999999998754 455566 78888877542 111100 00 0 0
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcc-------cccceEEEEccCCCcchHHhHHHHHH
Q 023794 53 DLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTL-------RSLHGLVVVDVVEGTAMASLIHMQKI 125 (277)
Q Consensus 53 ~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~-------~~v~~lvl~~~~~~~~~~~~~~~~~~ 125 (277)
...+++..+.+.+.++.. ++ =..|+|+|.||.+|..++..... ..++-+|++++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~~---GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEEN---GP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred ccCHHHHHHHHHHHHHhc---CC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 123455555666666665 32 24699999999999988865310 246778888764332111
Q ss_pred HHhhccchhhHHHHHHHhhcCCccccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEE
Q 023794 126 LSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLL 205 (277)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 205 (277)
+. ... ....|++|+|.
T Consensus 151 ---------------------------------------~~------------------------~~~-~~~~i~iPtlH 166 (212)
T PF03959_consen 151 ---------------------------------------YQ------------------------ELY-DEPKISIPTLH 166 (212)
T ss_dssp ---------------------------------------GT------------------------TTT---TT---EEEE
T ss_pred ---------------------------------------hh------------------------hhh-ccccCCCCeEE
Confidence 00 000 11677999999
Q ss_pred EEeCCCCCCchhhhhh---hcCC-ccEEEeCCCCCcccccC
Q 023794 206 LLAGTDRLDRPLTIGQ---MQGK-FQMVVVRHTGHAIQEDA 242 (277)
Q Consensus 206 i~g~~D~~~~~~~~~~---~~~~-~~~~~~~~~gH~~~~e~ 242 (277)
|+|++|.+++++.... .+.+ .+++..+ +||.++...
T Consensus 167 v~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~ 206 (212)
T PF03959_consen 167 VIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKK 206 (212)
T ss_dssp EEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----H
T ss_pred EEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCCh
Confidence 9999999998655444 4445 6777776 599887654
No 117
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.28 E-value=1.5e-10 Score=83.86 Aligned_cols=109 Identities=28% Similarity=0.253 Sum_probs=76.6
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC----CCCcEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE----QPPSIV 79 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~----~~~~~~ 79 (277)
.=|.|+|+||+......|..+..+++. ||-|+++++-..-.-+.. +...+....++.+..-+.++... +..++.
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~-~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kla 123 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQ-DEIKSAASVINWLPEGLQHVLPENVEANLSKLA 123 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCch-HHHHHHHHHHHHHHhhhhhhCCCCcccccceEE
Confidence 669999999999998999999999987 999999999743111000 00122333333444444443322 346899
Q ss_pred EEEeChhHHHHHHHHHHh-cccccceEEEEccCCCc
Q 023794 80 LVGHSMGGSVAVHVAAKK-TLRSLHGLVVVDVVEGT 114 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~-p~~~v~~lvl~~~~~~~ 114 (277)
++|||.||-.|..+|..+ ..-.++++|.++|..+.
T Consensus 124 l~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 124 LSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred EeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 999999999999999887 32468999999987653
No 118
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.27 E-value=4.3e-10 Score=81.92 Aligned_cols=107 Identities=21% Similarity=0.198 Sum_probs=68.8
Q ss_pred CCCeEEEEccCCCCcccHHHH--HHhhhh--cCeEEEEcCCCCCCCCC----CCCCCCcHHHHHHHHHHHHHHHh---cC
Q 023794 5 EGPVIFCLHGGGYSGLSFALA--AGKIKE--KARVVAMDLRGHGKSSS----ENDIDLSIETMCNDVLAVLKEMY---GE 73 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~--~~~l~~--~~~vi~~d~~G~G~S~~----~~~~~~~~~~~~~d~~~~l~~l~---~~ 73 (277)
..|.||++||.+++...+... ...+++ +|-|+.++......... .......-...+..|.++++++. ..
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 458999999999998876542 234554 78888888542111100 00000000011223333343332 33
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
+.++|++.|+|.||+.+..++..+| +.+.++.+++..+
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~p-d~faa~a~~sG~~ 132 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYP-DLFAAVAVVSGVP 132 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCC-ccceEEEeecccc
Confidence 6789999999999999999999999 9999998887754
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.27 E-value=1.4e-10 Score=86.38 Aligned_cols=109 Identities=24% Similarity=0.243 Sum_probs=73.7
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhh-h-c--CeE--EEEcCCCC----CCCCC---CC-------CCC-CcHHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIK-E-K--ARV--VAMDLRGH----GKSSS---EN-------DID-LSIETMCNDV 63 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~-~-~--~~v--i~~d~~G~----G~S~~---~~-------~~~-~~~~~~~~d~ 63 (277)
..-|.||+||++++...+..++..+. + + -.+ +.++.-|. |.=.. .+ ... -++...++.+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34589999999999999999999997 4 3 233 34444443 22111 11 112 3788999999
Q ss_pred HHHHHHHhcC-CCCcEEEEEeChhHHHHHHHHHHhcc----cccceEEEEccCCC
Q 023794 64 LAVLKEMYGE-QPPSIVLVGHSMGGSVAVHVAAKKTL----RSLHGLVVVDVVEG 113 (277)
Q Consensus 64 ~~~l~~l~~~-~~~~~~lvG~S~Gg~ia~~~a~~~p~----~~v~~lvl~~~~~~ 113 (277)
..++..|... +.+++.+|||||||..++.|+..+.. -++..+|.++++..
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 9999999765 56899999999999999999988531 15899999987543
No 120
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.26 E-value=1.4e-10 Score=91.41 Aligned_cols=109 Identities=20% Similarity=0.234 Sum_probs=85.7
Q ss_pred CCCCeEEEEccCCCCcccHHH------HHHhhhh-cCeEEEEcCCCCCCCCCC----C-----CCCCcHHHHHH-HHHHH
Q 023794 4 TEGPVIFCLHGGGYSGLSFAL------AAGKIKE-KARVVAMDLRGHGKSSSE----N-----DIDLSIETMCN-DVLAV 66 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~------~~~~l~~-~~~vi~~d~~G~G~S~~~----~-----~~~~~~~~~~~-d~~~~ 66 (277)
+.+|+|++.||+.+++..|-. +.-.|.+ ||.|+.-+.||.-.|... + -..+++.+++. |+-+.
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 478999999999999998842 3334555 999999999997666431 1 12578888665 88888
Q ss_pred HHHHhcC-CCCcEEEEEeChhHHHHHHHHHHhcc--cccceEEEEccCC
Q 023794 67 LKEMYGE-QPPSIVLVGHSMGGSVAVHVAAKKTL--RSLHGLVVVDVVE 112 (277)
Q Consensus 67 l~~l~~~-~~~~~~lvG~S~Gg~ia~~~a~~~p~--~~v~~lvl~~~~~ 112 (277)
|+++... +.++++.+|||.|+......+...|+ .+|+.+++++|+.
T Consensus 151 IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 151 IDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 8886543 56799999999999999999988762 4799999999976
No 121
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.25 E-value=3e-10 Score=79.28 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=77.0
Q ss_pred eEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEEEEeCh
Q 023794 8 VIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVLVGHSM 85 (277)
Q Consensus 8 ~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~lvG~S~ 85 (277)
.+||+.|=++-...=..++..|++ |+.|+.+|-+-|=.+. -+.++.+.|+.++++..... +.++++|+|+|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 578888866555444577888877 9999999987665543 36788899999999887644 567999999999
Q ss_pred hHHHHHHHHHHhcc---cccceEEEEccCCC
Q 023794 86 GGSVAVHVAAKKTL---RSLHGLVVVDVVEG 113 (277)
Q Consensus 86 Gg~ia~~~a~~~p~---~~v~~lvl~~~~~~ 113 (277)
|+-+.-....+-|. ++|..++|+++...
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 99887777666552 57999999988653
No 122
>PRK04940 hypothetical protein; Provisional
Probab=99.24 E-value=4.8e-09 Score=73.16 Aligned_cols=173 Identities=13% Similarity=0.120 Sum_probs=99.5
Q ss_pred EEEEccCCCCccc--HHHH-HHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-CCcEEEEEeC
Q 023794 9 IFCLHGGGYSGLS--FALA-AGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQ-PPSIVLVGHS 84 (277)
Q Consensus 9 vv~~HG~~~~~~~--~~~~-~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~~lvG~S 84 (277)
||++||+.++... .+.. ...+..+.+++ +++ ..+..+-.+.+.+.+..+...+ .+++.|||.|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 7999999999888 5321 12332234443 222 1233333444555554332111 2468999999
Q ss_pred hhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccccc
Q 023794 85 MGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLK 164 (277)
Q Consensus 85 ~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (277)
+||+.|..+|.++. + ..||++|+..... .+. . ..... ..
T Consensus 69 LGGyyA~~La~~~g---~-~aVLiNPAv~P~~----~L~--------------~----~ig~~-------------~~-- 107 (180)
T PRK04940 69 LGGYWAERIGFLCG---I-RQVIFNPNLFPEE----NME--------------G----KIDRP-------------EE-- 107 (180)
T ss_pred hHHHHHHHHHHHHC---C-CEEEECCCCChHH----HHH--------------H----HhCCC-------------cc--
Confidence 99999999999985 3 5777888654311 000 0 00000 00
Q ss_pred cCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcCCc-cEEEeCCCCCcccccCh
Q 023794 165 YDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQGKF-QMVVVRHTGHAIQEDAP 243 (277)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p 243 (277)
+. .. .... ..++. .+-+-..+++....|.+.+...+.+.+.++ +..+.+|+.|-+- .=
T Consensus 108 y~---------~~---~~~h----~~eL~---~~~p~r~~vllq~gDEvLDyr~a~~~y~~~y~~~v~~GGdH~f~--~f 166 (180)
T PRK04940 108 YA---------DI---ATKC----VTNFR---EKNRDRCLVILSRNDEVLDSQRTAEELHPYYEIVWDEEQTHKFK--NI 166 (180)
T ss_pred hh---------hh---hHHH----HHHhh---hcCcccEEEEEeCCCcccCHHHHHHHhccCceEEEECCCCCCCC--CH
Confidence 00 00 0000 00111 122233589999999998888888777777 8899998888653 23
Q ss_pred HHHHHHHHHHHHh
Q 023794 244 EEFASLILNFIAR 256 (277)
Q Consensus 244 ~~~~~~i~~fl~~ 256 (277)
++....|.+|++.
T Consensus 167 e~~l~~I~~F~~~ 179 (180)
T PRK04940 167 SPHLQRIKAFKTL 179 (180)
T ss_pred HHHHHHHHHHHhc
Confidence 6688888888853
No 123
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.24 E-value=1.5e-09 Score=85.06 Aligned_cols=103 Identities=25% Similarity=0.351 Sum_probs=68.9
Q ss_pred CCCeEEEEccCC---CCcccHHHHHHhhh--hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHh------cC
Q 023794 5 EGPVIFCLHGGG---YSGLSFALAAGKIK--EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMY------GE 73 (277)
Q Consensus 5 ~~p~vv~~HG~~---~~~~~~~~~~~~l~--~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~------~~ 73 (277)
..|+||++||++ ++......++..+. .|+.|+++|+|-.- ...+....+|+.+.+..+. +.
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP--------e~~~p~~~~d~~~a~~~l~~~~~~~g~ 149 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP--------EHPFPAALEDAYAAYRWLRANAAELGI 149 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC--------CCCCCchHHHHHHHHHHHHhhhHhhCC
Confidence 479999999975 34444434444443 39999999999322 1233334444444444433 22
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhccc---ccceEEEEccCCCcc
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLR---SLHGLVVVDVVEGTA 115 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~---~v~~lvl~~~~~~~~ 115 (277)
+++++.++|+|-||.+++.++..-.++ .....+++.|.....
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 467899999999999999999875412 578899998876544
No 124
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.22 E-value=2e-09 Score=83.62 Aligned_cols=105 Identities=10% Similarity=0.078 Sum_probs=78.3
Q ss_pred CCeEEEEccCCCCcccHH-----HHHHhhh-hcCeEEEEcCCCCCCCCCCCCCCCcHHHHH-HHHHHHHHHHhcC-CCCc
Q 023794 6 GPVIFCLHGGGYSGLSFA-----LAAGKIK-EKARVVAMDLRGHGKSSSENDIDLSIETMC-NDVLAVLKEMYGE-QPPS 77 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~-----~~~~~l~-~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~-~d~~~~l~~l~~~-~~~~ 77 (277)
++|++.+|-+-.....|+ .++..|. +|+.|+.+|+++=..+.. ..++++++ +.+.+.++..... +.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 578999999887777764 3555554 599999999986544433 34677777 6666666655433 5578
Q ss_pred EEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCc
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGT 114 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~ 114 (277)
+.++|+|.||+++..+++.++..+|++++++.+....
T Consensus 183 InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred cceeeEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 9999999999999999999984449999999876543
No 125
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.22 E-value=1.7e-09 Score=93.46 Aligned_cols=84 Identities=15% Similarity=0.128 Sum_probs=66.3
Q ss_pred Hhhh-hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-----------------CCcEEEEEeChhHH
Q 023794 27 GKIK-EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQ-----------------PPSIVLVGHSMGGS 88 (277)
Q Consensus 27 ~~l~-~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~-----------------~~~~~lvG~S~Gg~ 88 (277)
+.+. .||.|+.+|.||.|.|++... .+. .+-.+|..++|+.+.... ..+|.++|.|+||.
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~-~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT-TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc-cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 4454 499999999999999988642 222 456778888888886321 35899999999999
Q ss_pred HHHHHHHHhcccccceEEEEccCCC
Q 023794 89 VAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 89 ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
+++.+|...| ..++++|..++...
T Consensus 351 ~~~~aAa~~p-p~LkAIVp~a~is~ 374 (767)
T PRK05371 351 LPNAVATTGV-EGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHhhCC-CcceEEEeeCCCCc
Confidence 9999999888 88999999876543
No 126
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.22 E-value=1.5e-09 Score=80.00 Aligned_cols=96 Identities=24% Similarity=0.319 Sum_probs=73.7
Q ss_pred EEccCC--CCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHH
Q 023794 11 CLHGGG--YSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGS 88 (277)
Q Consensus 11 ~~HG~~--~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ 88 (277)
++|..+ ++...|..+...+...+.|+++|.+|++.+.... .+++++++.+.+.+.... ...+++++|||+||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~--~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAA--GGRPFVLVGHSSGGL 76 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhc--CCCCeEEEEECHHHH
Confidence 455543 6677899999999888999999999998765433 467777777666555442 235799999999999
Q ss_pred HHHHHHHHh---cccccceEEEEccCC
Q 023794 89 VAVHVAAKK---TLRSLHGLVVVDVVE 112 (277)
Q Consensus 89 ia~~~a~~~---p~~~v~~lvl~~~~~ 112 (277)
++..++... + ..+.+++++++..
T Consensus 77 ~a~~~a~~l~~~~-~~~~~l~~~~~~~ 102 (212)
T smart00824 77 LAHAVAARLEARG-IPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHhCC-CCCcEEEEEccCC
Confidence 999999863 4 5689999888754
No 127
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.21 E-value=2.6e-11 Score=92.75 Aligned_cols=95 Identities=24% Similarity=0.274 Sum_probs=69.8
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCC--CCCCCCCCC-----CCcHHHHHHHHHHHHHHHhcC--
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGH--GKSSSENDI-----DLSIETMCNDVLAVLKEMYGE-- 73 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~--G~S~~~~~~-----~~~~~~~~~d~~~~l~~l~~~-- 73 (277)
..-|.||+-||.++....|..+.+.+++ ||-|..+|++|- |........ ..-+-+...|+..+|+.|...
T Consensus 69 ~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 69 YLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred CcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 4569999999999999999999999988 999999999994 433322110 112234455666666655322
Q ss_pred --------CCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 74 --------QPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 74 --------~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
+..+|.++|||+||..++..+....
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccc
Confidence 3468999999999999999987643
No 128
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.21 E-value=7e-09 Score=74.67 Aligned_cols=109 Identities=20% Similarity=0.283 Sum_probs=85.4
Q ss_pred CCCCCCeEEEEccCCCCcccHHHHHHhhhh----cCeEEEEcCCCCCCCC---C-----CCCCCCcHHHHHHHHHHHHHH
Q 023794 2 AGTEGPVIFCLHGGGYSGLSFALAAGKIKE----KARVVAMDLRGHGKSS---S-----ENDIDLSIETMCNDVLAVLKE 69 (277)
Q Consensus 2 ~g~~~p~vv~~HG~~~~~~~~~~~~~~l~~----~~~vi~~d~~G~G~S~---~-----~~~~~~~~~~~~~d~~~~l~~ 69 (277)
.|.+++.+++++|.++....|.+++..|.. .+.++.+...||-.-. . .....++++++++.-.++++.
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 356789999999999999999999888754 3669999888885543 1 112368999999999999998
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHH-hcccccceEEEEccC
Q 023794 70 MYGEQPPSIVLVGHSMGGSVAVHVAAK-KTLRSLHGLVVVDVV 111 (277)
Q Consensus 70 l~~~~~~~~~lvG~S~Gg~ia~~~a~~-~p~~~v~~lvl~~~~ 111 (277)
....+ .+++++|||-|+++.+.+... .+.-.|..++++-|.
T Consensus 105 ~~Pk~-~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 105 YVPKD-RKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred hCCCC-CEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 76543 589999999999999998874 333468888887664
No 129
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.20 E-value=3.6e-10 Score=86.64 Aligned_cols=106 Identities=24% Similarity=0.204 Sum_probs=75.6
Q ss_pred CCCCeEEEEccCCCCccc-HHHH---HH-------hhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhc
Q 023794 4 TEGPVIFCLHGGGYSGLS-FALA---AG-------KIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYG 72 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~-~~~~---~~-------~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~ 72 (277)
+.-|+||..|+.+.+... .... .. ....||.|+..|.||.|.|+.... .....-++|..+.|+.+..
T Consensus 18 ~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~--~~~~~e~~D~~d~I~W~~~ 95 (272)
T PF02129_consen 18 GPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFD--PMSPNEAQDGYDTIEWIAA 95 (272)
T ss_dssp SSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B---TTSHHHHHHHHHHHHHHHH
T ss_pred CcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccc--cCChhHHHHHHHHHHHHHh
Confidence 355889999998865422 2211 11 344599999999999999987653 2266678899999998876
Q ss_pred CCC--CcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 73 EQP--PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 73 ~~~--~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
... .+|.++|.|++|..++.+|...| ..+++++...+..
T Consensus 96 Qpws~G~VGm~G~SY~G~~q~~~A~~~~-p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 96 QPWSNGKVGMYGISYGGFTQWAAAARRP-PHLKAIVPQSGWS 136 (272)
T ss_dssp CTTEEEEEEEEEETHHHHHHHHHHTTT--TTEEEEEEESE-S
T ss_pred CCCCCCeEEeeccCHHHHHHHHHHhcCC-CCceEEEecccCC
Confidence 533 48999999999999999999888 7899999987754
No 130
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.16 E-value=4e-10 Score=89.54 Aligned_cols=105 Identities=23% Similarity=0.359 Sum_probs=60.9
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCC------CC-----C-------C-------CC--C--C
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKS------SS-----E-------N-------DI--D--L 54 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S------~~-----~-------~-------~~--~--~ 54 (277)
.-|+|||-||++++...+..++..|+. ||-|+++|+|..-.+ +. . . .. . +
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 458999999999999999999999987 999999999953111 00 0 0 00 0 0
Q ss_pred -----cHHHHHHHHHHHHHHHhc-----------------------CCCCcEEEEEeChhHHHHHHHHHHhcccccceEE
Q 023794 55 -----SIETMCNDVLAVLKEMYG-----------------------EQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLV 106 (277)
Q Consensus 55 -----~~~~~~~d~~~~l~~l~~-----------------------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lv 106 (277)
-++.-+.++..+++.+.. .+.+++.++|||+||..++..+... .++++.|
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d--~r~~~~I 256 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD--TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc--cCcceEE
Confidence 011123344445544421 0235799999999999999888776 5799999
Q ss_pred EEccC
Q 023794 107 VVDVV 111 (277)
Q Consensus 107 l~~~~ 111 (277)
++++.
T Consensus 257 ~LD~W 261 (379)
T PF03403_consen 257 LLDPW 261 (379)
T ss_dssp EES--
T ss_pred EeCCc
Confidence 99873
No 131
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.13 E-value=9.4e-10 Score=81.66 Aligned_cols=110 Identities=15% Similarity=0.082 Sum_probs=74.6
Q ss_pred CCCCeEEEEccCCCCcccHH-HHHH---hhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcE
Q 023794 4 TEGPVIFCLHGGGYSGLSFA-LAAG---KIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSI 78 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~-~~~~---~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~ 78 (277)
+++..+||+||+..+...-- ..++ .+.-.-.++.|.+|..|.-........+...-...+.++|..|... +.+++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 47789999999988755432 2222 2211337999999988763222211235555667788888887655 56799
Q ss_pred EEEEeChhHHHHHHHHHHh----c----ccccceEEEEccCCC
Q 023794 79 VLVGHSMGGSVAVHVAAKK----T----LRSLHGLVVVDVVEG 113 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~~----p----~~~v~~lvl~~~~~~ 113 (277)
+|++||||+.+.+...... + ..++..+++++|...
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999999887652 1 025788888887543
No 132
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.13 E-value=3.8e-10 Score=78.64 Aligned_cols=190 Identities=12% Similarity=0.150 Sum_probs=111.5
Q ss_pred CCCeEEEEccCC----CCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC--CCCcE
Q 023794 5 EGPVIFCLHGGG----YSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE--QPPSI 78 (277)
Q Consensus 5 ~~p~vv~~HG~~----~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~ 78 (277)
..+.+||+||+- .-..+....-..+..+|+|..+++ +.+. ...++++...++...++...+- ..+.+
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~----q~htL~qt~~~~~~gv~filk~~~n~k~l 138 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCP----QVHTLEQTMTQFTHGVNFILKYTENTKVL 138 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCc----ccccHHHHHHHHHHHHHHHHHhcccceeE
Confidence 568899999952 223334455566667999998755 4443 2346777777777666655322 34567
Q ss_pred EEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhhhhc
Q 023794 79 VLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLS 158 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (277)
.+-|||.|+.+|+.+..+....+|.++++.++...... +........+.
T Consensus 139 ~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~E--------------------------L~~te~g~dlg----- 187 (270)
T KOG4627|consen 139 TFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRE--------------------------LSNTESGNDLG----- 187 (270)
T ss_pred EEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHH--------------------------HhCCccccccC-----
Confidence 77899999999999887744368999988775332110 00000000000
Q ss_pred CccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCC---chhhhhhhcCCccEEEeCCCC
Q 023794 159 IPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLD---RPLTIGQMQGKFQMVVVRHTG 235 (277)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~---~~~~~~~~~~~~~~~~~~~~g 235 (277)
+... . .... ......+..+++|+|++.+++|... ..........++++..+++.+
T Consensus 188 Lt~~-------~-------ae~~--------Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~ 245 (270)
T KOG4627|consen 188 LTER-------N-------AESV--------SCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYD 245 (270)
T ss_pred cccc-------h-------hhhc--------CccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcc
Confidence 0000 0 0000 0011123678899999999998532 222333344568899999999
Q ss_pred CcccccCh----HHHHHHHHHHH
Q 023794 236 HAIQEDAP----EEFASLILNFI 254 (277)
Q Consensus 236 H~~~~e~p----~~~~~~i~~fl 254 (277)
|+-.+++- ..+...+++|+
T Consensus 246 hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 246 HYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred hhhHHHHhccccchHHHHHHHHh
Confidence 99877643 34555555554
No 133
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.12 E-value=2.1e-10 Score=88.47 Aligned_cols=105 Identities=23% Similarity=0.310 Sum_probs=61.7
Q ss_pred CCCeEEEEccCCCCccc--------------H----HHHHHhhhh-cCeEEEEcCCCCCCCCCCCCC----CCcHHHH--
Q 023794 5 EGPVIFCLHGGGYSGLS--------------F----ALAAGKIKE-KARVVAMDLRGHGKSSSENDI----DLSIETM-- 59 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~--------------~----~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~----~~~~~~~-- 59 (277)
.-|.||++||-++..+. + ..+...|.+ ||-|+++|.+|+|+....... .++...+
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 55899999996654321 1 123556665 999999999999987654321 2222222
Q ss_pred -------------HHHHHHHHHHHhcC---CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 60 -------------CNDVLAVLKEMYGE---QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 60 -------------~~d~~~~l~~l~~~---~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
+-|....++.|... +.++|.++|+||||..++.+|+.. ++|++.|..+..
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD--dRIka~v~~~~l 259 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD--DRIKATVANGYL 259 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH---TT--EEEEES-B
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc--hhhHhHhhhhhh
Confidence 22344455666432 457999999999999999999997 589888887653
No 134
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.09 E-value=6.5e-09 Score=84.94 Aligned_cols=111 Identities=18% Similarity=0.299 Sum_probs=75.5
Q ss_pred CCCCeEEEEccCCCCcccHHHHHH-------------------hhhhcCeEEEEcCC-CCCCCCCCCCC--CCcHHHHHH
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAG-------------------KIKEKARVVAMDLR-GHGKSSSENDI--DLSIETMCN 61 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~-------------------~l~~~~~vi~~d~~-G~G~S~~~~~~--~~~~~~~~~ 61 (277)
.+.|.||++.|+++++..|..+.+ .+.+..+++-+|.| |.|.|...... ..+.++.++
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~ 117 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAE 117 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHH
T ss_pred CCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHHH
Confidence 367999999999999888755432 12235789999965 99999776542 357899999
Q ss_pred HHHHHHHHHhcC----CCCcEEEEEeChhHHHHHHHHHH----hc-----ccccceEEEEccCCCc
Q 023794 62 DVLAVLKEMYGE----QPPSIVLVGHSMGGSVAVHVAAK----KT-----LRSLHGLVVVDVVEGT 114 (277)
Q Consensus 62 d~~~~l~~l~~~----~~~~~~lvG~S~Gg~ia~~~a~~----~p-----~~~v~~lvl~~~~~~~ 114 (277)
|+.++|..+... ...+++|.|-|+||..+-.+|.. .. .-.++|+++.++....
T Consensus 118 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 118 DLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 999998876432 23489999999999987777754 21 1348899999987654
No 135
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.09 E-value=7e-11 Score=86.63 Aligned_cols=50 Identities=20% Similarity=0.331 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 61 NDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 61 ~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
+...++|......+.+++.|+|.|.||-+|+.+|..+| .|+++|.+++..
T Consensus 7 e~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~--~i~avVa~~ps~ 56 (213)
T PF08840_consen 7 EEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP--QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS--SEEEEEEES--S
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC--CccEEEEeCCce
Confidence 33444444433223468999999999999999999997 799999999865
No 136
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.08 E-value=1.3e-08 Score=72.27 Aligned_cols=175 Identities=19% Similarity=0.181 Sum_probs=103.3
Q ss_pred CCCeEEEEccCCCCcccHHH----HHHhhhhcCeEEEEcCCC----CCCCC--C-------C-------------C---C
Q 023794 5 EGPVIFCLHGGGYSGLSFAL----AAGKIKEKARVVAMDLRG----HGKSS--S-------E-------------N---D 51 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~----~~~~l~~~~~vi~~d~~G----~G~S~--~-------~-------------~---~ 51 (277)
.++-|||+||+-.+...|.. +...+.+-+..+.+|-|- -+.++ . + + .
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 56889999999999888753 344444456666666552 01110 0 0 0 0
Q ss_pred CCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcc-------cccceEEEEccCCCcchHHhHHHHH
Q 023794 52 IDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTL-------RSLHGLVVVDVVEGTAMASLIHMQK 124 (277)
Q Consensus 52 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~-------~~v~~lvl~~~~~~~~~~~~~~~~~ 124 (277)
....++.-.+-+.+.+... ++= --|+|+|.|+.++..++..... -.++=+|++++.......
T Consensus 84 ~~~~~eesl~yl~~~i~en---GPF-DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~------- 152 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKEN---GPF-DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK------- 152 (230)
T ss_pred cccChHHHHHHHHHHHHHh---CCC-ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch-------
Confidence 0123444455555555555 431 1599999999999998872110 124556666543211000
Q ss_pred HHHhhccchhhHHHHHHHhhcCCccccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEE
Q 023794 125 ILSTRMQHFSSIEKAIEWSVKGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKL 204 (277)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 204 (277)
. +.......+++|.|
T Consensus 153 ---------------~--------------------------------------------------~~~~~~~~i~~PSL 167 (230)
T KOG2551|consen 153 ---------------L--------------------------------------------------DESAYKRPLSTPSL 167 (230)
T ss_pred ---------------h--------------------------------------------------hhhhhccCCCCCee
Confidence 0 00001167899999
Q ss_pred EEEeCCCCCCchhhhh---hhcCCccEEEeCCCCCcccccCh--HHHHHHHHHHHHh
Q 023794 205 LLLAGTDRLDRPLTIG---QMQGKFQMVVVRHTGHAIQEDAP--EEFASLILNFIAR 256 (277)
Q Consensus 205 ~i~g~~D~~~~~~~~~---~~~~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~~ 256 (277)
-|.|+.|.+++..... +.+++..+..-+ +||+++-..+ +.+.+.|..|+++
T Consensus 168 Hi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 168 HIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred EEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHHh
Confidence 9999999998876544 445677666665 6999988765 4455555555544
No 137
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.05 E-value=1.8e-10 Score=83.69 Aligned_cols=88 Identities=20% Similarity=0.219 Sum_probs=53.0
Q ss_pred CeEEEEccCCC-CcccHHHHHHhhhh-cCe---EEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEE
Q 023794 7 PVIFCLHGGGY-SGLSFALAAGKIKE-KAR---VVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVL 80 (277)
Q Consensus 7 p~vv~~HG~~~-~~~~~~~~~~~l~~-~~~---vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~l 80 (277)
.||||+||.++ ....|..+.+.|.+ ||. |+++++-....+..... .....+.+..+.++++..... +. +|.|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~-~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQN-AHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHH-HHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccc-cccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 57999999988 66789999999976 898 89999843332111110 111233446677777665432 55 8999
Q ss_pred EEeChhHHHHHHHHHH
Q 023794 81 VGHSMGGSVAVHVAAK 96 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~ 96 (277)
|||||||.++-.+..-
T Consensus 80 VgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEETCHHHHHHHHHHH
T ss_pred EEcCCcCHHHHHHHHH
Confidence 9999999999888764
No 138
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.03 E-value=5.3e-09 Score=74.20 Aligned_cols=171 Identities=21% Similarity=0.217 Sum_probs=114.8
Q ss_pred CeEEEEccC-CCCcccHHHHHHhhhh-cCeEEEEcCC-CCCCCCCCCC-------CCCcHHHHHHHHHHHHHHHhcCC-C
Q 023794 7 PVIFCLHGG-GYSGLSFALAAGKIKE-KARVVAMDLR-GHGKSSSEND-------IDLSIETMCNDVLAVLKEMYGEQ-P 75 (277)
Q Consensus 7 p~vv~~HG~-~~~~~~~~~~~~~l~~-~~~vi~~d~~-G~G~S~~~~~-------~~~~~~~~~~d~~~~l~~l~~~~-~ 75 (277)
..||++--+ |-.-..-+..+..++. ||.|+++|+. |--.|..... ...+.+-.-.++..+++.+...+ .
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 356667664 4344446677777775 9999999975 3111211000 12355556678888888887655 5
Q ss_pred CcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccchhh
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNLDSA 155 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
+++-++|.+|||.++..+....| .+.+++.+-|....
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~--~f~a~v~~hps~~d----------------------------------------- 156 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP--EFDAGVSFHPSFVD----------------------------------------- 156 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch--hheeeeEecCCcCC-----------------------------------------
Confidence 78999999999999998888875 57777765442110
Q ss_pred hhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc------C--Ccc
Q 023794 156 RLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ------G--KFQ 227 (277)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~------~--~~~ 227 (277)
......+++|+|++.|+.|.++++.....+- + +.+
T Consensus 157 -------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~ 199 (242)
T KOG3043|consen 157 -------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQ 199 (242)
T ss_pred -------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccccee
Confidence 0112567899999999999998877554332 2 236
Q ss_pred EEEeCCCCCcccc-----cCh------HHHHHHHHHHHHhc
Q 023794 228 MVVVRHTGHAIQE-----DAP------EEFASLILNFIARN 257 (277)
Q Consensus 228 ~~~~~~~gH~~~~-----e~p------~~~~~~i~~fl~~~ 257 (277)
+.++++-+|.++. +.| |+..+.+.+|++..
T Consensus 200 v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 200 VKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred EEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 9999999998874 333 45666777777654
No 139
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.02 E-value=3.4e-10 Score=88.05 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=66.0
Q ss_pred CCCCeEEEEccCCCCc--ccHH-HHHHh-hh---hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHh---cC
Q 023794 4 TEGPVIFCLHGGGYSG--LSFA-LAAGK-IK---EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMY---GE 73 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~--~~~~-~~~~~-l~---~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~---~~ 73 (277)
.++|++|++|||..+. ..|- .+... +. ++++||++|+...-. ..............+.+..+|..|. +.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~-~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS-NNYPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS-S-HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc-ccccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 4689999999998777 3453 44443 43 379999999963211 1000001123444555556666554 23
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhccc--ccceEEEEccCCC
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLR--SLHGLVVVDVVEG 113 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~--~v~~lvl~~~~~~ 113 (277)
..++++|||||+||.+|-.++.... . +|..|+.++|+.+
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~-~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLK-GGGKIGRITGLDPAGP 188 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTT-T---SSEEEEES-B-T
T ss_pred ChhHEEEEeeccchhhhhhhhhhcc-CcceeeEEEecCcccc
Confidence 5679999999999999999999876 5 8999999999754
No 140
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=1.2e-08 Score=87.93 Aligned_cols=202 Identities=18% Similarity=0.174 Sum_probs=124.5
Q ss_pred CCCeEEEEccCCCCccc-------HHHHHHhhh-hcCeEEEEcCCCCCCCCCCC-----C--CCCcHHHHHHHHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLS-------FALAAGKIK-EKARVVAMDLRGHGKSSSEN-----D--IDLSIETMCNDVLAVLKE 69 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~-------~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~-----~--~~~~~~~~~~d~~~~l~~ 69 (277)
.-|.||.+||++++... |..+ ... .++.|+.+|.||-|.....- . ....++++...+..+++.
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~ 602 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKL 602 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhc
Confidence 45888999999874332 3333 233 38999999999976553321 0 134666666666666666
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCcc
Q 023794 70 MYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSL 149 (277)
Q Consensus 70 l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (277)
. ..+.+++.++|+|.||.++...+...|...+++.+.++|.............+ + +.
T Consensus 603 ~-~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~ter-----------------y-mg---- 659 (755)
T KOG2100|consen 603 P-FIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTER-----------------Y-MG---- 659 (755)
T ss_pred c-cccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHh-----------------h-cC----
Confidence 5 44678999999999999999999998734556659888865433111000000 0 00
Q ss_pred ccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccE-EEEEeCCCCCCchhhhhhhc-----
Q 023794 150 RNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPK-LLLLAGTDRLDRPLTIGQMQ----- 223 (277)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-l~i~g~~D~~~~~~~~~~~~----- 223 (277)
.+.. . ... +.. ......+..++.|. |++||+.|.-+..+....+.
T Consensus 660 ---------~p~~----~-~~~--y~e-------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~ 710 (755)
T KOG2100|consen 660 ---------LPSE----N-DKG--YEE-------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQN 710 (755)
T ss_pred ---------CCcc----c-cch--hhh-------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHH
Confidence 0000 0 000 000 01111224444555 99999999877655443332
Q ss_pred --CCccEEEeCCCCCcccccCh-HHHHHHHHHHHHhcCCC
Q 023794 224 --GKFQMVVVRHTGHAIQEDAP-EEFASLILNFIARNRIG 260 (277)
Q Consensus 224 --~~~~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~~~~~~ 260 (277)
-..++.++|+.+|.+..-.. ..+...+..|+..+...
T Consensus 711 ~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 711 AGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred CCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 12689999999999887654 66888899999876553
No 141
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.01 E-value=6.6e-08 Score=73.44 Aligned_cols=90 Identities=22% Similarity=0.305 Sum_probs=67.5
Q ss_pred CCCeEEEEccCCCCcccH------HHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhc----
Q 023794 5 EGPVIFCLHGGGYSGLSF------ALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYG---- 72 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~------~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~---- 72 (277)
....||+.-|.++..+.. +.....+++ +.+|+.+++||.|.|.+.. +.++++.|-.+.+++|..
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~~G 211 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEEQG 211 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhcccC
Confidence 457899999877654441 112223332 8999999999999998765 468999999999988863
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 73 EQPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 73 ~~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
.+.+.+++.|||+||.++..++..+.
T Consensus 212 ~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 212 PKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred CChheEEEeeccccHHHHHHHHHhcc
Confidence 24478999999999999998766643
No 142
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.00 E-value=2.1e-09 Score=86.55 Aligned_cols=95 Identities=13% Similarity=0.134 Sum_probs=71.8
Q ss_pred CCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEEEEeChhHHHHHHHH
Q 023794 17 YSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVLVGHSMGGSVAVHVA 94 (277)
Q Consensus 17 ~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~lvG~S~Gg~ia~~~a 94 (277)
.....|..+++.|.+ || +...|++|+|.+.+.. ...++..+++.++++.+... +.++++|+||||||.++..++
T Consensus 105 ~~~~~~~~li~~L~~~GY-~~~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGY-KEGKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred chHHHHHHHHHHHHHcCC-ccCCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHH
Confidence 445778999999988 65 4489999999987653 23556667777777665432 456899999999999999999
Q ss_pred HHhcc---cccceEEEEccCCCcc
Q 023794 95 AKKTL---RSLHGLVVVDVVEGTA 115 (277)
Q Consensus 95 ~~~p~---~~v~~lvl~~~~~~~~ 115 (277)
..+|+ ..|+++|.++++....
T Consensus 181 ~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 181 SLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHCCHhHHhHhccEEEECCCCCCC
Confidence 88872 2489999998865443
No 143
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.94 E-value=1.9e-08 Score=81.90 Aligned_cols=205 Identities=15% Similarity=0.153 Sum_probs=123.5
Q ss_pred CCCCCeEEEEccCCCCccc---HHH--H--HHhhhh-cCeEEEEcCCCCCCCCCCC-------CCCCcHHHHHHHHHHHH
Q 023794 3 GTEGPVIFCLHGGGYSGLS---FAL--A--AGKIKE-KARVVAMDLRGHGKSSSEN-------DIDLSIETMCNDVLAVL 67 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~---~~~--~--~~~l~~-~~~vi~~d~~G~G~S~~~~-------~~~~~~~~~~~d~~~~l 67 (277)
|..-|+++++=|+++-.-. |.. . ...|+. ||.|+.+|.||.-.-...- -....++++++-+.-+.
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~La 718 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLA 718 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHH
Confidence 5566899999998764332 321 1 234554 9999999999964332111 01346788888888888
Q ss_pred HHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCC
Q 023794 68 KEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGG 147 (277)
Q Consensus 68 ~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (277)
+..+-.+.++|.+-|+|+||.+++....++| +-++..|.=+|......-. ..+...
T Consensus 719 eq~gfidmdrV~vhGWSYGGYLSlm~L~~~P-~IfrvAIAGapVT~W~~YD-----------------------TgYTER 774 (867)
T KOG2281|consen 719 EQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP-NIFRVAIAGAPVTDWRLYD-----------------------TGYTER 774 (867)
T ss_pred HhcCcccchheeEeccccccHHHHHHhhcCc-ceeeEEeccCcceeeeeec-----------------------ccchhh
Confidence 8876667889999999999999999999999 8676666544432211000 000000
Q ss_pred ccccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc----
Q 023794 148 SLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ---- 223 (277)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~---- 223 (277)
.+ ..|.. .. ..+. ..-.....+.+..-+-..|++||--|.-+.-.....+.
T Consensus 775 YM--------g~P~~------nE-~gY~----------agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lv 829 (867)
T KOG2281|consen 775 YM--------GYPDN------NE-HGYG----------AGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALV 829 (867)
T ss_pred hc--------CCCcc------ch-hccc----------chhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHH
Confidence 00 00000 00 0000 00000112233444556799999999755443333222
Q ss_pred ---CCccEEEeCCCCCccc-ccChHHHHHHHHHHHHh
Q 023794 224 ---GKFQMVVVRHTGHAIQ-EDAPEEFASLILNFIAR 256 (277)
Q Consensus 224 ---~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 256 (277)
+..++.++|+--|.+- .|...-+...+..|+++
T Consensus 830 kagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 830 KAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred hCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 3458999999999885 44446788889999876
No 144
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.84 E-value=6.9e-08 Score=68.12 Aligned_cols=104 Identities=17% Similarity=0.246 Sum_probs=72.2
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCC-----------------CCCCCCCCcHHHHHHHHHHHH
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKS-----------------SSENDIDLSIETMCNDVLAVL 67 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S-----------------~~~~~~~~~~~~~~~d~~~~l 67 (277)
..+||++||.+.+...|..++..|.- +...|++.-|-.-.+ .........+...++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 35799999999999999877776653 566666643321111 000111345666677788888
Q ss_pred HHHhcC--CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEcc
Q 023794 68 KEMYGE--QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 68 ~~l~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~ 110 (277)
+..-.. ...++.+-|.|+||++++..+..+| ..+.+++-..+
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~-~~l~G~~~~s~ 126 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYP-KALGGIFALSG 126 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccc-cccceeecccc
Confidence 776433 3468899999999999999999998 77777776554
No 145
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.83 E-value=3.1e-08 Score=74.84 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=74.2
Q ss_pred CCCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 3 GTEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
|.+...|||.-|..+-.+.= -+..-++-+|.|+.+++||++.|.+.+- ...-...++.+.++.-+..+-..+.++|.|
T Consensus 240 ~ngq~LvIC~EGNAGFYEvG-~m~tP~~lgYsvLGwNhPGFagSTG~P~-p~n~~nA~DaVvQfAI~~Lgf~~edIilyg 317 (517)
T KOG1553|consen 240 GNGQDLVICFEGNAGFYEVG-VMNTPAQLGYSVLGWNHPGFAGSTGLPY-PVNTLNAADAVVQFAIQVLGFRQEDIILYG 317 (517)
T ss_pred CCCceEEEEecCCccceEee-eecChHHhCceeeccCCCCccccCCCCC-cccchHHHHHHHHHHHHHcCCCccceEEEE
Confidence 43456677777754432221 1122234499999999999999988763 333333444455544443333457899999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEccCCCcch
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAM 116 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~ 116 (277)
+|.||.-+..+|..|| + |+++||-++......
T Consensus 318 WSIGGF~~~waAs~YP-d-VkavvLDAtFDDllp 349 (517)
T KOG1553|consen 318 WSIGGFPVAWAASNYP-D-VKAVVLDATFDDLLP 349 (517)
T ss_pred eecCCchHHHHhhcCC-C-ceEEEeecchhhhhh
Confidence 9999999999999999 4 999999777654433
No 146
>PLN02606 palmitoyl-protein thioesterase
Probab=98.81 E-value=1.8e-06 Score=65.32 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=70.8
Q ss_pred CCCeEEEEccCC--CCcccHHHHHHhhh--hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 5 EGPVIFCLHGGG--YSGLSFALAAGKIK--EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 5 ~~p~vv~~HG~~--~~~~~~~~~~~~l~--~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
...|||+.||++ ++...+..+.+.+. .++.+..+- .|-+. ..+.-..+.++++.+.+.|...... .+-+++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L-~~G~na 99 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKEL-SEGYNI 99 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhh-cCceEE
Confidence 456899999998 55556778887776 255554444 23221 1222346677777777777653221 235999
Q ss_pred EEeChhHHHHHHHHHHhcc-cccceEEEEccCC
Q 023794 81 VGHSMGGSVAVHVAAKKTL-RSLHGLVVVDVVE 112 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~-~~v~~lvl~~~~~ 112 (277)
+|+|.||.++-.++.+.|. ..|+.+|.+++..
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999999883 2699999998763
No 147
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.79 E-value=6.9e-07 Score=64.87 Aligned_cols=106 Identities=21% Similarity=0.172 Sum_probs=78.0
Q ss_pred CeEEEEccCCCCcccHHHHHHhhhhcC------eEEEEcCCCC----CCCCCCC----------CCCCcHHHHHHHHHHH
Q 023794 7 PVIFCLHGGGYSGLSFALAAGKIKEKA------RVVAMDLRGH----GKSSSEN----------DIDLSIETMCNDVLAV 66 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~~~~~~l~~~~------~vi~~d~~G~----G~S~~~~----------~~~~~~~~~~~d~~~~ 66 (277)
-|.|||||.+++......++..|.+.+ -++.+|--|- |.=+... ....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 368999999999999999998887655 2556666652 1111111 1235677788889999
Q ss_pred HHHHhcC-CCCcEEEEEeChhHHHHHHHHHHhccc----ccceEEEEccCC
Q 023794 67 LKEMYGE-QPPSIVLVGHSMGGSVAVHVAAKKTLR----SLHGLVVVDVVE 112 (277)
Q Consensus 67 l~~l~~~-~~~~~~lvG~S~Gg~ia~~~a~~~p~~----~v~~lvl~~~~~ 112 (277)
+..|... +.+++.+|||||||.-...|+..+..+ .+..+|.+++..
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 9988755 567899999999999999999886311 488888887644
No 148
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.79 E-value=1.9e-06 Score=69.18 Aligned_cols=82 Identities=18% Similarity=0.210 Sum_probs=62.9
Q ss_pred HHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC--CCcEEEEEeChhHHHHHHHHHHhcccc
Q 023794 24 LAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQ--PPSIVLVGHSMGGSVAVHVAAKKTLRS 101 (277)
Q Consensus 24 ~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~~ 101 (277)
.+--.|..|+.|+.+.+. .++. ...++++......++++.+.... ..+.+|+|.+.||..++.+|+.+| +.
T Consensus 92 evG~AL~~GHPvYFV~F~----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P-d~ 164 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFF----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP-DL 164 (581)
T ss_pred HHHHHHHcCCCeEEEEec----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc-Cc
Confidence 355567779888888775 1222 35689998888888888775432 237899999999999999999999 98
Q ss_pred cceEEEEccCC
Q 023794 102 LHGLVVVDVVE 112 (277)
Q Consensus 102 v~~lvl~~~~~ 112 (277)
+..+|+-+++.
T Consensus 165 ~gplvlaGaPl 175 (581)
T PF11339_consen 165 VGPLVLAGAPL 175 (581)
T ss_pred cCceeecCCCc
Confidence 88888877653
No 149
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.78 E-value=1.4e-07 Score=72.67 Aligned_cols=81 Identities=22% Similarity=0.167 Sum_probs=49.7
Q ss_pred HHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHh---c-CC---CCcEEEEEeChhHHHHHHHHHHh
Q 023794 25 AAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMY---G-EQ---PPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 25 ~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~---~-~~---~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
+...|.+||.|++.|+.|.|.... .-...+..+.+.++..+ . .+ ..++.++|||-||.-++..|...
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~~y~------~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGTPYL------NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCCccc------CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 456677899999999999987221 11222333333333222 1 12 25899999999999887766442
Q ss_pred ----cccc--cceEEEEccC
Q 023794 98 ----TLRS--LHGLVVVDVV 111 (277)
Q Consensus 98 ----p~~~--v~~lvl~~~~ 111 (277)
|+-. +.+.+..+++
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~ 112 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPP 112 (290)
T ss_pred HHhCcccccceeEEeccCCc
Confidence 4223 6677666554
No 150
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.74 E-value=1.1e-07 Score=70.65 Aligned_cols=107 Identities=21% Similarity=0.262 Sum_probs=73.2
Q ss_pred CCCCeEEEEccCCCCcccHHHHH--Hhhhh--cCeEEEEcCC-------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHh-
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAA--GKIKE--KARVVAMDLR-------GHGKSSSENDIDLSIETMCNDVLAVLKEMY- 71 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~--~~l~~--~~~vi~~d~~-------G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~- 71 (277)
.+.|.||++||..++........ +.|++ +|-|..+|-- +++.+..+.+..-.. +-+..|.+++..+.
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~-ddVgflr~lva~l~~ 137 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGV-DDVGFLRALVAKLVN 137 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCc-cHHHHHHHHHHHHHH
Confidence 35689999999998887766554 45554 8999988532 233332222111112 22344555555543
Q ss_pred --cCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 72 --GEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 72 --~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
..++.+|++.|.|-||.++..++..+| +.+.++..++...
T Consensus 138 ~~gidp~RVyvtGlS~GG~Ma~~lac~~p-~~faa~A~VAg~~ 179 (312)
T COG3509 138 EYGIDPARVYVTGLSNGGRMANRLACEYP-DIFAAIAPVAGLL 179 (312)
T ss_pred hcCcCcceEEEEeeCcHHHHHHHHHhcCc-ccccceeeeeccc
Confidence 225569999999999999999999999 9999999888754
No 151
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.71 E-value=8.6e-08 Score=71.66 Aligned_cols=105 Identities=19% Similarity=0.169 Sum_probs=59.8
Q ss_pred CCCeEEEEccCCCCc---ccHHHHHHhhhh---cCeEEEEcCCCCCCC-CCCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Q 023794 5 EGPVIFCLHGGGYSG---LSFALAAGKIKE---KARVVAMDLRGHGKS-SSENDIDLSIETMCNDVLAVLKEMYGEQPPS 77 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~---~~~~~~~~~l~~---~~~vi~~d~~G~G~S-~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 77 (277)
...|||+.||+|.+. ..+..+...+.+ |.-|.+++. |-+.+ +...+.-..+.++++.+.+.+....... +-
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~-~G 81 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELA-NG 81 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGT-T-
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhh-cc
Confidence 446899999998754 356666655554 666777776 32221 1111112356777777777777643211 35
Q ss_pred EEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
++++|+|.||.++-.++.+.|...|..+|.+++.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 9999999999999999999874579999999876
No 152
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.70 E-value=1.3e-06 Score=62.13 Aligned_cols=101 Identities=23% Similarity=0.287 Sum_probs=74.1
Q ss_pred CCCeEEEEccCCCCccc---HHHHHHhhhh-cCeEEEEcCC----CCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-C
Q 023794 5 EGPVIFCLHGGGYSGLS---FALAAGKIKE-KARVVAMDLR----GHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQ-P 75 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~---~~~~~~~l~~-~~~vi~~d~~----G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~-~ 75 (277)
.+..||||-|++..--. -..+...|.+ ++.++-+.++ |+| ..++.+-++|+..+++++..-+ .
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~G--------t~slk~D~edl~~l~~Hi~~~~fS 106 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYG--------TFSLKDDVEDLKCLLEHIQLCGFS 106 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccc--------cccccccHHHHHHHHHHhhccCcc
Confidence 34568889888765332 3566777766 8998888876 333 3467777999999999886432 3
Q ss_pred CcEEEEEeChhHHHHHHHHHH--hcccccceEEEEccCCCc
Q 023794 76 PSIVLVGHSMGGSVAVHVAAK--KTLRSLHGLVVVDVVEGT 114 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~--~p~~~v~~lvl~~~~~~~ 114 (277)
..|+|+|||.|+.=.+.|... .| ..|.+.|+.+|....
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~-r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKD-RKIRAAILQAPVSDR 146 (299)
T ss_pred cceEEEecCccchHHHHHHHhccch-HHHHHHHHhCccchh
Confidence 489999999999999988833 34 678888888876543
No 153
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.69 E-value=6.3e-06 Score=64.08 Aligned_cols=107 Identities=18% Similarity=0.151 Sum_probs=72.0
Q ss_pred CCCeEEEEccCCCCccc---HHHHHHhhhh-cCeEEEEcCCCC--CCCCC----------CCCC----C-----------
Q 023794 5 EGPVIFCLHGGGYSGLS---FALAAGKIKE-KARVVAMDLRGH--GKSSS----------ENDI----D----------- 53 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~---~~~~~~~l~~-~~~vi~~d~~G~--G~S~~----------~~~~----~----------- 53 (277)
..-.||++||.+.+... -..+...|.+ |+..+++.+|.- ..... .... .
T Consensus 86 ~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 165 (310)
T PF12048_consen 86 PQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQE 165 (310)
T ss_pred CceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccH
Confidence 34589999999887653 4566677776 999999988861 10000 0000 0
Q ss_pred -----CcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 54 -----LSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 54 -----~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
...+.+..-+.+.+..+...+.++++|+||+.|+.+++.+....+...+.++|++++-
T Consensus 166 ~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 166 AEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 0112333344555555554455569999999999999999999875569999999974
No 154
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.68 E-value=4.9e-06 Score=62.68 Aligned_cols=219 Identities=13% Similarity=0.153 Sum_probs=111.5
Q ss_pred eEEEEccCCCCcc-cHHHHHHhhh-hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 8 VIFCLHGGGYSGL-SFALAAGKIK-EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 8 ~vv~~HG~~~~~~-~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
|||++=||.+... ...+..+... .|++++.+-.+-.....+. -.+...++.+.+.+......+..++++-.+|.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 4777888764433 3344444433 4899998877632211111 23445555555555544322223799999999
Q ss_pred hHHHHHHHHHH---------hcccccceEEEEccCCCcchH-HhHHHHHHHHhhccc-hhhHHHHHHHhhcCCccccchh
Q 023794 86 GGSVAVHVAAK---------KTLRSLHGLVVVDVVEGTAMA-SLIHMQKILSTRMQH-FSSIEKAIEWSVKGGSLRNLDS 154 (277)
Q Consensus 86 Gg~ia~~~a~~---------~p~~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
||...+..... .+..+++++|+-+++...... ....+...+...... +.............. ...
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 152 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLS----IIS 152 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHH----HHH
Confidence 88877665442 111248888876665433221 111111111110000 000000000000000 000
Q ss_pred hhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc-------CCcc
Q 023794 155 ARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ-------GKFQ 227 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-------~~~~ 227 (277)
..................+. ......+|.|+|.+..|.+++.+.+++.. -.++
T Consensus 153 ------------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~ 212 (240)
T PF05705_consen 153 ------------------YFIFGYPDVQEYYRRALNDF--ANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVR 212 (240)
T ss_pred ------------------HHHhcCCcHHHHHHHHHhhh--hcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEE
Confidence 00000000000111111111 11455689999999999999988766654 2367
Q ss_pred EEEeCCCCCccccc-ChHHHHHHHHHHH
Q 023794 228 MVVVRHTGHAIQED-APEEFASLILNFI 254 (277)
Q Consensus 228 ~~~~~~~gH~~~~e-~p~~~~~~i~~fl 254 (277)
...++++.|..|+. +|++..+.+.+|+
T Consensus 213 ~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 213 AEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred EecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 88899999999865 7899999999885
No 155
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.68 E-value=1e-07 Score=70.34 Aligned_cols=89 Identities=13% Similarity=0.135 Sum_probs=51.8
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhh---cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHh-cCC--CCcE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKE---KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMY-GEQ--PPSI 78 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~---~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~-~~~--~~~~ 78 (277)
....|||+||+.++...|..+...+.. ++.--.+...++...... ....++..++.+.+.|.... ... ..++
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~--T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK--TFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc--cchhhHHHHHHHHHHHHHhccccccccccc
Confidence 456899999999999999888776654 232112222222111111 12345555555443333322 112 2479
Q ss_pred EEEEeChhHHHHHHHHH
Q 023794 79 VLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~ 95 (277)
.+|||||||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999865554
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.60 E-value=5.5e-07 Score=73.13 Aligned_cols=177 Identities=20% Similarity=0.254 Sum_probs=109.7
Q ss_pred CCCeEEEEccCC----CCccc--HHHHHHhhhhcCeEEEEcCCC-CCCCCCCCCCCCcHHHHHHHHHHHHHHH----hcC
Q 023794 5 EGPVIFCLHGGG----YSGLS--FALAAGKIKEKARVVAMDLRG-HGKSSSENDIDLSIETMCNDVLAVLKEM----YGE 73 (277)
Q Consensus 5 ~~p~vv~~HG~~----~~~~~--~~~~~~~l~~~~~vi~~d~~G-~G~S~~~~~~~~~~~~~~~d~~~~l~~l----~~~ 73 (277)
..|.++++||.+ .+.++ |........+-..|-+||++. .| ..++..-++-+..+.+.. .+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~ig--------G~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIG--------GANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCC--------CcchHHHHHHHHHHhhhhhhhhhcc
Confidence 357899999987 12222 333333344456777888873 22 235556566665555522 111
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHHhhccchhhHHHHHHHhhcCCccccc
Q 023794 74 -QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSSIEKAIEWSVKGGSLRNL 152 (277)
Q Consensus 74 -~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (277)
...+++|+|.|||+.++.+.+...-...|.++|+++-+.......
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp---------------------------------- 292 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP---------------------------------- 292 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc----------------------------------
Confidence 345899999999988887777654323488888876422111000
Q ss_pred hhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc----CCccE
Q 023794 153 DSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ----GKFQM 228 (277)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~----~~~~~ 228 (277)
.. ...+.+..++.|+|++.|.+|..+++..++++. ...++
T Consensus 293 --------rg----------------------------irDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~el 336 (784)
T KOG3253|consen 293 --------RG----------------------------IRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVEL 336 (784)
T ss_pred --------cC----------------------------CcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceE
Confidence 00 011233567899999999999999988877655 45589
Q ss_pred EEeCCCCCcccccC---------hHH----HHHHHHHHHHhcCC
Q 023794 229 VVVRHTGHAIQEDA---------PEE----FASLILNFIARNRI 259 (277)
Q Consensus 229 ~~~~~~gH~~~~e~---------p~~----~~~~i~~fl~~~~~ 259 (277)
+++.+++|.+-.-. .++ +.+.|.+|+.....
T Consensus 337 hVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~~l~ 380 (784)
T KOG3253|consen 337 HVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTIALN 380 (784)
T ss_pred EEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999875433 133 44566666655443
No 157
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.59 E-value=1.5e-05 Score=60.42 Aligned_cols=102 Identities=14% Similarity=0.084 Sum_probs=70.5
Q ss_pred CCCeEEEEccCCCCccc--HHHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 5 EGPVIFCLHGGGYSGLS--FALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
...|+|+.||+|.+... ...+.+.+.+ |..+.++.. |.+ ...+.-..+.++++.+.+.+...... .+-+++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l-~~G~na 98 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKEL-SQGYNI 98 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhh-hCcEEE
Confidence 34679999999877554 4455555543 566666544 333 22234456778888877777663221 235999
Q ss_pred EEeChhHHHHHHHHHHhcc-cccceEEEEccC
Q 023794 81 VGHSMGGSVAVHVAAKKTL-RSLHGLVVVDVV 111 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~-~~v~~lvl~~~~ 111 (277)
+|+|.||.++-.++.+.|. ..|..+|.+++.
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999883 269999999876
No 158
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.58 E-value=7.1e-07 Score=66.81 Aligned_cols=106 Identities=17% Similarity=0.314 Sum_probs=69.7
Q ss_pred CCCCCeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCC------CC-CC---------------CC-C----
Q 023794 3 GTEGPVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSS------SE-ND---------------ID-L---- 54 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~------~~-~~---------------~~-~---- 54 (277)
+++=|.|||-||++++...|..++-.|+. ||-|.+++.|-+-.+. .. ++ .. +
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 44569999999999999999999998987 9999999998654331 00 00 00 0
Q ss_pred -cHHHHHHHHHHH---HHHH--------------------hc-CCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEc
Q 023794 55 -SIETMCNDVLAV---LKEM--------------------YG-EQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVD 109 (277)
Q Consensus 55 -~~~~~~~d~~~~---l~~l--------------------~~-~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~ 109 (277)
.+..-++..... |+.+ ++ .+-.++.++|||+||+.++.....+ ..+++.|+++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~--t~FrcaI~lD 272 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH--TDFRCAIALD 272 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc--cceeeeeeee
Confidence 011112222222 2111 10 0224688999999999999888776 5788888887
Q ss_pred c
Q 023794 110 V 110 (277)
Q Consensus 110 ~ 110 (277)
.
T Consensus 273 ~ 273 (399)
T KOG3847|consen 273 A 273 (399)
T ss_pred e
Confidence 5
No 159
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.58 E-value=7.5e-07 Score=73.15 Aligned_cols=106 Identities=23% Similarity=0.254 Sum_probs=70.9
Q ss_pred CCCeEEEEccCCCCcccH---HHHHHhhhh--cCeEEEEcCCCCCCCCCCCC------CCCcHHHHHHHHHHHHHHHhcC
Q 023794 5 EGPVIFCLHGGGYSGLSF---ALAAGKIKE--KARVVAMDLRGHGKSSSEND------IDLSIETMCNDVLAVLKEMYGE 73 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~---~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~------~~~~~~~~~~d~~~~l~~l~~~ 73 (277)
++|++|++ |+-++...+ ..+...|++ +--++++.+|-||.|.+-.+ .-.+.++..+|+..+++++...
T Consensus 28 ~gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 46666666 444433322 235555665 78899999999999986432 1358999999999999988622
Q ss_pred ----CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 74 ----QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 74 ----~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
...|++++|-|+||++|..+-.+|| +.|.+.+..+++.
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP-~~~~ga~ASSapv 148 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYP-HLFDGAWASSAPV 148 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-T-TT-SEEEEET--C
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCC-CeeEEEEecccee
Confidence 2348999999999999999999999 9999999988763
No 160
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.54 E-value=2.6e-06 Score=61.51 Aligned_cols=80 Identities=21% Similarity=0.254 Sum_probs=55.1
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCe-EEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKAR-VVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGH 83 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~-vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~ 83 (277)
++..|||+.|||++...+.++. +.+++. ++++|+|-. +++. | +. ..+.++|||+
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l-----------~~d~---~----~~-----~y~~i~lvAW 64 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDL-----------DFDF---D----LS-----GYREIYLVAW 64 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCccc-----------cccc---c----cc-----cCceEEEEEE
Confidence 3578999999999998887764 234444 467888821 1110 1 11 3467999999
Q ss_pred ChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 84 SMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 84 S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
|||-.+|-++....| ++..+.+++.+
T Consensus 65 SmGVw~A~~~l~~~~---~~~aiAINGT~ 90 (213)
T PF04301_consen 65 SMGVWAANRVLQGIP---FKRAIAINGTP 90 (213)
T ss_pred eHHHHHHHHHhccCC---cceeEEEECCC
Confidence 999999988766544 66777777654
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=98.53 E-value=1.5e-05 Score=54.31 Aligned_cols=87 Identities=21% Similarity=0.234 Sum_probs=62.7
Q ss_pred EEEEccCCCCcccHHHH--HHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChh
Q 023794 9 IFCLHGGGYSGLSFALA--AGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMG 86 (277)
Q Consensus 9 vv~~HG~~~~~~~~~~~--~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~G 86 (277)
||++||+.+|....+.. .+.+.+..+-+.+--| . ........++.+..++..+ +.+...|+|.|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p-------~--l~h~p~~a~~ele~~i~~~---~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTP-------H--LPHDPQQALKELEKAVQEL---GDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecC-------C--CCCCHHHHHHHHHHHHHHc---CCCCceEEeecch
Confidence 89999999999888754 3455554444444333 2 1357888889999999888 4344799999999
Q ss_pred HHHHHHHHHHhcccccceEEEEccC
Q 023794 87 GSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 87 g~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
|+.|.+++.++. +++++ ++|.
T Consensus 70 GY~At~l~~~~G---irav~-~NPa 90 (191)
T COG3150 70 GYYATWLGFLCG---IRAVV-FNPA 90 (191)
T ss_pred HHHHHHHHHHhC---Chhhh-cCCC
Confidence 999999999874 55544 4553
No 162
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.53 E-value=4.3e-07 Score=71.47 Aligned_cols=102 Identities=21% Similarity=0.167 Sum_probs=72.5
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhh-cCe---EEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKE-KAR---VVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~---vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lv 81 (277)
.-+++++||++.+...|..+...+.. ++. ++.++.++.. . ........+.+..-+.+++... +.+++.|+
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~--~~~~~~~~~ql~~~V~~~l~~~---ga~~v~Li 132 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD-G--TYSLAVRGEQLFAYVDEVLAKT---GAKKVNLI 132 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC-C--CccccccHHHHHHHHHHHHhhc---CCCceEEE
Confidence 34899999998888889888777765 666 8888888651 1 1111234444444555555544 55789999
Q ss_pred EeChhHHHHHHHHHHhcc-cccceEEEEccCCC
Q 023794 82 GHSMGGSVAVHVAAKKTL-RSLHGLVVVDVVEG 113 (277)
Q Consensus 82 G~S~Gg~ia~~~a~~~p~-~~v~~lvl~~~~~~ 113 (277)
||||||.++..++...+. ..|+.++.++++..
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 999999999988877531 57999999988643
No 163
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.52 E-value=5.1e-07 Score=67.09 Aligned_cols=102 Identities=24% Similarity=0.251 Sum_probs=63.6
Q ss_pred CeEEEEccCCCCcccHHH-HHHhh-------hh-cCeEEEEcC-CCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCC
Q 023794 7 PVIFCLHGGGYSGLSFAL-AAGKI-------KE-KARVVAMDL-RGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPP 76 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~~-~~~~l-------~~-~~~vi~~d~-~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 76 (277)
|.|||+||.+.....-.. +..-+ .+ ++-|+++.+ +=+-.++... ..-.....+-+.+.+..-...+..
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t--~~~l~~~idli~~vlas~ynID~s 269 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT--LLYLIEKIDLILEVLASTYNIDRS 269 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccccc--chhHHHHHHHHHHHHhhccCcccc
Confidence 899999998876665432 22111 11 344555552 1122232211 112333333444344443344567
Q ss_pred cEEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 77 SIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 77 ~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
+++++|.|+||+-++.++.++| +.+++.+++++.
T Consensus 270 RIYviGlSrG~~gt~al~~kfP-dfFAaa~~iaG~ 303 (387)
T COG4099 270 RIYVIGLSRGGFGTWALAEKFP-DFFAAAVPIAGG 303 (387)
T ss_pred eEEEEeecCcchhhHHHHHhCc-hhhheeeeecCC
Confidence 9999999999999999999999 999999999863
No 164
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.51 E-value=1.1e-06 Score=67.42 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=69.2
Q ss_pred CCCCeEEEEccCCCCccc-HHHHH---HhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcE
Q 023794 4 TEGPVIFCLHGGGYSGLS-FALAA---GKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSI 78 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~-~~~~~---~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~ 78 (277)
.++..+||+||+..+-.. -..++ .........+.+.+|-.|.--...-...+.+.-..++..+|+.|... ..+++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 357889999998765433 22223 33333677889999976653222211234445556677777777544 35789
Q ss_pred EEEEeChhHHHHHHHHHHh--------cccccceEEEEccC
Q 023794 79 VLVGHSMGGSVAVHVAAKK--------TLRSLHGLVVVDVV 111 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~~--------p~~~v~~lvl~~~~ 111 (277)
+|++||||..++++....- + .+|+-+|+-+|-
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~-~ki~nViLAaPD 233 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLP-AKIKNVILAAPD 233 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchh-hhhhheEeeCCC
Confidence 9999999999999887652 2 356667776653
No 165
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.48 E-value=2.2e-07 Score=70.58 Aligned_cols=56 Identities=18% Similarity=0.347 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 57 ETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 57 ~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
+.+.++|...|+.-.....++..++|+||||..|+.++.++| +.+.+++.+++...
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~P-d~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHP-DLFGAVIAFSGALD 151 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHST-TTESEEEEESEESE
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCc-cccccccccCcccc
Confidence 345567777777654333333799999999999999999999 99999999997643
No 166
>PLN02209 serine carboxypeptidase
Probab=98.48 E-value=1.6e-05 Score=64.76 Aligned_cols=109 Identities=21% Similarity=0.268 Sum_probs=71.8
Q ss_pred CCCeEEEEccCCCCcccHHHHHH----------------hh-------hhcCeEEEEcC-CCCCCCCCCCCC-CCcHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAG----------------KI-------KEKARVVAMDL-RGHGKSSSENDI-DLSIETM 59 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~----------------~l-------~~~~~vi~~d~-~G~G~S~~~~~~-~~~~~~~ 59 (277)
+.|.|+++.|+++++..+..+.+ .+ .+..+++-+|. .|.|.|....+. ..+-++.
T Consensus 67 ~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (437)
T PLN02209 67 EDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSE 146 (437)
T ss_pred CCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 56999999999888777643321 11 12467999995 488988644321 2233355
Q ss_pred HHHHHHHHHHHhcC----CCCcEEEEEeChhHHHHHHHHHHh---------cccccceEEEEccCCC
Q 023794 60 CNDVLAVLKEMYGE----QPPSIVLVGHSMGGSVAVHVAAKK---------TLRSLHGLVVVDVVEG 113 (277)
Q Consensus 60 ~~d~~~~l~~l~~~----~~~~~~lvG~S~Gg~ia~~~a~~~---------p~~~v~~lvl~~~~~~ 113 (277)
++|+.++|...... ...+++|.|.|+||..+-.+|..- +.-.++++++.++...
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 67888777765432 224799999999998777776542 1024678898887654
No 167
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.47 E-value=3.2e-06 Score=68.34 Aligned_cols=106 Identities=14% Similarity=0.093 Sum_probs=63.7
Q ss_pred CCCeEEEEccCC--CCcccHHHHHHhhhhc----CeEEEEcCCCC-CCCCCCCCCCCcHHHHHHHHHHHHHHHhc--CCC
Q 023794 5 EGPVIFCLHGGG--YSGLSFALAAGKIKEK----ARVVAMDLRGH-GKSSSENDIDLSIETMCNDVLAVLKEMYG--EQP 75 (277)
Q Consensus 5 ~~p~vv~~HG~~--~~~~~~~~~~~~l~~~----~~vi~~d~~G~-G~S~~~~~~~~~~~~~~~d~~~~l~~l~~--~~~ 75 (277)
.-|+|+++||.. .....+..+-..+.+| .-++.+|..+. .++........-.+.+++++.-.++.... .+.
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 458999999943 2222232233333333 33566665321 11111111111233445666666665422 144
Q ss_pred CcEEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
++.+|+|+||||..|+.++..+| +.+.+++.+++.
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~P-d~Fg~v~s~Sgs 322 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWP-ERFGCVLSQSGS 322 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCc-ccccEEEEeccc
Confidence 67899999999999999999999 999999999874
No 168
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.43 E-value=4.7e-05 Score=62.01 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=68.5
Q ss_pred CCCeEEEEccCCCCcccHHHHH---H-------------hh-------hhcCeEEEEcC-CCCCCCCCCCCCCCc-HHHH
Q 023794 5 EGPVIFCLHGGGYSGLSFALAA---G-------------KI-------KEKARVVAMDL-RGHGKSSSENDIDLS-IETM 59 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~---~-------------~l-------~~~~~vi~~d~-~G~G~S~~~~~~~~~-~~~~ 59 (277)
+.|.|+++.|+++.+..+..+. + .+ .+..+++-+|. -|.|.|.......++ -.+.
T Consensus 65 ~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~~ 144 (433)
T PLN03016 65 EDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDISE 144 (433)
T ss_pred cCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 5699999999988776542221 1 11 12467999995 589998654322221 1233
Q ss_pred HHHHHHHHHHHhcC----CCCcEEEEEeChhHHHHHHHHHHh---------cccccceEEEEccCC
Q 023794 60 CNDVLAVLKEMYGE----QPPSIVLVGHSMGGSVAVHVAAKK---------TLRSLHGLVVVDVVE 112 (277)
Q Consensus 60 ~~d~~~~l~~l~~~----~~~~~~lvG~S~Gg~ia~~~a~~~---------p~~~v~~lvl~~~~~ 112 (277)
++++.+++...... ...+++|.|.|+||..+-.+|..- +.-.++|+++-++..
T Consensus 145 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 145 VKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 46666666654321 235799999999999777776542 112578998888754
No 169
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.36 E-value=4e-06 Score=67.52 Aligned_cols=87 Identities=18% Similarity=0.245 Sum_probs=64.0
Q ss_pred cHHHHHHhhhh-cCe------EEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHH
Q 023794 21 SFALAAGKIKE-KAR------VVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHV 93 (277)
Q Consensus 21 ~~~~~~~~l~~-~~~------vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~ 93 (277)
.|..+++.|.+ ||. ..-+|+|= .+ ...+++...+...|+.......++|+|+||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~------~~---~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL------SP---AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh------ch---hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHH
Confidence 58889998876 553 23378871 11 1455777788888887755446799999999999999999
Q ss_pred HHHhcc-----cccceEEEEccCCCcch
Q 023794 94 AAKKTL-----RSLHGLVVVDVVEGTAM 116 (277)
Q Consensus 94 a~~~p~-----~~v~~lvl~~~~~~~~~ 116 (277)
....+. ..|+++|.++++.....
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs~ 164 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGSP 164 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCCh
Confidence 988642 35999999998765443
No 170
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=2e-05 Score=57.99 Aligned_cols=98 Identities=20% Similarity=0.201 Sum_probs=73.0
Q ss_pred CeEEEEccCCCCccc--HHHHHHhhhh--cCeEEEEcCCCCC--CCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 7 PVIFCLHGGGYSGLS--FALAAGKIKE--KARVVAMDLRGHG--KSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 7 p~vv~~HG~~~~~~~--~~~~~~~l~~--~~~vi~~d~~G~G--~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
-|+|++||++.+... ...+.+.+.+ |..|++.|. |-| .| .-....++++.+.+.+..... -..-+++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s-----~l~pl~~Qv~~~ce~v~~m~~-lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDS-----SLMPLWEQVDVACEKVKQMPE-LSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchh-----hhccHHHHHHHHHHHHhcchh-ccCceEE
Confidence 579999999887776 6777777776 788999987 555 22 233566777777766663321 1345899
Q ss_pred EEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 81 VGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
+|.|.||.++-.++..-+...|..+|.++++
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999999999988664579999988875
No 171
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.24 E-value=1.6e-06 Score=71.06 Aligned_cols=107 Identities=19% Similarity=0.125 Sum_probs=74.0
Q ss_pred CCCCeEEEEccCCCCcc---cH--HHHHH----hhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC
Q 023794 4 TEGPVIFCLHGGGYSGL---SF--ALAAG----KIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQ 74 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~---~~--~~~~~----~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 74 (277)
+..|+++..+-++-... .+ ....+ ..++||.|+..|.||.|.|++.-...++ +-++|-.+.|+.+..+.
T Consensus 43 g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~--~E~~Dg~D~I~Wia~Qp 120 (563)
T COG2936 43 GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESS--REAEDGYDTIEWLAKQP 120 (563)
T ss_pred CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecc--ccccchhHHHHHHHhCC
Confidence 35677777773222222 11 11223 2345999999999999999987653334 34556666666664432
Q ss_pred --CCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 75 --PPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 75 --~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
..+|..+|.|++|...+.+|+..| ..+++++...+...
T Consensus 121 WsNG~Vgm~G~SY~g~tq~~~Aa~~p-PaLkai~p~~~~~D 160 (563)
T COG2936 121 WSNGNVGMLGLSYLGFTQLAAAALQP-PALKAIAPTEGLVD 160 (563)
T ss_pred ccCCeeeeecccHHHHHHHHHHhcCC-chheeecccccccc
Confidence 358999999999999999999988 77888888877643
No 172
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.23 E-value=2.6e-05 Score=61.24 Aligned_cols=106 Identities=19% Similarity=0.273 Sum_probs=68.3
Q ss_pred CCCeEEEEccCCCCcccHHH-------HHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHh-cCCCC
Q 023794 5 EGPVIFCLHGGGYSGLSFAL-------AAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMY-GEQPP 76 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~-------~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~-~~~~~ 76 (277)
+.|+||++||+|-.-..... +...|. ...++++|+.-...- ...+.+..+..++.+..++|- ..+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~----~~~~~yPtQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSD----EHGHKYPTQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccc----cCCCcCchHHHHHHHHHHHHHhccCCC
Confidence 46999999998754444322 223333 568888888643200 012334444555555555554 34678
Q ss_pred cEEEEEeChhHHHHHHHHHHhc----ccccceEEEEccCCCcc
Q 023794 77 SIVLVGHSMGGSVAVHVAAKKT----LRSLHGLVVVDVVEGTA 115 (277)
Q Consensus 77 ~~~lvG~S~Gg~ia~~~a~~~p----~~~v~~lvl~~~~~~~~ 115 (277)
.++|+|-|.||.+++.+.+.-. ....+++|+++|.....
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999999998876421 12368999999986544
No 173
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.22 E-value=6.1e-06 Score=69.14 Aligned_cols=107 Identities=21% Similarity=0.291 Sum_probs=63.3
Q ss_pred CCCCCeEEEEccCCC---CcccH--HHHHHhhhhcCeEEEEcCC----CCCCCCCCC-CCCCcHHHHHH---HHHHHHHH
Q 023794 3 GTEGPVIFCLHGGGY---SGLSF--ALAAGKIKEKARVVAMDLR----GHGKSSSEN-DIDLSIETMCN---DVLAVLKE 69 (277)
Q Consensus 3 g~~~p~vv~~HG~~~---~~~~~--~~~~~~l~~~~~vi~~d~~----G~G~S~~~~-~~~~~~~~~~~---d~~~~l~~ 69 (277)
+...|+||++||++. +...+ ..++.... ++.|+++++| |+..+.... .....+.++.. .+.+-++.
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 345799999999642 22222 22222111 3899999998 333332111 11223333332 23333333
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHH--hcccccceEEEEccCC
Q 023794 70 MYGEQPPSIVLVGHSMGGSVAVHVAAK--KTLRSLHGLVVVDVVE 112 (277)
Q Consensus 70 l~~~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~~v~~lvl~~~~~ 112 (277)
.+ .++++|+|+|+|.||..+..++.. .+ ..++++|++++..
T Consensus 171 fg-gd~~~v~~~G~SaG~~~~~~~~~~~~~~-~lf~~~i~~sg~~ 213 (493)
T cd00312 171 FG-GDPDSVTIFGESAGGASVSLLLLSPDSK-GLFHRAISQSGSA 213 (493)
T ss_pred hC-CCcceEEEEeecHHHHHhhhHhhCcchh-HHHHHHhhhcCCc
Confidence 33 357899999999999998888775 23 5688888888654
No 174
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.21 E-value=8.7e-06 Score=68.49 Aligned_cols=103 Identities=22% Similarity=0.228 Sum_probs=64.7
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhh-----------------hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIK-----------------EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVL 67 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~-----------------~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l 67 (277)
+|-||+|++|..|+...-+.++...+ ..|+.+++|+-+ +...=...++.++++-+.+.|
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE----e~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE----EFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc----hhhhhccHhHHHHHHHHHHHH
Confidence 56789999999988777666553322 135666676642 000001346666666655555
Q ss_pred HHH----hc--C-C---CCcEEEEEeChhHHHHHHHHHH---hcccccceEEEEccCC
Q 023794 68 KEM----YG--E-Q---PPSIVLVGHSMGGSVAVHVAAK---KTLRSLHGLVVVDVVE 112 (277)
Q Consensus 68 ~~l----~~--~-~---~~~~~lvG~S~Gg~ia~~~a~~---~p~~~v~~lvl~~~~~ 112 (277)
+.. ++ + . +..|+++||||||++|...+.. .+ +.|.-++-.+++.
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~-~sVntIITlssPH 220 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQ-GSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhcc-chhhhhhhhcCcc
Confidence 543 22 1 1 4569999999999999887754 23 5677777776653
No 175
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.09 E-value=2.5e-05 Score=61.03 Aligned_cols=104 Identities=21% Similarity=0.169 Sum_probs=78.7
Q ss_pred CeEEEEccCCCCcccHH---HHHHhhhh--cCeEEEEcCCCCCCCCCCCCC---------CCcHHHHHHHHHHHHHHHhc
Q 023794 7 PVIFCLHGGGYSGLSFA---LAAGKIKE--KARVVAMDLRGHGKSSSENDI---------DLSIETMCNDVLAVLKEMYG 72 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~---~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~---------~~~~~~~~~d~~~~l~~l~~ 72 (277)
-||+|.-|.-++.+.|. .++-.++. +.-++-.++|-||.|-+-... -.+.++-..|...+|..|+.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 56888889888777764 34444443 677888999999999653221 24677778888888888864
Q ss_pred C---CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 73 E---QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 73 ~---~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
. ...+|+.+|-|+|||+|..+=.+|| ..|.|...-+++
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYP-Hiv~GAlAaSAP 201 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYP-HIVLGALAASAP 201 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcCh-hhhhhhhhccCc
Confidence 3 3458999999999999999999999 888777665554
No 176
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.05 E-value=0.0014 Score=53.30 Aligned_cols=107 Identities=17% Similarity=0.244 Sum_probs=71.2
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhh-------------------hhcCeEEEEcCC-CCCCCCCCCCC--CCcHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKI-------------------KEKARVVAMDLR-GHGKSSSENDI--DLSIETMCND 62 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l-------------------~~~~~vi~~d~~-G~G~S~~~~~~--~~~~~~~~~d 62 (277)
..|.||++.|+++.+..-. +..++ .+-.+++-+|.| |.|.|...... ..+-+..++|
T Consensus 72 ~dPlvLWLnGGPGCSSl~G-~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d 150 (454)
T KOG1282|consen 72 TDPLVLWLNGGPGCSSLGG-LFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKD 150 (454)
T ss_pred CCCEEEEeCCCCCccchhh-hhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHH
Confidence 5789999999988776542 22211 123468999988 78888654322 2355667788
Q ss_pred HHHHHHHHhcC----CCCcEEEEEeChhHHHHHHHHHH----h-----cccccceEEEEccCC
Q 023794 63 VLAVLKEMYGE----QPPSIVLVGHSMGGSVAVHVAAK----K-----TLRSLHGLVVVDVVE 112 (277)
Q Consensus 63 ~~~~l~~l~~~----~~~~~~lvG~S~Gg~ia~~~a~~----~-----p~~~v~~lvl~~~~~ 112 (277)
...+|...... ..++++|.|-|++|...-.+|.+ + |.-.++|+++-++..
T Consensus 151 ~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 151 NYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred HHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 87777665432 23589999999999777666654 2 112478888877764
No 177
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.00 E-value=0.00028 Score=55.80 Aligned_cols=154 Identities=17% Similarity=0.138 Sum_probs=88.5
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcchHHhHHHHHHHH-hhccchhhHHHHHHHhh
Q 023794 66 VLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTAMASLIHMQKILS-TRMQHFSSIEKAIEWSV 144 (277)
Q Consensus 66 ~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 144 (277)
+++...+..++++++.|.|==|..++..|+.. .||.+++-+.-........+....+.+. .+... +.-..
T Consensus 162 ~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D--~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a-------~~dY~ 232 (367)
T PF10142_consen 162 FLKKKFGVNIEKFVVTGASKRGWTTWLTAAVD--PRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFA-------FQDYY 232 (367)
T ss_pred HHHhhcCCCccEEEEeCCchHhHHHHHhhccC--cceeEEeeEEEccCCcHHHHHHHHHHhCCCCccc-------hhhhh
Confidence 33333333678999999999999999999954 6899998776544333333332222222 11111 11111
Q ss_pred cCCccccchhhhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc-
Q 023794 145 KGGSLRNLDSARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ- 223 (277)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~- 223 (277)
..+....+ ....+...... .|......++++|.++|.|..|++..++....+.
T Consensus 233 ~~gi~~~l-----------------~tp~f~~L~~i---------vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d 286 (367)
T PF10142_consen 233 NEGITQQL-----------------DTPEFDKLMQI---------VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYD 286 (367)
T ss_pred HhCchhhc-----------------CCHHHHHHHHh---------cCHHHHHHhcCccEEEEecCCCceeccCchHHHHh
Confidence 11100000 00001110000 1111222566899999999999986666544433
Q ss_pred ---CCccEEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 224 ---GKFQMVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 224 ---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
....+..+|+++|..-. ..+.+.|..|+...
T Consensus 287 ~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 287 KLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred hCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHH
Confidence 44579999999998877 66777888888774
No 178
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.99 E-value=0.00047 Score=54.21 Aligned_cols=81 Identities=20% Similarity=0.241 Sum_probs=53.9
Q ss_pred CeEEEEcCC-CCCCCCCCCCCCC-cHHHHHHHHHHHHHHHhcC----CCCcEEEEEeChhHHHHHHHHHHh---------
Q 023794 33 ARVVAMDLR-GHGKSSSENDIDL-SIETMCNDVLAVLKEMYGE----QPPSIVLVGHSMGGSVAVHVAAKK--------- 97 (277)
Q Consensus 33 ~~vi~~d~~-G~G~S~~~~~~~~-~~~~~~~d~~~~l~~l~~~----~~~~~~lvG~S~Gg~ia~~~a~~~--------- 97 (277)
.+++-+|.| |.|.|....+..+ +-++.++|+..+|..+... ...+++|.|-|+||..+-.+|..-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 468999988 8898865432222 2234457777777765432 235899999999999877777642
Q ss_pred cccccceEEEEccCCC
Q 023794 98 TLRSLHGLVVVDVVEG 113 (277)
Q Consensus 98 p~~~v~~lvl~~~~~~ 113 (277)
+.-.++|+++-++...
T Consensus 82 ~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 82 PPINLQGYMLGNPVTY 97 (319)
T ss_pred CceeeeEEEeCCCCCC
Confidence 1024778888877543
No 179
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.91 E-value=0.00013 Score=56.75 Aligned_cols=61 Identities=18% Similarity=0.212 Sum_probs=46.2
Q ss_pred cCCC-ccEEEEEeCCCCCCchhhhhhhc----C-CccEEEeCCCCCcccccChH---HHHHHHHHHHHhc
Q 023794 197 LSCP-VPKLLLLAGTDRLDRPLTIGQMQ----G-KFQMVVVRHTGHAIQEDAPE---EFASLILNFIARN 257 (277)
Q Consensus 197 ~~i~-~P~l~i~g~~D~~~~~~~~~~~~----~-~~~~~~~~~~gH~~~~e~p~---~~~~~i~~fl~~~ 257 (277)
..+. +|+|+++|.+|..++......++ . ..+..++++++|......+. +..+.+.+|+.+.
T Consensus 228 ~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 228 EKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 4444 89999999999998877665544 2 35777888999998865443 6888888888764
No 180
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.88 E-value=6.9e-05 Score=60.33 Aligned_cols=106 Identities=23% Similarity=0.324 Sum_probs=64.9
Q ss_pred CCCeEEEEccCC---CCccc-HHHHHHhhhh-c-CeEEEEcCC----CCC-CCCCC--CC--CCCcHHHH---HHHHHHH
Q 023794 5 EGPVIFCLHGGG---YSGLS-FALAAGKIKE-K-ARVVAMDLR----GHG-KSSSE--ND--IDLSIETM---CNDVLAV 66 (277)
Q Consensus 5 ~~p~vv~~HG~~---~~~~~-~~~~~~~l~~-~-~~vi~~d~~----G~G-~S~~~--~~--~~~~~~~~---~~d~~~~ 66 (277)
+.|++|+|||++ ++... +..- ..|++ | +-|+++++| ||= .|+.. .. ....+.|+ .+.+.+-
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydg-s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDG-SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCcEEEEEeccccccCCCcccccCh-HHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 469999999953 22222 2222 23443 4 888888887 321 11111 00 02234443 3455666
Q ss_pred HHHHhcCCCCcEEEEEeChhHHHHHHHHHHhc--ccccceEEEEccCCC
Q 023794 67 LKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKT--LRSLHGLVVVDVVEG 113 (277)
Q Consensus 67 l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~~v~~lvl~~~~~~ 113 (277)
|.++++ +++.|.|+|+|-|++.++.+.+. | +..+.++|+.++...
T Consensus 172 Ie~FGG-Dp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGG-DPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCC-CccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 666655 57899999999999988877664 3 146888888887664
No 181
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.85 E-value=8.4e-05 Score=63.06 Aligned_cols=106 Identities=20% Similarity=0.288 Sum_probs=60.0
Q ss_pred CCCeEEEEccCCC---Cc--ccHHHHHHhhhhcCeEEEEcCC----CCCCCCCCC-C-CCCcHHHHHHH---HHHHHHHH
Q 023794 5 EGPVIFCLHGGGY---SG--LSFALAAGKIKEKARVVAMDLR----GHGKSSSEN-D-IDLSIETMCND---VLAVLKEM 70 (277)
Q Consensus 5 ~~p~vv~~HG~~~---~~--~~~~~~~~~l~~~~~vi~~d~~----G~G~S~~~~-~-~~~~~~~~~~d---~~~~l~~l 70 (277)
..|++|+|||++. +. ..+....-...++.-|+++++| |+-.+.... . ..+.+.|+... +.+-|...
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 3599999999642 22 2333322223458999999998 443222211 1 24444444433 33444444
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHHhc--ccccceEEEEccCC
Q 023794 71 YGEQPPSIVLVGHSMGGSVAVHVAAKKT--LRSLHGLVVVDVVE 112 (277)
Q Consensus 71 ~~~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~~v~~lvl~~~~~ 112 (277)
++ ++++|.|+|+|.||..+...+.. | ...++++|+.++..
T Consensus 204 GG-Dp~~VTl~G~SAGa~sv~~~l~s-p~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 204 GG-DPDNVTLFGQSAGAASVSLLLLS-PSSKGLFHRAILQSGSA 245 (535)
T ss_dssp TE-EEEEEEEEEETHHHHHHHHHHHG-GGGTTSBSEEEEES--T
T ss_pred cc-CCcceeeeeecccccccceeeec-ccccccccccccccccc
Confidence 33 57899999999999988877765 3 25799999999853
No 182
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.75 E-value=3.2e-05 Score=54.89 Aligned_cols=110 Identities=23% Similarity=0.310 Sum_probs=69.2
Q ss_pred CCCCCeEEEEccCCCCcccHHH---HHHhhhh-cCeEEEEcC--CCC---CCCCCCC---C-------------CCCcHH
Q 023794 3 GTEGPVIFCLHGGGYSGLSFAL---AAGKIKE-KARVVAMDL--RGH---GKSSSEN---D-------------IDLSIE 57 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~~---~~~~l~~-~~~vi~~d~--~G~---G~S~~~~---~-------------~~~~~~ 57 (277)
|..-|+|.++.|+.++...|-. +...-++ ++.|+.+|- ||. |.++.-. + ..|.+-
T Consensus 41 ~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMY 120 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMY 120 (283)
T ss_pred CCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHH
Confidence 3346899999999998887631 2222233 788999984 554 3332100 0 012222
Q ss_pred H-HHHHHHHHHHH-HhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 58 T-MCNDVLAVLKE-MYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 58 ~-~~~d~~~~l~~-l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
+ .++.+-+++.. ....++.++.+.||||||.=|+-.+.++| .+.+++-..+|...
T Consensus 121 dYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~-~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 121 DYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNP-SKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCc-ccccceeccccccC
Confidence 2 23344444442 11224557899999999999999999999 88888888777654
No 183
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.75 E-value=0.00056 Score=55.16 Aligned_cols=108 Identities=22% Similarity=0.241 Sum_probs=80.1
Q ss_pred CCCCeEEEEccCCCCcccHH-----HHHHhhhh-cCeEEEEcCCCCCCCCCCCCC------CCcHHHHHHHHHHHHHHHh
Q 023794 4 TEGPVIFCLHGGGYSGLSFA-----LAAGKIKE-KARVVAMDLRGHGKSSSENDI------DLSIETMCNDVLAVLKEMY 71 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~-----~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~------~~~~~~~~~d~~~~l~~l~ 71 (277)
+++|..|+|-|=+.-...|- .+...-++ |..|+..++|-||.|.+..+. ..+..+...|+.++|+++.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 57888888888443333341 12222233 789999999999998665432 2478888999999999885
Q ss_pred cC----CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 72 GE----QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 72 ~~----~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
.. +..+++.+|-|+-|.++..+=..+| +.+.+.|..+++.
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yP-el~~GsvASSapv 207 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYP-ELTVGSVASSAPV 207 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCc-hhheeecccccce
Confidence 33 2238999999999999999999999 9898888877763
No 184
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.68 E-value=0.00025 Score=45.55 Aligned_cols=60 Identities=13% Similarity=0.151 Sum_probs=49.0
Q ss_pred CccEEEEEeCCCCCCchhhhh---hhcCCccEEEeCCCCCcccccChHHHHHHHHHHHHhcCC
Q 023794 200 PVPKLLLLAGTDRLDRPLTIG---QMQGKFQMVVVRHTGHAIQEDAPEEFASLILNFIARNRI 259 (277)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~---~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 259 (277)
..|+|+|.++.|+..+.+... +.+++++++.+++.||......-.-+.+.+.+||..-..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~l 96 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGTL 96 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCCC
Confidence 589999999999998876554 445778999999999999874446788999999986544
No 185
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.67 E-value=0.0051 Score=55.20 Aligned_cols=99 Identities=20% Similarity=0.222 Sum_probs=72.1
Q ss_pred CCCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Q 023794 4 TEGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGH 83 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~ 83 (277)
...|++.|+|..-+....++.++..|. .|.||.-.-..-...+++..+.-...-++.+...+ +..++|+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~G--PYrl~GY 2189 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEG--PYRLAGY 2189 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCC--Ceeeecc
Confidence 367899999999888888888777764 35555432222224689998888888888775443 6899999
Q ss_pred ChhHHHHHHHHHHhcc-cccceEEEEccCCC
Q 023794 84 SMGGSVAVHVAAKKTL-RSLHGLVVVDVVEG 113 (277)
Q Consensus 84 S~Gg~ia~~~a~~~p~-~~v~~lvl~~~~~~ 113 (277)
|+|+.++..+|..-.+ +....+|++++.+.
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999999876321 34666999987653
No 186
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.65 E-value=0.00086 Score=47.87 Aligned_cols=103 Identities=15% Similarity=0.207 Sum_probs=61.8
Q ss_pred CCeEEEEccCCC-CcccHHH----------------HHHhhhhcCeEEEEcCCC---CCCCCCCC-CCCCcHHHHHHH-H
Q 023794 6 GPVIFCLHGGGY-SGLSFAL----------------AAGKIKEKARVVAMDLRG---HGKSSSEN-DIDLSIETMCND-V 63 (277)
Q Consensus 6 ~p~vv~~HG~~~-~~~~~~~----------------~~~~l~~~~~vi~~d~~G---~G~S~~~~-~~~~~~~~~~~d-~ 63 (277)
...+|+|||.|- -...|.. +-+..+.||.|++.+.-- +-.+...+ ....+..+.+.- .
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 457999999764 3344532 122334589999987531 21221111 111233333332 2
Q ss_pred HHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcc-cccceEEEEccC
Q 023794 64 LAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTL-RSLHGLVVVDVV 111 (277)
Q Consensus 64 ~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~-~~v~~lvl~~~~ 111 (277)
..++... ..+.+.++.||+||...+.+..++|. ++|.++.+-+++
T Consensus 181 ~~~v~pa---~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 181 KNIVLPA---KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHhccc---CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 3333333 56789999999999999999999873 467777777665
No 187
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.64 E-value=0.00022 Score=49.63 Aligned_cols=57 Identities=23% Similarity=0.260 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhcC-CCCcEEEEEeChhHHHHHHHHHHhcc---cccceEEEEccCC
Q 023794 56 IETMCNDVLAVLKEMYGE-QPPSIVLVGHSMGGSVAVHVAAKKTL---RSLHGLVVVDVVE 112 (277)
Q Consensus 56 ~~~~~~d~~~~l~~l~~~-~~~~~~lvG~S~Gg~ia~~~a~~~p~---~~v~~lvl~~~~~ 112 (277)
...+...+...++..... ...+++++|||+||.+|..++..... ..+..++..+++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 344555666666554321 34589999999999999999988752 2456666666543
No 188
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.56 E-value=0.013 Score=43.40 Aligned_cols=79 Identities=13% Similarity=0.246 Sum_probs=51.7
Q ss_pred cHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHH----HHHHHHHhcC---C--CCcEEEEEeChhHHHH
Q 023794 21 SFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDV----LAVLKEMYGE---Q--PPSIVLVGHSMGGSVA 90 (277)
Q Consensus 21 ~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~----~~~l~~l~~~---~--~~~~~lvG~S~Gg~ia 90 (277)
.|+.+.+.|.+ ||.|++.-+. ..++-...|..+ ...++.+... . .-+++-+|||+||-+-
T Consensus 35 tYr~lLe~La~~Gy~ViAtPy~----------~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklh 104 (250)
T PF07082_consen 35 TYRYLLERLADRGYAVIATPYV----------VTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLH 104 (250)
T ss_pred HHHHHHHHHHhCCcEEEEEecC----------CCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHH
Confidence 37888998877 9999998774 123333333332 2333333321 1 1267889999999999
Q ss_pred HHHHHHhcccccceEEEEcc
Q 023794 91 VHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 91 ~~~a~~~p~~~v~~lvl~~~ 110 (277)
+.+...++ ..-++-++++-
T Consensus 105 lLi~s~~~-~~r~gniliSF 123 (250)
T PF07082_consen 105 LLIGSLFD-VERAGNILISF 123 (250)
T ss_pred HHHhhhcc-CcccceEEEec
Confidence 98888776 44577787764
No 189
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.55 E-value=0.006 Score=46.01 Aligned_cols=101 Identities=6% Similarity=0.008 Sum_probs=68.1
Q ss_pred CeEEEEccCCC-CcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 7 PVIFCLHGGGY-SGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 7 p~vv~~HG~~~-~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
|.||++-...+ .....+..++.|-....|+.-|+-.--.-.... ..++++++++-+.+.+..+ +++ +++++.+.
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~-G~FdldDYIdyvie~~~~~---Gp~-~hv~aVCQ 178 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEA-GHFDLDDYIDYVIEMINFL---GPD-AHVMAVCQ 178 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeeccc-CCccHHHHHHHHHHHHHHh---CCC-CcEEEEec
Confidence 45555555444 444566777777777889998986433222222 3689999999999999999 543 68888776
Q ss_pred hHH-----HHHHHHHHhcccccceEEEEccCCC
Q 023794 86 GGS-----VAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 86 Gg~-----ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
-+. +++..+...| ..-+++++++++-.
T Consensus 179 P~vPvLAAisLM~~~~~p-~~PssMtlmGgPID 210 (415)
T COG4553 179 PTVPVLAAISLMEEDGDP-NVPSSMTLMGGPID 210 (415)
T ss_pred CCchHHHHHHHHHhcCCC-CCCceeeeecCccc
Confidence 544 3333333456 77899999988644
No 190
>COG0627 Predicted esterase [General function prediction only]
Probab=97.52 E-value=0.00067 Score=52.77 Aligned_cols=112 Identities=21% Similarity=0.231 Sum_probs=67.2
Q ss_pred CCCCCeEEEEccCCCCcccHH---HHHHhhhh-cCeEEEEcC--------------CCCCCCCCC------CCC-CCcHH
Q 023794 3 GTEGPVIFCLHGGGYSGLSFA---LAAGKIKE-KARVVAMDL--------------RGHGKSSSE------NDI-DLSIE 57 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~---~~~~~l~~-~~~vi~~d~--------------~G~G~S~~~------~~~-~~~~~ 57 (277)
+.+-|+++++||..++...|. .+-....+ +..++++|- .|-+.|--. ... .+.++
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 445689999999888864442 22222222 555555422 233322110 001 14444
Q ss_pred HH-HHHHHHHHHHHhcCCC--CcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcc
Q 023794 58 TM-CNDVLAVLKEMYGEQP--PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTA 115 (277)
Q Consensus 58 ~~-~~d~~~~l~~l~~~~~--~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~ 115 (277)
++ .+++-..++......- .+..++||||||.=|+.+|.++| +++..+...++.....
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~p-d~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHP-DRFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCc-chhceecccccccccc
Confidence 44 3445544444322111 25789999999999999999999 9999999988875544
No 191
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.50 E-value=0.00024 Score=55.97 Aligned_cols=106 Identities=18% Similarity=0.147 Sum_probs=84.0
Q ss_pred CCCCCeEEEEccCCCCcccHH-HHHHhhhhcCeEEEEcCCCCCCCCCCCCC--CCcHHHHHHHHHHHHHHHhcCCCCcEE
Q 023794 3 GTEGPVIFCLHGGGYSGLSFA-LAAGKIKEKARVVAMDLRGHGKSSSENDI--DLSIETMCNDVLAVLKEMYGEQPPSIV 79 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~~-~~~~~l~~~~~vi~~d~~G~G~S~~~~~~--~~~~~~~~~d~~~~l~~l~~~~~~~~~ 79 (277)
+.+.|+|+..-|.+.+....+ .....| +-+-+.+.+|-+|.|.+.+.. ..++++-+.|.+++++.++..-..+.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 457899999999877644332 233333 456789999999999876632 468999999999999999877777899
Q ss_pred EEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 80 LVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
--|-|-||+.++.+=.-|| +.|.+.|....+
T Consensus 138 STG~SKGGmTa~y~rrFyP-~DVD~tVaYVAP 168 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYP-DDVDGTVAYVAP 168 (448)
T ss_pred ecCcCCCceeEEEEeeeCC-CCCCeeeeeecc
Confidence 9999999999999988899 888888776554
No 192
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.46 E-value=0.00038 Score=47.61 Aligned_cols=23 Identities=48% Similarity=0.654 Sum_probs=20.3
Q ss_pred CCcEEEEEeChhHHHHHHHHHHh
Q 023794 75 PPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
..++++.|||+||.+|..++...
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHhh
Confidence 35899999999999999998874
No 193
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.43 E-value=0.00098 Score=45.26 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=53.8
Q ss_pred CeEEEEccCCCCcccHHHHHHhhhhcCe-EEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 7 PVIFCLHGGGYSGLSFALAAGKIKEKAR-VVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~~~~~~l~~~~~-vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
..||++-||+..+..+.++. +.+++. ++++|+..... ++++.. .+.+.||++||
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~l-------dfDfsA----------------y~hirlvAwSM 66 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNL-------DFDFSA----------------YRHIRLVAWSM 66 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCc-------ccchhh----------------hhhhhhhhhhH
Confidence 37888889998888777665 445554 57889873211 122211 12357999999
Q ss_pred hHHHHHHHHHHhcccccceEEEEccCC
Q 023794 86 GGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 86 Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
|-.+|-++....+ +++.+.+++..
T Consensus 67 GVwvAeR~lqg~~---lksatAiNGTg 90 (214)
T COG2830 67 GVWVAERVLQGIR---LKSATAINGTG 90 (214)
T ss_pred HHHHHHHHHhhcc---ccceeeecCCC
Confidence 9999999998865 77777777654
No 194
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.40 E-value=0.00082 Score=55.85 Aligned_cols=88 Identities=15% Similarity=0.112 Sum_probs=57.3
Q ss_pred ccHHHHHHhhhh-cCe-----EEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEEEEeChhHHHHHH
Q 023794 20 LSFALAAGKIKE-KAR-----VVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVLVGHSMGGSVAVH 92 (277)
Q Consensus 20 ~~~~~~~~~l~~-~~~-----vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~lvG~S~Gg~ia~~ 92 (277)
..|..+++.|.+ ||. ...||+| .|. .....-+++-..+..+|+..... +.++|+|+||||||.+++.
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWR---ls~---~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ly 229 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWR---LSF---QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLH 229 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeecccccc---cCc---cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHH
Confidence 457899999987 765 3345555 111 00112355556677777765432 3478999999999999999
Q ss_pred HHHHh--------------cccccceEEEEccCCC
Q 023794 93 VAAKK--------------TLRSLHGLVVVDVVEG 113 (277)
Q Consensus 93 ~a~~~--------------p~~~v~~lvl~~~~~~ 113 (277)
+...- -+..|++.|.++++..
T Consensus 230 FL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 230 FMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred HHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 87631 1135889999988643
No 195
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.33 E-value=0.0015 Score=48.94 Aligned_cols=57 Identities=23% Similarity=0.297 Sum_probs=35.0
Q ss_pred cHHHHHHHHHHHHHHHhcC-CCCcEEEEEeChhHHHHHHHHHHhc----ccccceEEEEccC
Q 023794 55 SIETMCNDVLAVLKEMYGE-QPPSIVLVGHSMGGSVAVHVAAKKT----LRSLHGLVVVDVV 111 (277)
Q Consensus 55 ~~~~~~~d~~~~l~~l~~~-~~~~~~lvG~S~Gg~ia~~~a~~~p----~~~v~~lvl~~~~ 111 (277)
....+..++...+..+... ...++++.|||+||.+|..++.... ...+..+++-+|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 3444444555555544322 2357999999999999999888642 1345555554443
No 196
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.26 E-value=0.0038 Score=49.67 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=30.2
Q ss_pred cEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 77 SIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 77 ~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
|++++|+|.||.+|...|.--| ..+.+++=-++..
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP-~~~~~~iDns~~~ 219 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAP-WLFDGVIDNSSYA 219 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCc-cceeEEEecCccc
Confidence 8999999999999999999999 8888887655543
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.26 E-value=0.00065 Score=50.64 Aligned_cols=38 Identities=13% Similarity=0.248 Sum_probs=34.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
+.++-.++|||+||.+++.....+| +.+...++++|..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p-~~F~~y~~~SPSl 172 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYP-DCFGRYGLISPSL 172 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCc-chhceeeeecchh
Confidence 4456899999999999999999999 9999999999854
No 198
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.20 E-value=0.0015 Score=48.27 Aligned_cols=48 Identities=29% Similarity=0.335 Sum_probs=34.2
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhc---ccccceEEEEccCC
Q 023794 65 AVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKT---LRSLHGLVVVDVVE 112 (277)
Q Consensus 65 ~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p---~~~v~~lvl~~~~~ 112 (277)
+.++.+.....+++++.|||.||.+|..+|...+ .++|..+...+++.
T Consensus 73 ~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3344433223446999999999999999998732 15788988888754
No 199
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.19 E-value=0.0032 Score=49.66 Aligned_cols=85 Identities=18% Similarity=0.119 Sum_probs=61.0
Q ss_pred eEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEEEEeCh
Q 023794 8 VIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVLVGHSM 85 (277)
Q Consensus 8 ~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~lvG~S~ 85 (277)
.-||+.|=|+-...=+.+...|++ |+.|+-+|-.-|=+|. .+.++.+.|+..+++....+ +.+++.|+|+|+
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySf 335 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRFYARRWGAKRVLLIGYSF 335 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHHHHHHhhCcceEEEEeecc
Confidence 345555544444444567788877 9999999977665554 36788999999999887653 567999999999
Q ss_pred hHHHHHHHHHHhc
Q 023794 86 GGSVAVHVAAKKT 98 (277)
Q Consensus 86 Gg~ia~~~a~~~p 98 (277)
|+=+.-..-.+-|
T Consensus 336 GADvlP~~~n~L~ 348 (456)
T COG3946 336 GADVLPFAYNRLP 348 (456)
T ss_pred cchhhHHHHHhCC
Confidence 9987655544444
No 200
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.12 E-value=0.012 Score=43.88 Aligned_cols=55 Identities=13% Similarity=0.092 Sum_probs=42.8
Q ss_pred EEEEEeCCCCCCc---hhhhhhhcCCccEEEeCCCCCcc-cccChHHHHHHHHHHHHhcC
Q 023794 203 KLLLLAGTDRLDR---PLTIGQMQGKFQMVVVRHTGHAI-QEDAPEEFASLILNFIARNR 258 (277)
Q Consensus 203 ~l~i~g~~D~~~~---~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~~~ 258 (277)
+.++.+.+|..++ ...++++.|++++..++ +||.. .+-+-+.+.+.|.+-|++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 4677778887655 44677888999999998 69965 45577999999999998765
No 201
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.07 E-value=0.0015 Score=52.59 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=56.9
Q ss_pred ccHHHHHHhhhh-cCe------EEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEEEEeChhHHHHH
Q 023794 20 LSFALAAGKIKE-KAR------VVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVLVGHSMGGSVAV 91 (277)
Q Consensus 20 ~~~~~~~~~l~~-~~~------vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~lvG~S~Gg~ia~ 91 (277)
..|..+++.|.. ||. -..||+|= |... ..-.+++...+...++..... +-+|++|++||||+.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~---~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHN---SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCC---hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 367888888876 665 34577772 1111 123455566666666654332 447899999999999999
Q ss_pred HHHHHhcc-------cccceEEEEccCC
Q 023794 92 HVAAKKTL-------RSLHGLVVVDVVE 112 (277)
Q Consensus 92 ~~a~~~p~-------~~v~~lvl~~~~~ 112 (277)
.+...++. ..|++++-++++.
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCchh
Confidence 99988872 1366666666543
No 202
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.06 E-value=0.0028 Score=44.81 Aligned_cols=57 Identities=18% Similarity=0.222 Sum_probs=45.3
Q ss_pred cHHHHHHHHHHHHHHHhcCC--CCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 55 SIETMCNDVLAVLKEMYGEQ--PPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 55 ~~~~~~~d~~~~l~~l~~~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
.-+.-+.+|..+++.|.... ..++.++|||+|+.++-..+...+ ..+..++++.++.
T Consensus 86 ~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~-~~vddvv~~GSPG 144 (177)
T PF06259_consen 86 YARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGG-LRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCC-CCcccEEEECCCC
Confidence 45666778888888886432 347899999999999999988856 7899999988753
No 203
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.05 E-value=0.0019 Score=49.04 Aligned_cols=110 Identities=17% Similarity=0.165 Sum_probs=63.9
Q ss_pred CCCCCeEEEEcc--CCCCcccHHHHHHhhhh----cCeEEEEcCCCCC-CCCCCCCCCCcHHHHHHHHHHHHHHHhcC--
Q 023794 3 GTEGPVIFCLHG--GGYSGLSFALAAGKIKE----KARVVAMDLRGHG-KSSSENDIDLSIETMCNDVLAVLKEMYGE-- 73 (277)
Q Consensus 3 g~~~p~vv~~HG--~~~~~~~~~~~~~~l~~----~~~vi~~d~~G~G-~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-- 73 (277)
+..-|++++.|| +..+...+..+-..+.+ ..-++.+|.---- +.............+++++.=.++.-...
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~ 174 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSA 174 (299)
T ss_pred cccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccc
Confidence 345689999998 34455555555555544 2445555553100 00000001123333444444444433211
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
....-+|+|.|+||.+++..+..+| +.+-.++..++...
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~P-e~FG~V~s~Sps~~ 213 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHP-ERFGHVLSQSGSFW 213 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCc-hhhceeeccCCccc
Confidence 1234589999999999999999999 99999998887543
No 204
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.02 E-value=0.0086 Score=42.79 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=56.6
Q ss_pred eEEEEccCCCCccc---HHHHHHhhhh-----cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCC-CcE
Q 023794 8 VIFCLHGGGYSGLS---FALAAGKIKE-----KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQP-PSI 78 (277)
Q Consensus 8 ~vv~~HG~~~~~~~---~~~~~~~l~~-----~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~ 78 (277)
.||+..|.+..... -..+...+.+ ...+..+++|-..... ....+...-+.++...++......+ .++
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP~~ki 83 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCPNTKI 83 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHSTTSEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 46777776544322 1233444432 2445556676322111 1223556666667666665543333 489
Q ss_pred EEEEeChhHHHHHHHHHH------hcccccceEEEEccCC
Q 023794 79 VLVGHSMGGSVAVHVAAK------KTLRSLHGLVVVDVVE 112 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~------~p~~~v~~lvl~~~~~ 112 (277)
+|+|+|.|+.++..++.. .. ++|.++++++-+.
T Consensus 84 vl~GYSQGA~V~~~~~~~~~l~~~~~-~~I~avvlfGdP~ 122 (179)
T PF01083_consen 84 VLAGYSQGAMVVGDALSGDGLPPDVA-DRIAAVVLFGDPR 122 (179)
T ss_dssp EEEEETHHHHHHHHHHHHTTSSHHHH-HHEEEEEEES-TT
T ss_pred EEEecccccHHHHHHHHhccCChhhh-hhEEEEEEecCCc
Confidence 999999999999999877 23 6799999987543
No 205
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.02 E-value=0.0047 Score=50.30 Aligned_cols=107 Identities=27% Similarity=0.320 Sum_probs=70.3
Q ss_pred CCCeEEEEccCCCCcccHHHHHHh----h---------------hhcCeEEEEc-CCCCCCCCC-CCCCCCcHHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGK----I---------------KEKARVVAMD-LRGHGKSSS-ENDIDLSIETMCNDV 63 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~----l---------------~~~~~vi~~d-~~G~G~S~~-~~~~~~~~~~~~~d~ 63 (277)
+.|.++++.|+++++..|..+.+. + .+.-.++-+| .-|.|.|.. .....-++....+|+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhH
Confidence 478999999999999988766431 1 1124688999 558898875 222244556666666
Q ss_pred HHHHHHHhc------CCCCcEEEEEeChhHHHHHHHHHHhccc--ccceEEEEccC
Q 023794 64 LAVLKEMYG------EQPPSIVLVGHSMGGSVAVHVAAKKTLR--SLHGLVVVDVV 111 (277)
Q Consensus 64 ~~~l~~l~~------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~--~v~~lvl~~~~ 111 (277)
..+++.+.. +...+.+|+|-|+||.-+-.+|..--++ ..++++++++.
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 655554321 1224789999999999999998764311 24555555543
No 206
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.99 E-value=0.058 Score=42.58 Aligned_cols=238 Identities=12% Similarity=0.023 Sum_probs=118.0
Q ss_pred CCCeEEEEccCCCCcccHH-HHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFA-LAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~-~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
...+||++=||.+..+-|- .......+ |+.++.+-.|-+-..-.......+......-+..++.... .++.++++--
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~-~~~~pi~fh~ 115 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYN-SDPCPIIFHV 115 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhcc-CCcCceEEEE
Confidence 3436777777776666543 34444444 8888888887653322222223455555566666666654 3456788889
Q ss_pred eChhHHHHHHHH---HH-h-c--ccccceEEEEccCCCcchHHhHHHHHHHHhhccchhh-HHHHHHHhhcCCccccchh
Q 023794 83 HSMGGSVAVHVA---AK-K-T--LRSLHGLVVVDVVEGTAMASLIHMQKILSTRMQHFSS-IEKAIEWSVKGGSLRNLDS 154 (277)
Q Consensus 83 ~S~Gg~ia~~~a---~~-~-p--~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 154 (277)
.|+||...+... .. + | .+.+.+++..+.+............ .+.. ......+....... ...
T Consensus 116 FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~--------~~~~~~~~~~~~~~~~~~~--i~~ 185 (350)
T KOG2521|consen 116 FSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAV--------SFSSPPDDYVARWARLNYH--ITL 185 (350)
T ss_pred ecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhccee--------ccccCchhhHHHHHhcCeE--EEE
Confidence 999998765443 11 2 2 1345667766654332211100000 0000 00000001110000 000
Q ss_pred hhhcCccccccCCCcchhHHHHHhHHHHHHHHHHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhc-------CCcc
Q 023794 155 ARLSIPSTLKYDDSKKCYVYRARLEETEQYWRAWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQ-------GKFQ 227 (277)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~-------~~~~ 227 (277)
..+.......+ ............... .+...+...-.....+.+.+.+..|.+++.+..+++. -+++
T Consensus 186 ~~~~~~~~~~~---~~~~~~~~~~~~r~~---~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~ 259 (350)
T KOG2521|consen 186 LTMAGNEGGAY---LLGPLAEKISMSRKY---HFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVK 259 (350)
T ss_pred EEeeecccchh---hhhhhhhccccccch---HHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEE
Confidence 00000000000 000000000000000 0011122222344677889999999999988777763 2446
Q ss_pred EEEeCCCCCccccc-ChHHHHHHHHHHHHhcCC
Q 023794 228 MVVVRHTGHAIQED-APEEFASLILNFIARNRI 259 (277)
Q Consensus 228 ~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~~~~ 259 (277)
.+-+.++-|..+.. .|..+.+...+|+++...
T Consensus 260 s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 260 SVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred EeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 66677888888765 789999999999998765
No 207
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.87 E-value=0.052 Score=45.93 Aligned_cols=108 Identities=20% Similarity=0.262 Sum_probs=69.4
Q ss_pred CCCCeEEEEccC-CCCcc-cHHH-HHHhhhhcCeEEEEcCCCCCCCCCC-------CCCCCcHHHHHHHHHHHHHHHhcC
Q 023794 4 TEGPVIFCLHGG-GYSGL-SFAL-AAGKIKEKARVVAMDLRGHGKSSSE-------NDIDLSIETMCNDVLAVLKEMYGE 73 (277)
Q Consensus 4 ~~~p~vv~~HG~-~~~~~-~~~~-~~~~l~~~~~vi~~d~~G~G~S~~~-------~~~~~~~~~~~~d~~~~l~~l~~~ 73 (277)
+.+|.+|..=|. |.+.. .|.. ....|..|+---..--||=|.-... .....++.++++....+++.=..
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~- 524 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT- 524 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC-
Confidence 367777777773 22222 2332 2333445664444456775543221 11245787777766666654322
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCC
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEG 113 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~ 113 (277)
..+.++++|-|.||++....+.+.| +.++++|+-.|...
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P-~lf~~iiA~VPFVD 563 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAP-DLFAGIIAQVPFVD 563 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhCh-hhhhheeecCCccc
Confidence 3468999999999999999999999 99999999877543
No 208
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.71 E-value=0.012 Score=49.41 Aligned_cols=105 Identities=14% Similarity=0.155 Sum_probs=65.5
Q ss_pred CCCeEEEEccCC-CCcc-cHHHHHHhh-hhcCeEEEEcCCCCCCCC---CCCC----CCCcHHHHHHHHHHHHHHHhcCC
Q 023794 5 EGPVIFCLHGGG-YSGL-SFALAAGKI-KEKARVVAMDLRGHGKSS---SEND----IDLSIETMCNDVLAVLKEMYGEQ 74 (277)
Q Consensus 5 ~~p~vv~~HG~~-~~~~-~~~~~~~~l-~~~~~vi~~d~~G~G~S~---~~~~----~~~~~~~~~~d~~~~l~~l~~~~ 74 (277)
++|.+|..+|.- .+-. .|..-.-.| ..|+-....|.||=|.-. ...+ ...+++++......+++.= -..
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g-yt~ 547 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENG-YTQ 547 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcC-CCC
Confidence 667666666632 2211 243222223 346666667999865432 2222 1346666665555555432 113
Q ss_pred CCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 75 PPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
+++..+.|.|-||.++..++..+| +.+.++|+-.|.
T Consensus 548 ~~kL~i~G~SaGGlLvga~iN~rP-dLF~avia~Vpf 583 (712)
T KOG2237|consen 548 PSKLAIEGGSAGGLLVGACINQRP-DLFGAVIAKVPF 583 (712)
T ss_pred ccceeEecccCccchhHHHhccCc-hHhhhhhhcCcc
Confidence 568999999999999999999999 999988886654
No 209
>PLN02571 triacylglycerol lipase
Probab=96.63 E-value=0.004 Score=49.93 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHH
Q 023794 57 ETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 57 ~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
+++..++..+++..... ..++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHH
Confidence 34555566666554221 1268999999999999999876
No 210
>PLN02454 triacylglycerol lipase
Probab=96.53 E-value=0.0057 Score=49.04 Aligned_cols=39 Identities=38% Similarity=0.509 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhcCC-CC--cEEEEEeChhHHHHHHHHHH
Q 023794 58 TMCNDVLAVLKEMYGEQ-PP--SIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 58 ~~~~d~~~~l~~l~~~~-~~--~~~lvG~S~Gg~ia~~~a~~ 96 (277)
...+++...++.+.... .. ++++.|||+||.+|...|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 34445555555543221 12 49999999999999999865
No 211
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.53 E-value=0.016 Score=49.54 Aligned_cols=103 Identities=25% Similarity=0.402 Sum_probs=59.0
Q ss_pred CCeEEEEccCCC---CcccHHH--HHHhhh-hcCeEEEEcCC----CC---CCCCCCCCCCCcHHHHHHH---HHHHHHH
Q 023794 6 GPVIFCLHGGGY---SGLSFAL--AAGKIK-EKARVVAMDLR----GH---GKSSSENDIDLSIETMCND---VLAVLKE 69 (277)
Q Consensus 6 ~p~vv~~HG~~~---~~~~~~~--~~~~l~-~~~~vi~~d~~----G~---G~S~~~~~~~~~~~~~~~d---~~~~l~~ 69 (277)
-|++|++||++- +...+.. ....+. ++.-|+.+.+| |+ |.+.. + ..+.+.+++.. +.+-|..
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~-~-gN~gl~Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA-P-GNLGLFDQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCC-C-CcccHHHHHHHHHHHHHHHHh
Confidence 589999999753 2222311 111222 24666777766 33 32222 2 24555555544 3444445
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHH-hcccccceEEEEccC
Q 023794 70 MYGEQPPSIVLVGHSMGGSVAVHVAAK-KTLRSLHGLVVVDVV 111 (277)
Q Consensus 70 l~~~~~~~~~lvG~S~Gg~ia~~~a~~-~p~~~v~~lvl~~~~ 111 (277)
.++ ++++|.|+|||.||..+..+... +-...+..+|.+++.
T Consensus 190 FGG-dp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 190 FGG-DPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred cCC-CCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 443 67899999999999998776653 111456666666654
No 212
>PLN02310 triacylglycerol lipase
Probab=96.41 E-value=0.0078 Score=48.23 Aligned_cols=39 Identities=26% Similarity=0.427 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHhcCC-CCcEEEEEeChhHHHHHHHHHH
Q 023794 58 TMCNDVLAVLKEMYGEQ-PPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 58 ~~~~d~~~~l~~l~~~~-~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
+..+.+..+++.....+ ..++++.|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455566665543212 2379999999999999998865
No 213
>PLN02162 triacylglycerol lipase
Probab=96.36 E-value=0.0077 Score=48.86 Aligned_cols=21 Identities=38% Similarity=0.642 Sum_probs=18.5
Q ss_pred CCcEEEEEeChhHHHHHHHHH
Q 023794 75 PPSIVLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~ 95 (277)
..++++.|||+||.+|..+|.
T Consensus 277 ~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CceEEEEecChHHHHHHHHHH
Confidence 357999999999999999865
No 214
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.36 E-value=0.012 Score=42.67 Aligned_cols=67 Identities=16% Similarity=0.158 Sum_probs=40.6
Q ss_pred hhhcCeEEEEcCCCCCCCCCC-----CC---CCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 29 IKEKARVVAMDLRGHGKSSSE-----ND---IDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 29 l~~~~~vi~~d~~G~G~S~~~-----~~---~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
+....+|+++=+|=....... .. ......+..+.+..+|++.. +-++++|+|||.|+++..++..++
T Consensus 42 F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 42 FNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHH
Confidence 444577888877733211111 10 12334444445555555542 225899999999999999999875
No 215
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.27 E-value=0.032 Score=44.01 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=33.1
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhcc----cccceEEEEccCCCcchH
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTL----RSLHGLVVVDVVEGTAMA 117 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~----~~v~~lvl~~~~~~~~~~ 117 (277)
+.+|+.|+|||+|+.+.+....+-.+ ..|+.+++++.+......
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~ 265 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPE 265 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHH
Confidence 55689999999999998887766431 348999999876554433
No 216
>PLN00413 triacylglycerol lipase
Probab=96.24 E-value=0.011 Score=48.14 Aligned_cols=35 Identities=26% Similarity=0.543 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 023794 58 TMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 58 ~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~ 95 (277)
+..+.+.++++.. ...++++.|||+||++|..+|.
T Consensus 269 ~i~~~Lk~ll~~~---p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN---PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC---CCCeEEEEecCHHHHHHHHHHH
Confidence 3444555555443 3457999999999999999885
No 217
>PLN02408 phospholipase A1
Probab=96.23 E-value=0.01 Score=46.97 Aligned_cols=36 Identities=25% Similarity=0.462 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 61 NDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 61 ~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
+.+..+++.... ...++++.|||+||.+|...|...
T Consensus 186 ~eI~~ll~~y~~-~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 186 EEIARLLQSYGD-EPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHhcCC-CCceEEEeccchHHHHHHHHHHHH
Confidence 444444444321 123699999999999999998764
No 218
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.17 E-value=0.012 Score=48.54 Aligned_cols=39 Identities=23% Similarity=0.388 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHhcCC-CCcEEEEEeChhHHHHHHHHHH
Q 023794 58 TMCNDVLAVLKEMYGEQ-PPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 58 ~~~~d~~~~l~~l~~~~-~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
+..+++..+++.....+ ..++++.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34456666666553211 2369999999999999998865
No 219
>PLN02324 triacylglycerol lipase
Probab=96.12 E-value=0.011 Score=47.35 Aligned_cols=36 Identities=31% Similarity=0.399 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHH
Q 023794 60 CNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 60 ~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
.+++..+++..... ..++++.|||+||.+|...|..
T Consensus 200 l~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHH
Confidence 33455555543211 1369999999999999999865
No 220
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.04 E-value=0.028 Score=46.94 Aligned_cols=105 Identities=18% Similarity=0.258 Sum_probs=66.2
Q ss_pred CCCeEEEEccCCCCc--ccHHHH-HHhhhhcCeEEEEcCCCCCCCCCC---CCCCCcHHHHHHHHHHHHHHHhcCC---C
Q 023794 5 EGPVIFCLHGGGYSG--LSFALA-AGKIKEKARVVAMDLRGHGKSSSE---NDIDLSIETMCNDVLAVLKEMYGEQ---P 75 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~--~~~~~~-~~~l~~~~~vi~~d~~G~G~S~~~---~~~~~~~~~~~~d~~~~l~~l~~~~---~ 75 (277)
.+|++|+-=|+..-+ -.|... ...|.+|...+..+.||=|.=.+. ......-+...+|..++.+.|..++ +
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitsp 499 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSP 499 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCH
Confidence 357666555532211 124333 444667888888899997654321 1111223334556666666665444 4
Q ss_pred CcEEEEEeChhHHHHHHHHHHhcccccceEEEEcc
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~ 110 (277)
+++.+.|-|=||.+.-....++| +.+.++|+--|
T Consensus 500 e~lgi~GgSNGGLLvg~alTQrP-elfgA~v~evP 533 (648)
T COG1505 500 EKLGIQGGSNGGLLVGAALTQRP-ELFGAAVCEVP 533 (648)
T ss_pred HHhhhccCCCCceEEEeeeccCh-hhhCceeeccc
Confidence 68899999999999888888899 88888877554
No 221
>PLN02934 triacylglycerol lipase
Probab=96.02 E-value=0.014 Score=47.93 Aligned_cols=35 Identities=29% Similarity=0.541 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHH
Q 023794 59 MCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 59 ~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
....+.++++.. ...++++.|||+||.+|..+|..
T Consensus 307 v~~~lk~ll~~~---p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 307 VRSKLKSLLKEH---KNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHC---CCCeEEEeccccHHHHHHHHHHH
Confidence 344444444433 33589999999999999999853
No 222
>PLN02802 triacylglycerol lipase
Probab=95.88 E-value=0.016 Score=47.60 Aligned_cols=37 Identities=32% Similarity=0.526 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 60 CNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 60 ~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
.+++..+++..... ..++++.|||+||.+|...|...
T Consensus 315 l~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 315 VGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHH
Confidence 33444444433211 13689999999999999988764
No 223
>PLN02761 lipase class 3 family protein
Probab=95.73 E-value=0.023 Score=46.87 Aligned_cols=21 Identities=43% Similarity=0.572 Sum_probs=18.6
Q ss_pred CcEEEEEeChhHHHHHHHHHH
Q 023794 76 PSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
-++++.|||+||.+|...|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 379999999999999998864
No 224
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.71 E-value=0.011 Score=46.95 Aligned_cols=86 Identities=21% Similarity=0.217 Sum_probs=47.2
Q ss_pred CCCeEEEEccCCC-CcccHHHHHHhhhhcCeEEEEcCCCCC-CCCCCC-CCCCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Q 023794 5 EGPVIFCLHGGGY-SGLSFALAAGKIKEKARVVAMDLRGHG-KSSSEN-DIDLSIETMCNDVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 5 ~~p~vv~~HG~~~-~~~~~~~~~~~l~~~~~vi~~d~~G~G-~S~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lv 81 (277)
.+..+|++||+-+ +...|...+......+.=..+..+|+- ...... +..+--...++++.+.+... ..+++-.+
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~---si~kISfv 155 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY---SIEKISFV 155 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhcc---ccceeeee
Confidence 4468999999766 566676666555543222233333332 111111 11222233444444444433 35789999
Q ss_pred EeChhHHHHHHH
Q 023794 82 GHSMGGSVAVHV 93 (277)
Q Consensus 82 G~S~Gg~ia~~~ 93 (277)
|||+||.++-.+
T Consensus 156 ghSLGGLvar~A 167 (405)
T KOG4372|consen 156 GHSLGGLVARYA 167 (405)
T ss_pred eeecCCeeeeEE
Confidence 999999876543
No 225
>PLN02753 triacylglycerol lipase
Probab=95.69 E-value=0.024 Score=46.81 Aligned_cols=21 Identities=43% Similarity=0.678 Sum_probs=18.9
Q ss_pred CcEEEEEeChhHHHHHHHHHH
Q 023794 76 PSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
.++++.|||+||.+|...|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 479999999999999999864
No 226
>PLN02719 triacylglycerol lipase
Probab=95.68 E-value=0.023 Score=46.79 Aligned_cols=21 Identities=48% Similarity=0.683 Sum_probs=18.8
Q ss_pred CcEEEEEeChhHHHHHHHHHH
Q 023794 76 PSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
.++++.|||+||.+|...|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 379999999999999998865
No 227
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.36 E-value=0.17 Score=42.25 Aligned_cols=86 Identities=17% Similarity=0.280 Sum_probs=64.6
Q ss_pred HHHhhhhcCeEEEEcCCCCCCCCC--CCCCC-----------CcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHH
Q 023794 25 AAGKIKEKARVVAMDLRGHGKSSS--ENDID-----------LSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAV 91 (277)
Q Consensus 25 ~~~~l~~~~~vi~~d~~G~G~S~~--~~~~~-----------~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~ 91 (277)
+...+.+||.++.=|- ||..+.. ..... .++...+.--+++++...+..++.-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 4566788999999997 7765543 11111 13444444556677777777778889999999999999
Q ss_pred HHHHHhcccccceEEEEccCC
Q 023794 92 HVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 92 ~~a~~~p~~~v~~lvl~~~~~ 112 (277)
..|++|| +.+.+|+.-+|..
T Consensus 131 ~~AQryP-~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 131 MAAQRYP-EDFDGILAGAPAI 150 (474)
T ss_pred HHHHhCh-hhcCeEEeCCchH
Confidence 9999999 9999999988874
No 228
>PLN02847 triacylglycerol lipase
Probab=95.28 E-value=0.04 Score=46.24 Aligned_cols=20 Identities=40% Similarity=0.642 Sum_probs=18.3
Q ss_pred cEEEEEeChhHHHHHHHHHH
Q 023794 77 SIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 77 ~~~lvG~S~Gg~ia~~~a~~ 96 (277)
+++++|||+||.+|..++..
T Consensus 252 kLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 252 KIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred eEEEeccChHHHHHHHHHHH
Confidence 79999999999999988775
No 229
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.19 E-value=0.018 Score=32.97 Aligned_cols=19 Identities=21% Similarity=0.226 Sum_probs=11.5
Q ss_pred CCCCeEEEEccCCCCcccH
Q 023794 4 TEGPVIFCLHGGGYSGLSF 22 (277)
Q Consensus 4 ~~~p~vv~~HG~~~~~~~~ 22 (277)
..+|+|++.||+.+++..|
T Consensus 41 ~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 41 KKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT--EEEEE--TT--GGGG
T ss_pred CCCCcEEEECCcccChHHH
Confidence 4689999999999999888
No 230
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.83 E-value=0.18 Score=39.00 Aligned_cols=107 Identities=20% Similarity=0.272 Sum_probs=71.9
Q ss_pred CCCeEEEEccCCCCccc----HHHHHHh---h-------hhcCeEEEEcCC-CCCCCCCCCC--CCCcHHHHHHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLS----FALAAGK---I-------KEKARVVAMDLR-GHGKSSSEND--IDLSIETMCNDVLAVL 67 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~----~~~~~~~---l-------~~~~~vi~~d~~-G~G~S~~~~~--~~~~~~~~~~d~~~~l 67 (277)
..|..+.+.|.++.+.. |+.+-+. + -+...++.+|.| |.|.|.-... ...+.++.+.|+.+++
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ll 109 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELL 109 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHH
Confidence 56788999997655433 4333221 1 124567888877 7787754432 3457889999999999
Q ss_pred HHHhcCC----CCcEEEEEeChhHHHHHHHHHHhc--------ccccceEEEEccC
Q 023794 68 KEMYGEQ----PPSIVLVGHSMGGSVAVHVAAKKT--------LRSLHGLVVVDVV 111 (277)
Q Consensus 68 ~~l~~~~----~~~~~lvG~S~Gg~ia~~~a~~~p--------~~~v~~lvl~~~~ 111 (277)
+.+.... ..+++++.-|+||-+|..++...- +..+.+++|=++.
T Consensus 110 k~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 110 KGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSW 165 (414)
T ss_pred HHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcc
Confidence 9886432 348999999999999999887532 0235566665554
No 231
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.62 E-value=0.073 Score=42.32 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHH
Q 023794 57 ETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 57 ~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
..+.+++..++... ..-++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~---~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELY---PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhc---CCcEEEEecCChHHHHHHHHHHH
Confidence 45666677776666 33479999999999999998876
No 232
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.13 E-value=0.14 Score=35.66 Aligned_cols=105 Identities=17% Similarity=0.121 Sum_probs=60.6
Q ss_pred CCCCCCeEEEEccCCCCcccHHH------HHHhhhhc-CeEEEEcCCCCCCCCCCCCC---CCcHHHHHHHHHHHHHHHh
Q 023794 2 AGTEGPVIFCLHGGGYSGLSFAL------AAGKIKEK-ARVVAMDLRGHGKSSSENDI---DLSIETMCNDVLAVLKEMY 71 (277)
Q Consensus 2 ~g~~~p~vv~~HG~~~~~~~~~~------~~~~l~~~-~~vi~~d~~G~G~S~~~~~~---~~~~~~~~~d~~~~l~~l~ 71 (277)
.|..+.+||+++-.++....|.. ++..+..| ...++++-. ...+.-... ....+....--+-++++..
T Consensus 22 yGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~gl--dsESf~a~h~~~adr~~rH~AyerYv~eEal 99 (227)
T COG4947 22 YGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSGL--DSESFLATHKNAADRAERHRAYERYVIEEAL 99 (227)
T ss_pred ccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEeccc--chHhHhhhcCCHHHHHHHHHHHHHHHHHhhc
Confidence 35567778888877666666543 33334443 344444422 111111110 1122222222233344432
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCC
Q 023794 72 GEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 72 ~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
+.+.++-|.||||..|..+.-++| +...++|.+++..
T Consensus 100 ---pgs~~~sgcsmGayhA~nfvfrhP-~lftkvialSGvY 136 (227)
T COG4947 100 ---PGSTIVSGCSMGAYHAANFVFRHP-HLFTKVIALSGVY 136 (227)
T ss_pred ---CCCccccccchhhhhhhhhheeCh-hHhhhheeeccee
Confidence 234678899999999999999999 9999999988754
No 233
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.12 E-value=0.46 Score=35.39 Aligned_cols=65 Identities=22% Similarity=0.216 Sum_probs=42.2
Q ss_pred cCeEEEEcCCCC-CC-C-CCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 32 KARVVAMDLRGH-GK-S-SSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 32 ~~~vi~~d~~G~-G~-S-~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
++.+..+++|.. +- + -.......++.+-++.+.+.++.... ..++++++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHH
Confidence 456667777751 11 0 01112345777777777777776432 235799999999999999988764
No 234
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=93.86 E-value=0.14 Score=36.64 Aligned_cols=57 Identities=18% Similarity=0.156 Sum_probs=42.9
Q ss_pred CccEEEEEeCCCCCCchh---hhhhhcCCc-----cEEEeCCCCCcccccCh---HHHHHHHHHHHHh
Q 023794 200 PVPKLLLLAGTDRLDRPL---TIGQMQGKF-----QMVVVRHTGHAIQEDAP---EEFASLILNFIAR 256 (277)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~---~~~~~~~~~-----~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~ 256 (277)
+++.|.|-|+.|.++..- ....++.+. ..++.+++||+-...-+ +++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 356777999999987654 344555433 67888999999887755 7788999999875
No 235
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=93.32 E-value=1 Score=35.78 Aligned_cols=57 Identities=18% Similarity=0.204 Sum_probs=38.3
Q ss_pred cCCCccEEEEEeCCCCCCchhhhhhhc---CCc-cEEEeCCCCCcccccChHHHHHHHHHHHHh
Q 023794 197 LSCPVPKLLLLAGTDRLDRPLTIGQMQ---GKF-QMVVVRHTGHAIQEDAPEEFASLILNFIAR 256 (277)
Q Consensus 197 ~~i~~P~l~i~g~~D~~~~~~~~~~~~---~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 256 (277)
..+.+|..++.+..|.+..++...-.. |+. -+..+|+..|..-- ..+.+.|..|++.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n---~~i~esl~~flnr 386 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN---QFIKESLEPFLNR 386 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH---HHHHHHHHHHHHH
Confidence 567789999999999887766554433 443 57888999887543 3344455555544
No 236
>PRK12467 peptide synthase; Provisional
Probab=92.47 E-value=0.78 Score=48.97 Aligned_cols=99 Identities=22% Similarity=0.204 Sum_probs=71.6
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
.+.|++.|....+...+..+...+..+..++.+..++.-.... ...+++.++....+.+...... .+..+.|+|+
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~~--~p~~l~g~s~ 3766 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQAK--GPYGLLGWSL 3766 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhccC--CCeeeeeeec
Confidence 3569999998888878888888887788888888776532222 1346778888888888776433 3589999999
Q ss_pred hHHHHHHHHHHh---cccccceEEEEcc
Q 023794 86 GGSVAVHVAAKK---TLRSLHGLVVVDV 110 (277)
Q Consensus 86 Gg~ia~~~a~~~---p~~~v~~lvl~~~ 110 (277)
||.++..++..- . +.+.-+.+++.
T Consensus 3767 g~~~a~~~~~~l~~~g-~~~~~~~~~~~ 3793 (3956)
T PRK12467 3767 GGTLARLVAELLEREG-ESEAFLGLFDN 3793 (3956)
T ss_pred chHHHHHHHHHHHHcC-CceeEEEEEec
Confidence 999999888752 2 44555555543
No 237
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.19 E-value=0.37 Score=40.59 Aligned_cols=56 Identities=27% Similarity=0.422 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHH-----hcc-----cccceEEEEccC
Q 023794 56 IETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAK-----KTL-----RSLHGLVVVDVV 111 (277)
Q Consensus 56 ~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~-----~p~-----~~v~~lvl~~~~ 111 (277)
+..-...+.+.+...+..+..+++.+||||||.++=.+... .|+ ....++++++.+
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 33333334444443333235689999999999887666543 221 235667776654
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.81 E-value=0.39 Score=36.54 Aligned_cols=23 Identities=35% Similarity=0.577 Sum_probs=20.4
Q ss_pred CcEEEEEeChhHHHHHHHHHHhc
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
.++.|-|||+||.+|..+..++.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred ceEEEeccccchHHHHHhccccC
Confidence 47899999999999999988864
No 239
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.81 E-value=0.39 Score=36.54 Aligned_cols=23 Identities=35% Similarity=0.577 Sum_probs=20.4
Q ss_pred CcEEEEEeChhHHHHHHHHHHhc
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
.++.|-|||+||.+|..+..++.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred ceEEEeccccchHHHHHhccccC
Confidence 47899999999999999988864
No 240
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=91.61 E-value=2.5 Score=35.94 Aligned_cols=102 Identities=23% Similarity=0.318 Sum_probs=57.4
Q ss_pred CCeEEEEccCCC---CcccHHHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--HhcCCCCcE
Q 023794 6 GPVIFCLHGGGY---SGLSFALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKE--MYGEQPPSI 78 (277)
Q Consensus 6 ~p~vv~~HG~~~---~~~~~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~~~ 78 (277)
+-.|+-+||+|. ++..-.......++ +..|+.+|+-=-- ..++....++..-...-+|+. +.+..-+++
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAP----EaPFPRaleEv~fAYcW~inn~allG~TgEri 471 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAP----EAPFPRALEEVFFAYCWAINNCALLGSTGERI 471 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCC----CCCCCcHHHHHHHHHHHHhcCHHHhCcccceE
Confidence 346788999763 33333333333333 7999999984211 112233444443333333332 222234789
Q ss_pred EEEEeChhHHHHHHHHHH---hcccccceEEEEccC
Q 023794 79 VLVGHSMGGSVAVHVAAK---KTLRSLHGLVVVDVV 111 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~---~p~~~v~~lvl~~~~ 111 (277)
+++|-|.||.+.+-.|.+ +....-.|+++.-++
T Consensus 472 v~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 472 VLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred EEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 999999999876666544 221445778776554
No 241
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.82 E-value=6.5 Score=33.01 Aligned_cols=47 Identities=15% Similarity=0.225 Sum_probs=34.4
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHh----cccccceEEEEccCCCcchHHhH
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKK----TLRSLHGLVVVDVVEGTAMASLI 120 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~----p~~~v~~lvl~~~~~~~~~~~~~ 120 (277)
+..||.|||+|+|+.+.......- -.+.|..+++++++.........
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~ 495 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWL 495 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHH
Confidence 667999999999999988665531 12568899999887665544433
No 242
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=85.32 E-value=6 Score=26.41 Aligned_cols=58 Identities=16% Similarity=0.284 Sum_probs=35.6
Q ss_pred CCCCCeEEEEccCCCCcccH--HHHHHhh-hhc---CeE----EEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 023794 3 GTEGPVIFCLHGGGYSGLSF--ALAAGKI-KEK---ARV----VAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEM 70 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~--~~~~~~l-~~~---~~v----i~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l 70 (277)
.+.+|.|+-+||+++....| +.+++.| .+| -.| -..|+| ....++++-+++...|...
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP----------~~~~v~~Yk~~L~~~I~~~ 116 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP----------HNSNVDEYKEQLKSWIRGN 116 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC----------CchHHHHHHHHHHHHHHHH
Confidence 35789999999999988877 3445553 222 112 223333 1336677777777777654
No 243
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=85.09 E-value=7.7 Score=24.73 Aligned_cols=82 Identities=13% Similarity=0.168 Sum_probs=49.3
Q ss_pred HHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhH--HHHHHHHHHhc
Q 023794 22 FALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGG--SVAVHVAAKKT 98 (277)
Q Consensus 22 ~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg--~ia~~~a~~~p 98 (277)
|..+.+.+.. +|..=.+.++.+|.+-...-.....+.=...+..+++.. ...+++|||-|--. -+-..+|.++|
T Consensus 13 y~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f---P~~kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF---PERKFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC---CCCcEEEEeeCCCcCHHHHHHHHHHCC
Confidence 4455666655 677777777777655322100111122234566666666 44689999988443 33445677899
Q ss_pred ccccceEEE
Q 023794 99 LRSLHGLVV 107 (277)
Q Consensus 99 ~~~v~~lvl 107 (277)
++|.++.+
T Consensus 90 -~~i~ai~I 97 (100)
T PF09949_consen 90 -GRILAIYI 97 (100)
T ss_pred -CCEEEEEE
Confidence 99988865
No 244
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=83.82 E-value=5.4 Score=33.23 Aligned_cols=97 Identities=20% Similarity=0.132 Sum_probs=57.0
Q ss_pred CCeEEEEccCCCCcccHHH--HHHhhhhcCeEEE-EcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 023794 6 GPVIFCLHGGGYSGLSFAL--AAGKIKEKARVVA-MDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG 82 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~--~~~~l~~~~~vi~-~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG 82 (277)
.|..|.+.|+=. .+-|.. +++.| +...+. =|.|=-|.+--.....+ -+.+.+-|.+-|+.|+- +.+.++|-|
T Consensus 289 PPL~VYFSGyR~-aEGFEgy~MMk~L--g~PfLL~~DpRleGGaFYlGs~ey-E~~I~~~I~~~L~~LgF-~~~qLILSG 363 (511)
T TIGR03712 289 PPLNVYFSGYRP-AEGFEGYFMMKRL--GAPFLLIGDPRLEGGAFYLGSDEY-EQGIINVIQEKLDYLGF-DHDQLILSG 363 (511)
T ss_pred CCeEEeeccCcc-cCcchhHHHHHhc--CCCeEEeeccccccceeeeCcHHH-HHHHHHHHHHHHHHhCC-CHHHeeecc
Confidence 355677777543 444443 34444 334333 47775554422111112 33445556677777743 245799999
Q ss_pred eChhHHHHHHHHHHhcccccceEEEEcc
Q 023794 83 HSMGGSVAVHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 83 ~S~Gg~ia~~~a~~~p~~~v~~lvl~~~ 110 (277)
.|||..-|+.|++..- ..++|+--|
T Consensus 364 lSMGTfgAlYYga~l~---P~AIiVgKP 388 (511)
T TIGR03712 364 LSMGTFGALYYGAKLS---PHAIIVGKP 388 (511)
T ss_pred ccccchhhhhhcccCC---CceEEEcCc
Confidence 9999999999998742 456666444
No 245
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=82.51 E-value=3.5 Score=32.26 Aligned_cols=22 Identities=32% Similarity=0.376 Sum_probs=18.5
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~ 95 (277)
+.++..++|||+|-..|+.++.
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhC
Confidence 6678899999999988887764
No 246
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=81.67 E-value=27 Score=28.38 Aligned_cols=86 Identities=20% Similarity=0.182 Sum_probs=59.7
Q ss_pred CeEEEEccCCCCc-------ccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEE
Q 023794 7 PVIFCLHGGGYSG-------LSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIV 79 (277)
Q Consensus 7 p~vv~~HG~~~~~-------~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 79 (277)
-.||++||-..+. ..|..+++.+.+.=-+-.+|..-+|.-+ .+++-+.-++.++... . -.
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~-------GleeDa~~lR~~a~~~----~--~~ 238 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD-------GLEEDAYALRLFAEVG----P--EL 238 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc-------chHHHHHHHHHHHHhC----C--cE
Confidence 4599999965543 4588899888876667778887666433 3555566666666543 2 28
Q ss_pred EEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 80 LVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 80 lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
++..|+.=..++ |. +||-++.+++..
T Consensus 239 lva~S~SKnfgL-----Yg-ERVGa~~vva~~ 264 (396)
T COG1448 239 LVASSFSKNFGL-----YG-ERVGALSVVAED 264 (396)
T ss_pred EEEehhhhhhhh-----hh-hccceeEEEeCC
Confidence 888887655544 66 899999998653
No 247
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=79.13 E-value=8.4 Score=31.50 Aligned_cols=59 Identities=8% Similarity=0.063 Sum_probs=40.1
Q ss_pred cCCCccEEEEEeCCCCCCchh-hhhhhcCCccEEEeCCCCCcccccC-----hHHHHHHHHHHHH
Q 023794 197 LSCPVPKLLLLAGTDRLDRPL-TIGQMQGKFQMVVVRHTGHAIQEDA-----PEEFASLILNFIA 255 (277)
Q Consensus 197 ~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~e~-----p~~~~~~i~~fl~ 255 (277)
..-.-.+|+|.|++|++.... ...+-..+..+.+.|+++|...+.. .++....|.+|..
T Consensus 348 r~~~~rmlFVYG~nDPW~A~~f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 348 RNNGPRMLFVYGENDPWSAEPFRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HhCCCeEEEEeCCCCCcccCccccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 444556899999999974322 2223335677888899999876542 2566777777765
No 248
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=78.05 E-value=9.7 Score=22.77 Aligned_cols=26 Identities=27% Similarity=0.438 Sum_probs=20.4
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 73 EQPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 73 ~~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
.+++++.++|-|-|=.+|.+.+..+.
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CCCceEEEEecCCcccHHHHHHHHhc
Confidence 36789999999999999988888763
No 249
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=77.03 E-value=21 Score=26.20 Aligned_cols=64 Identities=14% Similarity=0.207 Sum_probs=46.7
Q ss_pred eEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh----hHHHHHHHHHHhcccccceEEEEc
Q 023794 34 RVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM----GGSVAVHVAAKKTLRSLHGLVVVD 109 (277)
Q Consensus 34 ~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~----Gg~ia~~~a~~~p~~~v~~lvl~~ 109 (277)
+|+..|.++. ..|+.+.+++.+.++++.. ++ .++|+|+|. |..++-++|.+.-...+..++-+.
T Consensus 79 ~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~---~p-~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l~ 146 (202)
T cd01714 79 RAILVSDRAF--------AGADTLATAKALAAAIKKI---GV-DLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKIE 146 (202)
T ss_pred EEEEEecccc--------cCCChHHHHHHHHHHHHHh---CC-CEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEEE
Confidence 5666666532 2567889999999988876 43 589999998 889999999885434566666553
No 250
>PRK10279 hypothetical protein; Provisional
Probab=74.88 E-value=4.6 Score=31.69 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=23.7
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 66 VLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 66 ~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
+++.|...+...-.++|-|+|+.++..||...
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 33444333666678999999999999999754
No 251
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=74.04 E-value=4.7 Score=31.78 Aligned_cols=32 Identities=19% Similarity=0.287 Sum_probs=23.3
Q ss_pred HHHHhcCCCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 67 LKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 67 l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
|+.|...+...-.++|-|+|+.++..||..++
T Consensus 34 L~aLee~gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 34 IKALEEAGIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 33333335555689999999999999998643
No 252
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=74.04 E-value=16 Score=25.35 Aligned_cols=56 Identities=27% Similarity=0.287 Sum_probs=35.3
Q ss_pred HHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHH
Q 023794 25 AAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHV 93 (277)
Q Consensus 25 ~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~ 93 (277)
+.+.+.++-.|++.|.+| ...+-+++++.+..+-+. +.+=++++|-|.|=--++.-
T Consensus 60 il~~i~~~~~vi~Ld~~G---------k~~sSe~fA~~l~~~~~~----G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 60 ILAAIPKGSYVVLLDIRG---------KALSSEEFADFLERLRDD----GRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHhcCCCCeEEEEecCC---------CcCChHHHHHHHHHHHhc----CCeEEEEEeCcccCCHHHHH
Confidence 455666688899999996 345666666555544332 32236788999885544444
No 253
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=73.80 E-value=2.8 Score=33.25 Aligned_cols=27 Identities=22% Similarity=0.260 Sum_probs=20.0
Q ss_pred HhcCCCCcEEEEEeChhHHHHHHHHHH
Q 023794 70 MYGEQPPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 70 l~~~~~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
+...+.++-.++|||+|=..|+.++..
T Consensus 78 l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 78 LRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hcccccccceeeccchhhHHHHHHCCc
Confidence 333367788999999998887766543
No 254
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=73.78 E-value=7.6 Score=29.95 Aligned_cols=56 Identities=16% Similarity=0.162 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHH---HhcccccceEEEEccCCCc
Q 023794 58 TMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAA---KKTLRSLHGLVVVDVVEGT 114 (277)
Q Consensus 58 ~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~---~~p~~~v~~lvl~~~~~~~ 114 (277)
.+.+.+.+-++.+-...-.+++|.|-|+|+.-+...-. ..- +++.+.++.+++...
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~-~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLR-DRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhh-hhcceEEEeCCCCCC
Confidence 33444444455553333458999999999886655432 223 579999998886543
No 255
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=72.78 E-value=5.4 Score=28.27 Aligned_cols=25 Identities=28% Similarity=0.384 Sum_probs=20.9
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
+...-.+.|-|.|+.++..++...+
T Consensus 24 gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 24 GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 5556689999999999999998654
No 256
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=72.48 E-value=5.5 Score=31.15 Aligned_cols=22 Identities=36% Similarity=0.403 Sum_probs=18.4
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~ 95 (277)
+.++-.++|||+|-..|+.++.
T Consensus 80 Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 80 GVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred CCcccEEEecCHHHHHHHHHhC
Confidence 6677899999999998877664
No 257
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=72.04 E-value=6.4 Score=30.38 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=23.2
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 66 VLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 66 ~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
+++.|...+..--.+.|-|+|+.++..||...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 33333333555568999999999999999864
No 258
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=71.66 E-value=7.5 Score=28.12 Aligned_cols=33 Identities=21% Similarity=0.129 Sum_probs=23.4
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 65 AVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 65 ~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
.+++.+...+...-.++|-|.||.+|..++..+
T Consensus 16 Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 334444333455568999999999999999754
No 259
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=71.34 E-value=17 Score=25.60 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=30.6
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEcc
Q 023794 55 SIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 55 ~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~ 110 (277)
..+...+++.++++.+...+ +++.++|-|..|..-+.++...+ +.|..++=.++
T Consensus 49 ~~~~~~~~l~~~L~~~~~~g-k~I~~yGA~~kg~tlln~~g~~~-~~I~~vvD~np 102 (160)
T PF08484_consen 49 RVEQSKAELREFLEKLKAEG-KRIAGYGAGAKGNTLLNYFGLDN-DLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---EEEE---SHHHHHHHHHT--T-TTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHHHcC-CEEEEECcchHHHHHHHHhCCCc-ceeEEEEeCCh
Confidence 34445556667776665544 67999999999999999987766 55666665443
No 260
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=71.04 E-value=7.1 Score=29.11 Aligned_cols=24 Identities=21% Similarity=0.122 Sum_probs=20.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHh
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
+.+.-.++|-|.|+.++..+|..+
T Consensus 26 gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 26 GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred CCCceEEEEeCHHHHHHHHHHcCC
Confidence 555568999999999999999754
No 261
>COG3933 Transcriptional antiterminator [Transcription]
Probab=70.83 E-value=39 Score=28.12 Aligned_cols=78 Identities=22% Similarity=0.217 Sum_probs=56.4
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
.-..||..||....+. ...++..|-..--+.++|+| ...+..+..+.+.+-+++. +..+=.++=..
T Consensus 108 ~v~vIiiAHG~sTASS-maevanrLL~~~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~---~~~~GlllLVD 173 (470)
T COG3933 108 RVKVIIIAHGYSTASS-MAEVANRLLGEEIFIAIDMP----------LDVSPSDVLEKLKEYLKER---DYRSGLLLLVD 173 (470)
T ss_pred ceeEEEEecCcchHHH-HHHHHHHHhhccceeeecCC----------CcCCHHHHHHHHHHHHHhc---CccCceEEEEe
Confidence 3457999999765443 44566666555678999998 5678889888888888887 44454677789
Q ss_pred hhHHHHHHHHHH
Q 023794 85 MGGSVAVHVAAK 96 (277)
Q Consensus 85 ~Gg~ia~~~a~~ 96 (277)
||...+..=...
T Consensus 174 MGSL~~f~~~i~ 185 (470)
T COG3933 174 MGSLTSFGSIIS 185 (470)
T ss_pred cchHHHHHHHHH
Confidence 999887755443
No 262
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=70.79 E-value=6.3 Score=31.09 Aligned_cols=32 Identities=38% Similarity=0.344 Sum_probs=24.6
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 66 VLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 66 ~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
+++.|...+.+.-.+.|-|+|+.++..+|..+
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 34444444677789999999999999999854
No 263
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=68.19 E-value=35 Score=25.21 Aligned_cols=60 Identities=13% Similarity=0.113 Sum_probs=34.4
Q ss_pred CCCeEEEEccCCCCcccHHHHHHh-hhh-cC-eEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGK-IKE-KA-RVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~-l~~-~~-~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lv 81 (277)
+.-+|++.||...++.......+. +.+ +| +|++...-||- ++..+++.++..+.+.++|+
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP-----------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP-----------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC-----------------cHHHHHHHHHHcCCceEEEe
Confidence 345678888877666554444443 333 66 56665554431 33455666665566767665
No 264
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=68.07 E-value=55 Score=25.46 Aligned_cols=90 Identities=20% Similarity=0.198 Sum_probs=50.9
Q ss_pred CCeEEEEccCCCCccc------HHHHHHhh-hh-cCeEEEEcCCCCCCC--------CCCC------CCCCcHHHHHHHH
Q 023794 6 GPVIFCLHGGGYSGLS------FALAAGKI-KE-KARVVAMDLRGHGKS--------SSEN------DIDLSIETMCNDV 63 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~------~~~~~~~l-~~-~~~vi~~d~~G~G~S--------~~~~------~~~~~~~~~~~d~ 63 (277)
+..|||+=|.+.+... -..+...+ .. +-..+++=.+|-|.. .... .....+++-+.+.
T Consensus 1 k~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~a 80 (277)
T PF09994_consen 1 KRIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDA 80 (277)
T ss_pred CcEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHH
Confidence 3567888886544332 12344445 22 335555666788771 1110 0123455544444
Q ss_pred HHHH-HHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 64 LAVL-KEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 64 ~~~l-~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
...+ +... ..+++.++|+|-|+..|-.+|..-
T Consensus 81 y~~l~~~~~--~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 81 YRFLSKNYE--PGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHhccC--CcceEEEEecCccHHHHHHHHHHH
Confidence 4433 3332 235799999999999999998653
No 265
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=67.73 E-value=7.6 Score=30.21 Aligned_cols=22 Identities=27% Similarity=0.274 Sum_probs=18.2
Q ss_pred CCcEEEEEeChhHHHHHHHHHH
Q 023794 75 PPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
..+..++|||+|=+.|+.++..
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCC
Confidence 6778999999999888877643
No 266
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=65.97 E-value=9.2 Score=28.34 Aligned_cols=25 Identities=16% Similarity=0.211 Sum_probs=20.9
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
+...-.+.|.|.|+.+|..+|...+
T Consensus 24 g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 24 GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 4455589999999999999998764
No 267
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=65.50 E-value=9.4 Score=32.28 Aligned_cols=61 Identities=13% Similarity=0.153 Sum_probs=44.2
Q ss_pred CCccEEEEEeCCCCCCchhhhhhhc---------------CCccEEEeCCCCCccccc--ChHHHHHHHHHHHHhcCC
Q 023794 199 CPVPKLLLLAGTDRLDRPLTIGQMQ---------------GKFQMVVVRHTGHAIQED--APEEFASLILNFIARNRI 259 (277)
Q Consensus 199 i~~P~l~i~g~~D~~~~~~~~~~~~---------------~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~~~~ 259 (277)
-.-.+++.||..|+++++.....++ .-.++..+||.+|..--. .+-.....|.+|+++-..
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCC
Confidence 3456799999999987765332221 124899999999988654 445788999999987554
No 268
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=64.65 E-value=14 Score=26.27 Aligned_cols=24 Identities=29% Similarity=0.252 Sum_probs=19.4
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHh
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
+...-.++|-|.|+.+|..++...
T Consensus 26 ~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 26 GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred CCCeeEEEEECHHHHHHHHHHcCC
Confidence 444568999999999999998653
No 269
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=64.19 E-value=4.8 Score=33.34 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=24.9
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 65 AVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 65 ~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
-+++.|...+..+-++.|-|.|+.+|..++...+
T Consensus 90 GVLkaL~E~gl~p~vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 90 GVLKALFEANLLPRIISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCH
Confidence 4444444335555689999999999999998655
No 270
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=64.01 E-value=5.4 Score=27.90 Aligned_cols=51 Identities=25% Similarity=0.468 Sum_probs=28.6
Q ss_pred EcCCCCCCCCCCCC--CCCcHHHHHHHHHHHHHHHh-----cCCCCcEEEEEeChhHH
Q 023794 38 MDLRGHGKSSSEND--IDLSIETMCNDVLAVLKEMY-----GEQPPSIVLVGHSMGGS 88 (277)
Q Consensus 38 ~d~~G~G~S~~~~~--~~~~~~~~~~d~~~~l~~l~-----~~~~~~~~lvG~S~Gg~ 88 (277)
+-+-|||....... ..++.++++.-+..+-+.+. ...++++.|+|.|+++.
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 33458887722211 25788888888844444433 12467999999999987
No 271
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=63.67 E-value=75 Score=25.39 Aligned_cols=89 Identities=16% Similarity=0.151 Sum_probs=50.1
Q ss_pred CCeEEEEccCC----CCc-ccHHHHHHhhhh--cCeEEEEcCCCCCCCCCCCC---------------CCCcHHHHHHHH
Q 023794 6 GPVIFCLHGGG----YSG-LSFALAAGKIKE--KARVVAMDLRGHGKSSSEND---------------IDLSIETMCNDV 63 (277)
Q Consensus 6 ~p~vv~~HG~~----~~~-~~~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~---------------~~~~~~~~~~d~ 63 (277)
+..|+|+-|.. ... ..--.+...|+. +.+++++=.+|.|.-..... +.+++.+.+...
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 45788888832 211 223345566654 57777777778875522110 112233333333
Q ss_pred HHHH-HHHhcCCCCcEEEEEeChhHHHHHHHHHH
Q 023794 64 LAVL-KEMYGEQPPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 64 ~~~l-~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
..++ .+.. .-++++++|+|-|+.+|--+|..
T Consensus 111 YrFL~~~ye--pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 111 YRFLIFNYE--PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHhcC--CCCeEEEeeccchhHHHHHHHHH
Confidence 2332 2222 12589999999999999888865
No 272
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=63.66 E-value=9.5 Score=31.80 Aligned_cols=41 Identities=7% Similarity=-0.018 Sum_probs=26.5
Q ss_pred ccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCCCCccccc
Q 023794 201 VPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHTGHAIQED 241 (277)
Q Consensus 201 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 241 (277)
.-+++++|+.||+...............++|++++|..-+-
T Consensus 377 tnviFtNG~~DPW~~lgv~~~~~~~~~~~~I~g~~Hc~Dl~ 417 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSDSSDSVPAIVIPGGAHCSDLY 417 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S-SSSSEEEEEETT--TTGGGS
T ss_pred CeEEeeCCCCCCcccccCCCCCCCCcccEEECCCeeecccc
Confidence 46899999999987666555555566678899999987554
No 273
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=63.63 E-value=12 Score=26.55 Aligned_cols=25 Identities=24% Similarity=0.221 Sum_probs=20.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
+...-.++|-|.|+.+|..++..++
T Consensus 26 g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 26 GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 4455689999999999999987654
No 274
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=62.89 E-value=40 Score=21.99 Aligned_cols=74 Identities=23% Similarity=0.248 Sum_probs=46.1
Q ss_pred eEEEEccCCCCcccHHHHHHhhhhc--CeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 8 VIFCLHGGGYSGLSFALAAGKIKEK--ARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 8 ~vv~~HG~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
.||.-|| .-.......++.+... ..+.++++. ...+.+++.+.+.+.++.+.. .+.++++.-=+
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~----------~~~~~~~~~~~l~~~i~~~~~--~~~vlil~Dl~ 67 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY----------PDESIEDFEEKLEEAIEELDE--GDGVLILTDLG 67 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET----------TTSCHHHHHHHHHHHHHHCCT--TSEEEEEESST
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc----------CCCCHHHHHHHHHHHHHhccC--CCcEEEEeeCC
Confidence 4788898 3344455555555433 478888876 245889999999999977731 24555555555
Q ss_pred hHHHHHHHHH
Q 023794 86 GGSVAVHVAA 95 (277)
Q Consensus 86 Gg~ia~~~a~ 95 (277)
||...-..+.
T Consensus 68 ggsp~n~a~~ 77 (116)
T PF03610_consen 68 GGSPFNEAAR 77 (116)
T ss_dssp TSHHHHHHHH
T ss_pred CCccchHHHH
Confidence 5544444443
No 275
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=61.97 E-value=55 Score=26.81 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=26.9
Q ss_pred EEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCC
Q 023794 9 IFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSS 47 (277)
Q Consensus 9 vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~ 47 (277)
|||+|... ...|+.+++.|.+ |+.|..+-..+.+...
T Consensus 2 il~~~~~~--p~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNF--PGQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCC--chhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 78999743 2448889999976 8998887776665433
No 276
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=60.46 E-value=19 Score=25.10 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=30.5
Q ss_pred HHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCC-CcEEEEEeChh
Q 023794 25 AAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQP-PSIVLVGHSMG 86 (277)
Q Consensus 25 ~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~lvG~S~G 86 (277)
+...+..+-.++++|-.| ..++-+++++.+...... +. +=++++|-+.|
T Consensus 60 il~~i~~~~~~i~Ld~~G---------k~~sS~~fA~~l~~~~~~----g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 60 ILKKIPPNDYVILLDERG---------KQLSSEEFAKKLERWMNQ----GKSDIVFIIGGADG 109 (155)
T ss_dssp HHCTSHTTSEEEEE-TTS---------EE--HHHHHHHHHHHHHT----TS-EEEEEE-BTTB
T ss_pred HHhhccCCCEEEEEcCCC---------ccCChHHHHHHHHHHHhc----CCceEEEEEecCCC
Confidence 444555677899999986 356777777777666554 22 23678999998
No 277
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=59.95 E-value=5.6 Score=32.81 Aligned_cols=40 Identities=25% Similarity=0.324 Sum_probs=27.5
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceE
Q 023794 65 AVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGL 105 (277)
Q Consensus 65 ~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~l 105 (277)
-+++.|...+..+-++.|-|.|+.+|..+|...+ +.+..+
T Consensus 84 GVlkaL~e~gllp~iI~GtSAGAivaalla~~t~-~el~~~ 123 (407)
T cd07232 84 GVVKALLDADLLPNVISGTSGGSLVAALLCTRTD-EELKQL 123 (407)
T ss_pred HHHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCH-HHHHHH
Confidence 3444444335555689999999999999998655 444443
No 278
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=56.91 E-value=19 Score=25.32 Aligned_cols=73 Identities=16% Similarity=0.131 Sum_probs=45.2
Q ss_pred EEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCC-----CCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 10 FCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSEN-----DIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 10 v~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~-----~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
|++-|.|++...-++++..|...|.--.+-+|.--.|.... ..+|.++.. ....++.++..+ =+|+|.|
T Consensus 44 vl~cGNGgSaadAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~G---DvLigIS 117 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQPG---DVLIGIS 117 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCCC---CEEEEEe
Confidence 56778888888888898888766666555555554442211 134555543 344555553323 3889988
Q ss_pred hhHH
Q 023794 85 MGGS 88 (277)
Q Consensus 85 ~Gg~ 88 (277)
-.|.
T Consensus 118 TSGN 121 (176)
T COG0279 118 TSGN 121 (176)
T ss_pred CCCC
Confidence 8774
No 279
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=56.78 E-value=31 Score=24.83 Aligned_cols=59 Identities=20% Similarity=0.177 Sum_probs=38.5
Q ss_pred CCCeEEEEccCCCCcccH--HHHHHhhhh-cCeEEEEcC--CCCCCCCCCCCCCCcHHHHHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSF--ALAAGKIKE-KARVVAMDL--RGHGKSSSENDIDLSIETMCNDVLAV 66 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~--~~~~~~l~~-~~~vi~~d~--~G~G~S~~~~~~~~~~~~~~~d~~~~ 66 (277)
.++.+|++-|+.++...- ..+...|.+ |++++.+|= -=||.+.. ..++-++-.+.++.+
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d---LgFs~edR~eniRRv 84 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD---LGFSREDRIENIRRV 84 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC---CCCChHHHHHHHHHH
Confidence 567899999988876653 345556654 999999973 22555432 345666666555544
No 280
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=56.52 E-value=16 Score=31.47 Aligned_cols=24 Identities=13% Similarity=-0.080 Sum_probs=20.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHh
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
+.++-.++|||+|=..|+..|...
T Consensus 263 GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 263 AIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCCCCEEeecCHHHHHHHHHhCCC
Confidence 677789999999999988887654
No 281
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=55.94 E-value=45 Score=23.38 Aligned_cols=47 Identities=26% Similarity=0.384 Sum_probs=26.8
Q ss_pred HhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCC-CcEEEEEeChh
Q 023794 27 GKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQP-PSIVLVGHSMG 86 (277)
Q Consensus 27 ~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~~~~lvG~S~G 86 (277)
..+..+-.+|++|-+| ...+-+++++.+....+. +. +-++++|-+.|
T Consensus 62 ~~l~~~~~~i~LDe~G---------k~~sS~~fA~~l~~~~~~----g~~~i~F~IGGa~G 109 (157)
T PRK00103 62 AALPKGARVIALDERG---------KQLSSEEFAQELERWRDD----GRSDVAFVIGGADG 109 (157)
T ss_pred hhCCCCCEEEEEcCCC---------CcCCHHHHHHHHHHHHhc----CCccEEEEEcCccc
Confidence 3344445678888875 245666666666554322 21 23567777766
No 282
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=53.84 E-value=23 Score=28.08 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=23.2
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 65 AVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 65 ~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
-+++.|...+..+-++.|-|.|+.+|..++...
T Consensus 85 GVlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 85 GVVRTLVEHQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 334444333555568999999999999998743
No 283
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=53.62 E-value=22 Score=27.30 Aligned_cols=22 Identities=18% Similarity=0.158 Sum_probs=18.7
Q ss_pred cEEEEEeChhHHHHHHHHHHhc
Q 023794 77 SIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 77 ~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
--.++|.|.|+.++..++...+
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCc
Confidence 3489999999999999998754
No 284
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=52.70 E-value=23 Score=29.04 Aligned_cols=40 Identities=18% Similarity=0.285 Sum_probs=27.7
Q ss_pred HHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceE
Q 023794 65 AVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGL 105 (277)
Q Consensus 65 ~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~l 105 (277)
-+++.|...+..+-++.|-|.|+.+|..+|...+ +.+..+
T Consensus 100 Gv~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~-~e~~~~ 139 (391)
T cd07229 100 GVVKALWLRGLLPRIITGTATGALIAALVGVHTD-EELLRF 139 (391)
T ss_pred HHHHHHHHcCCCCceEEEecHHHHHHHHHHcCCH-HHHHHH
Confidence 4444554446666689999999999999998544 444333
No 285
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=52.31 E-value=25 Score=26.54 Aligned_cols=21 Identities=29% Similarity=0.256 Sum_probs=18.2
Q ss_pred EEEEEeChhHHHHHHHHHHhc
Q 023794 78 IVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p 98 (277)
-.++|-|.|+.++..++...+
T Consensus 31 ~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 31 TPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CEEEEEcHHHHHHHHHHcCCC
Confidence 479999999999999998653
No 286
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=51.72 E-value=33 Score=27.58 Aligned_cols=18 Identities=33% Similarity=0.316 Sum_probs=14.7
Q ss_pred EEEEEeChhHHHHHHHHH
Q 023794 78 IVLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~ 95 (277)
-.++|||+|=..|+..+.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999988887764
No 287
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=51.46 E-value=18 Score=27.87 Aligned_cols=15 Identities=33% Similarity=0.645 Sum_probs=12.5
Q ss_pred CCCcEEEEEeChhHH
Q 023794 74 QPPSIVLVGHSMGGS 88 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ 88 (277)
+.+.++++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457899999999975
No 288
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=50.61 E-value=15 Score=31.79 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=27.4
Q ss_pred EEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 78 IVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
|+--+.|-||..++..|....+..|.+++...|.
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~ 320 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPN 320 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCc
Confidence 4555789999999999988765789999888775
No 289
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=50.60 E-value=1.5e+02 Score=24.69 Aligned_cols=98 Identities=19% Similarity=0.261 Sum_probs=62.5
Q ss_pred EEccCCCC-cccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCC----------------------CCCcHHHHHHHHHHH
Q 023794 11 CLHGGGYS-GLSFALAAGKIKE-KARVVAMDLRGHGKSSSEND----------------------IDLSIETMCNDVLAV 66 (277)
Q Consensus 11 ~~HG~~~~-~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~----------------------~~~~~~~~~~d~~~~ 66 (277)
++=|...+ ...+..+.+.+.+ |..++.+|.-=.|.+....+ ....++.+++-+..+
T Consensus 5 ~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~ 84 (403)
T PF06792_consen 5 AIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARF 84 (403)
T ss_pred EEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHH
Confidence 33444333 3446666777765 89999999854444432211 012344556666677
Q ss_pred HHHHhcC-CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEc
Q 023794 67 LKEMYGE-QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVD 109 (277)
Q Consensus 67 l~~l~~~-~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~ 109 (277)
+..+... ...-++-+|-|.|..++.......| --+-++++..
T Consensus 85 v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LP-iG~PKlmVST 127 (403)
T PF06792_consen 85 VSDLYDEGKIDGVIGIGGSGGTALATAAMRALP-IGFPKLMVST 127 (403)
T ss_pred HHHHHhcCCccEEEEecCCccHHHHHHHHHhCC-CCCCeEEEEc
Confidence 7776543 3456889999999999999999888 5566665543
No 290
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=50.49 E-value=45 Score=25.17 Aligned_cols=72 Identities=25% Similarity=0.244 Sum_probs=36.0
Q ss_pred HHHHhhhhcC--eEEEEcCCCCCCCCCCCC----CCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHH
Q 023794 24 LAAGKIKEKA--RVVAMDLRGHGKSSSEND----IDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 24 ~~~~~l~~~~--~vi~~d~~G~G~S~~~~~----~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
.++..+++.. .++++-+ -+|.|..-.. ...+.+.+.+-+.++++.+...+.++++++..--|-.-++..+.+
T Consensus 44 ~~a~~~a~~~~~~lv~P~i-~yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~ 121 (237)
T PF02633_consen 44 AVAERAAERLGEALVLPPI-PYGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAAR 121 (237)
T ss_dssp HHHHHHHHHHTHEEE---B---BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEEeCCC-ccccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHH
Confidence 4555555422 3333333 3555543322 245667777777777777765578888887666554445555554
No 291
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=50.18 E-value=27 Score=27.42 Aligned_cols=25 Identities=24% Similarity=0.272 Sum_probs=19.7
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
+..+-++.|.|.|+.+|..++....
T Consensus 95 ~l~~~~i~GtSaGAi~aa~~~~~~~ 119 (298)
T cd07206 95 DLLPRVISGSSAGAIVAALLGTHTD 119 (298)
T ss_pred CCCCCEEEEEcHHHHHHHHHHcCCc
Confidence 4445579999999999999987543
No 292
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=49.44 E-value=34 Score=28.94 Aligned_cols=29 Identities=21% Similarity=0.374 Sum_probs=24.2
Q ss_pred EEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 228 MVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 228 ~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
+.++ .+|||+..++|+...+.+..|+.-.
T Consensus 463 ~r~y-~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 463 LRIY-EAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred EEEe-cCcceeecCChHHHHHHHHHHHhhc
Confidence 4444 5899999999999999999998763
No 293
>PRK02399 hypothetical protein; Provisional
Probab=48.72 E-value=1.6e+02 Score=24.52 Aligned_cols=99 Identities=20% Similarity=0.276 Sum_probs=61.5
Q ss_pred EEEccCCCCc-ccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCC----------------------CCCCcHHHHHHHHHH
Q 023794 10 FCLHGGGYSG-LSFALAAGKIKE-KARVVAMDLRGHGKSSSEN----------------------DIDLSIETMCNDVLA 65 (277)
Q Consensus 10 v~~HG~~~~~-~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~----------------------~~~~~~~~~~~d~~~ 65 (277)
|++=|...+. ..+..+.+.+.+ +..|+.+|.-..|....+. +....++.+++-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 4455554444 345566666665 8999999984444221111 011223455556666
Q ss_pred HHHHHhcC-CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEc
Q 023794 66 VLKEMYGE-QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVD 109 (277)
Q Consensus 66 ~l~~l~~~-~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~ 109 (277)
++..|... +..-++-+|-|.|..++.......| --+-++++..
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LP-iG~PKlmVST 129 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALP-IGVPKLMVST 129 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCC-CCCCeEEEEc
Confidence 66655433 3567899999999999999999888 5565655543
No 294
>PF03283 PAE: Pectinacetylesterase
Probab=48.57 E-value=74 Score=25.96 Aligned_cols=36 Identities=25% Similarity=0.254 Sum_probs=24.4
Q ss_pred CCCcEEEEEeChhHHHHHHHHHH----hcccccceEEEEcc
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAK----KTLRSLHGLVVVDV 110 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~----~p~~~v~~lvl~~~ 110 (277)
+.++++|.|.|.||.-++..+-. .| ..++-..+.++
T Consensus 154 ~a~~vlltG~SAGG~g~~~~~d~~~~~lp-~~~~v~~~~Ds 193 (361)
T PF03283_consen 154 NAKQVLLTGCSAGGLGAILHADYVRDRLP-SSVKVKCLSDS 193 (361)
T ss_pred ccceEEEeccChHHHHHHHHHHHHHHHhc-cCceEEEeccc
Confidence 45789999999999988876543 45 33444444444
No 295
>COG0218 Predicted GTPase [General function prediction only]
Probab=46.96 E-value=17 Score=26.50 Aligned_cols=22 Identities=23% Similarity=0.495 Sum_probs=16.1
Q ss_pred cCCCccEEEEEeCCCCCCchhh
Q 023794 197 LSCPVPKLLLLAGTDRLDRPLT 218 (277)
Q Consensus 197 ~~i~~P~l~i~g~~D~~~~~~~ 218 (277)
....+|++++.-.-|.+...+.
T Consensus 132 ~~~~i~~~vv~tK~DKi~~~~~ 153 (200)
T COG0218 132 LELGIPVIVVLTKADKLKKSER 153 (200)
T ss_pred HHcCCCeEEEEEccccCChhHH
Confidence 4556888999989998765443
No 296
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=46.53 E-value=49 Score=23.77 Aligned_cols=20 Identities=15% Similarity=0.154 Sum_probs=11.3
Q ss_pred CcHHHHHHHHHHHHHHHhcC
Q 023794 54 LSIETMCNDVLAVLKEMYGE 73 (277)
Q Consensus 54 ~~~~~~~~d~~~~l~~l~~~ 73 (277)
.+.+++.+-+..+++.++..
T Consensus 71 ~~~~~~~~~~~~fv~~iR~~ 90 (178)
T PF14606_consen 71 MSPEEFRERLDGFVKTIREA 90 (178)
T ss_dssp CCTTTHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 34555556666666666543
No 297
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=46.37 E-value=57 Score=23.87 Aligned_cols=61 Identities=13% Similarity=0.187 Sum_probs=32.7
Q ss_pred CCCeEEEEccCCCCcccH---HHHHHhhhh-cCeEEE--EcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 023794 5 EGPVIFCLHGGGYSGLSF---ALAAGKIKE-KARVVA--MDLRGHGKSSSENDIDLSIETMCNDVLAVLKEM 70 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~---~~~~~~l~~-~~~vi~--~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l 70 (277)
..+|++++||.....-.. ..+...|.+ +..+.. +.--|||.... ....+..+.+.++++..
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~-----~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP-----ENRRDWYERILDFFDKY 209 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH-----HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc-----hhHHHHHHHHHHHHHHH
Confidence 368999999976543322 345566655 544444 44445543321 12335555666666553
No 298
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=46.15 E-value=36 Score=23.66 Aligned_cols=19 Identities=32% Similarity=0.217 Sum_probs=16.4
Q ss_pred CcEEEEEeChhHHHHHHHH
Q 023794 76 PSIVLVGHSMGGSVAVHVA 94 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a 94 (277)
.--.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3457889999999999998
No 299
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=46.10 E-value=41 Score=26.71 Aligned_cols=21 Identities=29% Similarity=0.368 Sum_probs=17.9
Q ss_pred CCcEEEEEeChhHHHHHHHHH
Q 023794 75 PPSIVLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~ 95 (277)
.++..+.|||+|=+-|+..+.
T Consensus 84 ~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 84 VKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCceeecccHhHHHHHHHcc
Confidence 567899999999998887765
No 300
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=45.90 E-value=1.7e+02 Score=24.22 Aligned_cols=75 Identities=8% Similarity=-0.039 Sum_probs=36.6
Q ss_pred CeEEEEccCCCCc---ccHHHHHHhhhh-cCeEEEEcCCC--CCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 7 PVIFCLHGGGYSG---LSFALAAGKIKE-KARVVAMDLRG--HGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 7 p~vv~~HG~~~~~---~~~~~~~~~l~~-~~~vi~~d~~G--~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
.+||+++-..... .....-+..|.+ |+.|+-+..-- ||+... +...+.+++++.+...+..-.....+++.+
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~--g~~~~~~~i~~~v~~~~~~~~~~~~~~vli 190 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGK--GRLAEPETIVKAAEREFSPKEDLEGKRVLI 190 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccC--CCCCCHHHHHHHHHHHHhhccccCCceEEE
Confidence 3566666533221 123344455655 77666554322 243322 224467777777776664311112345666
Q ss_pred EEe
Q 023794 81 VGH 83 (277)
Q Consensus 81 vG~ 83 (277)
.|-
T Consensus 191 t~g 193 (390)
T TIGR00521 191 TAG 193 (390)
T ss_pred ecC
Confidence 665
No 301
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=45.88 E-value=34 Score=28.91 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChhHHHHH-HHHHHhcccccceEEEEccC
Q 023794 60 CNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAV-HVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 60 ~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~-~~a~~~p~~~v~~lvl~~~~ 111 (277)
.+.+++-+...++ +++++.|+|-|.|+.-.. ++.+=.....++..|+-++.
T Consensus 203 l~WV~~Ni~aFGG-np~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS 254 (601)
T KOG4389|consen 203 LQWVQENIAAFGG-NPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGS 254 (601)
T ss_pred HHHHHHhHHHhCC-CcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCC
Confidence 3456666666655 578999999999986433 22211111356666776654
No 302
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=44.28 E-value=39 Score=25.66 Aligned_cols=19 Identities=32% Similarity=0.305 Sum_probs=17.3
Q ss_pred EEEEeChhHHHHHHHHHHh
Q 023794 79 VLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~~ 97 (277)
.++|-|.|+.++..++...
T Consensus 34 ~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred EEEEEcHHHHHHHHHHhCC
Confidence 8999999999999999864
No 303
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=43.31 E-value=35 Score=24.21 Aligned_cols=22 Identities=27% Similarity=0.134 Sum_probs=17.1
Q ss_pred CcEEEEEeChhHHHHHHHHHHh
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
.--.+.|-|.||.+|+.++...
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-
T ss_pred CccEEEEcChhhhhHHHHHhCC
Confidence 3457999999999998888763
No 304
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=42.75 E-value=56 Score=23.82 Aligned_cols=45 Identities=16% Similarity=0.142 Sum_probs=37.8
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh
Q 023794 53 DLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 53 ~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
-+|++++.+....+.+.+...+.++=+++|-.-||++..++.+.+
T Consensus 6 ~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRGG~~pariLsd~ 50 (192)
T COG2236 6 YVSWEEIHRLCRALAEKIRASGFKPDVIVAIARGGLIPARILSDF 50 (192)
T ss_pred EecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCceehHHHHHHH
Confidence 357888888888888888766777789999999999999998876
No 305
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=42.64 E-value=1e+02 Score=26.98 Aligned_cols=102 Identities=16% Similarity=0.252 Sum_probs=54.2
Q ss_pred CCCeEEEEccCCCCcccHHHHHH--------hhhh-cCeEEEEcCCC----CCCCCCCCCCCCcHHHHHHHHHHHHHHHh
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAG--------KIKE-KARVVAMDLRG----HGKSSSENDIDLSIETMCNDVLAVLKEMY 71 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~--------~l~~-~~~vi~~d~~G----~G~S~~~~~~~~~~~~~~~d~~~~l~~l~ 71 (277)
..-+|=+--|.+-+......+.+ .+.+ |=.|..-..-| ||.-+.+. .-....-++++-..|..+-
T Consensus 257 ~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~--ekrTRvRaRvis~al~d~i 334 (655)
T COG3887 257 KNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPM--EKRTRVRARVISTALSDII 334 (655)
T ss_pred cCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchh--HHhHHHHHHHHHHHHHHHH
Confidence 34456666676655555443322 1223 34555543323 44332221 1122333444444444433
Q ss_pred cCCCCcEEEEEe------ChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 72 GEQPPSIVLVGH------SMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 72 ~~~~~~~~lvG~------S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
.. .++|+++|| +.|+.+++..-+..- .+ .+.++++|.
T Consensus 335 ~e-~d~VfImGHk~pDmDalGsAig~~~~A~~~-~~-~a~~v~dp~ 377 (655)
T COG3887 335 KE-SDNVFIMGHKFPDMDALGSAIGMQKFASMN-NK-EAFAVLDPE 377 (655)
T ss_pred hh-cCcEEEEccCCCChHHHHHHHHHHHHHHhc-cc-ccEEEECcc
Confidence 22 468999999 789999887666543 44 677777764
No 306
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=40.90 E-value=66 Score=20.73 Aligned_cols=77 Identities=19% Similarity=0.313 Sum_probs=42.2
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhc-CCCCcEEEEEe
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYG-EQPPSIVLVGH 83 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~-~~~~~~~lvG~ 83 (277)
..|+|+|.--+..-...-..+...+.-.+.|+-+|...+|. ++...+..+.+ .....+++-|.
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~----------------eiq~~l~~~tg~~tvP~vFI~Gk 76 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGS----------------EIQKALKKLTGQRTVPNVFIGGK 76 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcH----------------HHHHHHHHhcCCCCCCEEEECCE
Confidence 46777776633222222233333333367888888763331 33333333332 24567888899
Q ss_pred ChhHHHHHHHHHHh
Q 023794 84 SMGGSVAVHVAAKK 97 (277)
Q Consensus 84 S~Gg~ia~~~a~~~ 97 (277)
+.||.--+......
T Consensus 77 ~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 77 FIGGASDLMALHKS 90 (104)
T ss_pred EEcCHHHHHHHHHc
Confidence 99998766655543
No 307
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=40.43 E-value=27 Score=27.75 Aligned_cols=19 Identities=32% Similarity=0.469 Sum_probs=16.6
Q ss_pred EEEEeChhHHHHHHHHHHh
Q 023794 79 VLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~~ 97 (277)
.+.|.|.||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6889999999999999754
No 308
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=40.02 E-value=84 Score=24.70 Aligned_cols=25 Identities=24% Similarity=0.430 Sum_probs=22.5
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
++++|.++|.|.|=.+|.+.++.+.
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC
Confidence 6789999999999999999998864
No 309
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=39.10 E-value=1.6e+02 Score=22.02 Aligned_cols=36 Identities=8% Similarity=0.125 Sum_probs=23.4
Q ss_pred CCCeEEEEccCCCCccc--H-HHHHHhhhh-cCeEEEEcC
Q 023794 5 EGPVIFCLHGGGYSGLS--F-ALAAGKIKE-KARVVAMDL 40 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~--~-~~~~~~l~~-~~~vi~~d~ 40 (277)
.++.|.||+-.+.+... | +...+.|++ |..+..+++
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 36788888876665544 2 345566665 777777666
No 310
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=38.51 E-value=1.5e+02 Score=26.33 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=26.4
Q ss_pred CCCeEEEEccCCCCccc---HHHHHHhhhh-cCeEEEEcCC--CCCCCC
Q 023794 5 EGPVIFCLHGGGYSGLS---FALAAGKIKE-KARVVAMDLR--GHGKSS 47 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~---~~~~~~~l~~-~~~vi~~d~~--G~G~S~ 47 (277)
-+.++++|||.....-. -..+...|.. |..|-..=+| ||+.+.
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 35689999997654433 3356667765 6665555555 555554
No 311
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=38.43 E-value=1.8e+02 Score=24.30 Aligned_cols=80 Identities=21% Similarity=0.197 Sum_probs=48.2
Q ss_pred hhhcCeEEEEcCCCCCCCCCCC--CCCC---cHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccc
Q 023794 29 IKEKARVVAMDLRGHGKSSSEN--DIDL---SIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLH 103 (277)
Q Consensus 29 l~~~~~vi~~d~~G~G~S~~~~--~~~~---~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~ 103 (277)
...++-|+-.|..++-.--... .-.| .++.+.+++.. .........-+|.|---||.+++..+.+.|...+.
T Consensus 72 ~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr---~a~~g~yr~PVl~g~g~Gg~~A~asaaqSp~atla 148 (456)
T COG3946 72 LARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQR---AADLGVYRLPVLTGPGQGGTLAYASAAQSPDATLA 148 (456)
T ss_pred hhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHH---HhhccCcccceEeecCCCcHHHHHHHhhChhhhhc
Confidence 3448888888888763221111 1133 44444444433 33221233457889999999999999988756677
Q ss_pred eEEEEccC
Q 023794 104 GLVVVDVV 111 (277)
Q Consensus 104 ~lvl~~~~ 111 (277)
+.+-+++.
T Consensus 149 g~Vsldp~ 156 (456)
T COG3946 149 GAVSLDPT 156 (456)
T ss_pred CccCCCCC
Confidence 76666554
No 312
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=38.38 E-value=13 Score=31.16 Aligned_cols=39 Identities=26% Similarity=0.378 Sum_probs=27.2
Q ss_pred HHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceE
Q 023794 66 VLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGL 105 (277)
Q Consensus 66 ~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~l 105 (277)
+++.|...+.-|=++.|-|+||.+|..++.+.- +.++++
T Consensus 192 VlrtL~e~dLlP~IIsGsS~GaivAsl~~v~~~-eEl~~L 230 (543)
T KOG2214|consen 192 VLRTLLEQDLLPNIISGSSAGAIVASLVGVRSN-EELKQL 230 (543)
T ss_pred HHHHHHHccccchhhcCCchhHHHHHHHhhcch-HHHHHH
Confidence 344443335545689999999999999998765 445544
No 313
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.36 E-value=52 Score=25.17 Aligned_cols=21 Identities=19% Similarity=0.172 Sum_probs=17.8
Q ss_pred EEEEEeChhHHHHHHHHHHhc
Q 023794 78 IVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p 98 (277)
-.+.|-|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468999999999999987654
No 314
>PLN02748 tRNA dimethylallyltransferase
Probab=38.18 E-value=2.2e+02 Score=24.30 Aligned_cols=76 Identities=14% Similarity=0.229 Sum_probs=46.6
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhh--cCeEEEEcC----CCC--CCCC----------------CCCCCCCcHHHHHH
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKE--KARVVAMDL----RGH--GKSS----------------SENDIDLSIETMCN 61 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~----~G~--G~S~----------------~~~~~~~~~~~~~~ 61 (277)
++.+|+|-|-.++...- ++..|++ +..||..|- +|. |... ..+...|+..++.+
T Consensus 21 ~~~~i~i~GptgsGKs~--la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F~~ 98 (468)
T PLN02748 21 KAKVVVVMGPTGSGKSK--LAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDFRD 98 (468)
T ss_pred CCCEEEEECCCCCCHHH--HHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHHHH
Confidence 35588888866655442 2333333 456777772 332 1111 12234699999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeC
Q 023794 62 DVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 62 d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
+....|+.+...+. -.+|||-|
T Consensus 99 ~A~~~I~~I~~rgk-~PIlVGGT 120 (468)
T PLN02748 99 HAVPLIEEILSRNG-LPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHhcCC-CeEEEcCh
Confidence 99999999876543 35777755
No 315
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=38.14 E-value=51 Score=25.10 Aligned_cols=20 Identities=20% Similarity=0.222 Sum_probs=17.3
Q ss_pred EEEEeChhHHHHHHHHHHhc
Q 023794 79 VLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~~p 98 (277)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987643
No 316
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=37.95 E-value=1.3e+02 Score=21.00 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=25.2
Q ss_pred cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhH
Q 023794 32 KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGG 87 (277)
Q Consensus 32 ~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg 87 (277)
+-.||++|-+| ...+-.++++.+.+..+. +.+-++++|-+.|=
T Consensus 65 ~~~~i~LDe~G---------k~~sS~~fA~~l~~~~~~----g~~i~FvIGGa~G~ 107 (153)
T TIGR00246 65 KAHVVTLDIPG---------KPWTTPQLADTLEKWKTD----GRDVTLLIGGPEGL 107 (153)
T ss_pred CCeEEEEcCCC---------CcCCHHHHHHHHHHHhcc----CCeEEEEEcCCCcC
Confidence 34678888875 245666666666554322 22235677777763
No 317
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=37.86 E-value=49 Score=25.35 Aligned_cols=21 Identities=19% Similarity=0.194 Sum_probs=17.7
Q ss_pred EEEEEeChhHHHHHHHHHHhc
Q 023794 78 IVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 78 ~~lvG~S~Gg~ia~~~a~~~p 98 (277)
-.++|-|.|+.++..++...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 369999999999999987543
No 318
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=37.78 E-value=1.8e+02 Score=22.75 Aligned_cols=76 Identities=24% Similarity=0.137 Sum_probs=36.1
Q ss_pred EEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhH----HHHHHHHHHhcccccceEEEEcc
Q 023794 35 VVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGG----SVAVHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 35 vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg----~ia~~~a~~~p~~~v~~lvl~~~ 110 (277)
|..-+++|||....... ..+..+++.+-++.......=..++-|+=-.+ .++-.+.+..- ..-+.+++++|
T Consensus 37 V~fSnHtgyg~~~g~v~----~~e~l~~~l~~l~~~~~~~~~davltGYlgs~~qv~~i~~~v~~vk~-~~P~~~~l~DP 111 (281)
T COG2240 37 VQFSNHTGYGKWTGIVM----PPEQLADLLNGLEAIDKLGECDAVLTGYLGSAEQVRAIAGIVKAVKE-ANPNALYLCDP 111 (281)
T ss_pred EEecCCCCCCCCCCcCC----CHHHHHHHHHHHHhcccccccCEEEEccCCCHHHHHHHHHHHHHHhc-cCCCeEEEeCC
Confidence 44557899998654432 22222233332332111111246777763222 22222222222 44568899999
Q ss_pred CCCcc
Q 023794 111 VEGTA 115 (277)
Q Consensus 111 ~~~~~ 115 (277)
.-+..
T Consensus 112 VMGD~ 116 (281)
T COG2240 112 VMGDP 116 (281)
T ss_pred cccCC
Confidence 75443
No 319
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=37.77 E-value=1.8e+02 Score=22.06 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=24.8
Q ss_pred CCCeEEEEccCCCC--cccH-HHHHHhhhh-cCeEEEEcCC
Q 023794 5 EGPVIFCLHGGGYS--GLSF-ALAAGKIKE-KARVVAMDLR 41 (277)
Q Consensus 5 ~~p~vv~~HG~~~~--~~~~-~~~~~~l~~-~~~vi~~d~~ 41 (277)
.+|.|+||+=.+.. ...| +.+.+.+.+ |+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 46889999986633 2333 345566666 8888888765
No 320
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=37.65 E-value=1.9e+02 Score=22.43 Aligned_cols=62 Identities=27% Similarity=0.288 Sum_probs=36.1
Q ss_pred EccCCCCc-ccHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 023794 12 LHGGGYSG-LSFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 12 ~HG~~~~~-~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
+=|.+|++ ..--.++..+. ++.++-++.. ..|+..++-+|+..++...+..+.+-+.++-.+
T Consensus 36 LvG~~GsGr~sl~rLaa~i~-~~~~~~i~~~----------~~y~~~~f~~dLk~~~~~ag~~~~~~vfll~d~ 98 (268)
T PF12780_consen 36 LVGVGGSGRQSLARLAAFIC-GYEVFQIEIT----------KGYSIKDFKEDLKKALQKAGIKGKPTVFLLTDS 98 (268)
T ss_dssp EECTTTSCHHHHHHHHHHHT-TEEEE-TTTS----------TTTHHHHHHHHHHHHHHHHHCS-S-EEEEEECC
T ss_pred EecCCCccHHHHHHHHHHHh-ccceEEEEee----------CCcCHHHHHHHHHHHHHHHhccCCCeEEEecCc
Confidence 33444433 33344444443 5777666542 368999999999999988865543344455544
No 321
>PLN02840 tRNA dimethylallyltransferase
Probab=37.27 E-value=2.2e+02 Score=23.97 Aligned_cols=76 Identities=16% Similarity=0.272 Sum_probs=44.6
Q ss_pred CCeEEEEccCCCCcccH--HHHHHhhhhcCeEEEEcC----CCC--CCCCC----------------CCCCCCcHHHHHH
Q 023794 6 GPVIFCLHGGGYSGLSF--ALAAGKIKEKARVVAMDL----RGH--GKSSS----------------ENDIDLSIETMCN 61 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~--~~~~~~l~~~~~vi~~d~----~G~--G~S~~----------------~~~~~~~~~~~~~ 61 (277)
...+|+|-|..++...- ..++..+ +..++..|- +|. |...+ .+...|+..++.+
T Consensus 20 ~~~vi~I~GptgsGKTtla~~La~~~--~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F~~ 97 (421)
T PLN02840 20 KEKVIVISGPTGAGKSRLALELAKRL--NGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAFFD 97 (421)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHC--CCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHHHH
Confidence 35578888866554432 2333333 345676664 232 11111 1224689999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeC
Q 023794 62 DVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 62 d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
+....++.+...+. ..+|||-+
T Consensus 98 ~A~~~I~~i~~rgk-iPIvVGGT 119 (421)
T PLN02840 98 DARRATQDILNRGR-VPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHhcCC-CEEEEcCc
Confidence 99999998876553 34677654
No 322
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.91 E-value=54 Score=24.97 Aligned_cols=17 Identities=29% Similarity=0.343 Sum_probs=15.7
Q ss_pred EEEEeChhHHHHHHHHH
Q 023794 79 VLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~ 95 (277)
.+.|-|.|+.+|..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999984
No 323
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=34.76 E-value=85 Score=22.00 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=23.8
Q ss_pred CCeEEEEccCCCCcccH--HHHHHhhhh-cCeEEEEcC
Q 023794 6 GPVIFCLHGGGYSGLSF--ALAAGKIKE-KARVVAMDL 40 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~--~~~~~~l~~-~~~vi~~d~ 40 (277)
++.+|++-|.+++...- ..+...|.+ ++.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 46899999998877652 345555654 899999973
No 324
>PHA02114 hypothetical protein
Probab=34.53 E-value=71 Score=20.12 Aligned_cols=32 Identities=19% Similarity=0.115 Sum_probs=20.8
Q ss_pred eEEEEccCCCCcccHHHHHHhhhh-cCeEEEEc
Q 023794 8 VIFCLHGGGYSGLSFALAAGKIKE-KARVVAMD 39 (277)
Q Consensus 8 ~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d 39 (277)
+||+=-.+..+..-|-.++..|.+ ||.|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 445544566666777777777766 77777643
No 325
>COG5389 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.03 E-value=1e+02 Score=21.39 Aligned_cols=68 Identities=13% Similarity=0.249 Sum_probs=42.6
Q ss_pred HHHhhhhhhhcCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCCCCcccccChHHHHHHHHHHHHhcCC
Q 023794 187 AWYEGLSEKFLSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHTGHAIQEDAPEEFASLILNFIARNRI 259 (277)
Q Consensus 187 ~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 259 (277)
+|.+-.-..+...+-|.-++|+..+.-. ..+.|.+-.+-.+|+--.+...+.-++...|..||.....
T Consensus 53 sW~eIaG~~la~~trPerI~wpRr~~~e-----g~~~pgvL~iaceG~~Al~lqH~~geii~RvngflGf~ai 120 (181)
T COG5389 53 SWEEIAGDTLADRTRPERIIWPRRGREE-----GPFQPGVLVIACEGAAALFLQHETGEIIARVNGFLGFGAI 120 (181)
T ss_pred HHHHHhchhhhhcCCcceecccccCccc-----CCCCCceEEEEeccHHHHHhhhhhhHHHHHHHhhhccccc
Confidence 3444444566788889999999886211 1233565566666644333333446788899999977543
No 326
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=33.80 E-value=1.9e+02 Score=23.50 Aligned_cols=72 Identities=14% Similarity=0.021 Sum_probs=42.1
Q ss_pred EEEEccCCCCcccHHHHHHhhhh---cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 9 IFCLHGGGYSGLSFALAAGKIKE---KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 9 vv~~HG~~~~~~~~~~~~~~l~~---~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
+++|+|...+...-..+++.+.. ..+++-++..| .+.-.+ .+ ++..+.+.+.+... +. -+.+..|.
T Consensus 260 y~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~--~~~~~~---ps-~e~i~~f~~~L~~~---Gi--~vtvR~~~ 328 (345)
T PRK14457 260 YILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPID--EVEFQR---PS-PKRIQAFQRVLEQR---GV--AVSVRASR 328 (345)
T ss_pred EEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCC--CCCCCC---CC-HHHHHHHHHHHHHC---CC--eEEEeCCC
Confidence 67899999998888888877764 34445554433 222111 12 23334444444443 54 35788999
Q ss_pred hHHHHH
Q 023794 86 GGSVAV 91 (277)
Q Consensus 86 Gg~ia~ 91 (277)
|.=|..
T Consensus 329 G~di~a 334 (345)
T PRK14457 329 GLDANA 334 (345)
T ss_pred CCchhh
Confidence 865543
No 327
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=33.59 E-value=1.8e+02 Score=20.94 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=42.6
Q ss_pred CeEEEEccCCCCcccHH----HHHHhhhh---cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEE
Q 023794 7 PVIFCLHGGGYSGLSFA----LAAGKIKE---KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIV 79 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~----~~~~~l~~---~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 79 (277)
..+++--|...+...+. .++..+.+ ...++++...++.............++.-+.+.+.++.+...+.+.++
T Consensus 61 ~~~~ld~~~N~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~~l~~~g~~nl~ 140 (178)
T PF14606_consen 61 DLIVLDCGPNMSPEEFRERLDGFVKTIREAHPDTPILLVSPIPYPAGYFDNSRGETVEEFREALREAVEQLRKEGDKNLY 140 (178)
T ss_dssp SEEEEEESHHCCTTTHHHHHHHHHHHHHTT-SSS-EEEEE----TTTTS--TTS--HHHHHHHHHHHHHHHHHTT-TTEE
T ss_pred CEEEEEeecCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEecCCccccccCchHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 34555555445555554 34455544 467888887776655444434567888888888888888766777788
Q ss_pred EE
Q 023794 80 LV 81 (277)
Q Consensus 80 lv 81 (277)
++
T Consensus 141 ~l 142 (178)
T PF14606_consen 141 YL 142 (178)
T ss_dssp EE
T ss_pred Ee
Confidence 77
No 328
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=33.30 E-value=85 Score=25.96 Aligned_cols=31 Identities=23% Similarity=0.374 Sum_probs=27.6
Q ss_pred CcEEEEEeChhHHHHHHHHHHhcccccceEEE
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVV 107 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl 107 (277)
.+++++|.+.||+-.=..+.++| +.|..+.+
T Consensus 119 g~~v~~~s~~GGv~iEe~~~~~p-~~i~~~~i 149 (392)
T PRK14046 119 ERVRVIASARGGMEIEEIAAKEP-EAIIQVVV 149 (392)
T ss_pred CcEEEEEeCCCCCchHHHhhhCh-hheEEEEc
Confidence 47889999999999999999999 88888776
No 329
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=33.28 E-value=2.9e+02 Score=23.08 Aligned_cols=71 Identities=6% Similarity=0.057 Sum_probs=36.7
Q ss_pred CeEEEEccCCCCcccH-----HHHHHhhhh-cCeEEEEcCCC---CCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Q 023794 7 PVIFCLHGGGYSGLSF-----ALAAGKIKE-KARVVAMDLRG---HGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPS 77 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~-----~~~~~~l~~-~~~vi~~d~~G---~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 77 (277)
.+||+++-. +..+| ..-+..|.+ |+.|+-++. | +|.... +.-...++.+..+...+..- ....++
T Consensus 117 ~pvvi~Pam--n~~m~~~p~~~~Nl~~L~~~G~~ii~P~~-g~la~~~~g~--gr~~~~~~I~~~~~~~~~~~-~l~gk~ 190 (399)
T PRK05579 117 APVLVAPAM--NTQMWENPATQRNLATLRSRGVEIIGPAS-GRLACGDVGP--GRMAEPEEIVAAAERALSPK-DLAGKR 190 (399)
T ss_pred CCEEEEeCC--ChhHcCCHHHHHHHHHHHHCCCEEECCCC-ccccCCCcCC--CCCCCHHHHHHHHHHHhhhc-ccCCCE
Confidence 456666654 33343 334455655 888775543 3 333322 22346777777776666431 112345
Q ss_pred EEEEEe
Q 023794 78 IVLVGH 83 (277)
Q Consensus 78 ~~lvG~ 83 (277)
+.+-|-
T Consensus 191 vlITgG 196 (399)
T PRK05579 191 VLITAG 196 (399)
T ss_pred EEEeCC
Confidence 666666
No 330
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=32.96 E-value=1.3e+02 Score=23.51 Aligned_cols=49 Identities=16% Similarity=0.226 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEE
Q 023794 57 ETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVV 107 (277)
Q Consensus 57 ~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl 107 (277)
+....-+..+++.+.-.+-..+-=+|..||++ +..+|.++. ..|-|+.+
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l-~~~aA~~y~-v~V~GvTl 103 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGL-AIYAAEEYG-VTVVGVTL 103 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHH-HHHHHHHcC-CEEEEeeC
Confidence 33444556666666444335677789999987 556666665 67777776
No 331
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=32.32 E-value=1.4e+02 Score=19.21 Aligned_cols=72 Identities=21% Similarity=0.247 Sum_probs=37.0
Q ss_pred EEEEccCCCCcccHHHHHHhhhh--cCeEEEEcC--CCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcC-CCCcEEEEE
Q 023794 9 IFCLHGGGYSGLSFALAAGKIKE--KARVVAMDL--RGHGKSSSENDIDLSIETMCNDVLAVLKEMYGE-QPPSIVLVG 82 (277)
Q Consensus 9 vv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~--~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~~lvG 82 (277)
+|+|.|.+++.... ++..|++ ++.++..|- +-.+......+.........+.+.+.++.+... ....+++-|
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~g 77 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQLQNKPDNDNWIIDG 77 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHHHHETTT--EEEEEC
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHhhhccCCCCeEEEeC
Confidence 68899987776654 3444444 799999988 544444222211111233344455555555221 122355555
No 332
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=31.39 E-value=2.3e+02 Score=22.59 Aligned_cols=73 Identities=19% Similarity=0.306 Sum_probs=41.5
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhh--cCeEEEEcCC----C--CCCCC----------------CCCCCCCcHHHHHH
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKE--KARVVAMDLR----G--HGKSS----------------SENDIDLSIETMCN 61 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~~----G--~G~S~----------------~~~~~~~~~~~~~~ 61 (277)
.+.+|++-|-.++...- ++..|++ +..++..|-. | +|... ..+...++..++.+
T Consensus 3 ~~~~i~i~GptgsGKt~--la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 3 KPKVIVIVGPTASGKTA--LAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred CceEEEEECCCCcCHHH--HHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 45688888876665432 3333333 4566766653 1 11111 11123578889999
Q ss_pred HHHHHHHHHhcCCCCcEEEE
Q 023794 62 DVLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 62 d~~~~l~~l~~~~~~~~~lv 81 (277)
+....++.+...+. ..+++
T Consensus 81 ~a~~~i~~i~~~gk-~pIlv 99 (307)
T PRK00091 81 DALAAIADILARGK-LPILV 99 (307)
T ss_pred HHHHHHHHHHhCCC-CEEEE
Confidence 99999887755443 34555
No 333
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=31.29 E-value=69 Score=23.09 Aligned_cols=30 Identities=17% Similarity=0.262 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHH
Q 023794 61 NDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHV 93 (277)
Q Consensus 61 ~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~ 93 (277)
..+.-.+..| +.+.++++|||--|++...+
T Consensus 69 asleyAv~~L---~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 69 SVLQYAVDVL---KVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhHHHHHHhc---CCCEEEEecCCCchHHHHHH
Confidence 4445555667 77789999999888876644
No 334
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.11 E-value=86 Score=24.53 Aligned_cols=19 Identities=26% Similarity=0.392 Sum_probs=16.5
Q ss_pred EEEEeChhHHHHHHHHHHh
Q 023794 79 VLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~~ 97 (277)
.++|-|.||.+|..++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6889999999999998643
No 335
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=31.00 E-value=2.6e+02 Score=21.82 Aligned_cols=65 Identities=14% Similarity=0.272 Sum_probs=41.7
Q ss_pred cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEE-eChhHHHHHHHHHHhcccccceEEEE
Q 023794 32 KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVG-HSMGGSVAVHVAAKKTLRSLHGLVVV 108 (277)
Q Consensus 32 ~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG-~S~Gg~ia~~~a~~~p~~~v~~lvl~ 108 (277)
++.++.+|-+|....+ .+..+.+.++++.. .+..++|+- -++++.-+...+..+..-.+.++|+-
T Consensus 154 ~~D~ViIDt~Gr~~~~---------~~~l~el~~~~~~~---~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 154 RVDYILIDTAGKNYRA---------SETVEEMIETMGQV---EPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred CCCEEEEECCCCCcCC---------HHHHHHHHHHHhhh---CCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 6899999999864221 23344455555544 344456554 56788888888887653568888874
No 336
>PLN03006 carbonate dehydratase
Probab=29.44 E-value=76 Score=25.05 Aligned_cols=31 Identities=16% Similarity=0.307 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHH
Q 023794 60 CNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHV 93 (277)
Q Consensus 60 ~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~ 93 (277)
..-|.-.+..| +.+.++++|||--|++...+
T Consensus 159 ~aSLEYAV~~L---~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 159 KAALEFSVNTL---NVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhHHHHHHHh---CCCEEEEecCCCchHHHHHh
Confidence 34556666777 77889999999888776433
No 337
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=29.38 E-value=1.4e+02 Score=24.01 Aligned_cols=77 Identities=18% Similarity=0.199 Sum_probs=42.8
Q ss_pred EEEccCCCCcccHHHHHHhhhhc---CeEEEEc--CCCCCCCC-----------CCCCCCCcHHHHHHHHHHHHHHHhcC
Q 023794 10 FCLHGGGYSGLSFALAAGKIKEK---ARVVAMD--LRGHGKSS-----------SENDIDLSIETMCNDVLAVLKEMYGE 73 (277)
Q Consensus 10 v~~HG~~~~~~~~~~~~~~l~~~---~~vi~~d--~~G~G~S~-----------~~~~~~~~~~~~~~d~~~~l~~l~~~ 73 (277)
|+++|+|+-......++..+-.. ..|++++ .|+..--+ ......-+..+.++.+.+.++..
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~--- 133 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESR--- 133 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhcc---
Confidence 67888888877777777665544 7777776 33221100 00011223344444444444433
Q ss_pred C-CCcEEEEEeChhHHH
Q 023794 74 Q-PPSIVLVGHSMGGSV 89 (277)
Q Consensus 74 ~-~~~~~lvG~S~Gg~i 89 (277)
. ..+++|+=|+.=|..
T Consensus 134 ~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 134 PSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CCCCceEEEEECCCChh
Confidence 2 457889989887665
No 338
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=29.19 E-value=1.3e+02 Score=23.16 Aligned_cols=54 Identities=20% Similarity=0.206 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHH-HHHHHHHhcccccceEEEEccCC
Q 023794 57 ETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSV-AVHVAAKKTLRSLHGLVVVDVVE 112 (277)
Q Consensus 57 ~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~i-a~~~a~~~p~~~v~~lvl~~~~~ 112 (277)
+.+.+|..+++......+...++++|.+....- ++.+|..+| .+-..+-+-|..
T Consensus 13 ~~~~~d~~~vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~--~v~~~~G~HP~~ 67 (256)
T COG0084 13 EEFDEDRDEVIARAREAGVKKMVVVGTDLEDFKRALELAEKYP--NVYAAVGVHPLD 67 (256)
T ss_pred hhhcCCHHHHHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCC--CeEEEEeeCCCc
Confidence 455667777777776667788999999999888 888888887 455555555543
No 339
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=28.64 E-value=51 Score=26.08 Aligned_cols=17 Identities=24% Similarity=0.329 Sum_probs=15.4
Q ss_pred EEEEeChhHHHHHHHHH
Q 023794 79 VLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~ 95 (277)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58899999999999886
No 340
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=27.77 E-value=1.5e+02 Score=24.73 Aligned_cols=57 Identities=12% Similarity=0.179 Sum_probs=37.8
Q ss_pred cEEEEEeCCCCCCchhhhhhhcCCccEEEeCCCCCccc-----ccChHHH-------HHHHHHHHHhcC
Q 023794 202 PKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHTGHAIQ-----EDAPEEF-------ASLILNFIARNR 258 (277)
Q Consensus 202 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~-----~e~p~~~-------~~~i~~fl~~~~ 258 (277)
-+++-+|.-|++..--..+.....+-.++++++.|..- -++|+.| .++|..|+++..
T Consensus 417 NiIFSNG~LDPWSGGGV~~nis~svvav~~k~GAHHlDLR~~~~~DP~~v~~aR~~Ei~iI~~WI~~~~ 485 (492)
T KOG2183|consen 417 NIIFSNGLLDPWSGGGVLKNISDSVVAVTIKEGAHHLDLRASHPEDPESVVEARELEIQIIKKWIKEFY 485 (492)
T ss_pred ceeeeCCCcCCccCcCeeccccCcEEEEEecCCccceeccCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 44666777888765555555555566677888888663 4566655 467888887654
No 341
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=27.66 E-value=1e+02 Score=23.87 Aligned_cols=69 Identities=12% Similarity=0.122 Sum_probs=43.8
Q ss_pred CCCeEEEEccCCCCcc--cHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHH-HHHHHHHHHhcCCCCcEEE
Q 023794 5 EGPVIFCLHGGGYSGL--SFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCN-DVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~--~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~-d~~~~l~~l~~~~~~~~~l 80 (277)
..|+||++.|+-+++. .-+.+...|.. +++|.++..| +-++... -+-.+-..+... ..+.+
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P-------------t~eE~~~p~lWRfw~~lP~~--G~i~I 118 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP-------------SAEELDHDFLWRIHKALPER--GEIGI 118 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC-------------CHHHHcCchHHHHHHhCCCC--CeEEE
Confidence 4599999999866544 45677777754 8999998665 1222222 245566666433 35777
Q ss_pred EEeChhHH
Q 023794 81 VGHSMGGS 88 (277)
Q Consensus 81 vG~S~Gg~ 88 (277)
+=-||=+-
T Consensus 119 F~RSWY~~ 126 (264)
T TIGR03709 119 FNRSHYED 126 (264)
T ss_pred EcCccccc
Confidence 77776443
No 342
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=27.49 E-value=1.6e+02 Score=20.54 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=47.6
Q ss_pred CeEEEEccCCCCcccHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 023794 7 PVIFCLHGGGYSGLSFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM 85 (277)
Q Consensus 7 p~vv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~ 85 (277)
|.|..+-|..++....+.....|.+ | +.+|.+= .+.....+.+.++++.+...+. ++++.+-.+
T Consensus 1 p~V~Ii~gs~SD~~~~~~a~~~L~~~g---i~~~~~V-----------~saHR~p~~l~~~~~~~~~~~~-~viIa~AG~ 65 (150)
T PF00731_consen 1 PKVAIIMGSTSDLPIAEEAAKTLEEFG---IPYEVRV-----------ASAHRTPERLLEFVKEYEARGA-DVIIAVAGM 65 (150)
T ss_dssp -EEEEEESSGGGHHHHHHHHHHHHHTT----EEEEEE-------------TTTSHHHHHHHHHHTTTTTE-SEEEEEEES
T ss_pred CeEEEEeCCHHHHHHHHHHHHHHHHcC---CCEEEEE-----------EeccCCHHHHHHHHHHhccCCC-EEEEEECCC
Confidence 5677888877777777777777766 4 3344431 1122223456677776644333 488888888
Q ss_pred hHHHHHHHHHHhcccccceE
Q 023794 86 GGSVAVHVAAKKTLRSLHGL 105 (277)
Q Consensus 86 Gg~ia~~~a~~~p~~~v~~l 105 (277)
-+.+.--+|..-+ ..|-++
T Consensus 66 ~a~Lpgvva~~t~-~PVIgv 84 (150)
T PF00731_consen 66 SAALPGVVASLTT-LPVIGV 84 (150)
T ss_dssp S--HHHHHHHHSS-S-EEEE
T ss_pred cccchhhheeccC-CCEEEe
Confidence 8888888877643 334444
No 343
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=27.18 E-value=3.3e+02 Score=21.84 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=39.9
Q ss_pred eEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeCh-hHHHHHHHHHHhcccccceEEEE
Q 023794 34 RVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSM-GGSVAVHVAAKKTLRSLHGLVVV 108 (277)
Q Consensus 34 ~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~-Gg~ia~~~a~~~p~~~v~~lvl~ 108 (277)
.|+..|.+. ..|+.+.+++.+.++++.. ++..++|+|+|. |--++-++|.+.-...+.-++-+
T Consensus 51 ~V~~~~~~~---------~~~~~e~~~~al~~~i~~~---~p~~~vl~~~T~~Gr~laprlAa~l~~gl~~D~~~l 114 (313)
T PRK03363 51 HVWKLSGKP---------DDRMIEDYAGVMADTIRQH---GADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTV 114 (313)
T ss_pred EEEEecCcc---------cccChHHHHHHHHHHHHhh---CCCcEEEEcCCccHHHHHHHHHHHhCCCcccceEEE
Confidence 566666541 1367788888888888876 443478888765 66677777776432334434333
No 344
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=26.76 E-value=1.1e+02 Score=23.14 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=45.2
Q ss_pred CCCeEEEEccCCCCcc--cHHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHH-HHHHHHHHhcCCCCcEEE
Q 023794 5 EGPVIFCLHGGGYSGL--SFALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCND-VLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~--~~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~~~~l 80 (277)
+.|+||++.|+-+++. .-..+...|.. +++|.++..| +-++...+ +-.+-..+... .++.+
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p-------------t~eE~~~p~lwRfw~~lP~~--G~i~I 93 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP-------------SDRERTQWYFQRYVQHLPAA--GEIVL 93 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC-------------CHHHHcChHHHHHHHhCCCC--CeEEE
Confidence 4699999999866544 45677777754 8999988776 22232333 45666666433 35788
Q ss_pred EEeChhHHH
Q 023794 81 VGHSMGGSV 89 (277)
Q Consensus 81 vG~S~Gg~i 89 (277)
+--||=+-+
T Consensus 94 F~rSwY~~~ 102 (230)
T TIGR03707 94 FDRSWYNRA 102 (230)
T ss_pred EeCchhhhH
Confidence 877765543
No 345
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.63 E-value=63 Score=26.13 Aligned_cols=18 Identities=28% Similarity=0.357 Sum_probs=15.9
Q ss_pred EEEEeChhHHHHHHHHHH
Q 023794 79 VLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~ 96 (277)
.+.|-|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 688999999999999864
No 346
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=26.14 E-value=2.4e+02 Score=21.97 Aligned_cols=58 Identities=19% Similarity=0.171 Sum_probs=37.9
Q ss_pred cCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCC-CCcc-cccChHHHHHHHHHHHHhc
Q 023794 197 LSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHT-GHAI-QEDAPEEFASLILNFIARN 257 (277)
Q Consensus 197 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-gH~~-~~e~p~~~~~~i~~fl~~~ 257 (277)
....+|++++.|++ . -..+.+++.|+++.+.++.+ |.+. -.-.|++..+.|.+=.++.
T Consensus 144 g~~gVPV~lVsGDd-~--~~~ea~~~~p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~~A 203 (266)
T cd08663 144 GEYGVPVVLVTGDD-A--ACAEARELGPGVETVAVKEAIGRFAARCLPPAEARALIREAAAEA 203 (266)
T ss_pred hhcCCCEEEEecCH-H--HHHHHHhhCCCcEEEEEecccCCCccccCCHHHHHHHHHHHHHHH
Confidence 46689998888764 2 22445668899988887653 5333 3446677777777766443
No 347
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=26.08 E-value=1.9e+02 Score=22.49 Aligned_cols=58 Identities=16% Similarity=0.109 Sum_probs=38.5
Q ss_pred cCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCC-CCcccccChHHHHHHHHHHHHhc
Q 023794 197 LSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHT-GHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 197 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
....+|++++.|++- + ....+++.|+++.+.++.+ |.....-.|++..+.|.+=.++.
T Consensus 144 g~~gVPV~lvsGD~~-~--~~ea~~~~P~~~tv~vK~~~g~aa~~~~p~~a~~~I~~~~~~A 202 (263)
T cd08770 144 AYLGVPVVFVSGDAG-L--CAEAKELNPNIVTVPVKEGFGGATISIHPGLACKEIRKGVKKA 202 (263)
T ss_pred hhcCCCEEEEecCHH-H--HHHHHHhCCCceEEEeeeeeccccccCCHHHHHHHHHHHHHHH
Confidence 566899988887652 2 2445677899988887653 53333346788887777776544
No 348
>COG4425 Predicted membrane protein [Function unknown]
Probab=26.05 E-value=74 Score=26.70 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHH
Q 023794 56 IETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVH 92 (277)
Q Consensus 56 ~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~ 92 (277)
-+.+-+++...++.|....-.|.+|.|-|+|++=...
T Consensus 377 a~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 377 ARALFEAVYGYWTQLPKSSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred HHHHHHHHHHHHHhCCcCCCCceEEeccccccccCcc
Confidence 3445556666666665544568999999999886544
No 349
>PRK07877 hypothetical protein; Provisional
Probab=25.88 E-value=1.9e+02 Score=26.34 Aligned_cols=35 Identities=29% Similarity=0.252 Sum_probs=27.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
...+|.++|-+.|+.++..+|.. .-+..+++++.-
T Consensus 106 ~~~~V~IvG~GlGs~~a~~Lara---GvvG~l~lvD~D 140 (722)
T PRK07877 106 GRLRIGVVGLSVGHAIAHTLAAE---GLCGELRLADFD 140 (722)
T ss_pred hcCCEEEEEecHHHHHHHHHHHc---cCCCeEEEEcCC
Confidence 34579999999999998888864 224889998864
No 350
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=25.85 E-value=2.4e+02 Score=23.44 Aligned_cols=18 Identities=17% Similarity=0.309 Sum_probs=15.8
Q ss_pred cCeEEEEcCCCCCCCCCC
Q 023794 32 KARVVAMDLRGHGKSSSE 49 (277)
Q Consensus 32 ~~~vi~~d~~G~G~S~~~ 49 (277)
.|.||.+|.|.++.|...
T Consensus 290 ~fDlIilDPPsF~r~k~~ 307 (393)
T COG1092 290 KFDLIILDPPSFARSKKQ 307 (393)
T ss_pred cccEEEECCcccccCccc
Confidence 699999999999988654
No 351
>PRK04148 hypothetical protein; Provisional
Probab=25.83 E-value=1.4e+02 Score=20.40 Aligned_cols=21 Identities=24% Similarity=0.151 Sum_probs=17.3
Q ss_pred CcEEEEEeChhHHHHHHHHHH
Q 023794 76 PSIVLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~ 96 (277)
.++..+|-..|..+|..++..
T Consensus 18 ~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC
Confidence 579999999888888888743
No 352
>PF04422 FrhB_FdhB_N: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; InterPro: IPR007516 Coenzyme F420 hydrogenase (1.12.99.1 from EC) reduces the low-potential two-electron acceptor coenzyme F420. This entry contains the N termini of F420 hydrogenase and dehydrogenase beta subunits [, ]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (1.2.1.2 from EC, P06130 from SWISSPROT) is also represented in this entry []. This region is often found in association with the 4Fe-4S binding domain, fer4 (IPR001450 from INTERPRO), and the C terminus IPR007525 from INTERPRO.
Probab=25.71 E-value=1.1e+02 Score=18.53 Aligned_cols=32 Identities=25% Similarity=0.234 Sum_probs=22.2
Q ss_pred EEEEeChhHHHHHHHHHHhcccccceEEEEcc
Q 023794 79 VLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~ 110 (277)
+...-|.||++...+...--.+.|.++|.+..
T Consensus 13 ir~~~~sGG~vTaLl~~lLe~g~Vd~vv~~~~ 44 (82)
T PF04422_consen 13 IREKSQSGGVVTALLAYLLESGLVDGVVVVGR 44 (82)
T ss_pred hcccCCcHHHHHHHHHHHHHcCCceEEEEEee
Confidence 45566778888766655433378999998874
No 353
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=25.65 E-value=1.2e+02 Score=20.07 Aligned_cols=29 Identities=17% Similarity=0.285 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChhHHHHH
Q 023794 60 CNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAV 91 (277)
Q Consensus 60 ~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~ 91 (277)
...+.-.+..+ +.+.++++||+--|++..
T Consensus 46 ~~sl~~av~~l---~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 46 LASLEYAVEVL---GVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred HHHHHHHHHhh---CCCEEEEEccCCCcHHHH
Confidence 34455556666 777899999987776654
No 354
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=25.61 E-value=87 Score=18.45 Aligned_cols=10 Identities=40% Similarity=0.909 Sum_probs=5.2
Q ss_pred CeEEEEccCC
Q 023794 7 PVIFCLHGGG 16 (277)
Q Consensus 7 p~vv~~HG~~ 16 (277)
|.++++||..
T Consensus 32 ~~~~lvhGga 41 (71)
T PF10686_consen 32 PDMVLVHGGA 41 (71)
T ss_pred CCEEEEECCC
Confidence 4455566544
No 355
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=25.55 E-value=2e+02 Score=22.41 Aligned_cols=57 Identities=7% Similarity=0.040 Sum_probs=37.2
Q ss_pred cCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCC-CCccc-ccChHHHHHHHHHHHHh
Q 023794 197 LSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHT-GHAIQ-EDAPEEFASLILNFIAR 256 (277)
Q Consensus 197 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-gH~~~-~e~p~~~~~~i~~fl~~ 256 (277)
....+|++++.|++ .-.+..+++.|.++++.++.+ |++.- .-.|++..+.|.+=.++
T Consensus 144 g~~gVPV~lVsGDd---~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~~ 202 (270)
T cd08769 144 GEFGVPVVLVAGDS---ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVKE 202 (270)
T ss_pred hhcCCCEEEEecCH---HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHHH
Confidence 56689999988875 223556677799988888663 64443 33456666666655544
No 356
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=25.51 E-value=1.4e+02 Score=20.29 Aligned_cols=29 Identities=24% Similarity=0.189 Sum_probs=16.4
Q ss_pred EEccCCCCcccHHHHHHhhhh-cCeEEEEcCCC
Q 023794 11 CLHGGGYSGLSFALAAGKIKE-KARVVAMDLRG 42 (277)
Q Consensus 11 ~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G 42 (277)
++-|.|.... .+++.... ||+|..+|.|.
T Consensus 2 ~I~GaG~va~---al~~la~~lg~~v~v~d~r~ 31 (136)
T PF13478_consen 2 VIFGAGHVAR---ALARLAALLGFRVTVVDPRP 31 (136)
T ss_dssp EEES-STCHH---HHHHHHHHCTEEEEEEES-C
T ss_pred EEEeCcHHHH---HHHHHHHhCCCEEEEEcCCc
Confidence 4445554443 34443333 89999999993
No 357
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=25.44 E-value=94 Score=16.30 Aligned_cols=32 Identities=16% Similarity=0.006 Sum_probs=23.4
Q ss_pred cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 023794 32 KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKE 69 (277)
Q Consensus 32 ~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~ 69 (277)
+|.+.++|+||+- ....|.++..+.+.+.+..
T Consensus 13 ~y~~~~pdlpg~~------t~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 13 GYVAYFPDLPGCF------TQGDTLEEALENAKEALEL 44 (48)
T ss_dssp SEEEEETTCCTCE------EEESSHHHHHHHHHHHHHH
T ss_pred eEEEEeCCccChh------hcCCCHHHHHHHHHHHHHH
Confidence 6889999999864 1245778877777777654
No 358
>PRK06193 hypothetical protein; Provisional
Probab=25.39 E-value=1.3e+02 Score=22.36 Aligned_cols=53 Identities=15% Similarity=0.076 Sum_probs=31.6
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 54 LSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 54 ~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
.+.+.+.+++..+|+.+.. ..+.+.+|||..+ +....-++.+.....+++.+.
T Consensus 135 ~~~~~y~~~l~~~I~~l~~-~~~~vLlVgHnp~----i~~l~g~~~~~~g~~~~~~~~ 187 (206)
T PRK06193 135 ERNALLKAGLRPLLTTPPD-PGTNTVLVGHDDN----LEAATGIYPEPEGEAAVFEPL 187 (206)
T ss_pred hhHHHHHHHHHHHHhhCCC-CCCeEEEEeCchH----HHHHhCCCCccCccEEEEEeC
Confidence 4566677888888888752 3457999999953 332333331323335666554
No 359
>COG3621 Patatin [General function prediction only]
Probab=25.37 E-value=2.6e+02 Score=22.62 Aligned_cols=57 Identities=25% Similarity=0.389 Sum_probs=33.9
Q ss_pred hhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCC-CCcEEE-EEeChhHHHHHHHHHHh
Q 023794 29 IKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQ-PPSIVL-VGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 29 l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~~l-vG~S~Gg~ia~~~a~~~ 97 (277)
+...|++..+|=-|.- + .+...+...++...+.. .+.+.+ -|.|.||.+++.+|.-.
T Consensus 5 ~msk~rIlsldGGGvr------G------~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~k 63 (394)
T COG3621 5 LMSKYRILSLDGGGVR------G------AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGK 63 (394)
T ss_pred cccceeEEEecCCccc------c------HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCC
Confidence 3446778877754321 1 33445555555543221 134444 48999999999998754
No 360
>PLN00416 carbonate dehydratase
Probab=25.30 E-value=1.1e+02 Score=23.64 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHH
Q 023794 61 NDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVA 94 (277)
Q Consensus 61 ~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a 94 (277)
..|.-.+..| +.+.++++|||--|++...+.
T Consensus 128 asLEyAv~~L---~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 128 AAVEYAVVHL---KVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred hHHHHHHHHh---CCCEEEEecCCCchHHHHHHh
Confidence 3455556667 777899999998888766554
No 361
>PF15566 Imm18: Immunity protein 18
Probab=24.64 E-value=94 Score=17.06 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHH
Q 023794 56 IETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSV 89 (277)
Q Consensus 56 ~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~i 89 (277)
++.+++++..+.... ..+.++++--||||.-
T Consensus 4 L~~L~~~l~~L~~~~---~~~H~Hlmtp~WgG~E 34 (52)
T PF15566_consen 4 LELLQDQLENLQEKE---PFDHEHLMTPDWGGEE 34 (52)
T ss_pred HHHHHHHHHHHHhcc---CCCCceeccccccccc
Confidence 344555555555544 4567899999999863
No 362
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=24.58 E-value=3.1e+02 Score=23.07 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=23.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccC
Q 023794 74 QPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVV 111 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~ 111 (277)
..++++++| ||.+++++|...- ..=..+.++...
T Consensus 147 ~~~~vvViG---gG~ig~E~A~~l~-~~g~~Vtli~~~ 180 (438)
T PRK13512 147 QVDKALVVG---AGYISLEVLENLY-ERGLHPTLIHRS 180 (438)
T ss_pred CCCEEEEEC---CCHHHHHHHHHHH-hCCCcEEEEecc
Confidence 356899999 6788888887654 333456666543
No 363
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=24.44 E-value=1.5e+02 Score=16.91 Aligned_cols=33 Identities=9% Similarity=0.221 Sum_probs=25.1
Q ss_pred CCccEEEeCCCCCcccccChHHHHHHHHHHHHhc
Q 023794 224 GKFQMVVVRHTGHAIQEDAPEEFASLILNFIARN 257 (277)
Q Consensus 224 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 257 (277)
|+ +.+.+-++-++.-.|.++++.+.+.+|-++.
T Consensus 26 PD-TvItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 26 PD-TVITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred CC-eEEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 55 4555556677778888999999999998764
No 364
>PRK14974 cell division protein FtsY; Provisional
Probab=24.37 E-value=3.9e+02 Score=21.70 Aligned_cols=65 Identities=18% Similarity=0.385 Sum_probs=37.6
Q ss_pred cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhc-ccccceEEEE
Q 023794 32 KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKT-LRSLHGLVVV 108 (277)
Q Consensus 32 ~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p-~~~v~~lvl~ 108 (277)
++.++.+|-.|... +-..+.+.+..+.+.+ .+..+++|.-+.-|.-+..-+..+. .-.+.++|+-
T Consensus 222 ~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~---~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 222 GIDVVLIDTAGRMH---------TDANLMDELKKIVRVT---KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCEEEEECCCccC---------CcHHHHHHHHHHHHhh---CCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 67788888876532 1233444555555544 4455677776666666666665442 1346777764
No 365
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=24.33 E-value=46 Score=26.46 Aligned_cols=30 Identities=13% Similarity=0.370 Sum_probs=24.0
Q ss_pred CCccEEEeCCCCCcccccChHHHHHHHHHH
Q 023794 224 GKFQMVVVRHTGHAIQEDAPEEFASLILNF 253 (277)
Q Consensus 224 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 253 (277)
.|..+..+..+||+...++|+.....++.+
T Consensus 381 knl~f~wilraghmvp~Dnp~~a~hmlr~v 410 (414)
T KOG1283|consen 381 KNLSFFWILRAGHMVPADNPAAASHMLRHV 410 (414)
T ss_pred ccceeEEeecccCcccCCCHHHHhhheeec
Confidence 455788889999999999998877666544
No 366
>PRK13938 phosphoheptose isomerase; Provisional
Probab=24.22 E-value=2.9e+02 Score=20.24 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=20.1
Q ss_pred CcEEEEEeChhHHHHHHHHHHh
Q 023794 76 PSIVLVGHSMGGSVAVHVAAKK 97 (277)
Q Consensus 76 ~~~~lvG~S~Gg~ia~~~a~~~ 97 (277)
++++++|..-.|.+|..++.+.
T Consensus 46 ~rI~i~G~G~S~~~A~~fa~~L 67 (196)
T PRK13938 46 ARVFMCGNGGSAADAQHFAAEL 67 (196)
T ss_pred CEEEEEeCcHHHHHHHHHHHHc
Confidence 6899999999999999999875
No 367
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=24.22 E-value=59 Score=24.49 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=37.7
Q ss_pred CCeEEEEccCCCCccc--HHHHHHhhhh-cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHH-HHHHHHHHhcCCCCcEEEE
Q 023794 6 GPVIFCLHGGGYSGLS--FALAAGKIKE-KARVVAMDLRGHGKSSSENDIDLSIETMCND-VLAVLKEMYGEQPPSIVLV 81 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~--~~~~~~~l~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~~~~lv 81 (277)
.|+||++.|+.+++.. -..+...|.. +++|.++.-| +-++...+ +-.+-..+... ..+.++
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p-------------t~eE~~~p~lwRfw~~lP~~--G~I~if 94 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP-------------TDEELRRPFLWRFWRALPAR--GQIGIF 94 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS---------------HHHHTS-TTHHHHTTS--T--T-EEEE
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC-------------ChhHcCCCcHHHHHHhCCCC--CEEEEE
Confidence 4689999998776554 4566666654 8999999876 22222222 34455555433 357777
Q ss_pred EeChhHH
Q 023794 82 GHSMGGS 88 (277)
Q Consensus 82 G~S~Gg~ 88 (277)
=-||=.-
T Consensus 95 ~rSWY~~ 101 (228)
T PF03976_consen 95 DRSWYED 101 (228)
T ss_dssp ES-GGGG
T ss_pred ecchhhH
Confidence 7776443
No 368
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=24.09 E-value=1.8e+02 Score=19.98 Aligned_cols=32 Identities=13% Similarity=0.257 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHH
Q 023794 60 CNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVA 94 (277)
Q Consensus 60 ~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a 94 (277)
...+.-.+..+ +.+.++++||+--|++...+.
T Consensus 42 ~~sle~av~~l---~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 42 LASLEYAVYHL---GVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHTS---T-SEEEEEEETT-HHHHHHHH
T ss_pred hhheeeeeecC---CCCEEEEEcCCCchHHHHHHh
Confidence 33444444555 678899999998888774443
No 369
>PTZ00445 p36-lilke protein; Provisional
Probab=24.03 E-value=2.8e+02 Score=20.80 Aligned_cols=64 Identities=19% Similarity=0.128 Sum_probs=36.5
Q ss_pred HHHHHHhhhh-cCeEEEEcCCCC------C-CCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChh
Q 023794 22 FALAAGKIKE-KARVVAMDLRGH------G-KSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMG 86 (277)
Q Consensus 22 ~~~~~~~l~~-~~~vi~~d~~G~------G-~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~G 86 (277)
-+.+.+.|.+ |.++++.|+=.. | .-.+..+...-......++..++..+...+. ++.+|-+|--
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I-~v~VVTfSd~ 102 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNI-KISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCC-eEEEEEccch
Confidence 4567777877 999999997321 1 1111101111122234456677777755454 5899999854
No 370
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=24.00 E-value=2.5e+02 Score=21.87 Aligned_cols=57 Identities=12% Similarity=0.145 Sum_probs=37.0
Q ss_pred cCCCccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCC-CCcccc-cChHHHHHHHHHHHHh
Q 023794 197 LSCPVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHT-GHAIQE-DAPEEFASLILNFIAR 256 (277)
Q Consensus 197 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-gH~~~~-e~p~~~~~~i~~fl~~ 256 (277)
....+|++++.|++- + .+..+.+.|.++.+.++.+ |++.-. -.|++..+.|.+=.++
T Consensus 143 g~~gVPV~lvsGDd~-~--~~ea~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~~ 201 (265)
T cd00281 143 GYYGVPVVMVAGDAE-V--CKEAKAYDAQVETVVTKKGMGRFSVKAPSPQKVLRAIREGTEG 201 (265)
T ss_pred hhcCCCEEEEecCHH-H--HHHHHHhCCCceEEEEeeeeCCCccccCCHHHHHHHHHHHHHH
Confidence 466899988887652 2 2445667799988888663 644433 3567777776666543
No 371
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=23.96 E-value=2.1e+02 Score=18.52 Aligned_cols=32 Identities=19% Similarity=0.128 Sum_probs=20.7
Q ss_pred EEEccCCCCcccH--HHHHHhhhhcCeEEEEcCCCC
Q 023794 10 FCLHGGGYSGLSF--ALAAGKIKEKARVVAMDLRGH 43 (277)
Q Consensus 10 v~~HG~~~~~~~~--~~~~~~l~~~~~vi~~d~~G~ 43 (277)
|++||-+++.... +.++..+ ++.++.+|..-.
T Consensus 1 ill~G~~G~GKT~l~~~la~~l--~~~~~~i~~~~~ 34 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL--GFPFIEIDGSEL 34 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT--TSEEEEEETTHH
T ss_pred CEEECcCCCCeeHHHHHHHhhc--cccccccccccc
Confidence 6899977766553 2344443 678888887643
No 372
>PLN03019 carbonic anhydrase
Probab=23.84 E-value=1.6e+02 Score=23.69 Aligned_cols=31 Identities=19% Similarity=0.314 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHH
Q 023794 60 CNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHV 93 (277)
Q Consensus 60 ~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~ 93 (277)
...|.-.+..| +.+.++++|||--|.+...+
T Consensus 202 ~aSIEYAV~~L---~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 202 GAAIEYAVLHL---KVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred chhHHHHHHHh---CCCEEEEecCCCchHHHHHH
Confidence 34566666777 77789999999877766544
No 373
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=23.78 E-value=68 Score=25.41 Aligned_cols=20 Identities=20% Similarity=0.532 Sum_probs=17.0
Q ss_pred CCCCCeEEEEccCCCCcccH
Q 023794 3 GTEGPVIFCLHGGGYSGLSF 22 (277)
Q Consensus 3 g~~~p~vv~~HG~~~~~~~~ 22 (277)
.+.+|.++=+||++++...|
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNY 125 (344)
T ss_pred CCCCCeEEEecCCCCCchhH
Confidence 35789999999999988876
No 374
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=23.70 E-value=3.9e+02 Score=21.94 Aligned_cols=85 Identities=19% Similarity=0.221 Sum_probs=52.4
Q ss_pred eEEEEccCCCCcc-------cHHHHHHhhhhcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 8 VIFCLHGGGYSGL-------SFALAAGKIKEKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 8 ~vv~~HG~~~~~~-------~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
.+|++|+-..+.. .|..+.+.+.+.-.+-.+|....|..++. ++..+..++-+++. +. -++
T Consensus 199 s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~------~d~DA~avR~F~~~----g~--~~~ 266 (427)
T KOG1411|consen 199 SIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGD------LDKDAQAVRLFVED----GH--EIL 266 (427)
T ss_pred cEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCC------chhhHHHHHHHHHc----CC--ceE
Confidence 4889998665554 68888888876555566777777655433 33334445555443 21 266
Q ss_pred EEeChhHHHHHHHHHHhcccccceEEEEcc
Q 023794 81 VGHSMGGSVAVHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 81 vG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~ 110 (277)
+..|+.-.+.+ |. ++|.++.+++.
T Consensus 267 laQSyAKNMGL-----Yg-ERvGa~svvc~ 290 (427)
T KOG1411|consen 267 LAQSYAKNMGL-----YG-ERVGALSVVCK 290 (427)
T ss_pred eehhhhhhcch-----hh-hccceeEEEec
Confidence 77775544332 66 88888877764
No 375
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=23.64 E-value=3e+02 Score=20.13 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=42.7
Q ss_pred hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhc-ccccceEEEE
Q 023794 31 EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKT-LRSLHGLVVV 108 (277)
Q Consensus 31 ~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p-~~~v~~lvl~ 108 (277)
+++.++.+|-+|.. ..-.+..+++..+++.. .+..++|+=-+..+.-.+..+..+- .-.+.++|+-
T Consensus 82 ~~~D~vlIDT~Gr~---------~~d~~~~~el~~~~~~~---~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 82 KGYDLVLIDTAGRS---------PRDEELLEELKKLLEAL---NPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp TTSSEEEEEE-SSS---------STHHHHHHHHHHHHHHH---SSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred cCCCEEEEecCCcc---------hhhHHHHHHHHHHhhhc---CCccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 37999999999754 22345567777787777 4556777766666666665555432 1357888874
No 376
>PF01872 RibD_C: RibD C-terminal domain; InterPro: IPR002734 This domain is found in the C terminus of the bifunctional deaminase-reductase of Escherichia coli, Bacillus subtilis and other bacteria in combination with IPR002125 from INTERPRO that catalyses the second and third steps in the biosynthesis of riboflavin, i.e., the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (deaminase) and the subsequent reduction of the ribosyl side chain (reductase) []. The domain is also present in some HTP reductases from archaea and fungi.; GO: 0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity, 0009231 riboflavin biosynthetic process, 0055114 oxidation-reduction process; PDB: 3KY8_B 3KGY_B 2GD9_B 3JTW_B 2XW7_B 2D5N_B 2B3Z_A 3EX8_B 2AZN_A 2P4G_A ....
Probab=23.56 E-value=2.9e+02 Score=19.99 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=26.0
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEc
Q 023794 62 DVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVD 109 (277)
Q Consensus 62 d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~ 109 (277)
|+.+.++.|...+.+.+.+.| ||.+...+... +.|.-+.+.-
T Consensus 122 dl~~~l~~L~~~g~~~i~v~G---G~~l~~~~l~~---gLvDEl~l~i 163 (200)
T PF01872_consen 122 DLEEALRRLKERGGKDILVEG---GGSLNGSFLRA---GLVDELSLTI 163 (200)
T ss_dssp HHHHHHHHHHHTTTSEEEEEE---HHHHHHHHHHT---T--SEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEec---hHHHHHHHHhC---CCCCEEEEEE
Confidence 466666666655677788877 67766666654 5666665543
No 377
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=23.45 E-value=1.5e+02 Score=19.41 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=24.0
Q ss_pred cEEEEE-eChhHHHHHHHHHHhcccccceEEEEcc
Q 023794 77 SIVLVG-HSMGGSVAVHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 77 ~~~lvG-~S~Gg~ia~~~a~~~p~~~v~~lvl~~~ 110 (277)
|+.++| ..+.|...+++...+| .+.-+.+++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp--~~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHP--DFELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTS--TEEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCC--CccEEEeeee
Confidence 478999 8999999999998987 3555554443
No 378
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=23.15 E-value=1.3e+02 Score=24.71 Aligned_cols=18 Identities=28% Similarity=0.377 Sum_probs=16.2
Q ss_pred EEEEeChhHHHHHHHHHH
Q 023794 79 VLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~ 96 (277)
.++|-|.|+.++..++..
T Consensus 47 ~IaGtSAGALvAAl~asG 64 (382)
T cd07219 47 RVAGTSAGSVIAALVVCG 64 (382)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 599999999999999875
No 379
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=23.12 E-value=1.1e+02 Score=16.50 Aligned_cols=27 Identities=11% Similarity=0.311 Sum_probs=19.1
Q ss_pred HHHhhhhhhhcCCCccEEEEEeCCCCC
Q 023794 187 AWYEGLSEKFLSCPVPKLLLLAGTDRL 213 (277)
Q Consensus 187 ~~~~~~~~~~~~i~~P~l~i~g~~D~~ 213 (277)
.|..|++..+....+--+.|.|.+|..
T Consensus 10 SWM~DLrS~I~~~~I~ql~ipGsHns~ 36 (51)
T PF03490_consen 10 SWMSDLRSSIGEMAITQLFIPGSHNSG 36 (51)
T ss_pred HHHHHHHHHHhcceeeeEEeccccccc
Confidence 345566666677777778999999853
No 380
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=22.93 E-value=2.8e+02 Score=21.70 Aligned_cols=28 Identities=14% Similarity=0.101 Sum_probs=19.4
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Q 023794 55 SIETMCNDVLAVLKEMYGEQPPSIVLVGH 83 (277)
Q Consensus 55 ~~~~~~~d~~~~l~~l~~~~~~~~~lvG~ 83 (277)
....+.+.+.+.|+..... .++++|+||
T Consensus 194 ~~~~Ql~WL~~~L~~a~~~-~~~v~I~~H 221 (296)
T cd00842 194 DPAGQLQWLEDELQEAEQA-GEKVWIIGH 221 (296)
T ss_pred CHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 3456677788888776543 357889988
No 381
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.90 E-value=5e+02 Score=22.48 Aligned_cols=65 Identities=22% Similarity=0.371 Sum_probs=40.5
Q ss_pred hcCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh---------cccc
Q 023794 31 EKARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK---------TLRS 101 (277)
Q Consensus 31 ~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~---------p~~~ 101 (277)
++|.|+.+|-.|.-... +.+-..+..+++.- .++.++.||--+=|.=++.-+..+ | ..
T Consensus 465 ~gfDVvLiDTAGR~~~~---------~~lm~~l~k~~~~~---~pd~i~~vgealvg~dsv~q~~~fn~al~~~~~~-r~ 531 (587)
T KOG0781|consen 465 QGFDVVLIDTAGRMHNN---------APLMTSLAKLIKVN---KPDLILFVGEALVGNDSVDQLKKFNRALADHSTP-RL 531 (587)
T ss_pred cCCCEEEEeccccccCC---------hhHHHHHHHHHhcC---CCceEEEehhhhhCcHHHHHHHHHHHHHhcCCCc-cc
Confidence 48999999998743221 12233444444443 677888888887777666554432 3 45
Q ss_pred cceEEEE
Q 023794 102 LHGLVVV 108 (277)
Q Consensus 102 v~~lvl~ 108 (277)
|.++++-
T Consensus 532 id~~~lt 538 (587)
T KOG0781|consen 532 IDGILLT 538 (587)
T ss_pred cceEEEE
Confidence 7777774
No 382
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=22.87 E-value=84 Score=21.76 Aligned_cols=13 Identities=31% Similarity=0.519 Sum_probs=11.1
Q ss_pred EEEEEeChhHHHH
Q 023794 78 IVLVGHSMGGSVA 90 (277)
Q Consensus 78 ~~lvG~S~Gg~ia 90 (277)
.+++|.|-|+++.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 5899999999873
No 383
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=22.69 E-value=1e+02 Score=22.88 Aligned_cols=36 Identities=14% Similarity=0.234 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHH
Q 023794 57 ETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 57 ~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~ 95 (277)
......+.-.+..| +.+.++++||+--|++...+..
T Consensus 76 ~~~l~sleyAv~~L---~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 76 GSVLRSLEYAVYVL---GVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred cchhHHHHHHHHHc---CCCEEEEecCCCcHHHHhcccc
Confidence 34455566666777 7788999999988887665543
No 384
>PF08257 Sulfakinin: Sulfakinin family; InterPro: IPR013259 The sulfakinin (SK) family of neuropeptides have only been identified in crustaceans and insects. For most species there is the potential for producing two sulfakinin peptides, one has a short sulfakinin sequence. The function of the sulfakinins is difficult to assess. For the Periplaneta americana (American cockroach), various forms of the endogenous sulfakinins have been shown to be active on the hindgut, and also on the heart. In Calliphora vomitoria (Blue blowfly) the peptides act as neurotransmitters or neuromodulators, linking the brain with all thoracic and abdominal ganglia. In adults of Penaeus monodon (Penoeid shrimp) they appear to be restricted to a few neurones in the brain with a neural pathway extending along to the ventral thoracic and abdominal ganglia [].
Probab=22.45 E-value=42 Score=10.80 Aligned_cols=6 Identities=33% Similarity=0.562 Sum_probs=3.2
Q ss_pred CCCCCc
Q 023794 232 RHTGHA 237 (277)
Q Consensus 232 ~~~gH~ 237 (277)
++-||+
T Consensus 2 ~dyghm 7 (9)
T PF08257_consen 2 DDYGHM 7 (9)
T ss_pred Cccccc
Confidence 345665
No 385
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=22.36 E-value=1.2e+02 Score=23.60 Aligned_cols=51 Identities=14% Similarity=0.222 Sum_probs=27.5
Q ss_pred cHHHHHH-HHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEE
Q 023794 55 SIETMCN-DVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVV 107 (277)
Q Consensus 55 ~~~~~~~-d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl 107 (277)
++++-.. -+..+++.+....-.+|.=+|-.|||. +..+|.++. -.|.++.+
T Consensus 42 ~Le~AQ~~k~~~~~~~~~l~~G~~vLDiGcGwG~~-~~~~a~~~g-~~v~gitl 93 (273)
T PF02353_consen 42 TLEEAQERKLDLLCEKLGLKPGDRVLDIGCGWGGL-AIYAAERYG-CHVTGITL 93 (273)
T ss_dssp -HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHH-HHHHHHHH---EEEEEES
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCEEEEeCCCccHH-HHHHHHHcC-cEEEEEEC
Confidence 4444333 344555555433445788899999887 555777765 56666665
No 386
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=22.28 E-value=3.4e+02 Score=20.94 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhc
Q 023794 58 TMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKT 98 (277)
Q Consensus 58 ~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p 98 (277)
.+++.+..+.+.+.. ..+++++|..-.|.++...|.+.+
T Consensus 34 ~I~~av~~~~~~l~~--ggrl~~~GaGtSg~la~~da~e~~ 72 (257)
T cd05007 34 QIARAVDAAAERLRA--GGRLIYVGAGTSGRLGVLDASELP 72 (257)
T ss_pred HHHHHHHHHHHHHHc--CCEEEEEcCcHHHHHHHHHHHhcc
Confidence 344444444455532 357999999999999988777654
No 387
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.23 E-value=1.5e+02 Score=21.62 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHH
Q 023794 60 CNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVA 94 (277)
Q Consensus 60 ~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a 94 (277)
...+.-.+..| +.+.++++|||--|.+...+.
T Consensus 74 ~asleyav~~l---~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 74 SAAIEYAVAVL---KVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhHHHHHHHh---CCCEEEEeCCCcchHHHHHhc
Confidence 34455556677 777899999998777665443
No 388
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=22.00 E-value=1.7e+02 Score=26.71 Aligned_cols=21 Identities=33% Similarity=0.298 Sum_probs=17.4
Q ss_pred CCcEEEEEeChhHHHHHHHHH
Q 023794 75 PPSIVLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 75 ~~~~~lvG~S~Gg~ia~~~a~ 95 (277)
..--++.|.|.||.++..+|.
T Consensus 65 ~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 65 VRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCceEEeeCHHHHHHHHHHc
Confidence 334479999999999999886
No 389
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=21.99 E-value=1e+02 Score=32.75 Aligned_cols=21 Identities=29% Similarity=0.268 Sum_probs=17.9
Q ss_pred CCCcEEEEEeChhHHHHHHHH
Q 023794 74 QPPSIVLVGHSMGGSVAVHVA 94 (277)
Q Consensus 74 ~~~~~~lvG~S~Gg~ia~~~a 94 (277)
+.++-.++|||+|=+.|+.+|
T Consensus 672 Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 672 GFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred CCccceeecCCHHHHHHHHHh
Confidence 667789999999998888766
No 390
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=21.97 E-value=2.8e+02 Score=19.19 Aligned_cols=50 Identities=18% Similarity=0.127 Sum_probs=33.5
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcc
Q 023794 62 DVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTA 115 (277)
Q Consensus 62 d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~ 115 (277)
++...|+.. +.+.++++|.+.-..+..-....+- ...+-.++.+......
T Consensus 78 ~L~~~L~~~---gi~~lii~G~~T~~CV~~Ta~~a~~-~g~~v~v~~Da~as~~ 127 (157)
T cd01012 78 AFRKALKAT---GRKQVVLAGLETHVCVLQTALDLLE-EGYEVFVVADACGSRS 127 (157)
T ss_pred HHHHHHHhc---CCCEEEEEEeeccHHHHHHHHHHHH-CCCEEEEEeeCCCCCC
Confidence 555666655 7788999999988777665544443 4577777777655444
No 391
>PF00857 Isochorismatase: Isochorismatase family; InterPro: IPR000868 This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate (3.3.2.1 from EC).; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1XN4_A 3KL2_F 1YZV_A 3IRV_A 1IM5_A 1ILW_A 3PL1_A 1NF9_A 1NF8_A 1X9G_A ....
Probab=21.89 E-value=2.9e+02 Score=19.30 Aligned_cols=50 Identities=18% Similarity=0.223 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHhcccccceEEEEccCCCcc
Q 023794 62 DVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKKTLRSLHGLVVVDVVEGTA 115 (277)
Q Consensus 62 d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~ 115 (277)
++.++|+.. +.+.++|+|...-+.+..-+...+- ..+.-+++.+......
T Consensus 102 ~L~~~L~~~---gi~~vil~G~~t~~CV~~Ta~~a~~-~g~~v~v~~Da~~~~~ 151 (174)
T PF00857_consen 102 DLDEILRKR---GIDTVILCGVATDVCVLATARDAFD-RGYRVIVVEDACASYS 151 (174)
T ss_dssp SHHHHHHHT---TESEEEEEEESTTTHHHHHHHHHHH-TT-EEEEEEEEEEBSS
T ss_pred ccccccccc---ccceEEEcccccCcEEehhHHHHHH-CCCEEEEEChhhcCCC
Confidence 566666665 6788999999888887554444443 4566677776654444
No 392
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=21.80 E-value=2.2e+02 Score=21.32 Aligned_cols=46 Identities=20% Similarity=0.252 Sum_probs=28.3
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeChhH----HHHHHHHHHhcccccceEEEEcc
Q 023794 62 DVLAVLKEMYGEQPPSIVLVGHSMGG----SVAVHVAAKKTLRSLHGLVVVDV 110 (277)
Q Consensus 62 d~~~~l~~l~~~~~~~~~lvG~S~Gg----~ia~~~a~~~p~~~v~~lvl~~~ 110 (277)
+..+||..+-....-+.++...|-|+ .+++..|+++. =-.+|++-+
T Consensus 28 ~~aEfISAlAAG~nAkliVe~~s~g~~~~ttiaLaaAAr~T---gGR~vCIvp 77 (218)
T PF07279_consen 28 GVAEFISALAAGWNAKLIVEAWSSGGAISTTIALAAAARQT---GGRHVCIVP 77 (218)
T ss_pred CHHHHHHHHhccccceEEEEEecCCCchHhHHHHHHHHHhc---CCeEEEEcC
Confidence 35566776654334578888888875 56677777765 233455443
No 393
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=21.76 E-value=4.2e+02 Score=21.20 Aligned_cols=76 Identities=21% Similarity=0.354 Sum_probs=47.8
Q ss_pred CCeEEEEccCCCCcccHHHHHHhhhh--cCeEEEEcC----CCC--CCCCC----------------CCCCCCcHHHHHH
Q 023794 6 GPVIFCLHGGGYSGLSFALAAGKIKE--KARVVAMDL----RGH--GKSSS----------------ENDIDLSIETMCN 61 (277)
Q Consensus 6 ~p~vv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~----~G~--G~S~~----------------~~~~~~~~~~~~~ 61 (277)
.+.+++|-|-.++...-- +-.|++ +-.||..|- +|. |...+ ++...|+..++.+
T Consensus 2 ~~~~i~I~GPTAsGKT~l--ai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 2 KPKLIVIAGPTASGKTAL--AIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred CccEEEEECCCCcCHHHH--HHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 466888888666655432 223443 567888884 343 22211 1224689999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeC
Q 023794 62 DVLAVLKEMYGEQPPSIVLVGHS 84 (277)
Q Consensus 62 d~~~~l~~l~~~~~~~~~lvG~S 84 (277)
+....++.+..++ +-.+|||-|
T Consensus 80 ~a~~~i~~i~~rg-k~pIlVGGT 101 (308)
T COG0324 80 DALAAIDDILARG-KLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHhCC-CCcEEEccH
Confidence 9999999887654 235788755
No 394
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=21.70 E-value=1.3e+02 Score=21.21 Aligned_cols=34 Identities=9% Similarity=0.070 Sum_probs=28.8
Q ss_pred CCCeEEEEccCCCCcccHHHHHHhhhhcCeEEEE
Q 023794 5 EGPVIFCLHGGGYSGLSFALAAGKIKEKARVVAM 38 (277)
Q Consensus 5 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~vi~~ 38 (277)
++|-++++|.+++.......+...+.++..++++
T Consensus 59 g~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i 92 (162)
T cd07037 59 GRPVAVVCTSGTAVANLLPAVVEAYYSGVPLLVL 92 (162)
T ss_pred CCCEEEEECCchHHHHHhHHHHHHHhcCCCEEEE
Confidence 4788999999998888888888888888877776
No 395
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=21.56 E-value=1.2e+02 Score=25.16 Aligned_cols=62 Identities=15% Similarity=0.161 Sum_probs=37.1
Q ss_pred HHHhhhhcCeEEEEcCCCCCCCCCC---------CCCCCcHHHHH-HHHHHHHHHHhcCCCCcEEEEEeChhHHHHHH
Q 023794 25 AAGKIKEKARVVAMDLRGHGKSSSE---------NDIDLSIETMC-NDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVH 92 (277)
Q Consensus 25 ~~~~l~~~~~vi~~d~~G~G~S~~~---------~~~~~~~~~~~-~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~ 92 (277)
+++.|.++-.|-.+-+||.-..... .+.-.+++--- +++..+++.+ +++-+|.||||.-++.
T Consensus 275 IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L------~l~~~a~SlGgveSLi 346 (396)
T COG0626 275 IAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSL------KLFKLAESLGGVESLI 346 (396)
T ss_pred HHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhC------CccEEeccCCCccccc
Confidence 4556666666777777773221110 01112222222 7888999988 4789999999986553
No 396
>PLN03014 carbonic anhydrase
Probab=21.56 E-value=2e+02 Score=23.31 Aligned_cols=31 Identities=19% Similarity=0.314 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHH
Q 023794 60 CNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHV 93 (277)
Q Consensus 60 ~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~ 93 (277)
...|.-.+..| +.+.++++|||--|.+...+
T Consensus 207 ~asLEYAV~~L---~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 207 GAAIEYAVLHL---KVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred hhHHHHHHHHh---CCCEEEEeCCCCchHHHHHH
Confidence 34555566777 77789999999877766544
No 397
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.
Probab=21.43 E-value=1.9e+02 Score=21.89 Aligned_cols=65 Identities=12% Similarity=0.147 Sum_probs=33.6
Q ss_pred CCCCCCCCCCCCcHHHHHH------HHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHHHHh----cccccceEEEEc
Q 023794 43 HGKSSSENDIDLSIETMCN------DVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVAAKK----TLRSLHGLVVVD 109 (277)
Q Consensus 43 ~G~S~~~~~~~~~~~~~~~------d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~----p~~~v~~lvl~~ 109 (277)
||..+.+.....|-+++.+ .+..+++.+.. ...+.++|.|+.=.-...+.... ....-...+++.
T Consensus 143 HG~~~~~~~~VlT~~dY~~~~~~~~~~~~~l~~ll~--~~~~LFiG~S~~D~~i~~ll~~~~~~~~~~~~~hy~~~~ 217 (242)
T cd01406 143 HGDVDDDESIVLTKSDYERYYLKNGWATKFLKSDLE--KYTVLFIGYSLTDPNIRYLLERLRKNYEGKHASHFALLQ 217 (242)
T ss_pred ecccCCCCceEecHHHHHHHHhccHHHHHHHHHHHh--cCcEEEEEcCCCCCcHHHHHHHHHHHhccCCCceEEEEe
Confidence 3444444333345555544 34455555533 24689999998765554444331 112345555554
No 398
>PF02972 Phycoerythr_ab: Phycoerythrin, alpha/beta chain; InterPro: IPR004228 Cryptophytes are unicellular photosynthetic algae that use a lumenally located light-harvesting system, which is distinct from the phycobilisome structure found in cyanobacteria and red algae. One of the key components of this system is water-soluble phycoerythrin (PE) 545 whose expression is enhanced by low light levels []. Phycoerythrin (PE) 545 is a heterodimeric of alpha(1)alpha(2)betabeta subunits. Each alpha subunit carries a covalently linked 15,16-dihydrobiliverdin chromophore that probably acts as the final energy acceptor. The architecture of the heterodimer suggests that PE 545 may dock to an acceptor protein via a deep cleft and that energy may be transferred via this intermediary protein to the reaction centre [].; GO: 0030089 phycobilisome; PDB: 1XG0_B 1QGW_B 1XF6_B.
Probab=21.31 E-value=80 Score=17.49 Aligned_cols=12 Identities=25% Similarity=0.573 Sum_probs=6.7
Q ss_pred EEEEcCCCCCCC
Q 023794 35 VVAMDLRGHGKS 46 (277)
Q Consensus 35 vi~~d~~G~G~S 46 (277)
|-.||.|||.+.
T Consensus 5 ItiFDhRGC~r~ 16 (57)
T PF02972_consen 5 ITIFDHRGCDRA 16 (57)
T ss_dssp EEEEE-TT-SS-
T ss_pred EEEecccccCCC
Confidence 557899999554
No 399
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=21.29 E-value=1.7e+02 Score=22.02 Aligned_cols=63 Identities=14% Similarity=0.085 Sum_probs=36.9
Q ss_pred HHhhhhcCeEEEEcCCCCCCCCCCC-CCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEeChhHHHHH
Q 023794 26 AGKIKEKARVVAMDLRGHGKSSSEN-DIDLSIETMCNDVLAVLKEMYGEQPPSIVLVGHSMGGSVAV 91 (277)
Q Consensus 26 ~~~l~~~~~vi~~d~~G~G~S~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~ 91 (277)
++.+++-..+-.|-.+--|.|.... ....+-.+-++|+.+++...... -.-+=|.|.|+.++-
T Consensus 56 i~lyaecm~lPlyrr~i~g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~---~p~~eaVS~GAIlS~ 119 (277)
T KOG2316|consen 56 IDLYAECMGLPLYRRRIRGRSINQKLQYTKTEGDEVEDLYELLKTVKEK---IPDVEAVSVGAILSD 119 (277)
T ss_pred HHHHHHHhcCceeeeeccCcccccccccccCCCchHHHHHHHHHHHHhh---CCCceeeehhhhHhH
Confidence 3444543333333333335554332 23456778889999999988432 125789999987654
No 400
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=21.02 E-value=81 Score=26.81 Aligned_cols=59 Identities=7% Similarity=0.091 Sum_probs=38.9
Q ss_pred CccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCCCCccccc------Ch------HHHHHHHHHHHHhcC
Q 023794 200 PVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHTGHAIQED------AP------EEFASLILNFIARNR 258 (277)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e------~p------~~~~~~i~~fl~~~~ 258 (277)
..-|++.+|..|++...-........+....|.|++|+.-+- -| ..+.+.|..||....
T Consensus 433 atnVvf~NG~~DPWh~LG~~~st~~~~~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~~~~ 503 (514)
T KOG2182|consen 433 ATNVVFPNGSLDPWHALGLQNSTDSSVVSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLHQQP 503 (514)
T ss_pred cceEEecCCCCCchhhhccccCCCCCceEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhhhcc
Confidence 457899999999986554444344566788999999987432 12 234455666665544
No 401
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.88 E-value=72 Score=25.27 Aligned_cols=17 Identities=29% Similarity=0.575 Sum_probs=15.0
Q ss_pred EEEEeChhHHHHHHHHH
Q 023794 79 VLVGHSMGGSVAVHVAA 95 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~ 95 (277)
.+.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 68899999999998874
No 402
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=20.75 E-value=3.2e+02 Score=22.81 Aligned_cols=77 Identities=14% Similarity=0.143 Sum_probs=42.7
Q ss_pred CCeEEEEccCCCCc---ccHHHHHHhhhh--cCeEEEEcCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEE
Q 023794 6 GPVIFCLHGGGYSG---LSFALAAGKIKE--KARVVAMDLRGHGKSSSENDIDLSIETMCNDVLAVLKEMYGEQPPSIVL 80 (277)
Q Consensus 6 ~p~vv~~HG~~~~~---~~~~~~~~~l~~--~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~l 80 (277)
+|.+|++...+.+. +....++..+.+ +..|+.++-+|+..|. ....+...+.+...+..-.......+++
T Consensus 84 ~P~~I~V~tTC~se~IGDDi~~v~~~~~~~~~~pVi~v~tpgf~g~~-----~~G~~~~~~alv~~~~~~~~~~~~~vni 158 (407)
T TIGR01279 84 NPSVIFLLSSCTPEVIKMDLEGLAERLSTNFGVPVLFAPASGLDYTF-----TQGEDTVLAALVPFCPEAPASEQRALVL 158 (407)
T ss_pred CCCEEEEECCchHHHHHhhHHHHHHHHHHhhCCCEEEeeCCCccccH-----HHHHHHHHHHHHHhhccccCCCCCcEEE
Confidence 57788888866543 345566666653 7899999999885431 1123333333333222111111246788
Q ss_pred EEeChhH
Q 023794 81 VGHSMGG 87 (277)
Q Consensus 81 vG~S~Gg 87 (277)
+|.-..+
T Consensus 159 iG~~~~~ 165 (407)
T TIGR01279 159 VGSVNDI 165 (407)
T ss_pred EeccChh
Confidence 8865544
No 403
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.69 E-value=86 Score=23.98 Aligned_cols=18 Identities=33% Similarity=0.589 Sum_probs=16.2
Q ss_pred EEEEeChhHHHHHHHHHH
Q 023794 79 VLVGHSMGGSVAVHVAAK 96 (277)
Q Consensus 79 ~lvG~S~Gg~ia~~~a~~ 96 (277)
.++|-|.||.+|..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 588999999999999876
No 404
>PHA00350 putative assembly protein
Probab=20.61 E-value=1.9e+02 Score=24.12 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=25.1
Q ss_pred eEEEEccCCCCcccH----HHHHHhhhhcCeEEEEcCCCC
Q 023794 8 VIFCLHGGGYSGLSF----ALAAGKIKEKARVVAMDLRGH 43 (277)
Q Consensus 8 ~vv~~HG~~~~~~~~----~~~~~~l~~~~~vi~~d~~G~ 43 (277)
.|.+++|.+++...+ ..+.+.+.+|..|++ +.+|.
T Consensus 2 mI~l~tG~pGSGKT~~aV~~~i~palk~GR~V~T-NI~Gl 40 (399)
T PHA00350 2 MIYAIVGRPGSYKSYEAVVYHIIPALKDGRKVIT-NIPGL 40 (399)
T ss_pred ceEEEecCCCCchhHHHHHHHHHHHHHCCCEEEE-CCCCC
Confidence 378899988887664 356677878876655 77763
No 405
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=20.17 E-value=3.7e+02 Score=20.98 Aligned_cols=57 Identities=16% Similarity=0.108 Sum_probs=0.0
Q ss_pred CccEEEEEeCCCCCCchhhhhhhcCCccEEEeCCCCCcccccCh-HHHHHHHHHHHHh
Q 023794 200 PVPKLLLLAGTDRLDRPLTIGQMQGKFQMVVVRHTGHAIQEDAP-EEFASLILNFIAR 256 (277)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~~ 256 (277)
+.|+.++-++==-+.-..++.+..|+.+++.+-+..+++.-+++ +++.+...+.++.
T Consensus 5 ~~~IgvFDSGVGGLsVlrei~~~LP~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~ 62 (269)
T COG0796 5 QPPIGVFDSGVGGLSVLREIRRQLPDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDF 62 (269)
T ss_pred CCeEEEEECCCCcHHHHHHHHHHCCCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHH
No 406
>PLN02154 carbonic anhydrase
Probab=20.12 E-value=1.8e+02 Score=22.95 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEeChhHHHHHHHH
Q 023794 61 NDVLAVLKEMYGEQPPSIVLVGHSMGGSVAVHVA 94 (277)
Q Consensus 61 ~d~~~~l~~l~~~~~~~~~lvG~S~Gg~ia~~~a 94 (277)
..+.-.+..| +.+.++++|||--|.+...+.
T Consensus 154 aslEyAv~~L---~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 154 SALEFAVTTL---QVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred hHHHHHHHHh---CCCEEEEecCCCchHHHHHHh
Confidence 3455556666 777899999998777766553
Done!