BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023798
(277 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 184/208 (88%), Positives = 198/208 (95%), Gaps = 1/208 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRTLYVGNLPGDIRE+EVEDLFYKYGP+AHIDLKIPPRPPGYAFVEFEEARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRS-EYRVLVTGLPSS 119
AIRGRDGYDFDGHRLRVELAHGGRG SSSDRHSS+S GRGRG + R EYRV+VTGLPSS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDRHSSYSGGRGRGGASRRSEYRVVVTGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNY+DMK+AIKK+DDSEFRNAFS+AY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIKKIDDSEFRNAFSQAY 180
Query: 180 VRVREYDHRRDGSQSPSRGRSYSRGRSE 207
VRVREYD +RD S+SP R RS+SRGR++
Sbjct: 181 VRVREYDSKRDSSRSPGRDRSHSRGRND 208
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 205/248 (82%), Positives = 219/248 (88%), Gaps = 4/248 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRT+YVGNLPGDIRE+EVEDLFYKYG IAHIDLK+PPRPPGYAFVEFE+A DA+D
Sbjct: 1 MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRS-EYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVELAHGGRG SSS DR+SSH RG R +YRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSNDRYSSHGGSRGGRGVSRRSDYRVLVTGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMK+AIKKLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRA 180
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSP 238
YVRVREYD +RD S+SPS R S R S SRSRSRGRS S+S S+SKSPKAK S+RSP
Sbjct: 181 YVRVREYDSKRDLSRSPS--RGRSYSRGRSYSRSRSRGRSRSKSHSRSKSPKAKPSQRSP 238
Query: 239 DRSRSRSA 246
+SRSRSA
Sbjct: 239 VKSRSRSA 246
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/188 (87%), Positives = 178/188 (94%), Gaps = 3/188 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRTLYVGNLPGDIREREVEDLFYKYGPI IDLKIPPRPPGY F+EFE+ARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGR--GVSRRSEYRVLVTGLP 117
AIRGRDGY+FDG+RLRVELAHGGRG+SS+ DR+SS+SS GR GVSRRSEYRVLV+GLP
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGQSSTNDRYSSYSSAGGRSGGVSRRSEYRVLVSGLP 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
SSASWQDLKDHMRRAGDVCFSQVFRD SGTTGIVDYTNYDDMK+AI+KLDDSEFRNAFSR
Sbjct: 121 SSASWQDLKDHMRRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSR 180
Query: 178 AYVRVREY 185
Y+RV+EY
Sbjct: 181 GYIRVKEY 188
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/248 (78%), Positives = 214/248 (86%), Gaps = 5/248 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +SRT+YVGNLPGDIREREVEDLF KYG I HIDLK+PPRPPGYAFVEFE+ +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRS-EYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVE AHGGRG SSS DR+SSHS+GRG R EYRV+V GLPS
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 146
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFSQVF DG GTTGIVDYTNYDDMK+AIKKLDDSEFRNAFS++
Sbjct: 147 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKS 206
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRS--RSQSKSPKAKSSRR 236
YVRVREYD RRD S+SP RG S+SRGRS SRSRSRSR S S S S+SKSPK KSS+R
Sbjct: 207 YVRVREYDSRRD-SRSPGRGPSHSRGRSYSRSRSRSRSHSRSYSPGHSRSKSPKGKSSQR 265
Query: 237 SPDRSRSR 244
SP +S ++
Sbjct: 266 SPAKSPAK 273
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/248 (78%), Positives = 214/248 (86%), Gaps = 5/248 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +SRT+YVGNLPGDIREREVEDLF KYG I HIDLK+PPRPPGYAFVEFE+ +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRS-EYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVE AHGGRG SSS DR+SSHS+GRG R EYRV+V GLPS
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 146
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFSQVF DG GTTGIVDYTNYDDMK+AIKKLDDSEFRNAFS++
Sbjct: 147 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKS 206
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRS--RSQSKSPKAKSSRR 236
YVRVREYD RRD S+SP RG S+SRGRS SRSRSRSR S S S S+SKSPK KSS+R
Sbjct: 207 YVRVREYDSRRD-SRSPGRGPSHSRGRSYSRSRSRSRSHSRSYSPGHSRSKSPKGKSSQR 265
Query: 237 SPDRSRSR 244
SP +S ++
Sbjct: 266 SPAKSPAK 273
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/248 (78%), Positives = 214/248 (86%), Gaps = 5/248 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +SRT+YVGNLPGDIREREVEDLF KYG I HIDLK+PPRPPGYAFVEFE+ +DAED
Sbjct: 102 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 161
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRS-EYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVE AHGGRG SSS DR+SSHS+GRG R EYRV+V GLPS
Sbjct: 162 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 221
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFSQVF DG GTTGIVDYTNYDDMK+AIKKLDDSEFRNAFS++
Sbjct: 222 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKS 281
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRS--RSQSKSPKAKSSRR 236
YVRVREYD RRD S+SP RG S+SRGRS SRSRSRSR S S S S+SKSPK KSS+R
Sbjct: 282 YVRVREYDSRRD-SRSPGRGPSHSRGRSYSRSRSRSRSHSRSYSPGHSRSKSPKGKSSQR 340
Query: 237 SPDRSRSR 244
SP +S ++
Sbjct: 341 SPAKSPAK 348
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/248 (78%), Positives = 214/248 (86%), Gaps = 5/248 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +SRT+YVGNLPGDIREREVEDLF KYG I HIDLK+PPRPPGYAFVEFE+ +DAED
Sbjct: 27 MSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAED 86
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRS-EYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVE AHGGRG SSS DR+SSHS+GRG R EYRV+V GLPS
Sbjct: 87 AIRGRDGYDFDGHRLRVEAAHGGRGNSSSRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPS 146
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFSQVF DG GTTGIVDYTNYDDMK+AIKKLDDSEFRNAFS++
Sbjct: 147 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKS 206
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRS--RSQSKSPKAKSSRR 236
YVRVREYD RRD S+SP RG S+SRGRS SRSRSRSR S S S S+SKSPK KSS+R
Sbjct: 207 YVRVREYDSRRD-SRSPGRGPSHSRGRSYSRSRSRSRSHSRSYSPGHSRSKSPKGKSSQR 265
Query: 237 SPDRSRSR 244
SP +S ++
Sbjct: 266 SPAKSPAK 273
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 173/187 (92%), Positives = 176/187 (94%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRS-EYRVLVTGLPSS 119
AIRGRDGYDFDGH+LRVELAHGGRG SSSDRHSSHS G R EYRVLVTGLPSS
Sbjct: 61 AIRGRDGYDFDGHQLRVELAHGGRGHSSSDRHSSHSGGGRGRGVSRRSEYRVLVTGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNY+DMKHAIKKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKHAIKKLDDSEFRNAFSRAY 180
Query: 180 VRVREYD 186
VRV+EYD
Sbjct: 181 VRVKEYD 187
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/188 (88%), Positives = 170/188 (90%), Gaps = 2/188 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEE+RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS--DRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVELAHGGRG SSS S G G SRRSEYRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMRRAGDVCFSQVF DG GT GIVDYTNYDDMK AI+KLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180
Query: 179 YVRVREYD 186
YVRV+EYD
Sbjct: 181 YVRVKEYD 188
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 201/252 (79%), Positives = 218/252 (86%), Gaps = 5/252 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRT+YVGNLPGDIREREVEDLF KYG I HIDLK+PPRPPGYAFVEFE+A+DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRS-EYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVE AHGGRG SSS DRH+SHS+GRG R EYRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFSQVF DG GTTGIVDYTNYDDMK+AIKKLDDSEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSP 238
YVRVREYD RRD S+SPS G S+S R S SRSRSR SYSR RSQSKSPK KSS+RSP
Sbjct: 181 YVRVREYDSRRDSSRSPSHGPSHS--RGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQRSP 238
Query: 239 DRS-RSRSASRS 249
+S + +S+ RS
Sbjct: 239 AKSPKGKSSQRS 250
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 201/252 (79%), Positives = 218/252 (86%), Gaps = 5/252 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRT+YVGNLPGDIREREVEDLF KYG I HIDLK+PPRPPGYAFVEFE+A+DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRS-EYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVE AHGGRG SSS DRH+SHS+GRG R EYRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHSSSKDRHNSHSNGRGGRGVSRRSEYRVLVTGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFSQVF DG GTTGIVDYTNYDDMK+AIKKLDDSEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSP 238
YVRVREYD RRD S+SPS G S+S R S SRSRSR SYSR RSQSKSPK KSS+RSP
Sbjct: 181 YVRVREYDSRRDSSRSPSHGPSHS--RGRSYSRSRSRSHSYSRDRSQSKSPKGKSSQRSP 238
Query: 239 DRS-RSRSASRS 249
+S + +S+ RS
Sbjct: 239 AKSPKGKSSQRS 250
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/188 (88%), Positives = 170/188 (90%), Gaps = 2/188 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEE+RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS--DRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVELAHGGRG SSS S G G SRRSEYRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMRRAGDVCFSQVF DG GT GIVDYTNYDDMK AI+KLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180
Query: 179 YVRVREYD 186
YVRV+EYD
Sbjct: 181 YVRVKEYD 188
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/246 (75%), Positives = 202/246 (82%), Gaps = 3/246 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRTLYVGNLPGDIR REVEDLFYKYGPI IDLKIPP+PPGYAFVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRG-RGVSRRSEYRVLVTGLPS 118
AI RDGYDFDG+RL VELAHGGRG SSS DR+S HS G RGVSRRS+YRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AG VCFSQVFR+ G TGIVDYTNYDD+K+AI+KLDDSEFRNAFSR+
Sbjct: 152 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 211
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRS-RSQSKSPKAKSSRRS 237
Y+RVREYD S S RSYSR RS SRSRS S+S S RS+S SPKAK SRRS
Sbjct: 212 YIRVREYDRSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLSHSYSGRSRSLSPKAKHSRRS 271
Query: 238 PDRSRS 243
SR
Sbjct: 272 FSLSRC 277
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 167/188 (88%), Positives = 170/188 (90%), Gaps = 2/188 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEE+RDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS--DRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVELAHGGRG SSS S G G SRRSEYRVLVTGLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRSEYRVLVTGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMRRAGDVCFSQVF DG GT GIVDYTNYDDMK AI+KLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRA 180
Query: 179 YVRVREYD 186
YVRV+EYD
Sbjct: 181 YVRVKEYD 188
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/246 (75%), Positives = 202/246 (82%), Gaps = 3/246 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRTLYVGNLPGDIR REVEDLFYKYGPI IDLKIPP+PPGYAFVEFE+ARDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRG-RGVSRRSEYRVLVTGLPS 118
AI RDGYDFDG+RL VELAHGGRG SSS DR+S HS G RGVSRRS+YRVLVTGLP
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AG VCFSQVFR+ G TGIVDYTNYDD+K+AI+KLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 180
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRS-RSQSKSPKAKSSRRS 237
Y+RVREYD S S RSYSR RS SRSRS S+S S RS+S SPKAK SRRS
Sbjct: 181 YIRVREYDRSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLSHSYSGRSRSLSPKAKHSRRS 240
Query: 238 PDRSRS 243
SR
Sbjct: 241 FSLSRC 246
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/260 (76%), Positives = 209/260 (80%), Gaps = 8/260 (3%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRTLYVGNLPGDIR+REV+DLFYKYGPI +DLKIPPRPPGYAFVEFE+ARDAED
Sbjct: 38 MSSRASRTLYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAED 97
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS--DRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
AIRGRDGY+FDG RLRVELAHGGR SS S RG SRRS+YRVLVTGLPS
Sbjct: 98 AIRGRDGYNFDGCRLRVELAHGGRRHSSPGDRYSSYSGRSGSRGPSRRSDYRVLVTGLPS 157
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYTNYDDMKHAIKKLDDSEFRNAFSR+
Sbjct: 158 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRS 217
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSP 238
YVRVREYD RR S+SPS G Y R RS SRSR+RSR +SR SKSP AK RS
Sbjct: 218 YVRVREYDSRRSYSRSPSCG-PYDRSRSRSRSRTRSRHSDWSR----SKSPGAKYHSRSL 272
Query: 239 DRSRSRSAS-RSRSGSKPRS 257
S RS S RS +GS PRS
Sbjct: 273 SVSPGRSVSPRSHAGSSPRS 292
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/240 (76%), Positives = 200/240 (83%), Gaps = 3/240 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRTLYVGNLPGDIR REVEDLFYKYGPI IDLKIPP+PPGYAFVEFE+ARDA+D
Sbjct: 1 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRG-RGVSRRSEYRVLVTGLPS 118
AI RDGYDFDG+RL VELAHGGRG SSS DR+S HS G RGVSRRS+YRVLVTGLP
Sbjct: 61 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AG VCFSQVFR+ G TGIVDYTNYDD+K+AI+KLDDSEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 180
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRS-RSQSKSPKAKSSRRS 237
Y+RVREYD S S RSYSR RS SRSRS S+S S RS+S SPKAK SRRS
Sbjct: 181 YIRVREYDRSHSRSPSRDSRRSYSRSRSPYVSRSRSCSLSHSYSGRSRSLSPKAKHSRRS 240
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/197 (82%), Positives = 172/197 (87%), Gaps = 2/197 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR SRT+YVGNLPGDIR REVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
AI GRDGY FDG RLRVE AHGGRG SSS DR+S S RG GV RR++YRVLVTGLPSS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRG-GVPRRTDYRVLVTGLPSS 119
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS+VFRD G GIVDYTNYDDMK+AI+KLDDSEFRNAFSRAY
Sbjct: 120 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 179
Query: 180 VRVREYDHRRDGSQSPS 196
VRV+EYD R S+SPS
Sbjct: 180 VRVKEYDSRHSYSRSPS 196
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/182 (80%), Positives = 171/182 (93%), Gaps = 1/182 (0%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR+SRT+YVGNLPGD+RERE++DLF+KYGPI IDLK+PPRPPGY F+EFE+ RDAEDAI
Sbjct: 2 SRSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAI 61
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
RGRDGY+FDG+RLRVE+AHGGRG SSDR+SS+ GRG VSRRSEYRV++TGLPSSASW
Sbjct: 62 RGRDGYNFDGYRLRVEIAHGGRGPPSSDRYSSY-GGRGGSVSRRSEYRVIITGLPSSASW 120
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
QDLKDHMRRAGDVCF+QVFR+G+GTTGIVD+TNYDDMK+AIKKLDDSEFRN FSR+Y+RV
Sbjct: 121 QDLKDHMRRAGDVCFAQVFREGNGTTGIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIRV 180
Query: 183 RE 184
+E
Sbjct: 181 KE 182
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/236 (69%), Positives = 184/236 (77%), Gaps = 1/236 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 190 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 249
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
AI GRD Y+FDG+RLRVELAHGGRG+S S DR S+SSGR GVSRRSEYRV+VTGLPSS
Sbjct: 250 AICGRDRYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSS 309
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYT Y+DMK+AI+KLDDSEFRNAFSRAY
Sbjct: 310 ASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSEFRNAFSRAY 369
Query: 180 VRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSR 235
+RVREYD R +S SRS RS S+S++P + SR
Sbjct: 370 IRVREYDDRSRSRSRSYSRSRSYSRSRSPKSVSRSPSPVDERSISRSRTPVSSPSR 425
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/181 (80%), Positives = 170/181 (93%), Gaps = 1/181 (0%)
Query: 4 RASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIR 63
R+SRT+YVGNLPGD+RERE++DLF+KYGPI IDLK+PPRPPGY F+EFE+ RDAEDAIR
Sbjct: 1 RSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIR 60
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GRDGY+FDG+RLRVE+AHGGRG SSDR+SS+ GRG VSRRSEYRV++TGLPSSASWQ
Sbjct: 61 GRDGYNFDGYRLRVEIAHGGRGPPSSDRYSSY-GGRGGSVSRRSEYRVIITGLPSSASWQ 119
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
DLKDHMRRAGDVCF+QVFR+G+GTTGIVD+TNYDDMK+AIKKLDDSEFRN FSR+Y+RV+
Sbjct: 120 DLKDHMRRAGDVCFAQVFREGNGTTGIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIRVK 179
Query: 184 E 184
E
Sbjct: 180 E 180
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 192/240 (80%), Positives = 205/240 (85%), Gaps = 4/240 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRT+YVGNLPGDIREREVEDLF KYG I HIDLK+PPRPPGYAFVEFE+A+DAED
Sbjct: 1 MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRS-EYRVLVTGLPS 118
AIRGRDGYDFDGHRLRVE AHGGRG SSS DR++SHS+GRG R EYRVLV+GLPS
Sbjct: 61 AIRGRDGYDFDGHRLRVEPAHGGRGHSSSRDRYNSHSNGRGGRGVSRRSEYRVLVSGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFSQVF DG GTTGIVDYTNYDDMK+AIKKLDDSEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSP 238
YVRVREYD RR S S R S R S SRSRSR RSYSR RSQSKSPK KSS+RSP
Sbjct: 181 YVRVREYDSRR--DSSRSPSRGPSHSRGRSYSRSRSRSRSYSRDRSQSKSPKGKSSQRSP 238
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 154/187 (82%), Positives = 168/187 (89%), Gaps = 2/187 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRTLYVGNLPGDIR REVEDLFYKYGPI IDLKIPP+PPGYAFVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRG-RGVSRRSEYRVLVTGLPS 118
AI RDGYDFDG+RL VELAHGGRG SSS DR+S HS G RGVSRRS+YRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AG VCFSQVFR+ G TGIVDYTNYDD+K+AI+KLDDSEFRNAFSR+
Sbjct: 152 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 211
Query: 179 YVRVREY 185
Y+RVREY
Sbjct: 212 YIRVREY 218
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 154/187 (82%), Positives = 168/187 (89%), Gaps = 2/187 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRTLYVGNLPGDIR REVEDLFYKYGPI IDLKIPP+PPGYAFVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRG-RGVSRRSEYRVLVTGLPS 118
AI RDGYDFDG+RL VELAHGGRG SSS DR+S HS G RGVSRRS+YRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AG VCFSQVFR+ G TGIVDYTNYDD+K+AI+KLDDSEFRNAFSR+
Sbjct: 152 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 211
Query: 179 YVRVREY 185
Y+RVREY
Sbjct: 212 YIRVREY 218
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 154/187 (82%), Positives = 168/187 (89%), Gaps = 2/187 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRTLYVGNLPGDIR REVEDLFYKYGPI IDLKIPP+PPGYAFVEFE+ARDA+D
Sbjct: 32 MSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQD 91
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRG-RGVSRRSEYRVLVTGLPS 118
AI RDGYDFDG+RL VELAHGGRG SSS DR+S HS G RGVSRRS+YRVLVTGLP
Sbjct: 92 AIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGLPP 151
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AG VCFSQVFR+ G TGIVDYTNYDD+K+AI+KLDDSEFRNAFSR+
Sbjct: 152 SASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFSRS 211
Query: 179 YVRVREY 185
Y+RVREY
Sbjct: 212 YIRVREY 218
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 188/256 (73%), Positives = 209/256 (81%), Gaps = 15/256 (5%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-----------SRRSEY 109
AI GRDGYDFDGHRLRVELAHGGR RSS D S + G G SRRSE+
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 119
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD GTTG+VDYT Y+DMK+A+KKLDD+
Sbjct: 120 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 179
Query: 170 EFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP 229
EFRNAFS YVRVREYD R+D S+SPS R S +S SRSR RS RS SRSRS+S+SP
Sbjct: 180 EFRNAFSNGYVRVREYDSRKD-SRSPS--RGRSYSKSRSRSRGRSVSRSRSRSRSRSRSP 236
Query: 230 KAKSSRRSPDRSRSRS 245
KAKSSRRSP +S SRS
Sbjct: 237 KAKSSRRSPAKSTSRS 252
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 194/273 (71%), Positives = 218/273 (79%), Gaps = 18/273 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-----------SRRSEY 109
AI GRDGYDFDGHRLRVELAHGGR RSS D S + G G SRRSE+
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 119
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD GTTG+VDYT Y+DMK+A+KKLDD+
Sbjct: 120 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 179
Query: 170 EFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP 229
EFRNAFS YVRVREYD R+D S+SPS R S +S SRSR RS RS SRSRS+S+SP
Sbjct: 180 EFRNAFSNGYVRVREYDSRKD-SRSPS--RGRSYSKSRSRSRGRSVSRSRSRSRSRSRSP 236
Query: 230 KAKSSRRSPDRSRSRSA---SRSRSGSKPRSLS 259
KAKSSRRSP +S SRS S+SRS S R ++
Sbjct: 237 KAKSSRRSPAKSTSRSPGPRSKSRSPSPRRWIT 269
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/267 (72%), Positives = 215/267 (80%), Gaps = 18/267 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-----------SRRSEY 109
AI GRDGYDFDGHRLRVELAHGGR RSS D S + G G SRRSE+
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 119
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD GTTG+VDYT Y+DMK+A+KKLDD+
Sbjct: 120 RVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 179
Query: 170 EFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP 229
EFRNAFS YVRVREYD R+D S+SPS R S +S SRSR RS RS SRSRS+S+SP
Sbjct: 180 EFRNAFSNGYVRVREYDSRKD-SRSPS--RGRSYSKSRSRSRGRSVSRSRSRSRSRSRSP 236
Query: 230 KAKSSRRSPDRSRSRSA---SRSRSGS 253
KAKSSRRSP +S SRS S+SRS S
Sbjct: 237 KAKSSRRSPAKSTSRSPGPRSKSRSPS 263
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/260 (72%), Positives = 209/260 (80%), Gaps = 19/260 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---------------SR 105
AI GRDGYDFDGHRLRVELAHGGR RSS D S + G G SR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSR 119
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
RSE+RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD GTTG+VDYT Y+DMK+A+KK
Sbjct: 120 RSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKK 179
Query: 166 LDDSEFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQ 225
LDD+EFRNAFS YVRVREYD R+D S+SPS R S +S SRSR RS RS SRSRS+
Sbjct: 180 LDDTEFRNAFSNGYVRVREYDSRKD-SRSPS--RGRSYSKSRSRSRGRSVSRSRSRSRSR 236
Query: 226 SKSPKAKSSRRSPDRSRSRS 245
S+SPKAKSSRRSP +S SRS
Sbjct: 237 SRSPKAKSSRRSPAKSTSRS 256
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/277 (70%), Positives = 218/277 (78%), Gaps = 22/277 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---------------SR 105
AI GRDGYDFDGHRLRVELAHGGR RSS D S + G G SR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSR 119
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
RSE+RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD GTTG+VDYT Y+DMK+A+KK
Sbjct: 120 RSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKK 179
Query: 166 LDDSEFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQ 225
LDD+EFRNAFS YVRVREYD R+D S+SPS R S +S SRSR RS RS SRSRS+
Sbjct: 180 LDDTEFRNAFSNGYVRVREYDSRKD-SRSPS--RGRSYSKSRSRSRGRSVSRSRSRSRSR 236
Query: 226 SKSPKAKSSRRSPDRSRSRSA---SRSRSGSKPRSLS 259
S+SPKAKSSRRSP +S SRS S+SRS S R ++
Sbjct: 237 SRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRWIT 273
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/271 (71%), Positives = 215/271 (79%), Gaps = 22/271 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---------------SR 105
AI GRDGYDFDGHRLRVELAHGGR RSS D S + G G SR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSR 119
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
RSE+RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD GTTG+VDYT Y+DMK+A+KK
Sbjct: 120 RSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKK 179
Query: 166 LDDSEFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQ 225
LDD+EFRNAFS YVRVREYD R+D S+SPS R S +S SRSR RS RS SRSRS+
Sbjct: 180 LDDTEFRNAFSNGYVRVREYDSRKD-SRSPS--RGRSYSKSRSRSRGRSVSRSRSRSRSR 236
Query: 226 SKSPKAKSSRRSPDRSRSRSA---SRSRSGS 253
S+SPKAKSSRRSP +S SRS S+SRS S
Sbjct: 237 SRSPKAKSSRRSPAKSTSRSPGPRSKSRSPS 267
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 158/184 (85%), Positives = 163/184 (88%), Gaps = 2/184 (1%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SRASRTLYVGNLPGDIR REVEDLFYKYGPI IDLKIPPRPPGYAFVEFEEARDAEDAI
Sbjct: 2 SRASRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAI 61
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRH--SSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
RGRDGY+FDG RLRVELAHGGR SS H S S RG S+RS+YRVLVTGLPSSA
Sbjct: 62 RGRDGYNFDGCRLRVELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRSDYRVLVTGLPSSA 121
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCFSQVFRD G TGIVDYTNYDDMK+AIKKLDDSEFRNAFSRAY+
Sbjct: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYI 181
Query: 181 RVRE 184
RVRE
Sbjct: 182 RVRE 185
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 193/271 (71%), Positives = 215/271 (79%), Gaps = 22/271 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---------------SR 105
AI GRDGYDFDGHRLRVELAHGGR RSS D S + G G SR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSR 119
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
RSE+RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD GTTG+VDYT Y+DMK+A+KK
Sbjct: 120 RSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKK 179
Query: 166 LDDSEFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQ 225
LDD+EFRNAFS YVRVREYD R+D S+SPS R S +S SRSR RS RS SRSRS+
Sbjct: 180 LDDTEFRNAFSNGYVRVREYDSRKD-SRSPS--RGRSYSKSRSRSRGRSVSRSRSRSRSR 236
Query: 226 SKSPKAKSSRRSPDRSRSRSA---SRSRSGS 253
S+SPKAKSSRRSP +S SRS S+SRS S
Sbjct: 237 SRSPKAKSSRRSPAKSTSRSPGPRSKSRSPS 267
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 197/282 (69%), Positives = 221/282 (78%), Gaps = 24/282 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---------------SR 105
AI+GRDGYDFDGHRLRVELAHGGR RSS D S + G G SR
Sbjct: 61 AIQGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSR 119
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
RSE+RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RDG GTTG+VDYT Y+DMK+A+KK
Sbjct: 120 RSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDGRGTTGVVDYTCYEDMKYAVKK 179
Query: 166 LDDSEFRNAFSRAYVRVREYDHRRD-----GSQSPSRGRSYSRGRSESRSRSRSRGRSYS 220
LDD+EFRNAFS YVRVREYD R+D +S SR RS SR R S SRSRSR RS S
Sbjct: 180 LDDTEFRNAFSHGYVRVREYDSRKDSRSPSRGRSYSRSRSRSRSRGRSLSRSRSRSRSRS 239
Query: 221 RSRSQSKSPKAKSSRRSPDRSRSRSA---SRSRSGSKPRSLS 259
RSRS+S+SPKAKSSRRSP +S SRS S+SRS S R ++
Sbjct: 240 RSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRWIT 281
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 156/187 (83%), Positives = 167/187 (89%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSS 119
AI GRDGY+FDGHRLRVELAHGGRG+SSS H S S R G+SR SEYRVLVTGLP S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFSQVFR G TGIVDYTNYDDMK+AI+KLDDS F+N FSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAY 180
Query: 180 VRVREYD 186
+RVREY+
Sbjct: 181 IRVREYE 187
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 150/186 (80%), Positives = 168/186 (90%), Gaps = 1/186 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPG+AFVEFE+ RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AIRGRDGY+FDG+RLRVELAHGGRG SSS ++S GR GVSR +EYRVLVTGLPSSA
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSS-FNNSGGGGRRGGVSRHTEYRVLVTGLPSSA 185
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR AGDVC+S+V+R+G GT GIVDYTNYDDMK+AI+KLDDSEF+NAFS+AY+
Sbjct: 186 SWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYI 245
Query: 181 RVREYD 186
RV+EYD
Sbjct: 246 RVKEYD 251
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/187 (83%), Positives = 167/187 (89%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSS 119
AI GRDGY+FDGHRLRVELAHGGRG+SSS H S S R G+SR SEYRVLVTGLP S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFSQVFR G TGIVDYTNYDDMK+AI+KLDDS F+N FSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAY 180
Query: 180 VRVREYD 186
+RVREY+
Sbjct: 181 IRVREYE 187
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/186 (80%), Positives = 168/186 (90%), Gaps = 1/186 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPG+AFVEFE+ RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AIRGRDGY+FDG+RLRVELAHGGRG SSS ++S GR GVSR +EYRVLVTGLPSSA
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSS-FNNSGGGGRRGGVSRHTEYRVLVTGLPSSA 185
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR AGDVC+S+V+R+G GT GIVDYTNYDDMK+AI+KLDDSEF+NAFS+AY+
Sbjct: 186 SWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYI 245
Query: 181 RVREYD 186
RV+EYD
Sbjct: 246 RVKEYD 251
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/186 (80%), Positives = 168/186 (90%), Gaps = 1/186 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPG+AFVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AIRGRDGY+FDG+RLRVELAHGGRG SSS ++S GR GVSR +EYRVLVTGLPSSA
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSS-FNNSGGGGRRGGVSRHTEYRVLVTGLPSSA 119
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR AGDVC+S+V+R+G GT GIVDYTNYDDMK+AI+KLDDSEF+NAFS+AY+
Sbjct: 120 SWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYI 179
Query: 181 RVREYD 186
RV+EYD
Sbjct: 180 RVKEYD 185
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 164/186 (88%), Gaps = 1/186 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 24 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 83
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GR+GYDFDGHRLRVELAHGGRG S S S+GR RG ++R++YRV+VTGLPSSA
Sbjct: 84 AIYGRNGYDFDGHRLRVELAHGGRGPSFDRSSSYSSAGR-RGAAKRTDYRVMVTGLPSSA 142
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCFS V+R+G T GIVDYTNY+DMK AI+KLDDSEFRNAFSRAY+
Sbjct: 143 SWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYI 202
Query: 181 RVREYD 186
RVREYD
Sbjct: 203 RVREYD 208
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/187 (83%), Positives = 167/187 (89%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSS 119
AI GRDGY+FDGHRLRVELAHGGRG+SSS H S S R G+SR SEYRVLVTGLP S
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFSQVFR G TGIVDYTNYDDMK+AI+KLDDS F+N FSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAY 180
Query: 180 VRVREYD 186
+RVREY+
Sbjct: 181 IRVREYE 187
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 163/215 (75%), Positives = 173/215 (80%), Gaps = 12/215 (5%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR SRT+YVGNLPGDIR REVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
AI GRDGY FDG RLRVE AHGGRG SSS DR+S S R ++ VLVTGLPSS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSR--------DFAVLVTGLPSS 112
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS+VFRD G GIVDYTNYDDMK+AI+KLDDSEFRNAFSRAY
Sbjct: 113 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 172
Query: 180 VRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRS 214
VRV+EYD R S+SPS SR SRS SRS
Sbjct: 173 VRVKEYDSRHSYSRSPSLD---SRRSDYSRSPSRS 204
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 150/186 (80%), Positives = 168/186 (90%), Gaps = 1/186 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPG+AFVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AIRGRDGY+FDG+RLRVELAHGGRG SSS ++S GR GVSR +EYRVLVTGLPSSA
Sbjct: 61 AIRGRDGYNFDGNRLRVELAHGGRGNSSS-FNNSGGGGRRGGVSRHTEYRVLVTGLPSSA 119
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR AGDVC+S+V+R+G GT GIVDYTNYDDMK+AI+KLDDSEF+NAFS+AY+
Sbjct: 120 SWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYI 179
Query: 181 RVREYD 186
RV+EYD
Sbjct: 180 RVKEYD 185
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 163/186 (87%), Gaps = 1/186 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GR GYDFDGHRLRVELAHGGRG S S S+GR RG ++R++YRV+VTGLPSSA
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGRGPSFDRSSSYSSAGR-RGAAKRTDYRVMVTGLPSSA 119
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCFS V+R+G T GIVDYTNY+DMK AI+KLDDSEFRNAFSRAY+
Sbjct: 120 SWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYI 179
Query: 181 RVREYD 186
RVREYD
Sbjct: 180 RVREYD 185
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 163/186 (87%), Gaps = 1/186 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GR GYDFDGHRLRVELAHGGRG S S S+GR RG ++R++YRV+VTGLPSSA
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGRGPSFDRSSSYSSAGR-RGAAKRTDYRVMVTGLPSSA 119
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCFS V+R+G T GIVDYTNY+DMK AI+KLDDSEFRNAFSRAY+
Sbjct: 120 SWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYI 179
Query: 181 RVREYD 186
RVREYD
Sbjct: 180 RVREYD 185
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/183 (79%), Positives = 167/183 (91%), Gaps = 2/183 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRT+YVGNLPGD+RERE+ED+FYKYG I IDLK+PPRPPGY F+EFE+ARDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
AIRGRDGY+FDG+RLRVE+AHGGRG + DR ++ S GR GVSRRSEYRV+VTGLPSS
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPAVDRSAAESGGRAGGVSRRSEYRVMVTGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCF+QVFRD +GT GIVD+TNYDDMK+AI+KLDDSEFRN FSR++
Sbjct: 121 ASWQDLKDHMRRAGDVCFAQVFRD-AGTMGIVDFTNYDDMKYAIRKLDDSEFRNPFSRSF 179
Query: 180 VRV 182
+RV
Sbjct: 180 IRV 182
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/187 (80%), Positives = 164/187 (87%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M R S T+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MGRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
AI GRDGYDFDG+RLRVELAHGG+ +S S DR SS SSGR GVSRRSEYRV+V GLPSS
Sbjct: 61 AIYGRDGYDFDGYRLRVELAHGGKAQSYSYDRPSSFSSGRRGGVSRRSEYRVMVDGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLD +EFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTNYDDMKYAIRKLDGTEFRNAFSRAY 180
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 181 IRVREYD 187
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/185 (78%), Positives = 165/185 (89%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPG+AFVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI+GRDGY+FDG+RLRVELAHGGR SSS +S GR GVSR +EYRVLVTGLPSSA
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHGGGGRRGGVSRHTEYRVLVTGLPSSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AI+KLDD+EF+NAFSRA +
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPI 180
Query: 181 RVREY 185
RV+EY
Sbjct: 181 RVKEY 185
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 165/188 (87%), Gaps = 2/188 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGR--SSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
A GRDGY+FDGHRLRVE AHGGRG SS DR S+ G RGVSR SEYRVLVTGLPS
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AIKKLDDSEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 179 YVRVREYD 186
++RV+EYD
Sbjct: 181 HIRVKEYD 188
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/193 (78%), Positives = 166/193 (86%), Gaps = 4/193 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPGYAFVEFE+ARDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS----DRHSSHSSGRGRGVSRRSEYRVLVTGL 116
AI GRDGY+FDGHRLRVE AHGGRG +SS G RGVSR SEYRVLVTGL
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNTSSYDRSSGFGGGGGGARRGVSRHSEYRVLVTGL 120
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
PSSASWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AIKKLDD+EFRNAF
Sbjct: 121 PSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFG 180
Query: 177 RAYVRVREYDHRR 189
RAY+RV+EYD +R
Sbjct: 181 RAYIRVKEYDGKR 193
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/185 (78%), Positives = 164/185 (88%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPG+AFVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGY+FDG+RLRVELAHGGR SSS +S GR GVSR +EYRVLVTGLPSSA
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHGGRANSSSLPNSYGGGGRRGGVSRHTEYRVLVTGLPSSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AI+KLDD+EF+NAFSRA +
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPI 180
Query: 181 RVREY 185
RV+EY
Sbjct: 181 RVKEY 185
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 152/193 (78%), Positives = 166/193 (86%), Gaps = 4/193 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPGYAFVEFE+ARDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS----DRHSSHSSGRGRGVSRRSEYRVLVTGL 116
AI GRDGY+FDGHRLRVE AHGGRG +SS G RGVSR SEYRVLVTGL
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNTSSYDRSSGFGGGGGGARRGVSRHSEYRVLVTGL 120
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
PSSASWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AIKKLDD+EFRNAF
Sbjct: 121 PSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFG 180
Query: 177 RAYVRVREYDHRR 189
RAY+RV+EYD +R
Sbjct: 181 RAYIRVKEYDGKR 193
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 165/235 (70%), Positives = 187/235 (79%), Gaps = 8/235 (3%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R T+YVGNLPGDIREREV+DLFYKYG I IDLKIPPRPPG+AFVEFE+ DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGY+FDGHRLRVELAHGGRG SS DR SS+SS RG S+RS+YRV+VTGLPSSA
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCF+ V+R+ T GI DYTNY+DMKHAI+KLDDSEFRNAFSR Y+
Sbjct: 121 SWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYI 180
Query: 181 RVREYDHRRDGSQSPSRGRSYSRGRS--------ESRSRSRSRGRSYSRSRSQSK 227
RVREYD RR SQS S ++ S RS +S SRS +R +S RS S +K
Sbjct: 181 RVREYDARRSRSQSKSPVKARSPSRSPPVSPPRDKSISRSPARSKSLPRSCSPAK 235
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 184/256 (71%), Positives = 206/256 (80%), Gaps = 15/256 (5%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-----------SRRSEY 109
AI GRDGYDFDGHRLRVELAHGGR RSS D S + G G SRRSE+
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEF 119
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
RVLVT L SSASWQDLKDH+ + GDVCFSQV+RD GTTG+VDYT Y+DMK+A+KKLDD+
Sbjct: 120 RVLVTWLASSASWQDLKDHIAKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDT 179
Query: 170 EFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP 229
EFRNAFS YVRVREYD R+D S+SPS R S +S SRSR RS RS SRSRS+S+SP
Sbjct: 180 EFRNAFSNGYVRVREYDSRKD-SRSPS--RGRSYSKSRSRSRGRSVSRSRSRSRSRSRSP 236
Query: 230 KAKSSRRSPDRSRSRS 245
KAKSSRRSP +S SRS
Sbjct: 237 KAKSSRRSPAKSTSRS 252
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/242 (71%), Positives = 189/242 (78%), Gaps = 11/242 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRT+YVGNLPGDIR REVEDLFYK+GPI I+LKIPPRPPGYAFVEFE+ARDAED
Sbjct: 1 MSRRSSRTIYVGNLPGDIRLREVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AIR RDGY FDG RLRVELAHGGRG SSS S S RGVS+ SEYRVLVTGLP SA
Sbjct: 61 AIRYRDGYKFDGFRLRVELAHGGRGYSSSVDRYSSYSSGSRGVSKHSEYRVLVTGLPPSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCFSQVFRD G TGIV+YTNY+DMK+AI+KLDDSEFRNAFS AY+
Sbjct: 121 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYI 180
Query: 181 RVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSK----------SPK 230
RVREYD RR ++SPS S RS SRS SR R+ S+S S S SPK
Sbjct: 181 RVREYDRRR-YTRSPSCDTRRSYSRSPSRSPYMSRSRNRSQSYSYSSKSSRRFTTFLSPK 239
Query: 231 AK 232
K
Sbjct: 240 VK 241
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 165/188 (87%), Gaps = 2/188 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGR--SSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
A GRDGY+FDGHRLRVE AHGGRG SS DR S+ G RGVSR SEYRVLVTGLPS
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AIKKLDDSEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 179 YVRVREYD 186
++RV+EYD
Sbjct: 181 HIRVKEYD 188
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/199 (74%), Positives = 169/199 (84%), Gaps = 17/199 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRT+YVGNLPGD+RERE+EDLFYKYG I IDLK+PPRPPGY F+EFE+ARDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRG--RSSSDRHSSH--------------SSGRGRGVS 104
AIRGRDGY+FDG+RLRVE+AHGGRG +S DR+S + + GR GVS
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPASVDRYSIYSSGGGRGGGGSASENGGRAGGVS 120
Query: 105 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGS-GTTGIVDYTNYDDMKHAI 163
RRSEYRV VTGLPSSASWQDLKDHMRRAGDVCF+QVFRDGS GT GIVD+TNYDDMK+AI
Sbjct: 121 RRSEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGSAGTMGIVDFTNYDDMKYAI 180
Query: 164 KKLDDSEFRNAFSRAYVRV 182
+KLDDSEFRN FSR+++RV
Sbjct: 181 RKLDDSEFRNPFSRSFIRV 199
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/189 (78%), Positives = 165/189 (87%), Gaps = 4/189 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPG+AFVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHS----SHSSGRGRGVSRRSEYRVLVTGL 116
AI GRDGY+FDG+RLRVELAHGGR SSS +S GR GVSR +EYRVLVTGL
Sbjct: 61 AIHGRDGYNFDGNRLRVELAHGGRANSSSLPNSYGGGGGGGGRRGGVSRHTEYRVLVTGL 120
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
PSSASWQDLKDHMR+AGDVCFS+V+R+G GTTGIVDYTNYDDMK+AI+KLDDSEFRNAFS
Sbjct: 121 PSSASWQDLKDHMRKAGDVCFSEVYREGDGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFS 180
Query: 177 RAYVRVREY 185
RA +RV+EY
Sbjct: 181 RAPIRVKEY 189
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 168/205 (81%), Gaps = 16/205 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLK+PPRPPGYAFVEF++ARDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---------------SR 105
AI GRDGYDFDGHRLRVELAHGGR RSS D S + G G SR
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR-RSSDDTRGSFNGGGRGGGRGRGDGRGDGGSRGPSR 119
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
RSE+RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD GTTG+VDYT Y+DMK+A+KK
Sbjct: 120 RSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKK 179
Query: 166 LDDSEFRNAFSRAYVRVREYDHRRD 190
LDD+EFRNAFS YVRVREYD R+D
Sbjct: 180 LDDTEFRNAFSNGYVRVREYDSRKD 204
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 164/186 (88%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R T+YVGNLPGDIREREV+DLFYKYG I IDLKIPPRPPG+AFVEFE+ARDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGY+FDGHRLRVELAHGGRG SS DR SS+SS RG S+RS+YRV+VTGLPSSA
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCF+ V+R+ T GI DYTNY+DMKHAI+KLDDSEFRNAFSR YV
Sbjct: 121 SWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYV 180
Query: 181 RVREYD 186
RVREYD
Sbjct: 181 RVREYD 186
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 165/188 (87%), Gaps = 2/188 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGR--SSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
A GRDGY+FDGHRLRVE AHGGRG SS DR S+ G RGVSR SEYRVLVTGLPS
Sbjct: 61 ACAGRDGYNFDGHRLRVEPAHGGRGNGGSSFDRPSNFGGGGRRGVSRHSEYRVLVTGLPS 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AIKKLDDSEFRNAFS+
Sbjct: 121 SASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG 180
Query: 179 YVRVREYD 186
++RV+EYD
Sbjct: 181 HIRVKEYD 188
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-VSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S RG VSRRS++RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSRAY
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 184 IRVREYD 190
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/185 (78%), Positives = 164/185 (88%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPG+AFVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI+GRDGY+FDG+RLRVELAHGGR SSS +S GR GVSR +EYRVLVTGLPSSA
Sbjct: 61 AIQGRDGYNFDGNRLRVELAHGGRANSSSLPNSHGGGGRRGGVSRHTEYRVLVTGLPSSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR+AGDVCFS+V+R+ GT GIVDYTNYDDMK+AI+KLDD+EF+NAFSRA +
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVYREVVGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSRAPI 180
Query: 181 RVREY 185
RV+EY
Sbjct: 181 RVKEY 185
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-VSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S RG VSRRS++RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSRAY
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 184 IRVREYD 190
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 149/192 (77%), Positives = 165/192 (85%), Gaps = 3/192 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPGYAFVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS---DRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
AI GRDGY+FDGHRLRVE AHGGRG +SS G RGVSR SEYRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
SSASWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AIKKLDD+EFRNAF R
Sbjct: 121 SSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGR 180
Query: 178 AYVRVREYDHRR 189
AY+RV+EY+ +R
Sbjct: 181 AYIRVKEYNGKR 192
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 149/192 (77%), Positives = 165/192 (85%), Gaps = 3/192 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPGYAFVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS---DRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
AI GRDGY+FDGHRLRVE AHGGRG +SS G RGVSR SEYRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
SSASWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AIKKLDD+EFRNAF R
Sbjct: 121 SSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGR 180
Query: 178 AYVRVREYDHRR 189
AY+RV+EY+ +R
Sbjct: 181 AYIRVKEYNGKR 192
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 299 bits (766), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-VSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S RG VSRRS++RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSRAY
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 184 IRVREYD 190
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 164/186 (88%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R T+YVGNLPGDIREREV+DLFYKYG I IDLKIPPRPPG+AFVEFE+ARDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGY+FDGHRLRVELAHGGRG SS DR SS+SS RG S+RS+YRV+VTGLPSSA
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCF+ V+R+ T GI DYTNY+DMKHAI+KLDDSEFRNAFSR YV
Sbjct: 121 SWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYV 180
Query: 181 RVREYD 186
RVREYD
Sbjct: 181 RVREYD 186
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 162/187 (86%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M S T+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MGRTNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S +R S+SSGR GVSRRSEYRVLV GLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYQYERPRSYSSGRRGGVSRRSEYRVLVDGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ GIVDYTNYDDMK+AI+KLD +EFRNAFSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGAIVGIVDYTNYDDMKYAIRKLDGTEFRNAFSRSY 180
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 181 IRVREYD 187
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-VSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S RG VSRRS++RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSRAY
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 184 IRVREYD 190
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 164/186 (88%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R T+YVGNLPGDIREREV+DLFYKYG I IDLKIPPRPPG+AFVEFE+ARDAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGY+FDGHRLRVELAHGGRG SS DR SS+SS RG S+RS+YRV+VTGLPSSA
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCF+ V+R+ T GI DYTNY+DMKHAI+KLDDSEFRNAFSR YV
Sbjct: 121 SWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYV 180
Query: 181 RVREYD 186
RVREYD
Sbjct: 181 RVREYD 186
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-VSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S RG VSRRS++RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 180
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 181 IRVREYD 187
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/194 (77%), Positives = 166/194 (85%), Gaps = 8/194 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPGYAFVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRS--SSDRHSSHSSGRGRG------VSRRSEYRVL 112
A GRDGY+FDG+RLRVE AHGGRG S DR SS G G G VSR ++YRVL
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRSSSFGGGGGGGGGGRRGVSRHTDYRVL 120
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
VTGLPSSASWQDLKDHMRRAGDVCFS+V+R+GSGTTGIVDYTNYDDMK+AIKKLDD+EF+
Sbjct: 121 VTGLPSSASWQDLKDHMRRAGDVCFSEVYREGSGTTGIVDYTNYDDMKYAIKKLDDTEFK 180
Query: 173 NAFSRAYVRVREYD 186
NAFS+ Y+RV+EYD
Sbjct: 181 NAFSKGYIRVKEYD 194
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 139/188 (73%), Positives = 161/188 (85%), Gaps = 3/188 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR++R LYVGNLP D RER++ED+F+KYGP+ IDLK PPRPPGY F+EFE ARDAED
Sbjct: 1 MGSRSNRILYVGNLPVDFRERDIEDIFHKYGPVVKIDLKFPPRPPGYCFIEFENARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR---RSEYRVLVTGLP 117
AIRGRDGYD DGHRLRVELAHGGRG S DR+SS SSG GR R +YRV ++GLP
Sbjct: 61 AIRGRDGYDIDGHRLRVELAHGGRGALSVDRYSSFSSGGGRRNGRLQSHCDYRVTISGLP 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
SSASWQDLKDHMRRAGDV F+QVFRD +GTTG+VDYTNYDDMK+AI+KLDD+EF+N FSR
Sbjct: 121 SSASWQDLKDHMRRAGDVTFAQVFRDSNGTTGVVDYTNYDDMKYAIRKLDDTEFKNPFSR 180
Query: 178 AYVRVREY 185
+Y+RV+EY
Sbjct: 181 SYIRVKEY 188
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/197 (74%), Positives = 166/197 (84%), Gaps = 15/197 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRT+YVGNLPGD+RERE+EDLFYKYG I IDLK+PPRPPGY F+EFE+ RDAED
Sbjct: 1 MSSRASRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSH-------------SSGRGRGVSRR 106
AIRGRDGY+FDG+RLRVE+AHGGRG + DR+S + GR GVSRR
Sbjct: 61 AIRGRDGYNFDGNRLRVEIAHGGRGPPPAVDRYSIYSSGGRGGGGSAADCGGRAGGVSRR 120
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDG-SGTTGIVDYTNYDDMKHAIKK 165
SEYRV VTGLPSSASWQDLKDHMRRAGDVCF+QVFRDG SGT GIVD+TNYDDMK+AI+K
Sbjct: 121 SEYRVTVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDGTSGTMGIVDFTNYDDMKYAIRK 180
Query: 166 LDDSEFRNAFSRAYVRV 182
LDDSEFRN FSR+++RV
Sbjct: 181 LDDSEFRNPFSRSFIRV 197
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 4 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 63
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-VSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S RG VSRRS++RV+VTGLPSS
Sbjct: 64 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 123
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSRAY
Sbjct: 124 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 183
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 184 IRVREYD 190
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-VSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S RG VSRRS++RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 180
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 181 IRVREYD 187
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-VSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S RG VSRRS++RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSACRGGVSRRSDFRVMVTGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 180
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 181 IRVREYD 187
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/192 (77%), Positives = 165/192 (85%), Gaps = 3/192 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPGYAFVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS---DRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
AI GRDGY+FDGHRLRVE AHGGRG +SS G RGVSR SEYRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
SSASWQDLKDHMR+AGDVCFS+V+R+G GT GIVDYTNYDDMK+AIKKLDD+EFRNAF R
Sbjct: 121 SSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGR 180
Query: 178 AYVRVREYDHRR 189
AY+RV+EY+ +R
Sbjct: 181 AYIRVKEYNGKR 192
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 165/187 (88%), Gaps = 1/187 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S R GVSRRS++RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRAY 180
Query: 180 VRVREYD 186
+RVREYD
Sbjct: 181 IRVREYD 187
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/186 (78%), Positives = 162/186 (87%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R T+YVGNLPGDIREREV+DLFYKYG I IDLKIPPRPPG+AFVEFE+ DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGY+FDGHRLRVELAHGGRG SS DR SS+SS RG S+RS+YRV+VTGLPSSA
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCF+ V+R+ T GI DYTNY+DMKHAI+KLDDSEFRNAFSR Y+
Sbjct: 121 SWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYI 180
Query: 181 RVREYD 186
RVREYD
Sbjct: 181 RVREYD 186
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/186 (79%), Positives = 163/186 (87%), Gaps = 1/186 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R T+YVGNLPGDIREREV+DLFYKYG I IDLKIPPRPPG+AFVEFE+A DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDA-DAED 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGY+FDGHRLRVELAHGGRG SS DR SS+SS RG S+RS+YRV+VTGLPSSA
Sbjct: 60 AIYGRDGYNFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 119
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCF+ V+R+ T GI DYTNY+DMKHAI+KLDDSEFRNAFSR YV
Sbjct: 120 SWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYV 179
Query: 181 RVREYD 186
RVREYD
Sbjct: 180 RVREYD 185
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 152/188 (80%), Positives = 165/188 (87%), Gaps = 2/188 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R+SRT+YVGNLPGD+R REVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ARDAED
Sbjct: 1 MSGRSSRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS--DRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
AI+ RDGY+FDG RLRVELAHGGRG SSS S RGVSRRS+YRVLVTGLP
Sbjct: 61 AIQYRDGYNFDGFRLRVELAHGGRGYSSSVDRYSSYSGGSGSRGVSRRSDYRVLVTGLPP 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SASWQDLKDHMR+AGDVCFSQVFR+ G TGIVDYTNYDDMK+AI+KLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRA 180
Query: 179 YVRVREYD 186
++RVREYD
Sbjct: 181 FIRVREYD 188
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 149/194 (76%), Positives = 164/194 (84%), Gaps = 8/194 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYK--------YGPIAHIDLKIPPRPPGYAFVEF 52
M+ R T+YVGNLPGDIREREV+DLFYK YG I IDLKIPPRPPG+AFVEF
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKGRQCGLRMYGRIVEIDLKIPPRPPGFAFVEF 60
Query: 53 EEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVL 112
E+ARDAEDAI GRDGY+FDGHRLRVELAHGGRG SS DR SS+SS RG S+RS+YRV+
Sbjct: 61 EDARDAEDAIYGRDGYNFDGHRLRVELAHGGRGTSSFDRSSSYSSAGQRGASKRSDYRVM 120
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ T GI DYTNY+DMKHAI+KLDDSEFR
Sbjct: 121 VTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFR 180
Query: 173 NAFSRAYVRVREYD 186
NAFSR YVRVREYD
Sbjct: 181 NAFSRTYVRVREYD 194
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 292 bits (748), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 146/186 (78%), Positives = 162/186 (87%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R T+YVGNLPGDIREREV+DLFYKYG I IDLKIPPRPPG+AFVEFE+ DAED
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGY+FDGHRLRVELAHGGRG SS DR SS+SS RG S+RS+YRV+VTGLPSSA
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHGGRGPSSFDRSSSYSSAGQRGASKRSDYRVMVTGLPSSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCF+ V+R+ T GI DYTNY+DMKHAI+KLDDSEFRNAFSR Y+
Sbjct: 121 SWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYEDMKHAIRKLDDSEFRNAFSRTYI 180
Query: 181 RVREYD 186
RVREYD
Sbjct: 181 RVREYD 186
>gi|255542752|ref|XP_002512439.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548400|gb|EEF49891.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 444
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/278 (60%), Positives = 189/278 (67%), Gaps = 17/278 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSS ASRTLYVGNLPGDIR REV+DLFYKYG I +DL+ PPR PGYAFV+FE+A +AE+
Sbjct: 1 MSSCASRTLYVGNLPGDIRWREVKDLFYKYGLIVRVDLRNPPRTPGYAFVQFEDACNAEE 60
Query: 61 AIRGRDGYDFDGHRLRVELA----------HGGRGRSSSDRHSSHSSG--RGRGVSRRSE 108
AIRGRDGY+F+G RLRVELA HGGR S RH + SG G S+ S+
Sbjct: 61 AIRGRDGYNFNGCRLRVELAYGGRKHSTPGHGGRKHSFPGRHYNTCSGISENHGPSKHSD 120
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDD 168
+RVLVTGLPSSASWQDLKDHMR+AGDVCFS+VF G TGIVDY NYDDMKHAIKKLDD
Sbjct: 121 HRVLVTGLPSSASWQDLKDHMRQAGDVCFSRVFPGRGGKTGIVDYKNYDDMKHAIKKLDD 180
Query: 169 SEFRNAFSRAYVRVREYDHRRDGSQSPSRG----RSYSRGRSESRSRSRSRGRSYSRSRS 224
SEFRNAFSR+YVRVR+ D RR SQSPS G RS
Sbjct: 181 SEFRNAFSRSYVRVRKDDSRRSYSQSPSHGTRDRSKSRSRSRSGSQSRSRSRSRNCSERS 240
Query: 225 QSKSPKAKSSRRSPDRSRSRSAS-RSRSGSKPRSLSRY 261
+SKSP AK S RS S RS S S +G PRS S +
Sbjct: 241 RSKSPGAKYSHRSLSVSPGRSVSPHSHAGLSPRSSSPF 278
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/188 (77%), Positives = 161/188 (85%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR +RT+YVGNLPGDIR REVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGYDFDG RLRVE+AHGGR SSS S S R SRRS YRVLVTGLP SA
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRGSSSVDRYSSSYTGSRAPSRRSAYRVLVTGLPPSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR+AGDVCFS+VFRD +G+VDY+NYDDMK+AI+KLDD+EFRNAFSRAY+
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFRDRGRMSGVVDYSNYDDMKYAIRKLDDTEFRNAFSRAYI 180
Query: 181 RVREYDHR 188
RVREY+ R
Sbjct: 181 RVREYESR 188
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 150/186 (80%), Positives = 158/186 (84%), Gaps = 2/186 (1%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SRASRTLYVGNLPGDIR REVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+A DA+ AI
Sbjct: 2 SRASRTLYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAI 61
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSS--SDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
RG DGY+FD RLRVELAHGGR SS S S RG + S+YRVLV+GLPSSA
Sbjct: 62 RGLDGYNFDACRLRVELAHGGRRHSSPVDRYSSYSGSSGSRGPPKHSDYRVLVSGLPSSA 121
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCFSQVFRD G TGIVDYTNYDDMK+AIKKLDDSEFRNAFSRAY+
Sbjct: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYI 181
Query: 181 RVREYD 186
RVREYD
Sbjct: 182 RVREYD 187
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/191 (74%), Positives = 166/191 (86%), Gaps = 6/191 (3%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR +RTLYVGNLPGD+RE E+EDLFYKYG I +DLK+PPRPPGY F+EFE+ARDAED
Sbjct: 1 MSSRMTRTLYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSS-----GRGRGVSRRSEYRVLVT 114
AIRGRDGY+FDGHR+RVE AHGGR SSS R SS+SS G GV+R ++YRVLVT
Sbjct: 61 AIRGRDGYNFDGHRIRVEFAHGGRRTSSSLGRPSSYSSIAGGRGGRGGVTRHTDYRVLVT 120
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
GLPSSASWQDLKDHMRRAGDVC+++VFRD +GT G VDYTN +DMK+AI+KLDDSEFRNA
Sbjct: 121 GLPSSASWQDLKDHMRRAGDVCYAEVFRDSNGTRGTVDYTNLEDMKYAIRKLDDSEFRNA 180
Query: 175 FSRAYVRVREY 185
FSR+Y++V+EY
Sbjct: 181 FSRSYIQVKEY 191
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/193 (77%), Positives = 163/193 (84%), Gaps = 13/193 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLKIPPRPPGYAFVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV------------SRRSE 108
AI GRDGYDFDGHRLRVELAHGGR RSS D S+S G G SRRSE
Sbjct: 61 AIYGRDGYDFDGHRLRVELAHGGR-RSSHDARGSYSGGGRGGRDGGDGGVRGRGPSRRSE 119
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDD 168
YRV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMK+AIKKLDD
Sbjct: 120 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKKLDD 179
Query: 169 SEFRNAFSRAYVR 181
+EFRNAFS YVR
Sbjct: 180 TEFRNAFSHGYVR 192
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/186 (74%), Positives = 157/186 (84%), Gaps = 1/186 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R RT+YVGNLP DIRERE+EDLF KYGPI IDLKIPPRPP YAFVEFE+ RDA+D
Sbjct: 1 MSRRNGRTIYVGNLPEDIREREIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGYDFDG +LRVELAHGG+G S DR +S++S RG RRS+YRV+VTGLPSSA
Sbjct: 61 AIYGRDGYDFDGCKLRVELAHGGKG-PSFDRPNSYTSSGRRGALRRSDYRVIVTGLPSSA 119
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMRRAGDVCFS V+ TGIV++ NY+DMKHAI+KLDDSEFRNAFSR Y+
Sbjct: 120 SWQDLKDHMRRAGDVCFSDVYPGAGAITGIVEFPNYEDMKHAIRKLDDSEFRNAFSRTYI 179
Query: 181 RVREYD 186
RVREY+
Sbjct: 180 RVREYN 185
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/188 (75%), Positives = 159/188 (84%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR +RT+YVGNLPGDIR+ EVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGYDFDG RLRVE+AHGGR S S S S R SRRS+YRVLVTGLP SA
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR+AGDVCFS+VF D G +G+VDY+NYDDMK+AI+KLD +EFRNAFS AY+
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180
Query: 181 RVREYDHR 188
RVREY+ R
Sbjct: 181 RVREYESR 188
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/188 (75%), Positives = 159/188 (84%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR +RT+YVGNLPGDIR+ EVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGYDFDG RLRVE+AHGGR S S S S R SRRS+YRVLVTGLP SA
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR+AGDVCFS+VF D G +G+VDY+NYDDMK+AI+KLD +EFRNAFS AY+
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180
Query: 181 RVREYDHR 188
RVREY+ R
Sbjct: 181 RVREYESR 188
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/188 (75%), Positives = 159/188 (84%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR +RT+YVGNLPGDIR+ EVEDLFYKYGPI IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GRDGYDFDG RLRVE+AHGGR S S S S R SRRS+YRVLVTGLP SA
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR+AGDVCFS+VF D G +G+VDY+NYDDMK+AI+KLD +EFRNAFS AY+
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180
Query: 181 RVREYDHR 188
RVREY+ R
Sbjct: 181 RVREYESR 188
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/198 (75%), Positives = 163/198 (82%), Gaps = 16/198 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLKIPPRPPGYAFVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV------------SRRSE 108
AI GRDGYDFDGH LRVELAHGGR RSS D S+S G SRRSE
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSE 119
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDD 168
YRV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMK+A LDD
Sbjct: 120 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDD 176
Query: 169 SEFRNAFSRAYVRVREYD 186
+EFRNAFS YVRVREYD
Sbjct: 177 TEFRNAFSHEYVRVREYD 194
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/234 (66%), Positives = 181/234 (77%), Gaps = 8/234 (3%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLP DIRE EVEDLFYKYG I I+LKIPPRPP Y FVEFE RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR--------GVSRRSEYRVL 112
AIRGRDGY+FDG RLRVELAHGGRG+SSSDR + G +SR SE+RV+
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGSGGGGSGSGGRYCISRHSEFRVI 120
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
V GLPSSASWQDLKDHMR+AGDVCF++V RD GT GIVDYTNY+DMK+AI+KLDD+EFR
Sbjct: 121 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDTEFR 180
Query: 173 NAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQS 226
N ++RAY+RV+ Y++ S+S SR RS S R+ S+S RS RS S+SRS S
Sbjct: 181 NPWARAYIRVKMYENSPSRSRSRSRSRSRSPRRNRSKSLERSPSRSVSKSRSAS 234
>gi|357516359|ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 273
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 172/220 (78%), Positives = 189/220 (85%), Gaps = 5/220 (2%)
Query: 29 KYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSS 88
KYG I HIDLK+PPRPPGYAFVEFE+ +DAEDAIRGRDGYDFDGHRLRVE AHGGRG SS
Sbjct: 2 KYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAHGGRGNSS 61
Query: 89 S-DRHSSHSSGRGRGVSRRS-EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSG 146
S DR+SSHS+GRG R EYRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF DG G
Sbjct: 62 SRDRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRG 121
Query: 147 TTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRS 206
TTGIVDYTNYDDMK+AIKKLDDSEFRNAFS++YVRVREYD RRD S+SP RG S+SRGRS
Sbjct: 122 TTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGRS 180
Query: 207 ESRSRSRSRGRSYSRS--RSQSKSPKAKSSRRSPDRSRSR 244
SRSRSRSR S S S S+SKSPK KSS+RSP +S ++
Sbjct: 181 YSRSRSRSRSHSRSYSPGHSRSKSPKGKSSQRSPAKSPAK 220
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 160/200 (80%), Gaps = 14/200 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR SRT+YVGNLP DIRE E+EDLFYKYG I I+LK+PPRPP Y FVEF+ ARDAED
Sbjct: 108 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 167
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR--------------GVSRR 106
AIRGRDGY+FDG RLRVELAHGGRG SSSDR G G GVSR
Sbjct: 168 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 227
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
SE+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTNYDDMK+AI+KL
Sbjct: 228 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKL 287
Query: 167 DDSEFRNAFSRAYVRVREYD 186
DD+EFRN ++R+Y+RVR+Y+
Sbjct: 288 DDTEFRNPWARSYIRVRKYE 307
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/167 (86%), Positives = 150/167 (89%), Gaps = 3/167 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED
Sbjct: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGR---SSSDRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
AIRGRDGYDFDGHRLRVELAHGGRG +S GVSRRSEYRV+VTGLP
Sbjct: 61 AIRGRDGYDFDGHRLRVELAHGGRGHSSSDRHSSYSGSGGRGRGGVSRRSEYRVVVTGLP 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNY+DMK+A+K
Sbjct: 121 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAVK 167
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/195 (72%), Positives = 158/195 (81%), Gaps = 9/195 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIRER VEDLFYKYG I IDLK+PPRPPGYAFVEFE+ RDAED
Sbjct: 1 MSRRWSRTIYVGNLPGDIRERAVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRG---------RSSSDRHSSHSSGRGRGVSRRSEYRV 111
A GRDGY+FDG+RLRVE AHGGRG S + RGVSR ++YRV
Sbjct: 61 ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRSGSFGGGGGAGGGSGRRGVSRHTDYRV 120
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
LVTGLPSSASWQDLKDHMRRAGDVCFS+V+R+G GT GI DYTNYDDMK+AIKKLDD+EF
Sbjct: 121 LVTGLPSSASWQDLKDHMRRAGDVCFSEVYREGGGTIGIADYTNYDDMKYAIKKLDDTEF 180
Query: 172 RNAFSRAYVRVREYD 186
+NAFS+ Y+RV+EYD
Sbjct: 181 KNAFSKGYIRVKEYD 195
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 161/200 (80%), Gaps = 14/200 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SR++YVGNLPGDIRE E+EDLFYKYG I I+LK+PPRPP Y FVEFE +RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDLFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR--------------GVSRR 106
AI+GRDGY+FDG RLRVELAHGGRG+SSSDR + G G GVSR
Sbjct: 61 AIKGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGGGGGGYGGGGGGGGSARFGVSRH 120
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
SE+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTNYDDMK+AI+KL
Sbjct: 121 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKL 180
Query: 167 DDSEFRNAFSRAYVRVREYD 186
DD+EFRN ++R ++RV++Y+
Sbjct: 181 DDTEFRNPWARGFIRVKKYE 200
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 160/200 (80%), Gaps = 14/200 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR SRT+YVGNLP DIRE E+EDLFYKYG I I+LK+PPRPP Y FVEF+ ARDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR--------------GVSRR 106
AIRGRDGY+FDG RLRVELAHGGRG SSSDR G G GVSR
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 120
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
SE+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTNYDDMK+AI+KL
Sbjct: 121 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKL 180
Query: 167 DDSEFRNAFSRAYVRVREYD 186
DD+EFRN ++R+Y+RVR+Y+
Sbjct: 181 DDTEFRNPWARSYIRVRKYE 200
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 160/200 (80%), Gaps = 14/200 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR SRT+YVGNLP DIRE E+EDLFYKYG I I+LK+PPRPP Y FVEF+ ARDAED
Sbjct: 1 MSSRFSRTIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR--------------GVSRR 106
AIRGRDGY+FDG RLRVELAHGGRG SSSDR G G GVSR
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRH 120
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
SE+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTNYDDMK+AI+KL
Sbjct: 121 SEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKYAIRKL 180
Query: 167 DDSEFRNAFSRAYVRVREYD 186
DD+EFRN ++R+Y+RVR+Y+
Sbjct: 181 DDTEFRNPWARSYIRVRKYE 200
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/181 (78%), Positives = 157/181 (86%), Gaps = 1/181 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S R GVSRRS++RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+AI+KLDDS+FRNAFSR
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFSRCS 180
Query: 180 V 180
+
Sbjct: 181 I 181
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/193 (71%), Positives = 158/193 (81%), Gaps = 7/193 (3%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLP DIRE E+EDLFYKYG I I+LK+PPRPP Y FVEF+ ARDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-------VSRRSEYRVLV 113
AIRGRDGY+FDG RLRVELAHGGRG SSSDR G G +SR SE+RV+V
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GLPSSASWQDLKDHMR+AGDVCF++V RD GT GIVDYTNYDDMK+AI+KLDD+EFRN
Sbjct: 121 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDAEFRN 180
Query: 174 AFSRAYVRVREYD 186
++RAY+RVR+Y+
Sbjct: 181 PWARAYIRVRKYE 193
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/199 (69%), Positives = 160/199 (80%), Gaps = 13/199 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLP DIRE E+EDLFYKYG I I+LK+PPRPP Y FVEF+ ARDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDR-------------HSSHSSGRGRGVSRRS 107
AIRGRDGY+FDG RLRVELAHGGRG SSSDR S + G G+SR S
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGGGGGSGAGGGRFGISRHS 120
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
E+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT GIVDYTNYDDMK+AI+KLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLD 180
Query: 168 DSEFRNAFSRAYVRVREYD 186
D+EFRN ++RAY+RVR+Y+
Sbjct: 181 DTEFRNPWARAYIRVRKYE 199
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/289 (52%), Positives = 183/289 (63%), Gaps = 18/289 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SR++YVGNLPGDIRE E+ED+FYKYG I I+LK+PPRPP Y FVEFE +RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-------------GVSRRS 107
AI+GRDGY+ DG RLRVELAHGGRG+SSSDR + G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
E+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTNYDDMK+AI+KLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 168 DSEFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSK 227
D+EFRN ++R ++RV++Y+
Sbjct: 181 DTEFRNPWARGFIRVKKYESS---RSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRS 237
Query: 228 SPKAKSSRRSPDRSRSRSASRSRSGS--KPRSLSRYASLLSFVMHVGIV 274
K +SP RS SRS S+SRS S K +S R SFV + +
Sbjct: 238 KSPRKDLSKSPRRSLSRSISKSRSPSPDKKKSPPRQVFCPSFVFFLSTI 286
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/195 (72%), Positives = 162/195 (83%), Gaps = 13/195 (6%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR+SRT+YVGNLPGD+RE E++DLFYKYG I IDLK+PPRPPGYAF+EF++ RDAEDAI
Sbjct: 2 SRSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAI 61
Query: 63 RGRDGYDFDGHRLRVELAH-GGRGRSS--SDRHSS----------HSSGRGRGVSRRSEY 109
+ RDGY FDGHRLRVE AH GGRG S DRHS+ G GRGVSRRSEY
Sbjct: 62 KARDGYVFDGHRLRVEFAHSGGRGHPSYGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEY 121
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
RV+VTGLPSSASWQDLKDHMR AGDVCF+QVFR+ +GT GIVD+TNYDDMK+AI+KLDD+
Sbjct: 122 RVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDT 181
Query: 170 EFRNAFSRAYVRVRE 184
EFRN FS +Y+RVRE
Sbjct: 182 EFRNPFSHSYIRVRE 196
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 141/195 (72%), Positives = 162/195 (83%), Gaps = 13/195 (6%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR+SRT+YVGNLPGD+RE E++DLFYKYG I IDLK+PPRPPGYAF+EF++ RDAEDAI
Sbjct: 2 SRSSRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAI 61
Query: 63 RGRDGYDFDGHRLRVELAH-GGRGRSS--SDRHSS----------HSSGRGRGVSRRSEY 109
+ RDGY FDGHRLRVE AH GGRG S DRHS+ G GRGVSRRSEY
Sbjct: 62 KARDGYVFDGHRLRVEFAHSGGRGHPSYGGDRHSNSYRGGGGGGGGGGGGGRGVSRRSEY 121
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
RV+VTGLPSSASWQDLKDHMR AGDVCF+QVFR+ +GT GIVD+TNYDDMK+AI+KLDD+
Sbjct: 122 RVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNAIRKLDDT 181
Query: 170 EFRNAFSRAYVRVRE 184
EFRN FS +Y+RVRE
Sbjct: 182 EFRNPFSHSYIRVRE 196
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 137/193 (70%), Positives = 157/193 (81%), Gaps = 7/193 (3%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLP DIRE E+EDLFYKYG I I+LK+PPRPP Y FVEF+ ARDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-------VSRRSEYRVLV 113
AIRGRDGY+FDG RLRVELAHGGRG SSSDR G G +SR SE+RV+V
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GLPSSASWQDLKDHMR+AGDVCF++V RD GT GIVDYTNYDDMK+AI+KLDD+EFRN
Sbjct: 121 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKYAIRKLDDTEFRN 180
Query: 174 AFSRAYVRVREYD 186
++ AY+RVR+Y+
Sbjct: 181 PWAIAYIRVRKYE 193
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 161/201 (80%), Gaps = 15/201 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLP DIRE +VEDLFYKYG I ++LKIPPRPP Y FVEFE ARDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR---------------GVSR 105
AIRGRDGY+FDG RLRVELAHGGRG SS+DR + G G G+SR
Sbjct: 61 AIRGRDGYNFDGSRLRVELAHGGRGPSSNDRRGGYGGGGGGGGGGGGGGGGGGGRLGISR 120
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
SE+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RDG GT G+VDYTN++DMK+AI+K
Sbjct: 121 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAIRK 180
Query: 166 LDDSEFRNAFSRAYVRVREYD 186
LDD+EF+N ++RAY+RV++Y+
Sbjct: 181 LDDTEFKNPWARAYIRVKQYE 201
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 159/199 (79%), Gaps = 13/199 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SR++YVGNLPGDIRE E+ED+FYKYG I I+LK+PPRPP Y FVEFE +RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-------------GVSRRS 107
AI+GRDGY+ DG RLRVELAHGGRG+SSSDR + G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
E+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTNYDDMK+AI+KLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 168 DSEFRNAFSRAYVRVREYD 186
D+EFRN ++R ++RV++Y+
Sbjct: 181 DTEFRNPWARGFIRVKKYE 199
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 159/199 (79%), Gaps = 13/199 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SR++YVGNLPGDIRE E+ED+FYKYG I I+LK+PPRPP Y FVEFE +RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-------------GVSRRS 107
AI+GRDGY+ DG RLRVELAHGGRG+SSSDR + G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
E+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTNYDDMK+AI+KLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 168 DSEFRNAFSRAYVRVREYD 186
D+EFRN ++R ++RV++Y+
Sbjct: 181 DTEFRNPWARGFIRVKKYE 199
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/190 (70%), Positives = 160/190 (84%), Gaps = 4/190 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLP DIRE E+EDLFYKYG I ++LKIPPRPP Y FVEFE ARDAED
Sbjct: 1 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG----VSRRSEYRVLVTGL 116
AIRGRDGY+FDG RLRVELAHGGRG SS+DR + G G G +SR SE+RV+V GL
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSNDRRGGYGGGGGSGGRFGISRHSEFRVIVRGL 120
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
PSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTN++DMK+AI+KLDD+EFRN ++
Sbjct: 121 PSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRNPWA 180
Query: 177 RAYVRVREYD 186
RAY+RV++++
Sbjct: 181 RAYIRVKQHE 190
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 170/228 (74%), Gaps = 6/228 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLP DIRE E+EDLFYKYG I ++LKIPPRPP Y FVEFE +RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS---DRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
AIRGRDGY+FDG RLRVELAHGGRG+SSS G GVSR SEYRV+V GLP
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRRGGHGSGGGGRFGVSRHSEYRVIVRGLP 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
SSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTN++DMK+AI+KLDD+EFRN ++R
Sbjct: 121 SSASWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAIRKLDDTEFRNPWAR 180
Query: 178 AYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQ 225
AY+RV+ YD + R+RS+S RS SRS S+
Sbjct: 181 AYIRVKRYDVSPRSRSRSHSPSRSRSLK---RNRSKSLERSVSRSASK 225
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/193 (68%), Positives = 154/193 (79%), Gaps = 8/193 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SR++YVGNLP DI+E EVEDLFYKYG I I+LKIPPRPP Y FVEFE +RDAED
Sbjct: 1 MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSD--------RHSSHSSGRGRGVSRRSEYRVL 112
AIRGRDGY+FDG RLRVELAHGGRG SSS G G+SR S+YRV+
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGGGGGRHGISRHSDYRVI 120
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
+ GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTNY+DMK+AI+KLDD+EFR
Sbjct: 121 IRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFR 180
Query: 173 NAFSRAYVRVREY 185
N ++R Y+RVREY
Sbjct: 181 NPWTRTYIRVREY 193
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 266 bits (679), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/182 (72%), Positives = 150/182 (82%), Gaps = 1/182 (0%)
Query: 4 RASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIR 63
R++ T+YVGNLPGDIRE E+EDLFYKYG I IDLK+PPRPPGY F+EF+ ARDAEDAIR
Sbjct: 3 RSNSTIYVGNLPGDIRESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIR 62
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSE-YRVLVTGLPSSASW 122
GRDGY FDGHRLRVE AHG S S R G+ RRS YRV+V GLP+SASW
Sbjct: 63 GRDGYKFDGHRLRVERAHGRASSVDVYYGSHSSGSRSSGLYRRSTGYRVIVHGLPTSASW 122
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
QDLKDHMRRAGDVCFSQV+R GSGT G+VDYT+Y+DMK+AI+KLDDSEFRN FSR+Y+RV
Sbjct: 123 QDLKDHMRRAGDVCFSQVYRKGSGTVGVVDYTSYEDMKYAIRKLDDSEFRNPFSRSYIRV 182
Query: 183 RE 184
RE
Sbjct: 183 RE 184
>gi|222618302|gb|EEE54434.1| hypothetical protein OsJ_01505 [Oryza sativa Japonica Group]
Length = 270
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/202 (70%), Positives = 156/202 (77%), Gaps = 24/202 (11%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYK FE+ RDA+D
Sbjct: 72 MSRRNSRTIYVGNLPGDIREREVEDLFYK----------------------FEDPRDADD 109
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S DR S+SSGR GVSRRSEYRV+VTGLPSS
Sbjct: 110 AICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSS 169
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYT Y+DMK+AI+KLDDSEFRNAFSRAY
Sbjct: 170 ASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSEFRNAFSRAY 229
Query: 180 VRVREYDHR-RDGSQSPSRGRS 200
+RVRE R R SPSRGRS
Sbjct: 230 IRVRESISRSRTPVSSPSRGRS 251
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 147/177 (83%), Gaps = 13/177 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLKIPPRPPGYAFVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV------------SRRSE 108
AI GRDGYDFDGH LRVELAHGGR RSS D S+S G SRRSE
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSE 119
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
YRV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMK+AIKK
Sbjct: 120 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKK 176
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/176 (74%), Positives = 146/176 (82%), Gaps = 13/176 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIREREVEDLF KYGP+ IDLKIPPRPPGYAFVEFE+ARDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV------------SRRSE 108
AI GRDGYDFDGH LRVELAHGGR RSS D S+S G SRRSE
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSE 119
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
YRV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMK+A++
Sbjct: 120 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAVR 175
>gi|357442431|ref|XP_003591493.1| Serine/arginine-rich splicing factor [Medicago truncatula]
gi|355480541|gb|AES61744.1| Serine/arginine-rich splicing factor [Medicago truncatula]
Length = 390
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/179 (72%), Positives = 143/179 (79%), Gaps = 2/179 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS SRT+YVGNLPGDIREREV+ LF KYG I IDLK+PPRPP YAFV F++A +A+D
Sbjct: 54 MSRHLSRTVYVGNLPGDIREREVKHLFMKYGHITRIDLKVPPRPPCYAFVVFKDALNADD 113
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRG-RGVSRRSEYRVLVTGLPS 118
AI DGYDFDG RLRVE AH G SSS DR+S HS+G+G RGVS SEYRVLV LPS
Sbjct: 114 AICECDGYDFDGCRLRVEAAHVGYCNSSSRDRYSIHSNGQGGRGVSSHSEYRVLVNRLPS 173
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
SAS QDLKDHMR+AG VCFSQV DG TTGIVDYTN DDMK+AIK LD SEF+NAFSR
Sbjct: 174 SASCQDLKDHMRKAGAVCFSQVVHDGRVTTGIVDYTNCDDMKYAIKNLDGSEFQNAFSR 232
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/169 (77%), Positives = 143/169 (84%), Gaps = 2/169 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR+SRT+YVGNLPGDIR REVED+FYK+GPI IDLKIPPRPPGYAFV+FE+ARDAED
Sbjct: 1 MSSRSSRTIYVGNLPGDIRLREVEDIFYKFGPIVDIDLKIPPRPPGYAFVQFEDARDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRG--RSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
AI RDGYDFDG RLRVELAHGGRG S S RG SRRS+YRVLVTGLP
Sbjct: 61 AIYYRDGYDFDGFRLRVELAHGGRGSSSSVDRYSSYSGGSSSRGASRRSDYRVLVTGLPP 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
SASWQDLKDHMR+AGDVCFSQVFR+ G TGIVDYTNYDDMK+A++KLD
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYALRKLD 169
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/163 (79%), Positives = 141/163 (86%), Gaps = 1/163 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSS 119
AI GRDGY+FDG+RLRVELAHGGRG+S S SS S R GVSRRS++RV+VTGLPSS
Sbjct: 61 AIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGLPSS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHA 162
ASWQDLKDHMRRAGDVCFS V+R+ T GIVDYTNYDDMK+A
Sbjct: 121 ASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYA 163
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 147/186 (79%), Gaps = 18/186 (9%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPG+AFVEFE+ RDAED
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED 126
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AIRGRDGY+FDG+RLRVELAHGGRG SSS ++S GR GVSR +EYRVLVTGLPSSA
Sbjct: 127 AIRGRDGYNFDGNRLRVELAHGGRGNSSS-FNNSGGGGRRGGVSRHTEYRVLVTGLPSSA 185
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKDHMR AGDV + T +V I+KLDDSEF+NAFS+AY+
Sbjct: 186 SWQDLKDHMRNAGDVVTLKC------TVRVV-----------IRKLDDSEFKNAFSKAYI 228
Query: 181 RVREYD 186
RV+EYD
Sbjct: 229 RVKEYD 234
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 140/179 (78%), Gaps = 13/179 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SR++YVGNLPGDIRE E+ED+FYKYG I I+LK+PPRPP Y FVEFE +RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-------------GVSRRS 107
AI+GRDGY+ DG RLRVELAHGGRG+SSSDR + G GVSR S
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
E+RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT G+VDYTNYDDMK+A++ L
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAVRNL 179
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 145/188 (77%), Gaps = 7/188 (3%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR SRT+YVGNLP DI+E E+EDLFYKYG I I+LKIPPRPP Y FVEFE RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR--RSEYRVLVTGLPS 118
AIR RDGY+FDG RLRVELAHGGRG SSSDR SS+ G G G +Y ++ L
Sbjct: 61 AIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGGQGFLLLDYVDMMNLLEX 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
+DHMR+AGDVCF++V RD GT GIVDYTNYDDMK+AI+KLDD+EFRN ++RA
Sbjct: 121 C-----FQDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARA 175
Query: 179 YVRVREYD 186
Y+RV++YD
Sbjct: 176 YIRVKKYD 183
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 115/146 (78%), Positives = 126/146 (86%), Gaps = 1/146 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GR GYDFDGHRLRVELAHGGRG S S S+GR RG ++R++YRV+VTGLPSSA
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGRGPSFDRSSSYSSAGR-RGAAKRTDYRVMVTGLPSSA 119
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSG 146
SWQDLKDHMRRAGDVCFS V+R+G G
Sbjct: 120 SWQDLKDHMRRAGDVCFSDVYREGGG 145
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/237 (55%), Positives = 157/237 (66%), Gaps = 19/237 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLP DIRE E+EDLFYKYG I ++LKIPPRPP Y FVEFE +RDAED
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSD---RHSSHSSGRGRGVSRRSEYRVLVTGLP 117
AIRGRDGY+FDG RLRVELAHGGRG+SSS G GVSR SEYR G
Sbjct: 61 AIRGRDGYNFDGCRLRVELAHGGRGQSSSSDRRGGHGSGGGGRFGVSRHSEYR----GAY 116
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHA---------IKKLDD 168
+ DHMR+AGDVCF++V RD GT G+VDYTN++DMK+A I+KLDD
Sbjct: 117 EIGRYCWNLDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAQLTCSSLSQIRKLDD 176
Query: 169 SEFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQ 225
+EFRN ++RAY+RV+ YD + R+RS+S RS SRS S+
Sbjct: 177 TEFRNPWARAYIRVKRYDVSPRSRSRSHSPSRSRSLK---RNRSKSLERSVSRSASK 230
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/138 (80%), Positives = 120/138 (86%), Gaps = 1/138 (0%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLKIPPRPPGYAFVEFE+ RDA+D
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI GR GYDFDGHRLRVELAHGGRG S S S+GR RG ++R++YRV+VTGLPSSA
Sbjct: 61 AIYGRHGYDFDGHRLRVELAHGGRGPSFDRSSSYSSAGR-RGAAKRTDYRVMVTGLPSSA 119
Query: 121 SWQDLKDHMRRAGDVCFS 138
SWQDLKDHMRRAGDVCFS
Sbjct: 120 SWQDLKDHMRRAGDVCFS 137
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/149 (77%), Positives = 125/149 (83%), Gaps = 3/149 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS R SRT+YVGNLPGDIREREVEDLFYKYG I IDLK+PPRPPGYAFVEFE+ RDAE+
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEE 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS---DRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
AI GRDGY+FDGHRLRVE AHGGRG +SS G RGVSR SEYRVLVTGLP
Sbjct: 61 AIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGARRGVSRHSEYRVLVTGLP 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSG 146
SSASWQDLKDHMR+AGDVCFS+V+R+G G
Sbjct: 121 SSASWQDLKDHMRKAGDVCFSEVYREGGG 149
>gi|115436242|ref|NP_001042879.1| Os01g0316600 [Oryza sativa Japonica Group]
gi|113532410|dbj|BAF04793.1| Os01g0316600, partial [Oryza sativa Japonica Group]
Length = 178
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/136 (80%), Positives = 122/136 (89%), Gaps = 1/136 (0%)
Query: 52 FEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSS-DRHSSHSSGRGRGVSRRSEYR 110
FE+ RDA+DAI GRDGY+FDG+RLRVELAHGGRG+S S DR S+SSGR GVSRRSEYR
Sbjct: 1 FEDPRDADDAICGRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYR 60
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
V+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ T GIVDYT Y+DMK+AI+KLDDSE
Sbjct: 61 VMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSE 120
Query: 171 FRNAFSRAYVRVREYD 186
FRNAFSRAY+RVREYD
Sbjct: 121 FRNAFSRAYIRVREYD 136
>gi|227206256|dbj|BAH57183.1| AT4G02430 [Arabidopsis thaliana]
Length = 176
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 129/172 (75%), Gaps = 14/172 (8%)
Query: 7 RTLYVGNLPGDIREREVEDLFY-KYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
R ++ L G + LF+ KYGP+ IDLKIPPRPPGYAFVEFE+ARDA+DAI GR
Sbjct: 4 RNCWILILFGRSFLKNCSSLFFLKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGR 63
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV------------SRRSEYRVLV 113
DGYDFDGH LRVELAHGGR RSS D S+S G SRRSEYRV+V
Sbjct: 64 DGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEYRVVV 122
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMK+AIKK
Sbjct: 123 SGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAIKK 174
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 155/233 (66%), Gaps = 29/233 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEF++ RDAEDA+ RDGY
Sbjct: 11 IYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 69
Query: 69 DFDGHRLRVELAHGG---------RGRSSSDR--HSSHSSGRGRGV-SRRSEYRVLVTGL 116
D+DG+RLRVE GG RG S R S+ RGRG +RRS+YRVLVTGL
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGL 129
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
P S SWQDLKDHMR AGDVCF+ VF+DG TG+V++ Y+DMK+A+KKLDDS FR+
Sbjct: 130 PPSGSWQDLKDHMREAGDVCFADVFKDG---TGVVEFLRYEDMKYAVKKLDDSRFRSHEG 186
Query: 177 R-AYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKS 228
AY+RV+E DH S RGRSE R R RS RSYS R S +
Sbjct: 187 EVAYIRVKE-DH-----------NSGDRGRSEDRERGRSHSRSYSPRRRGSPT 227
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 155/233 (66%), Gaps = 29/233 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEF++ RDAEDA+ RDGY
Sbjct: 11 IYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 69
Query: 69 DFDGHRLRVELAHGG---------RGRSSSDR--HSSHSSGRGRGV-SRRSEYRVLVTGL 116
D+DG+RLRVE GG RG S R S+ RGRG +RRS+YRVLVTGL
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGL 129
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
P S SWQDLKDHMR AGDVCF+ V++DG TG+V++ Y+DMK+A+KKLDDS FR+
Sbjct: 130 PPSGSWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRYEDMKYAVKKLDDSRFRSHEG 186
Query: 177 R-AYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKS 228
AY+RV+E DH S RGRSE R R RS RSYS R S +
Sbjct: 187 EVAYIRVKE-DH-----------NSGDRGRSEDRERGRSHSRSYSPRRRGSPT 227
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 155/233 (66%), Gaps = 29/233 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEF++ RDAEDA+ RDGY
Sbjct: 11 IYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 69
Query: 69 DFDGHRLRVELAHGG---------RGRSSSDR--HSSHSSGRGRGV-SRRSEYRVLVTGL 116
D+DG+RLRVE GG RG S R S+ RGRG +RRS+YRVLVTGL
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGL 129
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
P S SWQDLKDHMR AGDVCF+ V++DG TG+V++ Y+DMK+A+KKLDDS FR+
Sbjct: 130 PPSGSWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRYEDMKYAVKKLDDSRFRSHEG 186
Query: 177 R-AYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKS 228
AY+RV+E DH S RGRSE R R RS RSYS R S +
Sbjct: 187 EVAYIRVKE-DH-----------SSGDRGRSEDRERGRSHSRSYSPRRRGSPT 227
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 154/233 (66%), Gaps = 29/233 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEF++ RDAEDA+ RDGY
Sbjct: 11 IYVGNLPPDIRTKDIQDLFYKFGKVIFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 69
Query: 69 DFDGHRLRVELAHGG---------RGRSSSDR--HSSHSSGRGRGV-SRRSEYRVLVTGL 116
D+DG+RLRVE GG RG S R S+ RGRG +RRS+YRVLVTGL
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGL 129
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
P S SWQDLKDHMR AGDVCF+ VF+DG TG+V++ Y+DMK+A+KK DDS FR+
Sbjct: 130 PPSGSWQDLKDHMREAGDVCFADVFKDG---TGVVEFLRYEDMKYAVKKXDDSRFRSHEG 186
Query: 177 R-AYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKS 228
AY+RV+E DH S RGRSE R R RS RSYS R S +
Sbjct: 187 EVAYIRVKE-DH-----------NSGDRGRSEDRERGRSHSRSYSPRRRGSPT 227
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 125/176 (71%), Gaps = 4/176 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIREREVEDLF KYG + ID+K P RPP +AFVEF + RDAEDA+RGRDGY
Sbjct: 12 VYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGY 71
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
DF G+RLRVELA G GR R R++ +RVLV GLP SASWQDLKDH
Sbjct: 72 DFYGNRLRVELAKGAGGRGRGFGGGPPPGFR----PRQTGFRVLVKGLPMSASWQDLKDH 127
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
+R+ ++ VFRD G TG+V++ DDM+ I+KLDD+EFRN F RAYVRV E
Sbjct: 128 VRQVCKPAYTNVFRDRDGVTGVVEFETADDMERTIRKLDDTEFRNPFDRAYVRVVE 183
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 131/181 (72%), Gaps = 14/181 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR REVED+FYKYG I ID+K P RPP +AFV+FE+ARDAEDAIRGRDGY
Sbjct: 6 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRDGY 65
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRG-----RGVSRRSEYRVLVTGLPSSASWQ 123
D+DG RLRVE A+GGR R S+ S RG R + E+ V V+ LP SWQ
Sbjct: 66 DYDGARLRVEAANGGR------RESARDSARGSARYPRNIRGNGEFTVEVSNLPPRVSWQ 119
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
DLKD MR+AGDV F++V DG G G+V+Y+N DMK+A++KLDD+EFR +YVRVR
Sbjct: 120 DLKDFMRKAGDVTFTEV--DGRG-GGVVEYSNKRDMKYAVEKLDDTEFRGRSENSYVRVR 176
Query: 184 E 184
+
Sbjct: 177 Q 177
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 134/186 (72%), Gaps = 12/186 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +A +YVGNLP DIR +++EDLF+KYG I IDLK PP +AFVEFE+ RDAED
Sbjct: 1 MSYKAESRVYVGNLPPDIRTKDIEDLFHKYGKITFIDLKNRRGPP-FAFVEFEDPRDAED 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-SRRSEYRVLVTGLPSS 119
A+ RDGYD+DG++LRVE G R RGRG +RRS+YRV+VTGLP +
Sbjct: 60 AVSARDGYDYDGYKLRVEFPRGNSARPRG------GPSRGRGPPARRSQYRVIVTGLPPT 113
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA- 178
SWQDLKDHMR AGDVC++ V++DG TG+V++ Y+DMK+A+KKLDDS FR+ S
Sbjct: 114 GSWQDLKDHMREAGDVCYADVYKDG---TGVVEFLRYEDMKYAVKKLDDSRFRSHESEVS 170
Query: 179 YVRVRE 184
YVRV+E
Sbjct: 171 YVRVKE 176
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 128/181 (70%), Gaps = 14/181 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGNLP D+REREVEDLF+KYG I +DLKI PRPP +AFVEFE+ RDA DA+RGRDG
Sbjct: 1 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR--------------GVSRRSEYRVLVT 114
+F G RLRVE++HG RG G G G SRR++YRV+VT
Sbjct: 61 EFQGQRLRVEISHGRRGGFGGGGGGGGGGGYGGGGGGGYGGGGPNPYGPSRRTDYRVIVT 120
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
GLP S+SWQDLKDHMRRAG+V FSQV RDG G G++DY +DM+ A++KLD SEFRN
Sbjct: 121 GLPISSSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATREDMETALRKLDGSEFRNP 180
Query: 175 F 175
+
Sbjct: 181 Y 181
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 145/217 (66%), Gaps = 29/217 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEF++ RDAEDA+ RDGY
Sbjct: 11 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 69
Query: 69 DFDGHRLRVELAHGG---------RGRSSSDR--HSSHSSGRGRGV-SRRSEYRVLVTGL 116
D+DG+RLRVE GG RG S R S+ RGRG +RRS+YRVLV+GL
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVSGL 129
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
P S SWQDLKDHMR AGDVCF+ V++DG TG+V++ +DDMK+A+KKLDDS FR+
Sbjct: 130 PPSGSWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRHDDMKYAVKKLDDSRFRSHEG 186
Query: 177 R-AYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRS 212
AY+RV+E DH RGRSE R R
Sbjct: 187 EVAYIRVKE-DH-----------SGGDRGRSEDRERG 211
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/197 (55%), Positives = 140/197 (71%), Gaps = 17/197 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEF++ RDAEDA+ RDGY
Sbjct: 22 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 80
Query: 69 DFDGHRLRVELAHGGRGRSSS---------DRHSSHSSGRGRGV-SRRSEYRVLVTGLPS 118
D+DG+RLRVE GG G SSS + RGRG +RRS+YRVLVTGLP
Sbjct: 81 DYDGYRLRVEFPRGG-GPSSSFRGRGGGDSRGRGDMGNSRGRGPPARRSQYRVLVTGLPP 139
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSR 177
S SWQDLKDHMR AGDVCF+ V++DG TG+V++ Y+DMK+A+KKLDDS FR +
Sbjct: 140 SGSWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRYEDMKYAVKKLDDSRFRSHEGEV 196
Query: 178 AYVRVREYDHRRDGSQS 194
AY+RV+E DH G +S
Sbjct: 197 AYIRVKE-DHGGSGDRS 212
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 23/209 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+DA++ RDGY
Sbjct: 10 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGY 68
Query: 69 DFDGHRLRVELAHGG-RGRSSSDRHSSHSSGRGRGV---------SRRSEYRVLVTGLPS 118
D+DG+RLRVE GG GR SS +S RG G +RRS++RV+VTGLP+
Sbjct: 69 DYDGYRLRVEFPRGGGPGRYSSSSRGGNSD-RGGGARDRGNRGPPARRSQFRVMVTGLPA 127
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR- 177
S SWQDLKDHMR AGDVCF+ V++DG TG+V++ ++DMK+AIKKLDDS FR+
Sbjct: 128 SGSWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRHEDMKYAIKKLDDSRFRSHEGEV 184
Query: 178 AYVRVRE----YDHRRDGSQSPSRGRSYS 202
AY+RVRE D RR G R RSYS
Sbjct: 185 AYIRVREDSTNNDDRRGGEY---RDRSYS 210
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 127/179 (70%), Gaps = 12/179 (6%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S+ +YVGNLP IR REVEDLFYK+G I IDLK+P RPP YAF++FE+ARDAEDAI R
Sbjct: 2 SKRIYVGNLPMSIRTREVEDLFYKHGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEAR 61
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
DGY ++G RLRVE A+ ++H S +G V VT LPS SWQDL
Sbjct: 62 DGYKYEGQRLRVERANPKN--IEKEKHVRGSRSKGSNT-------VKVTNLPSRVSWQDL 112
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
KD MR+AG+V F+++ + G G IVD+ ++DDMK+AIK+LDD++FRN F RAYVRV++
Sbjct: 113 KDFMRKAGEVTFAKIDKHGDG---IVDFKHHDDMKYAIKRLDDTKFRNRFDRAYVRVKQ 168
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 140/197 (71%), Gaps = 11/197 (5%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPR-PPGYAFVEFEEARDAEDA 61
SR + +YVGNLP D + R++E+LF KYGPIA IDLK R P +AFVEFE+ DA DA
Sbjct: 6 SRTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDA 65
Query: 62 IRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSAS 121
+RGRDGY+FDG+ LRVEL G +R + G G SRRS++RV+VTGLP + S
Sbjct: 66 VRGRDGYNFDGYALRVELPRTG----VPERRFNRGGGGASGPSRRSDFRVIVTGLPPTGS 121
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYV 180
WQDLKDHMR AGDV ++ VFRDG TG+V++ Y+DMK+AI++LDDS+FR + +Y+
Sbjct: 122 WQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYI 178
Query: 181 RVREYDHRRDGSQSPSR 197
RVRE R GS+S SR
Sbjct: 179 RVRE--ERAGGSRSRSR 193
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 134/188 (71%), Gaps = 11/188 (5%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR +YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEFE+ RDA+DA+
Sbjct: 8 SRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPP-FAFVEFEDPRDADDAV 66
Query: 63 RGRDGYDFDGHRLRVELAHGGRGR-----SSSDRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
R RDGYD+DG+RLRVE GG G S DR + RG +RRSEYRVLVTGLP
Sbjct: 67 RARDGYDYDGYRLRVEFPRGGGGGARGGRSQPDRFGPRPAARG-PPARRSEYRVLVTGLP 125
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
S SWQDLKDHMR AGDVCF+ F+DG TG+V++ ++DMK+A+KKLDDS FR+
Sbjct: 126 PSGSWQDLKDHMREAGDVCFADTFKDG---TGVVEFLRHEDMKYAVKKLDDSRFRSHEGE 182
Query: 178 A-YVRVRE 184
Y+RV+E
Sbjct: 183 VSYIRVKE 190
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 130/176 (73%), Gaps = 9/176 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR REVED+FYKYG I ID+K P RPP +AFV+FE+ RDAEDAIRGRDGY
Sbjct: 533 VYVGNLPMDIRTREVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGRDGY 592
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR-GRGVSRRSEYRVLVTGLPSSASWQDLKD 127
D+DG RLRVE A+GGR R S+ R SGR R + +Y V ++ LP SWQDLKD
Sbjct: 593 DYDGARLRVEPANGGR-RESAPR----GSGRYPRNIRGTGDYTVEISNLPPRVSWQDLKD 647
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
MR+AGDV F++V DG G GIV+Y+N DMK+A++KLDDSEFR +YVRVR
Sbjct: 648 FMRKAGDVVFTEV--DGRG-GGIVEYSNKRDMKYAVEKLDDSEFRGRSENSYVRVR 700
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 132/172 (76%), Gaps = 12/172 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+DA++ RDGY
Sbjct: 10 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGY 68
Query: 69 DFDGHRLRVELAHGG-----RG--RSSSDRHSSHSSGRGRGV-SRRSEYRVLVTGLPSSA 120
D+DG+RLRVE GG RG + +SDR+S RG +RRS++RV+VTGLPSS
Sbjct: 69 DYDGYRLRVEFPRGGGPGSYRGSRQGNSDRNSRGGDRNNRGPPARRSQFRVMVTGLPSSG 128
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKDHMR AGDVCF+ V++DG TG+V++ ++DMK+AIKKLDDS FR
Sbjct: 129 SWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRHEDMKYAIKKLDDSRFR 177
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 153/254 (60%), Gaps = 35/254 (13%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
MS R + +YVGNLP DIR +++EDLFYK+G I IDLK PP +AFVEF++ RDAE
Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAE 59
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-SRRSEYRVLVTGLPS 118
DA++ RDGYD+DG+RLRVE G S+ S GRGRG +RRS+YRVLV+GLP
Sbjct: 60 DAVQARDGYDYDGYRLRVEFPRG-----SAPGRGSMGPGRGRGPPARRSQYRVLVSGLPP 114
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
S SWQDLKDHMR AGDVC++ VF+DG TG+V++ Y+DMK+A+KKLDDS FR+
Sbjct: 115 SGSWQDLKDHMREAGDVCYADVFKDG---TGVVEFLRYEDMKYAVKKLDDSRFRSHEGEV 171
Query: 179 -YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRS 237
Y+RVRE S R SP +RRS
Sbjct: 172 SYIRVRE-----------------------DYSSRSRSRSRSYSPRRSRGSPTYSPARRS 208
Query: 238 PDRSRSRSASRSRS 251
R+ SRS S S S
Sbjct: 209 GSRTPSRSRSCSHS 222
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 134/190 (70%), Gaps = 10/190 (5%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGG-----RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTG 115
A++ RDGYD+DG+RLRVE GG RG + G ++RS+YRV+VTG
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNRNDRSRDGGRMGGRGPPAKRSQYRVMVTG 119
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAF 175
LP S SWQDLKDHMR AGDVCF+ ++DGS G+V++ ++DMK+AIKKLDDS FR+
Sbjct: 120 LPGSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIKKLDDSRFRSHE 176
Query: 176 SR-AYVRVRE 184
AY+RVRE
Sbjct: 177 GEVAYIRVRE 186
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 122/164 (74%), Gaps = 10/164 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I HIDLK PP +AFVEF++ RDAEDA+RGRDGY
Sbjct: 10 IYVGNLPPDIRVKDIEDIFYKYGNIRHIDLKNKRGPP-FAFVEFDDKRDAEDAVRGRDGY 68
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
++DG+RLRVE G SRRSEYRVLV+GLP + SWQDLKDH
Sbjct: 69 NYDGYRLRVEFPRGTSRGGYRGGRRVGQP------SRRSEYRVLVSGLPPTGSWQDLKDH 122
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
MR AGDVC++ VFRDG TG+V++ NY+DMK+A+K+LDDS+FR
Sbjct: 123 MREAGDVCYADVFRDG---TGVVEFLNYEDMKYAVKQLDDSKFR 163
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 152/254 (59%), Gaps = 35/254 (13%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
MS R + +YVGNLP DIR +++EDLFYK+G I IDLK PP +AFVEF++ RDAE
Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAE 59
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-SRRSEYRVLVTGLPS 118
DA+ RDGYD+DG+RLRVE G S+ S GRGRG +RRS+YRVLV+GLP
Sbjct: 60 DAVHARDGYDYDGYRLRVEFPRG-----SAPGRGSMGPGRGRGPPARRSQYRVLVSGLPP 114
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
S SWQDLKDHMR AGDVC++ VF+DG TG+V++ Y+DMK+A+KKLDDS FR+
Sbjct: 115 SGSWQDLKDHMREAGDVCYADVFKDG---TGVVEFLRYEDMKYAVKKLDDSRFRSHEGEV 171
Query: 179 -YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRS 237
Y+RVRE S R SP +RRS
Sbjct: 172 SYIRVRE-----------------------DYSSRSRSRSRSYSPRRSRGSPTYSPARRS 208
Query: 238 PDRSRSRSASRSRS 251
R+ SRS S S S
Sbjct: 209 GSRTPSRSRSCSHS 222
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 137/192 (71%), Gaps = 12/192 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGG-----RGRSSSDRHSSHSSGRGRGV--SRRSEYRVLV 113
A++ RDGYD+DG+RLRVE GG RG + +DR G ++RS+YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
TGLP S SWQDLKDHMR AGDVCF+ ++DGS G+V++ ++DMK+AIKKLDDS FR+
Sbjct: 120 TGLPGSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 174 AFSR-AYVRVRE 184
AY+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 137/201 (68%), Gaps = 28/201 (13%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+D
Sbjct: 1 MGSRNESRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV----------------S 104
A++ RDGYD+DG+RLRVE GG GR+ H + RG +
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGG-GRNE------HRNNRGNERGNQREGGRGGGGRGPPT 112
Query: 105 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
+RS+YRVLVTGLPSS SWQDLKDHMR AGDVCF+ ++DG TG+V++ ++DMK+AIK
Sbjct: 113 KRSQYRVLVTGLPSSGSWQDLKDHMREAGDVCFADTYKDG---TGVVEFLRHEDMKYAIK 169
Query: 165 KLDDSEFRNAFSRA-YVRVRE 184
KLDDS FR+ Y+RVRE
Sbjct: 170 KLDDSRFRSHEGEVGYIRVRE 190
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 137/192 (71%), Gaps = 12/192 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGG-----RGRSSSDRHSSHSSGRGRGV--SRRSEYRVLV 113
A++ RDGYD+DG+RLRVE GG RG + +DR G ++RS+YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR- 172
TGLP S SWQDLKDHMR AGDVCF+ ++DGS G+V++ ++DMK+AIKKLDDS FR
Sbjct: 120 TGLPGSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 173 NAFSRAYVRVRE 184
+ AY+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 152/254 (59%), Gaps = 35/254 (13%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
MS R + +YVGNLP DIR +++EDLFYK+G I IDLK PP +AFVEF++ RDAE
Sbjct: 1 MSFRGNECRIYVGNLPPDIRSKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFDDPRDAE 59
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-SRRSEYRVLVTGLPS 118
DA+ RDGYD+DG+RLRVE G S+ S GRGRG +RRS+YRVLV+GLP
Sbjct: 60 DAVHARDGYDYDGYRLRVEFPRG-----SAPGRGSMGPGRGRGPPARRSQYRVLVSGLPP 114
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
S SWQDLKDHMR AGDVC++ VF+DG TG+V++ Y+DMK+A+KKLDDS FR+
Sbjct: 115 SGSWQDLKDHMREAGDVCYADVFKDG---TGVVEFLRYEDMKYAVKKLDDSRFRSHEGEV 171
Query: 179 -YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRS 237
Y+RVRE S R SP +RRS
Sbjct: 172 SYIRVRE-----------------------DYSSRSRSRSRSYSPRRSRGSPTYSPARRS 208
Query: 238 PDRSRSRSASRSRS 251
R+ SRS S S S
Sbjct: 209 GSRTPSRSRSCSHS 222
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 137/192 (71%), Gaps = 12/192 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGG-----RGRSSSDRHSSHSSGRGRGV--SRRSEYRVLV 113
A++ RDGYD+DG+RLRVE GG RG + +DR G ++RS+YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGNNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR- 172
TGLP S SWQDLKDHMR AGDVCF+ ++DGS G+V++ ++DMK+AIKKLDDS FR
Sbjct: 120 TGLPGSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 173 NAFSRAYVRVRE 184
+ AY+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 128/176 (72%), Gaps = 16/176 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEF++ RDAEDA+ RDGY
Sbjct: 11 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 69
Query: 69 DFDGHRLRVELAHGG---------RGRSSSDR--HSSHSSGRGRGV-SRRSEYRVLVTGL 116
D+DG+RLRVE GG RG S R S+ RGRG +RRS+YRVLVTGL
Sbjct: 70 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVTGL 129
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
P S SWQDLKDHMR AGDVCF+ V++DG TG+V++ +DDMK+A+KKLDDS FR
Sbjct: 130 PPSGSWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRHDDMKYAVKKLDDSRFR 182
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 141/193 (73%), Gaps = 14/193 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGG-----RGRSSSDRHSSHSSGRGRGV---SRRSEYRVL 112
A++ RDGYD+DG+RLRVE GG RG + +DR++ GR G ++RS+YRV+
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRG-NRNDRNNGRDGGRMGGRGPPAKRSQYRVM 118
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
VTGLP S SWQDLKDHMR AGDVCF+ ++DGS G+V++ ++DMK+AIKKLDDS FR
Sbjct: 119 VTGLPPSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIKKLDDSRFR 175
Query: 173 NAFSR-AYVRVRE 184
+ AY+RVRE
Sbjct: 176 SHEGEVAYIRVRE 188
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 165/274 (60%), Gaps = 29/274 (10%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R ++VGNLP D+++R++ED+FYKYG I ID+K P +AFVEF++ RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFVEFDDPRDARD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRH---SSHSSGRGRGVSRRSEYRVLVTGLP 117
A+ GRDGYDFDG R+RVEL G R R S R RRS YRV+++GLP
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDPRSPRHGPPPRRSGYRVVISGLP 119
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
+ SWQDLKDHMR AG++C++ VFRDG TG+V+YTNY+DMK+A++KLDD++F++
Sbjct: 120 DTGSWQDLKDHMRDAGEICYADVFRDG---TGVVEYTNYEDMKYALRKLDDTKFKSHEGE 176
Query: 178 A-YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRS------------ 224
Y+RVRE + SP+R RS S ++RS +
Sbjct: 177 VTYIRVREAN-----INSPNRSRSRSYTPRKTRSSPKYSPIRSVSRSRSRSSRSRSHSHA 231
Query: 225 ----QSKSPKAKSSRRSPDRSRSRSASRSRSGSK 254
+S SP S RSP R+RS++ RSRS S+
Sbjct: 232 SFVRRSVSPVNSSHSRSPSRTRSKTCPRSRSESR 265
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 156/243 (64%), Gaps = 32/243 (13%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR SR +YVGNLP +R ++VED+F KYG + ++DLK R P +AFVEFE+ARDAEDA+
Sbjct: 2 SRESR-IYVGNLPTTVRAKDVEDIFSKYGKVLYVDLK-DRRQPYFAFVEFEDARDAEDAV 59
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR------------RSEYR 110
RGRDGYD++G+RLRVE + +GR +SR R+ YR
Sbjct: 60 RGRDGYDYEGYRLRVEFPR--GLGPRGPGGRPYDTGRNLSLSRNASGGGSSSGGRRANYR 117
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
V+V+GLP+S SWQDLKDHMR AGDVC++ V RDG TGIV+Y Y+DMK+A++KLDD++
Sbjct: 118 VIVSGLPASGSWQDLKDHMREAGDVCYTDVLRDG---TGIVEYGRYEDMKYALRKLDDTK 174
Query: 171 FR-NAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGR---SYSRSRSQS 226
F+ + +Y+RVRE D +S R++SR RS SR + SYS S S S
Sbjct: 175 FKSHEGETSYIRVRE-----DNGES----RAHSRSRSPVGRASRGSPQYSPSYSNSGSHS 225
Query: 227 KSP 229
SP
Sbjct: 226 HSP 228
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 128/176 (72%), Gaps = 16/176 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEF++ RDAEDA+ RDGY
Sbjct: 12 IYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFDDPRDAEDAVHARDGY 70
Query: 69 DFDGHRLRVELAHGG---------RGRSSSDR--HSSHSSGRGRGV-SRRSEYRVLVTGL 116
D+DG+RLRVE GG RG S R S+ RGRG +RRS+YRVLV+GL
Sbjct: 71 DYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVSGL 130
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
P S SWQDLKDHMR AGDVCF+ V++DG TG+V++ +DDMK+A+KKLDDS FR
Sbjct: 131 PPSGSWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRHDDMKYAVKKLDDSRFR 183
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 145/218 (66%), Gaps = 23/218 (10%)
Query: 2 SSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDA 61
S R +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ RDA+DA
Sbjct: 3 SGRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDNRDADDA 61
Query: 62 IRGRDGYDFDGHRLRVELAHGG-----RG-------RSSSDRHSSHSSGRGRGV-SRRSE 108
++ RDGYD+DG+RLRVE GG RG G RG +RRS+
Sbjct: 62 VKARDGYDYDGYRLRVEFPRGGGPGSYRGSRGSTSGDRGGGSSGRDRGGNNRGPPARRSQ 121
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDD 168
+RV+VTGLP+S SWQDLKDHMR AGDVCF+ V++DG TG+V+Y ++DMK+AIKKLDD
Sbjct: 122 FRVVVTGLPASGSWQDLKDHMREAGDVCFADVYKDG---TGVVEYLRHEDMKYAIKKLDD 178
Query: 169 SEFRNAFSR-AYVRVRE---YDHRRDGSQSPSRGRSYS 202
S FR+ AY+RVRE D RR G + R RSYS
Sbjct: 179 SRFRSHEGEVAYIRVREDSGNDDRRGGGE--HRDRSYS 214
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 136/199 (68%), Gaps = 12/199 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSEYRV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVRE 184
KDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++FR + AY+RV
Sbjct: 138 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV-- 192
Query: 185 YDHRRDGSQSPSRGRSYSR 203
+ DG +SPS GRS SR
Sbjct: 193 ---KVDGPRSPSYGRSRSR 208
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 139/189 (73%), Gaps = 13/189 (6%)
Query: 1 MSSR--ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDA 58
MSSR +YVGNLP D+RE++VEDLFYKYG I H++LK PP +AFVEFE+ RDA
Sbjct: 1 MSSRDDVDCRVYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPP-FAFVEFEDRRDA 59
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHS-SHSSGRGRG--VSRRSEYRVLVTG 115
ED++ GR+GY+FDG++LRVE RG S R + SS R RG SRR+++RV+V+G
Sbjct: 60 EDSVHGRNGYNFDGYKLRVEHP---RGNGPSQRPAYGMSSFRARGGPPSRRTDFRVMVSG 116
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NA 174
LP + SWQDLKDHMR AGDVC++ V+RDG TG+V++ N DDM+ A+K LDD++FR +
Sbjct: 117 LPPTGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVNRDDMQFAVKHLDDTKFRSHE 173
Query: 175 FSRAYVRVR 183
AY+RV+
Sbjct: 174 GETAYIRVK 182
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 243
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 135/190 (71%), Gaps = 11/190 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDVEDVFYKYGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR--GVSRRSEYRVLVTGLPSSASWQDLK 126
D+DG+RLRVE GRG + + RGR SRRSEYRV+V+GLP S SWQDLK
Sbjct: 78 DYDGYRLRVEFPRSGRGGGRGGGGGALGTPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLK 137
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVREY 185
DHMR AGDVC++ V+RDG TG+V++ +DM +AI+KLD+++FR + AY+RV
Sbjct: 138 DHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAIRKLDNTKFRSHEGETAYIRV--- 191
Query: 186 DHRRDGSQSP 195
+ DG +SP
Sbjct: 192 --KMDGPRSP 199
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 139/194 (71%), Gaps = 14/194 (7%)
Query: 1 MSSRASRT--LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDA 58
MSSR +YVGNLP DIR ++VEDLF+++G ++ +DLK PP + FVEFE+ RDA
Sbjct: 1 MSSRGGNENRIYVGNLPPDIRTKDVEDLFFRFGKVSFVDLKNRRGPP-FVFVEFEDHRDA 59
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGG------RGRSSSDRHSSHSSGRGRG-VSRRSEYRV 111
DA++ R YD+DG++LRVE GG RGRS++DR S G +RRS+YRV
Sbjct: 60 SDAVKARSNYDYDGYKLRVEFPRGGGPGSSYRGRSNNDRGGSGRGGGNNRPAARRSQYRV 119
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
LV+GLPSS SWQDLKDHMR AGDVCF+ V++DG TG+V++ Y+DMK+AIKKLDDS F
Sbjct: 120 LVSGLPSSGSWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRYEDMKYAIKKLDDSRF 176
Query: 172 RNAFSR-AYVRVRE 184
R+ AY+R++E
Sbjct: 177 RSHEGEVAYIRIKE 190
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 130/184 (70%), Gaps = 13/184 (7%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPR-PPGYAFVEFEEARDAEDA 61
SR + +YVGNLP D + R++E+LF KYGPIA IDLK R P +AFVEFE+ DA DA
Sbjct: 2 SRTTHKIYVGNLPPDTKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDA 61
Query: 62 IRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSAS 121
+RGRDGY+FDG+ LRVEL G S G SRRS++RV+VTGLP + S
Sbjct: 62 VRGRDGYNFDGYALRVELPRTGGFNRGGGGAS--------GPSRRSDFRVIVTGLPPTGS 113
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYV 180
WQDLKDHMR AGDV ++ VFRDG TG+V++ Y+DMK+AI++LDDS+FR + +Y+
Sbjct: 114 WQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYI 170
Query: 181 RVRE 184
RVRE
Sbjct: 171 RVRE 174
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 135/192 (70%), Gaps = 12/192 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELA-------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLV 113
A++ RDGYD+DG+RLRVE + G R+ R G ++RS+YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR- 172
TGLP+S SWQDLKDHMR AGDVCF+ ++DGS G+V++ ++DMK+AIKKLDDS FR
Sbjct: 120 TGLPASGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 173 NAFSRAYVRVRE 184
+ AY+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 135/192 (70%), Gaps = 12/192 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELA-------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLV 113
A++ RDGYD+DG+RLRVE + G R+ R G ++RS+YRV+V
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMV 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR- 172
TGLP+S SWQDLKDHMR AGDVCF+ ++DGS G+V++ ++DMK+AIKKLDDS FR
Sbjct: 120 TGLPASGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIKKLDDSRFRS 176
Query: 173 NAFSRAYVRVRE 184
+ AY+RVRE
Sbjct: 177 HEGEVAYIRVRE 188
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 120/168 (71%), Gaps = 8/168 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP ++R+ +++D+FYKYG I H+DLKI PP +AFVEFE+ RDA+DA+ GRDGY
Sbjct: 8 IYVGNLPPEVRQEDIKDVFYKYGKIIHVDLKIGRGPP-FAFVEFEDKRDADDAVYGRDGY 66
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV----SRRSEYRVLVTGLPSSASWQD 124
DG+RLRVE G G G SRRSEYRVLV+GLP + SWQD
Sbjct: 67 TLDGYRLRVEFPRGSARGGYGRSGGGGGGGGGARRGGAPSRRSEYRVLVSGLPPTGSWQD 126
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
LKDHMR AGDVCF+ VFRDG TG+V++ YDDMK+A+K LDDS+FR
Sbjct: 127 LKDHMREAGDVCFADVFRDG---TGVVEFLRYDDMKYAVKHLDDSKFR 171
>gi|384252888|gb|EIE26363.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 124/198 (62%), Gaps = 23/198 (11%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
++VGNLPGD+RERE+EDLFYKYG I +IDLK+PPRPP +AFVEFE+ AEDA++GRDG
Sbjct: 7 VIFVGNLPGDVREREIEDLFYKYGRIRNIDLKLPPRPPAFAFVEFEKPSHAEDAVKGRDG 66
Query: 68 YDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR--------------------- 106
Y FD + +RVEL+ GG G S +S + R R R
Sbjct: 67 YVFDNNPIRVELSRGGMGGRSGGDKTSGAPPRDRDEPRGGGGGATFGRAAPPPVPSNFRQ 126
Query: 107 --SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
S YR V LP SASWQDLKDH R+ + VFRD G G+V++ +D+ AI+
Sbjct: 127 KGSAYRATVKNLPMSASWQDLKDHFRKVCTPNYVNVFRDRGGVLGVVEFDTPEDLARAIR 186
Query: 165 KLDDSEFRNAFSRAYVRV 182
KLDD+EFRN F RAY+RV
Sbjct: 187 KLDDTEFRNPFERAYIRV 204
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 155/243 (63%), Gaps = 32/243 (13%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR SR +YVGNLP +R ++VED+F KYG + ++DLK R P +AFVEFE+ARDAEDA+
Sbjct: 2 SRESR-IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAV 59
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRS------------EYR 110
RGRDGYD++G+RLRVE + SGR VSR + YR
Sbjct: 60 RGRDGYDYEGYRLRVEFPR--GLGPRGPGGRPYDSGRNLSVSRSAGGGGSSSGSRRANYR 117
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
V+V+GLP+S SWQDLKDHMR AGDVC++ V RDG TGIV+Y Y+DMK+A++KLDD++
Sbjct: 118 VIVSGLPASGSWQDLKDHMREAGDVCYTDVLRDG---TGIVEYGRYEDMKYALRKLDDTK 174
Query: 171 FR-NAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGR---SYSRSRSQS 226
F+ + +Y+RV+E D +S R++SR RS SR + SYS S S S
Sbjct: 175 FKSHEGETSYIRVKE-----DNGES----RAHSRSRSPVGRASRGSPQYSPSYSNSGSHS 225
Query: 227 KSP 229
SP
Sbjct: 226 HSP 228
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 130/186 (69%), Gaps = 7/186 (3%)
Query: 2 SSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDA 61
+SR +YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEFE+ RDA+DA
Sbjct: 3 NSRNDCRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRRGPP-FAFVEFEDPRDADDA 61
Query: 62 IRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV--SRRSEYRVLVTGLPSS 119
+ RDGYD+DG+RLRVE GG S GR +RRS++RVLVTGLP S
Sbjct: 62 VHARDGYDYDGYRLRVEFPRGGGHGSFRGGRGGGDRGRSSRGPPARRSQFRVLVTGLPPS 121
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA- 178
SWQDLKDHMR AGDVCF+ F+DGS G+V++ Y+DMK+AIKKLDDS FR+
Sbjct: 122 GSWQDLKDHMREAGDVCFADAFKDGS---GVVEFLRYEDMKYAIKKLDDSRFRSHEGEVS 178
Query: 179 YVRVRE 184
Y+RV+E
Sbjct: 179 YIRVKE 184
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 244
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 127/176 (72%), Gaps = 4/176 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK P +AF+EFE+ RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+DG+RLRVE GRG GR SRRSEYRV+V+GLP S SWQDLKDH
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFGIGGAPRGRYGPPSRRSEYRVVVSGLPQSGSWQDLKDH 135
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
MR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 136 MREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 188
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 132/179 (73%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK PP ++FVEFE+ RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV--SRRSEYRVLVTGLPSSASWQDLK 126
D+DG+RLRVE GG G GRGRG +RRSEYR LV+GLP + SWQDLK
Sbjct: 75 DYDGYRLRVEFPRGGGGGGGGGGGLGGGPGRGRGGPPARRSEYRCLVSGLPPTGSWQDLK 134
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVRE 184
DHMR AGDVCF+ V+RDG TG+V++ Y+DMK+A K LDD++FR + +Y+RV+E
Sbjct: 135 DHMREAGDVCFADVYRDG---TGVVEFLRYEDMKYAAKHLDDTKFRSHEGETSYIRVKE 190
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 137/195 (70%), Gaps = 15/195 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP DIR ++++DLF+K+G + +DLK PP +AFVEFE+ARDA+D
Sbjct: 1 MGSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV----------SRRSEYR 110
A++ RDGYD+DG+RLRVE GG S + + + G G ++RS+YR
Sbjct: 60 AVKARDGYDYDGYRLRVEFPRGGGPGSYRGGNRNDRNRDGGGGGGRMGGRGPPAKRSQYR 119
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
V+VTGLP+S SWQDLKDHMR AGDVCF+ ++DGS G+V++ ++DMK+AIKKLDDS
Sbjct: 120 VMVTGLPTSGSWQDLKDHMREAGDVCFADTYKDGS---GVVEFLRHEDMKYAIKKLDDSR 176
Query: 171 FR-NAFSRAYVRVRE 184
FR + AY+RVRE
Sbjct: 177 FRSHEGEVAYIRVRE 191
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 134/194 (69%), Gaps = 14/194 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +Y+GNLP D+++R++EDLFYKYG I +ID+K+ P +AF+EF++ RDA D
Sbjct: 1 MGSRRESRIYIGNLPSDVKQRDLEDLFYKYGRINYIDIKLSRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGR---------SSSDRHSSHSSGRGRGVSRRSEYRV 111
A+ GRDGYD DG R+RVE+ G R S DR RRS YRV
Sbjct: 60 AVHGRDGYDMDGCRIRVEMTRGVGPRGPGGRPLYASERDRDRRPPPAPRGPPPRRSGYRV 119
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+V+GLPSS SWQDLKDHMR AGD+C++ V+RDG TG+V+YT YDDMK+AI+KLDD++F
Sbjct: 120 IVSGLPSSGSWQDLKDHMRDAGDICYADVYRDG---TGVVEYTKYDDMKYAIRKLDDTKF 176
Query: 172 R-NAFSRAYVRVRE 184
+ + +Y+RVRE
Sbjct: 177 KSHEGDTSYIRVRE 190
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 122/175 (69%), Gaps = 8/175 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR R++EDLFYKYG I I++K P RPP +AFV FE+ RDAEDAIRGRDG
Sbjct: 1 IYVGNLPLDIRTRDIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGI 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
F+G RLR E++ G R S + R RRS+YRV+V+ LP SASWQDLKDH
Sbjct: 61 SFEGARLRCEMSRGNGPRGSRQQP--------RRDLRRSDYRVIVSNLPPSASWQDLKDH 112
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
R+ G+V ++ V R + GIV++ + + + AIK+LDD+EF+N F + Y+RV+
Sbjct: 113 FRQVGEVVYTDVDRSLKSSGGIVEFASRSEQEAAIKQLDDTEFKNPFDKVYIRVK 167
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 140/228 (61%), Gaps = 21/228 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++EDLFYK+G IA+IDLK PP +AFVEFE+ RDAEDA+ RDGY
Sbjct: 11 IYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPP-FAFVEFEDPRDAEDAVHARDGY 69
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---------------SRRSEYRVLV 113
D+DG+RLRVE G + G G +RR+ YRV+V
Sbjct: 70 DYDGYRLRVEFPRGSQNSGGGHSGGRGGDGGRGGGDGGGSNGGGRSRGPPARRTNYRVIV 129
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
TGLP + SWQDLKDHMR AGDVC++ ++DG TG+V++ Y+DMK+AIKKLDDS FR+
Sbjct: 130 TGLPPTGSWQDLKDHMREAGDVCYADTYKDG---TGMVEFLRYEDMKYAIKKLDDSRFRS 186
Query: 174 AFSRA-YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYS 220
YVRV+E D + R RSYS ++R SYS
Sbjct: 187 HEGEVSYVRVKE-DSGDGNGGTRDRSRSYSPAGGGGKTRGSRGSPSYS 233
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 135/189 (71%), Gaps = 11/189 (5%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
+R++ +YVGNLP D++ R+VE+LF KYGPIA IDLK PP +AF+EFE+ DA DA+
Sbjct: 2 ARSTTKIYVGNLPPDVKTRDVENLFSKYGPIAEIDLKSRRGPP-FAFIEFEDELDAADAV 60
Query: 63 RGRDGYDFDGHRLRVELAHGGR------GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
RGRDGY+FDG+ LRVE GG G + + G G SRRS++RV+VTGL
Sbjct: 61 RGRDGYNFDGYALRVEFPRGGTASYNGSGGNFNSFRRGGFGRGGGGPSRRSDFRVVVTGL 120
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAF 175
P + SWQDLKDHMR AGDV ++ VFRDG TG+V++ Y+DMK+A++KLDDS+FR +
Sbjct: 121 PPTGSWQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAVRKLDDSKFRSHEG 177
Query: 176 SRAYVRVRE 184
+Y+RVRE
Sbjct: 178 ESSYIRVRE 186
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 150/262 (57%), Gaps = 52/262 (19%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP +R +++ED+F K+G + +DLK RPP +AFVEFE+ RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 DFDGHRLRVELA-------------HG---GRGRSSSDRHSSHSSGRGRGVSRRSEYRVL 112
DF G+RLRVE HG G S D R RR+ YRV+
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
VTGLP+S SWQDLKDHMR AGDVC++ + RDG TG+V+Y DDMK+AI+KLDD++F+
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRDG---TGVVEYARLDDMKYAIRKLDDTKFK 182
Query: 173 -NAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKA 231
+ AY+RVRE D G RS+S+SP A
Sbjct: 183 SHEGETAYIRVREDDINGGG-------------------------------RSRSRSPMA 211
Query: 232 KSSRRSPDRSRSRSASRSRSGS 253
+++R SP S SRSRS S
Sbjct: 212 RATRGSPQYSPKGGRSRSRSTS 233
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 128/177 (72%), Gaps = 5/177 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK P +AF+EFE+ RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSS-GRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
D+DG+RLRVE GRG + GR SRRSEYRVLV+GLP S SWQDLKD
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVLVSGLPQSGSWQDLKD 135
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
HMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY++V+
Sbjct: 136 HMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIQVK 189
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 128/177 (72%), Gaps = 5/177 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK P +AF+EFE+ RDA+DA+ GRDGY
Sbjct: 16 IYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 75
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSS-GRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
D+DG+RLRVE GRG + GR SRRSEYRV+V+GLP S SWQDLKD
Sbjct: 76 DYDGYRLRVEFPRSGRGSRGGFGGIGGAPRGRYGPPSRRSEYRVVVSGLPQSGSWQDLKD 135
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
HMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 136 HMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 189
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 146/254 (57%), Gaps = 33/254 (12%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
MS R + +YVGNLP DIR +++EDLFYK+G I IDLK PP +AFVEFE+ RDAE
Sbjct: 1 MSFRGNECRIYVGNLPPDIRTKDIEDLFYKFGKITFIDLKNRRGPP-FAFVEFEDPRDAE 59
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
DA RDGYD+DG+RLRVE G S+ R +RRS+YRVLV+GLP S
Sbjct: 60 DAAHARDGYDYDGYRLRVEFPRG----SAPGRGGMGPGRGRGPPARRSQYRVLVSGLPPS 115
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA- 178
SWQDLKDHMR AGDVC++ VF+DG TG+V++ Y+DMK+A+KKLDDS FR+
Sbjct: 116 GSWQDLKDHMREAGDVCYADVFKDG---TGVVEFLRYEDMKYAVKKLDDSRFRSHEGEVS 172
Query: 179 YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSP 238
Y+RVRE S R SP +RRS
Sbjct: 173 YIRVRE-----------------------DYSSRSRSRSRSYSPRRSRGSPTYSPARRSG 209
Query: 239 DRSRSRSASRSRSG 252
R+ SRS S S S
Sbjct: 210 SRTPSRSRSCSHSN 223
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 138/198 (69%), Gaps = 7/198 (3%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +Y+GNLP DIRER++EDLFYKYG I I LK R P +AFVEFE+ RDAED
Sbjct: 1 MSRYNECRIYIGNLPSDIRERDLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV--SRRSEYRVLVTGLPS 118
AI GRDGYDFDG RLRVE GG G +G G G +RRS++RV+V+GLP
Sbjct: 61 AIDGRDGYDFDGCRLRVEAPRGGGGGGGDYGRRGRGNGSGGGRGPARRSDHRVIVSGLPQ 120
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSR 177
+ SWQDLKDHMR AG+V F+ V+RDG TG+V++ +Y D+K+A+K LDDS+FR +
Sbjct: 121 TGSWQDLKDHMREAGEVYFADVYRDG---TGVVEFAHYSDVKYALKHLDDSKFRSHEGET 177
Query: 178 AYVRVREYDHRRDGSQSP 195
+YVRV+E D R S+SP
Sbjct: 178 SYVRVKE-DRGRSRSRSP 194
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 133/199 (66%), Gaps = 20/199 (10%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS+ R +YVGNLP DIR ++++DLFYK+G + +DLK PP +AFVEF++ RDAED
Sbjct: 1 MSNNDCR-IYVGNLPPDIRTKDIQDLFYKFGKVLFVDLKNQRGPP-FAFVEFDDPRDAED 58
Query: 61 AIRGRDGYDFDGHRLRVELAHGG--------------RGRSSSDRHSSHSSGRGRGVSRR 106
A+ RDGYD+DG+RLRVE G G + S S +RR
Sbjct: 59 AVHARDGYDYDGYRLRVEFPRGNGPHRSGGGGGSSSGGGSYNRGGASGGSGRSRGPPARR 118
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
S+YRVLVTGLP+S SWQDLKDHMR AGDVC++ V++DGS G+V++ YDDMK+A++KL
Sbjct: 119 SQYRVLVTGLPASGSWQDLKDHMREAGDVCYADVYKDGS---GVVEFLRYDDMKYAVRKL 175
Query: 167 DDSEFRNAFSRA-YVRVRE 184
DDS FR+ Y+RV++
Sbjct: 176 DDSRFRSHEGEVTYIRVKD 194
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 131/194 (67%), Gaps = 15/194 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R +Y+GNLP DIR+R++EDLFYKYG I ID+K+ P +AF+EF++ RDA D
Sbjct: 41 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 99
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR---------SEYRV 111
AIRGRDGY+ DG R+RVE+ G R + RG R S YRV
Sbjct: 100 AIRGRDGYELDGCRIRVEMTRGVGPRGPG-GRPLYGPDRGERDRRPPPPRGPPRRSGYRV 158
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
LVTGLP + SWQDLKDHMR AGD+C++ VF+DG TG+V+YT DDMK+AIKKLDD++F
Sbjct: 159 LVTGLPVTGSWQDLKDHMREAGDICYADVFKDG---TGVVEYTRQDDMKYAIKKLDDTKF 215
Query: 172 R-NAFSRAYVRVRE 184
+ + +Y+RV+E
Sbjct: 216 KSHEGETSYIRVKE 229
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 144/214 (67%), Gaps = 13/214 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R ++VGNLP D+++R++ED+FYKYG I ID+K P +AF+EF++ RDA D
Sbjct: 1 MAGRRDCRVFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRH---SSHSSGRGRGVSRRSEYRVLVTGLP 117
A+ GRDGYDFDG R+RVEL G R R S R RRS YRV+V+GLP
Sbjct: 60 AVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDSRSPRRGPPPRRSGYRVIVSGLP 119
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
+ SWQDLKDHMR AG++C++ VFRDG TG+V+YTNY+DMK+A++KLDD++F++
Sbjct: 120 DTGSWQDLKDHMRDAGEICYADVFRDG---TGVVEYTNYEDMKYALRKLDDTKFKSHEGE 176
Query: 178 A-YVRVREYDHRRDGSQSPSRGRSYSRGRSESRS 210
Y+RV+E + SP+R RS S ++RS
Sbjct: 177 VTYIRVKEAN-----INSPNRSRSRSHTPRKTRS 205
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 134/192 (69%), Gaps = 18/192 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+ +YVGNLPGD+RE+EVED+F+KYG I ++D+K R P +AFVEFE+ RDAEDA+R RD
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDR-------------HSSHSSGRGRGVSRRSEYRVLV 113
GY+FDG R+RVE G R S R GRG G RR+ YRV+V
Sbjct: 68 GYEFDGRRIRVEFTRGVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIV 127
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR- 172
GLP + SWQDLKDHMR AGDVC++ V RDG TG+V++T Y+D+K+A++KLDD++FR
Sbjct: 128 EGLPPTGSWQDLKDHMRDAGDVCYADVARDG---TGVVEFTRYEDVKYAVRKLDDTKFRS 184
Query: 173 NAFSRAYVRVRE 184
+ AY+RVRE
Sbjct: 185 HEGETAYIRVRE 196
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 125/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSEYRV+V+GLP S SWQDL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 137 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 29/181 (16%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKI-----PPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++ D+FYKYG IA +DLK PP +AFVEFE+ RDAEDA++
Sbjct: 11 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPP----FAFVEFEDPRDAEDAVK 66
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GRDG++FDG+R+RVE GG G RRS++RV V+GLP + SWQ
Sbjct: 67 GRDGHEFDGYRIRVEFPRGGSGPPP----------------RRSDFRVQVSGLPPTGSWQ 110
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDV F+ VF+DG TG+V++ YDDMK AI+ LDDS+FR + +Y+RV
Sbjct: 111 DLKDHMREAGDVLFTDVFKDG---TGVVEFARYDDMKFAIRNLDDSKFRSHEGETSYIRV 167
Query: 183 R 183
+
Sbjct: 168 K 168
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 125/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSEYRV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 138 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 131/194 (67%), Gaps = 15/194 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ R +Y+GNLP DIR+R++EDLFYKYG I ID+K+ P +AF+EF++ RDA D
Sbjct: 1 MAGRRDCRVYIGNLPPDIRQRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR---------SEYRV 111
AIRGRDGY+ DG R+RVE+ G R + RG R S YRV
Sbjct: 60 AIRGRDGYELDGCRIRVEMTRGVGPRGPG-GRPLYGPDRGERDRRPPPPRGPPRRSGYRV 118
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
LVTGLP + SWQDLKDHMR AGD+C++ VF+DG TG+V+YT DDMK+AIKKLDD++F
Sbjct: 119 LVTGLPVTGSWQDLKDHMREAGDICYADVFKDG---TGVVEYTRQDDMKYAIKKLDDTKF 175
Query: 172 R-NAFSRAYVRVRE 184
+ + +Y+RV+E
Sbjct: 176 KSHEGETSYIRVKE 189
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 132/192 (68%), Gaps = 12/192 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +YVGNLP ++++R++EDLF KYG I ID+K P +AF+EFE++RDAED
Sbjct: 1 MGSRRDCRVYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAP-FAFLEFEDSRDAED 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR-------SEYRVLV 113
AIRGRDGYD DG R+RVE+ G R R G R S YRV++
Sbjct: 60 AIRGRDGYDLDGCRIRVEMTRGVGPRGPGGRPIYGGGGYDRRPPAPRGPPVRRSGYRVII 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR- 172
+GLP+S SWQDLKDHMR AGD+C++ V++DG TG+V+YT YDDMK+A++KLDD++F+
Sbjct: 120 SGLPASGSWQDLKDHMRDAGDICYADVYKDG---TGVVEYTKYDDMKYAVRKLDDTKFKS 176
Query: 173 NAFSRAYVRVRE 184
+ +Y+RVRE
Sbjct: 177 HEGDTSYIRVRE 188
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/243 (47%), Positives = 153/243 (62%), Gaps = 32/243 (13%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR SR +YVGNLP +R ++VED+F KYG + ++DLK R P +AFVEFE+ARDAEDA+
Sbjct: 2 SRESR-IYVGNLPTTVRAKDVEDIFSKYGRVLYVDLK-DRRQPYFAFVEFEDARDAEDAV 59
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYR------------ 110
RGRDGYD++G+RLRVE + SGR VSR +
Sbjct: 60 RGRDGYDYEGYRLRVEFPR--GLGPRGPGGRPYDSGRNLSVSRSACGGGSSSGSRRASYR 117
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
V+V+GLP+S SWQDLKDHMR AGDVC++ V RDG TGIV+Y Y+DMK+A++KLDD++
Sbjct: 118 VIVSGLPASGSWQDLKDHMREAGDVCYTDVLRDG---TGIVEYGRYEDMKYALRKLDDTK 174
Query: 171 FR-NAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGR---SYSRSRSQS 226
F+ + +Y+RV+E D +S R++SR RS SR + SYS S S S
Sbjct: 175 FKSHEGETSYIRVKE-----DNGES----RAHSRSRSPVGRASRGSPQYSPSYSNSGSHS 225
Query: 227 KSP 229
SP
Sbjct: 226 HSP 228
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 128/180 (71%), Gaps = 8/180 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK P +AF+EFE+ RDA+DA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV----SRRSEYRVLVTGLPSSASWQD 124
D+DG+RLRVE GRG G RG SRRSEYRV+V+GLP S SWQD
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGFGGGGVGGAPRGRYGPPSRRSEYRVIVSGLPQSGSWQD 136
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
LKDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++FR + AYVRV+
Sbjct: 137 LKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYVRVK 193
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 130/195 (66%), Gaps = 21/195 (10%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+ +YVGNLPGD+RE+EVED+F+KYG I +ID+K R P +AFVEFE+ RDAEDA+R RD
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSE----------------YR 110
GY+FDG R+RVE G R R + G RG YR
Sbjct: 68 GYEFDGRRIRVEFTRGVGPRGPGGRPLNEEGGGYRGGGDFRGGRGGGRGGGGPQRRTGYR 127
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
V+V GLP + SWQDLKDHMR AGDVC++ V RDG TG+V++T YDD+K+A++KLDD++
Sbjct: 128 VIVEGLPPTGSWQDLKDHMREAGDVCYADVARDG---TGVVEFTRYDDVKYAVRKLDDTK 184
Query: 171 FR-NAFSRAYVRVRE 184
FR + AY+RVRE
Sbjct: 185 FRSHEGETAYIRVRE 199
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 134/197 (68%), Gaps = 22/197 (11%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
+ +YVGNLPGD+R++EVED+F+KYG I +ID+K R P +AFVEFE+ RDAEDA+R R
Sbjct: 9 DQKVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIK-SGRGPAFAFVEFEDHRDAEDAVRAR 67
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG-----------------RGRGVSRRSE 108
DGY+FDG R+RVE G R R + G RG G RR+
Sbjct: 68 DGYEFDGRRIRVEFTRGVGPRGPGGRPLNDDGGYSGGRDRGDYRGGRGGGRGGGPQRRTG 127
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDD 168
YRV+V GLP + SWQDLKDHMR AGDVC++ V RDG TG+V++T YDD+K+A++KLDD
Sbjct: 128 YRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARDG---TGVVEFTRYDDVKYAVRKLDD 184
Query: 169 SEFR-NAFSRAYVRVRE 184
++FR + AY+RVRE
Sbjct: 185 TKFRSHEGETAYIRVRE 201
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 128/180 (71%), Gaps = 8/180 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV----SRRSEYRVLVTGLPSSASWQD 124
D+DG+RLRVE GRG G RG SRRSEYRV+V+GLP S SWQD
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQD 137
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
LKDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 138 LKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 194
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 132/193 (68%), Gaps = 18/193 (9%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
+ +YVGNLPGD+RE+EVED+F+KYG I ++D+K R P +AFVEFE+ RDAEDA+R R
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK-SGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 66 DGYDFDGHRLRVELA-------------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVL 112
DGY+FDG R+RVE G D GRG G RR+ YRV+
Sbjct: 67 DGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVI 126
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
V GLP + SWQDLKDHMR AGDVC++ V RDG TG+V++T Y+D+K+A++KLDD++FR
Sbjct: 127 VEGLPPTGSWQDLKDHMRDAGDVCYADVARDG---TGVVEFTRYEDVKYAVRKLDDTKFR 183
Query: 173 -NAFSRAYVRVRE 184
+ AY+RVRE
Sbjct: 184 SHEGETAYIRVRE 196
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 145 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 204
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 205 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 264
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 265 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 320
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 118/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSEYRV+V+GLP S SWQDL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++FR
Sbjct: 137 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 180
>gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio]
gi|182889684|gb|AAI65510.1| Sfrs1 protein [Danio rerio]
Length = 258
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 124/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGQPFAFVEFEDPRDAEDAVYGRDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSEYRV+V+GLP S SWQDL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDL 136
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 137 KDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 192
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 167/279 (59%), Gaps = 32/279 (11%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPR-PPGYAFVEFEEARDAEDAIRGRD 66
T+YVGNLP D+RE+E+ED+F+KYG I +ID+K R P +AF++F++ RDA++A+R RD
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSS---GRGRGVSRRSEYRVLVTGLPSSASWQ 123
GY+FDG RLRVE G R R + + GR G +RS YR++V GLP S SWQ
Sbjct: 65 GYEFDGKRLRVEFPRGQGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ 124
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
D+KDH+++AG++C++ V G+V++ Y+D+++A +K DD++FR + AY+R+
Sbjct: 125 DIKDHLKQAGEICYANVH----NGEGVVEFERYEDLEYAFRKYDDTKFRSHKGETAYIRL 180
Query: 183 REYDHRRDGSQSPSRGRSYSRGRSE---------------------SRSRSRSRGRSYSR 221
+E D ++ R RS SR +S S+SRSRS + R
Sbjct: 181 KE-DKSEYAKENKRRTRSISRSKSPIRGRSSSRSKSSIRGRRTGSASKSRSRSPVSRHHR 239
Query: 222 SRSQSKSPKAKSSRRSPDRSRSRSASRSRSGSKPRSLSR 260
RS+S SP + SR SR R A RS SG+ R +R
Sbjct: 240 DRSESGSPARRVSRSRSPISRQRPA-RSESGTPARRATR 277
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 132/194 (68%), Gaps = 15/194 (7%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPR-PPGYAFVEFEEARDAEDA 61
SR + +YVGNLP D + R++E+LF KYGPIA IDLK R P +AFVEFE+ DA DA
Sbjct: 2 SRTTHKIYVGNLPPDAKTRDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDA 61
Query: 62 IRGRDGYDFDGHRLRVELAHGG----------RGRSSSDRHSSHSSGRGRGVSRRSEYRV 111
+RGRDGY+FDG+ LRVEL G + + G G SRRS++RV
Sbjct: 62 VRGRDGYNFDGYALRVELPRTGSYNNGNGGPNNNQFRRGGFNRGGGGGSSGPSRRSDFRV 121
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+VTGLP + SWQDLKDHMR AGDV ++ VFRDG TG+V++ Y+DMK+AI++LDDS+F
Sbjct: 122 IVTGLPPTGSWQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAIRRLDDSKF 178
Query: 172 R-NAFSRAYVRVRE 184
R + +Y+RVRE
Sbjct: 179 RSHEGESSYIRVRE 192
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 82 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 141
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 142 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 201
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 202 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 257
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 129/197 (65%), Gaps = 23/197 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP +R +++ED+F K+G + +DLK RPP +AFVEFE+ RDAEDA+R RDGY
Sbjct: 7 IYVGNLPTSVRTKDIEDIFTKFGKVLFVDLK-DKRPPYFAFVEFEDPRDAEDAVRSRDGY 65
Query: 69 DFDGHRLRVEL-------------AHG---GRGRSSSDRHSSHSSGRGRGVSRRSEYRVL 112
DF G+RLRVE HG G S D R RR+ YRV+
Sbjct: 66 DFYGYRLRVEFPRGVGPRGPGGRPLHGNDRGYSGSRGDGGYGGGGSGSRSGGRRTNYRVI 125
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
VTGLP+S SWQDLKDHMR AGDVC++ + RDG TG+V+Y DDMK+AI+KLDD++F+
Sbjct: 126 VTGLPTSGSWQDLKDHMREAGDVCYADITRDG---TGVVEYARLDDMKYAIRKLDDTKFK 182
Query: 173 -NAFS--RAYVRVREYD 186
+ F AY+RVRE D
Sbjct: 183 SHEFQGETAYIRVREDD 199
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 127/198 (64%), Gaps = 26/198 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSS----------------------GRGRGVSRR 106
D+DG+RLRVE GRG GR SRR
Sbjct: 78 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGAPRGRYGPPSRR 137
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
SEYRV+V+GLP S SWQDLKDHMR AGDVC++ VFRDG TG+V++ +DM +A++KL
Sbjct: 138 SEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKL 194
Query: 167 DDSEFR-NAFSRAYVRVR 183
D+++FR + AY+RV+
Sbjct: 195 DNTKFRSHEGETAYIRVK 212
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 108 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 167
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 168 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 223
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|21954085|gb|AAK93589.2| putative SF2/ASF splicing modulator Srp30 protein [Arabidopsis
thaliana]
Length = 207
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/127 (70%), Positives = 102/127 (80%)
Query: 62 IRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSAS 121
I GRDGYDFDG RLRVE+AHGGR S S S S R SRRS+Y VLVTGLP SAS
Sbjct: 1 IYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYHVLVTGLPPSAS 60
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVR 181
WQDLKDHMR+AGDVCFS+VF D G +G+VDY+NYDDMK+AI+KLD +EFRNAFS AY+R
Sbjct: 61 WQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYIR 120
Query: 182 VREYDHR 188
VREY+ R
Sbjct: 121 VREYESR 127
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 127/195 (65%), Gaps = 23/195 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 107
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-------------------SRRSEY 109
D+DG+RLRVE GRG G G SRRSEY
Sbjct: 108 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 167
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
RV+V+GLP S SWQDLKDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD++
Sbjct: 168 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNT 224
Query: 170 EFR-NAFSRAYVRVR 183
+FR + AY+RV+
Sbjct: 225 KFRSHEGETAYIRVK 239
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 127/195 (65%), Gaps = 23/195 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-------------------SRRSEY 109
D+DG+RLRVE GRG G G SRRSEY
Sbjct: 110 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 169
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
RV+V+GLP S SWQDLKDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD++
Sbjct: 170 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNT 226
Query: 170 EFR-NAFSRAYVRVR 183
+FR + AY+RV+
Sbjct: 227 KFRSHEGETAYIRVK 241
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 127/189 (67%), Gaps = 17/189 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-------------SRRSEYRVLVTG 115
D+DG+RLRVE GRG G G G SRRSEYRV+V+G
Sbjct: 77 DYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVSG 136
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NA 174
LP S SWQDLKDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++FR +
Sbjct: 137 LPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHE 193
Query: 175 FSRAYVRVR 183
AY+RV+
Sbjct: 194 GETAYIRVK 202
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 127/190 (66%), Gaps = 18/190 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ RDGY
Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV--------------SRRSEYRVLVT 114
D+DG+RLRVE GRG G G G SRRSEYRV+V+
Sbjct: 77 DYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIVS 136
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-N 173
GLP S SWQDLKDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++FR +
Sbjct: 137 GLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSH 193
Query: 174 AFSRAYVRVR 183
AY+RV+
Sbjct: 194 EGETAYIRVK 203
>gi|291228500|ref|XP_002734208.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 244
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 128/193 (66%), Gaps = 21/193 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK PP ++FVEFE+ RDAEDA+RGRDGY
Sbjct: 16 IYVGNLPPDIRVKDIEDIFYKYGNILDIDLKNRRGPP-FSFVEFEDKRDAEDAVRGRDGY 74
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR----------------SEYRVL 112
D+DG+RLRVE GGR R G G G SEYR L
Sbjct: 75 DYDGYRLRVEFPRGGRAGGGPPRGIGGGGGGGGGGGGGLGGGPGRGRGGPPARRSEYRCL 134
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
V+GLP + SWQDLKDHMR AGDVCF+ V+RDG TG+V++ Y+DMK+A K LDD++FR
Sbjct: 135 VSGLPPTGSWQDLKDHMREAGDVCFADVYRDG---TGVVEFLRYEDMKYAAKHLDDTKFR 191
Query: 173 -NAFSRAYVRVRE 184
+ +Y+RV+E
Sbjct: 192 SHEGETSYIRVKE 204
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 127/195 (65%), Gaps = 23/195 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 37 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 96
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV-------------------SRRSEY 109
D+DG+RLRVE GRG G G SRRSEY
Sbjct: 97 DYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGRYGPPSRRSEY 156
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
RV+V+GLP S SWQDLKDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD++
Sbjct: 157 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNT 213
Query: 170 EFR-NAFSRAYVRVR 183
+FR + AY+RV+
Sbjct: 214 KFRSHEGETAYIRVK 228
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 167/282 (59%), Gaps = 35/282 (12%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPR-PPGYAFVEFEEARDAEDAIRGRD 66
T+YVGNLP ++RE+E+ED+F+KYG I +ID+K R P +AF++F++ RDA++A+R RD
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSS---GRGRGVSRRSEYRVLVTGLPSSASWQ 123
GY+FDG RLRVE G R R + + GR G +RS YR++V GLP S SWQ
Sbjct: 65 GYEFDGKRLRVEFPRGQGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ 124
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
D+KDH+++AG++C++ V G+V++ Y+D+++AI+K DD++FR + AY+R+
Sbjct: 125 DIKDHLKQAGEICYANVH----NGEGVVEFERYEDLEYAIRKYDDTKFRSHKGETAYIRL 180
Query: 183 REYDHRRDGSQSPSRGRSYSRGR------------------------SESRSRSRSRGRS 218
+E D ++ R RS SR + S S+SRSRS
Sbjct: 181 KE-DKSEYAKENKRRTRSISRSKSPIRGRCSRSSSRSKSSIRGRRNGSASKSRSRSPVSR 239
Query: 219 YSRSRSQSKSPKAKSSRRSPDRSRSRSASRSRSGSKPRSLSR 260
R RS+S SP + SR SR R A RS SG+ R +R
Sbjct: 240 QHRDRSESGSPARRVSRSRSPISRQRRA-RSESGTPARRATR 280
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 123/182 (67%), Gaps = 7/182 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 50 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 109
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 110 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 169
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREY 185
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + Y R+ +
Sbjct: 170 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR-SHEVGYTRILFF 225
Query: 186 DH 187
D
Sbjct: 226 DQ 227
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 119/164 (72%), Gaps = 11/164 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+DG+RLRVE GRG R+ SRRSE RV+V+GLP S SWQDLKDH
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRRGRYGPP--------SRRSENRVVVSGLPPSGSWQDLKDH 129
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
MR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 130 MREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 170
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 123/182 (67%), Gaps = 7/182 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREY 185
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + Y R+ +
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR-SHEVGYTRILFF 193
Query: 186 DH 187
D
Sbjct: 194 DQ 195
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo sapiens]
Length = 292
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 126/176 (71%), Gaps = 6/176 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++EDLFYK+G I IDLK P +AFVEFE+ RD+ DA+ RDGY
Sbjct: 17 IYVGNLPPDIRSKDIEDLFYKFGAIRDIDLKNRRGGPPFAFVEFEDPRDSGDAVYERDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+DG+RLRVE GGRG + R SRRS+YRV+V+GLP S SWQDLKDH
Sbjct: 77 DYDGYRLRVEFPRGGRGGGGRGMGPPRT--RYGPPSRRSDYRVVVSGLPQSGSWQDLKDH 134
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
MR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 135 MREAGDVCYTDVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 187
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ +DAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPQDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGAVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2 [Desmodus
rotundus]
Length = 207
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 121/187 (64%), Gaps = 16/187 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+GNLP D+ E++++D+FYK+G I IDLK P RPP + F+ F++ARDAE+A+R RDGY
Sbjct: 4 IYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGY 63
Query: 69 DFDGHRLRVELAHGGR-------------GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTG 115
D DG RLRVE++ G R GRG +++EYRV+VTG
Sbjct: 64 DMDGSRLRVEISRGRRDPFGMGGGGHGGRMGMPMGGGRGGFGGRGGAGFQQTEYRVIVTG 123
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAF 175
LP SASWQDLKDHMR+AG+ ++ V G GIV + DDM +A++KLD S+FRN F
Sbjct: 124 LPPSASWQDLKDHMRKAGEPTYTDVDHKGG---GIVHFRTRDDMDYALRKLDGSDFRNPF 180
Query: 176 SRAYVRV 182
++ + V
Sbjct: 181 EKSRISV 187
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 123/179 (68%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+ G+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYYGYRLRVEFPRSGRGTGRGGSGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 193
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFR 181
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 166/282 (58%), Gaps = 35/282 (12%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPR-PPGYAFVEFEEARDAEDAIRGRD 66
T+YVGNLP D+RE+E+ED+F+KYG I +ID+K R P +AF++F++ RDA++A+R D
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACD 64
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSS---GRGRGVSRRSEYRVLVTGLPSSASWQ 123
GY+FDG RLRVE G R R + + GR G +RS YR++V GLP S SWQ
Sbjct: 65 GYEFDGKRLRVEFPRGKGPRGPGGRPTRDNGSRFGRNGGPPKRSNYRLIVEGLPRSGSWQ 124
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
D+KDH+++AG++C++ V G+V++ Y+++++AI+K DD++FR + AY+R+
Sbjct: 125 DIKDHLKQAGEICYANVH----NGEGVVEFERYENLEYAIRKYDDTKFRSHKGETAYIRL 180
Query: 183 REYDHRRDGSQSPSRGRSYSRGRSE------------------------SRSRSRSRGRS 218
+E D ++ R RS SR +S S+SRSRS
Sbjct: 181 KE-DKSEYAKENKRRTRSISRSKSPNRGRCSRSSSRSKSSIRGRRTGSASKSRSRSPVSR 239
Query: 219 YSRSRSQSKSPKAKSSRRSPDRSRSRSASRSRSGSKPRSLSR 260
R RS+S SP + SR SR R A RS SG+ R +R
Sbjct: 240 QHRDRSESGSPARRVSRSRSPISRQRRA-RSESGTPARRATR 280
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 121/176 (68%), Gaps = 7/176 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRR+E RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRAENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYV 180
KDHMR AGDVC++ V+RDG TG+V+ +DM +A++KLD+++FR + + AY+
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVVECVPKEDMTYAVRKLDNTKFRSHEWETAYI 190
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 27/190 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGY--------------AFVEFEE 54
+YVGNLP DIRE+++ED+FYK+G +A IDLK RPP + AFVEF +
Sbjct: 18 IYVGNLPPDIREKDIEDMFYKFGSVADIDLK-NKRPPSFSSSGSERERFGTPFAFVEFYD 76
Query: 55 ARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVT 114
RDA+DA+ RDGY++DG+R+RVE G +G S RS YRV+V+
Sbjct: 77 RRDADDAVLARDGYNYDGYRIRVEFPRGTKGFKGSRPRGPPPR--------RSSYRVIVS 128
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-N 173
GLPS+ SWQDLKDHMR AGDVC++ V+RDG TG+V++ +DMK+A+K+LDD++FR +
Sbjct: 129 GLPSTGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFLRPEDMKYAVKQLDDTKFRSH 185
Query: 174 AFSRAYVRVR 183
+Y+RV+
Sbjct: 186 EGDVSYIRVK 195
>gi|428170004|gb|EKX38933.1| hypothetical protein GUITHDRAFT_39633, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 123/178 (69%), Gaps = 13/178 (7%)
Query: 11 VGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED----AIRGRD 66
VGNLP DIRER+++DLFYKYG I I++K P RPP +AFVEF+ DAED A+ D
Sbjct: 1 VGNLPLDIRERDIDDLFYKYGRIRDIEVKTPSRPPAFAFVEFDNLYDAEDAGMCALPCTD 60
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRG--RGVSRRSEYRVLVTGLPSSASWQD 124
G F+G RLRVE++ RG +++ + SG+ R + RRS+YRV+++GLP SASWQD
Sbjct: 61 GVMFEGARLRVEMS---RGTAATYGYDKRGSGKAPPRNL-RRSDYRVIISGLPKSASWQD 116
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
LKD R+AG++ ++ V R G GIV++ N DD +AIKK DD+EF N F R Y+RV
Sbjct: 117 LKDFFRQAGEIVYTDVDRQGG---GIVEFANEDDRDYAIKKFDDTEFSNPFDRGYIRV 171
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 121/179 (67%), Gaps = 7/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAED + GRDGY
Sbjct: 70 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 129
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+ G+RLRVE GRG SRR E RV+V+GLP S SWQDL
Sbjct: 130 DYYGYRLRVEFPPSGRGTGRGGSGGGGGGAPRGRYGPPSRRCENRVVVSGLPPSGSWQDL 189
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG++++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 190 KDHMREAGDVCYADVYRDG---TGVMEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 245
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 135 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 189
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 190 GRNGYDYGQCRLRVEFP-----RTYGSRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQ 244
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 245 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 301
>gi|301790878|ref|XP_002930446.1| PREDICTED: splicing factor, arginine/serine-rich 9-like [Ailuropoda
melanoleuca]
Length = 253
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 124/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 48 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 102
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE GR+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 103 GRNGYDYGQCRLRVEFPRTYGGRAGWPR-----GGRNGPPTRRSDFRVLVSGLPPSGSWQ 157
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 158 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 214
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 264
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 132/200 (66%), Gaps = 21/200 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VEDLFYKYG I IDLK P +AFV+F++ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV------------SRRSEYRVLVTGL 116
D+DG+RLRVE GRG G G G SRRSE RV+V+GL
Sbjct: 77 DYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGGGGGGMGPPRGRYGPPSRRSENRVVVSGL 136
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAF 175
P S SWQDLKDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++FR +
Sbjct: 137 PPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEG 193
Query: 176 SRAYVRVREYDHRRDGSQSP 195
AY+RV+ DG +SP
Sbjct: 194 ETAYIRVK-----MDGPRSP 208
>gi|57164147|ref|NP_001009255.1| serine/arginine-rich splicing factor 9 [Rattus norvegicus]
gi|92058728|sp|Q5PPI1.1|SRSF9_RAT RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|56388745|gb|AAH87684.1| Splicing factor, arginine/serine rich 9 [Rattus norvegicus]
gi|149063569|gb|EDM13892.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 131/201 (65%), Gaps = 34/201 (16%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVEL--AHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSAS 121
GR+GYD+ RLRVE A+GGRG + R +RRS++RVLV+GLP S S
Sbjct: 71 GRNGYDYGQCRLRVEFPRAYGGRG-------GWPRASRNGPPTRRSDFRVLVSGLPPSGS 123
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYV 180
WQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+
Sbjct: 124 WQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYI 180
Query: 181 RVREYDHRRDGSQSPSRGRSY 201
RV P RG SY
Sbjct: 181 RV-----------YPERGTSY 190
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 116/167 (69%), Gaps = 6/167 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+ G+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYYGYRLRVEFPPSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVC++ V+RDG TG++++ +DM +A++KLD+++FR
Sbjct: 138 KDHMREAGDVCYADVYRDG---TGVMEFVRKEDMTYAVRKLDNTKFR 181
>gi|281340832|gb|EFB16416.1| hypothetical protein PANDA_020890 [Ailuropoda melanoleuca]
Length = 215
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 124/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 10 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 64
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE GR+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 65 GRNGYDYGQCRLRVEFPRTYGGRAGWPR-----GGRNGPPTRRSDFRVLVSGLPPSGSWQ 119
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 120 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 176
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 122/187 (65%), Gaps = 15/187 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR R++EDLFYK+G IA +DLK PP + FVEFE+ RDA DA+ RDGY
Sbjct: 9 VYVGNLPPDIRARDIEDLFYKFGKIAFVDLKTRRGPP-FCFVEFEDPRDASDAVHERDGY 67
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRS----------EYRVLVTGLPS 118
++DG+ LRVE GG S R G G EYRVLV+GLP
Sbjct: 68 NYDGYTLRVEFPRGGGPGGSRSRGGGGGYGFRGGRGPPGGRGGPPSRRSEYRVLVSGLPP 127
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
S SWQDLKDHMR AGDVC++ V++DG TG+V++ +DMKHA+ KLDD++FR+
Sbjct: 128 SGSWQDLKDHMREAGDVCYTDVYKDG---TGVVEFLRKEDMKHAVSKLDDTKFRSHEGEV 184
Query: 179 -YVRVRE 184
Y+RV+E
Sbjct: 185 SYIRVKE 191
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 116/168 (69%), Gaps = 6/168 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAED + GRDGY
Sbjct: 48 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGY 107
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+ G+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 108 DYYGYRLRVEFPPSGRGTGRGGSGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 167
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR+
Sbjct: 168 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRS 212
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 124/182 (68%), Gaps = 23/182 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RER++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 17 IYVGNLPSDVRERDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 71
Query: 64 GRDGYDFDGHRLRVEL--AHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSAS 121
GR+GYD+ RLRVE +GGRG R +RRS++RVLV+GLP S S
Sbjct: 72 GRNGYDYGQCRLRVEFPRTYGGRG-------GWPRGARNGPPTRRSDFRVLVSGLPPSGS 124
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYV 180
WQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+
Sbjct: 125 WQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYI 181
Query: 181 RV 182
RV
Sbjct: 182 RV 183
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGSRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGSRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|13385016|ref|NP_079849.1| serine/arginine-rich splicing factor 9 [Mus musculus]
gi|66774167|sp|Q9D0B0.1|SRSF9_MOUSE RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|12847866|dbj|BAB27740.1| unnamed protein product [Mus musculus]
gi|15126569|gb|AAH12217.1| Splicing factor, arginine/serine rich 9 [Mus musculus]
gi|148687919|gb|EDL19866.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Mus
musculus]
Length = 222
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 124/182 (68%), Gaps = 23/182 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 17 IYVGNLPSDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 71
Query: 64 GRDGYDFDGHRLRVEL--AHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSAS 121
GR+GYD+ RLRVE +GGRG R +RRS++RVLV+GLP S S
Sbjct: 72 GRNGYDYGQCRLRVEFPRTYGGRG-------GWPRGARNGPPTRRSDFRVLVSGLPPSGS 124
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYV 180
WQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+
Sbjct: 125 WQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYI 181
Query: 181 RV 182
RV
Sbjct: 182 RV 183
>gi|302828648|ref|XP_002945891.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
gi|300268706|gb|EFJ52886.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
Length = 288
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 121/180 (67%), Gaps = 6/180 (3%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VGNLP D+RE+E++++FYK+G I ID+K P RPPG+AF+EF++ R AE+A R R+
Sbjct: 10 RAIFVGNLPIDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFIEFDDPRSAEEAARRRN 69
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
Y+F G R+RVE+A GG G S G R + +R+ V GLP SASWQDLK
Sbjct: 70 NYEFAGMRMRVEIARGGEGSGS---QQPLRIGY-RPIRNTLGFRLYVKGLPRSASWQDLK 125
Query: 127 DHMRRAGDVCFSQVFRDG-SGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA-YVRVRE 184
D +RR ++++F+D G+V++ + DDMK A++KLDDSEF N F + YVR+ E
Sbjct: 126 DFVRRVCKPLYTEIFKDHRDNVLGVVEFESKDDMKAALRKLDDSEFTNPFDKGHYVRLVE 185
>gi|395833916|ref|XP_003789963.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Otolemur garnettii]
gi|395833918|ref|XP_003789964.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2
[Otolemur garnettii]
Length = 221
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 123/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ + GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGGQGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 121/179 (67%), Gaps = 6/179 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP D++ER++EDLF+KYG I I+LK +AFV FE+ RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 DFDGHRLRVEL--AHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
F +LRVE + G + + GR +RRSE+RV+VTGLP + SWQDLK
Sbjct: 66 GFGDCKLRVEYPRSSGSKFSGPAGGGGGGPRGRFGPPTRRSEFRVIVTGLPPTGSWQDLK 125
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVRE 184
DHMR AGDVCF+ V RDG G+V++ +DM++A+++LD +EFR + AY+RV E
Sbjct: 126 DHMREAGDVCFADVQRDGE---GVVEFLRREDMEYALRRLDSTEFRSHQGETAYIRVME 181
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 116/167 (69%), Gaps = 7/167 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR R++E F ++G + +DLK PP +AFVEFE+ARDAEDA+R +DGY
Sbjct: 12 IYVGNLPPDIRSRDIESCFERFGKVVAVDLKNRKGPP-FAFVEFEDARDAEDAVRYKDGY 70
Query: 69 DFDGHRLRVELAHGG---RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
+ DG++LRVE G G + +R + +G SR + +R ++GLP+S SWQDL
Sbjct: 71 ELDGYKLRVEFPRGSGVHPGYNQRNRMLAGRNGCRTNASRHTGFRCYISGLPASGSWQDL 130
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KDHMR AGDVCFS V+++G+ G+V+Y +D+++A+ L++S FR
Sbjct: 131 KDHMREAGDVCFSDVYKNGN---GVVEYMRAEDLEYALANLNESRFR 174
>gi|384950066|gb|AFI38638.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 221
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 121/175 (69%), Gaps = 9/175 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP D+RE+++EDLFYKYG I I+LK +AFV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQDLKDH
Sbjct: 76 DYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDH 130
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
MR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 131 MREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|444723179|gb|ELW63840.1| Serine/arginine-rich splicing factor 9 [Tupaia chinensis]
Length = 235
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 30 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNQHGLVP-----FAFVRFEDPRDAEDAIY 84
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 85 GRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQ 139
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 140 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 196
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 126/192 (65%), Gaps = 12/192 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DI REV+D+FYKYG + +DLK +AFVEF RDA +A+ GRDGY
Sbjct: 17 IYVGNLPPDIGTREVKDMFYKYGTVRDVDLKNRRWGRPFAFVEFNSPRDAHNAVHGRDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D++G+RLRVE R R + G SRRS+ RVLV+GLP S SWQDLKDH
Sbjct: 77 DYEGYRLRVEFPRNYRAIYGGGRGLLETRGTS---SRRSDNRVLVSGLPPSGSWQDLKDH 133
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVREYDH 187
MR AG VC++ V RDGS G+V++ +DM +A++KL++++FR + AY+RVR
Sbjct: 134 MREAGYVCYAAVRRDGS---GVVEFVWKEDMSYAVRKLNNTKFRSHKGETAYIRVRI--- 187
Query: 188 RRDGSQSPSRGR 199
D ++SP+ GR
Sbjct: 188 --DEARSPNCGR 197
>gi|307078155|ref|NP_001182495.1| splicing factor, arginine/serine-rich 9 [Sus scrofa]
Length = 221
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|357134013|ref|XP_003568614.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Brachypodium distachyon]
Length = 169
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 106/170 (62%), Gaps = 29/170 (17%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYK--------------------------YGPIA 34
MS S T+Y+GNLP DIRERE EDLFYK YG I
Sbjct: 1 MSRWNSCTVYLGNLPNDIREREHEDLFYKDGVTPHHLDSTCGYHPIWVMQEDLHKYGRIL 60
Query: 35 HIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSS 94
IDLK PPR P YAFVE DAEDAI G DGYDF ++VELAHGG G S DR S
Sbjct: 61 DIDLKXPPRRPVYAFVEVIYRCDAEDAIYGHDGYDFX--IIQVELAHGGTG-PSFDRLRS 117
Query: 95 HSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDG 144
+SS R +R S YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+
Sbjct: 118 YSSSGRREAARHSNYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREA 167
>gi|4506903|ref|NP_003760.1| serine/arginine-rich splicing factor 9 [Homo sapiens]
gi|114647286|ref|XP_001160785.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Pan
troglodytes]
gi|297693182|ref|XP_002823915.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pongo abelii]
gi|332262536|ref|XP_003280317.1| PREDICTED: serine/arginine-rich splicing factor 9 [Nomascus
leucogenys]
gi|402887863|ref|XP_003907300.1| PREDICTED: serine/arginine-rich splicing factor 9 [Papio anubis]
gi|410047369|ref|XP_003952371.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|3929377|sp|Q13242.1|SRSF9_HUMAN RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Pre-mRNA-splicing factor SRp30C; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|1049078|gb|AAA93069.1| SRp30c [Homo sapiens]
gi|4099429|gb|AAD00626.1| splicing factor SRp30c [Homo sapiens]
gi|62739648|gb|AAH93973.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|62740064|gb|AAH93971.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|119618600|gb|EAW98194.1| splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|261861074|dbj|BAI47059.1| splicing factor, arginine/serine-rich 9 [synthetic construct]
gi|380817540|gb|AFE80644.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|383422449|gb|AFH34438.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|410227624|gb|JAA11031.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227626|gb|JAA11032.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227628|gb|JAA11033.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263740|gb|JAA19836.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263742|gb|JAA19837.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263744|gb|JAA19838.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305344|gb|JAA31272.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305346|gb|JAA31273.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305348|gb|JAA31274.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340983|gb|JAA39438.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340985|gb|JAA39439.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
Length = 221
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 115/175 (65%), Gaps = 11/175 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP D+RER+++DLFYKYG I ID+K P RPP YAFV FE+ RDA+DA+ RD Y
Sbjct: 5 IYVGNLPMDVRERDLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDNY 64
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
DFDG R+RVELA+ + R G GR R+++R+ V+ LP SWQDLKD+
Sbjct: 65 DFDGGRIRVELAN-----ETPRRRDDRGFGGGRN---RTDFRLEVSDLPDRTSWQDLKDY 116
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
+ GDV ++ V R+G G+V++ +DM A +KLD S FRN F +RVR
Sbjct: 117 FKPVGDVLYADVSRNGE---GVVEFATKEDMFAAKRKLDGSTFRNPFDSREIRVR 168
>gi|426247382|ref|XP_004017465.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Ovis
aries]
Length = 226
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 124/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I+ I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLD+++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|134085783|ref|NP_001076867.1| serine/arginine-rich splicing factor 9 [Bos taurus]
gi|358421698|ref|XP_003585083.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Bos taurus]
gi|133777441|gb|AAI14700.1| SFRS9 protein [Bos taurus]
gi|296478484|tpg|DAA20599.1| TPA: splicing factor, arginine/serine-rich 9 [Bos taurus]
Length = 221
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 124/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I+ I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLD+++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|348585449|ref|XP_003478484.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Cavia
porcellus]
gi|351702214|gb|EHB05133.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 221
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRTGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|417397369|gb|JAA45718.1| Putative splicing factor arginine/serine-rich 9-like protein
[Desmodus rotundus]
gi|431914272|gb|ELK15530.1| Splicing factor, arginine/serine-rich 9 [Pteropus alecto]
Length = 221
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|296490264|tpg|DAA32377.1| TPA: splicing factor, arginine/serine-rich 9-like [Bos taurus]
Length = 221
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I+ I+LK +P +AFV FE+ RDAEDA+
Sbjct: 16 IYVGNLPNDVREKDLEDLFYKYGHISEIELKNRHGLVP-----FAFVRFEDPRDAEDAVY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLD+++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDETKFRSHEGETSYIRV 182
>gi|426247384|ref|XP_004017466.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Ovis
aries]
Length = 200
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 117/165 (70%), Gaps = 8/165 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP D+RE+++EDLFYKYG I+ I+LK +AFV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPSDVREKDLEDLFYKYGRISEIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQDLKDH
Sbjct: 76 DYGQCRLRVEFP-----RTYGGRGGWPRGGRSGPPTRRSDFRVLVSGLPPSGSWQDLKDH 130
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
MR AGDVC++ V +DG G+V+Y +DM++A++KLD+++FR+
Sbjct: 131 MREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDETKFRS 172
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 122/186 (65%), Gaps = 18/186 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP D++ER++EDLF+KYG I I+LK +AFV FE+ RDAEDA+ GR+GY
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHS---------SHSSGRGRGVSRRSEYRVLVTGLPSS 119
F +LRVE RSS + S GR +RRSE+RV+VTGLP +
Sbjct: 66 GFGDCKLRVEYP-----RSSGSKFSGPAGGGGGGGGPRGRFGPPTRRSEFRVIVTGLPPT 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRA 178
SWQDLKDHMR AGDVCF+ V RDG G+V++ +DM++A+++LD +EFR + A
Sbjct: 121 GSWQDLKDHMREAGDVCFADVQRDGE---GVVEFLRREDMEYALRRLDSTEFRSHQGETA 177
Query: 179 YVRVRE 184
Y+RV E
Sbjct: 178 YIRVME 183
>gi|158254720|dbj|BAF83333.1| unnamed protein product [Homo sapiens]
Length = 221
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 19/180 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQ
Sbjct: 71 GRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQ 125
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGD C++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 DLKDHMREAGDACYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>gi|327282648|ref|XP_003226054.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Anolis
carolinensis]
Length = 245
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 119/175 (68%), Gaps = 7/175 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP ++RE+++E+LFYKYG I I+LK +AFV FE+ RDAEDA+ GR+GY
Sbjct: 38 IYVGNLPANVREKDLEELFYKYGRIRDIELKSKRGLVPFAFVRFEDPRDAEDAVYGRNGY 97
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+ RLRVE + GR SRRSE+RVLV+GLP S SWQDLKDH
Sbjct: 98 DYGQCRLRVEFP---KPSRGRGGFGGGPRGRNGPPSRRSEFRVLVSGLPPSGSWQDLKDH 154
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
MR AGDVC++ V +DG G+V++ +DM++A++KLDD++FR + +Y+RV
Sbjct: 155 MREAGDVCYADVQKDG---MGVVEFLRKEDMEYALRKLDDTKFRSHEGETSYIRV 206
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 112/176 (63%), Gaps = 35/176 (19%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+DG+RLRVE GR LP S SWQDLKDH
Sbjct: 78 DYDGYRLRVEFPRSGR-------------------------------LPPSGSWQDLKDH 106
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
MR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 107 MREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 159
>gi|159479816|ref|XP_001697982.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158273781|gb|EDO99567.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 320
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
++VGNLP D+RE+E++++FYK+G I ID+K P RPPG+AFVEFE+ R AE+A R R+
Sbjct: 36 AIFVGNLPYDVREKELDEIFYKFGRIRMIDIKKPARPPGFAFVEFEDPRSAEEAARRRNN 95
Query: 68 YDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
Y+F G R+RVE+A GG + G R + +R+ V LP SASWQDLKD
Sbjct: 96 YEFAGMRMRVEIARGGEAAGA---QQPLRIGY-RPIRNTMGFRLYVKNLPRSASWQDLKD 151
Query: 128 HMRRAGDVCFSQVFRDG-SGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA-YVRVRE 184
+RR +++VF+D G+V++ + +DMK ++KLDD+EF N F + YVR+ E
Sbjct: 152 FVRRVCKPLYTEVFKDNRDNVVGVVEFESKEDMKATVRKLDDTEFANPFDKGHYVRLTE 210
>gi|397525476|ref|XP_003832692.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan paniscus]
Length = 274
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 120/177 (67%), Gaps = 19/177 (10%)
Query: 12 GNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIRGRD 66
GNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI GR+
Sbjct: 72 GNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIYGRN 126
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
GYD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQDLK
Sbjct: 127 GYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLK 181
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 182 DHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 235
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oreochromis
niloticus]
Length = 241
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 120/182 (65%), Gaps = 16/182 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D++ER++EDLFYKYG I I+LK IP +AFV FE+ RDA+DA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIP-----FAFVRFEDPRDADDAVY 60
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
GR+GY + +LRVE G GR +RRSE+RV+V+GLP S SWQ
Sbjct: 61 GRNGYGYGDSKLRVEYPRSKPGPMGG--GGGAPRGRFGPPTRRSEFRVIVSGLPPSGSWQ 118
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
DLKDHMR AGDVCF+ V RDG G+V++ +DM++A+++LD +EFR + AY+RV
Sbjct: 119 DLKDHMREAGDVCFADVQRDGE---GVVEFLRREDMEYALRRLDGTEFRSHQGETAYIRV 175
Query: 183 RE 184
E
Sbjct: 176 YE 177
>gi|334327169|ref|XP_003340840.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 9-like [Monodelphis domestica]
Length = 220
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 117/175 (66%), Gaps = 12/175 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YV NLP D+RE+++EDLFYKYG I I+LK +AFV FE+ RDAEDAI GR+GY
Sbjct: 18 IYVENLPADVREKDLEDLFYKYGRIRDIELKNRRGLAPFAFVRFEDPRDAEDAIYGRNGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+ RLRVEL G R SRRSE+RVLV+GLP S SWQDLKDH
Sbjct: 78 DYGQCRLRVELPRNPGGGGPRGRTGPP--------SRRSEFRVLVSGLPPSGSWQDLKDH 129
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
MR AG VC++ V +DG G+V++ +DM++A+++LDDS+FR + +Y+RV
Sbjct: 130 MREAGGVCYADVQKDG---MGVVEFLRKEDMEYALRRLDDSKFRSHEGETSYIRV 181
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 121/181 (66%), Gaps = 19/181 (10%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+ +YVGNLP D+R++EVED+F+KYG I +ID+K R P +AF+EFE+ RDAEDA+R RD
Sbjct: 8 QKVYVGNLPADVRDKEVEDIFHKYGRIKYIDVK-SGRGPAFAFIEFEDNRDAEDAVRARD 66
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVL--VTGLPSSASWQD 124
GY+FDG R+RVE G R + S R E + VT + +D
Sbjct: 67 GYEFDGRRIRVEFTRGVGPRGPVAQ------------STRKEVATVEAVTIVEDVVVVKD 114
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
LKDHMR AGDVC++ V RDG TG+V++T YDD+K+AI+KLDD++FR + AY+RVR
Sbjct: 115 LKDHMREAGDVCYADVARDG---TGVVEFTRYDDVKYAIRKLDDTKFRSHEGETAYIRVR 171
Query: 184 E 184
E
Sbjct: 172 E 172
>gi|52345494|ref|NP_001004795.1| serine/arginine-rich splicing factor 9 [Xenopus (Silurana)
tropicalis]
gi|49257722|gb|AAH74531.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
gi|89272901|emb|CAJ83204.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
Length = 225
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 120/181 (66%), Gaps = 17/181 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK------IPPRPPGYAFVEFEEARDAEDAI 62
+YVGNLP DIRE+E+EDLF +YG I I+LK P +AF+ F++ RDAEDA+
Sbjct: 18 IYVGNLPADIREKELEDLFDRYGRIRTIELKNRGGSSAAP----FAFISFQDPRDAEDAV 73
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
R+GY+F RLRVE R S S GR SRRSEYRV+V+GLP S SW
Sbjct: 74 FARNGYEFGSCRLRVEFP---RSFRGSGGGYGGSRGRNGPPSRRSEYRVIVSGLPPSGSW 130
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVR 181
QDLKDHMR AGDVC++ V +DG GIV++ +DM++A++KLDD++FR + +Y+R
Sbjct: 131 QDLKDHMREAGDVCYADVHKDG---MGIVEFIRKEDMEYALRKLDDTKFRSHEGETSYIR 187
Query: 182 V 182
V
Sbjct: 188 V 188
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 127/193 (65%), Gaps = 18/193 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP ++ R++EDLF KYGPI ID+ P +AF+EFE+ RDA DA+ G+DG
Sbjct: 14 VYVGNLPQFVKNRDIEDLFDKYGPIKAIDIH-NRFDPAFAFLEFEDPRDASDAVYGKDGE 72
Query: 69 DFDGHRLRVEL---AHGGRGRSSSDRHSSHSSGRGRGVS-----RRSEYRVLVTGLPSSA 120
F+G R+RV+ + GR R+ S +++ G RG RRSE RVLV+GLP +
Sbjct: 73 RFEGQRIRVQFPRNSAAGRERTESGSNNNGGGGYVRGRGRGPPIRRSENRVLVSGLPPTG 132
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAY 179
SWQDLKDHMR AG+V ++ V++DG T + ++ NY+DMK A+K LDDS+F+ + +
Sbjct: 133 SWQDLKDHMREAGEVLYADVYKDG---TAVCEFANYEDMKWAVKYLDDSKFKSHENETTF 189
Query: 180 VRVREYDHRRDGS 192
VRV +RDG+
Sbjct: 190 VRV-----KRDGN 197
>gi|340371197|ref|XP_003384132.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Amphimedon
queenslandica]
Length = 242
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 124/184 (67%), Gaps = 12/184 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLPGDIR+R++ED+FYKYG + +DL P +AF+EFE+ RDA+DAIRGRDGY
Sbjct: 11 VYVGNLPGDIRKRDLEDIFYKYGKLVDVDLHDRRETP-FAFIEFEDPRDADDAIRGRDGY 69
Query: 69 DFDGHRLRVELA-------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSAS 121
FDG++LRVEL G G G GRG R+S +++++TGLP + S
Sbjct: 70 MFDGYKLRVELPRSSPRYVGGRGGGGRGYYGGGRRDGYGRGGGRQSGHKLMITGLPPTGS 129
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYV 180
WQD+KDH R+AGDV ++ V RDG TG+V++ Y+ K A++ LDDS+FR + AY+
Sbjct: 130 WQDIKDHFRQAGDVIYANVERDG---TGVVEFARYEHAKRAVRDLDDSKFRSHEGESAYI 186
Query: 181 RVRE 184
RV E
Sbjct: 187 RVSE 190
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 112/176 (63%), Gaps = 37/176 (21%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+DG+RLRVE RR LP S SWQDLKDH
Sbjct: 78 DYDGYRLRVEF------------------------PRR---------LPPSGSWQDLKDH 104
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
MR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 105 MREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 157
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 119/184 (64%), Gaps = 18/184 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK------IPPRPPGYAFVEFEEARDAEDAI 62
+YVGNLP DIRE+E+EDLF +YG I ++LK P +AF+ +++ RDAEDA+
Sbjct: 18 IYVGNLPSDIREKELEDLFDRYGRIRTVELKNRGGSSAP-----FAFISYQDPRDAEDAV 72
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSS 119
GR+GYDF RLRVE RG G SRRSEYRV+V+GLP S
Sbjct: 73 FGRNGYDFGSCRLRVEFPRSFRGSGGGGGGGGGYGGSRGRNGPPSRRSEYRVIVSGLPPS 132
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRA 178
SWQDLKDHMR AGDVC++ V +DG GIV++ +DM++A++KLDD++FR + +
Sbjct: 133 GSWQDLKDHMREAGDVCYADVHKDG---MGIVEFIRKEDMEYALRKLDDTKFRSHEGETS 189
Query: 179 YVRV 182
Y+RV
Sbjct: 190 YIRV 193
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 113/176 (64%), Gaps = 19/176 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D++ER++EDLF+KYG I I+LK IP +AFV FE+ RDAEDA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIP-----FAFVRFEDPRDAEDAVY 60
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV------SRRSEYRVLVTGLP 117
GR+GY +LRVE + S G +RRSE+RV+VTGLP
Sbjct: 61 GRNGYGLGDSKLRVEYPRSSGAKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLP 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
S SWQDLKDHMR AGDVCF+ V RDG G+V++ +DM++A+++LD +EFR+
Sbjct: 121 PSGSWQDLKDHMREAGDVCFADVQRDGE---GVVEFVRREDMEYALRRLDRTEFRS 173
>gi|297693630|ref|XP_002824116.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Pongo
abelii]
Length = 221
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 118/176 (67%), Gaps = 9/176 (5%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
+YVGNLP D+RE+++EDLFYKYG I ++LK +AFV E+ RDAEDAI GR+G
Sbjct: 15 CIYVGNLPTDVREKDLEDLFYKYGRIREMELKNRHGLVPFAFVRLEDPRDAEDAIYGRNG 74
Query: 68 YDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
YD+ RLRVE R+ R GR +RRS++RVLV+GLP S SWQDLKD
Sbjct: 75 YDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPPSGSWQDLKD 129
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
HMR AGDVC++ V +DG G+V+Y +DM++A++KL D++F + +Y+RV
Sbjct: 130 HMREAGDVCYADVRKDG---VGMVEYLRKEDMEYALRKLHDTKFHSHEGETSYIRV 182
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 81/95 (85%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSSR SRT+YVGNLP DI+E E+EDLFYKYG I I+LKIPPRPP Y FVEFE RDAED
Sbjct: 1 MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSH 95
AIR RDGY+FDG RLRVELAHGGRG SSSDR SS+
Sbjct: 61 AIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSY 95
>gi|326433655|gb|EGD79225.1| splicing factor [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 115/166 (69%), Gaps = 18/166 (10%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R +YVGNLP DIRERE++DLFYK+G I I +K P YAFV FE++RDAEDA+R RD
Sbjct: 4 RRIYVGNLPYDIREREIDDLFYKFGRIEEITIKGP-----YAFVSFEDSRDAEDAVRRRD 58
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
GY+F G RLRVE A+GGR +R + +G + SE+R+ V+ LP +ASWQD+K
Sbjct: 59 GYEFGGGRLRVEFANGGR----RERGARAFNG------QHSEFRLRVSNLPRTASWQDVK 108
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
D R AG+V F++VF DG TG+V++ DDM+ A++ L++ + R
Sbjct: 109 DFCREAGEVLFAEVFHDG---TGLVEFRREDDMEWALRNLNERKLR 151
>gi|384950064|gb|AFI38637.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 118/175 (67%), Gaps = 14/175 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP D+RE+++EDLFYKYG I I+LK +AFV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKTRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+ RLRVE R+ R GR +RRS++RVLV+G SWQDLKDH
Sbjct: 76 DYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSG-----SWQDLKDH 125
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
MR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 MREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 177
>gi|383422447|gb|AFH34437.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 118/175 (67%), Gaps = 14/175 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP D+RE+++EDLFYKYG I I+LK +AFV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+ RLRVE R+ R GR +RRS++RVLV+G SWQDLKDH
Sbjct: 76 DYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSG-----SWQDLKDH 125
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
MR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 126 MREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 177
>gi|307173759|gb|EFN64546.1| Splicing factor, arginine/serine-rich 1 [Camponotus floridanus]
Length = 262
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 111/168 (66%), Gaps = 17/168 (10%)
Query: 33 IAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGG--------- 83
I+ + K+ P+ ++RDAEDA+ RDGYD+DG+RLRVE GG
Sbjct: 48 ISGLVAKLEPKSKAPIISLQNDSRDAEDAVHARDGYDYDGYRLRVEFPRGGGPSNNFRGG 107
Query: 84 RGRSSSDR--HSSHSSGRGRGV-SRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 140
RG S R S+ RGRG +RRS+YRVLV+GLP + SWQDLKDHMR AGDVCF+ V
Sbjct: 108 RGAGDSGRGGRGEMSNSRGRGPPARRSQYRVLVSGLPPTGSWQDLKDHMREAGDVCFADV 167
Query: 141 FRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR-AYVRVREYDH 187
++DG TG+V++ +DDMK+A+KKLDDS FR+ AY+RVRE DH
Sbjct: 168 YKDG---TGVVEFLRHDDMKYAVKKLDDSRFRSHEGEVAYIRVRE-DH 211
>gi|221053983|ref|XP_002261739.1| pre-mRNA splicing factor [Plasmodium knowlesi strain H]
gi|193808199|emb|CAQ38902.1| pre-mRNA splicing factor, putative [Plasmodium knowlesi strain H]
Length = 495
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 117/185 (63%), Gaps = 14/185 (7%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPG----YAFVEFEEARDA 58
SR S +YVGNLPG++ E EV DLF KYG I +ID+K PR PG +AFV + ++RDA
Sbjct: 9 SRISSCIYVGNLPGNVVEDEVYDLFSKYGRIKYIDVK-KPRAPGVPYSFAFVHYFDSRDA 67
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
E AI RDGY +DG RLRVE + G RS ++ + G G V R+E+R++++ LP
Sbjct: 68 EYAIDRRDGYKYDGVRLRVEYS--GENRSYG-KYRNKEEGTGPPV--RTEHRIIISNLPE 122
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
S WQ LKD MR+ GDV ++ V R G+V++ + DDM +AI+K D SEF+
Sbjct: 123 SCKWQHLKDVMRQCGDVGYANVER----GKGVVEFISRDDMLYAIEKFDGSEFKVYDDVT 178
Query: 179 YVRVR 183
++VR
Sbjct: 179 NIKVR 183
>gi|124802534|ref|XP_001347501.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23495082|gb|AAN35414.1|AE014832_36 pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 538
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 10/182 (5%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLK-IPPRPPGYAFVEFEEARDAEDA 61
S++S +YVGNLPG++ E EV DLF KYG I +ID+K YAFV + + +DA+ A
Sbjct: 8 SKSSSCIYVGNLPGNVIEEEVYDLFGKYGRIKYIDIKPSRSSSSSYAFVHYYDLKDADYA 67
Query: 62 IRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSAS 121
I RDGY FDG RLRVE H G RS ++ G G + R+E RV+VT LP +
Sbjct: 68 IERRDGYKFDGFRLRVE--HSGENRSFG-KYRKKDDGVGPPI--RTENRVIVTNLPDNCR 122
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVR 181
WQ LKD MR+ GDV ++ + R GIV++ +YDDM +AI+K D +EF+ ++
Sbjct: 123 WQHLKDIMRQCGDVGYANIER----GKGIVEFVSYDDMLYAIEKFDGAEFKVYDDVTNIK 178
Query: 182 VR 183
VR
Sbjct: 179 VR 180
>gi|119614893|gb|EAW94487.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_b [Homo sapiens]
Length = 230
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 109/179 (60%), Gaps = 25/179 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR + P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKNRRGG------------------PPFAFVEFEDPRDAEDAVYGRDGY 59
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 60 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 119
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
KDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 120 KDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 175
>gi|237841065|ref|XP_002369830.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211967494|gb|EEB02690.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 512
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 110/183 (60%), Gaps = 13/183 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIP-PRPPGYAFVEFEEARDAEDAIRGRDG 67
++V NLP D+ E E+EDLFYK+G I I+++ AFV+F E + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YDFDGHRLRVE-----LAHGGR---GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
HR+R+E L G R S +G G RRSE+RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDV ++ + G G+V+Y+N DDM +A++KL S FRN F A
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAK 197
Query: 180 VRV 182
+RV
Sbjct: 198 IRV 200
>gi|221504321|gb|EEE29996.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 513
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 110/183 (60%), Gaps = 13/183 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIP-PRPPGYAFVEFEEARDAEDAIRGRDG 67
++V NLP D+ E E+EDLFYK+G I I+++ AFV+F E + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YDFDGHRLRVE-----LAHGGR---GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
HR+R+E L G R S +G G RRSE+RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDV ++ + G G+V+Y+N DDM +A++KL S FRN F A
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAK 197
Query: 180 VRV 182
+RV
Sbjct: 198 IRV 200
>gi|221483656|gb|EEE21968.1| hypothetical protein TGGT1_121760 [Toxoplasma gondii GT1]
Length = 513
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 110/183 (60%), Gaps = 13/183 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIP-PRPPGYAFVEFEEARDAEDAIRGRDG 67
++V NLP D+ E E+EDLFYK+G I I+++ AFV+F E + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YDFDGHRLRVE-----LAHGGR---GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
HR+R+E L G R S +G G RRSE+RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDV ++ + G G+V+Y+N DDM +A++KL S FRN F A
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAK 197
Query: 180 VRV 182
+RV
Sbjct: 198 IRV 200
>gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus]
Length = 190
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 109/166 (65%), Gaps = 23/166 (13%)
Query: 25 DLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVEL 79
DLFYKYG I I+LK +P +AFV FE+ RDAEDAI GR+GYD+ RLRVE
Sbjct: 1 DLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEF 55
Query: 80 --AHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCF 137
+GGRG R +RRS++RVLV+GLP S SWQDLKDHMR AGDVC+
Sbjct: 56 PRTYGGRG-------GWPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCY 108
Query: 138 SQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRV 182
+ V +DG G+V+Y +DM++A++KLDD++FR + +Y+RV
Sbjct: 109 ADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 151
>gi|428673079|gb|EKX73992.1| pre-mRNA splicing factor, putative [Babesia equi]
Length = 325
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 125/210 (59%), Gaps = 15/210 (7%)
Query: 2 SSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLK--IPPRPPGYAFVEFEEARDAE 59
++R+ ++VGNLP + +R++ ++F KYG I ID+K YAF+EFE R AE
Sbjct: 8 ANRSPSCVFVGNLPEKVDDRDIHEIFDKYGEIRDIDIKHGKTSNYTSYAFIEFESVRSAE 67
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV----SRRSEYRVLVTG 115
DA+ RDGY+FD +RLRVE A G S RH SS RG R++YR++++
Sbjct: 68 DAVECRDGYEFDRYRLRVEFA----GEKKSRRHP-RSSYEDRGSRYPPPTRTDYRLVISN 122
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAF 175
LP WQ LKDHMR+AG V + + G VD+ + DMK+A++KLD +E +
Sbjct: 123 LPHGCRWQHLKDHMRKAGPVGYVNI----QHGRGYVDFMHKSDMKYALRKLDGTELSTSE 178
Query: 176 SRAYVRVREYDHRRDGSQSPSRGRSYSRGR 205
A +R+++ D+RR S+ R RS+SRGR
Sbjct: 179 DSARIRIKKDDYRRSRSRDAYRRRSHSRGR 208
>gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii]
Length = 345
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 110/183 (60%), Gaps = 13/183 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIP-PRPPGYAFVEFEEARDAEDAIRGRDG 67
++V NLP D+ E E+EDLFYK+G I I+++ AFV+F E + A+DAI GRDG
Sbjct: 22 IFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTNDSTIAFVQFAEYKAADDAIEGRDG 81
Query: 68 YDFDGHRLRVE-----LAHGGR---GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
HR+R+E L G R S +G G RRSE+RV V GLP +
Sbjct: 82 AHLGFHRIRIERSRQRLRRPGEFRRDRGGYGGRESGGNGPAYGPPRRSEFRVRVYGLPPT 141
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDV ++ + G G+V+Y+N DDM +A++KL S FRN F A
Sbjct: 142 ASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDYALRKLHGSVFRNIFHTAK 197
Query: 180 VRV 182
+RV
Sbjct: 198 IRV 200
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 102/166 (61%), Gaps = 6/166 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP + R+VE+ F KYG I D+K +AF+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVSSRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 DFDGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
DF+G++LRVE+ R GR ++ R SRR Y V VTGLP S SWQDLK
Sbjct: 70 DFEGNKLRVEVPFNARENGRYNA-RGGGRGMMHRGPKSRRGRYVVEVTGLPISGSWQDLK 128
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
DH+R AG+ + VF+DG TG V + N DDM AI K + S FR
Sbjct: 129 DHLREAGECGHADVFKDG---TGEVSFFNKDDMLEAIDKFNGSIFR 171
>gi|156082103|ref|XP_001608544.1| pre-mRNA splicing factor [Plasmodium vivax Sal-1]
gi|148801115|gb|EDL42520.1| pre-mRNA splicing factor, putative [Plasmodium vivax]
Length = 544
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 116/185 (62%), Gaps = 14/185 (7%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPG----YAFVEFEEARDA 58
+R S +YVGNLPG++ E EV DLF K+G I +ID+K PR PG +AFV + ++RDA
Sbjct: 9 NRISSCIYVGNLPGNVVEDEVYDLFAKFGRIKYIDVK-KPRAPGVPYSFAFVHYFDSRDA 67
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
E AI RDGY +DG RLRVE + G +S ++ G G V R+E+R++++ LP
Sbjct: 68 EYAIDRRDGYKYDGVRLRVEYS--GENKSYG-KYRKKEEGAGPPV--RTEHRIIISNLPE 122
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
S WQ LKD MR+ GDV ++ + R G+V++ + DDM +AI+K D SEF+
Sbjct: 123 SCKWQHLKDVMRQCGDVGYANIER----GRGVVEFISRDDMLYAIEKFDGSEFKVYDDVT 178
Query: 179 YVRVR 183
++VR
Sbjct: 179 NIKVR 183
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 20/165 (12%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
SR +YVGNLP DIRERE+++LFYKYG I I +K P YAFV FE+ RDAEDA+ G
Sbjct: 4 GSRRVYVGNLPRDIRERELDELFYKYGRILDIHIKGP-----YAFVTFEDERDAEDAVHG 58
Query: 65 RDGYDFDGHRLRVELAHGG-RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
RDG +F G RLRVEL++ G RG + D S + SE+RVL+ GLP +ASWQ
Sbjct: 59 RDGINFAGGRLRVELSNPGRRGANPRDNFS----------GKHSEFRVLIKGLPRTASWQ 108
Query: 124 DLKDHMRRA-GDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
D+KD + DV F+ V RDG G+ ++ N +DM A+ K++
Sbjct: 109 DVKDFFKDERLDVVFTDVNRDG---VGMAEFGNQEDMNFALDKMN 150
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP + R+VE+ F K+G I D+K +AF+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
DF G++LRVE+ R + GRG SRR Y V V+GLP S SWQDLKDH
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRG-SKSRRGRYVVEVSGLPLSGSWQDLKDH 128
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
+R AG+ + VF++G TG V + + +DM AI+K + S FR
Sbjct: 129 LREAGECGHADVFKNG---TGEVSFFHKEDMLEAIEKFNGSTFR 169
>gi|402581303|gb|EJW75251.1| alternative splicing regulator, partial [Wuchereria bancrofti]
Length = 217
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 132/226 (58%), Gaps = 30/226 (13%)
Query: 49 FVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRH---SSHSSGRGRGVSR 105
F + E+ RDA DA+ GRDGYDFDG R+RVEL G R R S R R
Sbjct: 1 FGKLEDCRDARDAVHGRDGYDFDGCRIRVELTRGVGPRGPGGRPLYGPDPRSPRRGPPPR 60
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
RS YRV+V+GLP + SWQDLKDHMR AG++C++ VFRDG TG+V+YTNY+DMK+A++K
Sbjct: 61 RSGYRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRDG---TGVVEYTNYEDMKYALRK 117
Query: 166 LDDSEFRNAFSRA-YVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRS 224
LDD++F++ Y+RV+E + SP+R RS S ++RS +
Sbjct: 118 LDDTKFKSHEGEVTYIRVKEAN-----INSPNRSRSRSHTPRKTRSSPKYSPTRSPSKSR 172
Query: 225 ----------------QSKSPKAKSSRRSPDRSRSRSASRSRSGSK 254
+S SP S+ RSP S++RS +RSRSGS+
Sbjct: 173 SRSSRSRSHSRTSFVRRSTSPVHSSNSRSP--SKTRSKTRSRSGSR 216
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi strain
B]
Length = 316
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 113/196 (57%), Gaps = 8/196 (4%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
MS R S + +YVGNLP + R+VE+ F KYG I D+K +AF+EFE+ARDA
Sbjct: 1 MSMRESISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAA 60
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
DAI+ +DG DF G++LRVE+ R + SRR Y V V+GLP S
Sbjct: 61 DAIKEKDGCDFGGNKLRVEVPFNARDNGKYNSRGGRGMMGRGMKSRRGRYVVEVSGLPLS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRA 178
SWQDLKDH+R AG+ + VF++G G V + + +DM AI+K + S FR + ++
Sbjct: 121 GSWQDLKDHLREAGECGHADVFKNGLGE---VSFFHKEDMLEAIEKFNGSTFRSHEGEKS 177
Query: 179 YVRVREYD---HRRDG 191
+ +RE HR DG
Sbjct: 178 KITIREKKVSWHREDG 193
>gi|399216785|emb|CCF73472.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 108/177 (61%), Gaps = 18/177 (10%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPR--PPGYAFVEFEEARDAEDAIRGR 65
+YV NLP DI E E++D FYK+G I I +K R YA++EF+ + +DAI+ R
Sbjct: 7 CIYVANLPPDITEHELDDKFYKFGRIRQITIKQSRRRDDECYAYIEFDSSSSVDDAIKYR 66
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
DGY F +R+ V++ G+SS RG R++YRV+V LPSSASWQDL
Sbjct: 67 DGYKFGRYRIFVDILREKGGKSS------------RGPPMRTDYRVIVDNLPSSASWQDL 114
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
KDHMR+AG V +S V R G V+Y DM+ A++ LD SEF+N +S++ +RV
Sbjct: 115 KDHMRKAGPVGYSSVNR----GKGYVEYETKKDMEWALENLDKSEFKNIYSKSIIRV 167
>gi|399218146|emb|CCF75033.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 119/193 (61%), Gaps = 20/193 (10%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKI--PPRPPGYAFVEFEEARDAED 60
+ A ++VGNLP DI RE+E++F K+G I ID+K YAF+EF RDAED
Sbjct: 10 NHAPACIFVGNLPEDITVREIENIFGKFGEIRDIDIKKGKTSNYTAYAFIEFYHMRDAED 69
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSD-----RHSSHSSGRGRGVSRRSEYRVLVTG 115
A+ RDGY+FD +RLRVE + GR RS + R++ +S+ R+E+R++++
Sbjct: 70 AVESRDGYNFDKYRLRVEFS--GRKRSGNQGDKLRRYNDYSN-------TRTEHRLVISN 120
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAF 175
+ SS WQD+KDHM+RAG V + +DG G V+Y N DMK+A++K D SE ++A
Sbjct: 121 ISSSCRWQDIKDHMKRAGPVGHVCI-KDG---RGYVEYINKSDMKYALEKYDGSELQSAG 176
Query: 176 SRAYVRVREYDHR 188
++VR DHR
Sbjct: 177 RSYRIKVRMDDHR 189
>gi|412989158|emb|CCO15749.1| predicted protein [Bathycoccus prasinos]
Length = 347
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 108/202 (53%), Gaps = 27/202 (13%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
T++VGNLP DIRERE++DLFYKYG I HI + PP +AF+EFE+ RDAEDA RDG
Sbjct: 16 TIFVGNLPLDIRERELDDLFYKYGRIVHIKMPRCNHPPAFAFIEFEDKRDAEDAQYYRDG 75
Query: 68 YDFDGHRLRVEL-------------------------AHGGRGRSSSDRHSSHSSGRGRG 102
Y+FDG+RLRVE+ G G S+ +R
Sbjct: 76 YEFDGNRLRVEISKGSSGGGGFGGTRDDRGGGERGGRGGGRFGGSADERGGGRGGRGSFE 135
Query: 103 VSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSG--TTGIVDYTNYDDMK 160
RR+E+ V+V LP ASWQDLKD RR+G V ++ F D + G VD+ D +
Sbjct: 136 RPRRTEFCVVVRNLPPRASWQDLKDFFRRSGKVTYANAFIDSNTGEQIGEVDFEYLTDAE 195
Query: 161 HAIKKLDDSEFRNAFSRAYVRV 182
+A D EF N F + ++
Sbjct: 196 NACDDCDGIEFENRFGVSKIQC 217
>gi|401399758|ref|XP_003880627.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
gi|325115038|emb|CBZ50594.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
Length = 448
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 110/183 (60%), Gaps = 13/183 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIP-PRPPGYAFVEFEEARDAEDAIRGRDG 67
++V NLP D+ E E+EDLFYK+G I I+L+ AFV+F + + A++AI GRDG
Sbjct: 23 IFVANLPLDVTENELEDLFYKFGRIEDIELRRDRTNDSTIAFVQFADYKAADEAIEGRDG 82
Query: 68 YDFDGHRLRVELAH------GGRGRSSSDRHSSHSSGR--GRGVSRRSEYRVLVTGLPSS 119
HR+R+E + G GRS + G G RRSE+RV V GLP +
Sbjct: 83 TRLGFHRIRIERSRQRLRRPGEFGRSDRSGYGREGGGSGPAYGPPRRSEFRVRVYGLPPT 142
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
ASWQDLKDHMRRAGDV ++ + G G+V+Y+N DM +A++KL S FRN F A
Sbjct: 143 ASWQDLKDHMRRAGDVGYANI----DGGVGVVEYSNGSDMDYALRKLHGSVFRNIFHTAK 198
Query: 180 VRV 182
+RV
Sbjct: 199 IRV 201
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
MS R S + +YVGNLP + R+VE+ F KYG I D+K +AF+EFE+ARDA
Sbjct: 1 MSMRESISRIYVGNLPSHVTPRDVENEFRKYGTILKCDVKKTVSGAAFAFIEFEDARDAA 60
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
DAI+ +DG DF G++LRVE+ R SRR Y V V+GLP S
Sbjct: 61 DAIKEKDGCDFGGNKLRVEVPFNARDNGKYSSRGGRGMMGRGMKSRRGRYVVEVSGLPLS 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRA 178
SWQDLKDH+R AG+ + VF++G G V + + +DM AI+K + S FR + ++
Sbjct: 121 GSWQDLKDHLREAGECGHADVFKNGLGE---VSFFHKEDMLEAIEKFNGSTFRSHEGEKS 177
Query: 179 YVRVREYD---HRRDG 191
+ +R+ HR DG
Sbjct: 178 KITIRQKKTSWHREDG 193
>gi|428162693|gb|EKX31812.1| hypothetical protein GUITHDRAFT_82780, partial [Guillardia theta
CCMP2712]
Length = 208
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 106/170 (62%), Gaps = 25/170 (14%)
Query: 11 VGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR-DGYD 69
VGNLP DIR R+VEDLFYKYG ++P PP +AFV FE DAEDA+RGR DG
Sbjct: 5 VGNLPLDIRTRDVEDLFYKYG-------RLPTIPPAFAFVSFEYPEDAEDAVRGRADGVM 57
Query: 70 FDGHRLRVELA---------HGGR--GRSSSDRHSSHSSGRG--RGVSRRSEYRVLVTGL 116
F+G RLRVE++ GG G+ +S + R R + RRS++R++++GL
Sbjct: 58 FEGQRLRVEMSRSSQDGYVEWGGSWVGKEEDGGRASQAGNRAPPRDL-RRSDHRIIISGL 116
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
P SASWQDLKD R AG+V FS V R G GIV++ N D ++AI K+
Sbjct: 117 PPSASWQDLKDFFRSAGEVIFSDVDRQGG---GIVEFANKSDQEYAISKV 163
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 104/165 (63%), Gaps = 9/165 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+GNLP D +RE+E+ F K+G I + DLK +AF+EF ++RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCDLKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+F G +LRVEL R R R SS R G +RR +Y + VTGLP + SWQDLKDH
Sbjct: 69 EFHGKKLRVELPF--RYRDEPRRPSS----RRYGTTRRGKYVLEVTGLPPTGSWQDLKDH 122
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
MR AG+ + VFR G G + + + DM +AI++ D S FR+
Sbjct: 123 MRDAGECGHADVFR---GGVGEITFFSRSDMDYAIERFDGSTFRS 164
>gi|83273559|ref|XP_729451.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii]
Length = 516
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 21/190 (11%)
Query: 2 SSRASRT--LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIP--PRPPGYAFVEFEEARD 57
SSR +RT +YVGNLPG++ E EV DLF K+G I +ID+K+ YAFV + + +D
Sbjct: 5 SSRYNRTSCIYVGNLPGNVLEDEVYDLFGKFGRIKYIDIKLTRGSSSTAYAFVHYYDIKD 64
Query: 58 AEDAIRGRDGYDFDGHRLRVELAHG----GRGRSSSDRHSSHSSGRGRGVSRRSEYRVLV 113
AE AI RDGY FDG RLRVE + G+ R D G G R+E+R++V
Sbjct: 65 AEYAIERRDGYKFDGERLRVEFSGENKSFGKYRRKED---------GIGPPLRTEHRIIV 115
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
+ LP + WQ LKD MR+ GDV ++ + GIV++ + D M +AI+K D +EF+
Sbjct: 116 SNLPDNCKWQHLKDIMRQCGDVGYANI----EHGKGIVEFVDRDGMLYAIEKFDRAEFKV 171
Query: 174 AFSRAYVRVR 183
++VR
Sbjct: 172 HDQVTNIKVR 181
>gi|324516767|gb|ADY46629.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 210
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 97/140 (69%), Gaps = 7/140 (5%)
Query: 38 LKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRH----S 93
+I R +F+EF++ RDA DA+RGRDGY FDG RLRVEL G R R
Sbjct: 5 CQIHTRRTILSFIEFDDPRDARDAVRGRDGYSFDGCRLRVELTRGVGPRGPGGRPLYAAE 64
Query: 94 SHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDY 153
S R RRS YRV+++GLP+S SWQDLKDHMR AGD+C+++V +DG TG+V+Y
Sbjct: 65 QMSPRRRAPPPRRSGYRVVISGLPASGSWQDLKDHMREAGDICYAEVSKDG---TGVVEY 121
Query: 154 TNYDDMKHAIKKLDDSEFRN 173
NYDDMK+A++KLDD++F++
Sbjct: 122 INYDDMKYAVRKLDDTKFKS 141
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 103/177 (58%), Gaps = 15/177 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP + +RE+E+ F K+G I D+K +AFVEFE+ RDA+DAI+ +DGY
Sbjct: 10 VYVGNLPSECDQREIEEEFEKFGKIKRCDVKRGANGSSFAFVEFEDPRDAKDAIKEKDGY 69
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+F G RLRVE+ RG S R R RR Y V V GLP S SWQDLKDH
Sbjct: 70 EFKGSRLRVEVPFSDRGYS-----------RRRPTPRRGHYTVEVLGLPPSGSWQDLKDH 118
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVRE 184
MR AG+ + VFR G G V + + DM AI+ D S FR + +A + VRE
Sbjct: 119 MRDAGECGHADVFR---GGVGEVSFFSRRDMDAAIEMFDGSTFRSHEGEKAKITVRE 172
>gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor [Plasmodium chabaudi chabaudi]
gi|56521563|emb|CAH75989.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 373
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 15/189 (7%)
Query: 1 MSSRASR----TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIP--PRPPGYAFVEFEE 54
M R+SR +YVGNLPG++ E EV DLF KYG I +ID+K+ YAFV + +
Sbjct: 1 MGYRSSRYRTSCIYVGNLPGNVLEDEVYDLFGKYGRIKYIDIKLTRGSSSTAYAFVHYYD 60
Query: 55 ARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVT 114
+DAE AI RDGY FDG RLRVE + + R G G R+E+R++V+
Sbjct: 61 IKDAEYAIERRDGYKFDGERLRVEFSGENKSFGKYRRKED-----GIGPPLRTEHRIIVS 115
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
LP + WQ LKD MR+ GDV ++ + GIV++ + D M +AI+K D +EF+
Sbjct: 116 NLPDNCKWQHLKDIMRQCGDVGYANI----EHGKGIVEFVDRDGMLYAIEKFDRAEFKVH 171
Query: 175 FSRAYVRVR 183
++VR
Sbjct: 172 DQVTNIKVR 180
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 103/168 (61%), Gaps = 24/168 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+
Sbjct: 78 DYDGYRLRVEFPRSGRGAGRGGGGGGGGGAPRGRYGPPSRRSENRVVVS----------- 126
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GDVC++ V+RDG TG+V++ +DM +A++KLD+++FR+
Sbjct: 127 -------GDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRS 164
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 108/185 (58%), Gaps = 15/185 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M S LYVGNLP D +REVE+ F K+G I + +LK +AFVEF + RDA D
Sbjct: 1 MESDKVVRLYVGNLPDDCTQREVEEEFEKFGKIVYCELKRTVSGLPFAFVEFSDYRDARD 60
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI+ +DG +F+G RLRVE+ SS R S S R+ +Y V VTGLP +
Sbjct: 61 AIKNKDGAEFNGKRLRVEVPF------SSKRQSRRSDP-----PRKGKYLVEVTGLPPTG 109
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAY 179
SWQDLKDH+R AG+ + VFR G G V + + DM++AI K D S F+ + +A
Sbjct: 110 SWQDLKDHLRAAGECGHANVFRGGVGE---VSFFSRGDMEYAIDKFDGSTFKSHQGEKAR 166
Query: 180 VRVRE 184
+ VRE
Sbjct: 167 ITVRE 171
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 111/195 (56%), Gaps = 8/195 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS SR +YVGNLP + R+VE+ F KYG I D+K +AF+EFE+ARDA D
Sbjct: 3 MSESISR-IYVGNLPSHVSPRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAAD 61
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI+ +DG D+ G++LRVE+ R SRR Y V V+GLP S
Sbjct: 62 AIKEKDGSDYGGNKLRVEVPFNARDNGKYGPRGGRGMMGRGMRSRRGRYVVEVSGLPLSG 121
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAY 179
SWQDLKDH+R AG+ + VF++G G V + + +DM AI+K + S FR + ++
Sbjct: 122 SWQDLKDHLREAGECGHADVFKNGIGE---VSFFHKEDMLEAIEKFNGSTFRSHEGEKSK 178
Query: 180 VRVREYD---HRRDG 191
+ +RE HR DG
Sbjct: 179 ITIREKKISWHREDG 193
>gi|449529130|ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 158
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 69/75 (92%)
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+V GLPSSASWQDLKDHMR+AGDVCF++V RD GT GIVDYTNYDDMK+AI+KLDD+EF
Sbjct: 1 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEF 60
Query: 172 RNAFSRAYVRVREYD 186
RN ++RAY+RV++YD
Sbjct: 61 RNPWARAYIRVKKYD 75
>gi|84998374|ref|XP_953908.1| splicing factor (SR protein) [Theileria annulata]
gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata]
Length = 341
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 108/191 (56%), Gaps = 16/191 (8%)
Query: 2 SSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLK--IPPRPPGYAFVEFEEARDAE 59
++R+ ++VGNLP + ER++ DLF K+G I +D+K YAF+EF R AE
Sbjct: 8 ANRSPSCVFVGNLPDRVDERDIHDLFDKFGEIKDVDIKHGKTSNYTSYAFIEFASVRSAE 67
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR------SEYRVLV 113
DA+ RDGY++D +RLRVE A G R+ S+ R R S R ++YR+++
Sbjct: 68 DAVDSRDGYEYDRYRLRVEFA----GEKKPRRYPSYDRPRDRDRSNRYPPPTRTDYRLVI 123
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
+ LP WQ LKDHMR+AG V + + G VDY + DMK+AI+KLD SE
Sbjct: 124 SNLPHGCRWQHLKDHMRKAGPVGYVNIVH----GKGFVDYMHKSDMKYAIRKLDGSELTT 179
Query: 174 AFSRAYVRVRE 184
+RV++
Sbjct: 180 PDDSCRIRVKK 190
>gi|198436398|ref|XP_002124933.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1,
partial [Ciona intestinalis]
Length = 166
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 96/131 (73%), Gaps = 12/131 (9%)
Query: 57 DAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSD---RHSSHSSGRGRGVSRRSEYRVLV 113
DA+DA+R R+GY+FDG++L+VE R RSSS R S++ GR S+R+EYRV+V
Sbjct: 1 DADDAVRARNGYNFDGYKLKVE-----RPRSSSGFQGRPSNYIRGRPGPPSKRTEYRVIV 55
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR- 172
GLP S SWQDLKDHMR AGDVC++ V+RDGS G+V++ N +DMK A+K +DD++FR
Sbjct: 56 EGLPGSGSWQDLKDHMREAGDVCYADVYRDGS---GVVEFVNKEDMKFALKHMDDTKFRS 112
Query: 173 NAFSRAYVRVR 183
+ +Y+RV+
Sbjct: 113 HEGETSYIRVK 123
>gi|449480417|ref|XP_002196866.2| PREDICTED: serine/arginine-rich splicing factor 1 [Taeniopygia
guttata]
Length = 210
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 91/134 (67%), Gaps = 7/134 (5%)
Query: 54 EARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYR 110
+ RDAEDA+ GRDGYD+DG+RLRVE GRG SRRSEYR
Sbjct: 20 QPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSEYR 79
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
V+V+GLP S SWQDLKDHMR AGDVC++ VFRDG TG+V++ +DM +A++KLD+++
Sbjct: 80 VIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTK 136
Query: 171 FR-NAFSRAYVRVR 183
FR + AY+RV+
Sbjct: 137 FRSHEGETAYIRVK 150
>gi|71033489|ref|XP_766386.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353343|gb|EAN34103.1| hypothetical protein TP01_0865 [Theileria parva]
Length = 343
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 16/191 (8%)
Query: 2 SSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLK--IPPRPPGYAFVEFEEARDAE 59
++R+ ++VGNLP + ER+++DLF K+G I ID+K YAF+EF R AE
Sbjct: 8 ANRSPSCVFVGNLPDRVDERDIQDLFDKFGEIKDIDIKHGKTSNYTSYAFIEFASVRSAE 67
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR------SEYRVLV 113
DA+ RDGY++D +RLRVE A R R R+ S+ R R S R ++YR+++
Sbjct: 68 DAVDSRDGYEYDRYRLRVEFAGEKRPR----RYPSYERPRDRDRSNRYPPPTRTDYRLVI 123
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
+ LP WQ LKDHMR+AG V + + G VD+ + DMK+AI+KLD SE
Sbjct: 124 SNLPHGCRWQHLKDHMRKAGPVGYVNIVH----GKGFVDFLHKSDMKYAIRKLDGSELST 179
Query: 174 AFSRAYVRVRE 184
+RV++
Sbjct: 180 PDDSCRIRVKK 190
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP + R+VE+ F K+G I D+K +AF+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
DF G++LRVE+ R + GRG SRR Y V V+GLP S SWQDLKDH
Sbjct: 70 DFGGNKLRVEVPFNARDNGKYNSRGRGMMGRG-SKSRRGRYVVEVSGLPLSGSWQDLKDH 128
Query: 129 MRRAGDVCFSQVFRDGSG 146
+R AG+ + VF++G+G
Sbjct: 129 LREAGECGHADVFKNGTG 146
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%), Gaps = 13/144 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP + R+VE+ F K+G I D+K +AF+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV------SRRSEYRVLVTGLPSSASW 122
DF G++LRVE+ R + S RGRG+ SRR Y V V+GLP S SW
Sbjct: 70 DFGGNKLRVEVPFNA-------RDNGKYSSRGRGMMGRGSKSRRGRYVVEVSGLPLSGSW 122
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSG 146
QDLKDH+R AG+ + VF++G+G
Sbjct: 123 QDLKDHLREAGECGHADVFKNGTG 146
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 23/178 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGNLP D+RERE+ D F +YG I + +K P RPP +AF+ +E +DA DA+R +
Sbjct: 4 VFVGNLPEDVRERELSDKFERYGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSMNNT 63
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
F G R+RVE++ G R RG ++YRV ++GLP + SWQDLKD
Sbjct: 64 TFGGSRIRVEMSRG------------IDDARPRG----TQYRVKISGLPDTMSWQDLKDF 107
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREYD 186
+R+ GDV S V R G+G+ + D+M AI+KLD ++ VR+RE D
Sbjct: 108 LRKGGDVVHSDVDRRGNGSAS---FATPDEMLRAIRKLDGTDLDG----ERVRIREDD 158
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 102/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R SS+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDSSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFKSYSDMKRALEKLDGTEV 165
>gi|413948773|gb|AFW81422.1| hypothetical protein ZEAMMB73_489346 [Zea mays]
Length = 446
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 77/117 (65%), Gaps = 3/117 (2%)
Query: 28 YKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRS 87
Y+YG I IDLKIPPRPP YA VEFE+ DA+DAI GRD Y+FDG+RL + +A
Sbjct: 269 YQYGRILDIDLKIPPRPPRYAVVEFEDPHDADDAIYGRDEYNFDGYRLLLIVAEASLILM 328
Query: 88 SSDRH-SSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 143
S H+ G V+VTGLPSS SWQDLKDHMRRAGDVCFS V+R+
Sbjct: 329 IVQAAISVHAVEVFLGA--LISMVVMVTGLPSSVSWQDLKDHMRRAGDVCFSDVYRE 383
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 104/178 (58%), Gaps = 22/178 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGNLP D+RER++ D F ++G I+ + +K P RPP +AF+ ++ DA DA+R G
Sbjct: 4 VFVGNLPEDVRERDLSDKFERFGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSMHGA 63
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
G RLRVE++ G R RG ++YRV ++GLP++ SWQDLKD
Sbjct: 64 MLSGCRLRVEMSRG-----------LVDDARPRG----TQYRVKISGLPATMSWQDLKDF 108
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREYD 186
+R+ GDV S V R G+GT + D+M+ AI++LD ++ VRVRE D
Sbjct: 109 LRKGGDVVHSDVDRRGNGTAS---FATSDEMRRAIRQLDGTDLDG----ERVRVREED 159
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 103/174 (59%), Gaps = 16/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D RE++D F +YG +++I + PPG+AFV+FE+ RDA+DAIR DG
Sbjct: 5 VYVGGLPRDATSREIQDGFNRYGHVSNI--WVARNPPGFAFVDFEDPRDADDAIRSMDGR 62
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSS-----------GRGRGVSRRSEYRVLVTGLP 117
DF G R+RVELA GG R R RGR +R++YRV VT LP
Sbjct: 63 DFLGGRIRVELARGGSRRDGGGRRGDDDRGGYGGRGGDRFDRGRNPPQRTDYRVRVTDLP 122
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
W+++KD +R G+V + + DGS I ++ DDM+ AIKKLDD+EF
Sbjct: 123 RDVDWRNVKDFLRTGGEVTYCNIEADGS---AIAEFQTKDDMEDAIKKLDDTEF 173
>gi|325182716|emb|CCA17171.1| splicing factor putative [Albugo laibachii Nc14]
Length = 224
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 12/159 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGNLP +I E ++ F K+G IA I LK+P RPP +AF+E+EE+ A++A+R +G
Sbjct: 4 IFVGNLPTEIDEETLQSHFSKHGQIACIRLKVPSRPPAFAFIEYEESSGADNAVRESNGI 63
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+ G ++RVE++ RS ++ SS + G ++YRV V+ L S SWQDLKD
Sbjct: 64 ELLGSKIRVEIS-----RSGPNQTRDTSSNKRFG----TQYRVTVSNLSSKISWQDLKDF 114
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
RR GDV + V GS G+ + YD+M+ AI+KLD
Sbjct: 115 FRRGGDVVHTNVDHSGS---GVGSFATYDEMERAIRKLD 150
>gi|355778262|gb|EHH63298.1| Adapter-related protein complex 3 subunit beta-2 [Macaca
fascicularis]
Length = 1156
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 103/190 (54%), Gaps = 53/190 (27%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAI 62
+YV LP D+RE+++ED FYKY I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 7 CIYVVGLPTDVREKDLEDFFYKYDRIHEIELKNWHGLVP-----FAFVHFEDPRDAEDAI 61
Query: 63 RGRDGYDFDGHRLRVEL--AHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
GR+GYD+ RLRVE +GGRG
Sbjct: 62 YGRNGYDYGQCRLRVEFPRTYGGRG----------------------------------- 86
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR-AY 179
SWQDLKDHMR DVC++ V +DG G+V+Y DM++A++KLDD +F + S +Y
Sbjct: 87 SWQDLKDHMRAVWDVCYAHVQKDG---VGMVEYLRKADMEYALRKLDDIKFCSHDSETSY 143
Query: 180 VRVREYDHRR 189
+RV Y RR
Sbjct: 144 IRV--YPERR 151
>gi|344295340|ref|XP_003419370.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Loxodonta africana]
Length = 174
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 93/137 (67%), Gaps = 9/137 (6%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR 106
+AFV FE RDAEDAI GR+GYD+ RLRVE R+ R GR +RR
Sbjct: 7 FAFVRFETPRDAEDAIYGRNGYDYGQCRLRVEFP-----RAYGGRGGWPRGGRNGPPTRR 61
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
S++RVLV+GLP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KL
Sbjct: 62 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKL 118
Query: 167 DDSEFR-NAFSRAYVRV 182
DD++FR + +Y+RV
Sbjct: 119 DDTKFRSHEGETSYIRV 135
>gi|296213104|ref|XP_002753142.1| PREDICTED: serine/arginine-rich splicing factor 9, partial
[Callithrix jacchus]
Length = 167
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 93/136 (68%), Gaps = 9/136 (6%)
Query: 48 AFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRS 107
AFV FE+ RDAEDAI GR+GYD+ RLRVE R+ R GR +RRS
Sbjct: 1 AFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRS 55
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
++RVLV+GLP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLD
Sbjct: 56 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLD 112
Query: 168 DSEFR-NAFSRAYVRV 182
D++FR + +Y+RV
Sbjct: 113 DTKFRSHEGETSYIRV 128
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|300121283|emb|CBK21663.2| unnamed protein product [Blastocystis hominis]
Length = 381
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 106/174 (60%), Gaps = 13/174 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++V NLP D+RE E++D F +YG + + LK+ P Y FVEFEE AE+A++G++G
Sbjct: 5 VFVANLPKDVRESELKDEFSRYGTVIDVTLKLTGHTP-YGFVEFEEESAAEEAVKGKNGS 63
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
G LRVE+A+ GRG DR S + G + YRV VT LP SWQDLKDH
Sbjct: 64 VLGGLSLRVEVAN-GRG-PKGDRGSKY------GPPVHTNYRVEVTHLPYHCSWQDLKDH 115
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
MR+ GDV + V G GIV+YTNYDDM AIK LDDS+ + +Y+ V
Sbjct: 116 MRKEGDVGYCSV----DGGVGIVEYTNYDDMMRAIKYLDDSKCLSRGESSYIHV 165
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 101/165 (61%), Gaps = 9/165 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+GNLP D +RE+E+ F K+G I + +LK +AF+EF ++RDA DAIR +DGY
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFGRIIYCELKKSYSGSPFAFIEFSDSRDARDAIRDKDGY 68
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+F G +LRVEL R + R S +RR +Y + VTGLP S SWQDLKDH
Sbjct: 69 EFHGKKLRVELPF--RYKDEPRRPSGRRYRT----TRRGKYVLEVTGLPPSGSWQDLKDH 122
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
MR AG+ + VFR G G + + + DM +AI++ D S FR+
Sbjct: 123 MRDAGECGHADVFR---GGVGEITFFSRSDMDYAIERFDGSTFRS 164
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Monodelphis
domestica]
Length = 491
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 11/163 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGNLP +I E E+E F ++G I ++ LK P RPP +AF+E+E+ RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+ G +RVE++ G S ++ GR G +++RV ++ +P S SWQDLKD
Sbjct: 87 ELHGAEIRVEISRNGPKASRDEKF----GGRHHG----TQFRVELSNIPRSVSWQDLKDF 138
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+R G V + V R G+ G+ +TN +M+ AI+KL D++
Sbjct: 139 LRIGGVVVHADVDRRGN---GVASFTNQQEMERAIRKLKDAKL 178
>gi|242011682|ref|XP_002426576.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
gi|212510716|gb|EEB13838.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
Length = 176
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 87/130 (66%), Gaps = 10/130 (7%)
Query: 62 IRGRDGYDFDGHRLRVELAHGG------RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTG 115
+ RDGYD+DG+RLRVE GG RS GR +RRS++RVLVTG
Sbjct: 1 VHARDGYDYDGYRLRVEFPRGGGPGSYRGNRSGGSSGGDRGGGRRGPPARRSQFRVLVTG 60
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAF 175
LP S SWQDLKDHMR AGDVCF+ VF+DG TG+V++ +DMK+A+KKLDDS FR+
Sbjct: 61 LPPSGSWQDLKDHMREAGDVCFADVFKDG---TGVVEFLRLEDMKYAVKKLDDSRFRSHE 117
Query: 176 SR-AYVRVRE 184
+YVRV+E
Sbjct: 118 GEVSYVRVKE 127
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLKN-----GYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|156084620|ref|XP_001609793.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797045|gb|EDO06225.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 239
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 103/177 (58%), Gaps = 10/177 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP ++++ED F K+G + DLK +AF+E+E+ARDA DAI+ RDG
Sbjct: 10 VYVGNLPESCTQKDIEDEFGKFGKLISCDLKKNAGGSTFAFLEYEDARDAHDAIKDRDGS 69
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+++G RLRVE + R + RR Y V V+GLP + SWQDLKDH
Sbjct: 70 EYEGRRLRVETPFSAKDDGRPARRRGPGA------PRRGRYIVEVSGLPPTGSWQDLKDH 123
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVRE 184
MR AG+ + VFR G G V + + DM++AI K D S F+ + ++ +RVRE
Sbjct: 124 MREAGECAHADVFR---GGVGEVSFYSRSDMEYAIDKFDGSTFKSHEGEKSKIRVRE 177
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|351700803|gb|EHB03722.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 266
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 114/210 (54%), Gaps = 35/210 (16%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAI 62
+YV NL R K G I I+LK +P +AFV F++ RDAEDAI
Sbjct: 65 CIYVANLRQTCSRRTC-----KCGRICEIELKNRHGLVP-----FAFVRFKDPRDAEDAI 114
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
GR+GYD+ RLRVE R+ R GR +R S++RVLV+GLP S SW
Sbjct: 115 CGRNGYDYGQCRLRVEFP-----RTYGGRGGCPRGGRTGAPARGSDFRVLVSGLPPSGSW 169
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVR 181
QDLKDH+ AGDVC++ V +DG G+V++ +DM +A++KLDD++FR + +Y+R
Sbjct: 170 QDLKDHIPEAGDVCYADVQKDG---MGMVEHLRKEDMDYALRKLDDTKFRSHEGETSYIR 226
Query: 182 VREYDHRRDGSQSPSRGRSYSRGRSESRSR 211
V P R SY S S SR
Sbjct: 227 V-----------YPERNTSYCYSWSRSGSR 245
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 11/163 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGNLP +I E E+E F ++G I ++ LK P RPP +AF+E+E+ RDAEDA++ G
Sbjct: 27 IFVGNLPQEISEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGK 86
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+ G +RVE++ G S ++ GR G +++RV ++ +P S SWQDLKD
Sbjct: 87 ELHGAEIRVEISRNGPKASRDEKF----GGRHHG----TQFRVELSNIPRSVSWQDLKDF 138
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+R G V + V R G+ G+ +TN +M+ AI+KL D++
Sbjct: 139 LRIGGVVVHADVDRRGN---GVASFTNQQEMERAIRKLKDAKL 178
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 100/164 (60%), Gaps = 7/164 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L +RER++E F +G I + LK G+ FVEF++ RDA+DA+ +G
Sbjct: 4 VYVGHLSYRVRERDLERFFRGFGKIREVLLK-----NGFGFVEFDDYRDADDAVYELNGR 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSASWQDLKD 127
+ DG R+ VELAHG R R + SG R G R++YRV++ L S SWQDLKD
Sbjct: 59 ELDGERVVVELAHGTARRPPPPRSAWADSGTNRYGPPTRTDYRVIIENLSSRISWQDLKD 118
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
MR+ GDV ++ R G+V++ +Y DMK AI+KLD++E
Sbjct: 119 RMRQVGDVTYADAHRH-RRNEGVVEFASYSDMKRAIEKLDNTEI 161
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFLSYSDMKRALEKLDGTEV 165
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 101/174 (58%), Gaps = 23/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR GR G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 165
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 13/170 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDIQRFFGGYGKLLEVDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHG------GRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSAS 121
D G R+ VE A G G G S + + SGR + G R+E+R++V L S S
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYGYGSRSGYRNQRSGRDKYGPPVRTEFRLIVENLSSRCS 118
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQDLKD MR+AG+V ++ ++ G++++ +Y DMK A++KLD +E
Sbjct: 119 WQDLKDFMRQAGEVTYADAHKE-RANEGVIEFRSYSDMKRAMEKLDGTEI 167
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 13/170 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLGYHVREKDLQRFFGGYGKLLEIDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHG------GRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSAS 121
D G R+ +E A G G G S + + +GR + G R+E+R++V L S S
Sbjct: 59 DLCGERVIIEHARGPRRDRDGYGYGSRSGYRNQRTGRDKYGPPVRTEFRLVVENLSSRCS 118
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQDLKD MR+AG+V ++ ++ G++++ +Y DMK A++KLD +E
Sbjct: 119 WQDLKDFMRQAGEVTYADAHKE-RANEGVIEFRSYSDMKRAVEKLDGTEI 167
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 95/159 (59%), Gaps = 7/159 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG L D+RER++E F YG I + LK GY FVEF++ RDAEDA+ +G
Sbjct: 5 VFVGRLNYDVRERDLEKFFKGYGRIGEVLLK-----NGYGFVEFDDYRDAEDAVHDLNGK 59
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
G R+ VELA G R R + SS R G R+EY++LV L SS SWQDLKD
Sbjct: 60 KLMGERISVELARGIR-RGPGTGYGGASSSRRYGPPSRTEYQLLVENLSSSVSWQDLKDF 118
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
MR+AG+V ++ + G+V++ Y DMK+A+ KL+
Sbjct: 119 MRQAGEVTYTDAHKL-RRNEGVVEFATYSDMKNALIKLN 156
>gi|354497469|ref|XP_003510842.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Cricetulus griseus]
Length = 201
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 9/127 (7%)
Query: 57 DAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
DAEDAI GR+GYD+ RLRVE GR+ R R +RRS++RVLV+GL
Sbjct: 44 DAEDAIYGRNGYDYGQCRLRVEFPRTYGGRAGWPR-----GARNGPPTRRSDFRVLVSGL 98
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAF 175
P S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR +
Sbjct: 99 PPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEG 155
Query: 176 SRAYVRV 182
+Y+RV
Sbjct: 156 ETSYIRV 162
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 19/176 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G+L +RER+V+ F YG + I LK G+ FVEFE+ RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLKN-----GFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 DFDGHRLRVELAHGGR----GRSSSDRHSSHSSGRGR---------GVSRRSEYRVLVTG 115
+ G R+ VELAHG R GR + S GR G R+ Y+++V
Sbjct: 60 ELLGERVSVELAHGSRRGPGGRIVAPGSRDWRSPPGRFNAPRESRFGPPVRTNYQLIVEN 119
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V F+ + GIV+++NY DM++A+ KLD+++
Sbjct: 120 LSSHVSWQDLKDYMRQAGEVTFTDAHSN-RPNQGIVEFSNYADMRNALNKLDNTDL 174
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 19/176 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L +RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYVGRLGYHVREKDIQRFFGSYGKLLEVDLKN-----GYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHG------GRGRSSSDRHSS------HSSGRGR-GVSRRSEYRVLVTG 115
D G R+ VE A G G G S +H S SGR + G R+E+R++V
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYGYGSRSKHGSPGGYRNQRSGRDKYGPPVRTEFRLVVEN 118
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD MR+AG+V ++ ++ G++++ +Y D+K A++KLD +E
Sbjct: 119 LSSRCSWQDLKDFMRQAGEVTYADAHKE-RPNEGVIEFRSYSDLKRAVEKLDGTEI 173
>gi|298710995|emb|CBJ32302.1| arginine/serine-rich splicing factor 6 [Ectocarpus siliculosus]
Length = 235
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 21/176 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G+L R+R+++ F +YG I ID+++ G+AF+EFE+ RDAEDA+ DG
Sbjct: 5 IYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRM-----GFAFIEFEDRRDAEDAVAEMDGR 59
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+FDG R+ V+ GRG H + +RR+E+R+ V GL S SWQDLKD
Sbjct: 60 EFDGARIVVQ---PGRG---------HRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDF 107
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
R+AG V +S VF G+V+Y + DDMK AI+ LDD+ Y+RVRE
Sbjct: 108 GRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTR----LGGKYIRVRE 159
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 21/178 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G+L +RER+V+ F YG + I LK G+ FVEFE+ RDA+DAI+ +G
Sbjct: 5 VFIGHLSYQVRERDVDRFFKGYGRVGDIHLK-----NGFGFVEFEDHRDADDAIKDLNGK 59
Query: 69 DFDGHRLRVELAH------GGRGRSSSDRHSSHSSGRGR---------GVSRRSEYRVLV 113
+ G R+ VELAH GGR + R G GR G R+ Y+++V
Sbjct: 60 ELLGERVSVELAHGSRRGPGGRIVAPGSRDWRSPPGGGRFNAPRESRFGPPVRTNYQLVV 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V F+ + GIV+++NY DM++A+ KLD+++
Sbjct: 120 ENLSSHVSWQDLKDYMRQAGEVTFTDAHSN-RPNQGIVEFSNYADMRNALNKLDNTDL 176
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 101/173 (58%), Gaps = 23/173 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR-GRGVSR----------RSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR G G R R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 113 SRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTE 164
>gi|384494440|gb|EIE84931.1| hypothetical protein RO3G_09641 [Rhizopus delemar RA 99-880]
Length = 252
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 99/172 (57%), Gaps = 20/172 (11%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS+R +Y+G L D +R++E LF YG I I+LK G+ FVEF + RDA+D
Sbjct: 1 MSTR----VYIGRLARDASKRDIERLFKNYGDIREINLKT-----GFGFVEFADERDAKD 51
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR-RSEYRVLVTGLPSS 119
+ G F G RL VE+A G R H R RG R RS YR++V +
Sbjct: 52 VVYDFHGKSFLGERLIVEIAKGTR---------RHDERRPRGNDRSRSHYRLIVENIAPG 102
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+WQDLKD MR+AG+V F+ + RD + GIV++ DDM++A+KKL+D E
Sbjct: 103 TNWQDLKDMMRKAGEVTFADISRD-RPSEGIVEFHVRDDMEYALKKLNDREL 153
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 13/172 (7%)
Query: 2 SSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLK--IPPRPPGYAFVEFEEARDAE 59
++R+ ++VGNLP + R++ DLF K+G I ID+K YAF++F R AE
Sbjct: 8 ANRSPSCVFVGNLPEKVDNRDIHDLFDKFGEIKDIDIKHGKTTNYTSYAFIDFASVRSAE 67
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
DA+ RDGY++D ++LRVE A G+ R H R R++YR++++ LP
Sbjct: 68 DAVDSRDGYEYDRYKLRVEFAGEGKPR-------KHDDDRRDRDRHRTDYRLVISNLPHG 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQ LKDHMR+AG V + + S G VD+ + DMK+A++K+D SE
Sbjct: 121 CRWQHLKDHMRKAGPVGYVNI----SHGKGYVDFIHKSDMKYALRKMDGSEL 168
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo sapiens]
Length = 142
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 79/120 (65%), Gaps = 3/120 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV---SRRSEYRVLVTGLPSSASWQDL 125
D+DG+RLRVE GRG SRRSE RV+V+GLP S SWQDL
Sbjct: 78 DYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDL 137
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 65/80 (81%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
A ++VGNLP D+REREVEDLF+KYG I +DLKI PRPP +AFVEFE+ RDA DA+RG
Sbjct: 2 AGTRVFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRG 61
Query: 65 RDGYDFDGHRLRVELAHGGR 84
RDG +F G RLRVE++HG R
Sbjct: 62 RDGIEFQGQRLRVEVSHGRR 81
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 65/83 (78%)
Query: 102 GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKH 161
G SRR+++RV+VT LP S SWQDLKDHMRRAG+V FSQV RDG G G++DY D++
Sbjct: 162 GPSRRTDFRVIVTNLPLSCSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATRSDLEL 221
Query: 162 AIKKLDDSEFRNAFSRAYVRVRE 184
A++KLDDSEF+N + A +RVRE
Sbjct: 222 ALRKLDDSEFKNPYDTARIRVRE 244
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 98/171 (57%), Gaps = 14/171 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG L +RER++E F KYG I + +K G+AFVEF++ RDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 DFDGHRLRVELAHG-------GRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSA 120
+ G R+ VE A G RG R + G R+EYR++V L S
Sbjct: 60 ELLGERVSVERARGTPRGCDQWRGSGGRGYGPPRGRSRDKYGPPTRTEYRLIVENLSSRV 119
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD+MR+AG+V ++ + G+V++ +Y DMK+AI KLDD+E
Sbjct: 120 SWQDLKDYMRQAGEVTYADAHKQRR-NEGVVEFASYSDMKNAIDKLDDTEL 169
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 17/176 (9%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+SR +YVG L D+RER++E F +G I I +K G+ FVEF++ RDA+D
Sbjct: 1 MTSR----VYVGRLNYDVRERDLERFFKGFGRIREISIKN-----GFGFVEFDDPRDADD 51
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG-----RGRGVSRRSEYRVLVTG 115
A+ +G D G R+ VELA G R +D + S S+ R G R+EY++ V
Sbjct: 52 AVYELNGKDLMGDRVSVELARG--IRRGADYYRSRSTAPSPPRRRYGPPTRTEYQLTVEN 109
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ Y DMK+A+ KLD+++
Sbjct: 110 LSSRVSWQDLKDYMRQAGEVTYADAHK-LRRNEGVVEFATYSDMKNALDKLDNTDL 164
>gi|403224084|dbj|BAM42214.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 259
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 102/165 (61%), Gaps = 11/165 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+GNLP D ++E+E+ F K+G I + DLK +AF+EF ++RDA DAIR +DG+
Sbjct: 9 IYIGNLPSDCSQKELEEEFEKFGRILYCDLKRSYTGSSFAFIEFSDSRDARDAIRDKDGF 68
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+F G +LRVEL R ++ S G R RR +Y + VTGLP S SWQDLKDH
Sbjct: 69 EFHGKKLRVELPFRERDQA--------SGGSRRHGPRRGKYVLEVTGLPPSGSWQDLKDH 120
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
MR AG + VFR G G + + + DM++AI+K D S F++
Sbjct: 121 MRDAGHCGHADVFR---GGVGEISFFSRSDMEYAIEKYDGSTFKS 162
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 17/176 (9%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+SR +YVG L D+RER++E F +G I I +K G+ FVEF++ RDA+D
Sbjct: 1 MTSR----VYVGRLNYDVRERDLERFFKGFGRIREISIKN-----GFGFVEFDDPRDADD 51
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG-----RGRGVSRRSEYRVLVTG 115
A+ +G D G R+ VELA G R +D + S S+ R G R+EY++ V
Sbjct: 52 AVYELNGKDLMGDRVSVELARGIR--RGADYYRSRSTAPSPPRRRYGPPTRTEYQLTVEN 109
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ Y DMK+A+ KLD+++
Sbjct: 110 LSSRVSWQDLKDYMRQAGEVTYADAHK-LRRNEGVVEFATYSDMKNALDKLDNTDL 164
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 97/176 (55%), Gaps = 34/176 (19%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR ++VEDLFYKYG I IDLK P +AFV+FE+ RDAEDA+ GRDGY
Sbjct: 17 IYVGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDGY 76
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D+DG+RLRVE GRG P
Sbjct: 77 DYDGYRLRVEFPRSGRGGGGGGGGGGGGM------------------GPXXXXXX----- 113
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVR 183
C++ VFRDG TG+V++ +DM +A++KLD+++FR + AY+RV+
Sbjct: 114 -------CYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 159
>gi|432092851|gb|ELK25217.1| Serine/arginine-rich splicing factor 9 [Myotis davidii]
Length = 199
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 87/128 (67%), Gaps = 9/128 (7%)
Query: 56 RDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTG 115
RDAEDA+ GR+GYD+ RLRVE R+ R GR +RRS++RVLV+G
Sbjct: 41 RDAEDAVYGRNGYDYGQCRLRVEFP-----RAYGGRGGWPRGGRNGPPTRRSDFRVLVSG 95
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NA 174
LP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR +
Sbjct: 96 LPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHE 152
Query: 175 FSRAYVRV 182
+Y+RV
Sbjct: 153 GETSYIRV 160
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 97/168 (57%), Gaps = 20/168 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LYVG + D RER+VE LF KYG + LK G+ FVEF++ RDA+DA+R G
Sbjct: 4 LYVGRVSADARERDVEHLFGKYGRTRDVTLK-----NGFGFVEFDDVRDADDAMRDLHGR 58
Query: 69 DFDGHRLRVELAHGG----RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
DF G RL VE A+ G RG R + + R++YRVLV L + SWQD
Sbjct: 59 DFMGDRLIVERANSGGRRDRGEPRERRFAPPT---------RTQYRVLVENLSTRISWQD 109
Query: 125 LKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
LKD +R G +V F+ R+ G TG+V++ N DM+HAI++LD +
Sbjct: 110 LKDFVRTCGVEVTFADAHRERDG-TGVVEFANSTDMRHAIRRLDGKDL 156
>gi|297263673|ref|XP_001089031.2| PREDICTED: splicing factor, arginine/serine-rich 9-like [Macaca
mulatta]
Length = 162
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 87/128 (67%), Gaps = 9/128 (7%)
Query: 56 RDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTG 115
RDAEDAI GR+GYD+ RLRVE R+ R GR +RRS++RVLV+G
Sbjct: 4 RDAEDAIYGRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSG 58
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NA 174
LP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR +
Sbjct: 59 LPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHE 115
Query: 175 FSRAYVRV 182
+Y+RV
Sbjct: 116 GETSYIRV 123
>gi|338727750|ref|XP_001488704.3| PREDICTED: serine/arginine-rich splicing factor 9 [Equus caballus]
Length = 289
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 9/127 (7%)
Query: 57 DAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
DAEDAI GR+GYD+ RLRVE R+ R GR +RRS++RVLV+GL
Sbjct: 132 DAEDAIYGRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGL 186
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAF 175
P S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR +
Sbjct: 187 PPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSHEG 243
Query: 176 SRAYVRV 182
+Y+RV
Sbjct: 244 ETSYIRV 250
>gi|355786589|gb|EHH66772.1| hypothetical protein EGM_03825, partial [Macaca fascicularis]
Length = 159
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 87/128 (67%), Gaps = 9/128 (7%)
Query: 56 RDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTG 115
RDAEDAI GR+GYD+ RLRVE R+ R GR +RRS++RVLV+G
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSG 55
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NA 174
LP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR +
Sbjct: 56 LPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHE 112
Query: 175 FSRAYVRV 182
+Y+RV
Sbjct: 113 GETSYIRV 120
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----GRSSSDRHSSHSSGRGR---GVSRRSEYRVLVTGLPSSAS 121
D G R+ VE A G R G S R S GR G R+EYR++V L S S
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRRYSSRRATGRDKYGPPVRTEYRLIVENLSSRCS 118
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 WQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 167
>gi|221130958|ref|XP_002164143.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Hydra magnipapillata]
Length = 264
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 107/180 (59%), Gaps = 15/180 (8%)
Query: 1 MSSRASRT---LYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEA 55
MSSR + ++VG L + R R++E+ F G + +++K+ GYAFVEFE+
Sbjct: 1 MSSRDNPNRNRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDK 55
Query: 56 RDAEDAIRGRDGYDFDGHRLRVELA-HGGRG---RSSSDRHSSHSSGRGRGVSRRSEYRV 111
RDA+DA+ D +F G RL VE A HG R + DR H + RGRG +E+R+
Sbjct: 56 RDADDAVYELDRKEFFGSRLTVEHAKHGPRADMDKRDGDRRKGHENDRGRGRPYNTEWRL 115
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+VT L S W DLKD+ R AG+V F++ ++ G G+V++ +Y +MK A+KK D SEF
Sbjct: 116 IVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG-EGVVEFRSYREMKRALKKFDGSEF 174
>gi|395513899|ref|XP_003761159.1| PREDICTED: serine/arginine-rich splicing factor 9 [Sarcophilus
harrisii]
Length = 274
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 83/127 (65%), Gaps = 12/127 (9%)
Query: 57 DAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
DAEDAI GR+GYD+ RLRVEL G R S RRSEYRVLV+GL
Sbjct: 120 DAEDAIYGRNGYDYGQCRLRVELPRNPGGGGPRGRTGPPS--------RRSEYRVLVSGL 171
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAF 175
P S SWQDLKDHMR AG VC++ V +DG G+V++ +DM++A+++LDDS+FR +
Sbjct: 172 PPSGSWQDLKDHMREAGGVCYADVQKDG---MGVVEFLRKEDMEYALRRLDDSKFRSHEG 228
Query: 176 SRAYVRV 182
+Y+RV
Sbjct: 229 ETSYIRV 235
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 97/171 (56%), Gaps = 16/171 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L RER+VE F +G I + LK G+ FVEF++ RDAEDAI +
Sbjct: 4 VYVGRLSYRARERDVEHFFRGFGKIREVTLK-----NGFGFVEFDDPRDAEDAIYELNNR 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHS-------SHSSGRGR-GVSRRSEYRVLVTGLPSSA 120
D G R+ VE A G R DR S+ R R G R +E+R+++ L S A
Sbjct: 59 DLMGERVIVEFAKGTR---YDDRRGAYPLITPSYLLFRPRFGRPRNTEWRLVINNLSSRA 115
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+W+D+KD+MR+AGDV F+ + G+VD+ YDDMK A+K+LD +E
Sbjct: 116 TWRDIKDYMRQAGDVTFADAHKQLGEGRGVVDFATYDDMKDALKRLDGTEL 166
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 96/164 (58%), Gaps = 7/164 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP ER++E F YG + + +K GY FVEF++ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGG-RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
G R+ VE A G RGR S H S G R+ YR++V L S SWQDLKD
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHRSHERYGPPTRTNYRLIVENLSSRISWQDLKD 120
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+MR+AG+V ++ + G+V++ +Y D+K+AI+KLDD+E
Sbjct: 121 YMRQAGEVTYADAHKQHR-NEGVVEFASYSDLKNAIEKLDDTEL 163
>gi|328770953|gb|EGF80994.1| hypothetical protein BATDEDRAFT_36927 [Batrachochytrium
dendrobatidis JAM81]
Length = 246
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 136/256 (53%), Gaps = 19/256 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MSS +R +Y+G LP DI EREVE L ++G I + G+AFVE+ ++RDA D
Sbjct: 1 MSSGYTR-VYIGRLPRDITEREVERLAREFGRIRDVRCL-----NGFAFVEYSDSRDARD 54
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+R DG +D RL V+ A G R DR +S S RR +Y ++V GLP+
Sbjct: 55 CVRELDGSRYDRERLSVQPAKSGSDRR--DRPASSSL-------RRGDYGIVVQGLPART 105
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SWQDLKD R+ GDV F+ + D SG GIV++T+ D AI++ D +EF+ A
Sbjct: 106 SWQDLKDLFRKVGDVIFTNI--DNSG-DGIVEFTSETDKNSAIEQFDKTEFQGAVISVKD 162
Query: 181 RVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSPDR 240
R D +SP R S R S R S R RS S R +S SP+ S SP R
Sbjct: 163 RDAANGKDSDARRSPDRRGSPGRRSSPGRRSSPRRDRSVSPRRDRSVSPRRDRS-VSPRR 221
Query: 241 SRSRSASRSRSGSKPR 256
RS S R RS + PR
Sbjct: 222 DRSVSPRRDRSITPPR 237
>gi|440909520|gb|ELR59420.1| Serine/arginine-rich splicing factor 9, partial [Bos grunniens
mutus]
Length = 159
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 87/128 (67%), Gaps = 9/128 (7%)
Query: 56 RDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTG 115
RDAEDAI GR+GYD+ RLRVE R+ R GR +RRS++RVLV+G
Sbjct: 1 RDAEDAIYGRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRSGPPTRRSDFRVLVSG 55
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NA 174
LP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLD+++FR +
Sbjct: 56 LPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDETKFRSHE 112
Query: 175 FSRAYVRV 182
+Y+RV
Sbjct: 113 GETSYIRV 120
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 96/164 (58%), Gaps = 7/164 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP ER++E F YG + + +K GY FVEF++ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTTERDLERFFRGYGRMRDVLIK-----NGYGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGG-RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
G R+ VE A G RGR S H S G R+ YR++V L S SWQDLKD
Sbjct: 61 KLLGERVTVERARGTPRGRDQWSSRSDHRSHERYGPPTRTNYRLIVENLSSRISWQDLKD 120
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+MR+AG+V ++ + G+V++ +Y D+K+AI+KLDD+E
Sbjct: 121 YMRQAGEVTYADAHKQHR-NEGVVEFASYSDLKNAIEKLDDTEL 163
>gi|403281819|ref|XP_003932372.1| PREDICTED: serine/arginine-rich splicing factor 9 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 86/126 (68%), Gaps = 10/126 (7%)
Query: 48 AFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRS 107
A V F++ DAEDAI GR+GYD+ RLRVE R+ R GR +RRS
Sbjct: 9 AIVVFQQ--DAEDAIYGRNGYDYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRS 61
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
++RVLV+GLP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLD
Sbjct: 62 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLD 118
Query: 168 DSEFRN 173
D++FR+
Sbjct: 119 DTKFRS 124
>gi|355564745|gb|EHH21245.1| hypothetical protein EGK_04262, partial [Macaca mulatta]
Length = 159
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 86/128 (67%), Gaps = 9/128 (7%)
Query: 56 RDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTG 115
RDAEDAI GR+GYD+ LRVE R+ R GR +RRS++RVLV+G
Sbjct: 1 RDAEDAIYGRNGYDYGQCWLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSG 55
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NA 174
LP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR +
Sbjct: 56 LPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFRSHE 112
Query: 175 FSRAYVRV 182
+Y+RV
Sbjct: 113 GETSYIRV 120
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 101/172 (58%), Gaps = 15/172 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +DLK GY FVEFE++RDAEDA+ +G
Sbjct: 4 VYIGRLSYHVREKDLQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDAEDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR--------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSS 119
D G R+ VE A G R S S +SGR + G R+EYR++V L S
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYSSRSGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR 118
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 CSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 169
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 98/168 (58%), Gaps = 15/168 (8%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
A R +YVG +P D +VE F +YG + +D++I G+ F+E++ RDAEDA+
Sbjct: 4 AGRRIYVGRIPPDASRTDVEKYFGRYGTL--MDVRIMA---GFGFLEYDSVRDAEDAVHD 58
Query: 65 RDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+G DF G RL VE A RGR HS G G RR +R+LV GL SWQD
Sbjct: 59 LNGRDFMGERLIVEFAKAPRGR------DIHSGGHG---PRRGGFRLLVKGLSHETSWQD 109
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
LKD R+AG+V + V R+ G G++++ + DD +AI+KLD +E +
Sbjct: 110 LKDFARQAGNVTRADVDRNMPG-EGLIEFASQDDADNAIRKLDGTELK 156
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 24/181 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG L +RER++E F KYG I + +K G+AFVEF++ RDA+DA+ +G
Sbjct: 5 VFVGGLTYRVRERDIEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADDAVYELNGK 59
Query: 69 DFDGHRLRVELAHG-------GRG-----------RSSSDRHSSHSSGRGRGVSRRSEYR 110
+ G R+ VE A G RG RS +R S G R+EYR
Sbjct: 60 ELLGERVSVERARGTPRGCDQWRGSGGRGYGPPRGRSRDNREPDMRSHDRYGPPTRTEYR 119
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
++V L S SWQDLKD+MR+AG+V ++ + G+V++ +Y DMK+AI KLDD+E
Sbjct: 120 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR-NEGVVEFASYSDMKNAIDKLDDTE 178
Query: 171 F 171
Sbjct: 179 L 179
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 19/176 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + IDLK GY FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR-----------GRSSSDRHSSHS-SGRGR-GVSRRSEYRVLVTG 115
+ G R+ VE A G R G S+ +SS S SGR + G R+EYR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGYWGGGRSNGYSSRSRSGRDKYGPPVRTEYRLIVEN 118
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD MR+AG+V ++ ++ + G++++ Y DMK A+ KLD ++
Sbjct: 119 LSSRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRTYSDMKRALDKLDGTDI 173
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 64/76 (84%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LY+GNLP D++E+++ED+FYKYG I + LK+P RPP + FV FE++RDA++A+R RDGY
Sbjct: 56 LYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGY 115
Query: 69 DFDGHRLRVELAHGGR 84
DFDG+RLRVE++ G R
Sbjct: 116 DFDGYRLRVEMSRGKR 131
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 105 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
R++EYR +VTGLP SASWQDLKDHMR+AGDV ++ V G G+V + N + M +A++
Sbjct: 190 RQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDHKGG---GVVHFNNKEGMDYALR 246
Query: 165 KLDDSEFRNAFSRAYVRV 182
KLD SEF N + A + V
Sbjct: 247 KLDGSEFSNRYDTATISV 264
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2 [Takifugu
rubripes]
Length = 374
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 96/170 (56%), Gaps = 13/170 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVELAHGGR------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSAS 121
+ G R+ VE G R GRS GR R G R++YR++V L S S
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYSGRSKPRPGGYGRWGRDRYGPPIRTDYRLIVENLSSRCS 118
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQDLKD+MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 119 WQDLKDYMRQAGEVTYADTHK-GRKNEGVIEFRQYSDMKRALEKLDGTEV 167
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 38 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 92
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 93 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 152
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 153 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 205
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 103/196 (52%), Gaps = 35/196 (17%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS+R ++VG L +RER++E F KYG I + +K G+AFVEF++ RDA+D
Sbjct: 1 MSTR----VFVGGLTYRVRERDLEKFFRKYGRIKEVAMKN-----GFAFVEFDDYRDADD 51
Query: 61 AIRGRDGYDFDGHRLRVELAHG------------GRGRSSSDRHSSHSSGRGR------- 101
A+ +G + G R+ VE A G RG R S+ S R
Sbjct: 52 AVYELNGKELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSADSVNRNTRTASSYK 111
Query: 102 ------GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
G R+EYR+ V L S SWQDLKD+MR+AG+V ++ + G+V++
Sbjct: 112 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFAT 170
Query: 156 YDDMKHAIKKLDDSEF 171
Y D+K+AI KLDD+E
Sbjct: 171 YSDLKNAIDKLDDTEL 186
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 102/176 (57%), Gaps = 19/176 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G+L +RE++++ F YG + I LK G+ FVEF++ RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 DFDGHRLRVELAHGGR----GRSSSDRHSSHSSGRGR---------GVSRRSEYRVLVTG 115
+ G R+ VELA+G R GR R S R G +R+EY+++V
Sbjct: 60 ELLGERVSVELAYGSRRGPGGRIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLIVEN 119
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ NY DMK+AI KLD+++
Sbjct: 120 LSSHVSWQDLKDYMRQAGEVTYADAHK-IRPNEGVVEFANYSDMKNAISKLDNTDL 174
>gi|294890805|ref|XP_002773323.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239878375|gb|EER05139.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 317
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 34/213 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK------IPPRPPGYAFVEFEEARDAEDAI 62
+ V N+P +RERE++D+FYK+G I I+++ R YA+V+F + +DA DA
Sbjct: 4 IVVSNIPSTLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSS-----------------------DRHSSHSSGR 99
+ R+GY+ DG + VE+ R S S S +
Sbjct: 64 KSRNGYEIDGQPITVEVDGDYRDDSRSIPSKGKGKGGGRYGDYGGGYGKGGSGSPSAGYD 123
Query: 100 GRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDM 159
G+S + YRV+VT LP ASWQDLKD MR AG+ F++V RDG G G + D+
Sbjct: 124 SMGMSEKY-YRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDGVGVAG---FAGQSDV 179
Query: 160 KHAIKKLDDSEFRNAF-SRAYVRVREYDHRRDG 191
+ A++ LDD+E ++ F + +RV E+ + G
Sbjct: 180 ERAVRTLDDTEMKSHFGDTSIIRVEEFTDEKHG 212
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1 [Takifugu
rubripes]
Length = 374
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 95/165 (57%), Gaps = 8/165 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVELAHGG-RGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSASWQDLK 126
+ G R+ VE G R S R GR R G R++YR++V L S SWQDLK
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYSGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLK 118
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
D+MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 119 DYMRQAGEVTYADTHK-GRKNEGVIEFRQYSDMKRALEKLDGTEV 162
>gi|341902095|gb|EGT58030.1| CBN-RSP-3 protein [Caenorhabditis brenneri]
Length = 275
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 11/178 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M LYVGN+P D + ++ DLF YG + ++D+K + +AFV + + RDA+D
Sbjct: 1 MPQEDEAKLYVGNIPEDATKEDIYDLFETYGRVLYVDIK-NGKISRFAFVAYRDFRDADD 59
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG------RGRG-VSRRSEYRVLV 113
A+ D +D+ G LRVE + G R + S +G RG G RRS++RV V
Sbjct: 60 AVNYLDKFDYHGRSLRVEHSTGVGPRGWGGQPLSSINGDNFRIARGPGGPQRRSDFRVFV 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
G+P + SWQDLKDH R AG++CF+ + TGIV++ ++ +I D +EF
Sbjct: 120 EGIPQTGSWQDLKDHFRPAGEICFAMI---SHNKTGIVEFEKKSSVQRSIDIFDKTEF 174
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 98/175 (56%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LY+GN+ + RER+VE F YG + I LK GY FVEFE+ RDA+DA++ DG
Sbjct: 8 LYLGNVSDETRERDVEKFFKGYGKLREIALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVS------------RRSEYRVLVTGL 116
D +G R+RVE A R + R+ S SS R RR++YR+ V L
Sbjct: 63 DMNGSRVRVEFARSPRDKRGGSRYPSTSSRRSPPRGRRGAPIKRNPPGRRTQYRIRVENL 122
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S ASWQDLKD+ R GD+ ++ + G+V++ + M++A+ +LDD+E
Sbjct: 123 SSRASWQDLKDYFRSCGDITYTNAHK-PRNNEGVVEFGDKRAMENALDRLDDTEL 176
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 98/179 (54%), Gaps = 23/179 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGTRERDLEKFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRS---------------SSDRHSSHSSGRGRGVSRRSEYRVL 112
+ G R+ VE A G RG S +SS S+ R G R+EYR++
Sbjct: 61 ELLGERVVVEPARGTARGGSHRDRYDDRYGRRGRYDRYNNSSRSNSR-YGPPLRTEYRLI 119
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
V L S SWQDLKD+MR+AG+V ++ + G+V++ DMK AI+KLDD+E
Sbjct: 120 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQNR-NEGVVEFATLKDMKTAIEKLDDTEL 177
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 20/177 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR-GRSSSDRHSSH------------SSGRGR-GVSRRSEYRVLVT 114
+ G R+ VE A G R R SSH +SGR + G R+E+R++V
Sbjct: 59 ELCGERVIVEHARGPRRDRGDWVVVSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLIVE 118
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 NLSSRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 174
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKN-----GYGFVEFEDSRDADDAVYELNSK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 105/176 (59%), Gaps = 17/176 (9%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+SR +YVG L ++RER++E F +G I I +K G+ FVEF++ RDA+D
Sbjct: 1 MTSR----VYVGRLNYEVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDHRDADD 51
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRG-----RGVSRRSEYRVLVTG 115
A+ +G + G R+ VELA G R +D + S ++ R G R+EY++ V
Sbjct: 52 AVYELNGKELLGDRVSVELARG--IRRGADYYRSRAASRSPPRRRYGPPTRTEYQLTVEN 109
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ R G+V++ Y DMK+A++KLD+++
Sbjct: 110 LSSRVSWQDLKDYMRQAGEVTYADAHR-LRRNEGVVEFATYSDMKNALEKLDNTDL 164
>gi|320038617|gb|EFW20552.1| pre-RNA splicing factor Srp2 [Coccidioides posadasii str. Silveira]
gi|392870837|gb|EJB12074.1| pre-RNA splicing factor Srp2 [Coccidioides immitis RS]
Length = 302
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 104/175 (59%), Gaps = 9/175 (5%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +S LY+GNLP ++ +++VE+ F ++G D+K+ G+ F+E+E+A DA D
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKLMS---GFGFIEYEDALDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G DF G RL V+ A G R + + S S+ RR+ YR+ ++GLP +
Sbjct: 58 VVPAYHGTDFKGSRLTVQFARGPRHKETFSGPSDRSNA---PRPRRTPYRMQISGLPET- 113
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++G DV +S+ RD G G V++ D+K AI+KLD EF+ +
Sbjct: 114 SWQDLKDFARQSGLDVVYSETLRDHEG-RGFVEFETGADLKTAIEKLDGREFKGS 167
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 26/182 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRH-------------------SSHSSGRGRGVSRRSEY 109
+ G R+ VE A G S+ DR+ +S SS R G R+EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGNRRGGGGRYNDKNKNSRSSSR-YGPPLRTEY 119
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R++V L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+
Sbjct: 120 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDT 178
Query: 170 EF 171
E
Sbjct: 179 EL 180
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 101/173 (58%), Gaps = 18/173 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F +G I I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSS-----DRHSSHSSGRGR-----GVSRRSEYRVLVTGLPS 118
+ G R+ VE A G RS+ DRH S G GR G R+EYR++V + S
Sbjct: 61 ELLGERVVVEPARG-IDRSADRYRRGDRHYERSGG-GRSRYEYGPPTRTEYRLIVENVSS 118
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD+MR+AG+V ++ + G+V++ + DM+ AI+KLD +E
Sbjct: 119 RISWQDLKDYMRQAGEVTYADAHKQHR-NEGVVEFATHSDMRAAIEKLDGTEL 170
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Canis
lupus familiaris]
Length = 344
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+E+R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 15/180 (8%)
Query: 1 MSSRASRT---LYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEA 55
MSSR + ++VG L + R R++E+ F G + +++K+ GYAFVEFE+
Sbjct: 1 MSSRDNPNRNRIFVGRLNPEARVRDLENFFKDNGFSRLKDVNIKL-----GYAFVEFEDK 55
Query: 56 RDAEDAIRGRDGYDFDGHRLRVE----LAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRV 111
RDA+DA+ D +F G R+ VE A GG R DR RGRG +E+R+
Sbjct: 56 RDADDAVYELDRKEFFGSRITVEHATGTARGGDTRGERDRGGYSVRERGRGRPYNTEWRL 115
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+VT L S W DLKD+ R AG+V F++ ++ G G+V++ +Y +MK A+KK D SEF
Sbjct: 116 IVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG-EGVVEFRSYREMKRALKKFDGSEF 174
>gi|357511861|ref|XP_003626219.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501234|gb|AES82437.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 168
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 61/68 (89%), Gaps = 1/68 (1%)
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREYDHR 188
MRRAGDVCFSQVFRD G TGIV+YTNY+DMK+AI+KLDDSEFRNAFS AY+RVREYD R
Sbjct: 1 MRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYIRVREYDRR 60
Query: 189 RDGSQSPS 196
R ++SPS
Sbjct: 61 R-YTRSPS 67
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu rubripes]
Length = 379
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 12/169 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + IDLK GY FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR-----GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSASW 122
+ G R+ VE A G R S S +GR + G R+EYR++V L S SW
Sbjct: 59 ELCGERVIVEHARGPRRDRDFYGGGSGYSSRSRTGRDKYGPPVRTEYRLVVENLSSRCSW 118
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
QDLKD MR+AG+V ++ ++ + G++++ ++ DMK A+ KLD ++
Sbjct: 119 QDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSHSDMKRALDKLDGTDI 166
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
D G R+ VE A G R S +SGR + G R+E+R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
D G R+ VE A G R S ++GR + G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+E+R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 102/176 (57%), Gaps = 19/176 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G+L +RE++++ F YG + I LK G+ FVEF++ RDA+DAI +G
Sbjct: 5 VFIGHLSCQVREKDLDKFFKGYGRVGDIHLK-----NGFGFVEFDDHRDADDAISDLNGK 59
Query: 69 DFDGHRLRVELAHGGR----GRSSSDRHSSHSSGRGR---------GVSRRSEYRVLVTG 115
+ G R+ VELA+G R GR R S R G +R+EY+++V
Sbjct: 60 ELLGERVSVELAYGSRRGPGGRIVPPRPDWRSPPPRRPFAPRDTRFGPPQRTEYQLIVEN 119
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ NY DMK+AI KLD+++
Sbjct: 120 LSSHVSWQDLKDYMRQAGEVTYADAHK-IRPNEGVVEFANYSDMKNAISKLDNTDL 174
>gi|367029667|ref|XP_003664117.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
gi|347011387|gb|AEO58872.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 101/177 (57%), Gaps = 15/177 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + G DF G RL V+ A G R R H +S+ R RR+ +R+ +TGLP+
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGSRHREHG--HDRNSAPR----PRRTPHRMQITGLPN 109
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++G DV +S+ R+G GT G V++ D++ A++KLD EF+N
Sbjct: 110 DTSWQDLKDFARQSGADVVYSETNRNG-GTEGFVEFETAADLRTAVEKLDGREFKNV 165
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+E+R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Monodelphis
domestica]
Length = 340
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
D G R+ VE A G R S ++GR + G R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRGGGGGYSSRRATGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ +LD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDRLDGTEI 171
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 21/177 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRH--------------SSHSSGRGRGVSRRSEYRVLVT 114
+ G R+ VE A G S+ DR+ + SS R G R+EYR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYEDRYGGRRGGGGRYNDKSSSR-YGPPLRTEYRLIVE 119
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+E
Sbjct: 120 NLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDTEL 175
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 25/193 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF--RNAF 175
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E RN
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEINGRN-- 175
Query: 176 SRAYVRVREYDHR 188
+R+ EY R
Sbjct: 176 ----IRLIEYKPR 184
>gi|303317336|ref|XP_003068670.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108351|gb|EER26525.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 300
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 105/175 (60%), Gaps = 11/175 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +S LY+GNLP ++ +++VE+ F ++G D+K+ G+ F+E+E+A DA D
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQDVEEHFNQHGSGKITDIKL---MSGFGFIEYEDALDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ DG DF G RL V+ A G R + + S S+ RR+ YR+ ++GLP +
Sbjct: 58 VV--PDGTDFKGSRLTVQFARGPRHKETFSGPSDRSNA---PRPRRTPYRMQISGLPET- 111
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++G DV +S+ RD G G V++ D+K AI+KLD EF+ +
Sbjct: 112 SWQDLKDFARQSGLDVVYSETLRDHEG-RGFVEFETGADLKTAIEKLDGREFKGS 165
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus rotundus]
Length = 345
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
D G R+ VE A G R S +SGR + G R+E+R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 94/165 (56%), Gaps = 10/165 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRARENDVERFFKGYGKILEVDLKN-----GYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR---GVSRRSEYRVLVTGLPSSASWQDL 125
+ G R+ VE G R R S GR G R++YR++V L S SWQDL
Sbjct: 59 ELCGERVIVEHTKGPR-RDGGYSGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDL 117
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
KD+MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 118 KDYMRQAGEVTYADTHK-GRKNEGVIEFRQYSDMKRALEKLDGTE 161
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR---GV 103
Y FVEF++ RDA+DA+ +G + G R+ VE G R R S GR G
Sbjct: 1209 YGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTKGPR-RDGGYSGRSGYGRWGRDRYGP 1267
Query: 104 SRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAI 163
R++YR++V L S SWQDLKD+MR+AG+V ++ + G G++++ Y DMK A+
Sbjct: 1268 PIRTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHK-GRKNEGVIEFRQYSDMKRAL 1326
Query: 164 KKLDDSE 170
+KLD +E
Sbjct: 1327 EKLDGTE 1333
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus norvegicus]
Length = 339
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK-----NGYGFVEFEDSRDADDAVYELNSK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 99/175 (56%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR-----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGL 116
D G R+ VE A G R S SGR + G R+E+R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEFRLIVENL 118
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SSRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 172
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLGIDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R S +SGR + G R+E+R++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 100/181 (55%), Gaps = 24/181 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRSS-----------------SDRHSSHSSGRGRGVSRRSEYR 110
+ G R+ VE A G RG + +D++ + S G R+EYR
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYR 120
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
++V L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+E
Sbjct: 121 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDTE 179
Query: 171 F 171
Sbjct: 180 L 180
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 95/172 (55%), Gaps = 16/172 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L RE++VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYVGKLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR---------RSEYRVLVTGLPSS 119
D G R+ VE G R R +R + G R++YR++V L S
Sbjct: 59 DLCGKRVIVEHTIGQR-RDGGNRSGRSNRYGRGGGGGGGDRYGPPTRTDYRLIVENLSSR 117
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD+MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 118 CSWQDLKDYMRQAGEVTYADTNK-GRKNEGVIEFRQYSDMKRALEKLDGTEV 168
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 104/174 (59%), Gaps = 13/174 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+SR +YVG L ++RER++E F +G I I +K G+ FVEF++ RDA+D
Sbjct: 1 MTSR----VYVGRLNYEVRERDLERFFKGFGRIREISIK-----NGFGFVEFDDHRDADD 51
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS--DRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
A+ +G + G R+ VELA G R + R +S S R R G R+EY++ V L
Sbjct: 52 AVYELNGKELLGDRVSVELARGIRRGADYYRSRAASRSPPRRRYGPPTRTEYQLTVENLS 111
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ R G+V++ Y DMK+A+ KLD+++
Sbjct: 112 SRVSWQDLKDYMRQAGEVTYADAHRL-RRNEGVVEFATYSDMKNALDKLDNTDL 164
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 100/178 (56%), Gaps = 22/178 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRS--------------SSDRHSSHSSGRGRGVSRRSEYRVLV 113
+ G R+ VE A G RG + R++ SS R G R+EYR++V
Sbjct: 61 ELLGERVVVEPARGSARGSNRDRYDDRYGGRRGGGGGRYNEKSSSR-YGPPLRTEYRLIV 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+E
Sbjct: 120 ENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDTEL 176
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 25/182 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRSS------------------SDRHSSHSSGRGRGVSRRSEY 109
+ G R+ VE A G RG + ++++ + S G R+EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R++V L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDT 179
Query: 170 EF 171
E
Sbjct: 180 EL 181
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G + VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGEHVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 118/224 (52%), Gaps = 42/224 (18%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L DIRE ++E+ F YG I I LK GY FVEF+E RDA+DA+ +G
Sbjct: 6 VYVGQLTSDIRENDLENFFKGYGRIREITLK-----NGYGFVEFDERRDADDAVHDLNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSS---------HSSGRGRGVSRR------------- 106
G ++RVE+AH R S DR +S ++ RG SR
Sbjct: 61 PLLGEKIRVEMAH----RFSRDRFASGRGGGFRGRYNGDRGYDRSRHGGRWERRRPVNPP 116
Query: 107 --SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
S YR+LV L S+ SW++LKD M +AG+VCF+ V+ GIV++ + M++A+K
Sbjct: 117 RRSRYRLLVENLSSAISWRELKDFMNQAGEVCFTDVY--PQRREGIVEFESSSAMENALK 174
Query: 165 KLDDSEFRNAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSES 208
KL+ E R+R + + D ++S +R R+ G+ +S
Sbjct: 175 KLNGEELNGR------RIRITEEKLDSNKS-NRNRNSVMGQQQS 211
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 25/182 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRSS------------------SDRHSSHSSGRGRGVSRRSEY 109
+ G R+ VE A G RG + ++++ + S G R+EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R++V L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDT 179
Query: 170 EF 171
E
Sbjct: 180 EL 181
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + +DLK GY FVEFE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDLK-----NGYGFVEFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLP 117
+ G + VE A G R S +SGR + G R+EYR++V L
Sbjct: 59 ELCGEHVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 171
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 25/182 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRSS------------------SDRHSSHSSGRGRGVSRRSEY 109
+ G R+ VE A G RG + ++++ + S G R+EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R++V L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDT 179
Query: 170 EF 171
E
Sbjct: 180 EL 181
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 100/180 (55%), Gaps = 23/180 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRS---------------SSDRHSSHSSGRGR-GVSRRSEYRV 111
+ G R+ VE A G RG S D++ S+S R G R+EYR+
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRL 120
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+V L + SWQDLKD+MR+AG+V ++ + G+V++ DMK AI+KLDD+E
Sbjct: 121 VVENLSTRVSWQDLKDYMRQAGEVTYADAHKQ-RKNEGVVEFATLSDMKTAIEKLDDTEL 179
>gi|242782227|ref|XP_002479958.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
gi|218720105|gb|EED19524.1| electron transfer flavoprotein-ubiquinone oxidoreductase
[Talaromyces stipitatus ATCC 10500]
Length = 1100
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 109/195 (55%), Gaps = 20/195 (10%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLF--YKYGPIAHIDLKIPPRPPGYAFVEFEEARDA 58
MS +S LY+GNLP ++ ++++E+ F + G I I L G+ F+E+E+A DA
Sbjct: 796 MSEVSSTRLYLGNLPRNVTKKDIEEYFGSHGTGKITEIKLMN-----GFGFIEYEDAMDA 850
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSS----SDRHSSHSSGRGRGVSRRSEYRVLVT 114
D + G DF G RL V+ A G R + + SDR ++ RR+ +R+ V+
Sbjct: 851 RDVVPAFHGSDFKGERLTVQFARGPRHKETFNGPSDRPAAPR-------PRRTVFRMQVS 903
Query: 115 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GLP+ SWQDLKD R++G DV +S+ R+ G G V++ ++ D+K A++KLD E +
Sbjct: 904 GLPTETSWQDLKDFARQSGLDVVYSETTRERDG-RGFVEFESHADLKTAVEKLDGRELKG 962
Query: 174 AFSRAYVRVREYDHR 188
+ V+ + R
Sbjct: 963 SQVTCVADVQPAEER 977
>gi|294950021|ref|XP_002786421.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
gi|239900713|gb|EER18217.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
Length = 317
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 136/293 (46%), Gaps = 74/293 (25%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPP------RPPGYAFVEFEEARDAEDAI 62
+ V N+P ++RERE++D+FYK+G I I+++ R YA+V+F + +DA DA
Sbjct: 4 IVVSNIPSNLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAA 63
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR--------------------- 101
+ R+GY+ DG + VE+ R D ++ G+G+
Sbjct: 64 KSRNGYEIDGQPITVEVDSDSR----DDSRGPYAKGKGKGGRYDDYGGGYGKGGSGSPLG 119
Query: 102 -----GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNY 156
G+S + YRV+VT LP ASWQDLKD MR AG+ F++V RDG G G +
Sbjct: 120 FYDSMGMSE-NYYRVVVTNLPRGASWQDLKDRMRDAGECRFTEVTRDGVGVAG---FAGQ 175
Query: 157 DDMKHAIKKLDDSEFRNAFS-RAYVRVREYDHRRDGSQ---------------------- 193
D++ A++ LDD+E ++ F + +RV E++ + G
Sbjct: 176 SDVERAVRTLDDTEMKSHFGDTSIIRVEEFNEEKHGETLGHIGKGKGKGKGKGYGWGGGK 235
Query: 194 ------SPSRGRSYSRGRS----ESRSRSRSRGRSYSRSRSQSKSPKAKSSRR 236
+ S+ G+ S SRG SY S +SP+ + SRR
Sbjct: 236 GGGWGGKGAGYSSWGSGKGGYGDWGASSPPSRG-SYDDPYSGGRSPRGRDSRR 287
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 21/177 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRS-------------SSDRHSSHSSGRGRGVSRRSEYRVLVT 114
+ G R+ VE A G RG + R++ SS R G R+EYR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSR-YGPPLRTEYRLIVE 119
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+E
Sbjct: 120 NLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDTEL 175
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 12/177 (6%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S+ LYVGNL + ++ LF ++G I I +K + YAFVEF + +A++A
Sbjct: 2 SKRLYVGNLEYGVENDDLSKLFGQFGEITDIAIKDRGQGAVYAFVEFSKEEEADNAQSSL 61
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
+ F G +RVE G R+S+ S R RG RR++YR+ VT LP + SWQDL
Sbjct: 62 NSTHFMGRDIRVEYTRGL-------RYSTGDSIR-RGPPRRTDYRIEVTHLPHNCSWQDL 113
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
KD+M R G V + + R G G+V++ +Y+DMK A++KLDD++ + Y+ V
Sbjct: 114 KDYMSRIGPVGYCDI-RHG---YGVVEFIHYEDMKRAVRKLDDTKMYSNGESNYIHV 166
>gi|341881506|gb|EGT37441.1| hypothetical protein CAEBREN_07353 [Caenorhabditis brenneri]
Length = 401
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 98/170 (57%), Gaps = 11/170 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP D+ + +V F +G + ++D K + AFV + + R+A+DA+ +
Sbjct: 8 VYVGNLPLDVTKEQVGQFFSNWGEVTYVDFK-QTKTGRCAFVGYYDRREAQDAVMMMNSA 66
Query: 69 DFDGHRLRVELAHG--GRGRSSSDRHSSHSSGR-----GRGVSRRSEYRVLVTGLPSSAS 121
F G RLRVE +G RGR+ S +S+ R G+G+ RR+++RV V G+P + S
Sbjct: 67 VFHGRRLRVEFPNGLGPRGRNGQPMSSMNSNARIRRPPGQGIQRRTDFRVQVRGIPETGS 126
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQD+KDH+R AG+V F+ + G GIV++ ++ I+ + +F
Sbjct: 127 WQDIKDHVRAAGEVVFADIRGHG---IGIVEFEEEGSVRKCIEMFHNQDF 173
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 25/182 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRSS------------------SDRHSSHSSGRGRGVSRRSEY 109
+ G R+ VE A G RG + ++++ + S G R+EY
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEY 120
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R++V L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDT 179
Query: 170 EF 171
E
Sbjct: 180 EL 181
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 21/177 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRS-------------SSDRHSSHSSGRGRGVSRRSEYRVLVT 114
+ G R+ VE A G RG + R++ SS R G R+EYR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSR-YGPPLRTEYRLIVE 119
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+E
Sbjct: 120 NLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDTEL 175
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus caballus]
Length = 497
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 23/159 (14%)
Query: 24 EDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGG 83
+D YG I +DLK GY FVEF++ RDA+DA+ +G D G R+ VE A G
Sbjct: 15 QDNTMGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGP 69
Query: 84 RGRSSSDRHSSHSSGR--------GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRA 132
R R S+ SGR GR G R+EYR++V L S SWQDLKD+MR+A
Sbjct: 70 R------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQA 123
Query: 133 GDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
G+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 124 GEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 161
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 43/204 (21%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS+R ++VG L +RER++E F KYG I + +K G+AFVEF++ RDA+D
Sbjct: 1 MSTR----VFVGGLTYRVRERDLEKFFRKYGRIKEVAMK-----NGFAFVEFDDYRDADD 51
Query: 61 AIRGRDGYDFDGHRLRVELA---------------HGGRG---RSSSD--RHSSHSSGRG 100
A+ +G + G R+ VE A GG G RS+ D RH S R
Sbjct: 52 AVYELNGKELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRN 111
Query: 101 R-------------GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGT 147
G R+EYR+ V L S SWQDLKD+MR+AG+V ++ +
Sbjct: 112 TRTTSSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRN 170
Query: 148 TGIVDYTNYDDMKHAIKKLDDSEF 171
G+V++ Y D+K+AI+KLDD+E
Sbjct: 171 EGVVEFATYSDLKNAIEKLDDTEL 194
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 100/178 (56%), Gaps = 22/178 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRS--------------SSDRHSSHSSGRGRGVSRRSEYRVLV 113
+ G R+ VE A G RG + R++ SS R G R+EYR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKSSSR-YGPPLRTEYRLIV 119
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+E
Sbjct: 120 ENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDTEL 176
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 21/177 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRS-------------SSDRHSSHSSGRGRGVSRRSEYRVLVT 114
+ G R+ VE A G RG + R++ SS R G R+EYR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSR-YGPPLRTEYRLIVE 119
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+E
Sbjct: 120 NLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDTEL 175
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 24/181 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRSS-----------------SDRHSSHSSGRGRGVSRRSEYR 110
+ G R+ VE A G RG + +D++ + S G R+EYR
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEYR 120
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
++V L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD++
Sbjct: 121 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR-NEGVVEFASLSDMKTAIEKLDDTD 179
Query: 171 F 171
Sbjct: 180 L 180
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 98/174 (56%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F +G I I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG---GRGRSSSDRHSSHSSGRGR--------GVSRRSEYRVLVTGLP 117
+ G R+ VE A G R DR+ GR R G R+EYR++V L
Sbjct: 61 ELLGERVVVEPARGIDRSADRYRRDRYYERDRGRSRYDDYNYRYGPPTRTEYRLIVENLS 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD+MR+AG+V ++ + G+V++ + DM+ AI+KLD +E
Sbjct: 121 SRISWQDLKDYMRQAGEVTYADAHKQHR-NEGVVEFATHSDMRAAIEKLDGTEL 173
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 19/176 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + IDLK GY FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLMEIDLKN-----GYGFVEFEDNRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR------------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTG 115
+ G R+ VE A G R G SS +S +GR + G R+EYR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDFYGGGYGGGGRSSSYNSRSRTGRDKYGPPVRTEYRLVVEN 118
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD ++
Sbjct: 119 LSSRCSWQDLKDFMRQAGEVTYADAHKEHTN-EGVIEFRSYSDMKRALDKLDGTDI 173
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 99/182 (54%), Gaps = 25/182 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRG------------------RSSSDRHSSHSSGRGRGVSRRSEY 109
+ G R+ VE A G RG +D++ + S G R+EY
Sbjct: 61 ELLGERVVVEPARGTARGSHRDRYGDDRYGGRRGGGGRYNDKNKNSRSSSRYGPPLRTEY 120
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R++V L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+
Sbjct: 121 RLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRR-NEGVVEFASLSDMKTAIEKLDDT 179
Query: 170 EF 171
+
Sbjct: 180 DL 181
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 95/174 (54%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRSSSDRHSSHSSGRGR----------GVSRRSEYRVLVTGLP 117
+ G R+ VE A G RG S + R G R+EYR++V L
Sbjct: 61 ELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKNSSRYGPPLRTEYRLVVENLS 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+ SWQDLKD+MR+AG+V ++ + G+V++ DMK AI+KLDD+E
Sbjct: 121 TRVSWQDLKDYMRQAGEVTYADAHKQ-RKNEGVVEFATLSDMKTAIEKLDDTEL 173
>gi|67537616|ref|XP_662582.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|40741866|gb|EAA61056.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|259482149|tpe|CBF76354.1| TPA: pre-RNA splicing factor Srp2, putative (AFU_orthologue;
AFUA_3G10100) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 125/234 (53%), Gaps = 17/234 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ ++++E+ F +G I I L G+ F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGTGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + G DF G RL V+ A G R + + + + RR+ +R++++GLP
Sbjct: 56 RDIVPAFHGSDFKGERLTVQFARGPRRKENFPVPTDRPN---LPRPRRTIFRMIISGLPE 112
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
+ SWQDLKD R++G DV +S+ R+ GIV++ +D+K A++KLD EF+
Sbjct: 113 T-SWQDLKDFARQSGLDVVYSETGREPG--RGIVEFETANDLKTAVEKLDGREFKGTRVT 169
Query: 178 AYVRVREYDHR--RDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP 229
++ YD R RD +S S R Y R S RG S RS + +SP
Sbjct: 170 CVPDIQPYDDRPYRDPYRSRSPRRGYPPMDEYDRRYSVPRGYS-PRSHYRERSP 222
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 96/182 (52%), Gaps = 25/182 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L RER+VE F +G I I+LK G+ FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRSS------------------SDRHSSHSSGRGRGVSRRSEY 109
+ G R+ +E A G RGR S + G R+E+
Sbjct: 61 ELVGERVIIEHARGPARGRDEYRFGGEGGGGGGGRGRDGGGGGGGSRSSQRYGPPVRTEF 120
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R++V L S SWQDLKD+MR+AG+V F+ + GIV++ Y DMK+A++KLD +
Sbjct: 121 RIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHK-NEGIVEFATYSDMKNAVEKLDGT 179
Query: 170 EF 171
E
Sbjct: 180 EI 181
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 21/177 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRGRS-------------SSDRHSSHSSGRGRGVSRRSEYRVLVT 114
+ G R+ VE A G RG + R++ SS R G R+EYR++V
Sbjct: 61 ELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGRYNDKSSSR-YGPPLRTEYRLIVE 119
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+MR+AG+V ++ + G+V++ + DMK AI+KLDD+E
Sbjct: 120 NLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFASLSDMKTAIEKLDDTEL 175
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 99/175 (56%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +DLK GY FV+FE++RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGRLLEVDLK-----NGYGFVKFEDSRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR-----------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGL 116
D G R+ VE A G R S SGR + G R+E+R++V L
Sbjct: 59 DLCGERVIVEHARGPRRDRDGYSYSSRSGGGGGYSSRRQSGRDKYGPPVRTEHRLIVENL 118
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 119 SSRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 172
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 23/180 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE++VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVE-------LAHGGRGRSSSDRHSSHSS---GRGR-------GVSRRSEYRV 111
+ G R+ VE G G + D+ SS SS G GR G R++YR+
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRNLDQESSRSSKNGGYGRWGGRDRYGPPVRTDYRL 118
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+V L S SWQDLKD+MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 119 IVENLSSRCSWQDLKDYMRQAGEVTYADTHK-GRRNEGVIEFRQYSDMKRALEKLDGTEV 177
>gi|154284490|ref|XP_001543040.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406681|gb|EDN02222.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 300
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 18/178 (10%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKY---GPIAHIDLKIPPRPPGYAFVEFEEARD 57
M+ +S LY+GNLP ++ ++E+ED F + G I I L G+ F+E+E+A D
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
A+D + DG DF G RL V+ A G R + + S SS RR+ YR+ ++GLP
Sbjct: 56 AKDVV--PDGTDFKGERLTVQFARGPRHKETFSGPSDRSSA---PRPRRTIYRMQISGLP 110
Query: 118 SSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
+ SWQDLKD R++G DV +S+ DG G V++ D+K A++KLD EF+ +
Sbjct: 111 ET-SWQDLKDFARQSGLDVVYSEAGHDGR---GFVEFETGSDLKTAVEKLDGREFKGS 164
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 94/161 (58%), Gaps = 12/161 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG L D+RER++E F YG I I LK G+ FV+ + RDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 DFDGHRLRVELAHGGR-GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
G R+ VELA G R G DR R G R+ Y++LV L +S SWQDLKD
Sbjct: 60 RLMGERVTVELARGMRRGPPDYDRGP-----RRFGPPTRTNYQLLVENLSTSVSWQDLKD 114
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDD 168
MR+AGDV ++ + G+V++ +Y DMK+A++ LD+
Sbjct: 115 FMRQAGDVTYTDAHK-LRRHQGVVEFASYSDMKNALRSLDN 154
>gi|239606902|gb|EEQ83889.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis ER-3]
gi|327351368|gb|EGE80225.1| RNA recognition domain-containing protein containing protein
[Ajellomyces dermatitidis ATCC 18188]
Length = 299
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 20/207 (9%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKY---GPIAHIDLKIPPRPPGYAFVEFEEARD 57
M+ +S LY+GNLP ++ ++E+ED F + G I I L G+ F+E+E+A D
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
A+D + DG DF G RL V+ A G R + + S SS RR+ YR+ ++GLP
Sbjct: 56 AKDVV--PDGTDFKGERLTVQFARGPRHKETFSGPSDRSSA---PRPRRTIYRMQISGLP 110
Query: 118 SSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
+ SWQDLKD R++G DV +S+ DG G V++ D+K A++KLD EF+ +
Sbjct: 111 ET-SWQDLKDFARQSGLDVVYSETGHDGR---GFVEFETGSDLKTAVEKLDGREFKGSRV 166
Query: 177 RAYVRVREYDHRRDGSQSPSRGRSYSR 203
++ + R+ S+ P R RS R
Sbjct: 167 LCTQDIQSLEDRQ--SRDPYRSRSPGR 191
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 96/181 (53%), Gaps = 24/181 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L +RER++E F YG I + LK GY FVEF++ RDA+DA+ +G
Sbjct: 5 IYVGRLSYSVRERDIERFFRNYGRIVDVLLK-----NGYGFVEFDDYRDADDAVYELNGK 59
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSS------------------HSSGRGRGVSRRSEYR 110
+ G R+ +E A G + D SG G R+EYR
Sbjct: 60 ELCGERVVIEHARGPNRKDDRDGGYRDRGDRGGGRGGGRQPGWMDKSGSRYGPPARTEYR 119
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
++V L S SWQDLKD+MR+AG+V ++ + GIV++++ DMK A++KLDD+E
Sbjct: 120 LVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHK-NEGIVEFSSRADMKTALEKLDDTE 178
Query: 171 F 171
Sbjct: 179 I 179
>gi|226288775|gb|EEH44287.1| hypothetical protein PADG_00576 [Paracoccidioides brasiliensis
Pb18]
Length = 303
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 102/178 (57%), Gaps = 18/178 (10%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKY---GPIAHIDLKIPPRPPGYAFVEFEEARD 57
MS +S LY+GNLP ++ ++E+ED F + G I I L G+ F+E+E+A D
Sbjct: 1 MSEVSSTRLYLGNLPRNVTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMD 55
Query: 58 AEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
A+D + DG DF G RL V+ A G R + + SS RR+ YR+ ++GLP
Sbjct: 56 AKDVV--PDGTDFKGERLTVQFARGPRHKETFSGPPDRSSA---PRPRRTIYRMQISGLP 110
Query: 118 SSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
+ SWQDLKD R++G DV +S+ DG G V++ D+K A++KLD EF+ +
Sbjct: 111 ET-SWQDLKDFARQSGLDVVYSETGHDGR---GFVEFETGSDLKTAVEKLDGREFKGS 164
>gi|336465804|gb|EGO53969.1| hypothetical protein NEUTE1DRAFT_118022 [Neurospora tetrasperma
FGSC 2508]
gi|350287365|gb|EGZ68612.1| hypothetical protein NEUTE2DRAFT_146011 [Neurospora tetrasperma
FGSC 2509]
Length = 315
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + G DF G RL V+ A G R R + + + R RR+ +R+ ++GLP+
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGARHREGGPGFTHERNSQPR--PRRTPHRMQISGLPN 113
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR----N 173
SWQDLKD R++G DV +S+ R+ +G G V++ N D++ A++KLD+ EF+
Sbjct: 114 ETSWQDLKDFARQSGLDVVYSETTRNQNG-EGFVEFENAADLRTAVEKLDNREFKGQRVT 172
Query: 174 AFSRAYVRVREYDHRRDGSQSPSRGRSYS 202
+ + DHR S+SP RGR Y
Sbjct: 173 CVANTQPDIPRNDHRAR-SRSP-RGRPYP 199
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Metaseiulus
occidentalis]
Length = 303
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 91/167 (54%), Gaps = 10/167 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LYVG L RER++E LF YG I I LK G+AFVEFE+ RDAEDA +G
Sbjct: 9 LYVGRLSHRTRERDLERLFSPYGRIREILLK-----SGFAFVEFEDTRDAEDACYELNGK 63
Query: 69 DFDGHRLRVELAHGG-RGRSSSDRHSSHSSGR--GRGVSRRSEYRVLVTGLPSSASWQDL 125
D G R+ VE+A G RGR G G +R++YRV+V L + SWQDL
Sbjct: 64 DLLGDRIVVEMAKGTERGRGGLPMRGQRDKGWMDKYGPFKRTDYRVIVGNLSTRVSWQDL 123
Query: 126 KDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
KD MR+ G +VC++ + ++++ DMK AI+K D E
Sbjct: 124 KDMMRKVGCEVCYADAHKH-RKNEAVIEFATRSDMKRAIQKYDGHEV 169
>gi|326482144|gb|EGE06154.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 304
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 104/177 (58%), Gaps = 14/177 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLF--YKYGPIAHIDLKIPPRPPGYAFVEFEEARDA 58
MS +S LY+GNLP ++ ++++E+ F + G I I L G+ F+E+E+A DA
Sbjct: 1 MSEVSSTRLYLGNLPRNVNKQDIEEHFGSHGTGKITEIKLMQ-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
+D + G DF G RL V+ A G R R S+ RR+ YR+ +TGLP
Sbjct: 56 KDVVPAFHGTDFKGERLTVQFARGPRRREPFPGPPERSAAP---RPRRTIYRMQITGLPE 112
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
+ SWQDLKD R++G DV +S+ RD G G V++ N +D++ A++KLD ++F+ +
Sbjct: 113 T-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAVEKLDGTDFKGS 166
>gi|336266018|ref|XP_003347779.1| hypothetical protein SMAC_03877 [Sordaria macrospora k-hell]
gi|380091314|emb|CCC11171.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + G DF G RL V+ A G R R + + + R RR+ +R+ ++GLP+
Sbjct: 56 RDVVPAFHGSDFMGERLTVQFARGARHREGGPGFTHERNSQPR--PRRTPHRMQISGLPN 113
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR----N 173
SWQDLKD R++G DV +S+ R+ +G G V++ N D++ A++KLD+ EF+
Sbjct: 114 ETSWQDLKDFARQSGLDVVYSETTRNQNG-EGFVEFENAADLRTAVEKLDNREFKGQRVT 172
Query: 174 AFSRAYVRVREYDHRRDGSQSPSRGRSYS 202
+ + DHR S+SP RGR Y
Sbjct: 173 CVANTQPDIPRNDHRAR-SRSP-RGRPYP 199
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 14/171 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LY+GN+ D RER+VE F YG + + LK GY FVEFE+ RDA+DA++ DG
Sbjct: 8 LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVS--------RRSEYRVLVTGLPSSA 120
D +G R+RVE A R + +S S S RGR RR++YR+ V L +
Sbjct: 63 DMNGSRVRVEFARSPREKRNSRYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLSTRT 122
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD+ R G++ ++ + G+V++ + M++A+ +LDD++
Sbjct: 123 SWQDLKDYFRSCGEITYTNAHK-PRNNEGVVEFGDKRAMENALDRLDDTDL 172
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 23/163 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +DLK GY FVEFE+ RDA+DA+ Y
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDLK-----NGYGFVEFEDTRDADDAV-----Y 53
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+ +G L + R R+ D++ G R+EYR++V L S SWQDLKD
Sbjct: 54 ELNGKEL---CGYSSRSRTGRDKY---------GPPVRTEYRLIVENLSSRCSWQDLKDF 101
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
MR+AG+V ++ ++ G++++ +Y DM+ A++KLD ++
Sbjct: 102 MRQAGEVTYADAHKE-RANEGVIEFRSYSDMRRALEKLDGTDI 143
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2 [Oreochromis
niloticus]
Length = 386
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE++VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+ G R+ VE G R G R++YR++V L S SWQDLKD+
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYGGGGGGGGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDY 118
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 119 MRQAGEVTYADTHK-GRKNEGVIEFRLYSDMKRALEKLDGTEV 160
>gi|116202487|ref|XP_001227055.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
gi|88177646|gb|EAQ85114.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
Length = 324
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 24/186 (12%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSD---------RHSSHSSGRGRGVSRRSEY 109
D + DG DF G RL V+ A G R R H +S+ R RR+ +
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGSRHREQGGGGGGGGGGYNHDRNSAPR----PRRTPH 109
Query: 110 RVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDD 168
R+ ++GLP+ SWQDLKD R++G DV +S+ R+GS G V++ D++ A++KLD+
Sbjct: 110 RMQISGLPNDTSWQDLKDFARQSGLDVVYSETNRNGS-NEGFVEFETAADLRSAVEKLDN 168
Query: 169 SEFRNA 174
EF+NA
Sbjct: 169 REFKNA 174
>gi|346977018|gb|EGY20470.1| pre-mRNA splicing factor [Verticillium dahliae VdLs.17]
Length = 322
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 106/180 (58%), Gaps = 15/180 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP ++ + EVE F +G ++K+ G+ F+E+++A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKAEVEGHFATHGTGEITEIKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSS-------DRHSSHSSGRGRGVSRRSEYRVLV 113
+ DG DF G RL V+ A G R R + +++H+ R RR+++R+ +
Sbjct: 58 VVP--DGSDFMGERLTVQFARGTRHRDGGAAPGGFNNNNNTHNE-RAAPRPRRTQHRMQI 114
Query: 114 TGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
TGLP+ SWQDLKD R++ DV +S+ RDG+G G V++ D++ A++KLD EF+
Sbjct: 115 TGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNG-RGFVEFETAADLRTAVEKLDGREFK 173
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4 [Oryzias
latipes]
Length = 344
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 92/163 (56%), Gaps = 25/163 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE++VE F YG I +DLK GY FVEF++ RDA+DA+ Y
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLKN-----GYGFVEFDDPRDADDAV-----Y 53
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D +G L GGR DR+ G R++YR++V L S SWQDLKD+
Sbjct: 54 DLNGKELCGYGRWGGR-----DRY---------GPPVRTDYRLIVENLSSRCSWQDLKDY 99
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 100 MRQAGEVTYADTHK-GRRNEGVIEFRQYSDMKRALEKLDGTEV 141
>gi|296412014|ref|XP_002835723.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629512|emb|CAZ79880.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 103/176 (58%), Gaps = 11/176 (6%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
M++ S T LY+GNL D R++EVED F ++G +++K+ G+ F++++ DA+
Sbjct: 1 MANEYSGTRLYLGNLHKDARKQEVEDFFKEHGSGNVVEIKLMN---GFGFIQYDSEADAK 57
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV--SRRSEYRVLVTGLP 117
D + G DF G L V+ A G R + RH G R RR+ +R+ ++GL
Sbjct: 58 DVVPAYHGRDFKGQPLTVQFARGSR---HNPRHHDFPGGADRTFPRPRRTAFRMNISGLN 114
Query: 118 SSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKD R++G DV FS+V R+ G G+V++ +DD++ A+ LD +EF+
Sbjct: 115 PDTSWQDLKDFARKSGSDVVFSEVTRERDG-RGMVEFETHDDLRRAVAFLDRTEFK 169
>gi|85096852|ref|XP_960334.1| hypothetical protein NCU07069 [Neurospora crassa OR74A]
gi|28921822|gb|EAA31098.1| predicted protein [Neurospora crassa OR74A]
Length = 313
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 19/209 (9%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + DG DF G RL V+ A G R R + + + R RR+ +R+ ++GLP+
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGARHREGGPGFTHERNSQPR--PRRTPHRMQISGLPN 111
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR----N 173
SWQDLKD R++G DV +S+ R+ +G G V++ N D++ A++KLD+ EF+
Sbjct: 112 ETSWQDLKDFARQSGLDVVYSETTRNQNG-EGFVEFENAADLRTAVEKLDNREFKGQRVT 170
Query: 174 AFSRAYVRVREYDHRRDGSQSPSRGRSYS 202
+ + DHR S+SP RGR Y
Sbjct: 171 CVANTQPDIPRNDHRAR-SRSP-RGRPYP 197
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 97/166 (58%), Gaps = 9/166 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG+L RER+VE F YG I I LK G+ FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSS-SDRHSSHSSGRGR--GVSRRSEYRVLVTGLPSSASWQDL 125
+ R+ +E A RGR S R S + S G G R+E+R++V L S SWQDL
Sbjct: 61 ELCDERVTIEHARARRGRGRFSQRFSYYPSQSGSRYGPPIRTEHRIIVENLSSRISWQDL 120
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
KD MR+AG+V + R+ G+V++ +Y DMK A++KLD +E
Sbjct: 121 KDVMRKAGEVTYVDAHRNNR-NEGVVEFASYSDMKSALEKLDGTEL 165
>gi|347441498|emb|CCD34419.1| hypothetical protein [Botryotinia fuckeliana]
Length = 324
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + +VE F +G ++K+ G+ F+E+++A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRSATKADVEAHFNTHGTGEITEIKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G DF G RL V+ A G R R + + ++ R RR+ +R+ ++GLP
Sbjct: 58 VVPAFHGSDFMGERLTVQFARGTRNRDTFANNPERTAPR----PRRTPHRMQISGLPGET 113
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++ DV +S+ RD G V++ D+K A++KLD EF+ A
Sbjct: 114 SWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGA 168
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 18/174 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKN-----GYGFVEFEDSRDADDAVYEPNA- 57
Query: 69 DFDGHRLRVELAHGGRGR----SSSDRH------SSHSSGRGR-GVSRRSEYRVLVTGLP 117
G R+ VE A G SS D+ S +SGR + G R+E+R++V L
Sbjct: 58 KLCGERVIVEHARGPXXXXXXFSSHDKGGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 117
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 118 SRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 170
>gi|452989025|gb|EME88780.1| hypothetical protein MYCFIDRAFT_209897, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 209
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LY+GNLP + + +VE+ F +G ++K+ G+ F+E+++A DA D + G
Sbjct: 22 LYLGNLPRNATKADVENHFNTHGTGEITEIKLMN---GFGFIEYKDAMDARDVVPAFHGS 78
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+F G RL V+ A G S+ R R RR+ +R+ +TGLP SWQDLKD
Sbjct: 79 EFMGERLVVQFARG----STRPREGFEHQPRMAPRPRRTIHRMTITGLPFETSWQDLKDF 134
Query: 129 MRRAG-DVCFSQVF--RDGSGT-TGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
R++G DV +S+V RD SGT G V+Y D+ A++KLD+SEF+ + R
Sbjct: 135 ARQSGLDVVYSEVNRERDPSGTGKGFVEYETAADLASAVEKLDNSEFKGSTVRC 188
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta CCMP2712]
Length = 258
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 90/163 (55%), Gaps = 20/163 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L +RER+++D F ++G I I LK G+AFVE++ + DAE A+R DG
Sbjct: 7 VYVGHLSSRVRERDLDDEFSRFGKIRDISLK-----QGFAFVEYDHSEDAEYAVRKMDGV 61
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+ +G R+ VE A + + R SG YR+ L + SWQDLKD
Sbjct: 62 NLEGMRILVEFA-----KETPKRGPRGGSG----------YRIYAENLSQNTSWQDLKDF 106
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
R+AG V ++ VF + G+++Y +DM+ A+ KLD +E
Sbjct: 107 ARKAGKVIYTDVFSERGEKLGVIEYATREDMEDALYKLDGTEL 149
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 25/206 (12%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
+S+ +Y+G +P D ++++E F YG I I + G+ FVEFE +DAED +
Sbjct: 2 SSKRIYIGKMPRDAMKQDIEKFFEGYGRIQDIRIMN-----GFGFVEFENPKDAEDVVAN 56
Query: 65 RDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
G + G + +ELA S +R R +RR YRVL+ G+ SWQD
Sbjct: 57 FQGKNLLGEPIIIELAK----ESRRERGGGFEERGPRPFTRRPGYRVLIHGVSRDTSWQD 112
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA------ 178
LKD R AG V FS + R+ G GI++Y DD+++A++ L++ E R R
Sbjct: 113 LKDFGREAGAVTFSDLDRENPG-EGILEYLTPDDLENALRLLNNRELRGVTVRVSRGEGG 171
Query: 179 -------YVRVREYDHRRDGSQSPSR 197
Y R +E+ RRD S+SP R
Sbjct: 172 LGGSGVDYSRDKEF--RRDRSRSPGR 195
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 95/181 (52%), Gaps = 25/181 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA+ +G
Sbjct: 6 VYVGGLPYGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHG-GRG-----------------RSSSDRHSSHSSGRGRGVSRRSEYR 110
+ G R+ VE A G RG +S R G R+EYR
Sbjct: 61 ELLGERVVVEPARGTARGPGGRREYDRGGDRYGDRGRGGGGRYDKNSSR-YGPPLRTEYR 119
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
++V L S SWQDLKD+MR+AG+V ++ + G+V++ DMK AI+KLDD+E
Sbjct: 120 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RKNEGVVEFATSSDMKTAIEKLDDTE 178
Query: 171 F 171
Sbjct: 179 L 179
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Taeniopygia
guttata]
Length = 277
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 96/172 (55%), Gaps = 20/172 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG+L RER+VE F YG I I LK G+ FVEFE+ RDA+DAI Y
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAI-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS---SDRHSSHSSGRGR---GVSRRSEYRVLVTGLPSS 119
+ +G L RV + H R S R S + S G G R+E+R++V L S
Sbjct: 56 ELNGKELCDERVTIEHARARRGRGRFSQRFSYYQSTSGSSRYGPPVRTEHRIIVENLSSR 115
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD MR+AG+V + R+ G+V++ +Y DMK A++KLD +E
Sbjct: 116 ISWQDLKDVMRKAGEVTYVDAHRNNR-NEGVVEFASYSDMKSALEKLDGTEL 166
>gi|154304025|ref|XP_001552418.1| pre-mRNA splicing factor [Botryotinia fuckeliana B05.10]
Length = 308
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + +VE F +G ++K+ G+ F+E+++A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRSATKADVEAHFNTHGTGEITEIKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G DF G RL V+ A G R R + + ++ R RR+ +R+ ++GLP
Sbjct: 58 VVPAFHGSDFMGERLTVQFARGTRNRDTFANNPERTAPR----PRRTPHRMQISGLPGET 113
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++ DV +S+ RD G V++ D+K A++KLD EF+ A
Sbjct: 114 SWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGA 168
>gi|401412768|ref|XP_003885831.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
gi|325120251|emb|CBZ55805.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
Length = 353
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 94/172 (54%), Gaps = 10/172 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI---RGR 65
+Y+G+LPG+ E++VE F K+G I ++ K GY F+E+ + RDA DAI GR
Sbjct: 17 IYIGSLPGEYTEKDVEREFEKFGKIVKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 66 DGYDF-DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
F D LRVE+ GR +D S + RG RR + + V GLP S SWQD
Sbjct: 77 PPPGFRDAAPLRVEIPLARSGR--TDGFSDDAMPRGL-AGRRGRFVLEVRGLPPSGSWQD 133
Query: 125 LKDHMRRAGDVCFSQVFRDGSG---TTGIVDYTNYDDMKHAIKKLDDSEFRN 173
LKDH R GDV F++V +D G V + + DM AI+ LD S FR+
Sbjct: 134 LKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEALDGSTFRS 185
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 27/179 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSS---------SDRHSSHSSGRGRGVSR-------RSEYRVL 112
+ R+ +E A SDR+ GRG SR R+E R++
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRRPGGGRFSDRY-----GRGSQSSRSRNPPPVRTENRLI 115
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
V L S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+A++KL E
Sbjct: 116 VENLSSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYSDLKNALEKLSGKEM 173
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1 [Oryzias
latipes]
Length = 367
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 102/178 (57%), Gaps = 21/178 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +D+K GY FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR--------------GRSSSDRHSSHSSGRGR-GVSRRSEYRVLV 113
+ G R+ VE A G R GRS++ S GR + G R+EYR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGSSWGGGRSNNSSSSRTRVGRDKYGPPVRTEYRLIV 118
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD ++
Sbjct: 119 ENLSSRCSWQDLKDFMRQAGEVTYADAHKERT-NQGVIEFRSYSDMKRALDKLDGTDI 175
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Amphimedon
queenslandica]
Length = 309
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 20/182 (10%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR SR +Y+G LP RE++VE F +G I I+LK G+ FVEF++ RDAEDA+
Sbjct: 2 SRYSR-IYIGRLPYQAREKDVERFFRGFGRIRDINLK-----NGFGFVEFDDYRDAEDAV 55
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHS----SGRGR---------GVSRRSEY 109
G + G R+ VE A G R R RGR G R+++
Sbjct: 56 YELHGRELLGERVIVEHARGNRDRDDYRDRRGGGRDFRQDRGRDGRSNASKYGPPLRTDF 115
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R+LV + S SWQDLKD MR AG++ ++ + +G GIV+Y Y+DMK+AI+KL+ +
Sbjct: 116 RILVENVSSRVSWQDLKDFMRTAGEITYADAHKQKTGE-GIVEYATYEDMKNAIRKLNGT 174
Query: 170 EF 171
+
Sbjct: 175 DL 176
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 34/191 (17%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L RER+VE F +G I I+LK G+ FVEFE+ RDA+DA+ +G
Sbjct: 44 VYVGRLSYQARERDVERFFRGFGRIREINLK-----NGFGFVEFEDYRDADDAVYELNGK 98
Query: 69 DFDGHRLRVELAHG-GRGRSS--------SDRHSSHSSGRGR------------------ 101
+ G R+ +E A G RGR D+ G G
Sbjct: 99 ELVGERVIIEHARGPARGRDEYRYGYRRRGDKFGGEGGGGGGGRGRDGGGGGGGSRSSQR 158
Query: 102 -GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMK 160
G R+E+R++V L S SWQDLKD+MR+AG+V F+ + GIV++ Y DMK
Sbjct: 159 YGPPVRTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHK-NEGIVEFATYSDMK 217
Query: 161 HAIKKLDDSEF 171
+A++KLD +E
Sbjct: 218 NAVEKLDGTEI 228
>gi|398406965|ref|XP_003854948.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
gi|339474832|gb|EGP89924.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
Length = 333
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 12/183 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ ++ LY+GNLP + + +VE+ F +G ++K+ G+ F+E+++A DA D
Sbjct: 1 MAEVSNTRLYLGNLPRNATKADVENHFNTHGTGEITEIKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G +F G RL V+ A G S+ R R RR+ +R+ +TGLP
Sbjct: 58 VVPAFHGSEFMGERLVVQFARG----SNRPRDGFEQQPRQAPRPRRTVHRMTITGLPFET 113
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRD----GSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAF 175
SWQDLKD R++G DV +S+V R+ G+G V+Y D+ A++KLD++EF+ A
Sbjct: 114 SWQDLKDFARQSGLDVVYSEVGRERDSSGTGKGSFVEYETAADLAAAVEKLDNNEFKGAT 173
Query: 176 SRA 178
R
Sbjct: 174 VRC 176
>gi|317143798|ref|XP_003189536.1| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
Length = 299
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 24/211 (11%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYG--PIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ ++++E+ F +G I I L G+ F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSS----SDRHSSHSSGRGRGVSRRSEYRVLVT 114
D + G DF G RL V+ A G R + + DR + RR+ YR++V+
Sbjct: 56 RDVVPAFHGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTVYRMMVS 108
Query: 115 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GLP + SWQDLKD R AG DV +S+ R+ G V++ +D+K AI+KLD +F+
Sbjct: 109 GLPET-SWQDLKDFARGAGLDVVYSETGREPG--RGFVEFETANDLKTAIEKLDGRDFKG 165
Query: 174 AFSRAYVRVREYDHR--RDGSQSPSRGRSYS 202
+ ++ D R RD +S S RSY
Sbjct: 166 SRVSCVADIQPVDERPFRDPYRSRSPRRSYP 196
>gi|393216709|gb|EJD02199.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 270
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 89/167 (53%), Gaps = 11/167 (6%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
+R LY+G LP D R EV F +GP+ + + G+ FVEFE +RDAEDA+R
Sbjct: 2 ARRLYLGKLPPDTRTDEVTKYFDGFGPLVDVRVMT-----GFGFVEFESSRDAEDALRDI 56
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
G F G + VE A RGR + S + R R + R+ V + SWQDL
Sbjct: 57 RGKPFLGSNIVVEFAKENRGRRNDYEDRSFAPRR-----RPAGIRISVDNISKDTSWQDL 111
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KD R AG V F+ + R+ G GI++Y + DD + A+K+LD E R
Sbjct: 112 KDFGREAGSVSFADIDREVPG-RGILEYASRDDAEQAVKELDGKELR 157
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 99/196 (50%), Gaps = 39/196 (19%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP RER++E F YG + +K GY FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 DFDGHRLRVELAHG---------------GRG---RSSSD--RHSSHSSGRGR------- 101
+ G R+ VE A G G G RS+ D RH S R
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 ------GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
G R+EYR+ V L S SWQDLKD+MR+AG+V ++ + G+V++
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFAT 232
Query: 156 YDDMKHAIKKLDDSEF 171
Y D+K+AI KLDD+E
Sbjct: 233 YSDLKNAIDKLDDTEL 248
>gi|198432077|ref|XP_002131581.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 332
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 29/188 (15%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VG L RE ++E F +G I I++K G+ FVEF+++RDA+DA+ +
Sbjct: 4 RRIFVGRLSYRAREGDIERFFKGFGRITDINIK-----NGFCFVEFDDSRDADDAVYEMN 58
Query: 67 GYDFDGHRLRVELAHGGR------------------GRSSSDRHSSHSSGRGRGVSR--- 105
G R+ VELA G + ++ G GR S+
Sbjct: 59 NQMLCGERVTVELAKGTQRWGQERRDYGGGRDYGRGDYGGGYGGRNNDRGFGRRQSKFAP 118
Query: 106 --RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAI 163
R+EYRV+V L + +WQ+LKDH+R+AG++ ++ + G+VD+ +YDDMK+AI
Sbjct: 119 PMRTEYRVIVENLSTRVAWQELKDHLRQAGEITYADAHK-HRRNEGVVDFASYDDMKNAI 177
Query: 164 KKLDDSEF 171
+K +++E
Sbjct: 178 EKFNNTEL 185
>gi|302690366|ref|XP_003034862.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
gi|300108558|gb|EFI99959.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
Length = 292
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 15/176 (8%)
Query: 1 MSSRAS--RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDA 58
MSS A+ R LY+G LP D +V+ F YG + +D ++ G+ F+E+E ++DA
Sbjct: 1 MSSSATMGRRLYLGKLPPDTAPEDVKKTFGAYGTV--VDCRVMT---GFGFIEYESSKDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR--SEYRVLVTGL 116
EDA+ +G F+G+ + VE A R + R + R G RR +RVLVTG+
Sbjct: 56 EDAVNEMNGKTFNGNSIAVEFA-----RENRPRREPYERDREYGAPRRRPGGFRVLVTGV 110
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKD R AG V F+ + RD G G+++Y + DD HA++ LD + R
Sbjct: 111 SRDTSWQDLKDFGREAGSVTFADIDRDVPG-QGVLEYMSRDDADHAVRYLDRRDLR 165
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 13/169 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK GY FVEFE++RDA+DA+ +
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKN-----GYGFVEFEDSRDADDAVYEPNA- 57
Query: 69 DFDGHRLRVELAHG-----GRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSASW 122
G R+ VE A G S +SGR + G R+E+R++V L S SW
Sbjct: 58 KLCGERVIVEHARGPSREGSYSSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSW 117
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
QDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 118 QDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 165
>gi|213401865|ref|XP_002171705.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
gi|211999752|gb|EEB05412.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
Length = 375
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L++G LP +VED F YG I L G+ F+E E RDA D + DG
Sbjct: 6 LFIGRLPSQAAREDVEDFFKGYGRILDCKLMN-----GFGFLELENPRDARDIVN--DGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+F G R+ VE A G R R + R + R RR+ YR++V L SWQDLKD
Sbjct: 59 EFMGERIIVEPARGERRRRDTFRDGAAKYPR----PRRTGYRLIVENLAEDVSWQDLKDV 114
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
MR+AG+ F+ R+ G TG+V+++ DDMKHA+ L+
Sbjct: 115 MRKAGEPTFTDAHREQRG-TGVVEFSTEDDMKHALDTLN 152
>gi|346326093|gb|EGX95689.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 332
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 18/179 (10%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
MS+ S T LY+GNLP + + ++E F +G ++K+ G+ F+E+++ DA
Sbjct: 1 MSNEVSNTRLYLGNLPPNATKADIEAHFATHGTGEITEVKLMH---GFGFIEYKDPMDAR 57
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGR-----GRSSSDRHSSHSSGRGRGVSRRSEYRVLVT 114
D + DG DF G RL V+ A G R G + H ++ R RR+ +R+ +T
Sbjct: 58 DVVP--DGSDFKGTRLTVQFARGPRPREPPGYGAGGAHHERAAPR----PRRTIHRMTIT 111
Query: 115 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
GLP+ SWQDLKD R+AG DV +S+ RD G V+Y N +D++ A++KLD EF+
Sbjct: 112 GLPNETSWQDLKDFARQAGPDVVYSETARDSG--RGFVEYENANDLRTAVEKLDGFEFK 168
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 95/179 (53%), Gaps = 14/179 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G LP D+RE +VE YG I I LK GY FVEF++ RDAEDA+ +G
Sbjct: 4 IFLGRLPRDVRESDVEKFLRGYGKIRDISLK-----RGYGFVEFDDHRDAEDAVHDLNGR 58
Query: 69 DFDGHRLRVELAHG----GRGRSSSDRHSSHSSGRGR----GVSRRSEYRVLVTGLPSSA 120
D G R+ VE + G G GR D GR G R+ Y V+V L S
Sbjct: 59 DLIGERVVVEFSKGRRSEGGGRDRRDFSGRGGRDGGRRPIYGPPVRTNYSVIVENLSSRT 118
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
SWQDLKD+ R+ G V ++ + G G+V++ + DD+ AI+KLDD+E R Y
Sbjct: 119 SWQDLKDYFRKYGKVTYADAHKKRIG-EGVVEFESKDDLNTAIEKLDDTELGGRRIRVY 176
>gi|156358473|ref|XP_001624543.1| predicted protein [Nematostella vectensis]
gi|156211330|gb|EDO32443.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR++R +Y G LP D RER++E YG + I +K+ GY FVEF++ RDA+D +
Sbjct: 2 SRSTR-VYFGRLPRDCRERDLEKFVRGYGRVREISMKL-----GYGFVEFDDYRDADDCV 55
Query: 63 RGRDGYDFDGHRLRVELAHG-----GRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
+G + G R+ VE + G S SS RGR R+E+R+ V L
Sbjct: 56 YDLNGRNLLGERVVVEHSRNPSRGSDYGYRRDSSSRSRSSRRGRTPPIRTEHRLAVENLS 115
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S ++WQDLK++M + G+V F+ + G G+V++ DDMK A+KKLDD+EF
Sbjct: 116 SRSNWQDLKEYMGKVGEVTFADAHKRRQG-EGVVEFATKDDMKTALKKLDDTEF 168
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 9/166 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG+L RER+VE F YG I I LK G+ FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR---GVSRRSEYRVLVTGLPSSASWQDL 125
+ R+ +E A RGR + S+ S G G R+E+R++V L S SWQDL
Sbjct: 61 ELCDERVTIEHARARRGRGRFAQRFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDL 120
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
KD MR+AG+V + R+ G+V++ +Y DMK A++KLD +E
Sbjct: 121 KDVMRKAGEVTYVDAHRNNR-NEGVVEFASYSDMKSALEKLDGTEL 165
>gi|238487096|ref|XP_002374786.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
gi|317143800|ref|XP_001819713.2| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
gi|220699665|gb|EED56004.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
Length = 300
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 24/211 (11%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYG--PIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ ++++E+ F +G I I L G+ F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSS----SDRHSSHSSGRGRGVSRRSEYRVLVT 114
D + G DF G RL V+ A G R + + DR + RR+ YR++V+
Sbjct: 56 RDVVPAFHGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTVYRMMVS 108
Query: 115 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GLP + SWQDLKD R AG DV +S+ R+ G V++ +D+K AI+KLD +F+
Sbjct: 109 GLPET-SWQDLKDFARGAGLDVVYSETGREPG--RGFVEFETANDLKTAIEKLDGRDFKG 165
Query: 174 AFSRAYVRVREYDHR--RDGSQSPSRGRSYS 202
+ ++ D R RD +S S RSY
Sbjct: 166 SRVSCVADIQPVDERPFRDPYRSRSPRRSYP 196
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1 [Oryzias
latipes]
Length = 372
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 94/168 (55%), Gaps = 11/168 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE++VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR-----RSEYRVLVTGLPSSASWQ 123
+ G R+ VE G R GR G R R++YR++V L S SWQ
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQ 118
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
DLKD+MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADTHK-GRRNEGVIEFRQYSDMKRALEKLDGTEV 165
>gi|156356000|ref|XP_001623720.1| predicted protein [Nematostella vectensis]
gi|156210446|gb|EDO31620.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 12/167 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y G LP E+++E+L +G + +D K GYA+V F+E +DA+ A+ +
Sbjct: 5 VYCGRLPATATEKDLENLVKVFGKVREVDFK-----EGYAYVVFKENKDADRAVAALNNS 59
Query: 69 DFDGHRLRVELA----HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+F G ++ +E A +G G +++ +++ + R G RSE+RV+V L + A W +
Sbjct: 60 EFHGAKILMEKAKEMRNGVGGYTAAGGYTART--RQMGPPVRSEFRVIVENLSTRAKWLE 117
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
LK+ M AG+VC++ R G G+V++T +DMK AI LD EF
Sbjct: 118 LKEFMNNAGEVCYADTHRRRPG-EGVVEFTTEEDMKRAIASLDKCEF 163
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 61/81 (75%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 25 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 84
Query: 69 DFDGHRLRVELAHGGRGRSSS 89
D+DG+RLRVE GRG S
Sbjct: 85 DYDGYRLRVEFPRSGRGTGSG 105
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 94/167 (56%), Gaps = 11/167 (6%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
+R LY+G LP D+R EV F YG I +D ++ G+ FVEFE +RDAEDA++
Sbjct: 2 ARRLYLGRLPPDVRSEEVSKFFDGYGRI--VDCRVMT---GFGFVEFESSRDAEDAMQNF 56
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
+G +F G + VE A + + R + + R R +RV+V+G+ SWQDL
Sbjct: 57 NGKNFMGSNIVVEFA-----KETRPRRDPYDADRAVRARRPPGFRVIVSGISRDTSWQDL 111
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KD R AG V ++ + RD G GI++Y + +D + A+K LD + R
Sbjct: 112 KDFGREAGSVSYADIDRDNPG-EGILEYLSREDSERAVKDLDGRDLR 157
>gi|378727012|gb|EHY53471.1| hypothetical protein HMPREF1120_01663 [Exophiala dermatitidis
NIH/UT8656]
Length = 316
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 12/203 (5%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP +I +++++D F +G + ++K+ G+ F+E+E+ DA D
Sbjct: 1 MADVSSTRLYLGNLPRNITKQDIQDHFGTHGAGSIKEIKLMN---GFGFIEYEDPMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G +F G RL V+ A G R + + S + R RR+ YR+ +TGL
Sbjct: 58 VVPAFHGTEFKGERLTVQFARGPRRKDDFNGPSDRNIPR----PRRTIYRMQITGLQPDT 113
Query: 121 SWQDLKDHMRRAG--DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
SWQDLKD R +G DV +S+ R+ G G V++ D+K A++KLD F+ A
Sbjct: 114 SWQDLKDFARNSGQLDVVYSETGRERDG-KGFVEFETQADLKTAVEKLDGQTFKGATVHC 172
Query: 179 YVRVREY--DHRRDGSQSPSRGR 199
+++ D R +SP RGR
Sbjct: 173 VADIQDERPDMRSYRQRSPPRGR 195
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 13/180 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +++GNLP +RER++E F +YG + +I +K Y F EF++ RDA+D
Sbjct: 1 MPSREGSRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR--------RSEYRVL 112
A+ +G + +G R+ VE A GGR RGRGV R+ YRV+
Sbjct: 57 AVYKLNGGELNGERITVEHARGGRRAEGRGGGFRGDRNRGRGVGGRGKYGPPTRTNYRVI 116
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
V L S SWQDLKD MRRAG+V F+ D G+V++ + DM AI+K D+ E +
Sbjct: 117 VENLSSRVSWQDLKDVMRRAGEVTFADAHND-RRNEGVVEFISRRDMDRAIEKFDNHELQ 175
>gi|452839557|gb|EME41496.1| hypothetical protein DOTSEDRAFT_73793 [Dothistroma septosporum
NZE10]
Length = 327
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 11/174 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LY+GNLP + + +VE+ F +G +++K+ G+ F+E+++A DA D + G
Sbjct: 11 LYLGNLPRNATKADVENHFNTHGTGEIMEIKLMN---GFGFIEYKDAMDARDVVPAFHGS 67
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+F G RL V+ A G S+ R R RR+ +R+ +TGLP SWQDLKD
Sbjct: 68 EFMGERLVVQFARG----SNRPREGFEHQPRMAPRPRRTVHRMTITGLPFETSWQDLKDF 123
Query: 129 MRRAG-DVCFSQVF--RDGSGT-TGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
R++G DV +S+V RD SGT G V+Y D+ A++KLD+SEF+ + R
Sbjct: 124 ARQSGLDVVYSEVNRERDPSGTGKGYVEYETAADLATAVEKLDNSEFKGSNVRC 177
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 99/196 (50%), Gaps = 39/196 (19%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP RER++E F YG + +K GY FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 DFDGHRLRVELAHG---------------GRG---RSSSD--RHSSHSSGRGR------- 101
+ G R+ VE A G G G RS+ D RH S R
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 102 ------GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
G R+EYR+ V L S SWQDLKD+MR+AG+V ++ + G+V++
Sbjct: 174 QSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFAT 232
Query: 156 YDDMKHAIKKLDDSEF 171
Y D+K+AI KLDD+E
Sbjct: 233 YSDLKNAIDKLDDTEL 248
>gi|225712276|gb|ACO11984.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 329
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +++GNLP +RER++E F +YG + +I +K Y F EF++ RDA+D
Sbjct: 1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYDFDGHRLRVELAHGGR--------------GRSSSDRHSSHSSGRGRGVSRR 106
A+ +G + + R+ VE A GGR G G R
Sbjct: 57 AVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGYRGDRYRGRRGGRGKYGPPTR 116
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
+ YRV+V L + SWQDLKD MRRAG+V F+ D G+V++ + DM+ AI K
Sbjct: 117 TNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKR-NEGVVEFISRRDMERAIDKF 175
Query: 167 DDSEF 171
D+ E
Sbjct: 176 DNHEL 180
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 39/196 (19%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP RER++E F YG + +K GY FVEF++ RDA+DA+ +G
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAVYELNGK 113
Query: 69 DFDGHRLRVELA---------------HGGRG-------------RSSSDRHSSHSSGRG 100
+ G R+ VE A GG G R S +R++ +S
Sbjct: 114 ELLGERITVERARGTPRGSDQWRYGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYK 173
Query: 101 RGVSR-----RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
+ + R R+EYR++V L S SWQDLKD+MR AG+V ++ + G+V++
Sbjct: 174 QSLPRYGPPTRTEYRLIVENLSSRVSWQDLKDYMRHAGEVTYADAHKQ-RRNEGVVEFAT 232
Query: 156 YDDMKHAIKKLDDSEF 171
Y D+K+AI KLDD+E
Sbjct: 233 YSDLKNAIDKLDDTEL 248
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1 [Oreochromis
niloticus]
Length = 390
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE++VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR----GVSRRSEYRVLVTGLPSSASWQD 124
+ G R+ VE G R G G R++YR++V L S SWQD
Sbjct: 59 ELCGERVIVEHTRGPRRDGGYGGGGGGYGRWGGRDRYGPPIRTDYRLIVENLSSRCSWQD 118
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
LKD+MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 119 LKDYMRQAGEVTYADTHK-GRKNEGVIEFRLYSDMKRALEKLDGTEV 164
>gi|68066368|ref|XP_675167.1| pre-mRNA splicing factor [Plasmodium berghei strain ANKA]
gi|56494193|emb|CAH97347.1| pre-mRNA splicing factor, putative [Plasmodium berghei]
Length = 457
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 19/160 (11%)
Query: 30 YGPIAHIDLKIP--PRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHG----G 83
+G I +ID+K+ YAFV + + +DAE AI RDGY FDG RLRVE + G
Sbjct: 1 FGRIKYIDIKLTRGSTSTAYAFVHYYDIKDAEYAIERRDGYKFDGERLRVEFSGENKSFG 60
Query: 84 RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 143
+ R D G G R+E+R++V+ LP + WQ LKD MR+ GDV ++ +
Sbjct: 61 KYRRKED---------GIGPPLRTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANI--- 108
Query: 144 GSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
GIV++ + D M +AI+K D +EF+ ++VR
Sbjct: 109 -EHGKGIVEFVDRDGMLYAIEKFDRAEFKVHDQVTNIKVR 147
>gi|83767572|dbj|BAE57711.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867601|gb|EIT76847.1| alternative splicing factor SRp55/B52/SRp75 [Aspergillus oryzae
3.042]
Length = 298
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 115/211 (54%), Gaps = 26/211 (12%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKY--GPIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ ++++E+ F + G I I L G+ F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSS----SDRHSSHSSGRGRGVSRRSEYRVLVT 114
D + DG DF G RL V+ A G R + + DR + RR+ YR++V+
Sbjct: 56 RDVV--PDGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTVYRMMVS 106
Query: 115 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GLP + SWQDLKD R AG DV +S+ R+ G V++ +D+K AI+KLD +F+
Sbjct: 107 GLPET-SWQDLKDFARGAGLDVVYSETGREPG--RGFVEFETANDLKTAIEKLDGRDFKG 163
Query: 174 AFSRAYVRVREYDHR--RDGSQSPSRGRSYS 202
+ ++ D R RD +S S RSY
Sbjct: 164 SRVSCVADIQPVDERPFRDPYRSRSPRRSYP 194
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3 [Oryzias
latipes]
Length = 388
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 94/168 (55%), Gaps = 11/168 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE++VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYRAREKDVERFFKGYGKILEVDLK-----NGYGFVEFDDPRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR-----RSEYRVLVTGLPSSASWQ 123
+ G R+ VE G R GR G R R++YR++V L S SWQ
Sbjct: 59 ELCGERVIVEHTKGPRRDGGYGGGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQ 118
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
DLKD+MR+AG+V ++ + G G++++ Y DMK A++KLD +E
Sbjct: 119 DLKDYMRQAGEVTYADTHK-GRRNEGVIEFRQYSDMKRALEKLDGTEV 165
>gi|354472339|ref|XP_003498397.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cricetulus
griseus]
Length = 476
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 87/152 (57%), Gaps = 20/152 (13%)
Query: 31 GPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSD 90
G D+K P GY FVEF++ RDA+DA+ +G D G R+ VE A G R
Sbjct: 8 GNCQFADVKEPQ--AGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR------ 59
Query: 91 RHSSHSSGR--------GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 139
R S+ SGR GR G R+EYR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 60 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 119
Query: 140 VFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+ G G++++ +Y DMK A++KLD +E
Sbjct: 120 AHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 150
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 96/174 (55%), Gaps = 22/174 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG L RER+VE F YG I I+LK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFVGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFEDHRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSSSDRHS---SHSSGRGRGVSR-----RSEYRVLVTGLP 117
+ +G L RV + H R R+S S+ G G S+ R+E+R++V L
Sbjct: 56 ELNGKELCNERVTIEHARARRGGRGRYSQRFSYYQSYGGGSSQYGPPLRTEHRLIVENLS 115
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F R+ G+V++ + DMK A+ KLD SE
Sbjct: 116 SRVSWQDLKDFMRKAGEVTFVDAHRNNP-NEGVVEFASSSDMKSAMDKLDGSEL 168
>gi|171849000|pdb|3BEG|B Chain B, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 115
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 71/96 (73%), Gaps = 9/96 (9%)
Query: 104 SRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAI 163
SRRSE RV+V+GLP S SWQDLKDHMR AGDVC++ V+RDG TG+V++ +DM +A+
Sbjct: 12 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 68
Query: 164 KKLDDSEFR-NAFSRAYVRVREYDHRRDGSQSPSRG 198
+KLD+++FR + AY+RV+ DG +SPS G
Sbjct: 69 RKLDNTKFRSHEGETAYIRVKV-----DGPRSPSYG 99
>gi|302894677|ref|XP_003046219.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
gi|256727146|gb|EEU40506.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 15/183 (8%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
M++ S T LY+GNLP + + +VE F +G ++K+ G+ F+E+++ DA+
Sbjct: 1 MTTEVSSTRLYLGNLPRNATKSDVEAHFATHGTGEITEVKLMN---GFGFIEYKDPMDAQ 57
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
D + DG +F G RL V+ AHG R R + ++ R RR+ +R+ +TGLP+
Sbjct: 58 DVVP--DGSNFMGERLTVQFAHGPRHREGGFGNHERAAPR----PRRTPHRMQITGLPND 111
Query: 120 ASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF---RNAF 175
SWQDLKD R++ DV +S+ RD +G G V++ D++ A++KLD EF RN
Sbjct: 112 TSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGREFKGQRNML 170
Query: 176 SRA 178
+R+
Sbjct: 171 TRS 173
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 23/172 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP RER++E F YG + +K GY FVEF++ RDA+DA+ Y
Sbjct: 59 VYVGGLPYGTRERDLERFFRGYGRFRDVLIK-----NGYGFVEFDDYRDADDAV-----Y 108
Query: 69 DFDGHRL----RVELAHGGRGRSSSDRHSSHSSGRGRGVSR-----RSEYRVLVTGLPSS 119
+ +G L R ++ H R S +R++ +S + + R R+EYR+ V L S
Sbjct: 109 ELNGKELLGESRDDMRH---DRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSR 165
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD+MR+AG+V ++ + G+V++ Y D+K+AI KLDD+E
Sbjct: 166 VSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFATYSDLKNAIDKLDDTEL 216
>gi|290562251|gb|ADD38522.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 331
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 94/187 (50%), Gaps = 21/187 (11%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M SR +++GNLP +RER++E F +YG + +I +K Y F EF++ RDA+D
Sbjct: 1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIK----SGKYGFCEFDDYRDADD 56
Query: 61 AIRGRDGYDFDGHRLRVELAHGGR----------------GRSSSDRHSSHSSGRGRGVS 104
A+ +G + + R+ VE A GGR G G
Sbjct: 57 AVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGGGYRGDRYRGRGGGRGKYGPP 116
Query: 105 RRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
R+ YRV+V L + SWQDLKD MRRAG+V F+ D G+V++ + DM+ AI
Sbjct: 117 TRTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKR-NEGVVEFISRRDMERAID 175
Query: 165 KLDDSEF 171
K D+ E
Sbjct: 176 KFDNHEL 182
>gi|95007448|emb|CAJ20669.1| splicing factor, putative [Toxoplasma gondii RH]
Length = 216
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR 106
YAFVEFE R AEDA+ R GY + G LRVE R S+ + G G RR
Sbjct: 74 YAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPARRLGSNPNFIPMGG-ASGPPRR 132
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
+ +R LV+ LP WQ LKDHMRRAG V F++V G G +V++ + +D+K+A++ L
Sbjct: 133 TGFRALVSFLPPGCRWQHLKDHMRRAGPVGFAEVLSHGRG---VVEFEHAEDLKYAVRSL 189
Query: 167 DDSEFRNAFSRAYVRVREYDHRRDGSQS 194
D SE R + ++VR +R G QS
Sbjct: 190 DKSEMRVEGRGSVIKVR--SRKRKGEQS 215
>gi|317036141|ref|XP_001397700.2| pre-RNA splicing factor Srp2 [Aspergillus niger CBS 513.88]
gi|358368362|dbj|GAA84979.1| pre-RNA splicing factor Srp2 [Aspergillus kawachii IFO 4308]
Length = 301
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 23/207 (11%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYG--PIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ ++++E+ F +G I I L G+ F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSS----SDRHSSHSSGRGRGVSRRSEYRVLVT 114
D + G DF G RL V+ A G R + + DR + RR+ +R++V+
Sbjct: 56 RDVVPAFHGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTIFRMMVS 108
Query: 115 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GLP + SWQDLKD R++G DV +S+ R+ G V++ +D+K AI+KLD EF+
Sbjct: 109 GLPET-SWQDLKDFARQSGLDVVYSETGRELG--RGFVEFETANDLKTAIEKLDGREFKG 165
Query: 174 AFSRAYVRVREYDHRRDGSQSPSRGRS 200
+ ++ Y R + P R RS
Sbjct: 166 SRVTCIADIQTYPDER-AIRDPYRSRS 191
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 24/189 (12%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M ++VGNL ER++ D F K+G + + + PPG+AFV F + RDA D
Sbjct: 1 MGDVPGTKVWVGNLGSTCEERDLRDEFSKFGELNKV--WVARNPPGFAFVWFADDRDAGD 58
Query: 61 AIRGRDGYDFDGHRLRVELAH------------------GGRGRSSSDRHSSHSSGRGRG 102
A+R DG G RVE++H GG + + R G
Sbjct: 59 AVREIDGKSIAGREWRVEVSHQRGRDRGPPGGGYGGGGGGGGYGGGGGGGGGYGAPRVGG 118
Query: 103 VSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHA 162
+ R+ Y+V +TGLP W +LKD +R+AGDV ++ V G G+ +++N DDM A
Sbjct: 119 AAPRTGYKVRITGLPEGMRWSELKDFVRKAGDVTYADV----RGDEGVAEFSNRDDMSRA 174
Query: 163 IKKLDDSEF 171
+++LDD+ F
Sbjct: 175 VRELDDTYF 183
>gi|449296860|gb|EMC92879.1| hypothetical protein BAUCODRAFT_114866 [Baudoinia compniacensis
UAMH 10762]
Length = 326
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 97/176 (55%), Gaps = 15/176 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
LY+GNLP + + +VE+ F +G I I L G+ F+E+++A DA D +
Sbjct: 16 LYLGNLPRNATKADVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFH 70
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
G +F G RL V+ A GG + R + + R RR+ +R+ +TGLP SWQDLK
Sbjct: 71 GSEFMGERLVVQFARGG----NRPRDGYNDAPRMAPRPRRTVHRMTITGLPFETSWQDLK 126
Query: 127 DHMRRAG-DVCFSQVFRD---GSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
D R++G DV +S+V R+ G G V+Y D+ A++KLD+ +F+ + R
Sbjct: 127 DFARQSGLDVVYSEVARERDASGGGKGFVEYETAQDLASAVEKLDNHDFKGSTVRC 182
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2 [Oryzias
latipes]
Length = 373
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 27/184 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + +D+K GY FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGRLSYHVREKDIQRFFSGYGKLLEVDMK-----NGYGFVEFEDNRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGR--------------------GRSSSDRHSSHSSGRGR-GVSRRS 107
+ G R+ VE A G R SS+ S GR + G R+
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGSSWGGGRSSGYSSSSNSSSSRTRVGRDKYGPPVRT 118
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
EYR++V L S SWQDLKD MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD
Sbjct: 119 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERT-NQGVIEFRSYSDMKRALDKLD 177
Query: 168 DSEF 171
++
Sbjct: 178 GTDI 181
>gi|156030683|ref|XP_001584668.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980]
gi|154700828|gb|EDO00567.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 307
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 9/175 (5%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + + +VE F +G ++K+ G+ F+E+++A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFNTHGTGEITEIKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G DF G RL V+ A G R +R + + R RR+ +R+ ++GLP
Sbjct: 58 VVPAFHGSDFMGERLTVQFARGTR-----NRDTFANPERTAPRPRRTPHRMQISGLPGET 112
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++ DV +S+ RD G V++ D+K A++KLD EF+ A
Sbjct: 113 SWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAVEKLDGREFKGA 167
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 98/185 (52%), Gaps = 35/185 (18%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG L D+RER++E F YG I I LK G+ FV+ + RDAEDA+R +G
Sbjct: 5 VFVGRLNYDVRERDLERFFRGYGRIEDIVLK-----NGFGFVDISDYRDAEDAVRDLNGK 59
Query: 69 DFDGHRLRVELAHGGR-GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
G R+ VELA G R G DR R G R+ Y++LV L +S SWQDLKD
Sbjct: 60 RLMGERVTVELARGMRRGPPDYDRGP-----RRFGPPTRTNYQLLVENLSTSVSWQDLKD 114
Query: 128 HMRRAGDVCFS---------QVFRD-----GSGT----------TGIVDYTNYDDMKHAI 163
MR+AGDV ++ Q +D G T G+V++ +Y DMK+A+
Sbjct: 115 FMRQAGDVTYTXNLSTSVSWQDLKDFMRQAGDVTYTDAHKLRRHQGVVEFASYSDMKNAL 174
Query: 164 KKLDD 168
+ LD+
Sbjct: 175 RSLDN 179
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 24/176 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y G LP D RER++E F +G I I L+ GYAFVEF++ RDAEDAI +G
Sbjct: 5 VYAGKLPHDTRERDLERFFEGFGRIREILLR-----RGYAFVEFDDYRDAEDAIYELNGA 59
Query: 69 DFDGHRLRVELA-----HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
G R+ VE GG SS+R +R+ +R++V L S W+
Sbjct: 60 KLLGQRIVVEATKRPPRFGG----SSNRPKP---------PQRTYHRLIVENLSSRIDWR 106
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
+LK +MR+AG+V F+ RD G+V++ + DMK A+K DD+E + R Y
Sbjct: 107 ELKAYMRKAGNVTFADAHRD-RMNEGVVEFASRHDMKQALKMFDDTELNGRYIRLY 161
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 96/184 (52%), Gaps = 27/184 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG + I+LK G+ FVEFE+ RD++DA+ +G
Sbjct: 30 VYIGRLSYQTRERDVERFFRGYGRLREINLK-----NGFGFVEFEDPRDSDDAVYELNGK 84
Query: 69 DFDGHRLRVELAHG---------GRGRSSSDRHSSHSSGRGRGVSRR------------S 107
+ G R+ +E A G G DR S S G G RR +
Sbjct: 85 ELCGERVTIEHARGPVRRDYRDSGYSNRGGDRDSYRSDRGGFGPPRRRGGVDKYGPPTRT 144
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
E+R++V L S SWQDLKD+MR+AG+V F+ + G+V+ ++ D+K+ I KLD
Sbjct: 145 EHRLIVENLSSRCSWQDLKDYMRQAGEVTFADAHKQHK-NEGVVELASHSDLKNVIAKLD 203
Query: 168 DSEF 171
+E
Sbjct: 204 GTEI 207
>gi|121705498|ref|XP_001271012.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
gi|119399158|gb|EAW09586.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
Length = 296
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 127/254 (50%), Gaps = 25/254 (9%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYG--PIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ ++++E+ F +G I I L G+ F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSSHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + DG DF G RL V+ A G R + + RR+ +R+L++GLP
Sbjct: 56 RDVVP--DGSDFKGERLTVQFARGPRRKEN---FPGPMDRPNMPRPRRTVFRMLISGLPE 110
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
+ SWQDLKD R++G DV +S+ R+ G V++ D+K A+ KLD +F+ +
Sbjct: 111 T-SWQDLKDFARQSGLDVVYSETGREPG--RGFVEFETAADLKTAVDKLDGRDFKGSRVS 167
Query: 178 AYVRVREYDHR--RDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKS-- 233
++ +D R RD +S S RSY R RG S R +S P +
Sbjct: 168 CIADIQSHDDRALRDPYRSRSPRRSYPPMEEYDRRFPAPRGYSPRHYRERSPVPVRREYY 227
Query: 234 -----SRRSPDRSR 242
RRSP R R
Sbjct: 228 ERDGYGRRSPPRPR 241
>gi|350633625|gb|EHA21990.1| hypothetical protein ASPNIDRAFT_56436 [Aspergillus niger ATCC 1015]
Length = 299
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 25/207 (12%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKY--GPIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ ++++E+ F + G I I L G+ F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSS----SDRHSSHSSGRGRGVSRRSEYRVLVT 114
D + DG DF G RL V+ A G R + + DR + RR+ +R++V+
Sbjct: 56 RDVV--PDGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTIFRMMVS 106
Query: 115 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GLP + SWQDLKD R++G DV +S+ R+ G V++ +D+K AI+KLD EF+
Sbjct: 107 GLPET-SWQDLKDFARQSGLDVVYSETGRELG--RGFVEFETANDLKTAIEKLDGREFKG 163
Query: 174 AFSRAYVRVREYDHRRDGSQSPSRGRS 200
+ ++ Y R + P R RS
Sbjct: 164 SRVTCIADIQTYPDER-AIRDPYRSRS 189
>gi|134083249|emb|CAK46820.1| unnamed protein product [Aspergillus niger]
Length = 367
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 25/207 (12%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKY--GPIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ ++++E+ F + G I I L G+ F+E+E+A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKQDIEEHFSTHGSGKITEIKLMN-----GFGFIEYEDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSS----SDRHSSHSSGRGRGVSRRSEYRVLVT 114
D + DG DF G RL V+ A G R + + DR + RR+ +R++V+
Sbjct: 56 RDVV--PDGSDFKGERLTVQFARGPRRKENFPGPMDRPNMPR-------PRRTIFRMMVS 106
Query: 115 GLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
GLP + SWQDLKD R++G DV +S+ R+ G V++ +D+K AI+KLD EF+
Sbjct: 107 GLPET-SWQDLKDFARQSGLDVVYSETGRELG--RGFVEFETANDLKTAIEKLDGREFKG 163
Query: 174 AFSRAYVRVREYDHRRDGSQSPSRGRS 200
+ ++ Y R + P R RS
Sbjct: 164 SRVTCIADIQTYPDER-AIRDPYRSRS 189
>gi|395522106|ref|XP_003765081.1| PREDICTED: serine/arginine-rich splicing factor 4 [Sarcophilus
harrisii]
Length = 338
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 18/137 (13%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGR------ 99
GY FVEF++ RDA+DA+ +G D G R+ VE A G R R S+ SGR
Sbjct: 31 GYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR------RDGSYGSGRSGYGYR 84
Query: 100 --GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYT 154
GR G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G++++
Sbjct: 85 RSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFV 143
Query: 155 NYDDMKHAIKKLDDSEF 171
+Y DMK A++KLD +E
Sbjct: 144 SYSDMKRALEKLDGTEV 160
>gi|198415633|ref|XP_002121331.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
[Ciona intestinalis]
Length = 292
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 97/193 (50%), Gaps = 38/193 (19%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE +VE F +G I I+LK GY FVEF+++RDA+DA+ +
Sbjct: 6 VFIGRLSHRARENDVERFFKGFGKIRDINLK-----NGYGFVEFDDSRDADDAVYEMNNR 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDR------------------------------HSSHSSG 98
D G R+ VELA G RSS R S + G
Sbjct: 61 DLCGERVTVELAR-GVPRSSGGRDYRPDFRNDYRNDYRRRDDRGGGGGGRVNYFDSRAIG 119
Query: 99 RGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDD 158
+ G R+ YRV+V L + SWQDLKD++R AG+V ++ + G+VD+ YDD
Sbjct: 120 K-YGPPTRTNYRVIVENLSTRVSWQDLKDYLREAGEVTYADAHK-HRRNEGVVDFATYDD 177
Query: 159 MKHAIKKLDDSEF 171
MK AI KLD++E
Sbjct: 178 MKRAIDKLDNTEI 190
>gi|449488807|ref|XP_002189002.2| PREDICTED: serine/arginine-rich splicing factor 4 [Taeniopygia
guttata]
Length = 446
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 18/136 (13%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGR------- 99
Y FVEF++ RDA+DA+ +G D G R+ VE A G R R SS+ SGR
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR------RDSSYGSGRSGYGYRR 59
Query: 100 -GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
GR G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G++++ +
Sbjct: 60 SGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFKS 118
Query: 156 YDDMKHAIKKLDDSEF 171
Y DMK A++KLD +E
Sbjct: 119 YSDMKRALEKLDGTEV 134
>gi|119628062|gb|EAX07657.1| splicing factor, arginine/serine-rich 4, isoform CRA_a [Homo
sapiens]
Length = 484
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 85/145 (58%), Gaps = 18/145 (12%)
Query: 38 LKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSS 97
L++ P Y FVEF++ RDA+DA+ +G D G R+ VE A G R R S+ S
Sbjct: 18 LEVLHPAPRYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR------RDGSYGS 71
Query: 98 GR--------GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSG 146
GR GR G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G
Sbjct: 72 GRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRK 130
Query: 147 TTGIVDYTNYDDMKHAIKKLDDSEF 171
G++++ +Y DMK A++KLD +E
Sbjct: 131 NEGVIEFVSYSDMKRALEKLDGTEV 155
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Oreochromis
niloticus]
Length = 293
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 29/181 (16%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLSPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 DFDGHRLRVELA-----------HGGRGRSSSDRHSSHSSGRGRGVSR-------RSEYR 110
+ R+ +E A GG G SDR+ GRG SR R+E R
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRGGGGGGGRFSDRY-----GRGSQNSRSRNPPPMRTENR 115
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
++V L S SWQDLKD MR+AG+V F+ R G+V++ ++ D+K+A+ KL E
Sbjct: 116 LIVENLSSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASHSDLKNALDKLSGKE 174
Query: 171 F 171
Sbjct: 175 I 175
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 92/178 (51%), Gaps = 21/178 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRH---------------SSHSSGRGRGVSRRSEYRVLV 113
R+ +E A RGR S+S G G R+E+R++V
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPRYGPPVRTEHRIIV 120
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD MR+AG+V + R G+V++ +Y DMK+A+ KLD E
Sbjct: 121 ENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNR-NEGVVEFASYTDMKNALDKLDGVEL 177
>gi|209876590|ref|XP_002139737.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555343|gb|EEA05388.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 377
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 19/233 (8%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VGNLP E+++ D F K G I+ ++LK + F+E+EE AE A R D
Sbjct: 9 RKVFVGNLPAGYAEQDLRDFFSKVGTISKLELKQ-----RFCFIEYEEESQAEAAHRELD 63
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSS------GRGRGVSRRSEYRVLVTGLPSSA 120
G +F G R+ V+ H R+ +++ GRG R+ YRV V L +A
Sbjct: 64 GVEFGGQRIAVQ-PHDPLVRTKDVENTNKPQYNRPLPSDGRGPPRK-HYRVCVFNLDENA 121
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
SW+DLKD+ R+ G+V +S VF G+V+Y ++MK A++++ + F RA
Sbjct: 122 SWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEEIPNLPFLGKTIRAEE 181
Query: 181 RVREYDHRRDGSQSPSRGR----SYSRGRSESRSRSRSRGRSYSRSRSQSKSP 229
V + D + R SYS G R RSR S R R +S+SP
Sbjct: 182 DVGQLDRELAAANGYGIKRRSPPSYSSGPYGGRPRSRY--PSPPRYRQRSRSP 232
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELA---------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
+ R+ +E A G R S ++G G R+E+R++V L S
Sbjct: 61 ELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGSRYGPPVRTEHRLIVENLSSR 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD MR+AG+V F R + G+V++ + D+K+AI KLD +E
Sbjct: 121 ISWQDLKDLMRKAGEVTFVDAHRP-TKNEGVVEFASRSDLKNAISKLDGTEL 171
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 23 VFIGRLSPQARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 77
Query: 69 DFDGHRLRVELA---------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
+ R+ +E A G R S ++G G R+E+R++V L S
Sbjct: 78 ELLSERVTIEHARSRRGRGGGPPGMARFGGGYRQSRNTGSRYGPPVRTEHRLIVENLSSR 137
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD MR+AG+V F R + G+V++ + D+K+AI KLD +E
Sbjct: 138 ISWQDLKDLMRKAGEVTFVDAHRP-TKNEGVVEFASRSDLKNAISKLDGTEL 188
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 370
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG +P ER++E F YG + I LK GY FVEF+ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 DFDGHRLRVELA--------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
D G RL VE A R S G R+EYRV+V L S
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGSGRDRYGPPTRTEYRVIVENLSSRV 118
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD MR+AG+V ++ + + GIV++ Y DMK AI+K D E
Sbjct: 119 SWQDLKDLMRKAGEVTYADAHK-SAKNDGIVEFAAYADMKEAIEKFDGYEL 168
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
+R + V NL + ++++DL K G + + D + G VEF D ++AI
Sbjct: 103 TRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDG--IVEFAAYADMKEAI 160
Query: 63 RGRDGYDFDGHRLRV 77
DGY+ G RLRV
Sbjct: 161 EKFDGYELYGRRLRV 175
>gi|345315998|ref|XP_001512981.2| PREDICTED: hypothetical protein LOC100082305, partial
[Ornithorhynchus anatinus]
Length = 393
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 18/139 (12%)
Query: 44 PPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGR---- 99
P Y FVEF++ RDA+DA+ +G D G R+ VE A G R R S+ SGR
Sbjct: 23 PVWYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR------RDGSYGSGRSGYG 76
Query: 100 ----GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVD 152
GR G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G+++
Sbjct: 77 YRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIE 135
Query: 153 YTNYDDMKHAIKKLDDSEF 171
+ +Y DMK A++KLD +E
Sbjct: 136 FVSYSDMKRALEKLDGTEV 154
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus rotundus]
Length = 278
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPSAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|403418011|emb|CCM04711.1| predicted protein [Fibroporia radiculosa]
Length = 328
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
+R LY+G LP D R +V F YG I +D ++ G+ FVEFE +RDA+DA+R
Sbjct: 2 ARRLYLGRLPPDARSEDVSKFFDGYGRI--VDCRVMT---GFGFVEFESSRDADDAVRDF 56
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
+G F G + VE A + S R R R +R++V+G+ SWQDL
Sbjct: 57 NGKAFMGANIVVEFA-----KESRPRREVFEPERAPRARRPPGFRLVVSGISRDTSWQDL 111
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KD R AG V ++ + RD +G GI++Y + DD + A+K+LD + R
Sbjct: 112 KDFGREAGSVSYADIDRDAAG-EGILEYLSRDDAERAVKELDGKDLR 157
>gi|384498124|gb|EIE88615.1| hypothetical protein RO3G_13326 [Rhizopus delemar RA 99-880]
Length = 429
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 36/172 (20%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M S +Y+GNLP ++ + E+E +F Y P+ ++ + R + FVEF+ DA+D
Sbjct: 180 MGSSDGNRVYLGNLPVNVSKSEIESVFKNYNPV---EVTLKER---FGFVEFDNKVDADD 233
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
AI D H + SG R RS YRV++ LP
Sbjct: 234 AIH--------------------------DLHGTKVSGSSR--EERS-YRVVIKNLPPRT 264
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
+WQD+KD MR+AG V F+ V +D G G+V++ YDDMK+A+++LDD +
Sbjct: 265 TWQDVKDFMRKAGRVVFADVLKDCDG-EGVVEFAQYDDMKYALRELDDKKLN 315
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIKDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 169
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Monodelphis
domestica]
Length = 265
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 169
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGXIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|156402467|ref|XP_001639612.1| predicted protein [Nematostella vectensis]
gi|156226741|gb|EDO47549.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 15/172 (8%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYG--PIAHIDLKIPPRPPGYAFVEFEEARDAEDAIR 63
S +Y+G LP RE +V+ FY YG I I LK GY FVEF+ + DAEDA+
Sbjct: 2 SNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILK-----DGYGFVEFDYSDDAEDAVY 56
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR---GVSRRSEYRVLVTGLPSSA 120
+G G R+ VE A G +S +SS GR R G R+ +R+ V L S
Sbjct: 57 ECNGKKMLGERILVEPARG----TSKGGYSSGRRGRARDKYGPPLRTPWRMTVENLSSRV 112
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKD+ R+ GDV + + G G++++ D+K A++KLD E +
Sbjct: 113 SWQDLKDYCRQIGDVTYGDAHKQKQG-EGVIEFATKKDLKKALRKLDGKELK 163
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 371
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG +P ER++E F YG + I LK GY FVEF+ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 DFDGHRLRVELA---------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
D G RL VE A G R G R+EYRV+V L S
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENLSSR 118
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD MR+AG+V ++ + + GIV++ Y DMK AI+K D E
Sbjct: 119 VSWQDLKDLMRKAGEVTYADAHK-SAKNDGIVEFAAYADMKEAIEKFDGYEL 169
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
+R + V NL + ++++DL K G + + D + G VEF D ++AI
Sbjct: 104 TRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDG--IVEFAAYADMKEAI 161
Query: 63 RGRDGYDFDGHRLRV 77
DGY+ G RLRV
Sbjct: 162 EKFDGYELYGRRLRV 176
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 93/175 (53%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDYRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRH------------SSHSSGRGRGVSRRSEYRVLVTGL 116
+ R+ +E A RGR S S G G R+E+R++V L
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVENL 120
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+ G+V F R G+V++ ++ DMK+AI+KLD ++
Sbjct: 121 SSRISWQDLKDLMRKVGEVTFVDAHRT-KKNEGVVEFASHSDMKNAIEKLDGTDL 174
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|345793997|ref|XP_865416.2| PREDICTED: serine/arginine-rich splicing factor 4 isoform 3 [Canis
lupus familiaris]
Length = 469
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 18/136 (13%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGR------- 99
Y FVEF++ RDA+DA+ +G D G R+ VE A G R R S+ SGR
Sbjct: 6 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR------RDGSYGSGRSGYGYRR 59
Query: 100 -GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
GR G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G++++ +
Sbjct: 60 SGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVS 118
Query: 156 YDDMKHAIKKLDDSEF 171
Y DMK A++KLD +E
Sbjct: 119 YSDMKRALEKLDGTEV 134
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 24/176 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS--------SDRHSSH--SSGRGRGVSRRSEYRVLVTG 115
+ DG L RV + H SDR SS + R R+E R++V
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGGRYSDRFSSRRPRNDRRNAPPVRTENRLIVEN 115
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 LSSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 170
>gi|402576825|gb|EJW70782.1| hypothetical protein WUBG_18310 [Wuchereria bancrofti]
Length = 153
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 17 DIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLR 76
D+++R++ED+FYKYG I ID+K P +AF+EF++ RDA DA+ GRDGYDFDG R+R
Sbjct: 31 DVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARDAVHGRDGYDFDGCRIR 89
Query: 77 VELAHGGRGRSSSDRH---SSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
VEL G R R S R RRS YRV+V+GLP + SWQDLK
Sbjct: 90 VELTRGVGPRGPGGRPLYGPDPRSPRRGPPPRRSGYRVIVSGLPDTGSWQDLK 142
>gi|221485545|gb|EEE23826.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 351
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G+LPG+ +++VE F K+G I ++ K GY F+E+ + RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 DFDGHR----LRVELAHGGRGRSS-SDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
G R LRVE+ RSS D + RG RR + + V GLP S SWQ
Sbjct: 77 PPPGMRGAAPLRVEIPL---ARSSRPDGFGEEALPRGL-AGRRGRFVLEVRGLPPSGSWQ 132
Query: 124 DLKDHMRRAGDVCFSQVFRDGSG---TTGIVDYTNYDDMKHAIKKLDDSEFRN 173
DLKDH R GDV F++V +D G V + + DM AI+ LD S FR+
Sbjct: 133 DLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEVLDGSTFRS 185
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG +P ER++E F YG + I LK GY FVEF+ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 DFDGHRLRVELA------------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
D G RL VE A GG G R G R+EYRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ + + GIV++ Y DMK AI+K D E
Sbjct: 119 SSRVSWQDLKDLMRKAGEVTYADAHK-SAKNDGIVEFAAYADMKEAIEKFDGYEL 172
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
+R + V NL + ++++DL K G + + D + G VEF D ++AI
Sbjct: 107 TRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDG--IVEFAAYADMKEAI 164
Query: 63 RGRDGYDFDGHRLRV 77
DGY+ G RLRV
Sbjct: 165 EKFDGYELYGRRLRV 179
>gi|237844047|ref|XP_002371321.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211968985|gb|EEB04181.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|221506395|gb|EEE32030.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 351
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G+LPG+ +++VE F K+G I ++ K GY F+E+ + RDA DAI G
Sbjct: 17 IYIGSLPGEYTDKDVEREFEKFGKIIKLEFKRTVSGAGYCFLEYADPRDARDAIAQLHGR 76
Query: 69 DFDGHR----LRVELAHGGRGRSS-SDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
G R LRVE+ RSS D + RG RR + + V GLP S SWQ
Sbjct: 77 PPPGMRGAAPLRVEIPL---ARSSRPDGFGEEALPRGL-AGRRGRFVLEVRGLPPSGSWQ 132
Query: 124 DLKDHMRRAGDVCFSQVFRDGSG---TTGIVDYTNYDDMKHAIKKLDDSEFRN 173
DLKDH R GDV F++V +D G V + + DM AI+ LD S FR+
Sbjct: 133 DLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSKRDMMEAIEVLDGSTFRS 185
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG +P ER++E F YG + I LK GY FVEF+ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 DFDGHRLRVELA------------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
D G RL VE A GG G R G R+EYRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ + + GIV++ Y DMK AI+K D E
Sbjct: 119 SSRVSWQDLKDLMRKAGEVTYADAHK-SAKNDGIVEFAAYADMKEAIEKFDGYEL 172
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
+R + V NL + ++++DL K G + + D + G VEF D ++AI
Sbjct: 107 TRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDG--IVEFAAYADMKEAI 164
Query: 63 RGRDGYDFDGHRLRV 77
DGY+ G RLRV
Sbjct: 165 EKFDGYELYGRRLRV 179
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 97/183 (53%), Gaps = 26/183 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RER+VE F YG + I LK GY FVEFE+ RDA+DA+ +G
Sbjct: 5 VYIGRLSYQVRERDVERFFKGYGRVTDILLK-----NGYGFVEFEDYRDADDAVYELNGK 59
Query: 69 DFDGHRLRVELAHGG--------------RGRSSSDRHSSHSSGR------GRGVSRRSE 108
D G R+ VE A G DR++S++ R G R++
Sbjct: 60 DLMGDRVLVEHAKGTPRGEGRSSSGGRGSDRGGGGDRYNSYAPPRRSARDSRYGPPVRTQ 119
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDD 168
YR++V L S SWQDLKD+MR+AG+V ++ + GIV++ DM +AI+KL+
Sbjct: 120 YRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHK-SKRNEGIVEFATRSDMDNAIRKLNK 178
Query: 169 SEF 171
+E
Sbjct: 179 TEI 181
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG +P ER++E F YG + I LK GY FVEF+ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 DFDGHRLRVELA------------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
D G RL VE A GG G R G R+EYRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V ++ + + GIV++ Y DMK AI+K D E
Sbjct: 119 SSRVSWQDLKDLMRKAGEVTYADAHK-SAKNDGIVEFAAYADMKEAIEKFDGYEL 172
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
+R + V NL + ++++DL K G + + D + G VEF D ++AI
Sbjct: 107 TRTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDG--IVEFAAYADMKEAI 164
Query: 63 RGRDGYDFDGHRLRV 77
DGY+ G RLRV
Sbjct: 165 EKFDGYELYGRRLRV 179
>gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 18/136 (13%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGR------- 99
Y FVEF++ RDA+DA+ +G D G R+ VE A G R R S+ SGR
Sbjct: 37 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR------RDGSYGSGRSGYGYRR 90
Query: 100 -GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
GR G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G++++ +
Sbjct: 91 SGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVS 149
Query: 156 YDDMKHAIKKLDDSEF 171
Y DMK A++KLD +E
Sbjct: 150 YSDMKRALEKLDGTEV 165
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9 [Canis
lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like [Ailuropoda
melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15 [Canis
lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Felis
catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Felis
catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3 [Felis
catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cricetulus
griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|408390763|gb|EKJ70150.1| hypothetical protein FPSE_09676 [Fusarium pseudograminearum CS3096]
Length = 312
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 98/173 (56%), Gaps = 8/173 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ ++ LY+GNLP + + +VE F +G ++K+ G+ F+E+++ DA D
Sbjct: 1 MTEVSATRLYLGNLPRNATKTDVEAHFATHGTGEITEVKLMN---GFGFIEYKDPMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G DF G RL V+ A G R R + +H R RR+ +R+ +TGLP+
Sbjct: 58 VVPAFHGSDFMGERLTVQFARGSRHREGGN-FGNHERTAPR--PRRTPHRMQITGLPNDT 114
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKD R++ DV +S+ RD +G G V++ D++ A++KLD EF+
Sbjct: 115 SWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGREFK 166
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 91/168 (54%), Gaps = 7/168 (4%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
SR LY+G LP D R +V F YG I ID ++ G+ FVEFE A+DAEDA+
Sbjct: 2 SRRLYLGRLPTDARSDDVSKFFDGYGRI--IDCRVMT---GFGFVEFENAKDAEDAVHNF 56
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSE-YRVLVTGLPSSASWQD 124
+G F G + VE A R R + G G SRR R++V+G+ SWQD
Sbjct: 57 NGKPFMGVNIVVEFAKESRPRREVYDNDRGGGGHGAPRSRRPPGIRLIVSGVSRDTSWQD 116
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
LKD R AG V F+ + RD G G+++Y + +D A+K+LD + R
Sbjct: 117 LKDFGRDAGSVSFADIDRDVPG-QGVLEYLSREDADRAVKELDGKDLR 163
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSHS--SGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus scrofa]
Length = 221
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSHS--SGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|345571438|gb|EGX54252.1| hypothetical protein AOL_s00004g285 [Arthrobotrys oligospora ATCC
24927]
Length = 377
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 121/250 (48%), Gaps = 25/250 (10%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYG--PIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
A + +Y+ +++VED F K+G I I L G+ F+E+ DA D +
Sbjct: 22 AIQLVYLCPFVSTATKKDVEDFFVKHGHGTIQEIKLMN-----GFGFIEYSNPSDARDIV 76
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
G +F RL V+ A G R + + SG RR+ YR+ ++GLP+ SW
Sbjct: 77 PIFHGKEFMDSRLTVQFARGPR---PTRNDFNGPSGDRTPRPRRTPYRMNISGLPTDTSW 133
Query: 123 QDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA------- 174
QDLKD R++G DV FS+V R+ G +GIV++ DD++ AI KLD+ +F+
Sbjct: 134 QDLKDFARKSGVDVVFSEVSRNRDG-SGIVEFETADDLRIAINKLDNYDFKGGRVSCTSD 192
Query: 175 ----FSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPK 230
SR R RR+G SP GR YS GR S R R YS R + SP
Sbjct: 193 QQARNSRGRSRSPPPAGRRNG-YSPREGRGYSPGRRGGYSPHRGGDRGYS-PRGRGYSPP 250
Query: 231 AKSSRRSPDR 240
+ R DR
Sbjct: 251 RGNDNRGGDR 260
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 12/167 (7%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
SR LY+G LP D R +V F YG I +D ++ G+ FVEFE +RDAEDA+
Sbjct: 2 SRRLYLGRLPTDARTDDVSKFFEGYGKI--VDCRVMT---GFGFVEFESSRDAEDALNHF 56
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
+G F G L VE A R R + + R G+ R++V+G+ SWQDL
Sbjct: 57 NGKPFMGTNLVVEFAKESRPRRDPYDDRAPRARRPPGI------RIIVSGISRDTSWQDL 110
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KD R AG V F+ + RD G G+++Y +D + A+K LD + R
Sbjct: 111 KDFGREAGSVSFADIERDVPG-QGVLEYLAREDAERAVKDLDGKDLR 156
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 102/224 (45%), Gaps = 52/224 (23%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
++++G LP +R R+++D F YG I I +K YAFVEFE+ RDA DA++ D
Sbjct: 7 SVWMGGLPERVRSRDIDDFFKGYGRIVDISIKTK-----YAFVEFEDERDAADAVKDLDD 61
Query: 68 YDFDGHRLRVELAHG------------------------------------GRGRS---- 87
+G R+R+E++ G G+GRS
Sbjct: 62 QKLNGSRVRLEVSKGCKDKYRDFQRTGRVRYRSYSKSVSPGRRRHRSRSPVGKGRSRSRS 121
Query: 88 ---SSDRHSSHSSG---RGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 141
SDR + S + G ++ + V V L S SWQDLKD MR+AG+V +
Sbjct: 122 PARGSDRRETFYSKPAYKKYGAPEKTRWTVEVDNLSSRCSWQDLKDFMRKAGEVTYGDAH 181
Query: 142 RDGSG-TTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
G G+V Y DD K AI++LD EF + +VRE
Sbjct: 182 GSDIGRNRGVVCYEREDDAKRAIEELDGREFNGRDVKLAFKVRE 225
>gi|90076960|dbj|BAE88160.1| unnamed protein product [Macaca fascicularis]
Length = 182
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Query: 104 SRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAI 163
SRRSE RV+V+GLP S SWQDLKDHMR AGDVC++ V+RDG TG+V++ +DM +A+
Sbjct: 45 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 101
Query: 164 KKLDDSEFR-NAFSRAYVRVR 183
+KLD+++FR + AY+RV+
Sbjct: 102 RKLDNTKFRSHEGETAYIRVK 122
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRSAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 169
>gi|158429186|pdb|2O3D|A Chain A, Structure Of Human Sf2ASF RNA RECOGNITION MOTIF 2 (RRM2)
Length = 113
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Query: 104 SRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAI 163
SRRSE RV+V+GLP S SWQDLKDHMR AGDVC++ V+RDG TG+V++ +DM +A+
Sbjct: 11 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 67
Query: 164 KKLDDSEFR-NAFSRAYVRVR 183
+KLD+++FR + AY+RV+
Sbjct: 68 RKLDNTKFRSHEGETAYIRVK 88
>gi|417410943|gb|JAA51935.1| Putative serine/arginine-rich splicing factor 4, partial [Desmodus
rotundus]
Length = 467
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 18/136 (13%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGR------- 99
Y FVEF++ RDA+DA+ +G D G R+ VE A G R R S+ SGR
Sbjct: 1 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR------RDGSYGSGRSGYGYRR 54
Query: 100 -GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
GR G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G++++ +
Sbjct: 55 SGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVS 113
Query: 156 YDDMKHAIKKLDDSEF 171
Y DMK A++KLD +E
Sbjct: 114 YSDMKRALEKLDGTEV 129
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 93/175 (53%), Gaps = 21/175 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSS------GRGRGVSR------RSEYRVLVTGL 116
+ R+ +E A R R R GRG SR R+E R++V L
Sbjct: 61 ELCNERVTIEHA---RVRLRGGRGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLIVENL 117
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F+ R G+V++ ++ D+K+A++KL E
Sbjct: 118 SSRVSWQDLKDFMRQAGEVTFADAHRPNL-NEGVVEFASHSDLKNALEKLSGKEI 171
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 13/169 (7%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
SR LY+G LP D R +V+ F +G I ID ++ G+ FVEFE +DAE+A+
Sbjct: 2 SRRLYLGRLPPDARSEDVQKFFDGFGRI--IDCRVMT---GFGFVEFESPKDAEEAVHTF 56
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG--VSRRSEYRVLVTGLPSSASWQ 123
+G F G + VE A + S R + + RG G R R++VTG+ SWQ
Sbjct: 57 NGKSFMGANIVVEFA-----KESRPRREPYENERGHGPRARRPPGIRLVVTGVSRDTSWQ 111
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
DLKD R AG V F+ + R+ G G+++Y N +D A+++LD E R
Sbjct: 112 DLKDFGRDAGSVSFADIDRESPG-QGVLEYLNREDADRAVRELDGKELR 159
>gi|363742346|ref|XP_417747.3| PREDICTED: serine/arginine-rich splicing factor 4 [Gallus gallus]
Length = 214
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 79/125 (63%), Gaps = 8/125 (6%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-GVSR 105
Y FVEF++ RDA+DA+ +G D G R+ VE A G RG + SGR + G
Sbjct: 4 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRG------YGYRRSGRDKYGPPT 57
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G++++ +Y DMK A++K
Sbjct: 58 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFKSYSDMKRALEK 116
Query: 166 LDDSE 170
LD +E
Sbjct: 117 LDGTE 121
>gi|225711268|gb|ACO11480.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 197
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D+ EV ++F KY D+ + R +AFVEF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPSDVTTSEVGEIFAKYR--NRFDVVLKTR---FAFVEFDHNRDADHALERLDGT 73
Query: 69 DFDGHRLRVELAHGGRG------RSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSAS 121
F G R+ VE+A G + R DR + ++ + G ++Y++++ L +
Sbjct: 74 LFRGQRIVVEIARGPKTADKYLFRGGMDREPTQATWVQKYGAPEITQYKLIIRNLSTRIE 133
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQDLKD MR+AG V ++QV R+ GIV + N DM AI DD E
Sbjct: 134 WQDLKDLMRKAGRVTYAQVHRNNL-REGIVCFENKHDMLRAIDIFDDYEL 182
>gi|149053808|gb|EDM05625.1| rCG34610, isoform CRA_d [Rattus norvegicus]
Length = 181
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Query: 104 SRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAI 163
SRRSE RV+V+GLP S SWQDLKDHMR AGDVC++ V+RDG TG+V++ +DM +A+
Sbjct: 49 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 105
Query: 164 KKLDDSEFR-NAFSRAYVRVR 183
+KLD+++FR + AY+RV+
Sbjct: 106 RKLDNTKFRSHEGETAYIRVK 126
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 22/25 (88%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPI 33
+YVGNLP DIR +++ED+FYKYG I
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAI 42
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 23/179 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G LP ++ER++E F YG + + +K GY FVEFE+ RDA+DA+ +G
Sbjct: 5 VYIGGLPYRVKERDIERFFRGYGKLREVLIK-----NGYGFVEFEDYRDADDAVYELNGK 59
Query: 69 DFDGHRLRVELAHGGRGRSS----------------SDRHSSHSSGRGRGVSRRSEYRVL 112
+ G R+ VE A G R S+ +++ R G R++YR++
Sbjct: 60 ELCGERVSVEHARGSGRRGGRDDRNDRDHRDRGSRRSNWMDNNAPPR-YGPPTRTDYRLV 118
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
V L S SWQDLKD+MR+AG+V ++ + G+V++ +Y D+K AI+KLD ++
Sbjct: 119 VENLSSRVSWQDLKDYMRQAGEVTYADAHKQHR-NEGVVEFASYSDLKTAIEKLDGTDL 176
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 15/172 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEF++ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAVYELDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSS--------SDRHSSHSS-GRGRGVSRRSEYRVLVTGLPSS 119
+ R+ +E A +DR SS G R+E R++V L S
Sbjct: 61 ELCNERVTIEHARLRSRGGPRGLGRGRYNDRFSSRRPRGDRSAPPIRTENRLIVENLSSR 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 121 VSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 171
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 90/182 (49%), Gaps = 25/182 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG L RE++VE F YG I IDLK G+ FVEF++ RDAEDA+ DG
Sbjct: 6 IFVGRLNPSAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSS------------GRGRGVSR-------RSEY 109
+ R+ +E A GRG SR R+E
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRSRNPPPMRTEN 120
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R++V L S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+A++KL
Sbjct: 121 RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYSDLKNALEKLSGK 179
Query: 170 EF 171
E
Sbjct: 180 EI 181
>gi|440637919|gb|ELR07838.1| hypothetical protein GMDG_00459 [Geomyces destructans 20631-21]
Length = 296
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 15/178 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP D + +VE F +G ++K+ G+ F+E+E+A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRDATKADVEAHFATHGTGTIKEIKLMN---GFGFIEYEDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGR---SSSDRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
+ G + G RL V+ A G R R +++DR + RR+ +R+ ++GL
Sbjct: 58 VVPAFHGSELKGDRLTVQFARGSRQRDNFAATDRTAPR--------PRRTPHRMQISGLS 109
Query: 118 SSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++ DV +S+ RD G V++ D++ A++KLD EF+ A
Sbjct: 110 GETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLRTAVEKLDGREFKGA 167
>gi|425767261|gb|EKV05835.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum
PHI26]
gi|425780059|gb|EKV18081.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum Pd1]
Length = 303
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 16/206 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYG--PIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ + ++E+ F +G I I L G+ F+E+++ DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + G DF G RL V+ A G R R + + + R RR+ +R+ ++GLP
Sbjct: 56 RDIVPAFHGSDFKGERLTVQFARGPR-RKEAFQGPPDRNALPR--PRRTMFRMQISGLPE 112
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
+ SWQDLKD R++G DV +S+ R+ G V++ D+K A++KLD EF+ +
Sbjct: 113 T-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETASDLKTAVEKLDQREFKGSVVS 169
Query: 178 AYVRVREYDHRRDGSQSPSRGRSYSR 203
++ ++ R + P R RS R
Sbjct: 170 CVADIQNFEER--PVRDPYRSRSPPR 193
>gi|401397011|ref|XP_003879960.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
gi|325114368|emb|CBZ49925.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
Length = 378
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAH-----GGRGRSSSDRHSSHSSGRGR 101
YAFVEFE R AEDA+ R GY + G LRVE G G + + + G
Sbjct: 6 YAFVEFETIRAAEDAVACRHGYLYRGRSLRVEFTAQPSRRAGSGVNPNTIPTGSFGGGSA 65
Query: 102 GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKH 161
G RR+ +RVLV+ LP WQ LKDHMR+AG V F++V G G+V+Y + +D+++
Sbjct: 66 GPPRRTGHRVLVSFLPPGCRWQHLKDHMRKAGPVGFAEVLSQGR---GVVEYEHPEDLQY 122
Query: 162 AIKKLDDSEFR 172
A++ LD +E R
Sbjct: 123 AVRSLDKTELR 133
>gi|46134285|ref|XP_389458.1| hypothetical protein FG09282.1 [Gibberella zeae PH-1]
Length = 330
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 98/173 (56%), Gaps = 8/173 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ ++ LY+GNLP + + +VE F +G ++K+ G+ F+E+++ DA D
Sbjct: 1 MTEVSATRLYLGNLPRNATKTDVEAHFATHGTGEITEVKLMN---GFGFIEYKDPMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G DF G RL V+ A G R R + +H R RR+ +R+ +TGLP+
Sbjct: 58 VVPAFHGSDFMGERLTVQFARGSRHREGGN-FGNHERTAPR--PRRTPHRMQITGLPNDT 114
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKD R++ DV +S+ RD +G G V++ D++ A++KLD EF+
Sbjct: 115 SWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGREFK 166
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G+L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELA------------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
+ R+ +E A G S SSG G R+E+R++V L
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGYRPSRSSGPRYGPPVRTEHRLIVENL 120
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F R G+V++ + DMK AI K D +E
Sbjct: 121 SSRISWQDLKDMMRKAGEVTFVDAHRPNK-NEGVVEFASRSDMKSAISKFDGTEL 174
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 88/175 (50%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG +P ER++E F YG + I LK GY FVEF+ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 DFDGHRLRVELA------------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
D G RL VE A GG G R G R+EYRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRRYGPPTRTEYRVIVENL 118
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQ+LKD MR+AG+V ++ + + GIV++ Y DMK AI+K D E
Sbjct: 119 SSRVSWQELKDLMRKAGEVTYADAHK-SAKNDGIVEFAAYADMKEAIEKFDGYEL 172
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
+R + V NL + +E++DL K G + + D + G VEF D ++AI
Sbjct: 107 TRTEYRVIVENLSSRVSWQELKDLMRKAGEVTYADAHKSAKNDG--IVEFAAYADMKEAI 164
Query: 63 RGRDGYDFDGHRLRV 77
DGY+ G RLRV
Sbjct: 165 EKFDGYELYGRRLRV 179
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 109/194 (56%), Gaps = 7/194 (3%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
S R LY+G +P + ++E F +YG + +D++I G+ F+E+++ RDAEDA+
Sbjct: 2 SSPGRRLYIGRIPQEATRTDIEKYFGRYGTL--LDVRIMA---GFGFLEYDQVRDAEDAV 56
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
+G +F G RL VE A RG S G G RRS +R++V G+ SW
Sbjct: 57 HDLNGREFMGDRLIVEFAKAPRGGREMYGGGGGGSYGGGGGPRRSGFRLIVKGISHETSW 116
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
QDLKD R+AG+V + V R+ G G+++Y++ DD +A++KLD ++ + +
Sbjct: 117 QDLKDFARQAGNVIRADVDRNMPG-EGLIEYSSQDDADNALRKLDGTDLKGMVVTLF-ED 174
Query: 183 REYDHRRDGSQSPS 196
R RRD S+SPS
Sbjct: 175 RPGGGRRDRSRSPS 188
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKI-PPRPPGYAFVEFEEARDAE 59
MSS + T+YVGNLP D+RE+EVEDLF+KYG I ++++K +AFV+F+ RDA+
Sbjct: 1 MSSSSESTIYVGNLPPDVREKEVEDLFHKYGDIRNVEVKTRHGETHSFAFVQFDSHRDAK 60
Query: 60 DAIRGRDGYDFDGHRLRVEL 79
+A+R RDGYDFDG RLRVE
Sbjct: 61 EAVRSRDGYDFDGKRLRVEF 80
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Query: 97 SGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNY 156
SGR G RRS+YR++V GLP S SWQD+KDH+R AGD+C++ V GIV++T
Sbjct: 147 SGRQGGPLRRSDYRLIVEGLPPSGSWQDVKDHLREAGDICYANV----ENGRGIVEFTRA 202
Query: 157 DDMKHAIKKLDDSEFR-NAFSRAYVRVREYDHRRDGSQSPSRGRSYSR 203
+DM AI+K DD++ + + AY+RV+E D R S+SP R SR
Sbjct: 203 EDMHKAIRKFDDTKLKSHKGETAYIRVKE-DTRSSRSRSPKTSRRRSR 249
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP DIR +++ED+FYKYG I IDLK P +AFVEFE+ RDAEDA+ GRDGY
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 69 DFDGHRLRVEL 79
D+DG+RLRVE
Sbjct: 78 DYDGYRLRVEF 88
>gi|426222714|ref|XP_004005530.1| PREDICTED: uncharacterized protein LOC101109078 [Ovis aries]
Length = 437
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 18/136 (13%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGR------- 99
Y FVEF++ RDA+DA+ +G D G R+ VE A G R R S+ SGR
Sbjct: 23 YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPR------RDGSYGSGRSGYGYRR 76
Query: 100 -GR---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
GR G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G++++ +
Sbjct: 77 SGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVS 135
Query: 156 YDDMKHAIKKLDDSEF 171
Y DMK A++KLD +E
Sbjct: 136 YSDMKRALEKLDGTEV 151
>gi|340516476|gb|EGR46724.1| predicted protein [Trichoderma reesei QM6a]
Length = 311
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 123/238 (51%), Gaps = 11/238 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + +VE F +G ++K+ G+ F+E+++A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRHATKSDVEAHFATHGTGEITEVKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G DF G RL V+ A G R R H RR+ +R+ +TGLP+
Sbjct: 58 VVPAFHGSDFMGERLTVQFARGTRHREGGMGHERAPP-----RPRRTPHRMQITGLPNDT 112
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
SWQDLKD R++ DV +S+ RD +G G V++ D++ AI+KLD EF+ + +
Sbjct: 113 SWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAIEKLDGREFKGSRVQCI 171
Query: 180 VRVREYDHRRDGSQSPSRG-RSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRR 236
V ++ RD ++S S G R Y ++ R R YSR + S + +S RR
Sbjct: 172 VDLQPDMPPRDRARSRSPGRRPYPPPAFDNYDRRGGPHRGYSREAPPAYSYRDRSPRR 229
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 86/174 (49%), Gaps = 17/174 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG +P ER++E F YG + I LK GY FVEF+ +DA+DA+ G
Sbjct: 4 VYVGRIPPRCTERDIERFFKGYGRLRDIVLK-----NGYGFVEFDNEKDADDAVYDLHGR 58
Query: 69 DFDGHRLRVELA-----------HGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
D G RL VE A G G S G R+EYRV+V L
Sbjct: 59 DLRGERLIVEHARLPPGTRGGSRRAGGGGGGGGGGGGGSGRDRYGPPTRTEYRVIVENLS 118
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD R+AG+V ++ + + GIV++ Y DMK AI+K D E
Sbjct: 119 SRVSWQDLKDLTRKAGEVTYADAHK-SAKNDGIVEFAAYADMKEAIEKFDGYEL 171
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
+R + V NL + ++++DL K G + + D + G VEF D ++AI
Sbjct: 106 TRTEYRVIVENLSSRVSWQDLKDLTRKAGEVTYADAHKSAKNDG--IVEFAAYADMKEAI 163
Query: 63 RGRDGYDFDGHRLRV 77
DGY+ G RLRV
Sbjct: 164 EKFDGYELYGRRLRV 178
>gi|358398894|gb|EHK48245.1| hypothetical protein TRIATDRAFT_298403 [Trichoderma atroviride IMI
206040]
Length = 312
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 15/206 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + + +VE F +G ++K+ G+ F+E+++A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEVKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ G DF G RL V+ A G R R H RR+ +R+ +TGLP+
Sbjct: 58 VVPAFHGSDFMGERLTVQFARGARHREGGMGHERAPP-----RPRRTPHRMQITGLPNDT 112
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
SWQDLKD R++ DV +S+ RD +G G V++ D++ A++KLD EF+ A +
Sbjct: 113 SWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGREFKGARVQCL 171
Query: 180 VRVREYDHRRDGSQSPSRGRSYSRGR 205
V D + D R RS S GR
Sbjct: 172 V-----DTQPDMPPRDPRARSRSPGR 192
>gi|149063568|gb|EDM13891.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Rattus
norvegicus]
Length = 124
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 15/112 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D+RE+++EDLFYKYG I I+LK +P +AFV FE+ RDAEDAI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVP-----FAFVRFEDPRDAEDAIY 70
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTG 115
GR+GYD+ RLRVE GR R S + +RRS++RVLV+G
Sbjct: 71 GRNGYDYGQCRLRVEFPRAYGGRGGWPRASRNGP-----PTRRSDFRVLVSG 117
>gi|322694046|gb|EFY85887.1| pre-mRNA splicing factor [Metarhizium acridum CQMa 102]
Length = 314
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 124/263 (47%), Gaps = 32/263 (12%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARD 57
M++ S T LY+GNLP + + ++E F +G I + L G+ F+E+++ D
Sbjct: 1 MTTEVSNTRLYLGNLPRNATKADIEAHFATHGTGDITEVKLMN-----GFGFIEYKDPMD 55
Query: 58 AEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLP 117
A D + DG DF G RL V+ A G R R S S H R + +TGLP
Sbjct: 56 ARDVVP--DGSDFMGERLTVQFARGPRQRESG--FSGHERAPPRPRRTPHR--MQITGLP 109
Query: 118 SSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
+ SWQDLKD R+ G DV +S+ RD +G G V+Y D++ A+ KLD EF+
Sbjct: 110 NETSWQDLKDFARQPGLDVVYSETGRDSNG-RGFVEYETAADLRTAVDKLDGREFKGNRV 168
Query: 177 RAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSR----SRSQSKSPKAK 232
+ + RDG RGRS S G + +R Y R R ++ P
Sbjct: 169 QCIADTQPDMPPRDG-----RGRSRSPGGRRPYNNMPTRFDEYDRRGPPPRGYNRDPGPY 223
Query: 233 SSR-RSP------DRSRSRSASR 248
R RSP DR+R RS R
Sbjct: 224 GYRDRSPRREYYEDRARYRSPPR 246
>gi|254565225|ref|XP_002489723.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|238029519|emb|CAY67442.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|328350141|emb|CCA36541.1| Polyadenylate-binding protein 1-like [Komagataella pastoris CBS
7435]
Length = 329
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 24/169 (14%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS ++ L+V LPGD+R E++DLF K+GPI + + GYAFVE+EE DA
Sbjct: 1 MSDLSTSQLFVRPLPGDVRPEELQDLFGKFGPIKEVKIMR-----GYAFVEYEEGADASA 55
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
A+ + F L++E A ++R E RV VT +P S
Sbjct: 56 ALENLNNTPFGDQDLQIEFAK-----------------EKPSYAKRGENRVKVTNIPESI 98
Query: 121 SWQDLKDHMRRAGDVC--FSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
+WQDLKD + + D+ F+++ R T +++ N ++++ A++K++
Sbjct: 99 AWQDLKDFIAKEIDILPTFARLNRHDEPPTATLEFNNREELEAAVEKIN 147
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 90/163 (55%), Gaps = 25/163 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ Y
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAV-----Y 55
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+ +G L E R S +R+ G R+++R++V L S SWQDLKD
Sbjct: 56 ELNGKELCSE-----RSLSGPNRY---------GPPVRTDHRLVVENLSSRTSWQDLKDL 101
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
MR+AG+V F R + G+V++ + DMK+AI KLD +E
Sbjct: 102 MRKAGEVTFVDAHRP-TKNEGVVEFASRSDMKNAISKLDGTEL 143
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 21/178 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RE++++ F YG + DLK GY FVEFE+ RDA+DA+ +G
Sbjct: 4 VYIGKLSYHVREKDIQRFFGGYGKLMETDLK-----NGYGFVEFEDTRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR---------------GVSRRSEYRVLV 113
+ G R+ VE A G R G G R+EYR++V
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYGGGYGGFGGRSNSGYSSRSRSGRDKYGPPVRTEYRLIV 118
Query: 114 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD MR+AG+V ++ ++ + G++++ ++ DM+ A+ KLD ++
Sbjct: 119 ENLSSRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRSHSDMRRALDKLDVTDI 175
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 24/181 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP ++RER+VE LF +YG I + +K GY FVEF++ RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKLFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR------------------RSEYR 110
+F G R+RVE+A R R DR + G G R+ YR
Sbjct: 62 EFQGGRVRVEMARDPRERRGRDRDRGYERRGGGGGGYDRRDTRGDRGRRGNPPGPRTNYR 121
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
+ V L S SWQDLKD+ R AG++ ++ G G+V++ + + +AI D+ E
Sbjct: 122 ITVQNLSSRTSWQDLKDYFRAAGEITYTNAHTPRQG-EGVVEFASSRGLDYAIDHQDELE 180
Query: 171 F 171
Sbjct: 181 L 181
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 20/177 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRH-------------SSHSSGRGR-GVSRRSEYRVLVT 114
R+ +E A RGR S+S G R G R+E+R++V
Sbjct: 61 VLCSERVTIEHARNHRGRGGMMGGGGGGRYPNRFAYRQSNSGGNSRYGPPVRTEHRIIVE 120
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLK MR+AG+V + R G+V++ +Y DMK A+ KLD E
Sbjct: 121 NLSSRVSWQDLKGFMRKAGEVTYVDAHRSNR-NEGVVEFASYTDMKSALDKLDGVEL 176
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
+R LY+G +P D R +V+ F YG I +D ++ G+ FVEFE ++DAE+ ++
Sbjct: 2 TRRLYLGRIPTDARSEDVQKFFEGYGRI--VDCRVMT---GFGFVEFESSKDAEEVVQVF 56
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
+G F G + VE A R R DR R R++V+G+ SWQDL
Sbjct: 57 NGKAFMGAPILVEFAKENRPRRDDDRGYGGGGAYPPRARRPPGVRLIVSGISRDTSWQDL 116
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KD R AG++ F+ + RD G G+++Y + DD HA+K LD + R
Sbjct: 117 KDFGREAGNITFADIDRDVPG-QGVLEYMSRDDADHAVKTLDGKDLR 162
>gi|255936927|ref|XP_002559490.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584110|emb|CAP92139.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 301
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 18/206 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYG--PIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP ++ + ++E+ F +G I I L G+ F+E+++ DA
Sbjct: 1 MTEVSSTRLYLGNLPRNVTKSDIEEHFSSHGSGKITEIKLMN-----GFGFIEYDDQLDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + DG +F G RL V+ A G R + + S RR+ +R+ ++GLP
Sbjct: 56 RDIVP--DGSEFKGERLTVQFARGPRRKEA---FPGPSERNALPRPRRTIFRMQISGLPE 110
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
+ SWQDLKD R++G DV +S+ R+ G V++ +D+K A++KLD EF+ +
Sbjct: 111 T-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETANDLKTAVEKLDQREFKGSVVS 167
Query: 178 AYVRVREYDHRRDGSQSPSRGRSYSR 203
++ ++ R + P R RS R
Sbjct: 168 CVADIQSFEER--PMRDPYRSRSPPR 191
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 92/168 (54%), Gaps = 12/168 (7%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
A+R LY+G LP D R +V F YG I +D ++ G+ FVEFE RDAEDA+
Sbjct: 2 AARRLYLGRLPPDTRSEDVSKFFDGYGHI--VDCRVMT---GFGFVEFESTRDAEDALNH 56
Query: 65 RDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+G F+G + +E A + S R + + R R R R++V+G+ SWQD
Sbjct: 57 FNGKPFNGANIVIEFA-----KESRPRRDVYEADRPR-ARRPPGIRLIVSGVSRDTSWQD 110
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
LKD R AG+V ++ + RD G GI++Y +D A+++LD + R
Sbjct: 111 LKDFGREAGNVSYADIDRDHPG-EGILEYLTREDADRAVRELDGKDLR 157
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 28/185 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F +G + ++LK G+ FVEF++ RDA+DA+ +G
Sbjct: 5 VYIGRLSYQTRERDVERFFRGFGHLREVNLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 DFDGHRLRVELAHGG--RGRSSSDRHSSHSSGRGR--------------------GVSRR 106
D G R+ +E A G R R S S RG G R
Sbjct: 60 DLCGERVIIEHARGPVRRDRDSGGYRGSERDYRGDRGGGYGPPRRRGGGGGIDKYGPPTR 119
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
++ R++V L S SWQDLKD+MR+AG+V ++ ++ G+V++ Y DMK+A+ KL
Sbjct: 120 TDNRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKEHK-NEGVVEFATYSDMKNAMSKL 178
Query: 167 DDSEF 171
D +E
Sbjct: 179 DGTEI 183
>gi|260819154|ref|XP_002604902.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
gi|229290231|gb|EEN60912.1| hypothetical protein BRAFLDRAFT_114372 [Branchiostoma floridae]
Length = 289
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 95/182 (52%), Gaps = 25/182 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G LP RE++VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 5 VYIGRLPYHAREKDVERFFRGYGRIREINLK-----NGFGFVEFDDPRDADDAVYELNGK 59
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-------------------GVSRRSEY 109
+ G R+ VE A G R + G G R++Y
Sbjct: 60 ELCGERVIVENARGPARGGGGFRGGGYGYRPGWLDNGRGSGGGRGSDSRNRYGPPVRTDY 119
Query: 110 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
R++V L S SWQDLKD+MR+AG+V ++ + GIV++ Y DM++A++KLD +
Sbjct: 120 RLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKQNK-NEGIVEFATYRDMENALRKLDGT 178
Query: 170 EF 171
E
Sbjct: 179 EI 180
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 102/215 (47%), Gaps = 53/215 (24%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M +R +Y+G L RER+VE F YG + + LK GY FVEFE+ RDA+D
Sbjct: 236 MKNRMGTRVYIGRLSHHARERDVERFFKGYGRLRDVMLK-----NGYGFVEFEDYRDADD 290
Query: 61 AIRGRDGYDFDGHRLRVELAHGG-RGRSSSDRHSSH------------SSGRGRGVSRRS 107
A+ +G D G R+ VE A GG RG DR +S+ G R+
Sbjct: 291 AVYELNGKDLAGERVIVEHARGGPRG---DDRRNSYRDYPPARRSRGGGGRDKYGPPTRT 347
Query: 108 EYRVLVTGLPSSASWQ-------------------------------DLKDHMRRAGDVC 136
EYR++V L S SWQ DLKD+MR+AG+V
Sbjct: 348 EYRLIVENLSSRVSWQVSWFHCEDELGNHATTLTVGGAFRVQSTAVEDLKDYMRQAGEVT 407
Query: 137 FSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
++ ++ GIV++ +Y DMK+A+ KLD +E
Sbjct: 408 YADAHKEHK-NEGIVEFASYSDMKNAVSKLDGTEI 441
>gi|326471023|gb|EGD95032.1| pre-RNA splicing factor Srp2 [Trichophyton tonsurans CBS 112818]
Length = 317
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 31/192 (16%)
Query: 1 MSSRASRTLYVGNLPGD---------------IREREVEDLF--YKYGPIAHIDLKIPPR 43
MS +S LY+GNLP + + ++++E+ F + G I I L
Sbjct: 1 MSEVSSTRLYLGNLPRNADSKGHLFCLDSLPPVNKQDIEEHFGSHGTGKITEIKLMQ--- 57
Query: 44 PPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV 103
G+ F+E+E+A DA+D + DG DF G RL V+ A G R R S+
Sbjct: 58 --GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRRREPFPGPPERSAAP---R 110
Query: 104 SRRSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHA 162
RR+ YR+ +TGLP + SWQDLKD R++G DV +S+ RD G G V++ N +D++ A
Sbjct: 111 PRRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTA 167
Query: 163 IKKLDDSEFRNA 174
++KLD ++F+ +
Sbjct: 168 VEKLDGTDFKGS 179
>gi|388856974|emb|CCF49394.1| related to pre-mrna splicing factor srp55 [Ustilago hordei]
Length = 259
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 99/195 (50%), Gaps = 34/195 (17%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS+R +YVG LP D+R ++EDLF YG + + + + FVEFE RDAED
Sbjct: 1 MSTR----VYVGKLPADVRRGDIEDLFRDYGRLYDVRIM-----GTFGFVEFEHHRDAED 51
Query: 61 AIRGRDGYDFDGHRLRVELAH--------------------GGRGRSSSDRHSSHSSGRG 100
A++ DG +F G R+ V+ A GG GR R+ S +
Sbjct: 52 AVKDFDGKNFMGERIVVQHAKQSERRRPEPAGYGSDPYDRRGGGGREPPSRYGSSVAPPP 111
Query: 101 RGVSRR--SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGS-GTTGIVDYTNYD 157
R R ++R +V+ LP + SWQDLKD R G V F+ V D + G+++Y N D
Sbjct: 112 RREPRLRRGQFRCIVSNLPPNTSWQDLKDIGREHGSVSFADV--DAARPDEGVIEYDNRD 169
Query: 158 DMKHAIKKLDDSEFR 172
D + A+ K++ +E R
Sbjct: 170 DYERALDKIEGTELR 184
>gi|119596372|gb|EAW75966.1| splicing factor, arginine/serine-rich 6, isoform CRA_c [Homo
sapiens]
Length = 383
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 18/151 (11%)
Query: 38 LKIPPR------PPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGR------- 84
L PPR P Y FVEFE++RDA+DA+ +G + G R+ VE A G R
Sbjct: 61 LTTPPRLSGPRTAPRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYS 120
Query: 85 ---GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV 140
S +SGR + G R+EYR++V L S SWQDLKD MR+AG+V ++
Sbjct: 121 YGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADA 180
Query: 141 FRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
++ + G++++ +Y DMK A+ KLD +E
Sbjct: 181 HKERT-NEGVIEFRSYSDMKRALDKLDGTEI 210
>gi|380482542|emb|CCF41176.1| pre-mRNA splicing factor [Colletotrichum higginsianum]
Length = 312
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 102/175 (58%), Gaps = 8/175 (4%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + + +VE F +G ++K+ G+ F+E+++A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ DG DF G RL V+ A G R R + ++ R RR+ +R+ +TGLP+
Sbjct: 58 VVP--DGSDFMGERLTVQFARGTRHREGGS-AAGFNNERAPPRPRRTPHRMQITGLPTDT 114
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++ DV +S+ RDG+G G V++ D++ A++KLD EF+ +
Sbjct: 115 SWQDLKDFARQSSLDVVYSETGRDGNG-RGFVEFETAADLRTAVEKLDGREFKGS 168
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 107/233 (45%), Gaps = 67/233 (28%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLK------------IPPR----- 43
MS+R ++VG L +RER++E F KYG I + +K + R
Sbjct: 1 MSTR----VFVGGLTYRVRERDLEKFFRKYGRIKEVAMKNGFAFVYGRDKSLCQRDLERF 56
Query: 44 ------------PPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHG--------- 82
GY FVEF++ RDA+DA+ +G + G R+ VE A G
Sbjct: 57 FRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVERARGTPRGSDQWR 116
Query: 83 ------GRG---RSSSD--RHSSHSSGRGR-------------GVSRRSEYRVLVTGLPS 118
G G RS+ D RH S R G R+EYR+ V L S
Sbjct: 117 YGDSRGGYGDSRRSARDDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSS 176
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD+MR+AG+V ++ + G+V++ Y D+K+AI KLDD+E
Sbjct: 177 RVSWQDLKDYMRQAGEVTYADAHKQ-RRNEGVVEFATYSDLKNAIDKLDDTEL 228
>gi|156402923|ref|XP_001639839.1| predicted protein [Nematostella vectensis]
gi|156226970|gb|EDO47776.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
SR ++VG LP +R++E F +G I I+LK G+AFVEF++ARDA+DA+
Sbjct: 2 SREGGRVFVGRLPPRANDRDLEKFFKGFGRINDINLK-----QGFAFVEFDDARDADDAV 56
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHS--SHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ + G R+ VE AH RG S R R +EYR++V L + A
Sbjct: 57 YELNHKELLGERVSVEHAHPSRGGGGGGGRGFRDRSPRRDRYPPYNTEYRLIVENLSTRA 116
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQDLKD+MR+AG+V F+Q +D G G+ D++N DM +A+KKLD +E
Sbjct: 117 GWQDLKDYMRQAGEVTFTQCHKDRVG-EGVCDFSNESDMLYALKKLDGTEL 166
>gi|159163317|pdb|1WG4|A Chain A, Solution Structure Of Rrm Domain In Protein Bab31986
Length = 98
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 6/92 (6%)
Query: 104 SRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAI 163
+RRS++RVLV+GLP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A+
Sbjct: 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYAL 67
Query: 164 KKLDDSEFR-NAFSRAYVRVREYDHRRDGSQS 194
+KLDD++FR + +Y+RV Y R G S
Sbjct: 68 RKLDDTKFRSHEGETSYIRV--YPERSSGPSS 97
>gi|299753075|ref|XP_001833047.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
gi|298410132|gb|EAU88736.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
Length = 279
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 94/183 (51%), Gaps = 20/183 (10%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
SR LY+G LP D R +V F YG I ID ++ G+ FVEFE ++DAEDA+
Sbjct: 2 SRRLYLGRLPPDARSDDVSKFFEGYGRI--IDCRVMT---GFGFVEFESSKDAEDAVHQF 56
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
+G F G + VE A R R R + + R GV R++V+G+ SWQDL
Sbjct: 57 NGKPFMGTAIVVEFAKESRPR----REVAPRARRPPGV------RLIVSGISRDTSWQDL 106
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREY 185
KD R V F+ + RD G G+++Y + +D A+K LD E R VRV
Sbjct: 107 KDFGREVASVSFADIDRDVPG-QGVLEYLSREDADRAVKDLDGRELRGKL----VRVVLD 161
Query: 186 DHR 188
DHR
Sbjct: 162 DHR 164
>gi|392870838|gb|EJB12075.1| pre-RNA splicing factor Srp2, variant [Coccidioides immitis RS]
Length = 399
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 9/167 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+ L + +++VE+ F ++G D+K+ G+ F+E+E+A DA D + G
Sbjct: 106 FFAWTLLFPVTKQDVEEHFNQHGSGKITDIKLMS---GFGFIEYEDALDARDVVPAYHGT 162
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
DF G RL V+ A G R + + S S+ RR+ YR+ ++GLP + SWQDLKD
Sbjct: 163 DFKGSRLTVQFARGPRHKETFSGPSDRSNA---PRPRRTPYRMQISGLPET-SWQDLKDF 218
Query: 129 MRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
R++G DV +S+ RD G G V++ D+K AI+KLD EF+ +
Sbjct: 219 ARQSGLDVVYSETLRDHEG-RGFVEFETGADLKTAIEKLDGREFKGS 264
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 16/173 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+GNLP ++RER+VE +G I + +K GY FVEF++ RDA+D + DG
Sbjct: 7 VYIGNLPENVRERDVEKFLKDHGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR----------RSEYRVLVTGLPS 118
DF G R+RVE+A R R DR S G RG R ++ YRV+V L S
Sbjct: 62 DFQGGRIRVEMARDPRDRRDRDRGSDRRGGFDRGRDRGGRRGNPPGPKTNYRVVVENLSS 121
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD+ R AGD+ ++ G GIV++ + + +A+ ++ E
Sbjct: 122 RTSWQDLKDYFRAAGDITYTNAHTPRQG-EGIVEFASSKGLDYALDHQNELEL 173
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 92/170 (54%), Gaps = 23/170 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSHSSG--RGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR + G R + + ++ R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRLAVADLGNDRRKCSTCKNRNRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKL 164
>gi|343426008|emb|CBQ69540.1| related to pre-mrna splicing factor srp55 [Sporisorium reilianum
SRZ2]
Length = 248
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 30/192 (15%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS+R +Y+G LP D+R ++EDLF YG + + + + FVEFE RDAED
Sbjct: 1 MSTR----VYIGKLPADVRRGDIEDLFRDYGRLYDVRIMG-----SFGFVEFEHPRDAED 51
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGR--------------------SSSDRHSSHSSGRG 100
A++ DG +F G R+ V+ A G R + S R+ + R
Sbjct: 52 AVKDFDGKNFMGERILVQHAKSGERRRAEPAGYASDPYDRRGGARDAPSSRYGAPPPPRR 111
Query: 101 RGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMK 160
RR ++R +++ LP + SWQDLKD R G + F+ V + G ++Y N DD +
Sbjct: 112 EPRLRRGQFRCVISNLPPNTSWQDLKDIGREHGSISFADV-DPNNPDEGFIEYDNRDDYE 170
Query: 161 HAIKKLDDSEFR 172
A+ K++ E R
Sbjct: 171 RALDKIEGIELR 182
>gi|159163527|pdb|1X4C|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 2
Length = 108
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 66/90 (73%), Gaps = 9/90 (10%)
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
E RV+V+GLP S SWQDLKDHMR AGDVC++ V+RDG TG+V++ +DM +A++KLD
Sbjct: 15 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLD 71
Query: 168 DSEFR-NAFSRAYVRVREYDHRRDGSQSPS 196
+++FR + AY+RV + DG +SPS
Sbjct: 72 NTKFRSHEGETAYIRV-----KVDGPRSPS 96
>gi|310798588|gb|EFQ33481.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 312
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 100/177 (56%), Gaps = 12/177 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEAHFATHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + DG DF G RL V+ A G R R ++ R RR+ +R+ +TGLP+
Sbjct: 56 RDVVP--DGSDFMGERLTVQFARGTRHREGGS-APGFNNERAPPRPRRTPHRMQITGLPT 112
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++ DV +S+ RDG+G G V++ D++ A++KLD EF+ +
Sbjct: 113 DTSWQDLKDFARQSSLDVVYSETGRDGNG-RGFVEFETAADLRTAVEKLDGREFKGS 168
>gi|66360300|ref|XP_627232.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
gi|46228840|gb|EAK89710.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
Length = 416
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 121/246 (49%), Gaps = 20/246 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGNLP E++++D F K G I ++LK + F+E+E+ AE A R DG
Sbjct: 19 VFVGNLPPGYAEQDLKDFFSKVGEIKKLELKQ-----RFCFIEYEDETQAEAAHRELDGV 73
Query: 69 DFDGHRLRVE-----LAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
+F G + V+ + + ++ +++ GRG R+ +RV V L +ASW+
Sbjct: 74 EFGGQVIAVQPHDPMVRNKETNAANKPQYNRPLPSDGRGPPRK-HFRVCVFNLDDNASWR 132
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
DLKD+ R+ G+V +S VF G+V+Y ++MK A++++ + F R +
Sbjct: 133 DLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEEIPNLPFLGKSIRVEEDIG 192
Query: 184 EYDHRRDGSQSPSRGR----SYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSPD 239
+ D + R +S G + R+R R S SR R +S+SP RR P
Sbjct: 193 QLDRELAAANGYGAKRRSPPPFSSGPYNTGGRARGRYPSPSRFRMRSRSP-----RRDPY 247
Query: 240 RSRSRS 245
R RS
Sbjct: 248 DRRERS 253
>gi|119187025|ref|XP_001244119.1| hypothetical protein CIMG_03560 [Coccidioides immitis RS]
Length = 398
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 95/167 (56%), Gaps = 11/167 (6%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+ L + +++VE+ F ++G D+K+ G+ F+E+E+A DA D + DG
Sbjct: 107 FFAWTLLFPVTKQDVEEHFNQHGSGKITDIKLMS---GFGFIEYEDALDARDVVP--DGT 161
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
DF G RL V+ A G R + + S S+ RR+ YR+ ++GLP + SWQDLKD
Sbjct: 162 DFKGSRLTVQFARGPRHKETFSGPSDRSNA---PRPRRTPYRMQISGLPET-SWQDLKDF 217
Query: 129 MRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
R++G DV +S+ RD G G V++ D+K AI+KLD EF+ +
Sbjct: 218 ARQSGLDVVYSETLRDHEGR-GFVEFETGADLKTAIEKLDGREFKGS 263
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 12/169 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR------RSEYRVLVTGLPSSASW 122
+ R+ +E A R+S S R R R+E R++V L S SW
Sbjct: 61 ELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLSSRVSW 120
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
QDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 121 QDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYSDLKNAIEKLSGKEI 168
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 12/169 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR------RSEYRVLVTGLPSSASW 122
+ R+ +E A R+S S R R R+E R++V L S SW
Sbjct: 61 ELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLSSRVSW 120
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
QDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 121 QDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYSDLKNAIEKLSGKEI 168
>gi|320589309|gb|EFX01771.1| pre-RNA splicing factor [Grosmannia clavigera kw1407]
Length = 398
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 42/210 (20%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LY+GNLP ++ +VE F K+G +D+K+ G+ F+E+ +A DA D + G
Sbjct: 26 LYLGNLPRNVTRSDVESHFNKHGTGEILDIKLMN---GFGFIEYRDAMDARDVVPAFHGS 82
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSH--------------------------------- 95
DF G RL V+ A G RG
Sbjct: 83 DFMGERLTVQFARGRRGEGGGPGGGPGGGLGGGPNHGPGGGGLGHGPYGGGGGGGPGGGG 142
Query: 96 --SSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVD 152
S R RR+ +R+ +TGLP+ SWQDLKD RR+G +V FS+ R G G+ V+
Sbjct: 143 YNSHDRPPPRPRRTAHRMAITGLPNDTSWQDLKDFARRSGLEVVFSETNRFGDGS---VE 199
Query: 153 YTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+ + D+ AI+KLD++EFR+ V V
Sbjct: 200 FESAQDLATAIEKLDNTEFRDKIVTCSVGV 229
>gi|171682128|ref|XP_001906007.1| hypothetical protein [Podospora anserina S mat+]
gi|170941023|emb|CAP66673.1| unnamed protein product [Podospora anserina S mat+]
Length = 319
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 16/180 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ ++ LY+GNLP + + ++E F +G IA I L G+ F+E+++ DA
Sbjct: 1 MTEVSATRLYLGNLPRNATKADIEAHFSTHGTGDIAEIKLMN-----GFGFIEYKDPMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVS-----RRSEYRVLV 113
D + DG F G RL V+ A G R R ++ G S RR+ +R+ +
Sbjct: 56 RDVVP--DGSTFLGERLTVQFARGNRHRENNGGGGGGGGGFNNDRSSAPRPRRTPHRLQI 113
Query: 114 TGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
+GLP SWQDLKD R G DV +S+ R+GS + G V++ D++ A++KL++ +F+
Sbjct: 114 SGLPPDTSWQDLKDFARTPGLDVVYSETGRNGS-SEGFVEFETAADLRTAVEKLNERDFK 172
>gi|345309522|ref|XP_001517768.2| PREDICTED: serine/arginine-rich splicing factor 5-like, partial
[Ornithorhynchus anatinus]
Length = 251
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 87/164 (53%), Gaps = 23/164 (14%)
Query: 20 EREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRL---R 76
E++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y+ DG L R
Sbjct: 1 EKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----YELDGKELCSER 50
Query: 77 VELAHGGRGRSS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
V + H SDR SS + R R+E R++V L S SWQDLKD
Sbjct: 51 VTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKD 110
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 111 FMRQAGEVTFADAHR-PKLNEGVVEFASYSDLKNAIEKLSGKEI 153
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 12/169 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR------RSEYRVLVTGLPSSASW 122
+ R+ +E A R+S S R R R+E R++V L S SW
Sbjct: 61 ELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPPLRTENRLIVENLSSRVSW 120
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
QDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 121 QDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYSDLKNAIEKLSGKEI 168
>gi|402085268|gb|EJT80166.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 317
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLF--YKYGPIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + +V F + G I I L G+ F+E+E+ DA
Sbjct: 1 MTEVSSTRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG---RGRGVSRRSEYRVLVTG 115
D + G F G RL V+ A G R R + S R RR+ YR+ ++G
Sbjct: 56 RDVVPAFHGSQFMGERLTVQFARGSRNRDGGGGAGNGSGFSGERSAPRPRRTPYRMQISG 115
Query: 116 LPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
LP+ SWQDLKD R++ DV +S+ R +G G V++ D+ A+ LD EF+
Sbjct: 116 LPNDTSWQDLKDFARQSQLDVVYSETGRSNNGE-GFVEFETAADLATAVDALDGKEFKEK 174
Query: 175 FSRAYVRVREYDHRRDG--SQSPSRGRSYS 202
R + RD S+SP RSY+
Sbjct: 175 VVRCVANAQADPPVRDRGRSRSPPGRRSYA 204
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 29/186 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I ++LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLKN-----GFGFVEFDDPRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSS-----------SDRHSSHSSGRGRGVSR------------ 105
+ R+ +E A RGR S R SS+ G G
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGGGGRFSPRFSSYRQGSGDRRGGGGGGSSRYGPPV 120
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
R+E+R++V L S SWQDLKD MR+ G+V F R G+V++ ++ DMK+A+ K
Sbjct: 121 RTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNK-NEGVVEFASHSDMKNALDK 179
Query: 166 LDDSEF 171
LD ++
Sbjct: 180 LDGTDL 185
>gi|402085269|gb|EJT80167.1| hypothetical protein GGTG_00170 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLF--YKYGPIAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + +V F + G I I L G+ F+E+E+ DA
Sbjct: 1 MTEVSSTRLYLGNLPRQATKEDVASHFGAHGTGKITEIKLMN-----GFGFIEYEDMMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG---RGRGVSRRSEYRVLVTG 115
D + G F G RL V+ A G R R + S R RR+ YR+ ++G
Sbjct: 56 RDVVPAFHGSQFMGERLTVQFARGSRNRDGGGGAGNGSGFSGERSAPRPRRTPYRMQISG 115
Query: 116 LPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
LP+ SWQDLKD R++ DV +S+ R +G G V++ D+ A+ LD EF+
Sbjct: 116 LPNDTSWQDLKDFARQSQLDVVYSETGRSNNGE-GFVEFETAADLATAVDALDGKEFKEK 174
Query: 175 FSRAYVRVREYDHRRDG--SQSPSRGRSYS 202
R + RD S+SP RSY+
Sbjct: 175 VVRCVANAQADPPVRDRGRSRSPPGRRSYA 204
>gi|443899862|dbj|GAC77190.1| alternative splicing factor SRp55/B52/SRp75 [Pseudozyma antarctica
T-34]
Length = 260
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 31/192 (16%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS+R +YVG LP D+R +++DLF YG + + + + FVEFE RDAED
Sbjct: 1 MSTR----VYVGKLPPDVRRGDIDDLFRDYGRLQDVRIMG-----SFGFVEFEHPRDAED 51
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSS-----SDRHSSHSSGRGRGVSRR--------- 106
A++ DG +F G R+ V+ A G R +D + GR R
Sbjct: 52 AVKDFDGRNFMGERIVVQHAKSGERRREPAGYGADPYDRRGGPPGREPPSRYGAPPPRRE 111
Query: 107 -----SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGS-GTTGIVDYTNYDDMK 160
++R +V+ LP + SWQDLKD R G + F+ V D S G+++Y N DD +
Sbjct: 112 PRIRRGQFRCIVSNLPPNTSWQDLKDIGREHGSISFADV--DPSRPDEGVIEYDNRDDYE 169
Query: 161 HAIKKLDDSEFR 172
A+ K++ E R
Sbjct: 170 RALDKIEGIELR 181
>gi|308482317|ref|XP_003103362.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
gi|308260152|gb|EFP04105.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
Length = 201
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 57/172 (33%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M +R +YVGNLP D+R +E+ DLFYKYG + +IDLK R P +AFVEF + R+
Sbjct: 1 MVTRDETQIYVGNLPNDVRTKEIGDLFYKYGRVRYIDLKT-CRGPSFAFVEFSDHRN--- 56
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
G R+ +R+ VT LP
Sbjct: 57 -----------------------------------------GPQRKFNFRIRVTNLPRPT 75
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
W DLKD+M+ D+ F GIV++T+Y D+K+AI+K D +FR
Sbjct: 76 RWHDLKDYMQSIKDIVF-----------GIVEFTSY-DVKYAIRKFDGRKFR 115
>gi|451847680|gb|EMD60987.1| hypothetical protein COCSADRAFT_163394 [Cochliobolus sativus
ND90Pr]
Length = 340
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 95/175 (54%), Gaps = 13/175 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + G DF G RL V+ A G R R+ + RR+ YR+ + LP
Sbjct: 56 RDVVPAFHGSDFMGERLIVQFARGSRARNENFTPHERVP----PRPRRTPYRMRIANLPV 111
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKD R++G DV +S+V R+ G TG V+Y D+K A++KLD EF+
Sbjct: 112 ETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKTAVEKLDRREFK 165
>gi|453083473|gb|EMF11519.1| hypothetical protein SEPMUDRAFT_150428 [Mycosphaerella populorum
SO2202]
Length = 359
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 89/163 (54%), Gaps = 15/163 (9%)
Query: 22 EVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVEL 79
+VE+ F +G I I L G+ F+E+++A DA D + G +F G RL V+
Sbjct: 50 DVENHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPAFHGSEFMGERLVVQF 104
Query: 80 AHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFS 138
A G S+ R R RR+ +R+ +TGLP SWQDLKD R++G DV +S
Sbjct: 105 ARG----STRPREGFEHQPRMAPRPRRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYS 160
Query: 139 QVF--RDGSGT-TGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
+V RD +GT G V+Y D+ A++KLD+SEF+ A R
Sbjct: 161 EVNRERDPAGTGKGFVEYETAADLASAVEKLDNSEFKGATVRC 203
>gi|332858668|ref|XP_003317036.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 407
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 12/138 (8%)
Query: 45 PGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGR----------GRSSSDRHSS 94
P Y FVEFE++RDA+DA+ +G + G R+ VE A G R S
Sbjct: 98 PRYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSR 157
Query: 95 HSSGRGR-GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDY 153
+SGR + G R+EYR++V L S SWQDLKD MR+AG+V ++ ++ + G++++
Sbjct: 158 RTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEF 216
Query: 154 TNYDDMKHAIKKLDDSEF 171
+Y DMK A+ KLD +E
Sbjct: 217 RSYSDMKRALDKLDGTEI 234
>gi|194376808|dbj|BAG57550.1| unnamed protein product [Homo sapiens]
Length = 125
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 5/108 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP D+RE+++EDLFYKYG I I+LK +AFV FE+ RDAEDAI GR+GY
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNGY 75
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
D+ RLRVE R+ R GR +RRS++RVLV+G+
Sbjct: 76 DYGQCRLRVEFP-----RTYGGRGGWPRGGRNGPPTRRSDFRVLVSGM 118
>gi|330941512|ref|XP_003306066.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
gi|311316625|gb|EFQ85835.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 95/175 (54%), Gaps = 13/175 (7%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + G DF G RL V+ A G R R+ + RR+ YR+ + LP
Sbjct: 56 RDVVPAFHGSDFMGERLIVQFARGSRARNENFTPHERVP----PRPRRTPYRMRIANLPV 111
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKD R++G DV +S+V R+ G TG V+Y D+K A++KLD EF+
Sbjct: 112 ETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKAAVEKLDRREFK 165
>gi|325087601|gb|EGC40911.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 316
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 16/161 (9%)
Query: 18 IREREVEDLFYKY---GPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHR 74
+ ++E+ED F + G I I L G+ F+E+E+A DA+D + G DF G R
Sbjct: 32 VTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVPAFHGTDFKGER 86
Query: 75 LRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAG- 133
L V+ A G R + + S SS RR+ YR+ ++GLP + SWQDLKD R++G
Sbjct: 87 LTVQFARGPRHKETFSGPSDRSSA---PRPRRTIYRMQISGLPET-SWQDLKDFARQSGL 142
Query: 134 DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
DV +S+ DG G V++ D+K A++KLD EF+ +
Sbjct: 143 DVVYSETGHDGR---GFVEFETGSDLKTAVEKLDGREFKGS 180
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 23/180 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L +RER+VE F YG + + LK + FVEF+++RDAEDA+ +
Sbjct: 4 VYLGRLNSSVRERDVEKFFRDYGKLKEVTLK-----GTFGFVEFDDSRDAEDAVYDLNNK 58
Query: 69 DFDGHRLRVELAHG---GRGRSSSDRHSSHSSGRGRGVSR------------RSEYRVLV 113
+ G R+ VE A RGR S G R++YR+ +
Sbjct: 59 ELCGDRIIVEFARNRREARGRGDDRYGRSRGGRSSGGGGGGGPAAGYGSAPVRTDYRLYI 118
Query: 114 TGLPSSASWQDLKDHMRRAGD--VCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD++R D V ++ + G IV++ + DD+++AIKKLD++E
Sbjct: 119 NNLSSRVSWQDLKDYIRNKTDISVSYADAHKQSVG-QAIVEFDSKDDLRYAIKKLDNTEI 177
>gi|451996756|gb|EMD89222.1| hypothetical protein COCHEDRAFT_1158038 [Cochliobolus
heterostrophus C5]
Length = 338
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 96/175 (54%), Gaps = 15/175 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + DG DF G RL V+ A G R R+ + RR+ YR+ + LP
Sbjct: 56 RDVVP--DGSDFMGERLIVQFARGSRARNENFTPHERVPP----RPRRTPYRMRIANLPV 109
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKD R++G DV +S+V R+ G TG V+Y D+K A++KLD EF+
Sbjct: 110 ETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKTAVEKLDRREFK 163
>gi|157133042|ref|XP_001662753.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108870967|gb|EAT35192.1| AAEL012621-PA [Aedes aegypti]
Length = 342
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDA-IRGRDG 67
+YVG LP +RER++E F YG I +K GY FVEFE+ RDA+DA +
Sbjct: 6 VYVGGLPHGVRERDLERFFKGYGRTRDILIK-----NGYGFVEFEDYRDADDAPTQTHYI 60
Query: 68 YDFDGHRLRVELAHG-GRGRSSSDRHSSHSSGRGR-------------------GVSRRS 107
+ +R+ VE A G RG S H + R G R+
Sbjct: 61 FLLLIYRVTVEPARGTARGGGSRRDHDRYDRYDRRGGGGRYDKNRSNSRNSSRYGPPLRT 120
Query: 108 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
EYR+ V L S SWQDLKD+MR+AG+V ++ + G+V++ DMK AI KLD
Sbjct: 121 EYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQ-RKNEGVVEFATSSDMKTAIDKLD 179
Query: 168 DSEF 171
D+E
Sbjct: 180 DTEL 183
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 95/177 (53%), Gaps = 24/177 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G LPGDIRER+++ F K+G + I +K Y F+++E+ R+AEDA+
Sbjct: 28 IYIGKLPGDIRERDIDKAFSKFGHVREIAMK-----GNYCFLQYEKTREAEDAVYEMHDR 82
Query: 69 DFDGHRLRVELA-----HGGRGRS-------------SSDRHSSHSSGRGRGVSRRSEYR 110
F G R++VE A G R S SS SS R R +RS+YR
Sbjct: 83 SFFGERIQVEHARQPKEFGFRAPSRFGGSRGYGGYSRSSTYSSSRDYSRRRSPPQRSDYR 142
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
+ VT L + QDLK M++AGDV FS R G G+V++ + DM+ A+KKLD
Sbjct: 143 LSVTNLSTRCDAQDLKAVMQKAGDVVFSDAHRRRVG-EGVVEFASRKDMERALKKLD 198
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 12/169 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEF++ RDA+DA+ DG
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFDDPRDADDAVYELDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR------RSEYRVLVTGLPSSASW 122
+ R+ +E A R+S S R R R+E R++V L S SW
Sbjct: 61 ELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPPLRTENRLIVENLSSRVSW 120
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
QDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 121 QDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYSDLKNAIEKLSGKEI 168
>gi|189211717|ref|XP_001942187.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979386|gb|EDU46012.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 340
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 96/175 (54%), Gaps = 15/175 (8%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + + +VE F +G I I L G+ F+E+++A DA
Sbjct: 1 MTEVSSTRLYLGNLPRNATKADVEGHFQTHGTGEITEIKLMN-----GFGFIEYKDAMDA 55
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + DG DF G RL V+ A G R R+ + RR+ YR+ + LP
Sbjct: 56 RDVVP--DGSDFMGERLIVQFARGSRARNENFTPHERVPP----RPRRTPYRMRIANLPV 109
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
SWQDLKD R++G DV +S+V R+ G TG V+Y D+K A++KLD EF+
Sbjct: 110 ETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKAAVEKLDRREFK 163
>gi|391343504|ref|XP_003746049.1| PREDICTED: serine-arginine protein 55-like [Metaseiulus
occidentalis]
Length = 296
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G LP RE+++E F + G I I LK GYAFV+F RDA DA+ +G
Sbjct: 6 VFIGRLPRGSREQDIEKFFSRCGRIRGIMLKR-----GYAFVDFRTDRDASDAVHDMNGR 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
G R+ VE+A G + + S D+ SS R S EY+++V L S SW+D KD
Sbjct: 61 SMRGERMTVEIASGRQRKGSRDQKHRSSSARN-DASSNGEYQIVVENLSSRISWKDFKDM 119
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+RR GIV + + D+K AIKK + E
Sbjct: 120 IRREDIEVVHVDAHKLHKHQGIVKFRTHSDLKRAIKKFQNREI 162
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 13/169 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG I + LK G+ FV F++ RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 DFDGHRLRVELAHG------GRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
G R+ +E+A G G SSS +G+ YR++V L S +W
Sbjct: 62 SLCGERVMLEIAKGTPRGPGGESSSSSYYQQQQPRSSTKGIPNHG-YRLIVENLSSRVTW 120
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
QDLKD+MR+ G+V ++ R G+V++++ +MK+AI+KL+ +E
Sbjct: 121 QDLKDYMRQCGEVVYADANRY-RRNEGVVEFSSRKEMKYAIEKLNGTEI 168
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 89/177 (50%), Gaps = 28/177 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP ++RER+VE F +YG I + +K GY FVEF++ RDA+D + DG
Sbjct: 7 VYVGNLPENVRERDVEKFFKEYGRIREVVIK-----SGYGFVEFDDPRDADDVVNDMDGK 61
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR----------------------R 106
+F G R+RVE+A R R DR S S RG +
Sbjct: 62 EFQGGRVRVEMARDPRDRRGRDRGSDRGSDRGSDRGSDRRSSYDRRDSGRGRRGNPPGPK 121
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAI 163
+ YR+ V L S SWQDLKD+ R AGD+ ++ G G+V++ + D +
Sbjct: 122 TNYRITVQNLSSRTSWQDLKDYFRAAGDITYTNAHTPRQG-EGVVEFASSQDWNTPL 177
>gi|212526968|ref|XP_002143641.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
gi|210073039|gb|EEA27126.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 79/130 (60%), Gaps = 7/130 (5%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR 105
G+ F+E+E+A DA D + DG DF G RL V+ A G R + + + S S R
Sbjct: 3 GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRHKETFNGPSDRPSA---PRPR 57
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
R+ +R+ V+GLP+ SWQDLKD R++G DV +S+ R+ G G V++ ++ D+K A++
Sbjct: 58 RTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDG-RGFVEFESHADLKTAVE 116
Query: 165 KLDDSEFRNA 174
KLD E + +
Sbjct: 117 KLDGRELKGS 126
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 97/190 (51%), Gaps = 33/190 (17%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I ++LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREVNLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSS----------------SDRHSSHSSGRGR----------- 101
+ R+ +E A RGR S R SS+ G G
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGGGGGGGGGGRFSPRFSSYRQGSGGHGGGGGGSSRY 120
Query: 102 GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKH 161
G R+E+R++V L S SWQDLKD MR+AG+V F R G+V++ ++ DMK+
Sbjct: 121 GPPVRTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNK-NEGVVEFASHSDMKN 179
Query: 162 AIKKLDDSEF 171
AI KLD ++
Sbjct: 180 AIDKLDGTDL 189
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G+L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGHLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR------------RSEYRVLVTGL 116
+ R+ +E A RGR G G G R+E+R++V L
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGGGGYRYGPPVRTEHRLIVENL 120
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
S SWQDLKD MR+AG+V F R G+V++ + DMK AI K D +E
Sbjct: 121 SSRISWQDLKDMMRKAGEVTFVDAHRPNK-NEGVVEFASRSDMKSAISKFDGTEL 174
>gi|225556594|gb|EEH04882.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 18/161 (11%)
Query: 18 IREREVEDLFYKY---GPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHR 74
+ ++E+ED F + G I I L G+ F+E+E+A DA+D + DG DF G R
Sbjct: 32 VTKQEIEDHFNSHHGSGKITEIKLMS-----GFGFIEYEDAMDAKDVVP--DGTDFKGER 84
Query: 75 LRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAG- 133
L V+ A G R + + S SS RR+ YR+ ++GLP + SWQDLKD R++G
Sbjct: 85 LTVQFARGPRHKETFSGPSDRSSA---PRPRRTIYRMQISGLPET-SWQDLKDFARQSGL 140
Query: 134 DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
DV +S+ DG G V++ D+K A++KLD EF+ +
Sbjct: 141 DVVYSETGHDGR---GFVEFETGSDLKTAVEKLDGREFKGS 178
>gi|358387407|gb|EHK25002.1| hypothetical protein TRIVIDRAFT_145450 [Trichoderma virens Gv29-8]
Length = 311
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 99/181 (54%), Gaps = 12/181 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + +VE F +G ++K+ G+ F+E+++A DA D
Sbjct: 1 MTEVSSTRLYLGNLPRHATKADVEAHFATHGTGEITEVKLMN---GFGFIEYKDAMDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
+ DG DF G RL V+ A G R R H RR+ +R+ +TGLP+
Sbjct: 58 VVP--DGSDFMGERLTVQFARGTRHREGGMGHERAPP-----RPRRTPHRMQITGLPNDT 110
Query: 121 SWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY 179
SWQDLKD R++ DV +S+ RD +G G V++ D++ A++KLD EF+ + +
Sbjct: 111 SWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGREFKGSRVQCL 169
Query: 180 V 180
V
Sbjct: 170 V 170
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 29/163 (17%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 2 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 56
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
D G R+ VE A G R R S+ SGR S+ S+ +L L D+
Sbjct: 57 DLCGERVIVEHARGPR------RDGSYGSGR----SKHSKG-IL------------LSDY 93
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
MR+AG+V ++ + G G++++ +Y DMK A++KLD +E
Sbjct: 94 MRQAGEVTYADAHK-GRKNEGVIEFVSYSDMKRALEKLDGTEV 135
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 91/174 (52%), Gaps = 11/174 (6%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS+ ++R +YVG L ER++E F YG I I LK G+ FVEF++ RDA+D
Sbjct: 1 MSNMSAR-VYVGRLSYRASERDIEHFFRGYGRIRDIVLK-----NGFGFVEFDDPRDADD 54
Query: 61 AIRGRDGYDFDGHRLRVELAHGG----RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL 116
A+ +G + G R+ +E + G G DR G +++ YR++V L
Sbjct: 55 AVYELNGKELCGERVILEFSRRGPRSRMGFGGFDRFPPPRRESRYGPPQQTRYRLIVENL 114
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
S SWQDLKD MR AG+V F+ + GIV + DD++ A+ KL E
Sbjct: 115 SSRCSWQDLKDIMRTAGEVTFADAHKQHP-NEGIVCFLTRDDLERALDKLQGKE 167
>gi|241846316|ref|XP_002415562.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215509774|gb|EEC19227.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 355
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 23/180 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G+L +RER++E F +G I + LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VYIGHLSYRVRERDLEKFFRGFGKIREVLLK-----NGFGFVEFDDDRDADDAVYELNGR 60
Query: 69 DFDGHRLRVEL-----AHGGRGRSSSDRHSSHSSGRGRGVSR------------RSEYRV 111
+ DG R L + G R + H S R R R++YRV
Sbjct: 61 ELDGERYFTTLGRRAGSRNGTPRPGCAQLYGHVSNCFRLFGRATAPVNRYGPPTRTDYRV 120
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
++ L S SWQDLKD MR+ GDV ++ R G+V++ +Y DM+ AI KLD++E
Sbjct: 121 IIENLSSRISWQDLKDRMRQVGDVTYADAHRRKR-NEGVVEFASYSDMRRAIDKLDNTEL 179
>gi|389583241|dbj|GAB65976.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 728
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGN+ D RE +V F KYG I ++ K +AF+E+E+ AE AI+ +G
Sbjct: 140 IFVGNISPDAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKISHAEIAIKEENGQ 194
Query: 69 DFDGHRLRVELAHGG---------RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
F G L V+ H G RG ++S R +++ R++V +
Sbjct: 195 FFFGEELNVQPHHAGNYFHNRNDNRGFYPPPYARNYSPNRNENREKKNALRIVVKNVDEK 254
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGT-TGIVDYTNYDDMKHAIKKLDDSEF 171
ASWQDLKD R G V ++ + +D + GI++Y NY+++K A++ L+ +F
Sbjct: 255 ASWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYYNYENVKKAVEVLNGRKF 307
>gi|389640647|ref|XP_003717956.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
gi|351640509|gb|EHA48372.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
Length = 331
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + +V F +G ++K+ G+ F+E+++ DA D
Sbjct: 1 MTEVSSTRLYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMN---GFGFIEYDDPLDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG---------RGRGVSRRSEYRV 111
+ G F G RL V+ A G R R G R RR+ +R+
Sbjct: 58 VVPAFHGSTFMGERLTVQFARGTRNREGGSGGGGGGGGGGGGGYGGERSGPRPRRTAFRM 117
Query: 112 LVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
++GLP SWQDLKD R++ DV +S+ R+ +G G V++ D+ A++ LD E
Sbjct: 118 QISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNG-EGFVEFETAADLASAVEALDGKE 176
Query: 171 FRNAFSRAYVRVREYDHRRDGSQSPSRGRS 200
F++ R + RDG RGRS
Sbjct: 177 FKDKIVRCVANTQPDPPPRDG-----RGRS 201
>gi|336367304|gb|EGN95649.1| hypothetical protein SERLA73DRAFT_186792 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380022|gb|EGO21176.1| hypothetical protein SERLADRAFT_441550 [Serpula lacrymans var.
lacrymans S7.9]
Length = 324
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 92/187 (49%), Gaps = 28/187 (14%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPI---------------AHIDLKIPPRPPGYAFV 50
+R LY+G LP D R +V F YG I A+ L P G+ FV
Sbjct: 2 ARRLYLGRLPPDARSDDVAKFFDGYGRIVDCRVMTGSSDKRRSANPGLTAPS--SGFGFV 59
Query: 51 EFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV----SRR 106
EFE ++DAEDA+ +G F G + VE A + S R + G RG SRR
Sbjct: 60 EFENSKDAEDAVHHFNGKPFMGVNIVVEFA-----KESRPRRDVYEGGGERGFGSARSRR 114
Query: 107 SE-YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
R++V+G+ SWQDLKD R AG V F+ + RD G GI++Y + DD A+K
Sbjct: 115 PPGIRLIVSGISRDTSWQDLKDFGREAGSVSFADIDRDFPG-QGILEYLSRDDADRAVKD 173
Query: 166 LDDSEFR 172
LD + R
Sbjct: 174 LDGKDLR 180
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG+L RER+VE F YG I I LK G+ FVEFE+ RDA+DAI +G
Sbjct: 6 VFVGHLSSRARERDVEKFFKGYGRIREIHLK-----NGFGFVEFEDHRDADDAIYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR---GVSRRSEYRVLVTGLPSSASWQDL 125
+ R+ +E A RGR + S+ S G G R+E+R++V L S SWQDL
Sbjct: 61 ELCDERVTIEHARARRGRGRFAQRFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDL 120
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHA 162
KD MR+AG+V + R+ G+V++ +Y D++
Sbjct: 121 KDVMRKAGEVTYVDAHRNNR-NEGVVEFASYSDIEEC 156
>gi|389640645|ref|XP_003717955.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
gi|351640508|gb|EHA48371.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
Length = 330
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + +V F +G ++K+ G+ F+E+++ DA D
Sbjct: 1 MTEVSSTRLYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMN---GFGFIEYDDPLDARD 57
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG---------RGRGVSRRSEYRV 111
+ DG F G RL V+ A G R R G R RR+ +R+
Sbjct: 58 VVP--DGSTFMGERLTVQFARGTRNREGGSGGGGGGGGGGGGGYGGERSGPRPRRTAFRM 115
Query: 112 LVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
++GLP SWQDLKD R++ DV +S+ R+ +G G V++ D+ A++ LD E
Sbjct: 116 QISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNG-EGFVEFETAADLASAVEALDGKE 174
Query: 171 FRNAFSRAYVRVREYDHRRDGSQSPSRGRS 200
F++ R + RDG RGRS
Sbjct: 175 FKDKIVRCVANTQPDPPPRDG-----RGRS 199
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 129/242 (53%), Gaps = 28/242 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRH------------SSHSSGRGR-GVSRRSEYRVLVTG 115
R+ +ELA RGR S+S G R G R+E+R++V
Sbjct: 61 VLCNERVTIELARNRRGRGGMMGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVEN 120
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAF 175
L S SWQDLKD MR+AG+V + R G+V++ +Y DMK A+ KLD E
Sbjct: 121 LSSRVSWQDLKDFMRKAGEVTYVDAHRSNR-NEGVVEFASYSDMKSALDKLDGVELSG-- 177
Query: 176 SRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSR 235
R+ D + SR RS SR RS S+S+SR +S SRSRS+S++P+ K S+
Sbjct: 178 -------RKIKLTEDSKKHRSRSRSRSRSRSRSKSKSRGSSKSASRSRSKSRTPERKYSQ 230
Query: 236 RS 237
++
Sbjct: 231 KN 232
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR------------------RSEYR 110
+ R+ +E A RGR G G G R+++R
Sbjct: 61 ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGYRQSRSSGSSRYGPPVRTDHR 120
Query: 111 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
++V L S SWQDLKD MR+AG+V F R + G+V++ + DMK+AI KLD +E
Sbjct: 121 LVVENLSSRTSWQDLKDLMRKAGEVTFVDAHRP-TKNEGVVEFASRSDMKNAISKLDGTE 179
Query: 171 F 171
Sbjct: 180 L 180
>gi|221055067|ref|XP_002258672.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808742|emb|CAQ39444.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 837
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 15/173 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGN+ + RE +V F KYG I ++ K +AF+E+E+ AE AI+ +G
Sbjct: 311 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKTSHAEIAIKEENGQ 365
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHS---------SHSSGRGRGVSRRSEYRVLVTGLPSS 119
F G L V+ H G ++ + + ++S R +++ R+++ +
Sbjct: 366 LFFGEELNVQPHHAGNYFNNRNDNRNYYPPTYGRNYSPNRNEIREKKNALRIVIRNVDEK 425
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGT-TGIVDYTNYDDMKHAIKKLDDSEF 171
ASWQDLKD R G V ++ +F+D + GI++Y NY+++K A++ L+ +F
Sbjct: 426 ASWQDLKDFGRDIGSVNYANIFQDENKERFGIIEYYNYENVKKAVEVLNGRKF 478
>gi|355721871|gb|AES07404.1| splicing factor SRp55-1 [Mustela putorius furo]
Length = 250
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 12/136 (8%)
Query: 47 YAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGR----------GRSSSDRHSSHS 96
Y FVEFE++RDA+DA+ +G + G R+ VE A G R S +
Sbjct: 1 YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRXGGGGYSSRRT 60
Query: 97 SGRGR-GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
SGR + G R+E+R++V L S SWQDLKD MR+AG+V ++ ++ + G++++ +
Sbjct: 61 SGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERT-NEGVIEFRS 119
Query: 156 YDDMKHAIKKLDDSEF 171
Y DMK A+ KLD +E
Sbjct: 120 YSDMKRALDKLDGTEI 135
>gi|432885940|ref|XP_004074826.1| PREDICTED: serine/arginine-rich splicing factor 9-like isoform 1
[Oryzias latipes]
Length = 117
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 11/113 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+Y+GNLP D++ER++EDLF+KYG I I+LK IP +AF+ FE+ RDA+DA+
Sbjct: 6 IYIGNLPIDVQERDIEDLFFKYGKIREIELKNNRGTIP-----FAFIRFEDPRDADDAVY 60
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG-VSRRSEYRVLVTG 115
GR+GY + +LRVE G+ + G +RRSE+RV+VTG
Sbjct: 61 GRNGYVYGNSKLRVEYPRSTGGKPTPMGPGGAGPRGRFGPPTRRSEFRVIVTG 113
>gi|403221560|dbj|BAM39693.1| uncharacterized protein TOT_010001366 [Theileria orientalis strain
Shintoku]
Length = 458
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 20/187 (10%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
+ SR +T +++GNL G++ + E+ F +GPI ID + +AFV+F ++DAE
Sbjct: 239 LPSRYHKTKVFIGNLSGEVTQDELTAKFSSFGPINRIDFRR-----KFAFVDFVRSKDAE 293
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
AIR G L+V+ H + + S R + Y++ VT L S
Sbjct: 294 TAIREMHNKLIWGSWLKVQ-PHIEQQKKLSAREP------------KPGYQITVTNLDQS 340
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRA 178
SWQDLKD R+AG+V ++ + G+ G++++TN + +++A+K L+ + N
Sbjct: 341 VSWQDLKDFARQAGEVNYASIIIKGNKRFGLIEFTNDESVQNALKDLNGKKIDVNKLELI 400
Query: 179 YVRVREY 185
+V V E+
Sbjct: 401 HVPVSEF 407
>gi|71034173|ref|XP_766728.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353685|gb|EAN34445.1| hypothetical protein TP01_1207 [Theileria parva]
Length = 543
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++GNL GD+ + E+ F +GPI ID + +AF+++ ++DAE AIR
Sbjct: 362 IFIGNLSGDVTQEELTSKFSSFGPINRIDFRR-----KFAFIDYVRSKDAESAIREMHNK 416
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
G L+V+ H + + S R S +++ V+ L S SWQDLKD
Sbjct: 417 FIWGSYLKVQ-PHIDQNKKLSSRDPKPS------------FQITVSNLDQSVSWQDLKDF 463
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
R+AGDV ++ + G G+++YTN + +++A+K+L+
Sbjct: 464 GRQAGDVHYTSIIIKGDRRFGLIEYTNEESVQNAMKELN 502
>gi|156086366|ref|XP_001610592.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797845|gb|EDO07024.1| RNA recognition motif containing protein [Babesia bovis]
Length = 382
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 19/160 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGNL G + E ++ + F K+GPI ID + +AFV+F ++RDAE A+R +
Sbjct: 176 VFVGNLDGKVSEEDLTNAFSKFGPINKIDYRR-----NFAFVDFVKSRDAEVAMREMNER 230
Query: 69 DFDGHRLRVELAHGGRG-RSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
G +L+V + H R RS ++R +S + V L +SASWQDLKD
Sbjct: 231 VLLGTKLKV-VPHSERSKRSETNREPDFAS------------QATVLNLDNSASWQDLKD 277
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
R+AG+V ++ V G+V++T+ MK A+++L+
Sbjct: 278 FARQAGEVVYASVIIRDQKRYGLVEFTSPKTMKAAVEQLN 317
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 13/168 (7%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
T+++G L R++++ED F KYG + I L+ Y FV+F++ RDAEDAI+ DG
Sbjct: 6 TVFIGGLSDRARDKDIEDFFDKYGKVTQIRLR-----DRYGFVDFDDRRDAEDAIKDLDG 60
Query: 68 YDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR--------RSEYRVLVTGLPSS 119
G R+R+ELA+ RG S G RG R+ + + V L S
Sbjct: 61 SSLCGERVRLELANRSRGSRRSGSRDRGRRGGDRGGDERRGSNRPHRTRFTLEVENLSSR 120
Query: 120 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
SW DLKD MR+AG+V ++ + G V + N +D++ A KK D
Sbjct: 121 VSWADLKDMMRKAGEVTYTDAHQRMGKNRGEVCFANSEDLRAAYKKFD 168
>gi|19115482|ref|NP_594570.1| mRNA export factor Srp2 [Schizosaccharomyces pombe 972h-]
gi|26399937|sp|P78814.2|SRP2_SCHPO RecName: Full=Pre-mRNA-splicing factor srp2
gi|2749972|gb|AAC39357.1| putative pre-mRNA splicing factor [Schizosaccharomyces pombe]
gi|6013092|emb|CAB57400.1| mRNA export factor Srp2 [Schizosaccharomyces pombe]
Length = 365
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L+VG +P ++ D F YG I L G+ FVE E+ARDA D + G
Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+F G R+ VE A G R R + R S+ S RR+ +R++V L SWQDLKD
Sbjct: 61 EFMGSRIVVEPARGERRRRENFRESAASK---YPRPRRTGFRLIVENLSEDVSWQDLKDV 117
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
MR+AG+ F+ R+ G G+V+++ +DM++A+ L+
Sbjct: 118 MRKAGEPTFTDAHRENPG-AGVVEFSTEEDMRNALTSLN 155
>gi|1749534|dbj|BAA13825.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L+VG +P ++ D F YG I L G+ FVE E+ARDA D + G
Sbjct: 2 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-----GFGFVEVEDARDARDIVNDFQGK 56
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+F G R+ VE A G R R + R S+ S RR+ +R++V L SWQDLKD
Sbjct: 57 EFMGSRIVVEPARGERRRRENFRESAASK---YPRPRRTGFRLIVENLSEDVSWQDLKDV 113
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLD 167
MR+AG+ F+ R+ G G+V+++ +DM++A+ L+
Sbjct: 114 MRKAGEPTFTDAHRENPG-AGVVEFSTEEDMRNALTSLN 151
>gi|268533694|ref|XP_002631976.1| Hypothetical protein CBG10243 [Caenorhabditis briggsae]
Length = 545
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 16/179 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRP-PGYAFVEFEEARDAEDAIRGRDG 67
+++GNLP DI E + D F G I +ID+K PGY F+EF + DAE A++ R+G
Sbjct: 173 IFLGNLPTDIDEDLLRDFFKTSGEIKYIDVKKGKAGRPGYGFMEFVKLEDAEKAVKTRNG 232
Query: 68 YDFDGHRLRVELAH-------GGRGRSSSDRHSSHSSGRGRGVSR-RSEYRVLVTGLPSS 119
+ +RVE + GG + +S RGRG + RS +RV V P S
Sbjct: 233 FPICDKFIRVEFSTSGGPRGPGGMVLREGEISEEYSVARGRGGPQLRSVHRVYVDNCPPS 292
Query: 120 ASWQDLKDHMRRAGD-----VCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
+WQD+KD R D VCFS + + V++ +D+ AI+ + + N
Sbjct: 293 TTWQDIKDLFRGKNDPTGIEVCFSAI--NPIQRRAFVEFRLKEDVAKAIRLFHNKPYIN 349
>gi|342876767|gb|EGU78325.1| hypothetical protein FOXB_11186 [Fusarium oxysporum Fo5176]
Length = 1835
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR 105
G+ F+E+++ DA D + G DF G RL V+ A G R R + ++ R R
Sbjct: 1568 GFGFIEYKDPMDARDVVPAFHGSDFMGERLTVQFARGSRHREGGFGNHERTAPR----PR 1623
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
R+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD +G G V++ D++ A++
Sbjct: 1624 RTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVE 1682
Query: 165 KLDDSEFR 172
KLD EF+
Sbjct: 1683 KLDGREFK 1690
>gi|221042258|dbj|BAH12806.1| unnamed protein product [Homo sapiens]
Length = 143
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Query: 101 RGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMK 160
RG + ++ R+ V LP SWQDLKDHMR AGDVC++ V+RDG TG+V++ +DM
Sbjct: 8 RGPAGNNDCRIYVGNLPPGGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMT 64
Query: 161 HAIKKLDDSEFR-NAFSRAYVRVR 183
+A++KLD+++FR + AY+RV+
Sbjct: 65 YAVRKLDNTKFRSHEGETAYIRVK 88
>gi|261194216|ref|XP_002623513.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
gi|239588527|gb|EEQ71170.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
Length = 258
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 10/130 (7%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR 105
G+ F+E+E+A DA+D + DG DF G RL V+ A G R + + S SS R
Sbjct: 3 GFGFIEYEDAMDAKDVVP--DGTDFKGERLTVQFARGPRHKETFSGPSDRSSA---PRPR 57
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
R+ YR+ ++GLP + SWQDLKD R++G DV +S+ DG G V++ D+K A++
Sbjct: 58 RTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHDGR---GFVEFETGSDLKTAVE 113
Query: 165 KLDDSEFRNA 174
KLD EF+ +
Sbjct: 114 KLDGREFKGS 123
>gi|124804016|ref|XP_001347876.1| alternative splicing factor ASF-1 [Plasmodium falciparum 3D7]
gi|23496128|gb|AAN35789.1| alternative splicing factor ASF-1 [Plasmodium falciparum 3D7]
Length = 200
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 22/176 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPG--YAFVEFEEARDAEDAIRGRD 66
LYVGN+PG +E+ +F +YG I+ ID+K G YAF+E+E + AE I+ R+
Sbjct: 11 LYVGNIPGSATRQELIKIFEEYGKISDIDIKYNRNSNGTNYAFIEYENPKSAEKTIQKRN 70
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
G F G+ L+VE + + R +D + RSEYRV+V P ++++K
Sbjct: 71 GKKFKGYMLKVEYSIEKKNRDLNDIY-------------RSEYRVVVKHFPR--FFKNIK 115
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+ + RAG V + + +D I +Y + + M AI LD + + N+ + YVRV
Sbjct: 116 EFLSRAGKVLY--IHKDNGLI--IAEYEDKESMIKAISTLDRTIY-NSKRKVYVRV 166
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 136/268 (50%), Gaps = 38/268 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RER+VE F YG I I+LK G+ FVEF++ RDA+DA+ +G
Sbjct: 6 VFIGRLSPHARERDVEKFFKGYGRIREINLK-----NGFGFVEFDDHRDADDAVYELNGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRH---------------SSHSSGRGR-GVSRRSEYRVL 112
R+ +E A RGR S+S G R G R+E+R++
Sbjct: 61 VLCNERVTIEHARNRRGRGGMMGGGGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRII 120
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
V L S SWQDLKD MR+AG+V + R G+V++ +Y DMK+A+ KLD E
Sbjct: 121 VENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNR-NEGVVEFASYTDMKNALDKLDGVELS 179
Query: 173 NAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAK 232
R+ D + SR RS S RS S+S+SR +S SRSRS+S++P+ K
Sbjct: 180 G---------RKIKLTEDSKKRRSRSRSRSHSRSRSKSKSRGSSKSASRSRSKSRTPERK 230
Query: 233 SSRRSPDRSRSRSASRSRSGSKPRSLSR 260
S+++ S++ G PR+ R
Sbjct: 231 YSQKN-------SSAEPAQGLSPRAAKR 251
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RE +VE F YG I + LK G+ FV F++ RDA+DAI +G
Sbjct: 7 VYIGRLSHRARENDVEHFFRGYGKINDLMLK-----NGFGFVIFDDERDADDAIHDLNGK 61
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRG--------------RGVSRRSEYRVLVT 114
G R+ +E+A G DR S S +G+ YR++V
Sbjct: 62 SLCGERVMLEIAKGTPRGPGGDRRESSSRRSSSSSYYQQQQPRSSTKGIPNHG-YRLIVE 120
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S +WQDLKD+MR+ G+V ++ R G+V++++ +MK+AI+KL+ +E
Sbjct: 121 NLSSRVTWQDLKDYMRQCGEVVYADANRY-RRNEGVVEFSSRKEMKYAIEKLNGTEI 176
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+GNL + + E+EDLF KYGP+ +I I PPG+AF+E+E+ RDAEDA+RG DG
Sbjct: 13 VYIGNLKSNANKYEIEDLFTKYGPLKNI--WIARNPPGFAFIEYEDPRDAEDAVRGLDGT 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRG 102
G R+ V+++ G R R S H SS RG
Sbjct: 71 RCCGSRIIVQMSTGKRSRDKSPVHRGRSSPPRRG 104
>gi|327284522|ref|XP_003226986.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 195
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G+L +R +E F YG I +DLK GY F+EF + DA+DA+ +G
Sbjct: 4 VYIGHLSNQAHKRNMEP-FKGYGKIVEVDLK-----NGYGFLEFGDVCDADDAVHELNGK 57
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRG-----RGVSRRSEYRVLVTGLPSSASWQ 123
D G + VE G R SS S R G +EYR++ L +WQ
Sbjct: 58 DLCGDHVIVEHTWGPRCDSSYSSGRSGYGYRRSGRDKNGPPTHTEYRLIDENLTGCCNWQ 117
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
DLKD+M +AG+V ++ +G G++++ +Y DMK A++ LD +E
Sbjct: 118 DLKDYMHQAGEVTYADA-HNGRKNEGVIEFKSYSDMKRALENLDGTEVN 165
>gi|290562259|gb|ADD38526.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 92/173 (53%), Gaps = 19/173 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D ++ D+F KY D+K+ R +AF+EF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSDIRDIFSKYRD--RFDMKLKTR---FAFIEFDYHRDADHAVDNLDGL 73
Query: 69 DFDGHRLRVELAHGGRGRSSSDRH-----SSHSSGRGRGVSRR-----SEYRVLVTGLPS 118
F G R+ VE+A G R ++D++ +H + V R ++Y++LV L +
Sbjct: 74 TFRGRRISVEVARGPR---TADKYRFKGGLNHEPVQATWVKRYGTPEITKYKILVKNLST 130
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQDLKD M++AG V ++ ++ G+V ++N + M AI +D +
Sbjct: 131 RIEWQDLKDLMKKAGTVTYALAHKNNMH-EGMVCFSNEEGMLKAIDIFNDYDL 182
>gi|55824572|gb|AAV66406.1| splicing factor arginine/serine-rich protein 5 [Macaca
fascicularis]
Length = 208
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 30 YGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRL---RVELAHGGRGR 86
YG I IDLK G+ FVEFE+ RDA+DA+ Y+ DG L RV + H
Sbjct: 3 YGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----YELDGKELCSERVTIEHARARS 52
Query: 87 SS-------SDRHSSH--SSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCF 137
SDR SS + R R+E R++V L S SWQDLKD MR+AG+V F
Sbjct: 53 RGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTF 112
Query: 138 SQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+ R G+V++ +Y D+K+AI+KL E
Sbjct: 113 ADAHR-PKLNEGVVEFASYGDLKNAIEKLSGKEI 145
>gi|255564609|ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 259
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 113/251 (45%), Gaps = 25/251 (9%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
+R ++VGN + R+ E+E LF KYG + +D+K G+AFV FE+ RDA DAIRG
Sbjct: 2 ARPIFVGNFEFETRQSELERLFSKYGRVERVDMK-----SGFAFVYFEDERDAADAIRGL 56
Query: 66 DGYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL-PSSASW 122
D F D +L VE A G RGR H G ++R + V P
Sbjct: 57 DNISFGYDRRKLSVEWARGERGR--------HRDGSRSMANQRPTKTLFVINFDPIHTRV 108
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+D+K H R G+V ++ R+ V + +D A++ ++ + +
Sbjct: 109 EDIKRHFERYGEVLHVRIRRN----FAFVQFETQEDATKALECTHMTKILDRVVSVEYAL 164
Query: 183 REYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSS---RRSPD 239
R+ R D S SP RG Y GRS S R Y R+RS S RRSP+
Sbjct: 165 RDDSERGDKSDSPRRGSHY--GRSPSPVYRRRPSPDYGRARSPVYDKYNGPSYDRRRSPE 222
Query: 240 RSRSRSASRSR 250
R +S R
Sbjct: 223 YGRDQSPEYGR 233
>gi|119491909|ref|XP_001263449.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
gi|119411609|gb|EAW21552.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
Length = 258
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 19/164 (11%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSS----SDRHSSHSSGRGR 101
G+ F+E+E+A DA D + DG DF G RL V+ A G R + + +DR +
Sbjct: 3 GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKENFPGPTDRPNMPRP---- 56
Query: 102 GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMK 160
RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R+ G V++ D+K
Sbjct: 57 ---RRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETAADLK 110
Query: 161 HAIKKLDDSEFRNAFSRAYVRVREYDHR--RDGSQSPSRGRSYS 202
AI KLD EF+ + ++ +D R RD +S S RSY
Sbjct: 111 TAIDKLDGREFKGSRVSCVADIQPHDDRIFRDPYRSRSPRRSYP 154
>gi|156096635|ref|XP_001614351.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803225|gb|EDL44624.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 778
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGN+ + RE +V F KYG I ++ K +AF+E+E+ AE AI+ +G
Sbjct: 227 IFVGNISPEAREEDVRRKFLKYGDIVNMQWKTR-----FAFIEYEKTSHAEIAIKEENGQ 281
Query: 69 DFDGHRLRVELAHGGR-GRSSSDRHS-------SHSSGRGRGVSRRSEYRVLVTGLPSSA 120
F G L V+ H G + SD S ++S R +++ R++V + A
Sbjct: 282 FFFGEELNVQPHHAGNYFHNRSDNRSFYPPYGRTYSPNRNESREKKNALRIVVKNIDEKA 341
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTT-GIVDYTNYDDMKHAIKKLDDSEF 171
SWQDLKD R G V ++ + +D + GI++Y N + +K A++ L+ +F
Sbjct: 342 SWQDLKDFGRDVGSVNYANIIQDDNKERFGIIEYYNSETVKKAVEVLNGRKF 393
>gi|340939264|gb|EGS19886.1| splicing factor srp2-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 307
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 16/176 (9%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
M++ S T LY+GNLP + +VE F K+G ++KI G+ F+E+++ DA
Sbjct: 1 MTTEVSSTRLYLGNLPKHATKADVEAHFSKHGTGEITEIKIMN---GFGFIEYKDPMDAR 57
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
D + G F G RL V+ A G R R +++ + + RR+ +R+ +TGLP
Sbjct: 58 DVVPAFHGSMFMGERLTVQFARGNRHRDTANGYGHERAPP---RPRRTPHRMEITGLPDG 114
Query: 120 ASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQ AG DV +++ R G+ GIV++ DM+ AI+KLD EF+N+
Sbjct: 115 CSWQ--------AGVDVVYTETSRRGNSWEGIVEFETPADMRTAIEKLDGREFKNS 162
>gi|146323402|ref|XP_754610.2| pre-RNA splicing factor Srp2 [Aspergillus fumigatus Af293]
gi|129558308|gb|EAL92572.2| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
Af293]
gi|159127623|gb|EDP52738.1| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
A1163]
Length = 272
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 90/164 (54%), Gaps = 19/164 (11%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSS----SDRHSSHSSGRGR 101
G+ F+E+E+A DA D + DG DF G RL V+ A G R + + DR +
Sbjct: 18 GFGFIEYEDAMDARDVVP--DGSDFKGERLTVQFARGPRRKENFPGPPDRPNMPRP---- 71
Query: 102 GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMK 160
RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R+ G V++ D+K
Sbjct: 72 ---RRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETAADLK 125
Query: 161 HAIKKLDDSEFRNAFSRAYVRVREYDHR--RDGSQSPSRGRSYS 202
AI KLD EF+ + ++ +D R RD +S S RSY
Sbjct: 126 TAIDKLDGREFKGSRVSCVADIQPHDDRIFRDPYRSRSPRRSYP 169
>gi|353241704|emb|CCA73501.1| related to pre-mrna splicing factor srp55 [Piriformospora indica
DSM 11827]
Length = 194
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 13/168 (7%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
SR LYVG LP D+ +V F + +D +I G+ F+EF+ + D + A+R
Sbjct: 2 SRRLYVGKLPPDVNSEDVRRFFEDEARVKVVDCRIMT---GFGFIEFDSSEDMDTALR-L 57
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
DG+DF G + V++A R R SSGR +GV+ V+V+ + SWQDL
Sbjct: 58 DGHDFQGQPILVQVAREKPPRREPPREM-RSSGRRQGVT------VIVSNVSRDVSWQDL 110
Query: 126 KDHMRRA-GDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KD R A G V FS + RD GI++Y ++ + A+++LD E R
Sbjct: 111 KDFGREAGGGVIFSDIDRD-VPNQGILEYYTAEEAERAVRELDGRELR 157
>gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 151
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 77/145 (53%), Gaps = 16/145 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEF++ RDAEDA+ DG
Sbjct: 6 IFIGRLSPTAREKDVERFFKGYGRIRDIDLK-----KGFGFVEFDDPRDAEDAVYELDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSS---------SDRHSSHS-SGRGRGVS-RRSEYRVLVTGLP 117
+ R+ +E A SDR+ S SGR R R+E R++V L
Sbjct: 61 ELCNERVTIEHARVRLRGGRGRTWTGGRFSDRYGRGSQSGRSRNPPPVRTENRLIVENLS 120
Query: 118 SSASWQDLKDHMRRAGDVCFSQVFR 142
S SWQDLKD MR+AG+V F+ R
Sbjct: 121 SRVSWQDLKDFMRQAGEVTFADAHR 145
>gi|224130604|ref|XP_002320882.1| predicted protein [Populus trichocarpa]
gi|222861655|gb|EEE99197.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 115/252 (45%), Gaps = 26/252 (10%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VGN + R+ E+E LF KYG + +D+K G+AFV FE+ RDA DAIRG D
Sbjct: 1 RPIFVGNFEQETRQSELERLFRKYGRVERVDMK-----SGFAFVYFEDDRDAADAIRGLD 55
Query: 67 G--YDFDGHRLRVELAH---GGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL-PSSA 120
+ +D RL VE A G RGR H G V++R + V P
Sbjct: 56 NIPFGYDRRRLSVEWARVYAGERGR--------HRDGPRSTVNQRPTKTLFVINFDPIHT 107
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
+D+K H R G+V ++ R+ V + +D A+++ ++ +
Sbjct: 108 RVEDIKRHFERYGEVLHVRIRRN----FAFVQFETQEDATKALQRTHMTKILDRVVSVEY 163
Query: 181 RVREYDHRRDGSQSPSRGRSYSRGRSESRSR--SRSRGRSYSRSRSQSKSPKAKSSRRSP 238
+R+ R D SP RG Y R S + R + GR +S + P RRSP
Sbjct: 164 ALRDDSERGDRYDSPRRGSYYGRSPSPAHHRRPNPDYGRGHSPVYDKYNGP-VHDRRRSP 222
Query: 239 DRSRSRSASRSR 250
D R+RS R
Sbjct: 223 DYGRNRSPEYGR 234
>gi|396459915|ref|XP_003834570.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
gi|312211119|emb|CBX91205.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
Length = 493
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 91/192 (47%), Gaps = 29/192 (15%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDA 58
M+ +S LY+GNLP + +VE F +G I + L G+ F+E+++ DA
Sbjct: 131 MTEVSSTRLYLGNLPRSATKADVEAHFQTHGTGEITEVKLMN-----GFGFIEYKDPMDA 185
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
D + G DF G RL V+ A G R R+ + R R R +T LP
Sbjct: 186 RDVVPAFHGSDFMGERLIVQFARGSRARNENFTPHERVPPRPRRTPYRMR----ITSLPV 241
Query: 119 SASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGI-----------------VDYTNYDDMK 160
SWQDLKD R++G DV +S+V R+ GT + V+Y D+K
Sbjct: 242 ETSWQDLKDFARQSGLDVVYSEVGRERDGTGSVLYMSALARPRLTCACRFVEYETAADLK 301
Query: 161 HAIKKLDDSEFR 172
A++KLD EF+
Sbjct: 302 AAVEKLDRREFK 313
>gi|410904228|ref|XP_003965594.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Takifugu
rubripes]
Length = 227
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 29/159 (18%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLK-----IPPRPPGYAFVEFEEARDAEDAIR 63
+YVGNLP D++ER++EDLFYKYG I I+LK IP +AF+ FE+ RDA+DA+
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIP-----FAFIRFEDPRDADDAVY 60
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGV--------SRRSEYRVLVTG 115
GR+GY + +LRVE + G G G +RRS++RV+V+G
Sbjct: 61 GRNGYVYGDSKLRVEYPRSTGAKFGGMGGGGGGGGGGGGGPRGRFGPPTRRSDFRVIVSG 120
Query: 116 -----------LPSSASWQDLKDHMRRAGDVCFSQVFRD 143
+ +S + K+ + G+ F +VF +
Sbjct: 121 GLADKGTNTRHVYNSHGGLEYKEQVEDTGETAFIRVFEE 159
>gi|406862976|gb|EKD16025.1| pre-mRNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 326
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 89/174 (51%), Gaps = 24/174 (13%)
Query: 15 PGDIR---EREVEDLFYKYGP--IAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD--- 66
P D+R + +VE F +G I I L G+ F+E+++A DA D + G
Sbjct: 25 PADLRTATKADVEAHFNTHGTGEITEIKLMN-----GFGFIEYKDAMDARDVVPGMTAQQ 79
Query: 67 -----GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSAS 121
G DF G RL V+ A G R +R + +S R RR+ +R+ ++GLP S
Sbjct: 80 LQAFHGSDFMGERLTVQFARGTR-----NRDTFAASERTAPRPRRTPHRMQISGLPGETS 134
Query: 122 WQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
WQDLKD R++ DV +S+ RD G V++ D+K A++KLD EF+
Sbjct: 135 WQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETALDLKTAVEKLDGREFKGV 188
>gi|225712350|gb|ACO12021.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290463073|gb|ADD24584.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 195
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 19/173 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D + D+F KY D+K+ R +AF+EF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPTDTSRSGIRDIFSKYRD--RFDMKLKTR---FAFIEFDYHRDADHAVDNLDGL 73
Query: 69 DFDGHRLRVELAHGGRGRSSSDRH-----SSHSSGRGRGVSRR-----SEYRVLVTGLPS 118
F G R+ VE+A G R ++D++ +H + V R ++Y++LV L +
Sbjct: 74 TFRGRRISVEVARGPR---TADKYRFKGGLNHEPVQATWVKRYGTPEITKYKILVKNLST 130
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
WQDLKD M++AG V ++ ++ G+V ++N + M AI +D +
Sbjct: 131 RIEWQDLKDLMKKAGTVTYALAHKNNMH-EGMVCFSNEEGMLKAIDIFNDYDL 182
>gi|428186342|gb|EKX55192.1| hypothetical protein GUITHDRAFT_160399 [Guillardia theta CCMP2712]
Length = 321
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR 105
GY FV+FE++ DAEDAI DGY+ +G++LRV+ GR DR RG
Sbjct: 5 GYGFVKFEKSSDAEDAISQYDGYELEGNKLRVQHGRSQAGRRGDDRGGYDGGQGSRGPRP 64
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
+ RV V G+ SWQDLKD R+AG+ ++ D G G+++Y +D A +
Sbjct: 65 TGQNRVYVDGIDEKTSWQDLKDFARKAGNPAYTDTVMDSKGKYGVIEYRTAEDCYSACRM 124
Query: 166 LDDSEFRNAFSRAY 179
LD + + R Y
Sbjct: 125 LDGTMIGSCKVRVY 138
>gi|84997688|ref|XP_953565.1| hypothetical protein [Theileria annulata]
gi|65304562|emb|CAI72887.1| hypothetical protein, conserved [Theileria annulata]
Length = 732
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 18/158 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++GNL GD+ + E+ D F +GPI ID + +AF+++ ++DA+ AIR
Sbjct: 537 IFIGNLSGDVTQEELTDKFSSFGPINRIDFR-----RKFAFIDYVRSKDADAAIRDMHNK 591
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
G L+V+ H + + S R S +++ V+ L S SWQDLKD
Sbjct: 592 FIWGSYLKVQ-PHIDQNKRLSSRDPKPS------------FQITVSNLDQSVSWQDLKDF 638
Query: 129 MRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
R+AGDV ++ + G G+++YTN ++ A+ +L
Sbjct: 639 GRQAGDVHYTSIIIKGDKRFGLIEYTNEQSVQKAMNEL 676
>gi|392577928|gb|EIW71056.1| hypothetical protein TREMEDRAFT_56308 [Tremella mesenterica DSM
1558]
Length = 273
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
++R +Y+G+LP ++ + +VED+F GPI +D++I Y FVEFE +RDAEDA+R
Sbjct: 2 SNRRVYIGHLPPNVTKTDVEDVFKGLGPI--LDVRILGN---YGFVEFESSRDAEDALRD 56
Query: 65 RDGYDFDGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
+G G + VE R RG RR R+ V G+P S SW
Sbjct: 57 YNGVSLLGENIIVEAPRERRRDAYGPGVGGYRGGDAPPRGPPRRG-VRINVVGIPGSTSW 115
Query: 123 QDLKDHMRRAGD-VCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
QDLKD+ R + V ++ V R G G+++Y + + A+ +L
Sbjct: 116 QDLKDYGRLGSNMVTYADVDRYNPG-VGVIEYPTMGEAEEAMSRL 159
>gi|432852804|ref|XP_004067393.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oryzias
latipes]
Length = 146
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Query: 103 VSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHA 162
RR E V V GLP + SWQDLKDHMR AGDVCF+ V RDG G+V++ +DM++A
Sbjct: 4 APRRREEDVGVPGLPPTGSWQDLKDHMREAGDVCFADVQRDGE---GVVEFLRREDMEYA 60
Query: 163 IKKLDDSEFR-NAFSRAYVRVRE 184
+++LD +EFR + +Y+RV E
Sbjct: 61 LRRLDRTEFRSHQGETSYIRVFE 83
>gi|168038912|ref|XP_001771943.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676725|gb|EDQ63204.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878393|gb|AGE46159.1| arginine/serine-rich splicing factor RS27 transcript I
[Physcomitrella patens subsp. patens]
Length = 233
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 113/240 (47%), Gaps = 28/240 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R +Y GN D R+ E+E LF +YG + +D+K G++F+ E+ RDAEDAIR D
Sbjct: 6 RPVYCGNFEYDARQSEIERLFKEYGRVERVDMKT-----GFSFIYMEDERDAEDAIRHLD 60
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
+F R R+ + +G + R + R R S+ +V P + +DL+
Sbjct: 61 NMEFGRQRRRLSVEWAKQGDGAIRRR--EDARRNNTKLRPSKTLFVVNFDPINTRVRDLE 118
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREYD 186
H G + Q+ ++ G V Y D+ A K L+ + R V EY
Sbjct: 119 RHFEPYGKLVRVQIRKN----FGFVQYETQDE---ATKALESTNMSKVMDR--VITVEYA 169
Query: 187 HRRDGSQSPSRGRSYSRGRSESRSRSRSRGR-SYSRSRS------QSKSPKAKSSRRSPD 239
R DG + PS G RG S SR R SRG SY R RS +++SP A+ RSPD
Sbjct: 170 AREDG-EPPSSG----RGGSPSRYRGSSRGSPSYGRDRSPVRGSGRNRSPPARGRSRSPD 224
>gi|448111013|ref|XP_004201740.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359464729|emb|CCE88434.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 281
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 27/174 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++V L D+ ++E F GPI + L G+AFV FE DA+ A+ D
Sbjct: 7 IFVRPLGFDVEREKLEAHFQDIGPITDVQLM-----RGFAFVTFESEEDAKKAVETLDNS 61
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+FDG L++E A R + R ++RV VT LP +WQD KD
Sbjct: 62 EFDGQPLQIEFA------------------REKKEDTRGQFRVKVTNLPDGTAWQDFKDF 103
Query: 129 MRRAGDVC--FSQVFR--DGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
+R ++ F++VFR D G +++ + +++ A+ L++SEF+ A A
Sbjct: 104 VRDKTELAPTFAKVFRNYDTGEVIGALEFASAEELAQAVPLLNESEFQEAILTA 157
>gi|448096991|ref|XP_004198563.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359379985|emb|CCE82226.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 280
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 27/174 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++V L D+ ++E F GPI + L G+AFV FE DA+ A+ D
Sbjct: 7 IFVRPLGFDVEREKLEAHFQDIGPITDVQLM-----RGFAFVTFESEEDAKKAVETLDNS 61
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
+FDG L++E A R + R ++RV VT LP +WQD KD
Sbjct: 62 EFDGQPLQIEFA------------------REKKEDTRGQFRVKVTNLPDGTAWQDFKDF 103
Query: 129 MRRAGDVC--FSQVFR--DGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
+R ++ F++VFR D G +++ + +++ A+ L++SEF+ A A
Sbjct: 104 VRDKTELAPTFAKVFRNYDTGEVIGALEFASAEELAQAVPLLNESEFQEAILTA 157
>gi|149390935|gb|ABR25485.1| pre mRNA splicing factor sf2 [Oryza sativa Indica Group]
Length = 154
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 41/43 (95%)
Query: 144 GSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREYD 186
G GT GIVDYTNYDDMK+AI+KLDDSEF+NAFS+AY+RV+EYD
Sbjct: 1 GGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 43
>gi|300681335|emb|CAZ96065.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 324
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 124/265 (46%), Gaps = 23/265 (8%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYG + +DLK R G+AFV E+ RDAEDAI D
Sbjct: 26 RPIFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
G DF G R+RVE R GR S R S + +R ++ ++ P +
Sbjct: 86 GIDFGRKGRRIRVEWTKEDRTVGRRGSSRRSPTN-------ARPTKTLFVINFDPINTRI 138
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G V ++ ++ V + +D A++ + S F + +
Sbjct: 139 RDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNGSHFMDRVISVEYAL 194
Query: 183 REYDHR--RDGSQSPS-RGRSYSRGRSESRS---RSRSRGR-SYSRSRSQSKSPKAKSSR 235
R+ D + R SP RGR S GR S S R R RG Y RS+ + SP
Sbjct: 195 RDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERG-SPDYGRGG 253
Query: 236 RSPDRSRSRSASRSRSGSKPRSLSR 260
RSPD R + + G P + SR
Sbjct: 254 RSPDNGRGGRSPDNGRGVSPINGSR 278
>gi|300681351|emb|CAZ96098.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 315
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 117/247 (47%), Gaps = 23/247 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYG + +DLK R G+AFV E+ RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
G DF G R+RVE R GR S R S + +R ++ ++ P +
Sbjct: 86 GIDFGRKGRRIRVEWTKEDRTVGRRGSSRRSPTN-------ARPTKTLFVINFDPINTRI 138
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G V ++ ++ V + +D A++ + S F + +
Sbjct: 139 RDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNGSHFMDRVISVEYAL 194
Query: 183 REYDHR--RDGSQSPS-RGRSYSRGRSESRS---RSRSRGR-SYSRSRSQSKSPKAKSSR 235
R+ D + R SP RGR S GR S S R R RG Y RS+ + SP
Sbjct: 195 RDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERG-SPDYGRGG 253
Query: 236 RSPDRSR 242
RSPD R
Sbjct: 254 RSPDNGR 260
>gi|449273171|gb|EMC82779.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 417
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 18/134 (13%)
Query: 49 FVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGR--------G 100
FVEF++ RDA+DA+ +G D G R+ VE A G R R SS+ SGR G
Sbjct: 1 FVEFDDVRDADDAVYELNGKDLCGERVIVEHARGPR------RDSSYGSGRSGYGYRRSG 54
Query: 101 R---GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYD 157
R G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G++++ +Y
Sbjct: 55 RDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFKSYS 113
Query: 158 DMKHAIKKLDDSEF 171
DMK A++KLD +E
Sbjct: 114 DMKRALEKLDGTEV 127
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 70/129 (54%), Gaps = 22/129 (17%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L RER+VE F YG I +DLK GY FVEF++ RDA+DA+ +G
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKILEVDLK-----NGYGFVEFDDLRDADDAVYELNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGR-GRGVSR----------RSEYRVLVTGLP 117
D G R+ VE A G R R S+ SGR G G R R+EYR++V L
Sbjct: 59 DLCGERVIVEHARGPR------RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 112
Query: 118 SSASWQDLK 126
S SWQDLK
Sbjct: 113 SRCSWQDLK 121
>gi|224068024|ref|XP_002302651.1| predicted protein [Populus trichocarpa]
gi|222844377|gb|EEE81924.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 117/255 (45%), Gaps = 31/255 (12%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
+R ++VGN + R+ ++E LF KYG + +D+K G+AFV FE+ RDA DA+RG
Sbjct: 2 ARPVFVGNFEHETRQSDLERLFSKYGRVERVDMK-----SGFAFVYFEDDRDAADAVRGL 56
Query: 66 DGYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL-PSSASW 122
D F D RL VE A G RGR H G ++R + V P
Sbjct: 57 DNIPFGYDRRRLSVEWARGERGR--------HRDGPRSTANQRPTKTLFVINFDPIHTRV 108
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY--- 179
+D+K H R G+V ++ R+ + + ++ + A K L+ + R
Sbjct: 109 EDIKRHFERYGEVLHVRIRRNFA-------FVQFETQEDATKALECTHMTKILDRVVSVE 161
Query: 180 VRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRS---QSKSPKAKSSRR 236
+R+ R D SP RG SY+ GRS S R Y R+RS + R+
Sbjct: 162 YALRDDSERGDRYDSPRRG-SYN-GRSPSPVYRRRPSPDYVRARSPVYDKYNGPVYDRRQ 219
Query: 237 SPDRSRSRSASRSRS 251
SPD R+RS R+
Sbjct: 220 SPDYGRNRSPEYGRN 234
>gi|70943756|ref|XP_741887.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520548|emb|CAH80503.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 562
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 29/187 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGN+ D RE EV F KYG I +I K +AF+E+ + AE+AI +G
Sbjct: 143 IFVGNISPDAREEEVRRKFAKYGDIINIQWKRR-----FAFIEYSKPIYAENAIHEENGK 197
Query: 69 DFDGHRLRVELAH---------GGRGRSSSDRHS-----------SHSSGRGRGVSRRSE 108
+ G L V+ H G G S ++ S ++S + + +++
Sbjct: 198 HYMGEELSVQAHHLSPFKNSYSGNYGNSYNNYKSDPRNYENKYSRNYSDNKFESIEKKNS 257
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTT----GIVDYTNYDDMKHAIK 164
R++V + SWQDLKD R G V ++ V + +G GI++Y NY+ MK A++
Sbjct: 258 LRIVVKNIDEKVSWQDLKDFGREVGSVNYANVIYNNNGNNKEWYGIIEYYNYETMKRAVE 317
Query: 165 KLDDSEF 171
L+ +F
Sbjct: 318 VLNGKKF 324
>gi|156098601|ref|XP_001615316.1| alternative splicing factor ASF-1 [Plasmodium vivax Sal-1]
gi|148804190|gb|EDL45589.1| alternative splicing factor ASF-1, putative [Plasmodium vivax]
Length = 208
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 16/185 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPG--YAFVEFEEARDAEDAIRGRD 66
+YVGN+PG + ++E+ F ++G I ID+K G YAF+E+E + AE I ++
Sbjct: 10 IYVGNIPGSMSKQEIIKAFEEFGKITEIDIKYNRNTNGTNYAFIEYESYKSAEKTIENKN 69
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHS-----SHSSGRGRGV---SRRSEYRVLVTGLPS 118
G G+ L+VE + + + D + + S G V RS YRV+V P
Sbjct: 70 GQKLKGYMLKVEYSIDKKNKEGGDLIALGGREAVSKGLLTNVRLPKNRSHYRVVVKNFPR 129
Query: 119 SASWQD-LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSR 177
D +K + +AG V ++Q+ I +Y + M A+ LD + F N+ +
Sbjct: 130 KKIKLDGIKTFLMKAGKVIYTQL----EDEITIAEYDCREGMLRAVNTLDRTMF-NSTRK 184
Query: 178 AYVRV 182
YVRV
Sbjct: 185 VYVRV 189
>gi|300681317|emb|CAZ96031.1| arginine/serine-rich splicing factor [Sorghum bicolor]
Length = 324
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYG + +DLK R G+AFV E+ RDAEDAI D
Sbjct: 26 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKTVERSGGFAFVYMEDERDAEDAIHRLD 85
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
G DF G R+RVE R GR S R S +R ++ ++ P +
Sbjct: 86 GIDFGRKGRRIRVEWTKEDRTAGRRGSSRRSPTQ-------ARPTKTLFVINFDPINTRI 138
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G V ++ ++ V + +D A++ + S F + +
Sbjct: 139 RDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNGSHFMDRVISVEYAL 194
Query: 183 REYDHR--RDGSQSPS-RGRSYSRGRSESRS---RSRSRGRS-YSRSRSQSKSPKAKSSR 235
R+ D + R SP RGR S GR S S R R RG Y RS+ + SP
Sbjct: 195 RDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERG-SPDYGRGG 253
Query: 236 RSPDRSR 242
RSPD R
Sbjct: 254 RSPDNGR 260
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 24/179 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G LP +R+VE F YG + + +K G+ FV+F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 DFDGHRLRVEL------------AHGGRGRSSSDRHSSH---SSGRGRGVSRRSEYRVLV 113
D G R+ +E G RGR + R S+ R S R +R+++
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSGSGYRGREPTFRRGGERQFSNRYSRPCSTR--FRLVI 116
Query: 114 TGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L + SWQD+KDH+R+ G + +S+ + +V ++ +DD++ A+ KL E
Sbjct: 117 DNLSTRFSWQDIKDHIRKLGIEPTYSEAHKRNV-NQALVCFSTHDDLREAMNKLQGEEL 174
>gi|68058719|ref|XP_671328.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487404|emb|CAI03297.1| hypothetical protein PB301122.00.0 [Plasmodium berghei]
Length = 96
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNLP + R+VE+ F K+G I D+K +AF+EFE+ARDA DAI+ +DG
Sbjct: 10 IYVGNLPSHVTSRDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKDGC 69
Query: 69 DFDGHRLRVELAHGGRGRSS 88
DF G++LRVE+ R +
Sbjct: 70 DFGGNKLRVEVPFNARANGN 89
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 24/179 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G LP +R+VE F YG + + +K G+ FV+F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLVDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 DFDGHRLRVELAH------------GGRGRSSSDRHSSH---SSGRGRGVSRRSEYRVLV 113
D G R+ +E G RGR + R S+ R S R +R++V
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSGGGYRGREPTFRRGGERQFSNRYSRPCSTR--FRLVV 116
Query: 114 TGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L + SWQD+KDH+R+ G + +S+ + +V ++ +DD++ A+ KL E
Sbjct: 117 DNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNV-NQALVCFSTHDDLRDAMNKLQGEEL 174
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 24/174 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G LP +R+VE F YG ++ + +K G+ FV+F++ RDA+DA+ +G
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQDQRDADDAVHDLNGK 58
Query: 69 DFDGHRLRVEL------------AHGGRGRSSSDRHSSH---SSGRGRGVSRRSEYRVLV 113
+ G R+ +E G RGR + R S+ R S R +R+++
Sbjct: 59 ELCGERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTR--FRLVI 116
Query: 114 TGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
L + SWQD+KDH+R+ G + +S+ + IV +T++DD++ A+ KL
Sbjct: 117 DNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNV-NQAIVCFTSHDDLRDAMNKL 169
>gi|148687918|gb|EDL19865.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Mus
musculus]
Length = 184
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query: 107 SEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKL 166
+ + + GLP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KL
Sbjct: 72 AHFPFMTPGLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKL 128
Query: 167 DDSEFR-NAFSRAYVRV 182
DD++FR + +Y+RV
Sbjct: 129 DDTKFRSHEGETSYIRV 145
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 97/214 (45%), Gaps = 51/214 (23%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ Y
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAV-----Y 55
Query: 69 DFDGHRL---RVELAHGGRGRSS-------SDRHSSHS--SGRGRGVSRRSEYRVLVTGL 116
+ DG L RV + H SDR SS + R R+E R++V L
Sbjct: 56 ELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENL 115
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFS 176
S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+KL
Sbjct: 116 SSRVSWQDLKDFMRQAGEVTFADAHR-PKLNEGVVEFASYGDLKNAIEKLS--------- 165
Query: 177 RAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRS 210
G + R G S
Sbjct: 166 --------------GKEINGRKIKLIEG-----S 180
>gi|210075657|ref|XP_502448.2| YALI0D05547p [Yarrowia lipolytica]
gi|199425767|emb|CAG80636.2| YALI0D05547p [Yarrowia lipolytica CLIB122]
Length = 339
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L++ + D + ++EDLF +GPI + L Y F+EF+ DA A DG
Sbjct: 16 LFLRPIGPDTNKEQIEDLFSSHGPIKEVKLIK-----NYGFIEFDSLDDAIRAKDNVDGQ 70
Query: 69 DFDGHRLRVELAHGGR---GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
+G L A+ + R+ DR+ + G G + +RV ++GL SWQDL
Sbjct: 71 PLNGEPLFCTYANPIKVREPRTYRDRNDRNDRG---GDRKEDIFRVNISGLAPGVSWQDL 127
Query: 126 KDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
KD R A DV ++ V RD G G V++ + D M+ A+ KLD +EF+
Sbjct: 128 KDFGRTADVDVTYTNVSRDREG-EGTVEFRSADQMEQAVSKLDGTEFK 174
>gi|429859457|gb|ELA34237.1| pre-mRNA splicing factor [Colletotrichum gloeosporioides Nara gc5]
Length = 328
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR 105
G+ F+E+++A DA D + G DF G RL V+ A G R R + ++ R
Sbjct: 47 GFGFIEYKDAMDARDVVPAFHGSDFMGERLTVQFARGTRHREGGNGGGFNNERAPPR-PR 105
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
R+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RDG+G G V++ D++ A++
Sbjct: 106 RTPHRMQITGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNG-RGFVEFETAADLRTAVE 164
Query: 165 KLDDSEFR 172
KLD EF+
Sbjct: 165 KLDGREFK 172
>gi|18412169|ref|NP_567120.1| arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana]
gi|26454661|sp|P92964.2|RSP31_ARATH RecName: Full=Arginine/serine-rich-splicing factor RSP31
gi|16612268|gb|AAL27502.1|AF439831_1 AT3g61860/F21F14_30 [Arabidopsis thaliana]
gi|21928093|gb|AAM78075.1| AT3g61860/F21F14_30 [Arabidopsis thaliana]
gi|332646749|gb|AEE80270.1| arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana]
Length = 264
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VGN + R+ ++E LF KYG + +D+K GYAFV FE+ RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+ F + RL VE A G RGR D + + + + ++ P D
Sbjct: 57 NFPFGYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTL-------FVINFDPIRTKEHD 109
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
++ H G V ++ R+ S V + +D A++ S+ + +++
Sbjct: 110 IEKHFEPYGKVTNVRIRRNFS----FVQFETQEDATKALEATQRSKILDRVVSVEYALKD 165
Query: 185 YDHR--RDGSQSPSRGRS--YSR------GRSESRSRSRSRGRSYSRSRSQS----KSPK 230
D R R+G +SP R S Y R GR S + R Y R+RS K P
Sbjct: 166 DDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPA 225
Query: 231 AKSSRRSPDRSR 242
A RRSPD R
Sbjct: 226 AYERRRSPDYGR 237
>gi|449432024|ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
sativus]
gi|449477961|ref|XP_004155176.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
sativus]
Length = 253
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 116/258 (44%), Gaps = 43/258 (16%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VGN D R+ E+E LF KYG + ID+K G+AFV FE+ RDAEDAIRG D
Sbjct: 2 RPIFVGNFGYDTRQSELERLFSKYGRVERIDMK-----SGFAFVYFEDERDAEDAIRGLD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL-PSSASWQ 123
F D RL VE A G RGR H G ++R + V P +
Sbjct: 57 NLPFGYDRRRLSVEWARGERGR--------HRDGSKSMANQRPTKTLFVINFDPIRTRVR 108
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
D++ H G V ++ R+ + + ++ + A K L+ + R V
Sbjct: 109 DIERHFEPYGKVLNVRIRRNFA-------FVQFETQEDATKALECTHMSKILDR--VVSV 159
Query: 184 EYDHRRDGS------QSPSRGRSYSRG------RSES----RSRSRSRGRSYSRSRSQSK 227
EY R DG +SP R Y R RS S R S GR++S + +
Sbjct: 160 EYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPAYDRYN 219
Query: 228 SPKAKSSRRSPDRSRSRS 245
P + RRSPD R+RS
Sbjct: 220 GPYER--RRSPDYGRNRS 235
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
+YVG L RER++ED F KYG I +D+K GYAF+E+ ++RDA+DA+RG DG
Sbjct: 7 VVYVGRLSSRTRERDLEDAFSKYGRIIRLDMKA-----GYAFIEYNDSRDADDAVRGMDG 61
Query: 68 YDFDGHRLRVELAHGGRGRSSSDRHSSH 95
D DG R+ VE +H G GR S H
Sbjct: 62 NDLDGARISVEPSHRGEGRCFSCGKEGH 89
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +YVG+L + + E+ED F YGP+ ++ + PPG+AFVEFE+ RDAED
Sbjct: 1 MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAED 58
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSS 88
A+RG DG G R RVE+++GGRG S
Sbjct: 59 AVRGLDGRTICGRRARVEMSNGGRGYGS 86
>gi|6899884|emb|CAB71893.1| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana]
Length = 271
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VGN + R+ ++E LF KYG + +D+K GYAFV FE+ RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+ F + RL VE A G RGR D + + + + ++ P D
Sbjct: 57 NFPFGYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTL-------FVINFDPIRTKEHD 109
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
++ H G V ++ R+ S V + +D A++ S+ + +++
Sbjct: 110 IEKHFEPYGKVTNVRIRRNFS----FVQFETQEDATKALEATQRSKILDRVVSVEYALKD 165
Query: 185 YDHR--RDGSQSPSRGRS--YSR------GRSESRSRSRSRGRSYSRSRSQS----KSPK 230
D R R+G +SP R S Y R GR S + R Y R+RS K P
Sbjct: 166 DDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPA 225
Query: 231 AKSSRRSPDRSR 242
A RRSPD R
Sbjct: 226 AYERRRSPDYGR 237
>gi|395854494|ref|XP_003799724.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Otolemur
garnettii]
Length = 179
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 70 FDGHRLRVELAHGGRGRSSSDRHSSHSSGRG--RGVSRRSEYRVLVTGLPSSASWQDLKD 127
GH+ V G + RS S G G G S ++ + V LP SWQDLKD
Sbjct: 11 ITGHKSVVANQVGRKARSQVHLTLSAIWGGGVIHGPSWNNDCSIFVGNLPPGGSWQDLKD 70
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYVRVREYD 186
H R AGDVC++ +++D TT +V++ +D+ +AI++LD+++FR + AY++V
Sbjct: 71 HPREAGDVCYADIYQD---TTSVVEFVQKEDITYAIEELDNTKFRSHEGETAYIQV---- 123
Query: 187 HRRDGSQSPSRG 198
DG +SPS G
Sbjct: 124 -NVDGPRSPSYG 134
>gi|226494041|ref|NP_001147698.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195613160|gb|ACG28410.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195655913|gb|ACG47424.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 28/252 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYG + +DLK G+AFV E+ RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAISRLD 56
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
G DF G R+RVE R GR SS R S + ++ ++ ++ P +
Sbjct: 57 GIDFGRKGRRIRVEWTKEDRTVGRKSSSRRSPTN-------TKPTKTLFVINFDPINTRI 109
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G V ++ ++ + + +D A++ + S F + +
Sbjct: 110 RDLERHFDKYGRVANVRIKKN----FAFIQFEVQEDATRALEGTNGSHFMDRVISVEYAL 165
Query: 183 REYDHR--RDGSQSPS-RGRSYSRGRSESRS---RSRSRGR-SYSRSRSQSKSPKAKSSR 235
R+ D + R SP RGR S GR S S R R RG Y RS+ + SP
Sbjct: 166 RDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERG-SPDYGRGG 224
Query: 236 RSPDRSRSRSAS 247
RSPD R S +
Sbjct: 225 RSPDNGRGVSPA 236
>gi|194696906|gb|ACF82537.1| unknown [Zea mays]
gi|413935351|gb|AFW69902.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 119/252 (47%), Gaps = 28/252 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYG + +DLK G+AFV E+ RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAISRLD 56
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
G DF G R+RVE R GR SS R S + ++ ++ ++ P +
Sbjct: 57 GIDFGRKGRRIRVEWTKEDRTVGRKSSSRRSPTN-------TKPTKTLFVINFDPINTRI 109
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G V ++ ++ + + +D A++ + S F + +
Sbjct: 110 RDLERHFDKYGRVANVRIKKN----FAFIQFEIQEDATRALEGTNGSHFMDRVISVEYAL 165
Query: 183 REYDHR--RDGSQSPS-RGRSYSRGRSESRS---RSRSRGR-SYSRSRSQSKSPKAKSSR 235
R+ D + R SP RGR S GR S S R R RG Y RS+ + SP
Sbjct: 166 RDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERG-SPDYGRGG 224
Query: 236 RSPDRSRSRSAS 247
RSPD R S +
Sbjct: 225 RSPDNGRGVSPA 236
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 15/107 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +E+ED F+++G I + + RPPG+AF+EFE++RDAEDA+R DG
Sbjct: 12 VYVGGLPNDATSQELEDAFHRFGRIRKV--WVARRPPGFAFIEFEDSRDAEDAVRALDGT 69
Query: 69 DFDGHRLRVELAHGGR------------GRSSSDR-HSSHSSGRGRG 102
G R RVEL+HG R GR SSDR H + G RG
Sbjct: 70 RICGVRARVELSHGRRRNGAPDYGGSRGGRFSSDRPHGAPDYGGSRG 116
>gi|50420251|ref|XP_458658.1| DEHA2D04400p [Debaryomyces hansenii CBS767]
gi|49654325|emb|CAG86797.1| DEHA2D04400p [Debaryomyces hansenii CBS767]
Length = 282
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++V L ++ +VE F GP+ + L G+AFV FE DA+ A+ D
Sbjct: 7 IFVRPLAFEVEREQVEAHFSDVGPLTDVQLMR-----GFAFVTFENEEDAKRAVETLDNT 61
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
DF+G L++E A R + R ++RV VT LP +WQD KD
Sbjct: 62 DFEGQPLQIEFA------------------REKKEDTRGQFRVKVTNLPDGTAWQDFKDF 103
Query: 129 MRRAGDVC--FSQVFR--DGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
+R ++ F++VFR D G +++ + D++ I L++SEF+ A
Sbjct: 104 VRDRTELAPTFAKVFRNYDTDEVIGALEFGSADELATVIPLLNESEFQGA 153
>gi|448878364|gb|AGE46145.1| arginine/serine-rich splicing factor SR30 transcript IV [Sorghum
bicolor]
Length = 97
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 44/71 (61%), Gaps = 19/71 (26%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYK-------------------YGPIAHIDLKIP 41
M+ R T+YVGNLPGDIREREV+DLFYK YG I IDLKIP
Sbjct: 1 MTRRNGCTIYVGNLPGDIREREVDDLFYKSNGWSSGREGNVDCEWSIFYGRIVEIDLKIP 60
Query: 42 PRPPGYAFVEF 52
PRPPG+AFVE
Sbjct: 61 PRPPGFAFVEL 71
>gi|296824244|ref|XP_002850623.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
gi|238838177|gb|EEQ27839.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
Length = 363
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 73/236 (30%)
Query: 1 MSSRASRTLYVGNLPGD-------------------IREREVEDLF--YKYGPIAHIDLK 39
MS +S LY+GNLP + ++++E+ F + G I I L
Sbjct: 1 MSEVSSTRLYLGNLPRNGMLLVLLHPISVTVIVSLSFNKQDIEEHFGSHGTGKITEIKLM 60
Query: 40 IPPRPPGYAFVEFEEARDAEDAIRGRD--------------------------------- 66
G+ F+E+E+A DA+D + G D
Sbjct: 61 Q-----GFGFIEYEDAMDAKDVVPGEDTSVVAFTFLDFFFLCFSLFSVYSMDDALLIMGP 115
Query: 67 -------GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSS 119
G DF G RL V+ A G R R S+ RR+ YR+ +TGLP +
Sbjct: 116 VLILPSNGTDFKGERLTVQFARGPRRREPFPGPPERSTAP---RPRRTIYRMQITGLPET 172
Query: 120 ASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
SWQDLKD R++G DV +S+ RD G G V++ N +D++ A++KLD ++F+ +
Sbjct: 173 -SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAVEKLDGTDFKGS 225
>gi|1707366|emb|CAA67798.1| splicing factor [Arabidopsis thaliana]
Length = 264
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VGN + R+ ++E LF KYG + +D+K GYAFV FE+ RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+ F + +L VE A G RGR D + + + + ++ P D
Sbjct: 57 NFPFGYEKRKLSVEWAKGERGRPRGDAKAPSNLKPTKTL-------FVINFDPIRTKEHD 109
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
++ H G V ++ R+ S V + +D A++ S+ + +++
Sbjct: 110 IEKHFEPYGKVTNVRIRRNFS----FVQFETQEDATKALEATQRSKILDRVVSVEYALKD 165
Query: 185 YDHR--RDGSQSPSRGRS--YSR------GRSESRSRSRSRGRSYSRSRSQS----KSPK 230
D R R+G +SP R S Y R GR S + R Y R+RS K P
Sbjct: 166 DDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPA 225
Query: 231 AKSSRRSPDRSR 242
A RRSPD R
Sbjct: 226 AYERRRSPDYGR 237
>gi|238878201|gb|EEQ41839.1| predicted protein [Candida albicans WO-1]
Length = 331
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 27/173 (15%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
++ L+V L D+ EV+D F + P+ + L GYAFV FE DA+ A+
Sbjct: 52 VTKQLFVRPLRNDVTREEVQDHFSRAAPVVEVRLM-----EGYAFVTFENEDDAKQALEL 106
Query: 65 RDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+ +F+G +L++E A R + R +YR+L+T L +WQD
Sbjct: 107 LNDAEFNGEKLQIEFAKERREDT------------------RGKYRLLITNLAEGTAWQD 148
Query: 125 LKDHMRRAGD--VCFSQVFR--DGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
+KD +R D + +VF D TT + + + +D+ AI LD + FR+
Sbjct: 149 IKDFVREKTDSQPSYVKVFTNFDNGETTCSMQFQSREDLDRAIPLLDKAVFRD 201
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 13/123 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LY+GN+ D RER+VE F YG + + LK GY FVEFE+ RDA+DA++ DG
Sbjct: 8 LYLGNISDDTRERDVEKFFKGYGKLREVALK-----NGYGFVEFEDHRDADDAVQDLDGK 62
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVS--------RRSEYRVLVTGLPSSA 120
D +G R+RVE A R + +S S S RGR RR++YR+ V L +
Sbjct: 63 DMNGSRVRVEFARSPREKRNSRYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLSTRT 122
Query: 121 SWQ 123
SWQ
Sbjct: 123 SWQ 125
>gi|325179817|emb|CCA14220.1| RNA binding protein putative [Albugo laibachii Nc14]
Length = 360
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAH-IDLKIPPRPPGYAFVEFEEARDAE 59
M R +YVGNL ++ ++++D G + H + +++ R G V + +A+
Sbjct: 64 MEVVTGRRVYVGNLSWKVKWQDLKDHMRSAGDVEHAVIMEVGGRSKGCGIVTYATESEAQ 123
Query: 60 DAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG-RGRGVSRRSEYRVLVTGLPS 118
+AI + + DG ++ V DR + S+ R +G RV V LP
Sbjct: 124 NAIETLNDTELDGRKIFVR----------EDREENASAQPRAKGC------RVYVGNLPW 167
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTT---GIVDYTNYDDMKHAIKKLDDSEF--RN 173
+ WQ LKDHM++AG V + V + G + G+V+++ D+ ++AI L+D+E RN
Sbjct: 168 TVKWQALKDHMKQAGTVIHADVLEEAGGWSKGCGLVEFSTPDEAQNAIDMLNDTELEGRN 227
Query: 174 AFSR 177
F R
Sbjct: 228 IFVR 231
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPP--RPPGYAFVEFEEARDAEDAIRG 64
+ +YVGNLP D R +E+LF G + ++ P R G+ V+F+ + +A+ AI
Sbjct: 282 KQVYVGNLPWDTTSRNLENLFQSAGDVERAEVVEFPDGRSRGFGIVKFKSSSEAQCAIDE 341
Query: 65 RDGYDFDGHRLRVEL 79
+G + +G RL V L
Sbjct: 342 LNGTEHNGRRLEVRL 356
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 43/196 (21%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDL--KIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+YVGNLP ++ + ++D + G + H D+ + G VEF +A++AI +
Sbjct: 160 VYVGNLPWTVKWQALKDHMKQAGTVIHADVLEEAGGWSKGCGLVEFSTPDEAQNAIDMLN 219
Query: 67 GYDFDGHRLRV-----------------------------ELAHGGRGRSSSDRHSSHSS 97
+ +G + V GRG + SHSS
Sbjct: 220 DTELEGRNIFVREDREPDGGSITSIARRGGRGGRSSGGRGNSRFAGRGPREGNSGHSHSS 279
Query: 98 GRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV--FRDG-SGTTGIVDYT 154
+V V LP + ++L++ + AGDV ++V F DG S GIV +
Sbjct: 280 ---------DVKQVYVGNLPWDTTSRNLENLFQSAGDVERAEVVEFPDGRSRGFGIVKFK 330
Query: 155 NYDDMKHAIKKLDDSE 170
+ + + AI +L+ +E
Sbjct: 331 SSSEAQCAIDELNGTE 346
>gi|145346370|ref|XP_001417662.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577890|gb|ABO95955.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 129
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 6/135 (4%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R +YVGNLP D R+V+ F +G +A +++K P PP +AFV F++ARDAE A R D
Sbjct: 1 RAVYVGNLPLDASSRDVDRRFAAHGVVARVEVKRPRHPPAFAFVTFDDARDAERAARAED 60
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
G FDG R + R R +D + S R R +R++E+ V V LP A W+D+K
Sbjct: 61 GTTFDGRRGPYDRP---RWRDGAD---ARSMVRERAATRKTEHSVKVEDLPRGADWRDVK 114
Query: 127 DHMRRAGDVCFSQVF 141
D RRAG V ++ F
Sbjct: 115 DAFRRAGRVTYASTF 129
>gi|390457607|ref|XP_003731973.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Callithrix jacchus]
Length = 373
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 13 NLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDG 72
+LP + ++ ED+ YKY I +DLK P PPG + +DA+ G D+D
Sbjct: 32 HLPSESPTKDTEDMIYKYCTIRDMDLKNPRDPPGPLL-----SSVTQDAVYGLHSCDYD- 85
Query: 73 HRLRVELAHGGRGRSSSDRHSSHSSG-RGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRR 131
R ++ G + S G G ++R S RV+V+ LP S Q+LK HM
Sbjct: 86 -RCLTQVGSPPNGLGTGQGGSESPQGFHGSPLTRWSXNRVVVSWLPPDGSXQELKXHMHE 144
Query: 132 AGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
G V +++V+++GS G+++ +DM +KLD+++FR+
Sbjct: 145 TGGVYYAEVYQNGS---GVMEDVKKEDMNFLARKLDNTKFRS 183
>gi|349604033|gb|AEP99695.1| Splicing factor, arginine/serine-rich 9-like protein, partial
[Equus caballus]
Length = 105
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-N 173
GLP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR +
Sbjct: 1 GLPPSGSWQDLKDHMREAGDVCYADVQKDG---MGMVEYLRKEDMEYALRKLDDTKFRSH 57
Query: 174 AFSRAYVRV 182
+Y+RV
Sbjct: 58 EGETSYIRV 66
>gi|426374380|ref|XP_004054052.1| PREDICTED: serine/arginine-rich splicing factor 9 [Gorilla gorilla
gorilla]
Length = 115
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 113 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
GLP S SWQDLKDHMR AGDVC++ V +DG G+V+Y +DM++A++KLDD++FR
Sbjct: 9 CLGLPPSGSWQDLKDHMREAGDVCYADVQKDG---VGMVEYLRKEDMEYALRKLDDTKFR 65
Query: 173 -NAFSRAYVRV 182
+ +Y+RV
Sbjct: 66 SHEGETSYIRV 76
>gi|242063870|ref|XP_002453224.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|241933055|gb|EES06200.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|448878270|gb|AGE46098.1| arginine/serine-rich splicing factor RS34 [Sorghum bicolor]
Length = 295
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D+R EVE LF KYG + +DLK G+AFV E+ RDAEDAI D
Sbjct: 2 RPVFCGNLDYDVRISEVERLFGKYGRVERVDLKT-----GFAFVYMEDERDAEDAIHRLD 56
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
G DF G R+RVE R GR S R S +R ++ ++ P +
Sbjct: 57 GIDFGRKGRRIRVEWTKEDRTAGRRGSSRRSPTQ-------ARPTKTLFVINFDPINTRI 109
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G V ++ ++ V + +D A++ + S F + +
Sbjct: 110 RDLERHFDKYGRVANVRIKKN----FAFVQFEVQEDATRALEGTNGSHFMDRVISVEYAL 165
Query: 183 REYDHR--RDGSQSPS-RGRSYSRGRSESRS---RSRSRGR-SYSRSRSQSKSPKAKSSR 235
R+ D + R SP RGR S GR S S R R RG Y RS+ + SP
Sbjct: 166 RDDDEKGERGNGYSPDRRGRERSPGRRRSPSPYGRGRERGSPDYGRSKERG-SPDYGRGG 224
Query: 236 RSPDRSRSRSASRSRSGSKP 255
RSPD R + + G P
Sbjct: 225 RSPDNGRGGHSPENGRGVSP 244
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKK 165
R++YRV+V L S SWQDLKD++R+AGDV F++ + GIVD+ YDDMK AI+K
Sbjct: 151 RTKYRVIVENLSSRVSWQDLKDYLRQAGDVSFAEAHQ-SVQNEGIVDFATYDDMKAAIEK 209
Query: 166 LDDSEF 171
LDD+E
Sbjct: 210 LDDTEL 215
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
S A +++G L E +VE F +G I + LK GY FVEFEE RDAEDA+
Sbjct: 15 SMAGSRVFIGRLSNRATESDVERFFKGFGRIREVKLK-----TGYGFVEFEENRDAEDAV 69
Query: 63 RGRDGYDFDGHRLRVELAHG 82
+ G R+ VE A G
Sbjct: 70 YEMNNQSLCGERVTVEHAKG 89
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +YVG+L + + E+ED F YGP+ ++ + PPG+AFVEFE+ RDAED
Sbjct: 1 MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAED 58
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRG 85
AIRG DG G R RVE+++G RG
Sbjct: 59 AIRGLDGRTICGRRARVEMSNGSRG 83
>gi|313232321|emb|CBY09430.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 14/170 (8%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
T+++G+LP I+ V+D F +YGP+ I L + F++F + +DA++A++ DG
Sbjct: 8 TVWMGDLPPGIKRGHVKDFFEEYGPLGGIRLM-----NNFGFIDFRKKKDAKEAVKELDG 62
Query: 68 YDFDGHRLRVELAH--GGRGRSSSDRHSSHSSGRGRGVSR-----RSEYRVLVTGLPSSA 120
G R+R+E + GG + D + + G S R++Y + V+ L +
Sbjct: 63 KKLKGARIRLEHSDGPGGSKKKGEDYDAVNFPPIGGQSSMYERPYRTKYTISVSNLSTRF 122
Query: 121 SWQDLKDHMRRAGDVCFSQV-FRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
SW DLK+ MRRAG+V ++ R G G G V + + + A++KL+ +
Sbjct: 123 SWADLKNFMRRAGEVTYTDAHVRSGEG-NGEVCFKDRKGLYRAMQKLNST 171
>gi|126274640|ref|XP_001388006.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213876|gb|EAZ63983.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 271
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 27/176 (15%)
Query: 3 SRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAI 62
S A ++V L ++ ++E F GPIA + + G+A++ FE + DA AI
Sbjct: 2 SEAGVKVFVRPLSFEVEREQLESHFGTAGPIADVLIL-----RGFAYITFENSEDATRAI 56
Query: 63 RGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
+ +FDG +L+VE A R R R +YRV +T LP +A+W
Sbjct: 57 ETFNATEFDGQQLQVETA------------------RERPEDTRGKYRVKITNLPDNAAW 98
Query: 123 QDLKDHMRRAGDV--CFSQVFRD-GSG-TTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
QDLKD +R F+++ RD SG +G +++ + ++++ AI LD +EF++A
Sbjct: 99 QDLKDFVREKTGYQGLFAKINRDYESGEVSGSLEFASAEELERAIPLLDKAEFQDA 154
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS+R ++VG+LP + R++ED F + G I + K YAFVEF + RDA D
Sbjct: 1 MSAR----VFVGHLPRKVDRRDIEDYFDRIGRIRDVVHK-----GNYAFVEFADERDARD 51
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSD-----RHSSHSSGR-GRGVSRRSEYRVLVT 114
AI +G + G R+ VELA+ R S R+ GR RG RR++Y++ +
Sbjct: 52 AISELNGTSWKGERIIVELANRRRRSRSQSGDRRGRNPRRKPGRITRGPPRRTDYQISIK 111
Query: 115 GLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L + SWQDLKD V ++ + GIV++ ++M +K + F
Sbjct: 112 NLSTRVSWQDLKDIFGEVAKVVYADAH-NKRRNYGIVEFDTKEEMNRCYEKFNGKSF 167
>gi|226472962|emb|CAX71167.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 161
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFSRAYV 180
WQDLKDHMR AGDV ++ VFRDG TG+V++ Y+DMK+AI++LDDS+FR + +Y+
Sbjct: 68 WQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYI 124
Query: 181 RVRE 184
RVRE
Sbjct: 125 RVRE 128
>gi|241950483|ref|XP_002417964.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641302|emb|CAX45682.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 291
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 27/173 (15%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
A++ L+V L D+ EV+D F + P+ + L GYAFV FE D++ A+
Sbjct: 7 ATKQLFVRPLRNDVTREEVQDHFSRAAPVVEVRLM-----EGYAFVTFENEDDSKQALEL 61
Query: 65 RDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+ +F+G +L++E A R + R +YR+L+T L +WQD
Sbjct: 62 LNDAEFNGEKLQIEFAKEKREDT------------------RGKYRLLITNLAEGTAWQD 103
Query: 125 LKDHMRRAGD--VCFSQVFR--DGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
+KD +R D + +VF D TT + + + +D+ AI LD + FR+
Sbjct: 104 IKDFVREKTDSQPSYVKVFTNYDNGETTCSMQFQSREDLDRAIPLLDKAVFRD 156
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L + ++E+ED F YGP+ + + PPG+AFVEFE+ARDAEDA+RG DG
Sbjct: 16 VYVGDLGSNADKQEIEDAFSYYGPLRSV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 73
Query: 69 DFDGHRLRVELAHG 82
G R RVEL+ G
Sbjct: 74 TICGRRARVELSTG 87
>gi|326428383|gb|EGD73953.1| hypothetical protein PTSG_05647 [Salpingoeca sp. ATCC 50818]
Length = 372
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPR--PPGYAFVEFEEARDA 58
S T+YVG LP + + ++DL K GP+ H+++ G V F A DA
Sbjct: 161 FSGEMGSTVYVGGLPYSMTWQHLKDLMRKAGPVEHVEVMYDGNGMSKGCGLVRFATAEDA 220
Query: 59 EDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPS 118
++AIR + DG L V R + +D++ RGVS V V LP
Sbjct: 221 QNAIRMFNEQPLDGRNLLV------RVDAEADKYR-------RGVS------VHVGNLPW 261
Query: 119 SASWQDLKDHMRRAGDVCFSQVFRDGSGTT---GIVDYTNYDDMKHAIKKLDDSEF 171
+W++LKD MR AG+V ++V D +G + GIV + + D AI++ ++ E+
Sbjct: 262 EVTWRELKDLMRPAGEVIHAEVMHDNNGLSRGWGIVRFVSADGANAAIEQFNEFEW 317
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDL--KIPPRPPGYAFVEFEEARDAEDAIRGR 65
++YVGNL +++ + G +A D+ + R G V F + A AI
Sbjct: 59 SVYVGNLSWSTTWPRLKEFMSEIGHVAFADVLRDMNGRSKGCGIVVFGDVETANRAIAEM 118
Query: 66 DGYDFDGHRLRVEL---AHGGRGRSSSDRHSSHSSGRGRGVSRRSEY--RVLVTGLPSSA 120
G + DG ++ V AH RS+ H + E V V GLP S
Sbjct: 119 SGRELDGRQIMVREDREAHRFPRRSARPPAPMHRPSTNYTATFSGEMGSTVYVGGLPYSM 178
Query: 121 SWQDLKDHMRRAGDVCFSQVFRDGSGTT---GIVDYTNYDDMKHAIKKLDDSEF--RNAF 175
+WQ LKD MR+AG V +V DG+G + G+V + +D ++AI+ ++ RN
Sbjct: 179 TWQHLKDLMRKAGPVEHVEVMYDGNGMSKGCGLVRFATAEDAQNAIRMFNEQPLDGRNLL 238
Query: 176 SRAYVRVREY 185
R +Y
Sbjct: 239 VRVDAEADKY 248
>gi|354548311|emb|CCE45047.1| hypothetical protein CPAR2_700510 [Candida parapsilosis]
Length = 272
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 29/173 (16%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M ++ L+V + D+RE ++ + F P+ + L GYAFV F+ +A+
Sbjct: 1 MEQVPTKQLFVRPIRDDVREDDLIEFFSTAAPVVEVRLM-----QGYAFVSFQTEDEADA 55
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
A++ DG + +G +L+VE A ++ +RV +TGL
Sbjct: 56 ALKKMDGQELNGEQLQVEFAK----------------------PKKEVHRVKLTGLIDGT 93
Query: 121 SWQDLKDHMR--RAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+WQD+KD +R + F +VF + SGT + + + DD++ AI LD S F
Sbjct: 94 AWQDIKDFVRDKTGTEPSFVRVFTNESGTVCDLQFESRDDLEKAIPLLDKSTF 146
>gi|222137596|gb|ACM45325.1| rbp1-like RNA-binding protein PB [Bombyx mori]
Length = 159
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + + E+E +F KYG I ++ + PPG+AFVEFE+ RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSG 98
G R+RVE+++ GR+ DR S S+
Sbjct: 71 RCCGTRIRVEMSN---GRTRRDRRSIFSTN 97
>gi|225712010|gb|ACO11851.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +Y+GNL + E+ED F KYGP+ ++ + PPG+AFVEFE+ RDAED++RG
Sbjct: 10 SCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYDFDGHRLRVELAHG 82
DG G R+RVE++ G
Sbjct: 68 DGTRVCGQRVRVEMSSG 84
>gi|297821068|ref|XP_002878417.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata subsp.
lyrata]
gi|297324255|gb|EFH54676.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VGN + R+ ++E LF KYG + +D+K GYAFV FE+ RDAEDAIR D
Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVERVDMKS-----GYAFVYFEDERDAEDAIRKLD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+ F + RL VE A G RGR D ++ + + + ++ P D
Sbjct: 57 NFPFGYEKRRLSVEWAKGERGRPRGDAKATSNLKPTKTL-------FVINFDPIRTKEHD 109
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
++ H G V ++ R+ S V + +D A++ S+ + +++
Sbjct: 110 IEKHFEPYGKVINVRIRRNFS----FVQFETQEDATKALEATQRSKILDRVVSVEYALKD 165
Query: 185 YDHRRD--GSQSPSRGRS--YSR------GRSES----RSRSRSRGRSYSRSRSQSKSPK 230
D R D G +SP R S Y R GR S R S GR+ S + K P
Sbjct: 166 DDERDDRYGGRSPRRSLSPVYRRRPSPDYGRRPSPDYGRRPSPDNGRARSPEYDRYKGPA 225
Query: 231 AKSSRRSPDRSR 242
A RRSPD R
Sbjct: 226 AYERRRSPDYGR 237
>gi|254582016|ref|XP_002496993.1| ZYRO0D12892p [Zygosaccharomyces rouxii]
gi|238939885|emb|CAR28060.1| ZYRO0D12892p [Zygosaccharomyces rouxii]
Length = 411
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 30/166 (18%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L+V P D++E E+ ++F +GP+ + + G+AFVEFEEA A AI +G
Sbjct: 130 LFVRPFPFDVQEAELNEIFTPFGPMKEVKILN-----GFAFVEFEEAESAARAIEEVNGK 184
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
F L V +S R YR+++ LP SWQ+LKD
Sbjct: 185 TFANQPLEV-------------MYSKLPPKR---------YRIVLRNLPEGCSWQELKDL 222
Query: 129 MRRAG-DVCFSQV-FRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
R + FS V RD G TG +++ N + ++ A+++L++ EFR
Sbjct: 223 ARENSLETTFSSVNTRDFDG-TGALEFPNEEILQDALERLNNIEFR 267
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+LP D +E+E+E F YGP+ + + PPG+AFVEFE+ RDA+D++RG DG
Sbjct: 32 VYVGDLPRDAQEKELERAFSYYGPLKSV--WVARNPPGFAFVEFEDPRDADDSVRGLDGS 89
Query: 69 DFDGHRLRVELAHG 82
G R+RVEL+ G
Sbjct: 90 SLCGTRVRVELSTG 103
>gi|68482041|ref|XP_715038.1| hypothetical protein CaO19.7238 [Candida albicans SC5314]
gi|46436641|gb|EAK96000.1| hypothetical protein CaO19.7238 [Candida albicans SC5314]
Length = 286
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 27/173 (15%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
++ L+V L D+ EV+D F + P+ + L GYAFV FE DA+ A+
Sbjct: 7 VTKQLFVRPLRNDVTREEVQDHFSRAAPVVEVRLM-----EGYAFVTFENEDDAKQALEL 61
Query: 65 RDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+ +F+G +L++E A R + R +YR+L+T L +WQD
Sbjct: 62 LNDAEFNGEKLQIEFAKERREDT------------------RGKYRLLITNLAEGTAWQD 103
Query: 125 LKDHMRRAGD--VCFSQVFR--DGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
+KD +R D + +VF D TT + + + +D+ AI LD + FR+
Sbjct: 104 IKDFVREKTDSQPSYVKVFTNFDNGETTCSMQFQSREDLDRAIPLLDKAVFRD 156
>gi|389615269|dbj|BAM20617.1| RNA-binding protein [Papilio polytes]
Length = 159
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + + E+E +F KYG I ++ + PPG+AFVEFE+ RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGLDGT 70
Query: 69 DFDGHRLRVELAHG 82
G R+RVE+++G
Sbjct: 71 RCCGTRIRVEMSNG 84
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +Y+GNL + E+ED F KYGP+ ++ + PPG+AFVEFE+ RDAED++RG
Sbjct: 10 SCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYDFDGHRLRVELAHG 82
DG G R+RVE++ G
Sbjct: 68 DGTRVCGQRVRVEMSSG 84
>gi|221122641|ref|XP_002154006.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 259
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 19/176 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LYVG L + ER+++ F YG I I +K GYAFV+F++ RDA+DA+ +G
Sbjct: 4 LYVGRLNNRVIERDLKKFFDNYGKIRDIMMK-----NGYAFVDFDDYRDADDAVYDLNGK 58
Query: 69 DFDGHRLRVELAHG----------GRGRSSSDRHSSHSSGRGR---GVSRRSEYRVLVTG 115
+ G R+ +E A G GR R DR R R G R+++ + V
Sbjct: 59 ELMGDRVIIEHAKGIERGSGGAPYGRERFKDDRSGFGRKQRARDKYGPPVRTKWMLRVEN 118
Query: 116 LPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
L S SWQDLKD+ R +V ++ R G I T Y+DMK+ I+K+D++E
Sbjct: 119 LSSRVSWQDLKDYCRPHAEVTYADAHRKERGVACICTST-YEDMKNLIRKIDNTEL 173
>gi|225710746|gb|ACO11219.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 152
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +Y+GNL + E+ED F KYGP+ ++ + PPG+AFVEFE+ RDAED++RG
Sbjct: 10 SCKVYIGNLGNSASKYELEDAFSKYGPLKNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYDFDGHRLRVELAHG 82
DG G R+RVE++ G
Sbjct: 68 DGTRVCGQRVRVEMSSG 84
>gi|342326382|gb|AEL23106.1| hnRNP protein [Cherax quadricarinatus]
Length = 284
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 17/168 (10%)
Query: 10 YVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYD 69
YVG L + ER+++ F YG + I +K G+ FVEF++ RDA+DA+ +G +
Sbjct: 1 YVGGLSYRVGERDLDRFFRSYGRLRDIVIK-----NGFGFVEFDDDRDADDAVYEMNGKE 55
Query: 70 FDGHRLRVELAHGG------RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
G R+ VE A R HSS G++ R++YR+ V L S SWQ
Sbjct: 56 LLGGRVTVEKARAAPRMRWPRAPPPRGFHSSRF-----GMAARTDYRLTVEDLSSRVSWQ 110
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
DLKD MR+AG+V ++ + G+V++ Y DMK+A+ +LD E
Sbjct: 111 DLKDFMRQAGEVTYADAHKY-RRNEGVVEFATYADMKNAMHRLDGKEL 157
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 40 VYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGT 97
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 98 RCCGTRVRVEM 108
>gi|440471047|gb|ELQ40084.1| hypothetical protein OOU_Y34scaffold00462g38 [Magnaporthe oryzae
Y34]
Length = 905
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 27/209 (12%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M+ +S LY+GNLP + +V F +G ++K+ G+ F+E+++ DA D
Sbjct: 584 MTEVSSTRLYLGNLPRSATKEDVSTHFSSHGTGKITEIKLMN---GFGFIEYDDPLDARD 640
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG---------RGRGVSRRSEYRV 111
+ G F G RL V+ A G R R G R RR+ +R+
Sbjct: 641 VVPAFHGSTFMGERLTVQFARGTRNREGGSGGGGGGGGGGGGGYGGERSGPRPRRTAFRM 700
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
++GLP SWQ DV +S+ R+ +G G V++ D+ A++ LD EF
Sbjct: 701 QISGLPVDTSWQ---------LDVVYSETGRNNNG-EGFVEFETAADLASAVEALDGKEF 750
Query: 172 RNAFSRAYVRVREYDHRRDGSQSPSRGRS 200
++ R + RDG RGRS
Sbjct: 751 KDKIVRCVANTQPDPPPRDG-----RGRS 774
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AFVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|356520256|ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
max]
Length = 259
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 114/261 (43%), Gaps = 32/261 (12%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG I +D+K G+AFV +E+ RDAE+AIR D
Sbjct: 2 RPIFAGNLEYDTRQSELERLFAKYGRIDRVDMKS-----GFAFVYYEDERDAEEAIRALD 56
Query: 67 GYDFDGH---RLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
F GH RL VE A G RGR H G + + ++ ++ P +
Sbjct: 57 NVPF-GHEKRRLSVEWARGERGR--------HHDG-SKANQKPTKTLFVINFDPIRTRVR 106
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
D++ H G+V ++ R+ V + +D A++ + S+ + +R
Sbjct: 107 DIEKHFEPYGNVLHVRIRRN----FAFVQFETQEDATKALECTNMSKILDRVVSVEYALR 162
Query: 184 EYDHRRDGSQSPSRGRSYSRGRSESRSRSRS---RGRSYSRSRSQSKSPKAKSSRRSPDR 240
+ R D SP R Y R S R R RS R P RRSPD
Sbjct: 163 DDGERGDNYDSPRRRGGYERSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDM---RRSPDY 219
Query: 241 SRSRSAS----RSRSGSKPRS 257
R RS RS KPRS
Sbjct: 220 GRHRSPDYGRRRSPDYGKPRS 240
>gi|116786163|gb|ABK24003.1| unknown [Picea sitchensis]
Length = 289
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 114/272 (41%), Gaps = 51/272 (18%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+ LY GN+ ++R+ E+E LF KYG + +D+K GYAFV E+ RDAEDAIR D
Sbjct: 2 KPLYCGNIEYEVRQSEIERLFGKYGRVERVDMK-----SGYAFVYMEDERDAEDAIRALD 56
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL---------- 116
+F R R+ + + H+ RG+ R + R VTGL
Sbjct: 57 KTEFGRQRRRLTVE-----------WTKHAE---RGLRRSEDGRRSVTGLKPTKTLFVIN 102
Query: 117 --PSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
P +DL+ H G V ++ R+ + + +Y + A K D +
Sbjct: 103 FDPYDTRARDLERHFEPYGKVLNVRIRRNFA-------FIHYGTQEEATKAFDATHMSTL 155
Query: 175 FSRAYV---RVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSR---------S 222
R RE +RR G SP RG Y R SE R RS Y R
Sbjct: 156 LDRVITVEYAQREDGNRRGGPSSPIRGGRYGRS-SEDHGRDRSASPIYGRRAMRGSPDYG 214
Query: 223 RSQSKSPKAKSSRRSPDRSRSRSASRSRSGSK 254
R+ S + + R SPD R+ S SR K
Sbjct: 215 RAPSPTYARRPERCSPDYGRATSPIYSRRPEK 246
>gi|344229776|gb|EGV61661.1| hypothetical protein CANTEDRAFT_135600 [Candida tenuis ATCC 10573]
Length = 228
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 27/173 (15%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
SR ++V L E+E+ F G IA + + GYAFV FEE A+ A+
Sbjct: 34 SRKVFVRPLDYQTPTEEIEEFFAPAGAIAEVQMMR-----GYAFVSFEEDGAAQKAVDEF 88
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDL 125
+ DF G L VELA R R R +YRV VT LP +WQD
Sbjct: 89 NNTDFHGQPLIVELA------------------RERKEDTRGKYRVKVTNLPDGTAWQDF 130
Query: 126 KDHMR-RAGDV-CFSQVFRD-GSG-TTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
KD +R + G F++V+RD SG G +++ D+++ AI L+ SEF+ A
Sbjct: 131 KDFVRDKTGTTPTFAKVYRDYDSGEVIGALEFGARDELEGAIPVLNGSEFQGA 183
>gi|313227858|emb|CBY23007.1| unnamed protein product [Oikopleura dioica]
Length = 336
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 78/147 (53%), Gaps = 14/147 (9%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++GNL R+VED F K+G I I LK G+ FVEF++ RDAEDAI +G
Sbjct: 4 VFIGNLTDRAEGRDVEDAFRKFGRIKEISLK-----NGFGFVEFDDVRDAEDAIHEMNGE 58
Query: 69 DFDGHRLRVELAH------GGRGRSSSDRHSSHSSGR--GRGVSRRSEYRVLVTGLPSSA 120
G R+ VELA R RS S SSH R GR R+ Y V+V L S
Sbjct: 59 RLCGDRITVELAKGGGGGGRDRSRSRSRGRSSHWDSRRSGRERPHRTPYAVMVDNLSSRC 118
Query: 121 SWQDLKDHMRRAGDVCFSQV-FRDGSG 146
+W +LKD R+ G+V ++ +R G G
Sbjct: 119 TWAELKDIFRKFGEVTYTDAHYRSGDG 145
>gi|255645349|gb|ACU23171.1| unknown [Glycine max]
Length = 259
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 114/261 (43%), Gaps = 32/261 (12%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG I +D+K G+AFV +E+ RDAE+AIR D
Sbjct: 2 RPIFAGNLEYDTRQSELERLFAKYGRIDRVDMKS-----GFAFVFYEDERDAEEAIRALD 56
Query: 67 GYDFDGH---RLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
F GH RL VE A G RGR H G + + ++ ++ P +
Sbjct: 57 NVPF-GHEKRRLSVEWARGERGR--------HHDG-SKANQKPTKTLFVINFDPIRTRVR 106
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
D++ H G+V ++ R+ V + +D A++ + S+ + +R
Sbjct: 107 DIEKHFEPYGNVLHVRIRRN----FAFVQFETQEDATKALECTNMSKILDRVVSVEYALR 162
Query: 184 EYDHRRDGSQSPSRGRSYSRGRSESRSRSRS---RGRSYSRSRSQSKSPKAKSSRRSPDR 240
+ R D SP R Y R S R R RS R P RRSPD
Sbjct: 163 DDGERGDNYDSPRRRGGYERSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDM---RRSPDY 219
Query: 241 SRSRSAS----RSRSGSKPRS 257
R RS RS KPRS
Sbjct: 220 GRHRSPDYGRRRSPDYGKPRS 240
>gi|222137598|gb|ACM45326.1| rbp1-like RNA-binding protein PC [Bombyx mori]
Length = 91
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + + E+E +F KYG I ++ + PPG+AFVEFE+ RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYDFDGHRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|222137600|gb|ACM45327.1| rbp1-like RNA-binding protein PD [Bombyx mori]
Length = 117
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + + E+E +F KYG I ++ + PPG+AFVEFE+ RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYDFDGHRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|221056122|ref|XP_002259199.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809270|emb|CAQ39972.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPG--YAFVEFEEARDAEDAIRGRD 66
+YVGN+PG + E+ F ++G I ID+K G YAF+E+E A+ ++ ++
Sbjct: 10 VYVGNIPGSTTKEEIIKAFQEFGKITGIDIKYNRNANGTNYAFIEYENYESAKKTVQKKN 69
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRG-----RGVSRRSEYRVLVTGLPSSAS 121
G +F G+ L+VE + + + +G R RS YRV+V P
Sbjct: 70 GQNFMGNMLKVEYTNDKKNKEGHIIPVGKEKLKGFMRNLRLPRNRSNYRVVVKNFPKRKI 129
Query: 122 WQD-LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYV 180
D +K + +AG V +Q+ I +Y + + M A+ LD + + N S+ YV
Sbjct: 130 QLDYVKKFLMKAGKVIHTQL----EDEITIAEYDSKEGMLRAVNTLDRTLYNNR-SKVYV 184
Query: 181 RV 182
RV
Sbjct: 185 RV 186
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AFVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F KYGP+ +I + PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGSSASKHELEGKFSKYGPLRNI--WVARNPPGFAFVEFEDPRDAEDAVRGLDGV 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 HLCGTRVRVEM 81
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSS-HSSGRG 100
DG G R+RVE+++G R R +SSGRG
Sbjct: 68 DGTRCCGTRVRVEMSNGRSRRGGGRRGPMRYSSGRG 103
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L ++E+ED F YGP+ ++ + PPG+AFVEFE+ARDAEDAIRG DG
Sbjct: 10 VYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGR 67
Query: 69 DFDGHRLRVELAHGGRG 85
G R RVE+++G G
Sbjct: 68 TICGRRARVEMSNGKSG 84
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L ++E+ED F YGP+ ++ + PPG+AFVEFE+ARDAEDAIRG DG
Sbjct: 10 VYVGDLGNSASKQELEDAFRYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGR 67
Query: 69 DFDGHRLRVELAHGGRG 85
G R RVE+++G G
Sbjct: 68 TICGRRARVEMSNGKSG 84
>gi|389609451|dbj|BAM18337.1| RNA-binding protein 1 [Papilio xuthus]
Length = 141
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + + E+E +F KYG I ++ + PPG+AFVEFE+ RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYDFDGHRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|115361548|gb|ABI95863.1| RNA-binding protein [Bombyx mori]
Length = 142
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + + E+E +F KYG I ++ + PPG+AFVEFE+ RDAED++RG
Sbjct: 10 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYDFDGHRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 68 DGTRCCGTRIRVEMSNG 84
>gi|195394324|ref|XP_002055795.1| GJ10582 [Drosophila virilis]
gi|194142504|gb|EDW58907.1| GJ10582 [Drosophila virilis]
Length = 140
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ I PPG+AFVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKFEIENAFNKYGPLRNV--WIARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 DFDGHRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +EVED F +YG I + + RPPG+AFVEFE++RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEVEDAFSRYGRIRKV--WVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 1 MSSRASR-----TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEA 55
MS + SR +YVG L + ++E+ED F YGP+ ++ + PPG+AFVEF++A
Sbjct: 1 MSKKMSRYPHDAKVYVGELGNNASKQEIEDAFSYYGPLRNV--WVARNPPGFAFVEFDDA 58
Query: 56 RDAEDAIRGRDGYDFDGHRLRVELA 80
RDAED++RG DG G R+RVEL+
Sbjct: 59 RDAEDSVRGLDGRTVCGRRVRVELS 83
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE++RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIETAFSKYGPLRNV--WVARNPPGFAFVEFEDSRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|50303265|ref|XP_451574.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640706|emb|CAH01967.1| KLLA0B00979p [Kluyveromyces lactis]
Length = 342
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 30/166 (18%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L+V P D+ + E++++F +G + I + G+AFVEFEEA A AI+ G
Sbjct: 54 LFVKPFPPDVTDAEMKEIFEPFGALKEIKILN-----GFAFVEFEEAESASQAIQNVAGK 108
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
F + L V + + R +RV++ LP +WQ+LKD
Sbjct: 109 MFADYPLEVVFSKKLKPR----------------------FRVIIRNLPEGCAWQELKDL 146
Query: 129 MR-RAGDVCFSQV-FRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
R + FS V RD G TG +++ + ++ AI+KL++ EFR
Sbjct: 147 ARDNQLETTFSSVNTRDFDG-TGALEFPTEEILQEAIEKLNNIEFR 191
>gi|170033187|ref|XP_001844460.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873739|gb|EDS37122.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 159
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDACRSLDGQ 70
Query: 69 DFDGHRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|428673321|gb|EKX74234.1| conserved hypothetical protein [Babesia equi]
Length = 394
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 19/182 (10%)
Query: 6 SRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
SRT +++GNL G++ + E+ F +G I +D + +AFV++ RDAE AI+
Sbjct: 184 SRTKIFIGNLTGEVSQEELTTKFSTFGHINKVDFRRK-----FAFVDYARPRDAEIAIKE 238
Query: 65 RDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+G + G RL+V+ +++ R + + + V L + SWQD
Sbjct: 239 MNGKTYWGSRLKVQPHIEQPKKNTMTREPNPAC------------QATVLNLDQTVSWQD 286
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF-RNAFSRAYVRVR 183
LKD R+AGDV ++ + G G++++ + + +A K+L + N ++ V
Sbjct: 287 LKDFARQAGDVVYASIVTKGQRRFGLIEFADEATVINACKELSGKKIANNKLEIVHMPVS 346
Query: 184 EY 185
EY
Sbjct: 347 EY 348
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AFVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|356559961|ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
max]
Length = 264
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 110/250 (44%), Gaps = 29/250 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG I +D+K G+AFV +E+ RDAE+AIR D
Sbjct: 2 RPIFAGNLEYDTRQSELERLFSKYGRIDRVDMKS-----GFAFVYYEDERDAEEAIRALD 56
Query: 67 GYDFDGH---RLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
F GH RL VE A G RGR H G + + ++ ++ P +
Sbjct: 57 NVPF-GHEKRRLSVEWARGERGR--------HRDG-SKANQKPTKTLFVINFDPIRTRVR 106
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
D++ H G+V ++ R+ V + +D AI+ + S+ + +R
Sbjct: 107 DIEKHFEPYGNVLHVRIRRN----FAFVQFETQEDATKAIECTNMSKILDRVVSVEYALR 162
Query: 184 EYDHRRDGSQSPSRGRSYSRGRSESRSRSRS---RGRSYSRSRSQSKSPKAKSSRRSPDR 240
+ R D SP RG Y R S R R RS R P RRSPD
Sbjct: 163 DDGERGDNYDSPRRG-GYERSPSPYHRRPSPDYGRPRSPVYDRYNGGGP---DRRRSPDY 218
Query: 241 SRSRSASRSR 250
R RS R
Sbjct: 219 GRHRSPDYGR 228
>gi|357623469|gb|EHJ74606.1| rbp1-like RNA-binding protein PB [Danaus plexippus]
Length = 156
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + + E+E +F KYG I ++ + PPG+AFVE+E+ RDAED++RG DG
Sbjct: 13 VYVGNLGTNASKYEIEKVFSKYGSIRNV--WVARNPPGFAFVEYEDPRDAEDSVRGLDGT 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSG 98
G R+RVE+++ GR+ DR S S+
Sbjct: 71 RCCGTRIRVEMSN---GRTRRDRRSILSTN 97
>gi|357145457|ref|XP_003573649.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like
[Brachypodium distachyon]
Length = 277
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG + +D+K G+AFV E+ RDAEDAI D
Sbjct: 2 RPIFCGNLDYDARQSEIERLFSKYGRVERVDIKT-----GFAFVYMEDERDAEDAIHRLD 56
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
DF G RLRVE R GR + + S S + ++ ++ P S
Sbjct: 57 RTDFGRKGRRLRVEWTKEDRSGGRKGNPKRSPTS-------VKPTKTLFVINFDPISTRT 109
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G + ++ R+ V Y + +D A+ + S + +
Sbjct: 110 RDLEKHFDQYGKIANIRIRRN----FAFVQYESQEDATKALDGTNGSTLMDRVISVEYAL 165
Query: 183 REYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYS 220
R+ D +R+G RG GR S R +RGRS S
Sbjct: 166 RDDDEKRNGYSPERRG-----GRDRSPDRRDNRGRSGS 198
>gi|116784190|gb|ABK23251.1| unknown [Picea sitchensis]
Length = 299
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 110/257 (42%), Gaps = 40/257 (15%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+ LY GN+ +R+ E+E LF +YG + +D+K GYAF+ E+ RDAEDAIRG D
Sbjct: 2 KPLYCGNIEYAVRQIEIERLFGRYGRVDRVDMK-----SGYAFIYMEDERDAEDAIRGLD 56
Query: 67 GYDFDGHRLRVEL---AHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL-PSSASW 122
DF R R+ + H RG GR + V P S
Sbjct: 57 NTDFGRQRRRLTVEWTKHADRG------FRRFEDGRRSDAGLNPTKTLFVINFDPYSTKV 110
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H G + + ++ R+ + + Y+ + A K L+ + R V
Sbjct: 111 RDLERHFEPYGKLIYVRIRRNFA-------FVQYESQEDATKALESTHMSKMLDR--VIT 161
Query: 183 REYDH-----RRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRS 237
EY RR G SP + R Y + ++ R R RS Y R + R S
Sbjct: 162 VEYAQGEDSDRRGGYSSPIQSRRYGKA-ADVRDRDRSASPRYGR----------RPVRGS 210
Query: 238 PDRSRSRSASRSRSGSK 254
PD R+RS +RS +
Sbjct: 211 PDYGRARSPIYARSSER 227
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AFVEFE+ARDAEDA++ DG
Sbjct: 12 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVE++H
Sbjct: 70 RICGVRARVEISH 82
>gi|359490360|ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
vinifera]
Length = 480
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GN D R+ ++E LF +YG + +D+K G+AF+ E+ RDAEDAIRG D
Sbjct: 4 RPIFCGNFDYDARQSDLERLFRRYGKVDRVDMKT-----GFAFIYMEDERDAEDAIRGLD 58
Query: 67 --GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
G+ G RLRVE RG S+ R ++ ++ P + +D
Sbjct: 59 RTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTN-----LRPAKTLFVINFDPYNTRTRD 113
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
L+ H G + ++ R+ + Y + +D A++ + S+ + VR+
Sbjct: 114 LERHFDPYGKILNIRIRRN----FAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRD 169
Query: 185 YDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP 229
D RR+G SP R R +S RS +GRS S R + SP
Sbjct: 170 DDERRNG-YSPD-----GRRRDKSSERSYDKGRSLSPYRRERGSP 208
>gi|380012960|ref|XP_003690540.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 191
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|147863191|emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
Length = 479
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GN D R+ ++E LF +YG + +D+K G+AF+ E+ RDAEDAIRG D
Sbjct: 2 RPIFCGNFDYDARQSDLERLFRRYGKVDRVDMKT-----GFAFIYMEDERDAEDAIRGLD 56
Query: 67 --GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
G+ G RLRVE RG S+ R ++ ++ P + +D
Sbjct: 57 RTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTN-----LRPAKTLFVINFDPYNTRTRD 111
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
L+ H G + ++ R+ + Y + +D A++ + S+ + VR+
Sbjct: 112 LERHFDPYGKILNIRIRRN----FAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRD 167
Query: 185 YDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP 229
D RR+G SP R R +S RS +GRS S R + SP
Sbjct: 168 DDERRNG-YSPD-----GRRRDKSSERSYDKGRSLSPYRRERGSP 206
>gi|393904920|gb|EFO17802.2| hypothetical protein LOAG_10698 [Loa loa]
Length = 133
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AFVEFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|242023192|ref|XP_002432020.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
gi|212517371|gb|EEB19282.1| transformer-2 sex-determining protein, putative [Pediculus
humanus corporis]
Length = 132
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + + E+E +F KYGP+ ++ + PPG+AF+EFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNNGSKYELECIFSKYGPLRNV--WVARNPPGFAFIEFEDPRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVELAHG 82
DG G R RVE++ G
Sbjct: 68 DGSRMCGTRARVEMSSG 84
>gi|406606952|emb|CCH41674.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 267
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 30/166 (18%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L++ LP DI+E E++D F G + I + G+AFVE+ A DA+ A+ +G
Sbjct: 11 LFIRPLPFDIKEEEIKDFFGPIGEVKEIVIN-----NGFAFVEYNIADDAKRAVEELNGK 65
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
F + ++ + +RR +RVLVTG+ A WQDLKD
Sbjct: 66 QFIDAPIEIQFSR----------------------ARRERHRVLVTGIAEGAQWQDLKDF 103
Query: 129 MRRAG-DVCFSQVF-RDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
+ G +V ++ V RD G TG++++ + AI KL+ ++FR
Sbjct: 104 VVDQGFEVTYANVHTRDNDG-TGVLEFPTEEQSADAIAKLNGADFR 148
>gi|41323931|gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
Length = 478
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GN D R+ ++E LF +YG + +D+K G+AF+ E+ RDAEDAIRG D
Sbjct: 2 RPIFCGNFDYDARQSDLERLFRRYGKVDRVDMKT-----GFAFIYMEDERDAEDAIRGLD 56
Query: 67 --GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
G+ G RLRVE RG S+ R ++ ++ P + +D
Sbjct: 57 RTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTN-----LRPAKTLFVINFDPYNTRTRD 111
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
L+ H G + ++ R+ + Y + +D A++ + S+ + VR+
Sbjct: 112 LERHFDPYGKILNIRIRRN----FAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRD 167
Query: 185 YDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP 229
D RR+G SP R R +S RS +GRS S R + SP
Sbjct: 168 DDERRNG-YSPD-----GRRRDKSSERSYDKGRSLSPYRRERGSP 206
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|328793355|ref|XP_001123058.2| PREDICTED: RNA-binding protein 1-like [Apis mellifera]
Length = 150
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 14 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 71
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 72 DGTRCCGTRVRVEM 85
>gi|225711430|gb|ACO11561.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 186
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 84/170 (49%), Gaps = 24/170 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D+ EV ++F KY D+ + R +AFVEF+ RDA+ A+ DG
Sbjct: 19 VYVGGLPSDVTTSEVGEIFAKYR--NRFDVVLKTR---FAFVEFDHNRDADHALERLDGT 73
Query: 69 DFDGHRLRVELAHGGRG------RSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSAS 121
F G R+ VE+A G + R DR + ++ + G ++Y+++
Sbjct: 74 LFRGQRIVVEIARGPKTADKYLFRGGMDREPTQATWVQKYGAPEITQYKLI--------- 124
Query: 122 WQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
DLK MR+AG V ++Q R+ GIV + N DM AI DD E
Sbjct: 125 --DLKALMRKAGRVTYAQAHRNNL-REGIVCFENKHDMLRAIDIFDDYEL 171
>gi|388506284|gb|AFK41208.1| unknown [Medicago truncatula]
Length = 249
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 115/254 (45%), Gaps = 30/254 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG I +D+K G+AFV +E+ RDAE+AIR D
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMKS-----GFAFVYYEDERDAEEAIRALD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
F D RL VE A G RGR H G + + ++ ++ P D
Sbjct: 57 NIPFGHDKRRLSVEWARGERGR--------HRDG-SKPNQKPTKTLFVINFDPIRTRVSD 107
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
++ H + G + ++ R+ + + Y+ + A K L+ + R V V E
Sbjct: 108 IERHFKPYGPLHHVRIRRNFA-------FVQYETQEDATKALECTNMSKILDRV-VSV-E 158
Query: 185 YDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP-----KAKSSRRSPD 239
Y R D + + G S RG +RS S R S + +SP RRSPD
Sbjct: 159 YALRDDSDRVDNYGGSPRRGGGLARSPSPGYRRRPSPDYGRPRSPVYDRYTGPDRRRSPD 218
Query: 240 RSRSRSASRSRSGS 253
R+RS R+ S
Sbjct: 219 YGRNRSPDYGRNRS 232
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium
castaneum]
Length = 129
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVELAH 81
DG G R+RVE+++
Sbjct: 68 DGTRCCGTRVRVEMSN 83
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium
castaneum]
Length = 111
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVELAH 81
DG G R+RVE+++
Sbjct: 68 DGTRCCGTRVRVEMSN 83
>gi|357514487|ref|XP_003627532.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355521554|gb|AET02008.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 301
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 114/254 (44%), Gaps = 30/254 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG I +D+K G+AFV +E+ RDAE+AIR D
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMK-----SGFAFVYYEDERDAEEAIRALD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
F D RL VE A G RGR H G + + ++ ++ P D
Sbjct: 57 NIPFGHDKRRLSVEWARGERGR--------HRDG-SKPNQKPTKTLFVINFDPIRTRVSD 107
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
++ H + G + ++ R+ + + Y+ + A K L+ + R V E
Sbjct: 108 IERHFKPYGPLHHVRIRRNFA-------FVQYETQEDATKALECTNMSKILDR--VVSVE 158
Query: 185 YDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP-----KAKSSRRSPD 239
Y R D + + G S RG +RS S R S + +SP RRSPD
Sbjct: 159 YALRDDSDRVDNYGGSPRRGGGLARSPSPGYRRRPSPDYGRPRSPVYDRYTGPDRRRSPD 218
Query: 240 RSRSRSASRSRSGS 253
R+RS R+ S
Sbjct: 219 YGRNRSPDYGRNRS 232
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F K+GP+ ++ + PPG+AFVEFE++RDAEDA R DG
Sbjct: 29 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 86
Query: 69 DFDGHRLRVELAH 81
G R+RVE++H
Sbjct: 87 RLCGTRVRVEMSH 99
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M S +YVG+L ++E+E+ F YGP+ ++ + PPG+AFVEFE+ RDAED
Sbjct: 1 MPSSLDCKVYVGDLGSGASKQELEEAFSYYGPLRNV--WVARNPPGFAFVEFEDVRDAED 58
Query: 61 AIRGRDGYDFDGHRLRVELAHG 82
A+RG DG G R+RVEL+ G
Sbjct: 59 AVRGLDGRTICGRRVRVELSTG 80
>gi|328777414|ref|XP_003249337.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 177
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|255728963|ref|XP_002549407.1| predicted protein [Candida tropicalis MYA-3404]
gi|240133723|gb|EER33279.1| predicted protein [Candida tropicalis MYA-3404]
Length = 283
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 27/175 (15%)
Query: 4 RASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIR 63
+S+ L+V L ++ +V+D F + P+ + L GYAFV FE DA+ AI
Sbjct: 6 ESSKQLFVRPLAYEVTSEQVQDHFSRAAPVVDVRLM-----EGYAFVTFENEEDAKQAIE 60
Query: 64 GRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
+ +G +L++E A R R R +YR+ +T LP +WQ
Sbjct: 61 LLGETELNGVKLQIEFA------------------RERKEDTRGKYRLSITNLPEGTAWQ 102
Query: 124 DLKDHMRRAGD--VCFSQVFR--DGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
D+KD +R + V + +VF + + TT + + + +D++ AI LD S F +
Sbjct: 103 DVKDFVREKTNSPVNYVKVFTNYETNETTCSLQFESAEDLEKAIPLLDKSIFNDV 157
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 14 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 71
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 72 DGTRCCGTRVRVEM 85
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 41 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 98
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 99 DGTRCCGTRVRVEM 112
>gi|389582698|dbj|GAB65435.1| pre-mRNA splicing factor, partial [Plasmodium cynomolgi strain B]
Length = 450
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 100 GRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDM 159
G G R+E+R++++ LP S WQ LKD MR+ GDV ++ + R G+V++ N DDM
Sbjct: 10 GNGPPVRTEHRIIISNLPESCKWQHLKDAMRQCGDVGYANIER----GKGVVEFINRDDM 65
Query: 160 KHAIKKLDDSEFR 172
+AI+K D SEF+
Sbjct: 66 LYAIEKFDGSEFK 78
>gi|195338789|ref|XP_002036006.1| GM13734 [Drosophila sechellia]
gi|194129886|gb|EDW51929.1| GM13734 [Drosophila sechellia]
Length = 226
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R +YVG+L + R+ ++E +F YG + + I PPG+AFVEFE ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYDFDGHRLRVELAHGGRGRS 87
G G R RVEL+ G RS
Sbjct: 66 GRTVCGRRARVELSTGKYARS 86
>gi|410953846|ref|XP_003983581.1| PREDICTED: serine/arginine-rich splicing factor 6 [Felis catus]
Length = 318
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 23/164 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK + + GR
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLK--------------------NGVPGRRCL 43
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSASWQDLKD 127
+LR + G G S +SGR + G R+E+R++V L S SWQDLKD
Sbjct: 44 HACPGQLR-DAGARGLGCGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKD 102
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 103 FMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 145
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 77/160 (48%), Gaps = 32/160 (20%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
AS +Y+G LP RER+VED F YG I I LK G+ FVEF++ RDA+DA+
Sbjct: 88 ASSRVYIGRLPYRARERDVEDFFKGYGRIREILLK-----NGFGFVEFDDPRDADDAVYH 142
Query: 65 RDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRG----RGVS---------------R 105
+G + G R+ VE+ R R + SS RG RG S
Sbjct: 143 LNGRELCGERIIVEMTK----RPPKGRDAFRSSYRGSYGSRGFSPERRRRDRDDKYGPPS 198
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGS 145
++ +R +V+ + + SWQ H+R A CF F G+
Sbjct: 199 QTPWRCIVSNVSTRVSWQ----HLRMAQAKCFQIFFSTGN 234
>gi|170596504|ref|XP_001902788.1| RNA-binding protein. [Brugia malayi]
gi|158589316|gb|EDP28363.1| RNA-binding protein., putative [Brugia malayi]
Length = 130
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AFVEFE++RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKV--WVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIEGKFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGIHLCGTRVRVEM 81
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AFVEFE+ARDAEDA++ DG
Sbjct: 21 VYVGGLPQDATSQELEDAFNRFGRIRKV--WVARRPPGFAFVEFEDARDAEDAVKALDGT 78
Query: 69 DFDGHRLRVELAH 81
G R RVE++H
Sbjct: 79 RICGVRARVEISH 91
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L + ++E+ED F YGP+ ++ + PPG+AFVEFE+ARDAED++RG DG
Sbjct: 10 VYVGELGNNASKQEIEDAFSYYGPLRNV--WVARNPPGFAFVEFEDARDAEDSVRGLDGR 67
Query: 69 DFDGHRLRVELA 80
G R RVEL+
Sbjct: 68 TICGRRARVELS 79
>gi|217071698|gb|ACJ84209.1| unknown [Medicago truncatula]
Length = 294
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 114/253 (45%), Gaps = 23/253 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+ ++ GNL D R+ +VE LF KYG I +DLK G+AF+ E RDAE AIR D
Sbjct: 2 KPIFCGNLDFDARQSDVERLFRKYGKIDRVDLKS-----GFAFIYMEGERDAEYAIRRLD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+F G R+RVE R +R S S + ++ S+ ++ P +D
Sbjct: 57 QTEFGRKGRRIRVEWTKAER----DNRRSGGDSKKSSTNTKPSKTLFIINFDPVHTRTRD 112
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
L+ H G + ++ R+ + + ++ A++ + S+F + +R+
Sbjct: 113 LERHFDPYGKISNLRIRRN----FAFIQFETQEEATKALEATNLSKFMDRVITVEYAIRD 168
Query: 185 YDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSPDRSR-S 243
D +RDG RGR GR R GR Y R RS S + R SPD R S
Sbjct: 169 DDVKRDGYSPDRRGRGSPDGRY---GRGSPDGR-YGRGRSPS---PYRRGRGSPDYGRGS 221
Query: 244 RSASRSRSGSKPR 256
ASR G P+
Sbjct: 222 NPASRPEPGGSPK 234
>gi|301118162|ref|XP_002906809.1| pre-mRNA-splicing factor SF2-like protein [Phytophthora infestans
T30-4]
gi|262108158|gb|EEY66210.1| pre-mRNA-splicing factor SF2-like protein [Phytophthora infestans
T30-4]
Length = 184
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 17/127 (13%)
Query: 66 DGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSG--------------RGRGVSRRSEYRV 111
DG DF G R+RVELA GG R RGR +R+++RV
Sbjct: 2 DGRDFLGGRIRVELARGGSRRDGGGGGGGGGRRGDDDRHGRGGDRFERGRNPPQRTDFRV 61
Query: 112 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
VT LP W+++KD +R G+V + + DGS I ++ +DM+ A+KKLDD+EF
Sbjct: 62 RVTDLPRDVDWRNVKDFLRTGGEVTYCNIEADGS---AIAEFQTKEDMEDAVKKLDDTEF 118
Query: 172 RNAFSRA 178
R ++ R
Sbjct: 119 RGSYVRV 125
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F K+GP+ ++ + PPG+AFVEFE++RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 DFDGHRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + +PPG+AFVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|124802009|ref|XP_001347332.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23494910|gb|AAN35245.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 880
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGN+ RE +V F +YG I H+ K +AF+E+ +A A +A+ +G
Sbjct: 333 IFVGNISSSAREEDVRRRFEQYGDIMHMQWK-----KRFAFIEYYKASHALNALEKENGK 387
Query: 69 DFDGHRLRVEL------AHGGRGRSSSDRHSSHSSG------RGRGVSRRSEYRVLVTGL 116
F G L V+ ++G + + S H S + RR+ R++V +
Sbjct: 388 MFFGEELSVQEHQYNMNSYGYKNDNRSHFHLKVSRNYSPPNFSNESIERRNSLRIVVKNI 447
Query: 117 PSSASWQDLKDHMRRAGDVCFSQVFRD--GSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
ASWQDLKD R G V ++ + D GI+++ N+++ K AI L+ F
Sbjct: 448 DEKASWQDLKDFGREVGSVSYANIVDDYHSKEKFGIIEFYNHENAKDAINILNGKSF 504
>gi|112983196|ref|NP_001037604.1| RNA-binding protein 1 [Bombyx mori]
gi|95115204|gb|ABF55968.1| Rbp1 [Bombyx mori]
Length = 156
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRG 64
S +YVGNL + + E+E +F KYG I ++ + PPG+AFVEFE+ RDAED++RG
Sbjct: 9 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV--WVARNPPGFAFVEFEDPRDAEDSVRG 66
Query: 65 RDGYDFDGHRLRVELAHG 82
DG G R+RVE+++G
Sbjct: 67 LDGTRCCGTRIRVEMSNG 84
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +E+ED F ++G I + + RPPG+AFVEFE++RDAED+++ DG
Sbjct: 12 VYVGGLPQDATSQEIEDAFNRFGRIRKV--WVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVEL+H
Sbjct: 70 RICGVRARVELSH 82
>gi|224136870|ref|XP_002322436.1| predicted protein [Populus trichocarpa]
gi|222869432|gb|EEF06563.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GN D R+ E+E LF +YG + +D+K G+AF+ E+ RDAEDAIRG D
Sbjct: 2 RPIFCGNFEYDARQTELERLFKRYGRVERVDMKS-----GFAFIYMEDERDAEDAIRGLD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+F G RLRVE RG S S+ +R S+ ++ P +D
Sbjct: 57 RVEFGRKGRRLRVEWTKQERGIRRPGGTSRRSTN-----TRPSKTLFVINFDPHHTRTKD 111
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAY---VR 181
L+ H G + ++ R+ + Y+ + A K LD + R
Sbjct: 112 LERHFEPYGRIVSVRIRRN-------FAFVQYEAQEDATKALDATNLSKLLDRVISVEYA 164
Query: 182 VREYDHRRDG 191
VR+ D R+DG
Sbjct: 165 VRDDDERKDG 174
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F KYGP+ ++ + +PPG+AFVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGNSASKHEIESAFSKYGPLRNV--WVARKPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|312089500|ref|XP_003146270.1| hypothetical protein LOAG_10698 [Loa loa]
Length = 111
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AFVEFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLAR--RPPGFAFVEFEDSRDAEDAVKGLDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|158285865|ref|XP_001687957.1| AGAP007325-PB [Anopheles gambiae str. PEST]
gi|157020194|gb|EDO64606.1| AGAP007325-PB [Anopheles gambiae str. PEST]
Length = 124
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 DFDGHRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|118778182|ref|XP_308500.3| AGAP007325-PA [Anopheles gambiae str. PEST]
gi|116132260|gb|EAA04307.3| AGAP007325-PA [Anopheles gambiae str. PEST]
Length = 132
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 DFDGHRLRVELAHG 82
G R+RVE++ G
Sbjct: 71 RCCGTRIRVEMSSG 84
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L + E+++E F YG I + LK G+ FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN-----GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 DFDGHRLRVELAH------------------------GGRGRSSSDRHSSHSSGR----G 100
+ G R+ ++ + GG GR DR+ R G
Sbjct: 60 ELGGDRVILDYSKPRGGGGSGGGYGDRRGGGRVSSYSGGGGRDRFDRYDRGPPRRESRYG 119
Query: 101 RGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDM 159
R S R +RVLV L S SWQDLKD +RR G + +++ + ++ + D+
Sbjct: 120 RPYSTR--HRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHK--RPNEALLCFATPSDL 175
Query: 160 KHAIKKLD 167
K I K D
Sbjct: 176 KRCIDKCD 183
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|294899382|ref|XP_002776614.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239883668|gb|EER08430.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 138
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDD 168
YRV+VT LP ASWQDLKD MR AG+ F++V RDG G G + D++ A++ LDD
Sbjct: 41 YRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDGVGVAG---FAGQSDVERAVRTLDD 97
Query: 169 SEFRNAF-SRAYVRVREYDHRRDG 191
+E ++ F + +RV E+ + G
Sbjct: 98 TEMKSHFGDTSIIRVEEFTDEKHG 121
>gi|345486250|ref|XP_003425431.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
gi|345486252|ref|XP_003425432.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
Length = 163
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Query: 1 MSSR-----ASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEA 55
MSSR S +YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+
Sbjct: 1 MSSRYREWDLSCKVYVGNLGSSASKHEIESAFSKYGPLRNV--WVARNPPGFAFVEFEDP 58
Query: 56 RDAEDAIRGRDGYDFDGHRLRVEL 79
RDAEDA+RG DG G R+RVE+
Sbjct: 59 RDAEDAVRGLDGTRCCGTRVRVEM 82
>gi|281345554|gb|EFB21138.1| hypothetical protein PANDA_005614 [Ailuropoda melanoleuca]
Length = 319
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 24/165 (14%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L ++RE++++ F YG + IDLK G+ E
Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEIDLKN-----GHGTPERXXR------------- 45
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSH-SSGRGR-GVSRRSEYRVLVTGLPSSASWQDLK 126
G V LA G +SS +SGR + G R+E+R++V L S SWQDLK
Sbjct: 46 ---GLGCGVCLARVGVFGGGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSRCSWQDLK 102
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
D MR+AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 103 DFMRQAGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 146
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F K+GP+ ++ + PPG+AFVEFE++RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 DFDGHRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|346466769|gb|AEO33229.1| hypothetical protein [Amblyomma maculatum]
Length = 289
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 66 DGYDFDGHRLRVELAHGGR--GRSSSDRHSSHSSGRGR-GVSRRSEYRVLVTGLPSSASW 122
+G + G R+ VELA G R R +S S R R G R+EY++ V L S SW
Sbjct: 4 NGKELLGDRVSVELARGIRRGADYYRSRAASRSPPRRRYGPPTRTEYQLTVENLSSRVSW 63
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
QDLKD+MR+AG+V ++ R G+V++ Y DMK+A++KLD+++
Sbjct: 64 QDLKDYMRQAGEVTYADAHR-LRRNEGVVEFATYSDMKNALEKLDNTDL 111
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|146414105|ref|XP_001483023.1| hypothetical protein PGUG_04978 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 22/133 (16%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR 105
GYAFV FE + D A+ +G +FDG L+VE A + R
Sbjct: 3 GYAFVTFENSEDTAKAVETMNGTEFDGQTLQVEFA------------------KERKEDT 44
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFRD-GSG-TTGIVDYTNYDDMKH 161
R ++RV VT LP +WQD KD +R ++ F++VFRD SG G +++ + +++
Sbjct: 45 RGQFRVKVTNLPDGTAWQDFKDFVRDKTELTPTFAKVFRDYESGEVIGALEFGSREELDK 104
Query: 162 AIKKLDDSEFRNA 174
A+ LD +EF++
Sbjct: 105 AVPLLDKAEFQDV 117
>gi|62089298|dbj|BAD93093.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 419
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 97 SGRGR-GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTN 155
SGR + G R+EYR++V L S SWQDLKD+MR+AG+V ++ + G G++++ +
Sbjct: 16 SGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHK-GRKNEGVIEFVS 74
Query: 156 YDDMKHAIKKLDDSEF 171
Y DMK A++KLD +E
Sbjct: 75 YSDMKRALEKLDGTEV 90
>gi|62089194|dbj|BAD93041.1| CS0DF038YO05 variant [Homo sapiens]
Length = 326
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 92/221 (41%), Gaps = 64/221 (28%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+++G L RE++VE F YG I IDLK G+ FVEFE+ RDA+DA+ DG
Sbjct: 9 VFIGRLNPAAREKDVERFFKGYGRIRDIDLK-----RGFGFVEFEDPRDADDAVYELDGK 63
Query: 69 DFDGHRLRVE-----LAHGGRGRSSSDRHSSHS--SGRGRGVSRRSEYRVLVTGLPSSAS 121
+ R+ +E G SDR SS + R R+E R++V L S S
Sbjct: 64 ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS 123
Query: 122 WQ---------------------------------------------------DLKDHMR 130
WQ DLKD MR
Sbjct: 124 WQVCILIEYKCGKCHVCTLSNIFSFSSLVFFISCDCLCVPFPLLCLTQLSCVKDLKDFMR 183
Query: 131 RAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
+AG+V F+ R G+V++ +Y D+K+AI+KL E
Sbjct: 184 QAGEVTFADAHRP-KLNEGVVEFASYGDLKNAIEKLSGKEI 223
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L + ++E+ED F YG + ++ + PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 10 VYVGDLGSNASKQELEDAFSYYGSLRNV--WVARHPPGFAFVEFEDPRDAEDAVRGLDGR 67
Query: 69 DFDGHRLRVELAHGGRGR 86
G R RVEL++G R R
Sbjct: 68 TICGRRARVELSNGKRLR 85
>gi|340506876|gb|EGR32928.1| splicing arginine serine-rich 4, putative [Ichthyophthirius
multifiliis]
Length = 243
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L++GNL D +R++E++F KYG + I +K Y F+EF++ RDA+DA+ +
Sbjct: 25 LFIGNLSKDADKRDLENIFKKYGTVKEIKIKATG-SNHYGFIEFQDHRDAKDALDDCNNM 83
Query: 69 DFDGHRLRVELAHGGRGR 86
+F G ++R+E HGG+ R
Sbjct: 84 EFKGKQIRLEFGHGGKRR 101
>gi|315055555|ref|XP_003177152.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
gi|311338998|gb|EFQ98200.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
Length = 371
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 104/244 (42%), Gaps = 81/244 (33%)
Query: 1 MSSRASRTLYVGNLPGD-----------------IREREVEDLF--YKYGPIAHIDLKIP 41
MS +S LY+GNLP + ++++E+ F + G I I L
Sbjct: 1 MSEVSSTRLYLGNLPRNGTLLVLLHPISVTVSPSFNKQDIEEHFGSHGTGKITEIKLMQ- 59
Query: 42 PRPPGYAFVEFEEARDAEDAIRGRD----------------------------------- 66
G+ F+E+E+A DA+D + G
Sbjct: 60 ----GFGFIEYEDAMDAKDVVPGEGTSVVAFTFLDPFIFFPCLFFCLLFIFYPWNDALLI 115
Query: 67 ---------------GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRV 111
G DF G RL V+ A G R R S+ RR+ YR+
Sbjct: 116 LDPSSARFLLQLSVHGTDFKGERLTVQFARGPRRREPFPGPPERSAAP---RPRRTIYRM 172
Query: 112 LVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSE 170
+TGLP + SWQDLKD R++G DV +S+ RD G G V++ N +D++ A++KLD ++
Sbjct: 173 QITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAVEKLDGTD 229
Query: 171 FRNA 174
F+ +
Sbjct: 230 FKGS 233
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L + ++++E+ F YGP+ ++ + PPG+AFVEFE+ARDAEDA+RG DG
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 69 DFDGHRLRVELA 80
G R RVEL+
Sbjct: 68 TISGRRARVELS 79
>gi|242014601|ref|XP_002427975.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212512474|gb|EEB15237.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 106
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAED++RG
Sbjct: 10 SCKVYVGNLGSNASKHEIEAAFSKYGPLRNV--WVARNPPGFAFVEFEDPRDAEDSVRGL 67
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRIRVEM 81
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L ++E+ED F YG + ++ + PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGDLGSSASKQELEDAFSYYGSLQNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 70
Query: 69 DFDGHRLRVELAHG 82
G R+RVEL++G
Sbjct: 71 TLCGRRVRVELSNG 84
>gi|224063963|ref|XP_002301323.1| predicted protein [Populus trichocarpa]
gi|222843049|gb|EEE80596.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+ ++ GNL D R+ +VE LF +YG I +D+K G+AFV E+ RDAEDAIR D
Sbjct: 2 KAIFCGNLDYDARQSDVERLFRRYGRIDRVDMK-----SGFAFVYMEDERDAEDAIRRLD 56
Query: 67 GYDF--DGHRLRVELAHGGR-GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQ 123
+F G RLRVE R + + R SS + + + ++ P +
Sbjct: 57 QTEFGRKGRRLRVEWTKQERDSKPAGSRRSSANMTPSKTL-------FVINFDPIHTRTR 109
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
DL+ H G + +++ R+ V Y +D A++ + S+ + R
Sbjct: 110 DLERHFDPYGKILSTRIRRN----FAFVQYELQEDATKALEATNMSKLMDRVISVEYAAR 165
Query: 184 EYDHRRDGSQSPSRGRSYSRGRSESRSRSRS 214
+ D RR+G RGR S R+ SR RS S
Sbjct: 166 DDDERRNGYSPERRGRDRSPDRNYSRERSPS 196
>gi|402591118|gb|EJW85048.1| hypothetical protein WUBG_04041 [Wuchereria bancrofti]
Length = 141
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG LP D E+E+ F KYG I + L RPPG+AF+EFE++RDAEDA++G DG
Sbjct: 12 VFVGGLPNDASSEELEEAFSKYGRIKKVWLA--RRPPGFAFIEFEDSRDAEDAVKGLDGT 69
Query: 69 DFDGHRLRVELAH 81
G R RVE +H
Sbjct: 70 RICGVRPRVEFSH 82
>gi|307212780|gb|EFN88451.1| RNA-binding protein 1 [Harpegnathos saltator]
Length = 101
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +YVGNL + E+E F K+GP+ ++ + PPG+AFVEFE+ RDAEDA+RG
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKFGPLRNV--WVARNPPGFAFVEFEDPRDAEDAVRGL 67
Query: 66 DGYDFDGHRLRVEL 79
DG G R+RVE+
Sbjct: 68 DGTRCCGTRVRVEM 81
>gi|357609122|gb|EHJ66310.1| arginine/serine-rich splicing factor 7 [Danaus plexippus]
Length = 174
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
MS +YVG+L + + E+ED F YGP+ ++ + PPG+AFVEFE+ RDAED
Sbjct: 1 MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNV--WVARNPPGFAFVEFEDPRDAED 58
Query: 61 AIRGRDGYDFDGHRLRVELAH 81
AIRG DG G R RVE+++
Sbjct: 59 AIRGLDGRTICGRRARVEMSN 79
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis
mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L ++E+ED F YG + ++ + PPG+AFVEFE+ARDAEDAIRG DG
Sbjct: 13 VYVGDLGSGATKQELEDAFSYYGSLRNV--WVARNPPGFAFVEFEDARDAEDAIRGLDGR 70
Query: 69 DFDGHRLRVELAHGGRGRSSS 89
G R RVE ++G R R S
Sbjct: 71 TICGRRARVEPSNGRRLRDRS 91
>gi|367005765|ref|XP_003687614.1| hypothetical protein TPHA_0K00460 [Tetrapisispora phaffii CBS 4417]
gi|357525919|emb|CCE65180.1| hypothetical protein TPHA_0K00460 [Tetrapisispora phaffii CBS 4417]
Length = 409
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 30/168 (17%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L+V P D++E E+ ++F +G + + + G+AFVEFEEA A AI +G
Sbjct: 114 LFVRPFPLDVQESELNEIFTPFGAMKEVKILN-----GFAFVEFEEADSAARAIEEVNGK 168
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
F L V + R + +R YR+ + LP SWQ+LKD
Sbjct: 169 TFAEQPLEVVFS--------------------RIIPKR--YRMTLKNLPEGCSWQELKDL 206
Query: 129 MRRAG-DVCFSQV-FRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNA 174
R + FS V RD G TG +++ + + + A++KL++ EFR A
Sbjct: 207 ARENNLETTFSSVNTRDFDG-TGALEFPSEEVLADALEKLNNIEFRGA 253
>gi|390176510|ref|XP_003736158.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
gi|388858711|gb|EIM52231.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
Length = 259
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R +YVG+L + R+ ++E +F YG + + I PPG+AFVEFE ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYDFDGHRLRVELAHGGRGRS 87
G G R RVEL+ G RS
Sbjct: 66 GRTVCGRRARVELSTGKYARS 86
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus
(Silurana) tropicalis]
Length = 234
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDR 93
>gi|321263009|ref|XP_003196223.1| mRNA binding protein [Cryptococcus gattii WM276]
gi|317462698|gb|ADV24436.1| mRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 275
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 20/235 (8%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G LP +++ +VE+ F + I + L + FVEF+ RDAEDA+ +G
Sbjct: 5 VYLGRLPPGLQKADVEEHFKGFR-IQDVRLMG-----TFGFVEFDSPRDAEDAVHEFNGK 58
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
G + VE R R ++ S RG R+ V+G S+ SWQDLKD+
Sbjct: 59 PLLGESIVVEPTRESRRRDPYEQPRPRPSRRG--------VRINVSGFSSATSWQDLKDY 110
Query: 129 MRRAGD-VCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREYDH 187
R G+ + ++ V + G G+++Y N ++ + AI++L + A + E +
Sbjct: 111 GRLGGNTIIYADVDKRNPG-HGVIEYRNMEEAQEAIRRLAGVDINGAPVTLEIAPAEAEF 169
Query: 188 RRDGSQSPSRGRSYSRGRSESRSRSRSRGRSY----SRSRSQSKSPKAKSSRRSP 238
RD + P R Y R+ R R Y R + P+ + RR+P
Sbjct: 170 DRDFDRRPPPPRDYDDRRAPRDYYDRPPPRDYYDRPPRRHDDRRGPRDYNDRRAP 224
>gi|225470972|ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
vinifera]
Length = 241
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 111/249 (44%), Gaps = 42/249 (16%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GN + R+ ++E LF KYG + +D+K G+AFV FE+ DA+DAIRG D
Sbjct: 2 RPIFCGNFEYETRQSDLERLFSKYGRVERVDMK-----SGFAFVYFEDEHDADDAIRGLD 56
Query: 67 G--YDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGL-PSSASWQ 123
+ +D RL VE A G RGR H G ++R + V P +
Sbjct: 57 NIPFGYDRRRLSVEWAKGERGR--------HREGSRSMANQRPTKTLFVINFDPIRTRIR 108
Query: 124 DLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVR 183
D++ H G V ++ R+ + + Y+ + A K L+ + R V
Sbjct: 109 DIERHFEPYGKVLHVRIRRNFA-------FVQYETQEDATKALECTHMSKILDR--VVSV 159
Query: 184 EYDHRRDGSQ--SPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSPDRS 241
EY R D + SP RG YSR R ES Y R S SP + R SPD
Sbjct: 160 EYALRDDSDKYDSPRRG-GYSR-RGES---------PYGR----SPSPVNRRGRPSPDYG 204
Query: 242 RSRSASRSR 250
R++S R
Sbjct: 205 RAQSPVYDR 213
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+GNL + ++E +F +YGPI ++ + PPG+AFVEFE++RDAEDA++ DG
Sbjct: 13 VYIGNLGSRATKDDIEAVFSRYGPIRNV--WVARNPPGFAFVEFEDSRDAEDAVKALDGT 70
Query: 69 DFDGHRLRVELAH 81
G R+RVE++H
Sbjct: 71 RICGARVRVEMSH 83
>gi|7269400|emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 349
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 17/174 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+ ++ GN D RE ++E LF KYG + +D+K G+AFV E+ RDAEDAIR D
Sbjct: 1 KPVFCGNFEYDAREGDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 55
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
++F G RLRVE G RG D+ S S R R S+ ++ + +D
Sbjct: 56 RFEFGRKGRRLRVEWTKGERG---GDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRD 112
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRA 178
L+ H G + ++ R+ + + Y+ + A + LD S R +
Sbjct: 113 LEKHFEPYGKIVNVRIRRNFA-------FIQYEAQEDATRALDASNNRKLMDKV 159
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
S +Y+GNL + + E+E F KYGP+ + I PPG+AFVEFE+ RDAEDA+RG
Sbjct: 9 SCKVYIGNLGQNGTKHEIEASFTKYGPLK--NTWIARNPPGFAFVEFEDPRDAEDAVRGL 66
Query: 66 DGYDFDGHRLRVELA 80
DG G R+RVE++
Sbjct: 67 DGTRICGVRVRVEMS 81
>gi|363751515|ref|XP_003645974.1| hypothetical protein Ecym_4077 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889609|gb|AET39157.1| hypothetical protein Ecym_4077 [Eremothecium cymbalariae
DBVPG#7215]
Length = 319
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 31/171 (18%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L+V P D++E E+ ++F +G + + + G+AFVEFE+A AE AI +G
Sbjct: 38 LFVRPFPLDVQESELNEIFSPFGALKDVKILN-----GFAFVEFEQAEAAEQAINEVNGK 92
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
F L V + R YRV++ LP +WQ+LKD
Sbjct: 93 SFADQPLDVVYSRKPLPR----------------------YRVIIKNLPEGVAWQELKDL 130
Query: 129 MRRAG-DVCFSQV-FRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR-NAFS 176
R + FS V RD G TG +++ + + ++ A++KL++ +FR NA S
Sbjct: 131 ARDNNLETTFSSVNTRDFDG-TGALEFPSEEVLQDALEKLNNCDFRGNALS 180
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 12/98 (12%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L ++++ED F YGP+ ++ + PPG+AFVEFE+ RDA+DA+RG DG
Sbjct: 13 VYVGDLGSSASKQDLEDAFGYYGPLKNV--WVARHPPGFAFVEFEDPRDADDAVRGLDGR 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRR 106
G R+RVE ++G + GR RGVSRR
Sbjct: 71 SIAGRRVRVEPSNG----------MARRRGRDRGVSRR 98
>gi|156086400|ref|XP_001610609.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797862|gb|EDO07041.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 140
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
S R +Y+GNL + +VE LF K+G I +I + RPPG+AFV FE+ RDA D
Sbjct: 5 FESTEGRKVYIGNLNPEATVEDVESLFSKFGTIGNI--WVARRPPGFAFVTFEDPRDATD 62
Query: 61 AIRGRDGYDFDGHRLRVELAHG 82
AI DG ++ G L+VEL+ G
Sbjct: 63 AIEELDGSEYKGQNLKVELSKG 84
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L ++++ED F YG I ++ + PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 17 IYVGDLGSSASKQDLEDAFSYYGSIRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 69 DFDGHRLRVELAHGG 83
G R+RVEL++ G
Sbjct: 75 SICGRRVRVELSNAG 89
>gi|366992143|ref|XP_003675837.1| hypothetical protein NCAS_0C04830 [Naumovozyma castellii CBS 4309]
gi|342301702|emb|CCC69473.1| hypothetical protein NCAS_0C04830 [Naumovozyma castellii CBS 4309]
Length = 377
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHID-LKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
+++GNL D E ++ D F + G + + + + R G VEF DAE+AIR +G
Sbjct: 80 IFIGNLSFDATEEDLRDFFSQVGEVVNAEVMSYRGRSKGMGTVEFTNPADAEEAIRQYNG 139
Query: 68 YDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
F G + V+ G S + SS + +G Y V LP S +WQ+LKD
Sbjct: 140 VPFMGRDIFVKQDQPPPG-SRQEFKSSEPTQQG--------YEAFVVNLPYSITWQNLKD 190
Query: 128 HMRRAGDVCFSQVFRDGSGTT---GIVDYTNYDDMKHAIKKLDDSEFR 172
R GDV + V D +G + G V Y N +DM AI + +E
Sbjct: 191 IFRECGDVIRADVELDYNGYSRGFGSVIYANEEDMFKAIDSFNGAELE 238
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 102 GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV--FRDGSGTTGIVDYTNYDDM 159
GV + E + + L A+ +DL+D + G+V ++V +R S G V++TN D
Sbjct: 71 GVEKHHENGIFIGNLSFDATEEDLRDFFSQVGEVVNAEVMSYRGRSKGMGTVEFTNPADA 130
Query: 160 KHAIKKLDDSEF 171
+ AI++ + F
Sbjct: 131 EEAIRQYNGVPF 142
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 28/186 (15%)
Query: 10 YVGNLPGDIREREVEDLFYKYGPI--AHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
+V NLP I + ++D+F + G + A ++L G+ V + D AI +G
Sbjct: 175 FVVNLPYSITWQNLKDIFRECGDVIRADVELDYNGYSRGFGSVIYANEEDMFKAIDSFNG 234
Query: 68 YDFDGHRLRV---ELAHGGRGRSSSDRHS------------------SHSSGRGRGVSRR 106
+ +G L V + H +H+ GVS
Sbjct: 235 AELEGRILEVREGKFNHPRDTFDDRRDFDDRRDFDDVPKEEEPVLPPAHNPSFTEGVSGD 294
Query: 107 SE--YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTT---GIVDYTNYDDMKH 161
E V LP S + DL D G++ +++ D +GT+ +V+Y + D
Sbjct: 295 GERNNTVYCNNLPLSTTVPDLYDLFGSVGEIAMAELVYDETGTSTGAAVVEYASQDAADV 354
Query: 162 AIKKLD 167
I KL+
Sbjct: 355 CINKLN 360
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L + ++++E+ F YGP+ ++ + PPG+AFVEFE+ARDAEDA+RG DG
Sbjct: 10 VYVGELGNNASKQDIEEAFGYYGPLRNV--WVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 69 DFDGHRLRVELA 80
G R RVEL+
Sbjct: 68 TISGRRARVELS 79
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L ++++ED F YG I ++ + PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 17 IYVGDLGSSASKQDLEDAFSYYGSIRNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 69 DFDGHRLRVELAHGG 83
G R+RVEL++ G
Sbjct: 75 SICGRRVRVELSNAG 89
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 37/187 (19%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G L + E+++E F YG I + LK G+ FVEF++ RDAEDA+ +G
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGNIRDVLLKN-----GFGFVEFDDKRDAEDAVHDLNGK 59
Query: 69 DFDGHRLRVELAH----------------------GGRGRSSSDRHSSHSSGR-----GR 101
+ G R+ ++ + G GR DR R GR
Sbjct: 60 ELGGERVILDYSKPRGGGGFGGSGGRGGRVSSYSGGAGGRDRYDRFDRGGPPRRESRYGR 119
Query: 102 GVSRRSEYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMK 160
S R +RVLV L S SWQDLKD +RR G + +++ + ++ + D+K
Sbjct: 120 PYSTR--HRVLVENLSSRISWQDLKDQVRRQGVEPTYAEAHK--RPNEALLCFATPSDLK 175
Query: 161 HAIKKLD 167
I+K D
Sbjct: 176 RCIEKCD 182
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R +YVG+L + R+ ++E +F YG + + I PPG+AFVEFE ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYDFDGHRLRVELAHGGRGRS 87
G G R RVEL+ G RS
Sbjct: 66 GRTVCGRRARVELSTGKYARS 86
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R +YVG+L + R+ ++E +F YG + + I PPG+AFVEFE ARDA DA+RG D
Sbjct: 8 RKVYVGDLGNNARKNDLEYVFGAYGSLRSV--WIARNPPGFAFVEFESARDAADAVRGLD 65
Query: 67 GYDFDGHRLRVELAHGGRGRS 87
G G R RVEL+ G RS
Sbjct: 66 GRTVCGRRARVELSTGKYARS 86
>gi|442757015|gb|JAA70666.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 141
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F K+GP+ ++ + PPG+AFVEFE++RDAEDA R DG
Sbjct: 9 VYVGNLGSGAAKHEIEAAFTKFGPLRNV--WVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 69 DFDGHRLRVELAH 81
G R+RVE++H
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+GNL +VE +F KYG + ++ + PPG+AFVEFE++RDAEDA+R DG
Sbjct: 12 VYIGNLATHASRHDVESVFSKYGNLRNV--WVARNPPGFAFVEFEDSRDAEDAVRAVDGS 69
Query: 69 DFDGHRLRVELAHG 82
G R++ E++HG
Sbjct: 70 RICGSRVKCEMSHG 83
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKHEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|291409640|ref|XP_002721124.1| PREDICTED: splicing factor SRp55 homolog [Oryctolagus cuniculus]
Length = 284
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 72 GHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRR 131
G L V+L +G R S D++ G R+EYR++V L S SWQDLKD MR+
Sbjct: 26 GRLLEVDLKNGSRRTSGRDKY---------GPPVRTEYRLIVENLSSRCSWQDLKDFMRQ 76
Query: 132 AGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 77 AGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 115
>gi|195107293|ref|XP_001998248.1| GI23736 [Drosophila mojavensis]
gi|193914842|gb|EDW13709.1| GI23736 [Drosophila mojavensis]
Length = 137
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ I PPG+AFVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WIARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|313233455|emb|CBY24570.1| unnamed protein product [Oikopleura dioica]
Length = 583
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M + ++++GNL R ++E F YG + I LK GY FV+F++ DA+D
Sbjct: 406 MGAGEMHSVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKD 460
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGR-------------------------SSSDRHSSH 95
A++ DG + G ++R+EL++GGR R S S R S +
Sbjct: 461 AVQDLDGKEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFY 520
Query: 96 --SSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV---FRDGSGTTGI 150
++ R G ++++Y + + L SWQDLKD RR G+V + + R G G GI
Sbjct: 521 ERTAYRKYGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSYGEAHDRMRCGPG-RGI 579
Query: 151 VDYT 154
+ +
Sbjct: 580 ICFV 583
>gi|448534987|ref|XP_003870881.1| Npl3 RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355237|emb|CCG24753.1| Npl3 RNA-binding protein [Candida orthopsilosis]
Length = 282
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
M ++ L+V + D+RE ++ + F P+ + L GYAF+ F+ DA +
Sbjct: 1 MEQAPTKQLFVRPIRSDVREEDLIEHFSAAAPVVEVRLM-----EGYAFLTFDNESDAGE 55
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSA 120
A+ G DF +L+VE A + R R +YR+ +TGLP
Sbjct: 56 ALSKFAGTDFRDEQLQVEFA------------------KERKEDTRGKYRLKITGLPEGT 97
Query: 121 SWQDLKDHMR--RAGDVCFSQVFRD-GSGTTGI-VDYTNYDDMKHAIKKLDDSEFRNA 174
+WQD+KD +R + F +VFRD SG T + + +D++ +I LD + F A
Sbjct: 98 AWQDVKDFVRDKTGTEANFVRVFRDYDSGDTICSLQFETGEDLEKSIPLLDKANFGEA 155
>gi|297259798|ref|XP_001084701.2| PREDICTED: hypothetical protein LOC696054 [Macaca mulatta]
Length = 294
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 72 GHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRR 131
G L V+L +G G S R +S G V R+EYR++V L S SWQDLKD MR+
Sbjct: 26 GRLLEVDLKNGCGGGGYSSRRTSGRDKYGPPV--RTEYRLIVENLSSRCSWQDLKDFMRQ 83
Query: 132 AGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEF 171
AG+V ++ ++ + G++++ +Y DMK A+ KLD +E
Sbjct: 84 AGEVTYADAHKERT-NEGVIEFRSYSDMKRALDKLDGTEI 122
>gi|190348431|gb|EDK40880.2| hypothetical protein PGUG_04978 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 22/133 (16%)
Query: 46 GYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR 105
GYAFV FE + D A+ +G +FDG L+VE A + R
Sbjct: 3 GYAFVTFENSEDTAKAVETMNGTEFDGQTLQVEFA------------------KERKEDT 44
Query: 106 RSEYRVLVTGLPSSASWQDLKDHMRRAGD--VCFSQVFRD-GSG-TTGIVDYTNYDDMKH 161
R ++RV VT LP +WQD KD +R + F++VFRD SG G +++ + +++
Sbjct: 45 RGQFRVKVTNLPDGTAWQDFKDFVRDKTESTPTFAKVFRDYESGEVIGALEFGSREELDK 104
Query: 162 AIKKLDDSEFRNA 174
A+ LD +EF++
Sbjct: 105 AVPLLDKAEFQDV 117
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L ++++ED F YGP+ ++ + PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 12 VYVGDLGSSASKQQLEDAFSYYGPLHNV--WVARNPPGFAFVEFEDPRDAEDAVRGLDGR 69
Query: 69 DFDGHRLRVELAHG 82
G R+RVEL++G
Sbjct: 70 IVCGRRIRVELSNG 83
>gi|388494340|gb|AFK35236.1| unknown [Medicago truncatula]
Length = 249
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG I +D+K G+AFV +E+ RDAE+AIR D
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMKS-----GFAFVYYEDERDAEEAIRALD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
F D RL VE A G RGR H G + + ++ ++ P D
Sbjct: 57 NIPFGHDKRRLSVEWARGERGR--------HRDG-SKPNQKPTKTLFVINFDPIRTRVSD 107
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
++ H + G + ++ R+ + + Y+ + A K L+ + R V E
Sbjct: 108 IERHFKPYGPLHHVRIRRNFA-------FVQYETQEDATKALECTNMSKILDR--VVSVE 158
Query: 185 YDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP-----KAKSSRRSPD 239
Y R D + + G S RG +RS S R S + +SP RRSPD
Sbjct: 159 YALRDDSDRVDNYGGSPRRGGGLARSPSPGYRRRPSPDYGRPRSPVYDRYTGPDRRRSPD 218
Query: 240 RSRSRSASRSRS 251
R+ S R+
Sbjct: 219 YGRNGSPDYGRN 230
>gi|194742457|ref|XP_001953719.1| GF17902 [Drosophila ananassae]
gi|190626756|gb|EDV42280.1| GF17902 [Drosophila ananassae]
Length = 163
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|313222821|emb|CBY41772.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 32/161 (19%)
Query: 8 TLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDG 67
++++GNL R ++E F YG + I LK GY FV+F++ DA+DA++ DG
Sbjct: 169 SVFIGNLSDHARHEDIEKFFKGYGSLRDISLK-----GGYGFVQFKDKYDAKDAVQDLDG 223
Query: 68 YDFDGHRLRVELAHGGRGR-------------------------SSSDRHSSH--SSGRG 100
+ G ++R+EL++GGR R S S R S + ++ R
Sbjct: 224 KEICGQKVRIELSNGGRDRTRRGRDSYSRSRSRSRDNSRYSRSTSKSPRRSFYERTAYRK 283
Query: 101 RGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 141
G ++++Y + + L SWQDLKD RR G+V + F
Sbjct: 284 YGAPKKTKYAIEIENLSERVSWQDLKDFFRRVGEVSYDNHF 324
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYG + ++ + PPG+AFVEFE+ RDAEDA+R DG
Sbjct: 14 VYVGNLGSNAARGEIEEAFSKYGTLRNV--WVARNPPGFAFVEFEDPRDAEDAVRALDGV 71
Query: 69 DFDGHRLRVELAHGGR 84
G R++VE++ G R
Sbjct: 72 RLCGARVKVEMSTGKR 87
>gi|297828391|ref|XP_002882078.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
gi|297327917|gb|EFH58337.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++VGN D R+ ++E LF KYG + +D+K GYAFV FE+ RDAEDAIRG D
Sbjct: 2 RPVFVGNFDYDTRQSDLERLFSKYGRVERVDMKS-----GYAFVYFEDERDAEDAIRGTD 56
Query: 67 GYDFDGHR--LRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
F R L VE A G +G R +S + R ++ ++ P +D
Sbjct: 57 NTTFGYERRKLSVEWAKGFKGERGKPRDGKAASNQ-----RPTKTLFVINFDPIRTRERD 111
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIV--DYTNYDDMKHAIKKLD 167
++ H G V ++ R+ + D T D H K LD
Sbjct: 112 MERHFEPYGKVLNVRIRRNFAFVQFATQEDATKALDCTHNSKILD 156
>gi|157117871|ref|XP_001653077.1| RNA-binding protein [Aedes aegypti]
gi|108883341|gb|EAT47566.1| AAEL001356-PA [Aedes aegypti]
Length = 131
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA+R DG
Sbjct: 13 VYVGNLGSSASKHEIESAFGKYGPLRNV--WVARNPPGFAFVEFEDKRDAEDAVRSLDGT 70
Query: 69 DFDGHRLRVELA 80
G R+RVE++
Sbjct: 71 RCCGTRIRVEMS 82
>gi|217072928|gb|ACJ84824.1| unknown [Medicago truncatula]
Length = 242
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 113/252 (44%), Gaps = 30/252 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG I +D+K G+AFV +E+ RDAE+AIR D
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMKS-----GFAFVYYEDERDAEEAIRALD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
F D RL VE A G RGR H G + + ++ ++ P D
Sbjct: 57 NIPFGHDKRRLSVEWARGERGR--------HRDG-SKPNQKPTKTLFVINFDPIRTRVSD 107
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
++ H + G + ++ R+ + + Y+ + A K L+ + R V V E
Sbjct: 108 IERHFKPYGPLHHVRIRRNFA-------FVQYETQEDATKALECTNMSKILDRV-VSV-E 158
Query: 185 YDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSP-----KAKSSRRSPD 239
Y R D + + G S RG +RS S R S + +SP RRSPD
Sbjct: 159 YALRDDSDRVDNYGGSPRRGGGLARSPSPGYRRRPSPDYGRPRSPVYDRYTGPDRRRSPD 218
Query: 240 RSRSRSASRSRS 251
R+ S R+
Sbjct: 219 YGRNGSPDYGRN 230
>gi|399217969|emb|CCF74856.1| unnamed protein product [Babesia microti strain RI]
Length = 385
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGN+P D E++ +F K G + D++ +AF+E+ + A DA+ +GY
Sbjct: 175 VFVGNIPLDTTVDELKAVFEKCGELVKCDMRK-----RFAFIEYHKPESASDALNQLNGY 229
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVS---RRSEYRVLVTGLPSSASWQDL 125
G +++V+ HS +S+ V + Y V V + + SWQDL
Sbjct: 230 ILHGEKIKVKP------------HSDNSNRYREKVPPPRHKPGYAVTVANIEETTSWQDL 277
Query: 126 KDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRN 173
KD R AG+V ++ + G+++Y + K+A+ +L + N
Sbjct: 278 KDFGRLAGEVSYASIVIKDGKKYGVIEYLAPESAKNALVELQGKQITN 325
>gi|324509930|gb|ADY44158.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 136
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VG LP D +E+E+ F +YGPI + + RPPG+AF+EFE++RDA+DA++ +G
Sbjct: 17 VFVGGLPHDATTQELEEAFGRYGPIRKV--WMARRPPGFAFIEFEDSRDADDAVKALNGA 74
Query: 69 DFDGHRLRVELAH 81
G R RVE++H
Sbjct: 75 RICGVRPRVEISH 87
>gi|24641772|ref|NP_572880.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|21064531|gb|AAM29495.1| RE47308p [Drosophila melanogaster]
gi|22832194|gb|AAF48264.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|220948574|gb|ACL86830.1| Rbp1-like-PA [synthetic construct]
gi|220957848|gb|ACL91467.1| Rbp1-like-PA [synthetic construct]
Length = 158
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|198471193|ref|XP_001355529.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
gi|198145808|gb|EAL32588.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
Length = 161
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195478268|ref|XP_002100463.1| GE16161 [Drosophila yakuba]
gi|194187987|gb|EDX01571.1| GE16161 [Drosophila yakuba]
Length = 160
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195129938|ref|XP_002009411.1| GI15337 [Drosophila mojavensis]
gi|193907861|gb|EDW06728.1| GI15337 [Drosophila mojavensis]
Length = 151
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|195045313|ref|XP_001991952.1| GH24472 [Drosophila grimshawi]
gi|193892793|gb|EDV91659.1| GH24472 [Drosophila grimshawi]
Length = 163
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|194895540|ref|XP_001978277.1| GG19507 [Drosophila erecta]
gi|190649926|gb|EDV47204.1| GG19507 [Drosophila erecta]
Length = 159
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|82595824|ref|XP_726007.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481235|gb|EAA17572.1| similar to splicing factor, arginine/serine-rich 4, putative
[Plasmodium yoelii yoelii]
Length = 715
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 29/187 (15%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
++VGN+ D RE EV F KYG I +I K +AF+E+ + AE+AI G +G
Sbjct: 263 IFVGNISPDAREEEVRKKFSKYGDIINIQWKRR-----FAFIEYSKPVYAENAISGENGK 317
Query: 69 DFDGHRLRVELAH---------GGRG----------RSSSDRHS-SHSSGRGRGVSRRSE 108
+ G L V+ H G R+ +++S ++S + + +++
Sbjct: 318 HYMGEELSVQAHHLSPFKNNYNNSYGNVYNNYRNDPRNYENKYSRNYSDNKFESIEKKNS 377
Query: 109 YRVLVTGLPSSASWQDLKDHMRRAG----DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
R++V + SWQDLKD R G + GI++Y NY+ MK AI
Sbjct: 378 LRIVVKNIDEKVSWQDLKDFGREVGLVNYANVVYNNNGNNKEYYGIIEYYNYETMKRAID 437
Query: 165 KLDDSEF 171
L+ +F
Sbjct: 438 VLNGKKF 444
>gi|195451607|ref|XP_002072997.1| GK13897 [Drosophila willistoni]
gi|194169082|gb|EDW83983.1| GK13897 [Drosophila willistoni]
Length = 140
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLKNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG+L + E+E F YGP+ + + PPG+AFVE+E+ARDAEDA++G DG
Sbjct: 16 VYVGDLGNGAAKGELERAFSYYGPLRSV--WVARNPPGFAFVEYEDARDAEDAVKGMDGK 73
Query: 69 DFDGHRLRVELAHG 82
G R+RVEL++G
Sbjct: 74 VLCGARVRVELSNG 87
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 1 MSSRASRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED 60
S +YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAED
Sbjct: 7 FCSLTETKVYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAED 64
Query: 61 AIRGRDGYDFDGHRLRVELAHGGRGRSSSDR 91
A+RG DG G R+RVEL+ G RS DR
Sbjct: 65 AVRGLDGKVICGSRVRVELSTGMPRRSRYDR 95
>gi|374107494|gb|AEY96402.1| FADR183Cp [Ashbya gossypii FDAG1]
Length = 320
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 28/165 (16%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
L+V P D+ E E++++F YG + + L G+AFVEFE+ AE AI+ +G
Sbjct: 39 LHVKPFPPDVEEHELDEIFSPYGALKEVKLMS-----GFAFVEFEKPESAEQAIKDVNGK 93
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKDH 128
F L V + R +R+ + LP +WQ+LKD
Sbjct: 94 MFADMPLTVSYSRMPMPR----------------------FRIKIRNLPEGIAWQELKDL 131
Query: 129 MRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
R + FS V TG +++++ + ++ A++KL++ EFR
Sbjct: 132 ARENNLETTFSSVDTSNFDGTGALEFSSEEILEEALEKLNNYEFR 176
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 41 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 98
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 99 VICGSRVRVELSTGMPRRSRFDR 121
>gi|195628072|gb|ACG35866.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 255
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GN D R+ ++E LF KYGPI+ ID+K+ GYAF+ FE+ RDAEDAIR D
Sbjct: 2 RPVFCGNFDHDTRQYDLERLFSKYGPISRIDMKL-----GYAFIYFEDERDAEDAIRRLD 56
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
F +R R+ + S S R G + + ++ P QD++
Sbjct: 57 NVSFGYNRRRLSVEW-----SRQVEPVPKSRDRPTGDVKPTRTLFVINFDPIRTKVQDIE 111
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
H G + ++ R+ V Y ++ A+K D S
Sbjct: 112 KHFEPYGKIANIRIRRN----FAFVQYETQEEASAAVKNTDKS 150
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 22 VYVGNLGTGAGKGEYERAFSYYGPLRSV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 79
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 80 VICGSRVRVELSTGMPRRSRLDR 102
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 3 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSS 94
G R+RVEL+ G RS DR +
Sbjct: 61 VICGSRVRVELSTGMPRRSRYDRPPA 86
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 41 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 98
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 99 VICGSRVRVELSTGMPRRSRFDR 121
>gi|15235112|ref|NP_194280.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
gi|334186916|ref|NP_001190837.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
gi|4033468|sp|P92965.2|RSP40_ARATH RecName: Full=Arginine/serine-rich-splicing factor RSP40
gi|2582641|emb|CAA67800.1| splicing factor [Arabidopsis thaliana]
gi|2980800|emb|CAA18176.1| splicing factor At-SRp40 [Arabidopsis thaliana]
gi|332659667|gb|AEE85067.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
gi|332659670|gb|AEE85070.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
Length = 350
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
+ ++ GN D RE ++E LF KYG + +D+K G+AFV E+ RDAEDAIR D
Sbjct: 2 KPVFCGNFEYDAREGDLERLFRKYGKVERVDMKA-----GFAFVYMEDERDAEDAIRALD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
++F G RLRVE RG D+ S S R R S+ ++ + +D
Sbjct: 57 RFEFGRKGRRLRVEWTKSERG---GDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRD 113
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
L+ H G + ++ R+ + Y +D A+ ++S+ + V++
Sbjct: 114 LEKHFEPYGKIVNVRIRRN----FAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKD 169
Query: 185 YDHRRDG 191
D R +G
Sbjct: 170 DDARGNG 176
>gi|212722812|ref|NP_001131484.1| uncharacterized protein LOC100192821 [Zea mays]
gi|194691660|gb|ACF79914.1| unknown [Zea mays]
gi|224032781|gb|ACN35466.1| unknown [Zea mays]
gi|413957159|gb|AFW89808.1| arginine/serine-rich splicing factor RSP41 isoform 1 [Zea mays]
gi|413957160|gb|AFW89809.1| arginine/serine-rich splicing factor RSP41 isoform 2 [Zea mays]
gi|413957161|gb|AFW89810.1| arginine/serine-rich splicing factor RSP41 isoform 3 [Zea mays]
Length = 255
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GN D R+ ++E LF KYGPI+ ID+K+ GYAF+ FE+ RDAEDAIR D
Sbjct: 2 RPVFCGNFDHDTRQYDLERLFSKYGPISRIDMKL-----GYAFIYFEDERDAEDAIRRLD 56
Query: 67 GYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLK 126
F +R R+ + S S R G + + ++ P QD++
Sbjct: 57 NVSFGYNRRRLSVEW-----SRQVEPVPKSRDRPTGDVKPTRTLFVINFDPIRTKVQDIE 111
Query: 127 DHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDS 169
H G + ++ R+ V Y ++ A+K D S
Sbjct: 112 KHFEPYGKIANIRIRRN----FAFVQYETQEEASAAVKNTDKS 150
>gi|195168745|ref|XP_002025191.1| GL26725 [Drosophila persimilis]
gi|194108636|gb|EDW30679.1| GL26725 [Drosophila persimilis]
Length = 174
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|308493016|ref|XP_003108698.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
gi|308248438|gb|EFO92390.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
Length = 277
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG LP D +E+E++F ++G I + + RPPG+AFVE+++ RDAEDA+R DG
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKV--WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 69 DFDGHRLRVELAHG 82
G R RVEL+ G
Sbjct: 63 RICGVRARVELSTG 76
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 42 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 99
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 100 VICGSRVRVELSTGMPRRSRFDR 122
>gi|24645769|ref|NP_731510.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|194902212|ref|XP_001980643.1| GG17683 [Drosophila erecta]
gi|195330033|ref|XP_002031713.1| GM23896 [Drosophila sechellia]
gi|195571925|ref|XP_002103951.1| GD18708 [Drosophila simulans]
gi|55584177|sp|Q02427.3|RBP1_DROME RecName: Full=RNA-binding protein 1
gi|17861840|gb|AAL39397.1| GM02602p [Drosophila melanogaster]
gi|23170942|gb|AAN13487.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|190652346|gb|EDV49601.1| GG17683 [Drosophila erecta]
gi|194120656|gb|EDW42699.1| GM23896 [Drosophila sechellia]
gi|194199878|gb|EDX13454.1| GD18708 [Drosophila simulans]
gi|220943202|gb|ACL84144.1| Rbp1-PB [synthetic construct]
gi|220953396|gb|ACL89241.1| Rbp1-PB [synthetic construct]
Length = 144
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F KYGP+ ++ + PPG+AFVEFE+ RDAEDA R DG
Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRALDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|167536851|ref|XP_001750096.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771425|gb|EDQ85092.1| predicted protein [Monosiga brevicollis MX1]
Length = 136
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
SR ++VGNLP DI + ++E+ F ++G + +D+ + +PPG+AFV+FE+ RDAEDA++G
Sbjct: 45 SRQVFVGNLPDDIEKMDLENEFRQFGRL--LDVWVARKPPGFAFVKFEDQRDAEDAVQGL 102
Query: 66 DGYDFDGHRLRVELAH 81
+ G +RVE++H
Sbjct: 103 NRRTAFGREIRVEISH 118
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIAGNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDR 93
>gi|356572371|ref|XP_003554342.1| PREDICTED: uncharacterized protein LOC100789337 [Glycine max]
Length = 297
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 120/252 (47%), Gaps = 52/252 (20%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
LYVG L R R++E +F +YG I +D+K +AFVEF + RDA+DA DG
Sbjct: 13 LYVGRLSSRTRSRDLERVFSRYGRIRGVDMKN-----DFAFVEFSDPRDADDARYSLDGR 67
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW-QDLKD 127
D +G R+ VE A GG R S + GRG R G+ W +D K
Sbjct: 68 DVEGSRIIVEFAKGG------PRGSRENLGRGLPP---GSGRCFNCGI--DGHWARDCK- 115
Query: 128 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVREYDH 187
AGD ++ +R G G ++ + K++ KK S + SR+ VR
Sbjct: 116 ----AGDW-KNKCYR--CGERGHIEK----NCKNSPKKS--SRHGRSLSRSPVR------ 156
Query: 188 RRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRS---QSKSPKAKSSRRSPDRSRSR 244
S SP RGR SR RS SR R+YSRSRS + +SP ++ +SP+ S+ R
Sbjct: 157 ----SHSPRRGR--------SRDRSYSRDRNYSRSRSPVRRERSPVSEDRSQSPEPSKIR 204
Query: 245 SASRSRSGSKPR 256
S S S PR
Sbjct: 205 KHSTSPDQSSPR 216
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDR 93
>gi|20071765|gb|AAH27391.1| Sfrs7 protein [Mus musculus]
gi|148706560|gb|EDL38507.1| mCG17902, isoform CRA_f [Mus musculus]
Length = 157
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|26328639|dbj|BAC28058.1| unnamed protein product [Mus musculus]
Length = 157
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|148706565|gb|EDL38512.1| mCG17902, isoform CRA_k [Mus musculus]
Length = 165
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 21 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 78
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 79 VICGSRVRVELSTGMPRRSRFDR 101
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDR 93
>gi|410339103|gb|JAA38498.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410339105|gb|JAA38499.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|68534386|gb|AAH99175.1| Splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|149050598|gb|EDM02771.1| rCG61762, isoform CRA_a [Rattus norvegicus]
gi|149050599|gb|EDM02772.1| rCG61762, isoform CRA_a [Rattus norvegicus]
Length = 157
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|342326406|gb|AEL23118.1| 52K active chromatin boundary protein [Cherax quadricarinatus]
Length = 169
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVG L + ER++ F YGP+ + + I G+ FVE ++ RDA DA+ +G
Sbjct: 39 VYVGGLYYRVGERDLMRFFLCYGPLGDLVIMI-----GFCFVEIDDYRDAYDAVCYMNGK 93
Query: 69 DFDGHRLRVELAHGG-RGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 127
+ G R +E A R SS G+ + YR+ + L S SWQDLKD
Sbjct: 94 ELLGGRCSMEKARAAPRMMWPRAPPPIGSSSSLFGMPALANYRLTIENLSSRVSWQDLKD 153
Query: 128 HMRRAGDV 135
MR+AG V
Sbjct: 154 FMRQAGKV 161
>gi|30584739|gb|AAP36622.1| Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa
[synthetic construct]
gi|60653769|gb|AAX29578.1| splicing factor arginine/serine-rich 7 35kDa [synthetic
construct]
gi|60653771|gb|AAX29579.1| splicing factor arginine/serine-rich 7 35kDa [synthetic
construct]
Length = 239
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|268531976|ref|XP_002631116.1| C. briggsae CBR-RSP-2 protein [Caenorhabditis briggsae]
Length = 279
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 116/245 (47%), Gaps = 32/245 (13%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+Y+G LP +R+VE F YG ++ + +K G+ FV+F+E RDA+DA+ +G
Sbjct: 4 VYIGRLPNRATDRDVEHFFRGYGKLSDVIMK-----NGFGFVDFQEQRDADDAVHDLNGK 58
Query: 69 DFDGHRLRVELAH------------GGRGRSSSDRHSSH---SSGRGRGVSRRSEYRVLV 113
D G R+ +E G RGR + R S+ R S R +R+++
Sbjct: 59 DLCGERVILEFPRRKVGYNEERSGGGFRGREPTFRRGGERQFSNRYSRPCSTR--FRLVI 116
Query: 114 TGLPSSASWQDLKDHMRRAG-DVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFR 172
L + SWQD+KDH+R+ G + +S+ + +V ++ +DD++ A+ KL E
Sbjct: 117 DNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNV-NQALVCFSTHDDLRDAMNKLQGEELN 175
Query: 173 NAFSRAYVRVREYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQ--SKSPK 230
+++ D RD S+S S R R RS S RS+ S SPK
Sbjct: 176 GR------KLKCTDETRDRSRSRSPRRRSRSRSGSRSRSPPPRRRSPSSGRSKSRSASPK 229
Query: 231 AKSSR 235
+S +
Sbjct: 230 KRSEK 234
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus
rotundus]
Length = 235
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSS 94
G R+RVEL+ G RS DR +
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPA 96
>gi|72534660|ref|NP_001026854.1| serine/arginine-rich splicing factor 7 isoform 1 [Homo sapiens]
gi|307133718|ref|NP_001182515.1| splicing factor, arginine/serine-rich 7 [Macaca mulatta]
gi|307133726|ref|NP_001182519.1| splicing factor, arginine/serine-rich 7 [Pongo abelii]
gi|296224047|ref|XP_002757879.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Callithrix jacchus]
gi|332227248|ref|XP_003262805.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Nomascus leucogenys]
gi|332813155|ref|XP_515421.3| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
troglodytes]
gi|397493583|ref|XP_003817683.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Pan
paniscus]
gi|397493585|ref|XP_003817684.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
paniscus]
gi|402890618|ref|XP_003908580.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Papio anubis]
gi|403269672|ref|XP_003926840.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Saimiri boliviensis boliviensis]
gi|426335282|ref|XP_004029157.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Gorilla gorilla gorilla]
gi|3929380|sp|Q16629.1|SRSF7_HUMAN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor 9G8; AltName: Full=Splicing
factor, arginine/serine-rich 7
gi|506402|gb|AAA35495.1| 9G8 splicing factor [Homo sapiens]
gi|950424|gb|AAA88098.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|12654349|gb|AAH00997.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|16924200|gb|AAH17369.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|17389794|gb|AAH17908.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|18490620|gb|AAH22328.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|27369421|gb|AAN87842.1| arginine/serine-rich splicing factor 7 type B [Homo sapiens]
gi|30582329|gb|AAP35391.1| splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|46981983|gb|AAT08040.1| aging-associated protein 3 [Homo sapiens]
gi|61361883|gb|AAX42119.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|61361888|gb|AAX42120.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|62702176|gb|AAX93102.1| unknown [Homo sapiens]
gi|67970972|dbj|BAE01828.1| unnamed protein product [Macaca fascicularis]
gi|90076474|dbj|BAE87917.1| unnamed protein product [Macaca fascicularis]
gi|119620771|gb|EAX00366.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_d
[Homo sapiens]
gi|261858750|dbj|BAI45897.1| splicing factor, arginine/serine-rich 7, 35kDa [synthetic
construct]
gi|292698389|dbj|BAI99737.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|355565621|gb|EHH22050.1| hypothetical protein EGK_05239 [Macaca mulatta]
gi|355751260|gb|EHH55515.1| hypothetical protein EGM_04737 [Macaca fascicularis]
gi|380815572|gb|AFE79660.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420743|gb|AFH33585.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948778|gb|AFI37994.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|410213320|gb|JAA03879.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251182|gb|JAA13558.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299022|gb|JAA28111.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|224120150|ref|XP_002318257.1| predicted protein [Populus trichocarpa]
gi|222858930|gb|EEE96477.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R+++ GN D R+ E+E LF +YG + +D+K G+AF+ E+ RDAEDAIRG D
Sbjct: 2 RSIFCGNFEYDARQTELERLFKRYGRVERVDMKA-----GFAFIYMEDERDAEDAIRGLD 56
Query: 67 GYDF--DGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASWQD 124
+F G RL VE RG S R +R S+ ++ P +D
Sbjct: 57 RVEFGRKGRRLHVEWTKQERGARQPG-----GSSRKSANTRPSKTLFVINFDPHHTRTKD 111
Query: 125 LKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRVRE 184
L+ H G + ++ R+ + Y+ + A K LD + R V E
Sbjct: 112 LERHFEPYGRIVSVRIRRN-------FAFVQYEAQEDATKALDATNMSKLLYR--VISVE 162
Query: 185 YDHRRDG 191
Y R DG
Sbjct: 163 YAARDDG 169
>gi|354488931|ref|XP_003506619.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Cricetulus griseus]
Length = 227
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 5 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 62
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 63 VICGSRVRVELSTGMPRRSRFDR 85
>gi|348574614|ref|XP_003473085.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Cavia porcellus]
Length = 227
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSS 94
G R+RVEL+ G RS DR +
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPA 96
>gi|297265846|ref|XP_002799299.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 4
[Macaca mulatta]
Length = 208
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSS 94
G R+RVEL+ G RS DR +
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPA 96
>gi|327262673|ref|XP_003216148.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Anolis carolinensis]
Length = 225
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDR 93
>gi|320542033|ref|NP_001188585.1| Rbp1-like, isoform B [Drosophila melanogaster]
gi|318069370|gb|ADV37667.1| Rbp1-like, isoform B [Drosophila melanogaster]
Length = 247
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E+ F KYGP+ ++ + PPG+AFVEFE+ RDAEDA RG DG
Sbjct: 13 VYVGNLGSSASKYEIENAFSKYGPLRNV--WVARNPPGFAFVEFEDRRDAEDATRGLDGT 70
Query: 69 DFDGHRLRVEL 79
G R+RVE+
Sbjct: 71 RCCGTRIRVEM 81
>gi|222622077|gb|EEE56209.1| hypothetical protein OsJ_05182 [Oryza sativa Japonica Group]
Length = 290
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG + +D+K G+AFV E+ RDA++AI D
Sbjct: 13 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMKS-----GFAFVYMEDERDADEAIHRLD 67
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
+F G RLRVE R GR + + S ++ +R ++ ++ P +
Sbjct: 68 RIEFGRKGRRLRVEWTKEDRSGGRRGNSKRSPNN-------TRPTKTLFVINFDPINTRT 120
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G + ++ R+ V Y +D A++ + S + +
Sbjct: 121 RDLERHFDQYGKISNVRIRRN----FAFVQYELQEDATKALEGTNGSTLMDRVISVEYAL 176
Query: 183 REYDHRRDGSQSPSRGRSYSRGRSESRSRSRS 214
R+ D +R+G RGR S R + R RS S
Sbjct: 177 RDDDEKRNGYSPERRGRDRSPDRRDYRGRSAS 208
>gi|306482694|ref|NP_001182375.1| serine/arginine-rich splicing factor 7 isoform 2 [Homo sapiens]
gi|297265844|ref|XP_002799298.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 3
[Macaca mulatta]
gi|332227250|ref|XP_003262806.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Nomascus leucogenys]
gi|390474551|ref|XP_003734800.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Callithrix jacchus]
gi|402890620|ref|XP_003908581.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Papio anubis]
gi|403269674|ref|XP_003926841.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Saimiri boliviensis boliviensis]
gi|426335284|ref|XP_004029158.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Gorilla gorilla gorilla]
gi|119620770|gb|EAX00365.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_c
[Homo sapiens]
gi|383420739|gb|AFH33583.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|384948774|gb|AFI37992.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|387542062|gb|AFJ71658.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|410213318|gb|JAA03878.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251180|gb|JAA13557.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299020|gb|JAA28110.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|380815574|gb|AFE79661.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420741|gb|AFH33584.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948776|gb|AFI37993.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
Length = 235
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSS 94
G R+RVEL+ G RS DR +
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDRPPA 96
>gi|410339107|gb|JAA38500.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|326920602|ref|XP_003206558.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Meleagris
gallopavo]
Length = 233
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 51 EFEEARDAEDAIRGRDGYDFDGHRLRVELAHGGRGRSSSDRHSSHSSGRGRGVSR----- 105
EFE+ RDA+DA+ DG + R+ +E A R+S S R R
Sbjct: 12 EFEDPRDADDAVYELDGKELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRSAPP 71
Query: 106 -RSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIK 164
R+E R++V L S SWQDLKD MR+AG+V F+ R G+V++ +Y D+K+AI+
Sbjct: 72 LRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRP-KLNEGVVEFASYSDLKNAIE 130
Query: 165 KLDDSEF 171
KL E
Sbjct: 131 KLSGKEI 137
>gi|395846036|ref|XP_003795721.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Otolemur garnettii]
gi|351715512|gb|EHB18431.1| Splicing factor, arginine/serine-rich 7 [Heterocephalus glaber]
Length = 238
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|344288799|ref|XP_003416134.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Loxodonta africana]
Length = 238
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|307133722|ref|NP_001182517.1| splicing factor, arginine/serine-rich 7 [Equus caballus]
gi|73980752|ref|XP_532939.2| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Canis lupus familiaris]
gi|301777346|ref|XP_002924090.1| PREDICTED: splicing factor, arginine/serine-rich 7-like
[Ailuropoda melanoleuca]
gi|311252785|ref|XP_003125258.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Sus scrofa]
gi|410955427|ref|XP_003984355.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Felis catus]
gi|426223793|ref|XP_004006058.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Ovis
aries]
gi|440907651|gb|ELR57771.1| Serine/arginine-rich splicing factor 7 [Bos grunniens mutus]
Length = 238
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|126304540|ref|XP_001362853.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Monodelphis domestica]
Length = 233
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRYDR 93
>gi|297265840|ref|XP_002799297.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 2
[Macaca mulatta]
Length = 165
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|344237407|gb|EGV93510.1| Splicing factor, arginine/serine-rich 7 [Cricetulus griseus]
Length = 227
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 2 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 59
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 60 VICGSRVRVELSTGMPRRSRFDR 82
>gi|119389969|pdb|2HVZ|A Chain A, Solution Structure Of The Rrm Domain Of Sr Rich Factor
9g8
Length = 101
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 3 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 60
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSS 94
G R+RVEL+ G RS DR +
Sbjct: 61 VICGSRVRVELSTGMPRRSRFDRPPA 86
>gi|355718930|gb|AES06434.1| splicing factor, arginine/serine-rich 7, 35kDa [Mustela putorius
furo]
Length = 199
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 22 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 79
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 80 VICGSRVRVELSTGMPRRSRFDR 102
>gi|430811456|emb|CCJ31097.1| unnamed protein product [Pneumocystis jirovecii]
Length = 124
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 10/88 (11%)
Query: 1 MSSRASRT-LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAE 59
MS S T +Y+GNLP +I R++E FY YG IA I L G+AFVEF++ARDA+
Sbjct: 1 MSRPVSETRVYLGNLPRNIERRDIEKFFYGYGEIAEIKLM-----SGFAFVEFKDARDAK 55
Query: 60 DAIRGR----DGYDFDGHRLRVELAHGG 83
DA++G DG G R+ +E A GG
Sbjct: 56 DAVQGSEVSIDGKKMLGDRINIEFARGG 83
>gi|395846038|ref|XP_003795722.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Otolemur garnettii]
Length = 226
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|348574612|ref|XP_003473084.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Cavia porcellus]
Length = 235
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|344288801|ref|XP_003416135.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Loxodonta africana]
Length = 226
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|149050604|gb|EDM02777.1| rCG61762, isoform CRA_f [Rattus norvegicus]
Length = 207
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|431912751|gb|ELK14769.1| Splicing factor, arginine/serine-rich 7 [Pteropus alecto]
Length = 235
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|77735509|ref|NP_001029449.1| serine/arginine-rich splicing factor 7 [Bos taurus]
gi|122146164|sp|Q3T106.1|SRSF7_BOVIN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|74354545|gb|AAI02185.1| Splicing factor, arginine/serine-rich 7, 35kDa [Bos taurus]
gi|296482569|tpg|DAA24684.1| TPA: splicing factor, arginine/serine-rich 7 [Bos taurus]
Length = 235
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|225717656|gb|ACO14674.1| RNA-binding protein 1 [Caligus clemensi]
Length = 139
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + + E+ED+F +YG + + + PPG+AFVEFE+ RDAEDA +G DG
Sbjct: 14 VYVGNLGDNASKHEIEDVFRRYGKVRSV--WVARNPPGFAFVEFEDERDAEDAAKGLDGS 71
Query: 69 DFDGHRLRVELAHGGRGRSSSDRHSSHSSG 98
G R VE++ + D H SG
Sbjct: 72 RICGVRAAVEMSSRKKKNRGGDFRRRHESG 101
>gi|218189952|gb|EEC72379.1| hypothetical protein OsI_05650 [Oryza sativa Indica Group]
Length = 603
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 110/242 (45%), Gaps = 33/242 (13%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG + +D+K G+AFV E+ RDA++AI D
Sbjct: 326 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMK-----SGFAFVYMEDERDADEAIHRLD 380
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
+F G RLRVE R GR + + S ++ +R ++ ++ P +
Sbjct: 381 RIEFGRKGRRLRVEWTKEDRSGGRRGNSKRSPNN-------TRPTKTLFVINFDPINTRT 433
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G + ++ R+ V Y +D A++ + S + +
Sbjct: 434 RDLERHFDQYGKISNVRIRRN----FAFVQYELQEDATKALEGTNGSTLMDRVISVEYAL 489
Query: 183 REYDHRRDGSQSPSRGRSYSRGRSESRSRSRSRGRSYSRSRSQSKSPKAKSSRRSPDRSR 242
R+ D +R+G RGR S R + R RS S Y R R R SPD R
Sbjct: 490 RDDDEKRNGYSPERRGRDRSPDRRDYRGRSAS---PYGRGR----------ERGSPDYGR 536
Query: 243 SR 244
R
Sbjct: 537 GR 538
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFGYYGPLRTV--WIARNPPGFAFVEFEDTRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHG 82
G R+RVEL+ G
Sbjct: 71 LISGSRVRVELSTG 84
>gi|148706562|gb|EDL38509.1| mCG17902, isoform CRA_h [Mus musculus]
gi|149050603|gb|EDM02776.1| rCG61762, isoform CRA_e [Rattus norvegicus]
Length = 226
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|194374435|dbj|BAG57113.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|306774103|ref|NP_001182416.1| serine/arginine-rich splicing factor 7 isoform 4 [Mus musculus]
Length = 223
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
>gi|115443899|ref|NP_001045729.1| Os02g0122800 [Oryza sativa Japonica Group]
gi|41053015|dbj|BAD07946.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa
Japonica Group]
gi|113535260|dbj|BAF07643.1| Os02g0122800 [Oryza sativa Japonica Group]
gi|215768223|dbj|BAH00452.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 279
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 7 RTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRD 66
R ++ GNL D R+ E+E LF KYG + +D+K G+AFV E+ RDA++AI D
Sbjct: 2 RPVFCGNLDYDARQSEIERLFSKYGRVERVDMKS-----GFAFVYMEDERDADEAIHRLD 56
Query: 67 GYDF--DGHRLRVELAHGGR--GRSSSDRHSSHSSGRGRGVSRRSEYRVLVTGLPSSASW 122
+F G RLRVE R GR + + S ++ +R ++ ++ P +
Sbjct: 57 RIEFGRKGRRLRVEWTKEDRSGGRRGNSKRSPNN-------TRPTKTLFVINFDPINTRT 109
Query: 123 QDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKHAIKKLDDSEFRNAFSRAYVRV 182
+DL+ H + G + ++ R+ V Y +D A++ + S + +
Sbjct: 110 RDLERHFDQYGKISNVRIRRN----FAFVQYELQEDATKALEGTNGSTLMDRVISVEYAL 165
Query: 183 REYDHRRDGSQSPSRGRSYSRGRSESRSRSRS 214
R+ D +R+G RGR S R + R RS S
Sbjct: 166 RDDDEKRNGYSPERRGRDRSPDRRDYRGRSAS 197
>gi|148706563|gb|EDL38510.1| mCG17902, isoform CRA_i [Mus musculus]
Length = 205
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 9 LYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGY 68
+YVGNL + E+E F YGP+ + I PPG+AFVEFE+ RDAEDA+RG DG
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTV--WIARNPPGFAFVEFEDPRDAEDAVRGLDGK 70
Query: 69 DFDGHRLRVELAHGGRGRSSSDR 91
G R+RVEL+ G RS DR
Sbjct: 71 VICGSRVRVELSTGMPRRSRFDR 93
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,442,248,600
Number of Sequences: 23463169
Number of extensions: 195269098
Number of successful extensions: 1408483
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11508
Number of HSP's successfully gapped in prelim test: 21830
Number of HSP's that attempted gapping in prelim test: 973552
Number of HSP's gapped (non-prelim): 213716
length of query: 277
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 137
effective length of database: 9,074,351,707
effective search space: 1243186183859
effective search space used: 1243186183859
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)