Query 023800
Match_columns 277
No_of_seqs 332 out of 3016
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 13:00:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023800.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023800hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uk7_A Class I glutamine amido 100.0 3.5E-45 1.2E-49 333.1 22.7 242 1-276 26-334 (396)
2 4e08_A DJ-1 beta; flavodoxin-l 100.0 7.1E-29 2.4E-33 203.5 13.2 138 1-139 19-189 (190)
3 4hcj_A THIJ/PFPI domain protei 100.0 3.2E-28 1.1E-32 196.9 13.3 121 1-124 22-175 (177)
4 3er6_A Putative transcriptiona 100.0 2.9E-28 9.8E-33 202.8 11.7 142 1-144 22-205 (209)
5 3mgk_A Intracellular protease/ 100.0 4.2E-28 1.4E-32 202.0 11.6 138 1-141 18-191 (211)
6 3noq_A THIJ/PFPI family protei 100.0 7.7E-28 2.6E-32 203.1 13.1 138 1-141 19-188 (231)
7 3ot1_A 4-methyl-5(B-hydroxyeth 99.9 3.8E-28 1.3E-32 202.0 10.6 139 1-140 23-195 (208)
8 2rk3_A Protein DJ-1; parkinson 99.9 1E-27 3.5E-32 197.8 12.4 141 1-142 17-192 (197)
9 3ewn_A THIJ/PFPI family protei 99.9 1.1E-27 3.7E-32 204.4 12.9 139 1-141 37-208 (253)
10 4gdh_A DJ-1, uncharacterized p 99.9 1.2E-27 3.9E-32 196.9 12.4 136 1-138 18-194 (194)
11 2ab0_A YAJL; DJ-1/THIJ superfa 99.9 3.6E-27 1.2E-31 195.6 12.2 142 1-143 16-193 (205)
12 3gra_A Transcriptional regulat 99.9 1.1E-27 3.7E-32 198.3 8.5 138 1-144 19-197 (202)
13 4hcj_A THIJ/PFPI domain protei 99.9 3.6E-26 1.2E-30 184.8 12.3 113 161-276 9-121 (177)
14 3efe_A THIJ/PFPI family protei 99.9 1.4E-25 4.6E-30 187.1 13.1 138 1-144 19-201 (212)
15 4e08_A DJ-1 beta; flavodoxin-l 99.9 3.6E-25 1.2E-29 181.4 15.1 117 158-276 3-120 (190)
16 3bhn_A THIJ/PFPI domain protei 99.9 1.4E-25 4.8E-30 189.4 10.5 137 1-142 34-204 (236)
17 3l18_A Intracellular protease 99.9 9E-25 3.1E-29 175.5 14.4 114 160-276 2-115 (168)
18 3f5d_A Protein YDEA; unknow pr 99.9 3.8E-25 1.3E-29 183.3 12.5 133 1-141 17-185 (206)
19 3ot1_A 4-methyl-5(B-hydroxyeth 99.9 8.9E-25 3E-29 181.6 14.4 116 159-276 8-125 (208)
20 2rk3_A Protein DJ-1; parkinson 99.9 2.1E-24 7E-29 177.9 14.4 117 159-276 2-119 (197)
21 3l18_A Intracellular protease 99.9 1.1E-24 3.7E-29 175.1 10.5 120 1-123 16-168 (168)
22 2ab0_A YAJL; DJ-1/THIJ superfa 99.9 4.9E-24 1.7E-28 176.7 14.6 116 160-276 2-120 (205)
23 1oi4_A Hypothetical protein YH 99.9 6.4E-24 2.2E-28 174.4 15.2 116 158-276 21-138 (193)
24 2fex_A Conserved hypothetical 99.9 4.4E-24 1.5E-28 174.6 13.1 134 1-141 15-186 (188)
25 2vrn_A Protease I, DR1199; cys 99.9 6.1E-24 2.1E-28 174.0 13.7 116 159-276 8-128 (190)
26 2vrn_A Protease I, DR1199; cys 99.9 1.1E-24 3.8E-29 178.4 9.3 126 2-129 24-188 (190)
27 3fse_A Two-domain protein cont 99.9 1.7E-24 5.9E-29 192.7 9.6 134 1-136 24-191 (365)
28 3ewn_A THIJ/PFPI family protei 99.9 1.9E-23 6.5E-28 178.1 13.1 115 159-276 22-137 (253)
29 3efe_A THIJ/PFPI family protei 99.9 1.5E-23 5E-28 174.7 11.7 113 160-276 5-125 (212)
30 3gra_A Transcriptional regulat 99.9 6.3E-24 2.2E-28 175.6 9.0 112 159-276 4-121 (202)
31 3noq_A THIJ/PFPI family protei 99.9 2.3E-23 7.7E-28 175.7 12.5 113 159-276 4-117 (231)
32 3er6_A Putative transcriptiona 99.9 2.2E-23 7.6E-28 173.2 11.9 114 159-276 7-128 (209)
33 2fex_A Conserved hypothetical 99.9 2.9E-23 1E-27 169.7 11.4 113 160-276 1-114 (188)
34 3fse_A Two-domain protein cont 99.9 8.3E-23 2.8E-27 181.9 13.7 115 159-276 9-125 (365)
35 3mgk_A Intracellular protease/ 99.9 5.1E-23 1.7E-27 171.3 11.5 113 159-276 3-117 (211)
36 1oi4_A Hypothetical protein YH 99.9 8.2E-23 2.8E-27 167.8 11.8 119 2-123 38-192 (193)
37 3f5d_A Protein YDEA; unknow pr 99.9 1.4E-22 4.9E-27 167.8 10.4 110 160-276 3-113 (206)
38 3cne_A Putative protease I; st 99.9 2.7E-22 9.4E-27 162.0 11.5 118 4-122 19-174 (175)
39 3kkl_A Probable chaperone prot 99.9 7.4E-23 2.5E-27 173.6 7.5 125 1-126 29-239 (244)
40 4gdh_A DJ-1, uncharacterized p 99.9 5.5E-22 1.9E-26 162.9 12.3 116 159-276 3-126 (194)
41 1u9c_A APC35852; structural ge 99.9 6.1E-22 2.1E-26 166.2 11.1 116 159-276 4-148 (224)
42 3l3b_A ES1 family protein; ssg 99.9 2.8E-22 9.6E-27 169.7 9.0 117 159-276 22-172 (242)
43 1u9c_A APC35852; structural ge 99.9 4.7E-22 1.6E-26 166.9 7.9 123 2-126 30-224 (224)
44 3cne_A Putative protease I; st 99.9 2.6E-21 8.7E-26 156.3 11.7 110 160-276 2-124 (175)
45 3ttv_A Catalase HPII; heme ori 99.8 1E-20 3.6E-25 179.1 15.0 112 159-274 599-710 (753)
46 3n7t_A Macrophage binding prot 99.8 9.2E-22 3.2E-26 167.0 6.2 124 1-125 35-244 (247)
47 3bhn_A THIJ/PFPI domain protei 99.8 3.9E-21 1.3E-25 162.2 9.9 111 159-276 19-132 (236)
48 3kkl_A Probable chaperone prot 99.8 6.8E-21 2.3E-25 161.5 10.7 116 160-276 3-158 (244)
49 1rw7_A YDR533CP; alpha-beta sa 99.8 6.2E-21 2.1E-25 162.1 9.9 115 160-276 3-158 (243)
50 3uk7_A Class I glutamine amido 99.8 2E-20 6.9E-25 169.8 13.3 116 159-276 11-141 (396)
51 1vhq_A Enhancing lycopene bios 99.8 8.6E-21 2.9E-25 160.1 9.4 113 159-272 5-149 (232)
52 1rw7_A YDR533CP; alpha-beta sa 99.8 2.1E-21 7.2E-26 164.9 5.1 122 2-124 30-237 (243)
53 3n7t_A Macrophage binding prot 99.8 3.2E-20 1.1E-24 157.5 10.5 116 160-276 9-164 (247)
54 1sy7_A Catalase 1; heme oxidat 99.8 1.3E-19 4.4E-24 173.1 15.8 115 160-276 534-649 (715)
55 1n57_A Chaperone HSP31, protei 99.8 1.1E-20 3.9E-25 164.3 4.9 124 1-126 76-281 (291)
56 1n57_A Chaperone HSP31, protei 99.8 9.8E-20 3.4E-24 158.4 10.5 115 160-276 48-202 (291)
57 1vhq_A Enhancing lycopene bios 99.8 4.3E-20 1.5E-24 155.8 4.2 135 1-144 25-227 (232)
58 3l3b_A ES1 family protein; ssg 99.7 3.8E-19 1.3E-23 150.4 3.6 121 1-126 42-229 (242)
59 3ej6_A Catalase-3; heme, hydro 99.7 1.6E-16 5.6E-21 149.7 14.2 139 124-274 494-648 (688)
60 2iuf_A Catalase; oxidoreductas 99.7 5.1E-16 1.7E-20 146.8 11.9 142 123-276 485-652 (688)
61 1sy7_A Catalase 1; heme oxidat 99.6 5.6E-16 1.9E-20 148.1 10.8 121 2-124 549-698 (715)
62 3ttv_A Catalase HPII; heme ori 99.4 3.8E-13 1.3E-17 127.7 11.4 116 1-123 614-737 (753)
63 2iuf_A Catalase; oxidoreductas 99.2 3.8E-11 1.3E-15 113.7 10.6 108 1-123 545-676 (688)
64 3d54_D Phosphoribosylformylgly 99.2 1.7E-11 5.8E-16 101.4 6.8 93 159-276 1-99 (213)
65 3ej6_A Catalase-3; heme, hydro 99.0 1.9E-09 6.4E-14 101.9 11.9 104 2-122 553-671 (688)
66 2nv0_A Glutamine amidotransfer 98.5 5.4E-07 1.8E-11 73.2 8.6 86 161-272 2-88 (196)
67 1q7r_A Predicted amidotransfer 98.4 5.1E-07 1.7E-11 74.8 7.4 87 160-272 23-110 (219)
68 2iss_D Glutamine amidotransfer 98.4 7E-07 2.4E-11 73.3 7.2 88 159-272 19-107 (208)
69 1ka9_H Imidazole glycerol phos 98.4 1.6E-06 5.5E-11 70.7 9.1 88 160-272 2-91 (200)
70 3l7n_A Putative uncharacterize 98.3 2.4E-06 8E-11 71.6 9.3 94 161-272 1-100 (236)
71 2ywd_A Glutamine amidotransfer 98.3 1E-06 3.4E-11 71.2 6.7 87 160-272 2-90 (191)
72 3m3p_A Glutamine amido transfe 98.3 2.2E-06 7.4E-11 72.4 8.4 95 160-272 3-98 (250)
73 1wl8_A GMP synthase [glutamine 98.0 1.4E-05 4.9E-10 64.3 8.1 85 163-271 3-87 (189)
74 3ugj_A Phosphoribosylformylgly 98.0 1.7E-05 5.7E-10 80.8 9.4 99 159-276 1046-1157(1303)
75 3d54_D Phosphoribosylformylgly 98.0 4.9E-06 1.7E-10 68.3 4.6 76 5-97 18-101 (213)
76 2abw_A PDX2 protein, glutamina 98.0 9.4E-06 3.2E-10 67.4 6.2 86 161-272 4-96 (227)
77 1qdl_B Protein (anthranilate s 97.9 2.7E-05 9.2E-10 63.1 7.8 90 163-272 4-93 (195)
78 1gpw_B Amidotransferase HISH; 97.9 4.3E-05 1.5E-09 62.1 8.0 86 161-272 1-93 (201)
79 2ywj_A Glutamine amidotransfer 97.8 4.8E-05 1.6E-09 61.0 7.4 83 161-272 1-84 (186)
80 4gud_A Imidazole glycerol phos 97.7 2.2E-05 7.5E-10 64.3 3.9 88 159-272 1-88 (211)
81 1o1y_A Conserved hypothetical 97.7 6.1E-05 2.1E-09 63.1 6.2 93 161-271 13-108 (239)
82 1a9x_B Carbamoyl phosphate syn 97.5 0.00029 9.8E-09 62.8 8.9 183 56-272 90-277 (379)
83 2a9v_A GMP synthase; structura 97.3 0.00055 1.9E-08 56.1 7.3 88 159-271 12-100 (212)
84 2vpi_A GMP synthase; guanine m 97.2 0.00033 1.1E-08 57.7 4.7 87 160-271 24-111 (218)
85 3fij_A LIN1909 protein; 11172J 97.1 0.0012 4E-08 55.7 7.9 79 178-272 32-124 (254)
86 2vdj_A Homoserine O-succinyltr 97.0 0.0014 4.7E-08 56.6 7.3 109 159-269 34-148 (301)
87 3l4e_A Uncharacterized peptida 97.0 0.0013 4.5E-08 53.6 6.5 99 160-272 27-129 (206)
88 1jvn_A Glutamine, bifunctional 96.9 0.0017 5.7E-08 60.9 7.3 90 160-272 4-95 (555)
89 2h2w_A Homoserine O-succinyltr 96.9 0.0039 1.3E-07 53.9 8.7 109 159-269 46-160 (312)
90 1fy2_A Aspartyl dipeptidase; s 96.8 0.0018 6.1E-08 53.7 6.2 95 160-273 31-130 (229)
91 1l9x_A Gamma-glutamyl hydrolas 96.8 0.0014 4.9E-08 57.0 5.8 97 160-271 30-139 (315)
92 2w7t_A CTP synthetase, putativ 96.7 0.0029 9.9E-08 53.8 6.9 96 161-271 9-111 (273)
93 2v4u_A CTP synthase 2; pyrimid 96.6 0.0018 6.3E-08 55.6 4.5 101 161-271 26-134 (289)
94 3uow_A GMP synthetase; structu 96.5 0.01 3.6E-07 55.5 9.3 91 161-272 8-99 (556)
95 2nv0_A Glutamine amidotransfer 96.3 0.0024 8.3E-08 51.3 3.2 70 5-91 15-88 (196)
96 3r75_A Anthranilate/para-amino 96.2 0.015 5.1E-07 55.4 8.6 89 160-271 446-536 (645)
97 1q7r_A Predicted amidotransfer 96.0 0.003 1E-07 51.8 2.7 69 6-91 38-110 (219)
98 3tqi_A GMP synthase [glutamine 95.7 0.011 3.9E-07 54.9 5.5 88 161-272 11-98 (527)
99 2iss_D Glutamine amidotransfer 95.6 0.0062 2.1E-07 49.5 2.9 69 6-91 35-107 (208)
100 1i1q_B Anthranilate synthase c 95.5 0.046 1.6E-06 43.6 7.9 90 162-272 2-92 (192)
101 2ywd_A Glutamine amidotransfer 95.1 0.011 3.9E-07 47.0 3.0 70 5-91 16-90 (191)
102 3nva_A CTP synthase; rossman f 95.1 0.019 6.6E-07 52.8 4.6 151 99-271 234-394 (535)
103 1gpm_A GMP synthetase, XMP ami 95.1 0.027 9.3E-07 52.4 5.8 87 161-271 8-94 (525)
104 3l7n_A Putative uncharacterize 95.0 0.094 3.2E-06 43.3 8.4 74 7-91 18-100 (236)
105 1ka9_H Imidazole glycerol phos 94.9 0.021 7.1E-07 45.9 4.0 68 6-91 18-91 (200)
106 3m3p_A Glutamine amido transfe 94.8 0.061 2.1E-06 45.0 6.6 74 7-91 21-98 (250)
107 3ugj_A Phosphoribosylformylgly 94.5 0.081 2.8E-06 54.1 7.9 39 58-97 1119-1159(1303)
108 1s1m_A CTP synthase; CTP synth 94.3 0.041 1.4E-06 51.2 4.9 46 221-271 342-387 (545)
109 1vco_A CTP synthetase; tetrame 94.1 0.041 1.4E-06 51.2 4.4 47 221-272 354-400 (550)
110 1wl8_A GMP synthase [glutamine 93.9 0.08 2.7E-06 42.0 5.3 69 5-91 15-88 (189)
111 1qdl_B Protein (anthranilate s 93.5 0.11 3.7E-06 41.5 5.5 73 5-91 16-93 (195)
112 2vxo_A GMP synthase [glutamine 93.4 0.053 1.8E-06 52.1 4.0 89 160-272 29-117 (697)
113 3en0_A Cyanophycinase; serine 93.2 0.19 6.4E-06 43.0 6.8 99 161-271 57-160 (291)
114 2ywb_A GMP synthase [glutamine 92.7 0.15 5E-06 47.1 5.8 75 177-272 13-87 (503)
115 2abw_A PDX2 protein, glutamina 92.6 0.056 1.9E-06 44.3 2.5 30 61-91 66-96 (227)
116 1o1y_A Conserved hypothetical 92.6 0.18 6.2E-06 41.7 5.7 29 62-91 81-109 (239)
117 1gpw_B Amidotransferase HISH; 90.1 0.23 7.7E-06 39.7 3.7 29 63-92 66-94 (201)
118 2ywj_A Glutamine amidotransfer 89.7 0.29 9.9E-06 38.5 4.0 66 5-91 14-84 (186)
119 3fij_A LIN1909 protein; 11172J 88.8 0.89 3E-05 37.8 6.5 30 61-91 95-124 (254)
120 3l4e_A Uncharacterized peptida 88.1 0.28 9.5E-06 39.6 2.8 32 59-91 98-129 (206)
121 4gud_A Imidazole glycerol phos 87.5 0.13 4.4E-06 41.4 0.5 73 5-92 17-89 (211)
122 3rht_A (gatase1)-like protein; 86.8 3.5 0.00012 34.4 8.9 83 159-262 3-86 (259)
123 2v4u_A CTP synthase 2; pyrimid 85.1 0.83 2.9E-05 38.8 4.3 29 61-90 106-134 (289)
124 2a9v_A GMP synthase; structura 82.5 1.5 5E-05 35.3 4.6 21 70-91 81-101 (212)
125 3r75_A Anthranilate/para-amino 82.4 2.8 9.6E-05 39.8 7.1 29 62-91 509-537 (645)
126 1a9x_B Carbamoyl phosphate syn 77.2 2.1 7.3E-05 37.8 4.2 31 60-91 247-277 (379)
127 1jvn_A Glutamine, bifunctional 76.0 1.3 4.5E-05 41.3 2.6 29 62-91 67-95 (555)
128 2ark_A Flavodoxin; FMN, struct 75.8 6.5 0.00022 30.5 6.4 84 160-263 4-96 (188)
129 2w7t_A CTP synthetase, putativ 73.6 2.4 8.4E-05 35.5 3.5 29 61-90 83-111 (273)
130 2r47_A Uncharacterized protein 72.1 13 0.00046 28.2 6.8 106 160-275 26-135 (157)
131 1fy2_A Aspartyl dipeptidase; s 69.7 2.2 7.4E-05 34.8 2.2 34 59-93 98-131 (229)
132 4e5v_A Putative THUA-like prot 69.3 41 0.0014 28.1 10.2 92 159-266 3-97 (281)
133 2a5l_A Trp repressor binding p 68.3 15 0.0005 28.5 6.9 100 160-265 5-118 (200)
134 2zuv_A Lacto-N-biose phosphory 67.7 23 0.00079 33.6 8.7 89 159-263 437-544 (759)
135 1i1q_B Anthranilate synthase c 66.6 4.5 0.00015 31.7 3.5 28 63-92 66-93 (192)
136 2b99_A Riboflavin synthase; lu 66.3 6.5 0.00022 30.0 4.1 93 160-261 2-98 (156)
137 3hly_A Flavodoxin-like domain; 65.9 14 0.00048 27.8 6.1 91 161-266 1-93 (161)
138 3ff4_A Uncharacterized protein 64.6 33 0.0011 24.7 7.6 63 159-229 3-65 (122)
139 3fni_A Putative diflavin flavo 62.9 25 0.00086 26.4 7.0 92 161-266 5-98 (159)
140 1jg7_A BGT, DNA beta-glucosylt 62.0 15 0.00053 29.7 5.7 58 161-229 1-65 (351)
141 3nq4_A 6,7-dimethyl-8-ribityll 61.7 18 0.00062 27.5 5.8 92 159-259 11-113 (156)
142 1ydg_A Trp repressor binding p 61.4 18 0.00063 28.3 6.3 102 159-265 5-125 (211)
143 1l9x_A Gamma-glutamyl hydrolas 60.0 8.1 0.00028 33.0 4.1 30 61-91 109-140 (315)
144 1u0t_A Inorganic polyphosphate 58.6 34 0.0012 28.9 7.8 97 159-266 3-110 (307)
145 3uow_A GMP synthetase; structu 57.8 11 0.00037 35.0 4.8 26 65-91 74-99 (556)
146 3d3j_A Enhancer of mRNA-decapp 55.9 93 0.0032 26.3 11.6 97 161-262 133-241 (306)
147 1rvv_A Riboflavin synthase; tr 55.5 21 0.00071 27.1 5.2 94 159-261 11-114 (154)
148 1hqk_A 6,7-dimethyl-8-ribityll 55.3 21 0.00073 27.1 5.2 94 159-261 11-114 (154)
149 1t0b_A THUA-like protein; treh 54.6 38 0.0013 27.8 7.2 71 179-265 37-107 (252)
150 2qv7_A Diacylglycerol kinase D 52.7 23 0.0008 30.2 5.8 64 160-233 24-91 (337)
151 1z0s_A Probable inorganic poly 52.6 20 0.00068 30.1 5.2 72 161-265 30-101 (278)
152 2q9u_A A-type flavoprotein; fl 52.2 34 0.0012 29.9 7.0 91 160-266 256-352 (414)
153 2c92_A 6,7-dimethyl-8-ribityll 51.4 25 0.00086 26.8 5.1 92 159-261 16-115 (160)
154 2i0f_A 6,7-dimethyl-8-ribityll 50.7 31 0.0011 26.3 5.5 94 161-260 13-115 (157)
155 3f6r_A Flavodoxin; FMN binding 50.7 17 0.00057 26.7 4.1 87 161-264 2-94 (148)
156 3tty_A Beta-GAL, beta-galactos 49.6 47 0.0016 31.5 7.9 64 175-265 426-490 (675)
157 1c2y_A Protein (lumazine synth 48.7 20 0.00069 27.3 4.2 93 159-260 12-113 (156)
158 1s1m_A CTP synthase; CTP synth 48.0 17 0.00059 33.6 4.4 29 61-90 359-387 (545)
159 1y80_A Predicted cobalamin bin 47.9 69 0.0023 25.1 7.6 60 161-232 89-149 (210)
160 2i2x_B MTAC, methyltransferase 47.3 53 0.0018 26.9 7.0 60 160-231 123-183 (258)
161 3d3k_A Enhancer of mRNA-decapp 47.1 1.2E+02 0.004 24.9 11.1 97 161-262 86-194 (259)
162 2an1_A Putative kinase; struct 46.6 22 0.00074 29.7 4.5 91 160-265 5-97 (292)
163 3b6i_A Flavoprotein WRBA; flav 45.8 71 0.0024 24.3 7.3 101 161-266 2-116 (198)
164 1kz1_A 6,7-dimethyl-8-ribityll 44.1 37 0.0013 25.8 5.0 92 160-260 17-119 (159)
165 3tqi_A GMP synthase [glutamine 43.8 15 0.0005 33.9 3.2 26 65-91 73-98 (527)
166 3kjx_A Transcriptional regulat 42.8 1.4E+02 0.0048 24.8 9.3 63 127-198 44-109 (344)
167 3g1w_A Sugar ABC transporter; 42.5 80 0.0027 25.6 7.5 89 159-263 3-94 (305)
168 3ezx_A MMCP 1, monomethylamine 41.7 31 0.0011 27.5 4.6 76 161-250 93-171 (215)
169 2vpi_A GMP synthase; guanine m 41.4 10 0.00035 30.4 1.6 22 69-91 91-112 (218)
170 3s40_A Diacylglycerol kinase; 41.3 53 0.0018 27.5 6.2 38 159-196 7-48 (304)
171 3m9w_A D-xylose-binding peripl 41.2 1E+02 0.0035 25.1 8.1 39 160-198 2-43 (313)
172 1vco_A CTP synthetase; tetrame 41.2 25 0.00087 32.5 4.4 30 61-91 371-400 (550)
173 2gk3_A Putative cytoplasmic pr 40.6 51 0.0017 26.9 5.8 74 175-261 41-124 (256)
174 2vdj_A Homoserine O-succinyltr 40.2 17 0.00058 30.9 2.8 31 61-92 122-153 (301)
175 2h2w_A Homoserine O-succinyltr 39.9 17 0.00059 31.0 2.8 32 61-92 134-165 (312)
176 2obx_A DMRL synthase 1, 6,7-di 39.7 24 0.00082 26.9 3.3 94 159-261 10-113 (157)
177 2i2c_A Probable inorganic poly 39.5 55 0.0019 27.0 5.9 35 222-265 35-71 (272)
178 1f4p_A Flavodoxin; electron tr 39.5 29 0.001 25.2 3.9 87 161-264 1-93 (147)
179 2ohh_A Type A flavoprotein FPR 39.4 70 0.0024 27.6 6.9 92 159-266 255-354 (404)
180 2bon_A Lipid kinase; DAG kinas 39.1 48 0.0017 28.2 5.7 87 160-265 29-120 (332)
181 3l6u_A ABC-type sugar transpor 39.0 95 0.0033 24.9 7.4 88 159-263 7-97 (293)
182 3kbq_A Protein TA0487; structu 38.4 83 0.0028 24.1 6.4 86 159-253 2-107 (172)
183 3eag_A UDP-N-acetylmuramate:L- 38.1 1.8E+02 0.0061 24.4 10.2 71 159-232 3-76 (326)
184 3nva_A CTP synthase; rossman f 38.1 23 0.00078 32.6 3.5 31 60-91 365-395 (535)
185 2fn9_A Ribose ABC transporter, 38.1 56 0.0019 26.4 5.8 87 160-263 2-91 (290)
186 1di0_A Lumazine synthase; tran 37.6 26 0.0009 26.7 3.3 93 160-261 10-112 (158)
187 3l49_A ABC sugar (ribose) tran 37.2 1.2E+02 0.0041 24.3 7.8 40 159-198 4-46 (291)
188 3hn2_A 2-dehydropantoate 2-red 36.5 63 0.0022 27.0 6.0 93 160-265 2-106 (312)
189 3dbi_A Sugar-binding transcrip 36.5 1.1E+02 0.0036 25.5 7.4 40 159-198 60-104 (338)
190 3uug_A Multiple sugar-binding 36.4 77 0.0026 26.1 6.5 87 160-263 3-92 (330)
191 3i83_A 2-dehydropantoate 2-red 35.6 55 0.0019 27.5 5.5 94 160-265 2-108 (320)
192 2hna_A Protein MIOC, flavodoxi 35.5 1.2E+02 0.0042 21.8 7.7 86 161-265 2-92 (147)
193 1ejb_A Lumazine synthase; anal 34.7 40 0.0014 26.0 3.9 94 160-259 16-121 (168)
194 2vzf_A NADH-dependent FMN redu 34.1 3.9 0.00013 32.1 -2.0 101 160-266 2-113 (197)
195 1ccw_A Protein (glutamate muta 34.0 51 0.0017 24.0 4.4 77 161-251 4-81 (137)
196 2zki_A 199AA long hypothetical 31.9 91 0.0031 23.7 5.8 100 160-265 4-117 (199)
197 2yxb_A Coenzyme B12-dependent 31.7 42 0.0015 25.3 3.7 77 160-250 18-95 (161)
198 1sqs_A Conserved hypothetical 30.4 32 0.0011 27.6 3.0 101 161-265 2-126 (242)
199 3rss_A Putative uncharacterize 30.2 1.4E+02 0.0046 27.2 7.4 97 161-265 53-162 (502)
200 3s5j_B Ribose-phosphate pyroph 30.0 1.3E+02 0.0043 25.8 6.7 144 126-271 14-179 (326)
201 3qk7_A Transcriptional regulat 29.6 1.6E+02 0.0055 23.7 7.3 38 159-196 5-49 (294)
202 1y81_A Conserved hypothetical 29.6 1.6E+02 0.0055 21.3 10.5 66 157-230 11-77 (138)
203 2fz5_A Flavodoxin; alpha/beta 29.5 1.4E+02 0.0049 20.7 7.3 67 178-264 19-89 (137)
204 3tb6_A Arabinose metabolism tr 29.3 1.6E+02 0.0053 23.6 7.2 38 161-198 16-56 (298)
205 3gbv_A Putative LACI-family tr 29.1 83 0.0028 25.4 5.4 91 159-263 7-102 (304)
206 1ffv_A CUTS, iron-sulfur prote 28.8 9.3 0.00032 29.4 -0.6 63 60-123 83-156 (163)
207 2xgg_A Microneme protein 2; A/ 27.5 91 0.0031 23.3 5.0 38 160-197 122-161 (178)
208 1t5b_A Acyl carrier protein ph 27.0 47 0.0016 25.4 3.3 98 161-264 2-141 (201)
209 3en0_A Cyanophycinase; serine 26.9 36 0.0012 28.7 2.7 33 58-91 128-161 (291)
210 1rm6_C 4-hydroxybenzoyl-COA re 25.9 8.1 0.00028 29.6 -1.4 57 65-122 87-154 (161)
211 3huu_A Transcription regulator 25.8 68 0.0023 26.2 4.3 39 159-197 21-67 (305)
212 3jy6_A Transcriptional regulat 24.8 1.7E+02 0.0058 23.2 6.5 40 159-198 6-48 (276)
213 1kwg_A Beta-galactosidase; TIM 24.8 1.1E+02 0.0038 28.6 6.0 62 175-265 426-487 (645)
214 4amg_A Snogd; transferase, pol 24.7 83 0.0028 26.7 4.8 39 159-197 21-60 (400)
215 3o74_A Fructose transport syst 23.8 1.1E+02 0.0036 24.2 5.1 39 160-198 2-43 (272)
216 3fro_A GLGA glycogen synthase; 23.5 1.5E+02 0.005 25.2 6.2 39 160-198 2-46 (439)
217 2gek_A Phosphatidylinositol ma 23.4 1.1E+02 0.0036 25.9 5.2 40 159-198 19-63 (406)
218 1ykg_A SIR-FP, sulfite reducta 23.2 76 0.0026 23.7 3.7 86 160-264 9-102 (167)
219 3hrd_D Nicotinate dehydrogenas 22.3 17 0.00058 27.8 -0.2 61 60-121 83-154 (160)
220 2phj_A 5'-nucleotidase SURE; S 22.2 1.1E+02 0.0037 25.2 4.6 37 161-198 2-38 (251)
221 4fe7_A Xylose operon regulator 22.1 1.5E+02 0.0051 25.5 6.0 80 158-263 23-105 (412)
222 3k9c_A Transcriptional regulat 21.8 2.5E+02 0.0085 22.4 7.0 39 159-198 11-52 (289)
223 3u7r_A NADPH-dependent FMN red 21.7 39 0.0013 26.4 1.8 103 159-263 1-112 (190)
224 3e3m_A Transcriptional regulat 21.6 1.7E+02 0.0059 24.4 6.2 39 159-197 69-110 (355)
225 2fzv_A Putative arsenical resi 21.5 1.3E+02 0.0044 25.0 5.1 99 159-264 57-170 (279)
226 5nul_A Flavodoxin; electron tr 21.5 1.1E+02 0.0036 21.8 4.1 70 177-266 17-90 (138)
227 1e5d_A Rubredoxin\:oxygen oxid 20.8 3.9E+02 0.013 22.6 9.1 90 160-265 252-346 (402)
228 3ty2_A 5'-nucleotidase SURE; s 20.8 1.3E+02 0.0045 24.8 4.9 39 159-198 10-48 (261)
229 3qbe_A 3-dehydroquinate syntha 20.6 1.1E+02 0.0038 26.5 4.7 95 161-264 44-138 (368)
230 3g17_A Similar to 2-dehydropan 20.6 69 0.0024 26.5 3.3 94 160-266 2-100 (294)
231 1qpz_A PURA, protein (purine n 20.1 2.3E+02 0.0079 23.4 6.6 39 159-197 57-98 (340)
No 1
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=100.00 E-value=3.5e-45 Score=333.07 Aligned_cols=242 Identities=22% Similarity=0.295 Sum_probs=216.5
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCc---------------eeecCCCCEEecCcccccccc---C-----CCccchhcc
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQL---------------RVDACHGVKIVADALVSNCRD---A-----CGMPGATNL 57 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~---------------~v~~~~g~~v~~d~~~~~~~~---~-----gG~~~~~~~ 57 (277)
+|+..|+++|+++||+|+++|++++. .++++.|+.+.+|..+++++. + ||. +...+
T Consensus 26 ~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~~ 104 (396)
T 3uk7_A 26 YEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSKYDGLVIPGGR-APEYL 104 (396)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGGCSEEEECCBS-HHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCcccCCEEEECCCc-chhhc
Confidence 38899999999999999999998521 356778999999999998742 2 774 56667
Q ss_pred ccChHHHHHHHHHHhCCCEEEEEchhHHHHHHHcCCCCCCC-----------------------------CCCeEcCCCC
Q 023800 58 KESEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------------------------DGKVVTTRGP 108 (277)
Q Consensus 58 ~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------------------------dg~~iT~~g~ 108 (277)
..++.+.+||+++++++++|++||+|++ +|+++|||+||+ |||+|||+|+
T Consensus 105 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~-~La~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~ 183 (396)
T 3uk7_A 105 ALTASVVELVKEFSRSGKPIASICHGQL-ILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITPDVCVVDGSLITAATY 183 (396)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEETTTHH-HHHHTTCCTTCEECCCGGGHHHHHHTTCEECCCSSTTCEEEETTEEEESSG
T ss_pred ccCHHHHHHHHHHHHcCCEEEEECchHH-HHHhccccCCCEeecCcchHHHHHHCCCEEECCCCCcceEecCCEEEecCc
Confidence 8899999999999999999999999999 999999999998 8999999999
Q ss_pred CCHHHHHHHHHHHhcChhHHHHHhhcccccccCCCchhhcccCccccccCCCCeEEEEecCCCchhhHHHHHHHHHhCCC
Q 023800 109 GTPMEFVVALVEQLYGKGKADEVSGARVMRANHGDEFTIAEFNPVQWTFDNSPQILVPIANGSEEMEAVIIIDILRRAKA 188 (277)
Q Consensus 109 ~~~~~~a~~li~~l~g~~~a~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kV~ill~~g~~~~e~~~~~~~l~~a~~ 188 (277)
+++++|++++++++.|++. .+++||+|+++|||++.|+..|+++|+++|+
T Consensus 184 ~~~~d~al~li~~l~g~~~------------------------------~~~~ki~ill~dg~~~~e~~~~~~~l~~ag~ 233 (396)
T 3uk7_A 184 EGHPEFIQLFVKALGGKIT------------------------------GANKRILFLCGDYMEDYEVKVPFQSLQALGC 233 (396)
T ss_dssp GGHHHHHHHHHHHTTCEEE------------------------------CCCCEEEEECCTTEEHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHHhccch------------------------------hccceEEEEecCCCcchhHHHHHHHHHHCCC
Confidence 9999999999999999742 1347999999999999999999999999999
Q ss_pred eEEEEeeCCCc---------------eEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHH
Q 023800 189 NVVVASVADKL---------------EILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKE 253 (277)
Q Consensus 189 ~v~~vs~~~~~---------------~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~ 253 (277)
+++++|+++++ .++++.|..+.++..++++++.+||+|+||||. ....+..++++.+||+++++
T Consensus 234 ~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~livpGg~-~~~~~~~~~~~~~~l~~~~~ 312 (396)
T 3uk7_A 234 QVDAVCPEKKAGDRCPTAIHDFEGDQTYSEKPGHTFALTTNFDDLVSSSYDALVIPGGR-APEYLALNEHVLNIVKEFMN 312 (396)
T ss_dssp EEEEECTTCCTTCEECEEEEECCSSSSCEEEECCCEECCSCGGGCCGGGCSEEEECCBS-HHHHHTTCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCcccccccccccccchhhhcCCceeeccCCHHHCCcccCCEEEECCCc-chhhhccCHHHHHHHHHHHH
Confidence 99999999862 145778999999999999877889999999997 45667889999999999999
Q ss_pred cCCcEEEEchhhHHhhhhCCCCC
Q 023800 254 SNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 254 ~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
++++|++||+|++ +||++|||+
T Consensus 313 ~~~~i~aiC~g~~-~La~aGlL~ 334 (396)
T 3uk7_A 313 SEKPVASICHGQQ-ILAAAGVLK 334 (396)
T ss_dssp TTCCEEEEGGGHH-HHHHTTTTT
T ss_pred CCCEEEEEchHHH-HHHHcCCcC
Confidence 9999999999999 999999997
No 2
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=99.96 E-value=7.1e-29 Score=203.54 Aligned_cols=138 Identities=35% Similarity=0.579 Sum_probs=127.5
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCcccccccc---C-----CCccchhccccChHHHHHHHHHHh
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD---A-----CGMPGATNLKESEVLESIVKKQAS 72 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~---~-----gG~~~~~~~~~~~~~~~~l~~~~~ 72 (277)
+|+..|+++|+++||+++++|++++.+|++++|+.+.+|..+++++. + ||.++...++.++.+++||+++++
T Consensus 19 ~e~~~~~~~l~~ag~~v~~~s~~~~~~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~ 98 (190)
T 4e08_A 19 MEFIIAADVLRRAGIKVTVAGLNGGEAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQES 98 (190)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSCEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCcceecCCCcEEECCCCHHHCCcccCCEEEECCCChHHHHhhhCHHHHHHHHHHHH
Confidence 37899999999999999999998645899999999999999998752 2 775456667889999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCeEcCCCCCCHHHHHHHHHHHhcChhH
Q 023800 73 DGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKGK 127 (277)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~a~~li~~l~g~~~ 127 (277)
++++|++||+|++ +|+++|||+||+ |||+|||+|+++++||++++|+++.|++.
T Consensus 99 ~~k~i~aiC~G~~-~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiTs~g~~a~~d~al~li~~~~g~~~ 177 (190)
T 4e08_A 99 GGGLIAAICAAPT-VLAKHGVASGKSLTSYPSMKPQLVNNYSYVDDKTVVKDGNLITSRGPGTAYEFALKIAEELAGKEK 177 (190)
T ss_dssp TTCEEEEETTTHH-HHHHTTCSTTCEECCCGGGGGGSSSSSEECSSCSEEEETTEEEECSGGGHHHHHHHHHHHHHCHHH
T ss_pred CCCEEEEECHHHH-HHHHCCCcCCCeEEeCcCHHHHHhcCCcccCCCcEEEECCEEECCChHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999 999999999998 99999999999999999999999999999
Q ss_pred HHHHhhcccccc
Q 023800 128 ADEVSGARVMRA 139 (277)
Q Consensus 128 a~~v~~~~~~~~ 139 (277)
|+++++.|++++
T Consensus 178 a~~va~~l~~~~ 189 (190)
T 4e08_A 178 VQEVAKGLLVAY 189 (190)
T ss_dssp HHHHHHHHTCCC
T ss_pred HHHHHHhhCccc
Confidence 999999999986
No 3
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=99.95 E-value=3.2e-28 Score=196.91 Aligned_cols=121 Identities=20% Similarity=0.232 Sum_probs=113.4
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC--------CCccchhccccChHHHHHHHHHHh
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA--------CGMPGATNLKESEVLESIVKKQAS 72 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~--------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (277)
+|+++|+++|+++||+|+++|+++ .++++++|+.+.+|..+++++.. ||+ ++..++.++.+++|++++++
T Consensus 22 ~E~~~p~~~l~~ag~~V~~~s~~~-~~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~-g~~~l~~~~~~~~~l~~~~~ 99 (177)
T 4hcj_A 22 EEYFESKKIFESAGYKTKVSSTFI-GTAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGI-GCITLWDDWRTQGLAKLFLD 99 (177)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSS-EEEEETTSCEEEECEEGGGCCGGGCSEEEECCSG-GGGGGTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCC-CeEeeCCCCEEecCccHHHCCHhHCCEEEECCCc-cHHHHhhCHHHHHHHHHHHH
Confidence 489999999999999999999997 69999999999999999987532 884 67888999999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCeEcCCCCCCHHHHHHHHHHHhcC
Q 023800 73 DGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (277)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~a~~li~~l~g 124 (277)
++|+|+|||+|++ +|+++|||+||+ |||+|||+||+++++|++++++.|.+
T Consensus 100 ~~k~iaaIC~g~~-~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~vV~Dg~liTs~g~~~~~~~a~~lve~L~s 175 (177)
T 4hcj_A 100 NQKIVAGIGSGVV-IMANAKILEEINVTCLSADESHVRHGNANIMSENVVVSGNIVTANGPTSSKDFANAVVGVLNS 175 (177)
T ss_dssp TTCEEEEETTHHH-HHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGGHHHHHHHHHHHHHT
T ss_pred hCCEEEEecccHH-HHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCCEEEECCEEECCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999 999999999998 99999999999999999999999875
No 4
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=99.95 E-value=2.9e-28 Score=202.79 Aligned_cols=142 Identities=16% Similarity=0.149 Sum_probs=122.2
Q ss_pred CchhhHHHHHHhCC-------CeEEEEeeCCCceeecCCCCEEecCccccccccC------CCccc-hhccccChHHHHH
Q 023800 1 MEAVITIDVLRRSG-------ADVVVASVEKQLRVDACHGVKIVADALVSNCRDA------CGMPG-ATNLKESEVLESI 66 (277)
Q Consensus 1 ~E~~~~~~~l~~~~-------~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~------gG~~~-~~~~~~~~~~~~~ 66 (277)
+|+..|+++|++++ |+|.++|.++ .+|++++|+.+.+|..+++++.. ||... ...+++++.+++|
T Consensus 22 ~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~-~~v~~~~G~~v~~d~~~~~~~~~D~livpGg~~~~~~~~~~~~~l~~~ 100 (209)
T 3er6_A 22 ASIISSLEILETAAEFAEFQGFMTHVVTPNN-RPLIGRGGISVQPTAQWQSFDFTNILIIGSIGDPLESLDKIDPALFDW 100 (209)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEEEECTTS-SCEEETTTEEEECSSCGGGCSCCSEEEECCCSCHHHHGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeCCC-CceecCCCeEEeCCcCccccCCCCEEEECCCCCchhhhccCCHHHHHH
Confidence 37889999999874 9999999997 68999999999999999887543 66422 2224679999999
Q ss_pred HHHHHhCCCEEEEEchhHHHHHHHcCCCCCCC----------------------------CCCeEcCCCCCCHHHHHHHH
Q 023800 67 VKKQASDGRLYAAICVFLAVALGSWGLLKGLK----------------------------DGKVVTTRGPGTPMEFVVAL 118 (277)
Q Consensus 67 l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~----------------------------dg~~iT~~g~~~~~~~a~~l 118 (277)
|++++++|++|++||+|++ +||++|||+||+ |||+|||+|+++++||++++
T Consensus 101 l~~~~~~g~~iaaIC~G~~-~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G~~a~~dlal~l 179 (209)
T 3er6_A 101 IRELHLKGSKIVAIDTGIF-VVAKAGLLQQNKAVMHSYFAHLFGELFPEIMLMTEQKALIDGNVYLSSGPYSHSSVMLEI 179 (209)
T ss_dssp HHHHHHTTCEEEEETTHHH-HHHHHTCCSSCEECCCHHHHHHHHHHCTTSEECTTCSEEEETTEEEECCSSCCHHHHHHH
T ss_pred HHHHHhcCCEEEEEcHHHH-HHHHcCCCCCCeeEECHHHHHHHHHHCCCcEEecCCEEEEeCCEEECCcHHHHHHHHHHH
Confidence 9999999999999999999 999999999998 99999999999999999999
Q ss_pred HHHhcChhHHHHHhhcccccccCCCc
Q 023800 119 VEQLYGKGKADEVSGARVMRANHGDE 144 (277)
Q Consensus 119 i~~l~g~~~a~~v~~~~~~~~~~~~~ 144 (277)
|+++.|++.|+++++.|++++.++-+
T Consensus 180 i~~~~G~~~A~~va~~l~~~~~~~~~ 205 (209)
T 3er6_A 180 VEEYFGKHTRNLGNQFLSTIESEGHH 205 (209)
T ss_dssp HHHHHCHHHHHHHHHHTTC-------
T ss_pred HHHHhCHHHHHHHHHHhccCcccccc
Confidence 99999999999999999999877644
No 5
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=99.95 E-value=4.2e-28 Score=202.04 Aligned_cols=138 Identities=17% Similarity=0.292 Sum_probs=127.5
Q ss_pred CchhhHHHHHHhC--CCeEEEEeeCCCceeecCCCCEEecCccccccccC------CCccchhccccChHHHHHHHHHHh
Q 023800 1 MEAVITIDVLRRS--GADVVVASVEKQLRVDACHGVKIVADALVSNCRDA------CGMPGATNLKESEVLESIVKKQAS 72 (277)
Q Consensus 1 ~E~~~~~~~l~~~--~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (277)
+|+..|+++|+++ +|+|.++|+++ .+|++++|+.+.+|..+++.+.. ||. +...+..++++++||+++++
T Consensus 18 ~e~~~~~~~l~~a~~~~~v~~vs~~~-~~V~~~~G~~v~~d~~~~~~~~~D~livpGG~-~~~~~~~~~~~~~~l~~~~~ 95 (211)
T 3mgk_A 18 LDVFGPVEIFGNLQDDFELNFISSDG-GLVESSQKVRVETSLYTRDENIEKILFVPGGS-GTREKVNDDNFINFIGNMVK 95 (211)
T ss_dssp HHHHHHHHHHTTCTTTEEEEEECSSC-EEEECTTCCEEEEBCCCCCSSSEEEEEECCST-HHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCceEEEEEECCC-CeEecCCCcEEEeccchhhCCCCCEEEECCCc-chhhhcCCHHHHHHHHHHHH
Confidence 3788999999998 59999999997 68999999999999999887632 774 66667789999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC----------------------------CCCeEcCCCCCCHHHHHHHHHHHhcC
Q 023800 73 DGRLYAAICVFLAVALGSWGLLKGLK----------------------------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (277)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~----------------------------dg~~iT~~g~~~~~~~a~~li~~l~g 124 (277)
++++|++||+|++ +|+++|||+||+ |||+|||+|+++++||++++|+++.|
T Consensus 96 ~~k~iaaiC~G~~-~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G~~a~~dlal~lv~~~~G 174 (211)
T 3mgk_A 96 ESKYIISVCTGSA-LLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEARWVKDGNIYTSSGVSAGIDMTLGFIEDLIG 174 (211)
T ss_dssp HCSEEEECTTHHH-HHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSCSEEEETTEEEECSHHHHHHHHHHHHHHHHC
T ss_pred cCCEEEEEchHHH-HHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCCeEEEeCCEEECCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999 999999999998 99999999999999999999999999
Q ss_pred hhHHHHHhhcccccccC
Q 023800 125 KGKADEVSGARVMRANH 141 (277)
Q Consensus 125 ~~~a~~v~~~~~~~~~~ 141 (277)
++.|+++++.|++++.+
T Consensus 175 ~~~A~~va~~l~~~~~r 191 (211)
T 3mgk_A 175 KEKALEISRSIEYFWNE 191 (211)
T ss_dssp HHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHhcEECCcC
Confidence 99999999999999765
No 6
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=99.95 E-value=7.7e-28 Score=203.07 Aligned_cols=138 Identities=23% Similarity=0.320 Sum_probs=127.8
Q ss_pred CchhhHHHHHHh-CCCeEEEEeeCCCceeecCCCCEEecCccccccccC------CCccchhccccChHHHHHHHHHHhC
Q 023800 1 MEAVITIDVLRR-SGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA------CGMPGATNLKESEVLESIVKKQASD 73 (277)
Q Consensus 1 ~E~~~~~~~l~~-~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~------gG~~~~~~~~~~~~~~~~l~~~~~~ 73 (277)
+|+..|+++|++ ++|+|+++|+++ .+|++++|+.+.+|..+++++.. || .+...+..++.+++||++++++
T Consensus 19 ~e~~~p~evl~~~~~~~v~~vs~~~-~~V~~~~G~~v~~d~~l~~~~~~D~livpGG-~g~~~~~~~~~l~~~lr~~~~~ 96 (231)
T 3noq_A 19 LDLTGPHDVLASLPDVQVHLIWKEP-GPVVASSGLVLQATTSFADCPPLDVICIPGG-TGVGALMEDPQALAFIRQQAAR 96 (231)
T ss_dssp HHHHHHHHHHTTSTTEEEEEEESSS-EEEECTTSCEEEECEETTTCCCCSEEEECCS-TTHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCEEEEEECCC-CcEEcCCCCEEecccChhHCCcCCEEEECCC-CChhhhccCHHHHHHHHHHHhc
Confidence 378899999999 799999999997 68999999999999999887543 77 4666678899999999999999
Q ss_pred CCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCeEcCCCCCCHHHHHHHHHHHhcChhHH
Q 023800 74 GRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKGKA 128 (277)
Q Consensus 74 g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~a~~li~~l~g~~~a 128 (277)
+++|++||+|++ +|+++|||+||+ |||+|||+|+++++||++++|+++.|++.|
T Consensus 97 g~~v~aiC~G~~-~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~~d~aL~li~~~~G~~~A 175 (231)
T 3noq_A 97 ARYVTSVSTGSL-VLGAAGLLQGKRATTHWAYHELLAPLGAIPVHERVVRDGNLLTGGGITAGIDFALTLAAELFDAATA 175 (231)
T ss_dssp CSEEEEETTHHH-HHHHTTTTTTCEECCCGGGGGGTGGGTCEECCSSEEEETTEEEECSTTHHHHHHHHHHHHHSCHHHH
T ss_pred CCEEEEECHHHH-HHHHcCCCCCceeeecHhHHHHHHhCCCeeeCCcEEEeCCEEECCCHHHHHHHHHHHHHHHcCHHHH
Confidence 999999999999 999999999998 899999999999999999999999999999
Q ss_pred HHHhhcccccccC
Q 023800 129 DEVSGARVMRANH 141 (277)
Q Consensus 129 ~~v~~~~~~~~~~ 141 (277)
+++++.|+|++.+
T Consensus 176 ~~va~~l~~~~~~ 188 (231)
T 3noq_A 176 QRVQLQLEYAPAP 188 (231)
T ss_dssp HHHHHHTTCCCCC
T ss_pred HHHHHhceeCCCC
Confidence 9999999999743
No 7
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=99.95 E-value=3.8e-28 Score=201.98 Aligned_cols=139 Identities=30% Similarity=0.518 Sum_probs=126.3
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCcccccccc---C-----CCccchhccccChHHHHHHHHHHh
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD---A-----CGMPGATNLKESEVLESIVKKQAS 72 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~---~-----gG~~~~~~~~~~~~~~~~l~~~~~ 72 (277)
+|+..|+++|+++||+|+++|+++..+|++++|+.+.+|..+++++. + ||.++.+.+..++.+++||+++++
T Consensus 23 ~e~~~~~~~l~~ag~~v~~vs~~g~~~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~ 102 (208)
T 3ot1_A 23 METVIIVDTLVRAGFQVTMAAVGDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQ 102 (208)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSCSEEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEcCCCcceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHHHHHhhCHHHHHHHHHHHH
Confidence 37899999999999999999998535899999999999999998742 2 775456667899999999999999
Q ss_pred CCCEEEEEchhH-HHHHHHcCCCCCCC-----------------------C--CCeEcCCCCCCHHHHHHHHHHHhcChh
Q 023800 73 DGRLYAAICVFL-AVALGSWGLLKGLK-----------------------D--GKVVTTRGPGTPMEFVVALVEQLYGKG 126 (277)
Q Consensus 73 ~g~~i~aiC~g~-~~~La~aGll~g~~-----------------------d--g~~iT~~g~~~~~~~a~~li~~l~g~~ 126 (277)
++|+|++||+|+ + +|+++|||+||+ | ||+|||+|+++++||++++|+++.|++
T Consensus 103 ~gk~i~aiC~G~a~-~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~vv~d~dg~iiTs~g~~a~~d~al~lv~~l~G~~ 181 (208)
T 3ot1_A 103 QGKLVAAICATPAL-VFAKQQKFVGARMTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGTALEFALAMIALLAGVE 181 (208)
T ss_dssp TTCEEEEETTHHHH-TTTTTTCSTTCCBCCCGGGGGGSCTTTBCCSSEEEEGGGTEEEECSGGGHHHHHHHHHHHHHCHH
T ss_pred cCCEEEEEChhHHH-HHHHCCccCCCEEEECccHHHHccCCccccCcEEEeCCCCEEECCCHHHHHHHHHHHHHHhcCHH
Confidence 999999999999 9 999999999998 4 499999999999999999999999999
Q ss_pred HHHHHhhccccccc
Q 023800 127 KADEVSGARVMRAN 140 (277)
Q Consensus 127 ~a~~v~~~~~~~~~ 140 (277)
.|+++++.|++++.
T Consensus 182 ~a~~va~~l~~~~~ 195 (208)
T 3ot1_A 182 LAQHVAAPMVLHPQ 195 (208)
T ss_dssp HHHHHHGGGTCCHH
T ss_pred HHHHHHHhheeCCC
Confidence 99999999999543
No 8
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=99.95 E-value=1e-27 Score=197.76 Aligned_cols=141 Identities=38% Similarity=0.523 Sum_probs=125.0
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCcccccc---ccC------CCccchhccccChHHHHHHHHHH
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNC---RDA------CGMPGATNLKESEVLESIVKKQA 71 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~---~~~------gG~~~~~~~~~~~~~~~~l~~~~ 71 (277)
+|+..|+++|+++||+++++|++++.+|++++|+.+.+|..++++ ..+ ||..+...++.++.+++||++++
T Consensus 17 ~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~~~l~~~~~~~~~l~~~~ 96 (197)
T 2rk3_A 17 METVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQE 96 (197)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEcCCCCccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhHHHhhhCHHHHHHHHHHH
Confidence 378899999999999999999987558999999999999999887 322 77545666788999999999999
Q ss_pred hCCCEEEEEchhHHHHHHHcCCCCCCC--------------------------CCCeEcCCCCCCHHHHHHHHHHHhcCh
Q 023800 72 SDGRLYAAICVFLAVALGSWGLLKGLK--------------------------DGKVVTTRGPGTPMEFVVALVEQLYGK 125 (277)
Q Consensus 72 ~~g~~i~aiC~g~~~~La~aGll~g~~--------------------------dg~~iT~~g~~~~~~~a~~li~~l~g~ 125 (277)
+++|+|++||+|++ +|+++|+|+||+ |||+|||+|+++++||++++++++.|+
T Consensus 97 ~~gk~i~aiC~G~~-~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~~~v~Dg~iiTs~g~~a~~d~al~li~~l~g~ 175 (197)
T 2rk3_A 97 NRKGLIATICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGK 175 (197)
T ss_dssp HTTCEEEEETTTHH-HHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCCSEEEETTEEEECSGGGHHHHHHHHHHHHHCH
T ss_pred HcCCEEEEECHHHH-HHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCCCEEEeCCEEECCCHHHHHHHHHHHHHHhcCH
Confidence 99999999999999 999999999988 999999999999999999999999999
Q ss_pred hHHHHHhhcccccccCC
Q 023800 126 GKADEVSGARVMRANHG 142 (277)
Q Consensus 126 ~~a~~v~~~~~~~~~~~ 142 (277)
+.|+++++.|+++.-++
T Consensus 176 ~~a~~va~~~~~~~~~~ 192 (197)
T 2rk3_A 176 EVAAQVKAPLVLKDLEH 192 (197)
T ss_dssp HHHHHHHGGGTC-----
T ss_pred HHHHHHHHHHhhhhhhh
Confidence 99999999999986543
No 9
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=99.95 E-value=1.1e-27 Score=204.42 Aligned_cols=139 Identities=20% Similarity=0.276 Sum_probs=127.2
Q ss_pred CchhhHHHHH-HhCCCeEEEEeeCCCceeecCCCCEEecCcccccccc--C-----CCccchhccccChHHHHHHHHHHh
Q 023800 1 MEAVITIDVL-RRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD--A-----CGMPGATNLKESEVLESIVKKQAS 72 (277)
Q Consensus 1 ~E~~~~~~~l-~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~--~-----gG~~~~~~~~~~~~~~~~l~~~~~ 72 (277)
+|+..|+++| ++++|+|+++|+++ .+|++++|+.+.+|..+++++. + ||.++...+..++.+++||+++++
T Consensus 37 ~e~~~p~dvl~~~~~~~v~~vs~~~-~~V~~~~G~~i~~d~~l~~~~~~yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~ 115 (253)
T 3ewn_A 37 MDLVGPHCMFGSLMGAKIYIVAKSL-DPVTSDAGLAIVPTATFGTCPRDLTVLFAPGGTDGTLAAASDAETLAFMADRGA 115 (253)
T ss_dssp HHHHHHHHHHTTSTTCEEEEEESSS-SCEECTTSCEECCSEETTTSCSSCSEEEECCBSHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCEEEEEeCCC-CeEEcCCCCEEeCCcCHHHcCCCCCEEEECCCccchhhhccCHHHHHHHHHHHH
Confidence 3788999999 67899999999997 5899999999999999988753 2 774356677889999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCeEcCCCCCCHHHHHHHHHHHhcChhH
Q 023800 73 DGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKGK 127 (277)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~a~~li~~l~g~~~ 127 (277)
+|++|++||+|++ +|+++|||+||+ |||+|||+|+++++||++++|+++.|++.
T Consensus 116 ~gk~IaaICtG~~-lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~idlaL~lv~~l~G~~~ 194 (253)
T 3ewn_A 116 RAKYITSVCSGSL-ILGAAGLLKGYKATSHWSCRDALAGFGAIPTEARVVRDRNRITGAGVTAGLDFGLSMVAELRDQTY 194 (253)
T ss_dssp TCSEEEEETTHHH-HHHHTTCCTTCEECCCTTTGGGGGGGTCEECCSSEEEETTEEEECSTTHHHHHHHHHHHHHSCHHH
T ss_pred cCCEEEEEChHHH-HHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCCcEEEECCEEECCCHHHHHHHHHHHHHHHcCHHH
Confidence 9999999999999 999999999998 99999999999999999999999999999
Q ss_pred HHHHhhcccccccC
Q 023800 128 ADEVSGARVMRANH 141 (277)
Q Consensus 128 a~~v~~~~~~~~~~ 141 (277)
|+++++.|+|++.+
T Consensus 195 A~~va~~l~~~~~~ 208 (253)
T 3ewn_A 195 AECAQLMSEYDPDP 208 (253)
T ss_dssp HHHHHHHTTCCCCC
T ss_pred HHHHHHhcccCCCC
Confidence 99999999999644
No 10
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=99.95 E-value=1.2e-27 Score=196.86 Aligned_cols=136 Identities=21% Similarity=0.274 Sum_probs=122.9
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCC--CceeecCCCCEEecCcccccccc--------C-----CCccchhccccChHHHH
Q 023800 1 MEAVITIDVLRRSGADVVVASVEK--QLRVDACHGVKIVADALVSNCRD--------A-----CGMPGATNLKESEVLES 65 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~--~~~v~~~~g~~v~~d~~~~~~~~--------~-----gG~~~~~~~~~~~~~~~ 65 (277)
+|+++|+++|+++|++++++|+.. +.++++++|+.+.+|..+++++. + ||.++++.+++++.+++
T Consensus 18 ~E~~~p~~vl~~ag~~v~~~s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPGG~~~~~~l~~~~~l~~ 97 (194)
T 4gdh_A 18 IEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGGGLGAKTLSTTPFVQQ 97 (194)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEEEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEEECCCchhHhHhhhCHHHHH
Confidence 489999999999999999999854 34799999999999999988642 2 88777888999999999
Q ss_pred HHHHHHhC-CCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCeEcCCCCCCHHHHHHHHH
Q 023800 66 IVKKQASD-GRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALV 119 (277)
Q Consensus 66 ~l~~~~~~-g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~a~~li 119 (277)
|||+++++ +|++++||+|++ |+.+|+|+||+ |||+|||+|+++++||+++++
T Consensus 98 ~l~~~~~~~~k~iaaiC~g~~--l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d~~vV~Dg~iiTs~g~~~~~d~al~lv 175 (194)
T 4gdh_A 98 VVKEFYKKPNKWIGMICAGTL--TAKTSGLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLL 175 (194)
T ss_dssp HHHHHTTCTTCEEEEEGGGGH--HHHHTTCCCSEECCCGGGHHHHHHTTCEECCSSEEEETTEEEECSGGGHHHHHHHHH
T ss_pred HHHHhhhcCCceEEeeccccc--chhhceecCCceEecCcHHHHHHhcCCeeecceEEEcCCEEECCCHhHHHHHHHHHH
Confidence 99999865 899999999996 67888899998 999999999999999999999
Q ss_pred HHhcChhHHHHHhhccccc
Q 023800 120 EQLYGKGKADEVSGARVMR 138 (277)
Q Consensus 120 ~~l~g~~~a~~v~~~~~~~ 138 (277)
+++.|++.|+++++.|+|+
T Consensus 176 e~l~G~~~a~~va~~l~~P 194 (194)
T 4gdh_A 176 EQVASKDKYNAVYKSLSMP 194 (194)
T ss_dssp HHHSCHHHHHHHHHHTTCC
T ss_pred HHHcCHHHHHHHHhhccCC
Confidence 9999999999999999985
No 11
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=99.94 E-value=3.6e-27 Score=195.65 Aligned_cols=142 Identities=36% Similarity=0.525 Sum_probs=128.8
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCc--eeecCCCCEEecCcccccccc---C-----CCccchhccccChHHHHHHHHH
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQL--RVDACHGVKIVADALVSNCRD---A-----CGMPGATNLKESEVLESIVKKQ 70 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~--~v~~~~g~~v~~d~~~~~~~~---~-----gG~~~~~~~~~~~~~~~~l~~~ 70 (277)
.|+..|+++|+++||+++++|++++. +|++++|+.+.+|..+++++. + ||..++..++.++.+.+||+++
T Consensus 16 ~e~~~~~~~l~~ag~~v~~vs~~~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~ 95 (205)
T 2ab0_A 16 TEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQF 95 (205)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCCCceeecCCCeEEecCCCHHHCCcccCCEEEECCCcccHHHhccCHHHHHHHHHH
Confidence 37899999999999999999998743 899999999999999988632 2 7754566678899999999999
Q ss_pred HhCCCEEEEEchhH-HHHHHHcCCCCCCC-----------------------CCCe--EcCCCCCCHHHHHHHHHHHhcC
Q 023800 71 ASDGRLYAAICVFL-AVALGSWGLLKGLK-----------------------DGKV--VTTRGPGTPMEFVVALVEQLYG 124 (277)
Q Consensus 71 ~~~g~~i~aiC~g~-~~~La~aGll~g~~-----------------------dg~~--iT~~g~~~~~~~a~~li~~l~g 124 (277)
+++||+|++||+|+ + +|+++|||+||+ |||+ |||+|+++++||++++++++.|
T Consensus 96 ~~~gk~i~aiC~G~~~-lLa~aGlL~G~~~T~~~~~~~~~~~~~~~~~~vv~Dg~i~viTs~g~~s~~d~al~li~~l~g 174 (205)
T 2ab0_A 96 HRSGRIVAAICAAPAT-VLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVG 174 (205)
T ss_dssp HHTTCEEEEETHHHHH-HTTTTTSSSSSCBCCCGGGGGGSCTTTBCCCSEEEETTTTEEEECSGGGHHHHHHHHHHHHTC
T ss_pred HHcCCEEEEECHhHHH-HHHHCCccCCCeEEeCccHHHHccCCEEecCCEEEeCCcCeEECcChhhHHHHHHHHHHHhcC
Confidence 99999999999999 9 999999999998 8999 9999999999999999999999
Q ss_pred hhHHHHHhhcccccccCCC
Q 023800 125 KGKADEVSGARVMRANHGD 143 (277)
Q Consensus 125 ~~~a~~v~~~~~~~~~~~~ 143 (277)
++.|+++++.|++++.+..
T Consensus 175 ~~~a~~va~~l~~~~~r~~ 193 (205)
T 2ab0_A 175 REKAHEVASQLVMAAGIYN 193 (205)
T ss_dssp HHHHHHHHTTTTCCTTSCC
T ss_pred hHHHHHHHHhcccCCCCCc
Confidence 9999999999999976644
No 12
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=99.94 E-value=1.1e-27 Score=198.29 Aligned_cols=138 Identities=22% Similarity=0.289 Sum_probs=117.7
Q ss_pred CchhhHHHHHHhCC------CeEEEEeeCCCceeecCCCCEEecCccccccc--cC------CCccchhccccChHHHHH
Q 023800 1 MEAVITIDVLRRSG------ADVVVASVEKQLRVDACHGVKIVADALVSNCR--DA------CGMPGATNLKESEVLESI 66 (277)
Q Consensus 1 ~E~~~~~~~l~~~~------~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~~~ 66 (277)
+|+..|+++|++++ |+|+++|.++ .+|++++|+.+.+| .+++++ .. ||.. .... . +.+++|
T Consensus 19 ~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~-~~v~~~~G~~i~~d-~l~~~~~~~~D~livpGG~~-~~~~-~-~~l~~~ 93 (202)
T 3gra_A 19 ASFTVAMDVLVTANLLRADSFQFTPLSLDG-DRVLSDLGLELVAT-ELSAAALKELDLLVVCGGLR-TPLK-Y-PELDRL 93 (202)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEESSS-SEEEBTTSCEEECE-ECCSGGGTTCSEEEEECCTT-CCSC-C-TTHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCC-CceEcCCCCEEECC-CcccccCCCCCEEEEeCCCc-hhhc-c-HHHHHH
Confidence 37889999999886 9999999997 69999999999999 998853 22 7743 3322 3 899999
Q ss_pred HHHHHhCCCEEEEEchhHHHHHHHcCCCCCCC---------------------------CCCeEcCCCCCCHHHHHHHHH
Q 023800 67 VKKQASDGRLYAAICVFLAVALGSWGLLKGLK---------------------------DGKVVTTRGPGTPMEFVVALV 119 (277)
Q Consensus 67 l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~---------------------------dg~~iT~~g~~~~~~~a~~li 119 (277)
|++++++|++|++||+|++ +|+++|||+||+ |||+|||+|+++++||++++|
T Consensus 94 l~~~~~~g~~iaaIC~G~~-~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~v~dg~iiTs~G~~a~~dlal~li 172 (202)
T 3gra_A 94 LNDCAAHGMALGGLWNGAW-FLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLV 172 (202)
T ss_dssp HHHHHHHTCEEEEETTHHH-HHHHHTCCTTEEECCCGGGHHHHHHHCTTEEECSSSEEEETTEEEESSHHHHHHHHHHHH
T ss_pred HHHHHhhCCEEEEECHHHH-HHHHcCCcCCCcEEeChhHHHHHHHHCCCCEecCCeEEEeCCEEECCCHHHHHHHHHHHH
Confidence 9999999999999999999 999999999998 999999999999999999999
Q ss_pred HHhcChhHHHHHhhcccccccCCCc
Q 023800 120 EQLYGKGKADEVSGARVMRANHGDE 144 (277)
Q Consensus 120 ~~l~g~~~a~~v~~~~~~~~~~~~~ 144 (277)
+++.|++.|+++++.|++++.+..+
T Consensus 173 ~~~~G~~~A~~va~~l~~~~~~~~~ 197 (202)
T 3gra_A 173 RRLYGDGLAEGVEEILSFSGAREGH 197 (202)
T ss_dssp HHHHCHHHHHHHHHHHC--------
T ss_pred HHHhCHHHHHHHHHHhCcCcccccc
Confidence 9999999999999999999877554
No 13
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=99.93 E-value=3.6e-26 Score=184.82 Aligned_cols=113 Identities=15% Similarity=0.158 Sum_probs=106.8
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhc
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~ 240 (277)
++|.|++.+||++.|+..|+++|+++|+++.++|++++ ++++++|..+.+|..++++++.+||+|+||||. ++..+..
T Consensus 9 ~~v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~~-~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~-g~~~l~~ 86 (177)
T 4hcj_A 9 NILYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFIG-TAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGI-GCITLWD 86 (177)
T ss_dssp EEEEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSSE-EEEETTSCEEEECEEGGGCCGGGCSEEEECCSG-GGGGGTT
T ss_pred CEEEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-eEeeCCCCEEecCccHHHCCHhHCCEEEECCCc-cHHHHhh
Confidence 45777788999999999999999999999999999998 999999999999999999988999999999997 4667889
Q ss_pred CHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 241 SKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 241 ~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
++++.+||+++++++|+|++||+|++ +|+++|||+
T Consensus 87 ~~~~~~~l~~~~~~~k~iaaIC~g~~-~La~aGlL~ 121 (177)
T 4hcj_A 87 DWRTQGLAKLFLDNQKIVAGIGSGVV-IMANAKILE 121 (177)
T ss_dssp CHHHHHHHHHHHHTTCEEEEETTHHH-HHHHTTCCT
T ss_pred CHHHHHHHHHHHHhCCEEEEecccHH-HHHHCCCCC
Confidence 99999999999999999999999999 999999997
No 14
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=99.93 E-value=1.4e-25 Score=187.05 Aligned_cols=138 Identities=22% Similarity=0.284 Sum_probs=124.6
Q ss_pred CchhhHHHHHH--------hCCCeEEEEeeCCCceeecCCCCEEecCccccccc--cC------CCccchhccccChHHH
Q 023800 1 MEAVITIDVLR--------RSGADVVVASVEKQLRVDACHGVKIVADALVSNCR--DA------CGMPGATNLKESEVLE 64 (277)
Q Consensus 1 ~E~~~~~~~l~--------~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~ 64 (277)
+|+..|+++|+ +.+|+|+++|+++ .+|++++|+.+.+|..+++++ .+ ||. +. .+..++.++
T Consensus 19 ~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~-~~v~~~~G~~i~~d~~~~~~~~~~~D~livpGG~-~~-~~~~~~~l~ 95 (212)
T 3efe_A 19 WEYGYLIAELNSGRYFKKDLAPLKVITVGANK-EMITTMGGLRIKPDISLDECTLESKDLLILPGGT-TW-SEEIHQPIL 95 (212)
T ss_dssp TTTHHHHHHHHHCTTSCTTCCCCCEEEEESSS-CCEECTTCCEECCSEEGGGCCCCTTCEEEECCCS-CT-TSGGGHHHH
T ss_pred HHHHHHHHHHHhhhccccCCCCeEEEEEECCC-CeEEcCCCCEEecCcCHHHCCccCCCEEEECCCC-cc-ccccCHHHH
Confidence 58899999999 7899999999997 589999999999999999876 22 774 33 357889999
Q ss_pred HHHHHHHhCCCEEEEEchhHHHHHHHcCCCCCCC-----------------------------CCCeEcCCCCCCHHHHH
Q 023800 65 SIVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------------------------DGKVVTTRGPGTPMEFV 115 (277)
Q Consensus 65 ~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------------------------dg~~iT~~g~~~~~~~a 115 (277)
+||+++++++++|++||+|++ +|+++|||+||+ |||+|||+|++ ++||+
T Consensus 96 ~~l~~~~~~gk~iaaiC~G~~-~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~~~~~~~~~~V~Dg~iiTs~G~~-~~d~a 173 (212)
T 3efe_A 96 ERIGQALKIGTIVAAICGATD-ALANMGYLDTRKHTSNNLEYTKMVCPNYKGEKFYELGPAVSDANLVTASGIA-PLEFA 173 (212)
T ss_dssp HHHHHHHHHTCEEEEETHHHH-HHHHTTTTSSSCBCCSCHHHHHHHCTTCCCTTTBCCCSEEEETTEEEECTTC-HHHHH
T ss_pred HHHHHHHHCCCEEEEEcHHHH-HHHHcCCCCCCeeecCCHHHHHHHHhhCCCccccCCCcEEEECCEEECCCch-HHHHH
Confidence 999999999999999999999 999999999998 99999999996 99999
Q ss_pred HHHHHHhcChhHHHHHhhcccccccCCCc
Q 023800 116 VALVEQLYGKGKADEVSGARVMRANHGDE 144 (277)
Q Consensus 116 ~~li~~l~g~~~a~~v~~~~~~~~~~~~~ 144 (277)
+++|+++.|+ .++++++.|.+.+...+.
T Consensus 174 l~li~~l~g~-~a~~va~~~~~~~~g~~~ 201 (212)
T 3efe_A 174 MEVLKKIDVF-TLDALHSWYNLNKTHKPE 201 (212)
T ss_dssp HHHHHHHTCS-CHHHHHHHHHHHHHCCTH
T ss_pred HHHHHHhcCC-CHHHHHHHHHHHcCCCHH
Confidence 9999999997 999999999999766543
No 15
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=99.93 E-value=3.6e-25 Score=181.43 Aligned_cols=117 Identities=38% Similarity=0.614 Sum_probs=109.0
Q ss_pred CCCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCC-CceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH
Q 023800 158 DNSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVAD-KLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (277)
Q Consensus 158 ~~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~-~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~ 236 (277)
+|++||+|+++|||++.|+..|+++|+++|++++++|+++ + +|+++.|+.+.+|..++++++.+||+|+||||.....
T Consensus 3 ~m~kkv~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~-~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~~ 81 (190)
T 4e08_A 3 HMSKSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLNGGE-AVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGSN 81 (190)
T ss_dssp -CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSSS-CEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHHH
T ss_pred CCCcEEEEEECCCchHHHHHHHHHHHHHCCCEEEEEECCCCc-ceecCCCcEEECCCCHHHCCcccCCEEEECCCChHHH
Confidence 3668999999999999999999999999999999999998 6 8999999999999999998777899999999964556
Q ss_pred hhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 237 AFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
.+..++++.+||+++++++++|++||+|++ +||++|||+
T Consensus 82 ~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~-~La~aGlL~ 120 (190)
T 4e08_A 82 AMGESSLVGDLLRSQESGGGLIAAICAAPT-VLAKHGVAS 120 (190)
T ss_dssp HHHHCHHHHHHHHHHHHTTCEEEEETTTHH-HHHHTTCST
T ss_pred HhhhCHHHHHHHHHHHHCCCEEEEECHHHH-HHHHCCCcC
Confidence 678899999999999999999999999999 999999997
No 16
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=99.92 E-value=1.4e-25 Score=189.41 Aligned_cols=137 Identities=23% Similarity=0.319 Sum_probs=122.0
Q ss_pred CchhhHHHHHHhCC--CeEEEEeeCCCceeecCCCCEEecCccccccccC------CCccchhccccChHHHHHHHHHHh
Q 023800 1 MEAVITIDVLRRSG--ADVVVASVEKQLRVDACHGVKIVADALVSNCRDA------CGMPGATNLKESEVLESIVKKQAS 72 (277)
Q Consensus 1 ~E~~~~~~~l~~~~--~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (277)
+|+..|+++|++++ |+++++| ++ .+|++++|+.+.+|..+++.... ||..+...+..++.+++|| +++
T Consensus 34 ~e~~~p~dvl~~~~~~~~v~~vs-~~-~~V~ss~G~~v~~d~~l~~~~~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~ 109 (236)
T 3bhn_A 34 VDFFLMNDLLGRTSDSWTVRILG-TK-PEHHSQLGMTVKTDGHVSEVKEQDVVLITSGYRGIPAALQDENFMSAL--KLD 109 (236)
T ss_dssp HHHHHHHHHHTTCSSSEEEEEEE-SS-SEEEBTTCCEEECSEEGGGGGGCSEEEECCCTTHHHHHHTCHHHHHHC--CCC
T ss_pred HHHHHHHHHHHcCCCCEEEEEEE-CC-CcEEecCCcEEecCcccccccCCCEEEEcCCccCHhhhccCHHHHHHH--HhC
Confidence 37899999999876 8999999 76 68999999999999999875433 7734566678899999999 666
Q ss_pred CCC-EEEEEchhHHHHHHHcCCCCCCC-------------------------CCCeEcCCCCCCHHHHHHHHHHHhcChh
Q 023800 73 DGR-LYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKG 126 (277)
Q Consensus 73 ~g~-~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~a~~li~~l~g~~ 126 (277)
+++ +|++||+|++ +|+++|||+||+ |||+|||+|+++++||++++|+++.|++
T Consensus 110 ~~~~~IaaIC~G~~-lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~~vV~Dg~iiTs~G~~a~~dlal~lIe~l~G~~ 188 (236)
T 3bhn_A 110 PSRQLIGSICAGSF-VLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDLPLVIEGNIATAGGCLSLLYLVGWLAERLFDSV 188 (236)
T ss_dssp TTTCEEEEETTHHH-HHHHTTTTTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGGHHHHHHHHHHHHSCHH
T ss_pred CCCCEEEEEcHHHH-HHHHcCCCCCCEEECCHHHHHHHHHhCCccCCCcEEEeCCEEECCCHHHHHHHHHHHHHHhcCHH
Confidence 677 9999999999 999999999998 9999999999999999999999999999
Q ss_pred HHHHHhhcccccccCC
Q 023800 127 KADEVSGARVMRANHG 142 (277)
Q Consensus 127 ~a~~v~~~~~~~~~~~ 142 (277)
.|+++++.|++++.+.
T Consensus 189 ~A~~va~~l~~~~~~~ 204 (236)
T 3bhn_A 189 KRKQIQNQLIPAGQME 204 (236)
T ss_dssp HHHHHHTTTSCTTCHH
T ss_pred HHHHHHHhcccCCCCc
Confidence 9999999999986553
No 17
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=99.92 E-value=9e-25 Score=175.50 Aligned_cols=114 Identities=25% Similarity=0.422 Sum_probs=107.7
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~ 239 (277)
++||+|+++|||+..|+..|+++|+.+|++++++|++++ +++++.|+.+.++..++++++.+||+|+||||. ....+.
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~~~ 79 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRG-KITGKHGYSVNVDLTFEEVDPDEFDALVLPGGK-APEIVR 79 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSE-EEECTTSCEEEECEEGGGCCGGGCSEEEECCBS-HHHHHT
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-EEecCCCcEEeccCChhHCCHhhCCEEEECCCc-CHHHhc
Confidence 579999999999999999999999999999999999998 999999999999999999877789999999997 456677
Q ss_pred cCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 240 ~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
.++++.+||+++++++|+|++||+|++ +|+++|||+
T Consensus 80 ~~~~l~~~l~~~~~~~k~i~aiC~G~~-~La~aGlL~ 115 (168)
T 3l18_A 80 LNEKAVMITRRMFEDDKPVASICHGPQ-ILISAKVLK 115 (168)
T ss_dssp TCHHHHHHHHHHHHTTCCEEEETTTHH-HHHHTTCCT
T ss_pred cCHHHHHHHHHHHHCCCEEEEECHhHH-HHHHCCccC
Confidence 899999999999999999999999999 999999997
No 18
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=99.92 E-value=3.8e-25 Score=183.34 Aligned_cols=133 Identities=23% Similarity=0.290 Sum_probs=120.0
Q ss_pred CchhhHHHHHHhC-CCeEEEEeeCCCceeecCCCCEEecCccccccc-c-C-----CCccchhccccChHHHHHHHHHHh
Q 023800 1 MEAVITIDVLRRS-GADVVVASVEKQLRVDACHGVKIVADALVSNCR-D-A-----CGMPGATNLKESEVLESIVKKQAS 72 (277)
Q Consensus 1 ~E~~~~~~~l~~~-~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~-~-~-----gG~~~~~~~~~~~~~~~~l~~~~~ 72 (277)
+|++.|+++|+++ +|+++++|+++ . |++++|+.+.+|..++++. . + ||. +... .++.+++||+++++
T Consensus 17 ~E~~~~~~~l~~~~~~~v~~vs~~~-~-V~~~~G~~v~~d~~l~~~~~~~D~livpGG~-~~~~--~~~~l~~~l~~~~~ 91 (206)
T 3f5d_A 17 WEGVYLASALNQREDWSVHTVSLDP-I-VSSIGGFKTSVDYIIGLEPANFNLLVMIGGD-SWSN--DNKKLLHFVKTAFQ 91 (206)
T ss_dssp TTSHHHHHHHHTSTTEEEEEEESSS-E-EEBTTSCEEECSEETTSSCSCCSEEEECCBS-CCCC--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCeEEEEEECCC-C-EEecCCcEEecCcChhhCCcCCCEEEEcCCC-Chhh--cCHHHHHHHHHHHH
Confidence 5899999999998 99999999997 5 9999999999999998874 2 2 764 4443 89999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC----------------------------CCCeEcCCCCCCHHHHHHHHHHHhcC
Q 023800 73 DGRLYAAICVFLAVALGSWGLLKGLK----------------------------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (277)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~----------------------------dg~~iT~~g~~~~~~~a~~li~~l~g 124 (277)
++++|++||+|++ +|+++|||+||+ |||+|||+|++ ++||++++|+.+.
T Consensus 92 ~gk~iaaiC~G~~-~La~aGLL~Gr~aTthw~~~~~~~~~~~~~~~~~~~~~V~Dg~iiTs~G~a-~id~al~li~~l~- 168 (206)
T 3f5d_A 92 KNIPIAAICGAVD-FLAKNGLLNNHSHTGNFVYLWKDYKQYKPISSFVEKQAVRDKNLVTANGTA-PIEFTNLILEMID- 168 (206)
T ss_dssp TTCCEEEETHHHH-HHHHTTTTTTSCBCCSCGGGGTTCTTCCCSSCBCCSSEEEETTEEEECTTC-HHHHHHHHHHHTT-
T ss_pred cCCEEEEECHHHH-HHHHcCCCCCCEEEccCHHHhhhhHhhcCCCeEccCCEEEECCEEECCCch-HHHHHHHHHHHhC-
Confidence 9999999999999 999999999998 99999999997 9999999999865
Q ss_pred hhHHHHHhhcccccccC
Q 023800 125 KGKADEVSGARVMRANH 141 (277)
Q Consensus 125 ~~~a~~v~~~~~~~~~~ 141 (277)
.+.|+++++.|++.+..
T Consensus 169 ~~~a~~va~~~~~~~~g 185 (206)
T 3f5d_A 169 FDTPENIEKMMYMNRYG 185 (206)
T ss_dssp CSCHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHhhhhhcc
Confidence 68999999999998754
No 19
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=99.92 E-value=8.9e-25 Score=181.59 Aligned_cols=116 Identities=41% Similarity=0.628 Sum_probs=108.2
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCC-CceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVAD-KLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~-~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
+++||+|+++|||++.|+..|+++|+++|++++++|+++ + +|++++|+.+.++..++++++++||+|+||||....+.
T Consensus 8 m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~-~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~~~ 86 (208)
T 3ot1_A 8 MSKRILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGDKL-QVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQA 86 (208)
T ss_dssp -CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSCS-EEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHHHH
T ss_pred cCCeEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCc-ceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHHHH
Confidence 568999999999999999999999999999999999996 6 99999999999999999987778999999999754666
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhh-HHhhhhCCCCC
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASP-ALVLEPHGLLK 276 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~-~~lLa~aGlL~ 276 (277)
+..++++.+||+++++++|+|++||+|+ + +|+++|||+
T Consensus 87 l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~-~La~aGlL~ 125 (208)
T 3ot1_A 87 FADSTALLALIDAFSQQGKLVAAICATPAL-VFAKQQKFV 125 (208)
T ss_dssp HHTCHHHHHHHHHHHHTTCEEEEETTHHHH-TTTTTTCST
T ss_pred HhhCHHHHHHHHHHHHcCCEEEEEChhHHH-HHHHCCccC
Confidence 7889999999999999999999999999 9 999999997
No 20
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=99.92 E-value=2.1e-24 Score=177.90 Aligned_cols=117 Identities=38% Similarity=0.551 Sum_probs=107.9
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhh-ccCCccEEEEcCCcchHHh
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEA-AKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~-~~~~~D~livpGG~~~~~~ 237 (277)
+++||+|+++|||++.|+..|+++|+++|++++++|++++.+++++.|+.+.++..++++ ++.+||+|+||||......
T Consensus 2 m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~~~ 81 (197)
T 2rk3_A 2 ASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQN 81 (197)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHHHH
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCCccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhHHH
Confidence 357999999999999999999999999999999999987547999999999999999987 6678999999999644556
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
+..++++.+||+++++++|+|++||+|++ +||++|||+
T Consensus 82 l~~~~~~~~~l~~~~~~gk~i~aiC~G~~-~La~aGll~ 119 (197)
T 2rk3_A 82 LSESAAVKEILKEQENRKGLIATICAGPT-ALLAHEIGF 119 (197)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETTTHH-HHHHTTCST
T ss_pred hhhCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHCCCCC
Confidence 77899999999999999999999999999 999999997
No 21
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=99.91 E-value=1.1e-24 Score=175.06 Aligned_cols=120 Identities=24% Similarity=0.352 Sum_probs=110.1
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCcccccccc---C-----CCccchhccccChHHHHHHHHHHh
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD---A-----CGMPGATNLKESEVLESIVKKQAS 72 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~---~-----gG~~~~~~~~~~~~~~~~l~~~~~ 72 (277)
.|+..|+++|+++||+++++|+++ .+|++++|+.+.+|..+++++. + ||. +...++.++.+.+||+++++
T Consensus 16 ~e~~~~~~~l~~ag~~v~~vs~~~-~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~~~~~~~l~~~l~~~~~ 93 (168)
T 3l18_A 16 LELIYPLHRIKEEGHEVYVASFQR-GKITGKHGYSVNVDLTFEEVDPDEFDALVLPGGK-APEIVRLNEKAVMITRRMFE 93 (168)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSS-EEEECTTSCEEEECEEGGGCCGGGCSEEEECCBS-HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCC-CEEecCCCcEEeccCChhHCCHhhCCEEEECCCc-CHHHhccCHHHHHHHHHHHH
Confidence 378899999999999999999997 6999999999999999998753 2 774 56667889999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCeEcCCCCCCHHHHHHHHHHHhc
Q 023800 73 DGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLY 123 (277)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~a~~li~~l~ 123 (277)
++++|++||+|++ +|+++|||+||+ |||+|||+|++++++|+++++++|.
T Consensus 94 ~~k~i~aiC~G~~-~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~d~~l~li~~l~ 168 (168)
T 3l18_A 94 DDKPVASICHGPQ-ILISAKVLKGRRGTSTITIRDDVINAGAEWIDAEVVVDGNWVSSRHPGDLYAWMREFVKLLH 168 (168)
T ss_dssp TTCCEEEETTTHH-HHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGHHHHHHHHGGGCC
T ss_pred CCCEEEEECHhHH-HHHHCCccCCCEEEeCccHHHHHHhCCCEEecCCEEEeCCEEEcCCHHHHHHHHHHHHHhhC
Confidence 9999999999999 999999999998 9999999999999999999999763
No 22
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=99.91 E-value=4.9e-24 Score=176.70 Aligned_cols=116 Identities=47% Similarity=0.631 Sum_probs=108.1
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCc--eEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKL--EILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~--~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
++||+|+++|||+..|+..|+++|+++|++++++|++++. +|.+++|+.+.++..++++++++||+|+||||......
T Consensus 2 ~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~~~ 81 (205)
T 2ab0_A 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAEC 81 (205)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHH
T ss_pred CcEEEEEEcCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCCceeecCCCeEEecCCCHHHCCcccCCEEEECCCcccHHH
Confidence 5799999999999999999999999999999999999864 79999999999999999987778999999999755666
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhh-HHhhhhCCCCC
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASP-ALVLEPHGLLK 276 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~-~~lLa~aGlL~ 276 (277)
+..++++.+||+++++++|+|++||+|+ + +|+++|||+
T Consensus 82 l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~-lLa~aGlL~ 120 (205)
T 2ab0_A 82 FRDSTLLVETVKQFHRSGRIVAAICAAPAT-VLVPHDIFP 120 (205)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETHHHHH-HTTTTTSSS
T ss_pred hccCHHHHHHHHHHHHcCCEEEEECHhHHH-HHHHCCccC
Confidence 7789999999999999999999999999 9 999999997
No 23
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=99.91 E-value=6.4e-24 Score=174.38 Aligned_cols=116 Identities=23% Similarity=0.352 Sum_probs=108.0
Q ss_pred CCCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCce-EEcccCc-EEEeCcchhhhccCCccEEEEcCCcchH
Q 023800 158 DNSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLE-ILASCQV-KLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (277)
Q Consensus 158 ~~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~-v~~~~g~-~i~~~~~~~~~~~~~~D~livpGG~~~~ 235 (277)
.+++||+|+++|||+..|+..|+++|+++|++++++|++++ + |.++.|+ .+.++..++++++.+||+|+||||. +.
T Consensus 21 ~~~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG~-~~ 98 (193)
T 1oi4_A 21 GLSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAG-KTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGH-SP 98 (193)
T ss_dssp TCCCEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTT-CEEECTTSSCEEECCEEGGGCCGGGCSEEEECCBT-HH
T ss_pred ccCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCC-cceecCCCCeEEECCCChHHCCcccCCEEEECCCc-CH
Confidence 46789999999999999999999999999999999999988 6 9999999 9999999998766789999999995 45
Q ss_pred HhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 236 QAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
..+..++++.+||+++++++++|++||+|++ +||++|||+
T Consensus 99 ~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~-lLa~aGLL~ 138 (193)
T 1oi4_A 99 DYLRGDNRFVTFTRDFVNSGKPVFAICHGPQ-LLISADVIR 138 (193)
T ss_dssp HHHTTSHHHHHHHHHHHHTTCCEEEETTTHH-HHHHHTCCT
T ss_pred HHhhhCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHCCccC
Confidence 6677789999999999999999999999999 999999997
No 24
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=99.91 E-value=4.4e-24 Score=174.62 Aligned_cols=134 Identities=26% Similarity=0.376 Sum_probs=119.2
Q ss_pred CchhhHHHHHHh-CCCeEEEEeeCCCceeecCCCCEEecCcccccccc---C-----CCccchhccccChHHHHHHHHHH
Q 023800 1 MEAVITIDVLRR-SGADVVVASVEKQLRVDACHGVKIVADALVSNCRD---A-----CGMPGATNLKESEVLESIVKKQA 71 (277)
Q Consensus 1 ~E~~~~~~~l~~-~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~---~-----gG~~~~~~~~~~~~~~~~l~~~~ 71 (277)
+|+..|+++|++ .+|+++++|+++ .+|++++|+.+.+|..+++++. + ||. +.. ...++.+++||++++
T Consensus 15 ~e~~~~~~~l~~a~~~~v~~vs~~~-~~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~-~~~-~~~~~~l~~~l~~~~ 91 (188)
T 2fex_A 15 WEPALLAAAARSYLGVEIVHATPDG-MPVTSMGGLKVTPDTSYDALDPVDIDALVIPGGL-SWE-KGTAADLGGLVKRFR 91 (188)
T ss_dssp TSSHHHHHHHHHHSCCEEEEEETTS-SCEECTTCCEEECSEEGGGCCTTTCSEEEECCBS-HHH-HTCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCceEEEEeCCC-CceeeCCCcEEeccccHHHCCcccCCEEEECCCC-ccc-ccccHHHHHHHHHHH
Confidence 488999999999 999999999997 5899999999999999988752 2 764 333 467899999999999
Q ss_pred hCCCEEEEEchhHHHHHHHcCCCCCCC-----------------------------CCCeEcCCCCCCHHHHHHHHHHHh
Q 023800 72 SDGRLYAAICVFLAVALGSWGLLKGLK-----------------------------DGKVVTTRGPGTPMEFVVALVEQL 122 (277)
Q Consensus 72 ~~g~~i~aiC~g~~~~La~aGll~g~~-----------------------------dg~~iT~~g~~~~~~~a~~li~~l 122 (277)
+++++|++||+|++ +|+++|||+||+ |||+|||+|++ ++||++++++++
T Consensus 92 ~~~k~i~aiC~G~~-~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~~-~~d~al~lv~~l 169 (188)
T 2fex_A 92 DRDRLVAGICAAAS-ALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQPRAVSDGGVVTAAGSA-PVSFAVEILKSL 169 (188)
T ss_dssp HTTCEEEEETHHHH-HHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCSSCEEETTEEEECTTC-HHHHHHHHHHHT
T ss_pred HCCCEEEEECHHHH-HHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCCCEEEECCEEECCCcc-HHHHHHHHHHHc
Confidence 99999999999999 999999999988 88999999997 899999999999
Q ss_pred cChhHHHHHhhcccccccC
Q 023800 123 YGKGKADEVSGARVMRANH 141 (277)
Q Consensus 123 ~g~~~a~~v~~~~~~~~~~ 141 (277)
.|.+.++ ++.+.|....
T Consensus 170 ~~~~~~~--~~~~~~~~~~ 186 (188)
T 2fex_A 170 GLFGPEA--EAELQIFAAE 186 (188)
T ss_dssp TCCSHHH--HHHHGGGGGG
T ss_pred cCCCHHH--HHHHHHHHcc
Confidence 9998887 8888877544
No 25
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=99.91 E-value=6.1e-24 Score=173.99 Aligned_cols=116 Identities=23% Similarity=0.366 Sum_probs=106.1
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEc-----ccCcEEEeCcchhhhccCCccEEEEcCCcc
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILA-----SCQVKLVADMLIDEAAKLSYDLIVLPGGLG 233 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~-----~~g~~i~~~~~~~~~~~~~~D~livpGG~~ 233 (277)
+++||+|+++|||+..|+..|+++|+.+|++++++|++++ ++.+ +.|+.+.++..++++++.+||+|+||||..
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~ 86 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPG-EIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTV 86 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSS-EEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCC-ccccccccccCCcEEeCCCChhhCChhhCCEEEECCCch
Confidence 3579999999999999999999999999999999999998 8887 779999999999988767899999999964
Q ss_pred hHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 234 GAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 234 ~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
....+..++++.+||+++++++++|++||+|++ +||++|||+
T Consensus 87 ~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~-~La~aGlL~ 128 (190)
T 2vrn_A 87 NPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPW-SLSETGIAQ 128 (190)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTH-HHHHTTTTT
T ss_pred hHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHH-HHHhCcccC
Confidence 566677899999999999999999999999999 999999997
No 26
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=99.91 E-value=1.1e-24 Score=178.43 Aligned_cols=126 Identities=26% Similarity=0.310 Sum_probs=112.3
Q ss_pred chhhHHHHHHhCCCeEEEEeeCCCceeec-----CCCCEEecCccccccc--c-C-----CCccchhccccChHHHHHHH
Q 023800 2 EAVITIDVLRRSGADVVVASVEKQLRVDA-----CHGVKIVADALVSNCR--D-A-----CGMPGATNLKESEVLESIVK 68 (277)
Q Consensus 2 E~~~~~~~l~~~~~~v~~~s~~~~~~v~~-----~~g~~v~~d~~~~~~~--~-~-----gG~~~~~~~~~~~~~~~~l~ 68 (277)
|+..|+++|+++||+++++|+++ .++++ ++|+.+.+|..+++++ . + ||..+...++.++.+++||+
T Consensus 24 e~~~~~~~l~~ag~~v~~vs~~~-~~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~l~~~l~ 102 (190)
T 2vrn_A 24 ELTSPRAAIEAAGGTTELISLEP-GEIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTVNPDKLRLEEGAMKFVR 102 (190)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSS-SEEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEecCC-CccccccccccCCcEEeCCCChhhCChhhCCEEEECCCchhHHHHhhCHHHHHHHH
Confidence 78899999999999999999997 57887 7799999999998873 2 2 77545666788999999999
Q ss_pred HHHhCCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCeEcCCCCCCHHHHHHHHHHHh-
Q 023800 69 KQASDGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQL- 122 (277)
Q Consensus 69 ~~~~~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~a~~li~~l- 122 (277)
++++++++|++||+|++ +|+++|||+||+ |||+|||+|++++++|++++++++
T Consensus 103 ~~~~~gk~i~aiC~G~~-~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~~~~v~Dg~iiTs~g~~s~~~~~l~li~~l~ 181 (190)
T 2vrn_A 103 DMYDAGKPIAAICHGPW-SLSETGIAQGLKMTSWSSLKRELTLAGAQWVDEECVTDKGVVTSRKPDDLPAFNKKIVEEFA 181 (190)
T ss_dssp HHHHTTCCEEEC-CTTH-HHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSCEEETTEEECSSGGGHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECHhHH-HHHhCcccCCcEEecCccHHHHHHHcCCeEECCCEEEcCCEEEcCChhhHHHHHHHHHHHHh
Confidence 99999999999999999 999999999998 999999999999999999999999
Q ss_pred cChhHHH
Q 023800 123 YGKGKAD 129 (277)
Q Consensus 123 ~g~~~a~ 129 (277)
.|++.|+
T Consensus 182 ~g~~~a~ 188 (190)
T 2vrn_A 182 EGDHSSR 188 (190)
T ss_dssp HCCCGGG
T ss_pred ccccccc
Confidence 8887664
No 27
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.91 E-value=1.7e-24 Score=192.70 Aligned_cols=134 Identities=25% Similarity=0.362 Sum_probs=120.8
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeecCCCC-EEecCcccccccc---C-----CCccchhccccChHHHHHHHHHH
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGV-KIVADALVSNCRD---A-----CGMPGATNLKESEVLESIVKKQA 71 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~-~v~~d~~~~~~~~---~-----gG~~~~~~~~~~~~~~~~l~~~~ 71 (277)
+|+..|+++|+++||+|+++|++++..|++++|+ .+.+|..+++++. + ||. ++..++.++.+.+||++++
T Consensus 24 ~El~~p~dvL~~Ag~~v~vvS~~~g~~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~-g~~~l~~~~~l~~~Lr~~~ 102 (365)
T 3fse_A 24 TEFIIPCNGLKQAGFEVVVLGSRMNEKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGM-APDKMRRNPNTVRFVQEAM 102 (365)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSCCEECTTSCCEECCSEETTTCCGGGCSEEEECCBT-HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCceeecCCCceEEeCCCCHhhCCCcCCCEEEEECCc-chhhccCCHHHHHHHHHHH
Confidence 3789999999999999999999974239999999 9999999988752 2 774 6666788999999999999
Q ss_pred hCCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCeEcCCCCCCHHHHHHHHHHHhcChh
Q 023800 72 SDGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKG 126 (277)
Q Consensus 72 ~~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~a~~li~~l~g~~ 126 (277)
++|++|++||+|++ +|+++|||+||+ |||+|||+|+++++||++++|+++.|.+
T Consensus 103 ~~gk~IaAIC~G~~-lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~~vV~DGniITs~G~~a~~d~al~lIe~L~g~~ 181 (365)
T 3fse_A 103 EQGKLVAAVCHGPQ-VLIEGDLLRGKQATGFIAISKDMMNAGADYLDEALVVDGNLITSREPGDLAIFTTAILSRLGYGG 181 (365)
T ss_dssp HTTCEEEEETTTHH-HHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGHHHHHHHHHHHTTCCC
T ss_pred HCCCEEEEECHHHH-HHHHcCCcCCCEEEeChHHHHHHHhCCCEEecCcEEEECCEEECCCHHHHHHHHHHHHHHhcCch
Confidence 99999999999999 999999999999 9999999999999999999999999998
Q ss_pred HHHHHhhccc
Q 023800 127 KADEVSGARV 136 (277)
Q Consensus 127 ~a~~v~~~~~ 136 (277)
.++++++.+-
T Consensus 182 ~A~~lA~~~~ 191 (365)
T 3fse_A 182 KDAALPDEKD 191 (365)
T ss_dssp SSSCCCCTTC
T ss_pred HHHHHhhhhh
Confidence 8887776554
No 28
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=99.90 E-value=1.9e-23 Score=178.14 Aligned_cols=115 Identities=17% Similarity=0.275 Sum_probs=106.1
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHH-HhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDIL-RRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l-~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
+++||+|+++|||+++|+.+|+++| +.++++++++|++++ +|+++.|+.+.+|..+++++ ..||+|+||||..+...
T Consensus 22 m~~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~-~V~~~~G~~i~~d~~l~~~~-~~yD~liVPGG~~g~~~ 99 (253)
T 3ewn_A 22 GDEQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLD-PVTSDAGLAIVPTATFGTCP-RDLTVLFAPGGTDGTLA 99 (253)
T ss_dssp CCCEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSS-CEECTTSCEECCSEETTTSC-SSCSEEEECCBSHHHHH
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCC-eEEcCCCCEEeCCcCHHHcC-CCCCEEEECCCccchhh
Confidence 5589999999999999999999999 567999999999998 99999999999999999876 47899999999633556
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
+..++++.+||+++++++++|++||+|++ +||++|||+
T Consensus 100 l~~~~~l~~~Lr~~~~~gk~IaaICtG~~-lLa~AGLL~ 137 (253)
T 3ewn_A 100 AASDAETLAFMADRGARAKYITSVCSGSL-ILGAAGLLK 137 (253)
T ss_dssp HTTCHHHHHHHHHHHTTCSEEEEETTHHH-HHHHTTCCT
T ss_pred hccCHHHHHHHHHHHHcCCEEEEEChHHH-HHHHcCCCC
Confidence 77899999999999999999999999999 999999997
No 29
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=99.90 E-value=1.5e-23 Score=174.73 Aligned_cols=113 Identities=20% Similarity=0.289 Sum_probs=105.5
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHH--------hCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCC
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILR--------RAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~--------~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG 231 (277)
++||+|+++|||++.|+..|+++|+ +++++++++|++++ +|++++|+.+.+|..++++++.+||+|+||||
T Consensus 5 m~~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~-~v~~~~G~~i~~d~~~~~~~~~~~D~livpGG 83 (212)
T 3efe_A 5 TKKAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKE-MITTMGGLRIKPDISLDECTLESKDLLILPGG 83 (212)
T ss_dssp CCCEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSC-CEECTTCCEECCSEEGGGCCCCTTCEEEECCC
T ss_pred ccEEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCC-eEEcCCCCEEecCcCHHHCCccCCCEEEECCC
Confidence 5799999999999999999999999 67899999999998 99999999999999999987778999999999
Q ss_pred cchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 232 LGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
.. . .+..++++.+||+++++++++|++||+|++ +||++|||+
T Consensus 84 ~~-~-~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~-~La~aGlL~ 125 (212)
T 3efe_A 84 TT-W-SEEIHQPILERIGQALKIGTIVAAICGATD-ALANMGYLD 125 (212)
T ss_dssp SC-T-TSGGGHHHHHHHHHHHHHTCEEEEETHHHH-HHHHTTTTS
T ss_pred Cc-c-ccccCHHHHHHHHHHHHCCCEEEEEcHHHH-HHHHcCCCC
Confidence 64 2 357789999999999999999999999999 999999997
No 30
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=99.90 E-value=6.3e-24 Score=175.61 Aligned_cols=112 Identities=20% Similarity=0.225 Sum_probs=102.2
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCC------CeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCc
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAK------ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL 232 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~------~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~ 232 (277)
+++||+|+++|||+++|+.+|+|+|+.+| |+++++|.+++ +|++++|+.+.+| .+++++.++||+|+||||.
T Consensus 4 ~~~~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~-~v~~~~G~~i~~d-~l~~~~~~~~D~livpGG~ 81 (202)
T 3gra_A 4 APYRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGD-RVLSDLGLELVAT-ELSAAALKELDLLVVCGGL 81 (202)
T ss_dssp -CEEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSS-EEEBTTSCEEECE-ECCSGGGTTCSEEEEECCT
T ss_pred CcEEEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC-ceEcCCCCEEECC-CcccccCCCCCEEEEeCCC
Confidence 45799999999999999999999999987 99999999998 9999999999999 9998766789999999996
Q ss_pred chHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 233 GGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
.. ... . +++.+||+++++++++|++||+|++ +||++|||+
T Consensus 82 ~~-~~~-~-~~l~~~l~~~~~~g~~iaaIC~G~~-~La~aGLL~ 121 (202)
T 3gra_A 82 RT-PLK-Y-PELDRLLNDCAAHGMALGGLWNGAW-FLGRAGVLD 121 (202)
T ss_dssp TC-CSC-C-TTHHHHHHHHHHHTCEEEEETTHHH-HHHHHTCCT
T ss_pred ch-hhc-c-HHHHHHHHHHHhhCCEEEEECHHHH-HHHHcCCcC
Confidence 43 222 3 8999999999999999999999999 999999997
No 31
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=99.90 E-value=2.3e-23 Score=175.69 Aligned_cols=113 Identities=20% Similarity=0.284 Sum_probs=105.5
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHh-CCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRR-AKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~-a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
|++||+|+++|||+.+|+.+|+++|++ ++++++++|++++ +|++++|+.+.+|..++++ ++||+|+||||. +...
T Consensus 4 m~~~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~-~V~~~~G~~v~~d~~l~~~--~~~D~livpGG~-g~~~ 79 (231)
T 3noq_A 4 MAVQIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPG-PVVASSGLVLQATTSFADC--PPLDVICIPGGT-GVGA 79 (231)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSE-EEECTTSCEEEECEETTTC--CCCSEEEECCST-THHH
T ss_pred CcEEEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCC-cEEcCCCCEEecccChhHC--CcCCEEEECCCC-Chhh
Confidence 567999999999999999999999999 7999999999998 9999999999999999986 369999999996 4566
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
+..++++.+||+++++++++|++||+|++ +|+++|||+
T Consensus 80 ~~~~~~l~~~lr~~~~~g~~v~aiC~G~~-~La~aGLL~ 117 (231)
T 3noq_A 80 LMEDPQALAFIRQQAARARYVTSVSTGSL-VLGAAGLLQ 117 (231)
T ss_dssp HTTCHHHHHHHHHHHTTCSEEEEETTHHH-HHHHTTTTT
T ss_pred hccCHHHHHHHHHHHhcCCEEEEECHHHH-HHHHcCCCC
Confidence 77899999999999999999999999999 999999997
No 32
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=99.90 E-value=2.2e-23 Score=173.24 Aligned_cols=114 Identities=11% Similarity=0.084 Sum_probs=103.8
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCC-------CeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCC
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAK-------ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~-------~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG 231 (277)
+++||+|+++|||+++|+.+|+|+|+.+| |+++++|.+++ +|++++|+.+.+|..++++ ++||+|+||||
T Consensus 7 ~~~~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~-~v~~~~G~~v~~d~~~~~~--~~~D~livpGg 83 (209)
T 3er6_A 7 KNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNR-PLIGRGGISVQPTAQWQSF--DFTNILIIGSI 83 (209)
T ss_dssp CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSS-CEEETTTEEEECSSCGGGC--SCCSEEEECCC
T ss_pred CCeEEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCC-ceecCCCeEEeCCcCcccc--CCCCEEEECCC
Confidence 46799999999999999999999999986 89999999998 9999999999999999986 47999999999
Q ss_pred cchHH-hhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 232 LGGAQ-AFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 232 ~~~~~-~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
..... .+..++++.+||+++++++++|++||+|++ +||++|||+
T Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~-~La~aGLL~ 128 (209)
T 3er6_A 84 GDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIF-VVAKAGLLQ 128 (209)
T ss_dssp SCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHH-HHHHHTCCS
T ss_pred CCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHH-HHHHcCCCC
Confidence 64222 236799999999999999999999999999 999999997
No 33
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=99.89 E-value=2.9e-23 Score=169.73 Aligned_cols=113 Identities=21% Similarity=0.369 Sum_probs=105.0
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHh-CCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRR-AKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~-a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
|+||+|+++|||++.|+..|+++|++ ++++++++|++++ +|++++|+.+.++..++++++.+||+|+||||.. .. .
T Consensus 1 m~~i~ill~~g~~~~e~~~~~~~l~~a~~~~v~~vs~~~~-~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~-~~-~ 77 (188)
T 2fex_A 1 MTRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGM-PVTSMGGLKVTPDTSYDALDPVDIDALVIPGGLS-WE-K 77 (188)
T ss_dssp CCEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSS-CEECTTCCEEECSEEGGGCCTTTCSEEEECCBSH-HH-H
T ss_pred CcEEEEEeCCCchHHHHHHHHHHHhhcCCceEEEEeCCCC-ceeeCCCcEEeccccHHHCCcccCCEEEECCCCc-cc-c
Confidence 37999999999999999999999999 9999999999998 9999999999999999998767899999999963 33 4
Q ss_pred hcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
..++.+.+||+++++++++|++||+|++ +||++|||+
T Consensus 78 ~~~~~l~~~l~~~~~~~k~i~aiC~G~~-~La~aGlL~ 114 (188)
T 2fex_A 78 GTAADLGGLVKRFRDRDRLVAGICAAAS-ALGGTGVLN 114 (188)
T ss_dssp TCCCCCHHHHHHHHHTTCEEEEETHHHH-HHHHTTTTT
T ss_pred cccHHHHHHHHHHHHCCCEEEEECHHHH-HHHHCCCcC
Confidence 6788999999999999999999999999 999999997
No 34
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.89 E-value=8.3e-23 Score=181.87 Aligned_cols=115 Identities=24% Similarity=0.362 Sum_probs=107.1
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCce-EEcccCc-EEEeCcchhhhccCCccEEEEcCCcchHH
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLE-ILASCQV-KLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~-v~~~~g~-~i~~~~~~~~~~~~~~D~livpGG~~~~~ 236 (277)
+++||+|+++|||++.|+.+|+++|+.+|++++++|++++ + |.++.|+ .+.+|..++++++.+||+|+||||. ++.
T Consensus 9 ~mkkV~ILl~dgf~~~El~~p~dvL~~Ag~~v~vvS~~~g-~~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~-g~~ 86 (365)
T 3fse_A 9 GKKKVAILIEQAVEDTEFIIPCNGLKQAGFEVVVLGSRMN-EKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGM-APD 86 (365)
T ss_dssp --CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSS-CCEECTTSCCEECCSEETTTCCGGGCSEEEECCBT-HHH
T ss_pred CceEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEECCCC-ceeecCCCceEEeCCCCHhhCCCcCCCEEEEECCc-chh
Confidence 4689999999999999999999999999999999999998 6 9999999 9999999999877789999999997 456
Q ss_pred hhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 237 AFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
.+..++.+.+||+++++++++|++||+|++ +||++|||+
T Consensus 87 ~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~-lLA~AGLLd 125 (365)
T 3fse_A 87 KMRRNPNTVRFVQEAMEQGKLVAAVCHGPQ-VLIEGDLLR 125 (365)
T ss_dssp HHTTCHHHHHHHHHHHHTTCEEEEETTTHH-HHHHTTCCT
T ss_pred hccCCHHHHHHHHHHHHCCCEEEEECHHHH-HHHHcCCcC
Confidence 678899999999999999999999999999 999999997
No 35
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=99.89 E-value=5.1e-23 Score=171.26 Aligned_cols=113 Identities=17% Similarity=0.284 Sum_probs=104.2
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhC--CCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRA--KANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a--~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~ 236 (277)
+++||+|+++|||+++|+.+|+++|+++ +++++++|++++ +|+++.|+.+.+|..+++++ .||+|+||||. ...
T Consensus 3 ~~~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~-~V~~~~G~~v~~d~~~~~~~--~~D~livpGG~-~~~ 78 (211)
T 3mgk_A 3 LSYRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGG-LVESSQKVRVETSLYTRDEN--IEKILFVPGGS-GTR 78 (211)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCE-EEECTTCCEEEEBCCCCCSS--SEEEEEECCST-HHH
T ss_pred CceEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCC-eEecCCCcEEEeccchhhCC--CCCEEEECCCc-chh
Confidence 4579999999999999999999999998 499999999998 99999999999999998864 59999999996 455
Q ss_pred hhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 237 AFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
.+..++++.+||+++++++++|++||+|++ +||++|||+
T Consensus 79 ~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~-~La~aGLL~ 117 (211)
T 3mgk_A 79 EKVNDDNFINFIGNMVKESKYIISVCTGSA-LLSKAGILN 117 (211)
T ss_dssp HHTTCHHHHHHHHHHHHHCSEEEECTTHHH-HHHHTTTTT
T ss_pred hhcCCHHHHHHHHHHHHcCCEEEEEchHHH-HHHhcCCcC
Confidence 677899999999999999999999999999 999999997
No 36
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=99.89 E-value=8.2e-23 Score=167.78 Aligned_cols=119 Identities=21% Similarity=0.285 Sum_probs=108.5
Q ss_pred chhhHHHHHHhCCCeEEEEeeCCCce-eecCCCC-EEecCccccccc--c-C-----CCccchhccccChHHHHHHHHHH
Q 023800 2 EAVITIDVLRRSGADVVVASVEKQLR-VDACHGV-KIVADALVSNCR--D-A-----CGMPGATNLKESEVLESIVKKQA 71 (277)
Q Consensus 2 E~~~~~~~l~~~~~~v~~~s~~~~~~-v~~~~g~-~v~~d~~~~~~~--~-~-----gG~~~~~~~~~~~~~~~~l~~~~ 71 (277)
|+..|+++|+++||++.++|+++ .+ |++++|+ .+.+|..+++++ . + || .+...+..++.+.+||++++
T Consensus 38 e~~~~~~~l~~ag~~v~~vs~~~-~~~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG-~~~~~l~~~~~l~~~l~~~~ 115 (193)
T 1oi4_A 38 EFTSPADEFRKAGHEVITIEKQA-GKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGG-HSPDYLRGDNRFVTFTRDFV 115 (193)
T ss_dssp HHHHHHHHHHHTTCEEEEEESST-TCEEECTTSSCEEECCEEGGGCCGGGCSEEEECCB-THHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCC-CcceecCCCCeEEECCCChHHCCcccCCEEEECCC-cCHHHhhhCHHHHHHHHHHH
Confidence 67899999999999999999997 46 9999999 999999998863 2 2 77 46666778999999999999
Q ss_pred hCCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCC-eEcCCCCCCHHHHHHHHHHHhc
Q 023800 72 SDGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGK-VVTTRGPGTPMEFVVALVEQLY 123 (277)
Q Consensus 72 ~~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~-~iT~~g~~~~~~~a~~li~~l~ 123 (277)
+++++|++||+|++ +|+++|||+||+ ||| +|||+|+++++||++++++++.
T Consensus 116 ~~gk~i~aIC~G~~-lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~~v~Dg~~iiTs~g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 116 NSGKPVFAICHGPQ-LLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLG 192 (193)
T ss_dssp HTTCCEEEETTTHH-HHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTTEEEESSGGGHHHHHHHHHHHHC
T ss_pred HcCCEEEEECHHHH-HHHHCCccCCCEEEeChhHHHHHHHcCCEEecCCEEEECCEEEECCCcchHHHHHHHHHHHhh
Confidence 99999999999999 999999999998 999 9999999999999999999974
No 37
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=99.88 E-value=1.4e-22 Score=167.80 Aligned_cols=110 Identities=25% Similarity=0.345 Sum_probs=102.1
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhC-CCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRA-KANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a-~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
++||+|+++|||++.|+..|.+.|+++ +++++++|++++ |+++.|+.+.+|..++++ +++||+|+||||.. ...
T Consensus 3 m~kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~~--V~~~~G~~v~~d~~l~~~-~~~~D~livpGG~~-~~~- 77 (206)
T 3f5d_A 3 LKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPI--VSSIGGFKTSVDYIIGLE-PANFNLLVMIGGDS-WSN- 77 (206)
T ss_dssp CEEEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSE--EEBTTSCEEECSEETTSS-CSCCSEEEECCBSC-CCC-
T ss_pred ccEEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCCC--EEecCCcEEecCcChhhC-CcCCCEEEEcCCCC-hhh-
Confidence 579999999999999999999999998 999999999985 899999999999999987 46899999999963 443
Q ss_pred hcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
.++++.+||+++++++++|++||+|++ +||++|||+
T Consensus 78 -~~~~l~~~l~~~~~~gk~iaaiC~G~~-~La~aGLL~ 113 (206)
T 3f5d_A 78 -DNKKLLHFVKTAFQKNIPIAAICGAVD-FLAKNGLLN 113 (206)
T ss_dssp -CCHHHHHHHHHHHHTTCCEEEETHHHH-HHHHTTTTT
T ss_pred -cCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHcCCCC
Confidence 889999999999999999999999999 999999997
No 38
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.88 E-value=2.7e-22 Score=162.03 Aligned_cols=118 Identities=19% Similarity=0.342 Sum_probs=103.1
Q ss_pred hhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCcccccc----ccC------CC--ccchhccc---cChHHHHHHH
Q 023800 4 VITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNC----RDA------CG--MPGATNLK---ESEVLESIVK 68 (277)
Q Consensus 4 ~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~----~~~------gG--~~~~~~~~---~~~~~~~~l~ 68 (277)
+..++.+.+++|+++++|++++.+|++++|+.+.+|..++++ ..+ || .++...+. .++.+++||+
T Consensus 19 ~~~~e~~~~~~~~v~~vs~~~~~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~ 98 (175)
T 3cne_A 19 FQYLEAFFENGISYKVFAVSDTKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIK 98 (175)
T ss_dssp HHHHHHHHHTTCEEEEEESSSSSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHH
T ss_pred chhhheeeeCCCEEEEEECCCCCceecCCCeEEEeccCHHHhccCcccCCEEEECCCcCcccHHHHhhcccCHHHHHHHH
Confidence 444555558899999999985468999999999999999886 222 77 54555555 7899999999
Q ss_pred HHHhCCCEEEEEchhHHHHHHHcCCCCCCC-----------------------CCCeEcCCCCCCHHHHHHHHHHHh
Q 023800 69 KQASDGRLYAAICVFLAVALGSWGLLKGLK-----------------------DGKVVTTRGPGTPMEFVVALVEQL 122 (277)
Q Consensus 69 ~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------------------dg~~iT~~g~~~~~~~a~~li~~l 122 (277)
++++++++|++||+|++ +|+++|||+||+ |||+|||+|+++++||++++++++
T Consensus 99 ~~~~~gk~i~aiC~G~~-~La~aGlL~G~~~T~~~~~~~~l~~~~~~~~~~v~Dg~iiTs~g~~~~~d~al~li~~l 174 (175)
T 3cne_A 99 TFGEKGKMMIGHCAGAM-MFDFTGITKGKKVAVHPLAKPAIQNGIATDEKSEIDGNFFTAQDENTIWTMLPKVIEAL 174 (175)
T ss_dssp HHHHTTCEEEEETTHHH-HHHHTTTTTTCEEECCGGGGGGCCSSEEESSSEEEETTEEEESSGGGGGGTHHHHHHHH
T ss_pred HHHHCCCEEEEECHHHH-HHHHCCCcCCCEEEeCccHHHHhhcCEEeCCCEEEeCCEEeCCChHHHHHHHHHHHHHh
Confidence 99999999999999999 999999999998 999999999999999999999987
No 39
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.87 E-value=7.4e-23 Score=173.58 Aligned_cols=125 Identities=19% Similarity=0.278 Sum_probs=105.7
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceee---------------------cCCCCEEecCccccccccC--------CCc
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVD---------------------ACHGVKIVADALVSNCRDA--------CGM 51 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~---------------------~~~g~~v~~d~~~~~~~~~--------gG~ 51 (277)
.|++.|+++|+++|++|+++|++++.++. ++++..+.++..+++++.. ||+
T Consensus 29 ~E~~~p~~~l~~aG~~V~iaS~~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~v~~~~yD~l~vpGG~ 108 (244)
T 3kkl_A 29 VEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKVFFASAGH 108 (244)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSSCCCBCTTC--------------------CHHHHHTCEEGGGCCGGGCSEEEECCST
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCCCcCCccccccccCHHHHHHHHHhhHHHHHHhcCCCChHHCCHhhCCEEEEcCCC
Confidence 38999999999999999999998743331 1334567778888887532 886
Q ss_pred cchhccccChHHHHHHHHHHhCCCEEEEEchhHHHHHHHc-------CCCCCCC--------------------------
Q 023800 52 PGATNLKESEVLESIVKKQASDGRLYAAICVFLAVALGSW-------GLLKGLK-------------------------- 98 (277)
Q Consensus 52 ~~~~~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a-------Gll~g~~-------------------------- 98 (277)
.+++.++.++.+.+||++++++||+|+|||+|++ +|+++ |||+||+
T Consensus 109 ~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~-~La~a~~~~~g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~~~l 187 (244)
T 3kkl_A 109 GALFDYPKAKNLQDIASKIYANGGVIAAICHGPL-LFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTV 187 (244)
T ss_dssp THHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTTSSBTTTTCEECCSCHHHHHHHTTHHHHHHTTCCCH
T ss_pred chhhhcccCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHhhccccCCceeCCceecCCCcHHHHhhhhhhhccccccccH
Confidence 5557789999999999999999999999999999 99999 9999976
Q ss_pred ------------------------CCCeEcCCCCCCHHHHHHHHHHHhcChh
Q 023800 99 ------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKG 126 (277)
Q Consensus 99 ------------------------dg~~iT~~g~~~~~~~a~~li~~l~g~~ 126 (277)
|||+|||+||+++.+|++++|+++.+.+
T Consensus 188 ~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~~ 239 (244)
T 3kkl_A 188 ERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSVE 239 (244)
T ss_dssp HHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC--
T ss_pred HHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhhh
Confidence 7899999999999999999999998754
No 40
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=99.87 E-value=5.5e-22 Score=162.88 Aligned_cols=116 Identities=22% Similarity=0.330 Sum_probs=99.8
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCC--ceEEcccCcEEEeCcchhhhcc-----CCccEEEEcCC
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADK--LEILASCQVKLVADMLIDEAAK-----LSYDLIVLPGG 231 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~--~~v~~~~g~~i~~~~~~~~~~~-----~~~D~livpGG 231 (277)
+|+||+|+++|||+++|+.+|+++|+++|+++++++...+ .++++++|+.+.+|..+++++. ++||+|+||||
T Consensus 3 ~M~kV~ill~dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPGG 82 (194)
T 4gdh_A 3 HMVKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGG 82 (194)
T ss_dssp --CCEEEEEETTCCHHHHHHHHHHHHHTTCCEEEEEESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECCC
T ss_pred CCCEEEEEECCCcCHHHHHHHHHHHHHCCCeEEEEEEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEEECCC
Confidence 4689999999999999999999999999999999987543 3689999999999999987653 35999999999
Q ss_pred cchHHhhhcCHHHHHHHHHHHHc-CCcEEEEchhhHHhhhhCCCCC
Q 023800 232 LGGAQAFAKSKKLVNMLKKQKES-NRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~-~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
..+.+.++.++.+.+||++++++ +|+|++||+|++ |+++|+|+
T Consensus 83 ~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~--l~~aglL~ 126 (194)
T 4gdh_A 83 GLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTL--TAKTSGLP 126 (194)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGH--HHHHTTCC
T ss_pred chhHhHhhhCHHHHHHHHHhhhcCCceEEeeccccc--chhhceec
Confidence 76678889999999999999865 789999999987 45566665
No 41
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.87 E-value=6.1e-22 Score=166.24 Aligned_cols=116 Identities=23% Similarity=0.325 Sum_probs=103.4
Q ss_pred CCCeEEEEec----------CCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEccc--------C-----cEEEeCcch
Q 023800 159 NSPQILVPIA----------NGSEEMEAVIIIDILRRAKANVVVASVADKLEILASC--------Q-----VKLVADMLI 215 (277)
Q Consensus 159 ~~~kV~ill~----------~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~--------g-----~~i~~~~~~ 215 (277)
|++||+|+++ +||+..|+..|+++|+++|++++++|++++ ++.+.. | ..+.++..+
T Consensus 4 m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~-~v~~~~~~~~~~~~~~~~~~~~i~~~~~l 82 (224)
T 1u9c_A 4 MSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGG-EVPLDPRSINEKDPSWAEAEAALKHTARL 82 (224)
T ss_dssp CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCB-CCCBCGGGSSSCCGGGHHHHHHTTSBEEC
T ss_pred CCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCC-ccccCccccccHHHHHhhhhHhhcCCCCh
Confidence 3479999999 999999999999999999999999999987 666442 3 678888888
Q ss_pred hhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCC------CCC
Q 023800 216 DEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHG------LLK 276 (277)
Q Consensus 216 ~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aG------lL~ 276 (277)
+++++.+||+|+||||......+..++.+.+||+++++++|+|++||+|++ +|+++| ||+
T Consensus 83 ~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~-~La~ag~~~g~~lL~ 148 (224)
T 1u9c_A 83 SKDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPS-GLVNATYKDGTPIVK 148 (224)
T ss_dssp CGGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTSCBTTT
T ss_pred HHcChhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHH-HHHHccccCCCceec
Confidence 888777899999999975445578899999999999999999999999999 999999 886
No 42
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.87 E-value=2.8e-22 Score=169.65 Aligned_cols=117 Identities=25% Similarity=0.353 Sum_probs=101.5
Q ss_pred CCCeEEEEec-----CCCchhhHHHHHHHHHhCCCeEEEEeeCCCc----------eEEcccCcEEEeC-------cchh
Q 023800 159 NSPQILVPIA-----NGSEEMEAVIIIDILRRAKANVVVASVADKL----------EILASCQVKLVAD-------MLID 216 (277)
Q Consensus 159 ~~~kV~ill~-----~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~----------~v~~~~g~~i~~~-------~~~~ 216 (277)
|++||+|++. |||+..|+..|+++|+++|++|+++|+++++ ++.++.|+.+.++ ..++
T Consensus 22 M~kkV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~~~~g~~v~~s~g~~v~~d~~~~~~~~~l~ 101 (242)
T 3l3b_A 22 MALNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQVVDHKKKESVGEVRNILVESARIARGSVYDIE 101 (242)
T ss_dssp --CEEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSSBCSCEEETTTTEEESCCCBHHHHHHHHTTTCEEEGG
T ss_pred ccCEEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCcccccccccCccccccCCeEEecchhccccCCChH
Confidence 4489999998 9999999999999999999999999998751 4667788888887 6788
Q ss_pred hhccCCccEEEEcCCcchHHhh-----------hcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCC-CCC
Q 023800 217 EAAKLSYDLIVLPGGLGGAQAF-----------AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHG-LLK 276 (277)
Q Consensus 217 ~~~~~~~D~livpGG~~~~~~~-----------~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aG-lL~ 276 (277)
++++++||+|+||||......+ +.++.+.+||+++++++|+|++||+|++ +|+++| ||+
T Consensus 102 dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~-~La~ag~lL~ 172 (242)
T 3l3b_A 102 QIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPA-VVVALLKDIA 172 (242)
T ss_dssp GCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHH-HHHHHHTTTC
T ss_pred HCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHhCcccC
Confidence 8877889999999997543322 5579999999999999999999999999 999999 986
No 43
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.86 E-value=4.7e-22 Score=166.94 Aligned_cols=123 Identities=24% Similarity=0.310 Sum_probs=107.1
Q ss_pred chhhHHHHHHhCCCeEEEEeeCCCceeecCC--------C-----CEEecCcccccccc---C-----CCccchhccccC
Q 023800 2 EAVITIDVLRRSGADVVVASVEKQLRVDACH--------G-----VKIVADALVSNCRD---A-----CGMPGATNLKES 60 (277)
Q Consensus 2 E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~--------g-----~~v~~d~~~~~~~~---~-----gG~~~~~~~~~~ 60 (277)
|+..|+++|+++||+|+++|+++ .++++.. | ..+.++..+++++. + ||......+..+
T Consensus 30 e~~~p~~~l~~ag~~v~~vs~~~-~~v~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~D~livpGG~~~~~~l~~~ 108 (224)
T 1u9c_A 30 EFAVPYLVFQEKGYDVKVASIQG-GEVPLDPRSINEKDPSWAEAEAALKHTARLSKDDAHGFDAIFLPGGHGTMFDFPDN 108 (224)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSC-BCCCBCGGGSSSCCGGGHHHHHHTTSBEECCGGGGSSCSEEEECCCTTHHHHSTTC
T ss_pred HHHHHHHHHHHCCCeEEEECCCC-CccccCccccccHHHHHhhhhHhhcCCCChHHcChhhCCEEEECCCcchHHHhhcC
Confidence 88999999999999999999997 5666442 3 67888888888642 2 775444567889
Q ss_pred hHHHHHHHHHHhCCCEEEEEchhHHHHHHHcC------CCCCCC------------------------------------
Q 023800 61 EVLESIVKKQASDGRLYAAICVFLAVALGSWG------LLKGLK------------------------------------ 98 (277)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG------ll~g~~------------------------------------ 98 (277)
+.+.+||+++++++|+|++||+|++ +|+++| ||+||+
T Consensus 109 ~~l~~~l~~~~~~~k~iaaiC~G~~-~La~ag~~~g~~lL~Gr~~T~~~~~~~~~~~~~~~~p~~~~~~l~~~g~~~~~~ 187 (224)
T 1u9c_A 109 ETLQYVLQQFAEDGRIIAAVCHGPS-GLVNATYKDGTPIVKGKTVTSFTDEEEREVGLDVHMPFLLESTLRLRGANFVRG 187 (224)
T ss_dssp HHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTSCBTTTTCEECCSCHHHHHHHTCGGGSSSCHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHHHHCCCEEEEEChHHH-HHHHccccCCCceecCcEEecCCCHHHhhccccccCCccHHHHHHHcCCEEecC
Confidence 9999999999999999999999999 999999 999976
Q ss_pred ---------CCCeEcCCCCCCHHHHHHHHHHHhcChh
Q 023800 99 ---------DGKVVTTRGPGTPMEFVVALVEQLYGKG 126 (277)
Q Consensus 99 ---------dg~~iT~~g~~~~~~~a~~li~~l~g~~ 126 (277)
|||+|||+|++++++|++++++++.|++
T Consensus 188 ~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~~ 224 (224)
T 1u9c_A 188 GKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEERE 224 (224)
T ss_dssp STTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTTC
T ss_pred CCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhccC
Confidence 6899999999999999999999999864
No 44
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.86 E-value=2.6e-21 Score=156.33 Aligned_cols=110 Identities=23% Similarity=0.314 Sum_probs=96.8
Q ss_pred CCeEEEEecC---C---CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhh--ccCCccEEEEcCC
Q 023800 160 SPQILVPIAN---G---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEA--AKLSYDLIVLPGG 231 (277)
Q Consensus 160 ~~kV~ill~~---g---~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~--~~~~~D~livpGG 231 (277)
++||+|+++| | |++.|+.. +++++++++|++++.++++++|+.+.++..++++ ++++||+|+||||
T Consensus 2 ~~~v~ill~~~~~g~~~~~~~e~~~------~~~~~v~~vs~~~~~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpGG 75 (175)
T 3cne_A 2 AKKVAVLAVNPVNGCGLFQYLEAFF------ENGISYKVFAVSDTKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCG 75 (175)
T ss_dssp CCEEEEEECSSBCHHHHHHHHHHHH------HTTCEEEEEESSSSSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECC
T ss_pred CcEEEEEEecCcCCCccchhhheee------eCCCEEEEEECCCCCceecCCCeEEEeccCHHHhccCcccCCEEEECCC
Confidence 5799999999 9 88877766 7899999999995338999999999999999987 6678999999999
Q ss_pred --cchHHhhh---cCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 232 --LGGAQAFA---KSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 232 --~~~~~~~~---~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
......+. .++++.+||+++++++|+|++||+|++ +||++|||+
T Consensus 76 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~-~La~aGlL~ 124 (175)
T 3cne_A 76 DAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAM-MFDFTGITK 124 (175)
T ss_dssp TTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHH-HHHHTTTTT
T ss_pred cCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHH-HHHHCCCcC
Confidence 53344455 788999999999999999999999999 999999997
No 45
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.85 E-value=1e-20 Score=179.07 Aligned_cols=112 Identities=12% Similarity=0.133 Sum_probs=107.0
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
+++||+||+.|||+..|+..++++|+++|++|.++|++++ +|+++.|..+.+|.++++++..+||+|+|||| +...+
T Consensus 599 ~grKVaILlaDGfEe~El~~pvdaLr~AG~~V~vVS~~~g-~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG--g~~~L 675 (753)
T 3ttv_A 599 KGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMG-EVTADDGTVLPIAATFAGAPSLTVDAVIVPCG--NIADI 675 (753)
T ss_dssp TTCEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSS-EEECTTSCEEECCEETTTSCGGGCSEEEECCS--CGGGT
T ss_pred CCCEEEEEecCCCCHHHHHHHHHHHHHCCCEEEEEEcCCC-eEEeCCCCEEecccchhhCCCcCCCEEEECCC--ChHHh
Confidence 4589999999999999999999999999999999999998 89999999999999999998888999999999 46778
Q ss_pred hcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCC
Q 023800 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGL 274 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGl 274 (277)
+.++.+++||+++++++|+|++||+|++ +|+++||
T Consensus 676 r~d~~vl~~Vre~~~~gKpIAAIC~Gp~-lLa~AGL 710 (753)
T 3ttv_A 676 ADNGDANYYLMEAYKHLKPIALAGDARK-FKATIKI 710 (753)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEEGGGGG-GGGGGTC
T ss_pred hhCHHHHHHHHHHHhcCCeEEEECchHH-HHHHcCC
Confidence 9999999999999999999999999999 9999998
No 46
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.84 E-value=9.2e-22 Score=166.97 Aligned_cols=124 Identities=20% Similarity=0.212 Sum_probs=102.3
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeecC---------------------CCCEEec-CccccccccC--------CC
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDAC---------------------HGVKIVA-DALVSNCRDA--------CG 50 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~---------------------~g~~v~~-d~~~~~~~~~--------gG 50 (277)
.|+++|+++|+++||+|+++|++++.++... ++..+.. +..+++++.. ||
T Consensus 35 ~E~~~p~~~l~~aG~~V~~aSp~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~v~~~~yD~l~ipGG 114 (247)
T 3n7t_A 35 SEALHPFNELTAAGFEVDVASETGTFGWDEHSLTQEYLSKEDEKVLHSEHNHFMEKMNKQVFKAGDLAPHDYGLMFVCGG 114 (247)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSCCCBCSGGGSGGGCCHHHHHHHTCSSCHHHHHHHHCCEEGGGSCGGGCSEEEECCS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCcccCcccccccccCHHHHHHHHhhhHHHHHHHhccCCCHHHCChhhCCEEEEeCC
Confidence 3899999999999999999999874333211 1123445 6777776532 88
Q ss_pred ccchhccccChHHHHHHHHHHhCCCEEEEEchhHHHHHHHc------CCCCCCC--------------------------
Q 023800 51 MPGATNLKESEVLESIVKKQASDGRLYAAICVFLAVALGSW------GLLKGLK-------------------------- 98 (277)
Q Consensus 51 ~~~~~~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a------Gll~g~~-------------------------- 98 (277)
+...+.++.++.+.+||++++++||+|+|||+|++ +|+++ |||+||+
T Consensus 115 ~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~-~La~a~~~~g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~~~l 193 (247)
T 3n7t_A 115 HGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPA-MLPGIHDENGDSVIKDKTVTGFTTKGEIMIKVIDKMREDHLHTI 193 (247)
T ss_dssp TTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGGGCBCTTSSBTTTTCEECCCCHHHHHHTTCHHHHHHTTCCCH
T ss_pred CchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHH-HHHHhhcccCCccccCceecCCCcHHHhhhhhhhhccccchhhH
Confidence 63346789999999999999999999999999999 99999 9999976
Q ss_pred ------------------------CCCeEcCCCCCCHHHHHHHHHHHhcCh
Q 023800 99 ------------------------DGKVVTTRGPGTPMEFVVALVEQLYGK 125 (277)
Q Consensus 99 ------------------------dg~~iT~~g~~~~~~~a~~li~~l~g~ 125 (277)
|||+|||+||.++.+|+++++++|.+.
T Consensus 194 ~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~~ 244 (247)
T 3n7t_A 194 ADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEGI 244 (247)
T ss_dssp HHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhhh
Confidence 689999999999999999999998653
No 47
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=99.84 E-value=3.9e-21 Score=162.19 Aligned_cols=111 Identities=21% Similarity=0.345 Sum_probs=99.0
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCC--CeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAK--ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~--~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~ 236 (277)
+++||+|+++|||++.|+..|+++|+.++ |+++++| +++ +|+++.|+.+.+|..+++. .+||+|+||||..+..
T Consensus 19 ~~~kV~ill~dGf~~~e~~~p~dvl~~~~~~~~v~~vs-~~~-~V~ss~G~~v~~d~~l~~~--~~~D~liVPGG~~g~~ 94 (236)
T 3bhn_A 19 GMYKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILG-TKP-EHHSQLGMTVKTDGHVSEV--KEQDVVLITSGYRGIP 94 (236)
T ss_dssp -CEEEEEECCTTBCHHHHHHHHHHHTTCSSSEEEEEEE-SSS-EEEBTTCCEEECSEEGGGG--GGCSEEEECCCTTHHH
T ss_pred CCCEEEEEeCCCChHHHHHHHHHHHHcCCCCEEEEEEE-CCC-cEEecCCcEEecCcccccc--cCCCEEEEcCCccCHh
Confidence 45799999999999999999999999976 8999999 887 9999999999999999873 5799999999942455
Q ss_pred hhhcCHHHHHHHHHHHHcCC-cEEEEchhhHHhhhhCCCCC
Q 023800 237 AFAKSKKLVNMLKKQKESNR-PYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~-~i~aiC~G~~~lLa~aGlL~ 276 (277)
.+..++++.+|| ++++++ +|++||+|++ +|+++|||+
T Consensus 95 ~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~-lLa~AGLL~ 132 (236)
T 3bhn_A 95 AALQDENFMSAL--KLDPSRQLIGSICAGSF-VLHELGLLK 132 (236)
T ss_dssp HHHTCHHHHHHC--CCCTTTCEEEEETTHHH-HHHHTTTTT
T ss_pred hhccCHHHHHHH--HhCCCCCEEEEEcHHHH-HHHHcCCCC
Confidence 577899999999 667777 9999999999 999999997
No 48
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.84 E-value=6.8e-21 Score=161.49 Aligned_cols=116 Identities=17% Similarity=0.248 Sum_probs=100.4
Q ss_pred CCeEEEEec------------CCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEE---------------------cccC
Q 023800 160 SPQILVPIA------------NGSEEMEAVIIIDILRRAKANVVVASVADKLEIL---------------------ASCQ 206 (277)
Q Consensus 160 ~~kV~ill~------------~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~---------------------~~~g 206 (277)
|+||+|++. +||+..|+..|+++|+++|++|+++|++++.++. ++.+
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 82 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFN 82 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSCCCBCTTC--------------------CH
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcCCccccccccCHHHHHHHHHhhHHHH
Confidence 478999987 3889999999999999999999999999873231 1234
Q ss_pred cEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC-------CCCC
Q 023800 207 VKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH-------GLLK 276 (277)
Q Consensus 207 ~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a-------GlL~ 276 (277)
..+.++..++++++++||+|+||||....+.++.++.+.+||+++++++|+|++||+|++ +|+++ |||+
T Consensus 83 ~~l~~~~~l~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~-~La~a~~~~~g~gll~ 158 (244)
T 3kkl_A 83 KALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPL-LFDGLIDIKTTRPLIE 158 (244)
T ss_dssp HHHHTCEEGGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTTSSBTTT
T ss_pred HHhcCCCChHHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHhhccccCCceeC
Confidence 567778889998888999999999986556788999999999999999999999999999 99999 9986
No 49
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.84 E-value=6.2e-21 Score=162.05 Aligned_cols=115 Identities=18% Similarity=0.261 Sum_probs=101.2
Q ss_pred CCeEEEEec------------CCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEE---c-------------------cc
Q 023800 160 SPQILVPIA------------NGSEEMEAVIIIDILRRAKANVVVASVADKLEIL---A-------------------SC 205 (277)
Q Consensus 160 ~~kV~ill~------------~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~---~-------------------~~ 205 (277)
|+||+|++. +|++..|+..|+++|+++|++|+++|++++ ++. + ..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~-~~~d~~s~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGK-FGWDEHSLAKDFLNGQDETDFKNKDSDF 81 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSC-CCBCGGGGSTTTSCHHHHHHHHCTTSHH
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCC-CCcCcccccccccChHHHHHHHhhhHHH
Confidence 468999997 689999999999999999999999999987 432 1 23
Q ss_pred CcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCC-------CCC
Q 023800 206 QVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHG-------LLK 276 (277)
Q Consensus 206 g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aG-------lL~ 276 (277)
|..+.++..++++++++||+|+||||......+..++.+.+||+++++++++|++||+|++ +||++| ||+
T Consensus 82 g~~l~~~~~l~~v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~-~La~ag~~~~g~~lL~ 158 (243)
T 1rw7_A 82 NKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPA-IFDGLTDKKTGRPLIE 158 (243)
T ss_dssp HHHHHTCBCGGGCCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTTSSBTTT
T ss_pred HhhhccCCChHHCCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHH-HHHhcCcccCCceeeC
Confidence 6678888899988777899999999976556678899999999999999999999999999 999999 986
No 50
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.83 E-value=2e-20 Score=169.83 Aligned_cols=116 Identities=22% Similarity=0.344 Sum_probs=105.6
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCc---------------eEEcccCcEEEeCcchhhhccCCc
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKL---------------EILASCQVKLVADMLIDEAAKLSY 223 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~---------------~v~~~~g~~i~~~~~~~~~~~~~~ 223 (277)
+++||+|+++|||+..|+..|+++|+++|++++++|+++++ .+.++.|..+.++..++++++++|
T Consensus 11 ~~~kv~ill~dg~e~~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 90 (396)
T 3uk7_A 11 NSRTVLILCGDYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSKY 90 (396)
T ss_dssp CCCEEEEECCTTEEHHHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGGC
T ss_pred cCCeEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCcccC
Confidence 46899999999999999999999999999999999998651 245677999999999999877889
Q ss_pred cEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 224 DLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 224 D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
|+|+||||.. ...+..++.+.+||+++++++|+|++||+|++ +|+++|||+
T Consensus 91 D~livpGG~~-~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~-~La~aGlL~ 141 (396)
T 3uk7_A 91 DGLVIPGGRA-PEYLALTASVVELVKEFSRSGKPIASICHGQL-ILAAADTVN 141 (396)
T ss_dssp SEEEECCBSH-HHHHTTCHHHHHHHHHHHHTTCCEEEETTTHH-HHHHTTCCT
T ss_pred CEEEECCCcc-hhhcccCHHHHHHHHHHHHcCCEEEEECchHH-HHHhccccC
Confidence 9999999974 55678899999999999999999999999999 999999997
No 51
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.83 E-value=8.6e-21 Score=160.10 Aligned_cols=113 Identities=24% Similarity=0.426 Sum_probs=97.3
Q ss_pred CCCeEEEEec-----CCCchhhHHHHHHHHHhCCCeEEEEeeCCCc-eE---------EcccCcEEEeC-------cchh
Q 023800 159 NSPQILVPIA-----NGSEEMEAVIIIDILRRAKANVVVASVADKL-EI---------LASCQVKLVAD-------MLID 216 (277)
Q Consensus 159 ~~~kV~ill~-----~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~-~v---------~~~~g~~i~~~-------~~~~ 216 (277)
.++||+|+++ |||+..|++.|+++|+++|++|+++|+++++ ++ .++.|+.+.++ ..++
T Consensus 5 ~m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~~~~v~d~~s~~~~~~~~g~~i~~~~~~~~~~~~l~ 84 (232)
T 1vhq_A 5 TMKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLA 84 (232)
T ss_dssp -CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGG
T ss_pred cCCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCCCcccccccccchhhhhhhhHHHHHhhhcCCCCHH
Confidence 3579999999 9999999999999999999999999999862 13 67788888887 7788
Q ss_pred hhccCCccEEEEcCCcchHHhh----------hcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 217 EAAKLSYDLIVLPGGLGGAQAF----------AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 217 ~~~~~~~D~livpGG~~~~~~~----------~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
++++++||+|+||||....+.+ +.++.+.+||+++++++++|++||+|++ +||++
T Consensus 85 ~~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~-~La~a 149 (232)
T 1vhq_A 85 QADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPA-MLPKI 149 (232)
T ss_dssp GCCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGG-GHHHH
T ss_pred HcCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHH
Confidence 8766789999999997532212 2489999999999999999999999999 89998
No 52
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.83 E-value=2.1e-21 Score=164.95 Aligned_cols=122 Identities=20% Similarity=0.271 Sum_probs=103.4
Q ss_pred chhhHHHHHHhCCCeEEEEeeCCCceee--c-------------------CCCCEEecCcccccccc--C------CCcc
Q 023800 2 EAVITIDVLRRSGADVVVASVEKQLRVD--A-------------------CHGVKIVADALVSNCRD--A------CGMP 52 (277)
Q Consensus 2 E~~~~~~~l~~~~~~v~~~s~~~~~~v~--~-------------------~~g~~v~~d~~~~~~~~--~------gG~~ 52 (277)
|++.|+++|+++||+|+++|++++.++. + +.|+.+.++..+++++. + ||+.
T Consensus 30 E~~~p~~vl~~ag~~v~~~s~~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~l~~v~~~~~D~livpGG~~ 109 (243)
T 1rw7_A 30 EALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHG 109 (243)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSSCCCBCGGGGSTTTSCHHHHHHHHCTTSHHHHHHHTCBCGGGCCGGGEEEEEECCSTT
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCcCcccccccccChHHHHHHHhhhHHHHhhhccCCChHHCCHhhCcEEEECCCCC
Confidence 8999999999999999999998742231 1 23667888888887642 1 8865
Q ss_pred chhccccChHHHHHHHHHHhCCCEEEEEchhHHHHHHHcC-------CCCCCC---------------------------
Q 023800 53 GATNLKESEVLESIVKKQASDGRLYAAICVFLAVALGSWG-------LLKGLK--------------------------- 98 (277)
Q Consensus 53 ~~~~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG-------ll~g~~--------------------------- 98 (277)
++..+..++.+.+||++++++|++|+|||+|++ +|+++| ||+||+
T Consensus 110 ~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~-~La~ag~~~~g~~lL~G~~~T~~~~~~e~~~~~~~~~p~~~~~~l~ 188 (243)
T 1rw7_A 110 TLFDYPKAKDLQDIASEIYANGGVVAAVCHGPA-IFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILKAKNLATVE 188 (243)
T ss_dssp HHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTTSSBTTTTCEECCSCHHHHHHTTCHHHHHHTTCCCHH
T ss_pred chhhcccCHHHHHHHHHHHHcCCEEEEECCCHH-HHHhcCcccCCceeeCCcEEeecCCHHHhhccccccccccccccHH
Confidence 556688899999999999999999999999999 999999 999863
Q ss_pred -----------------------CCCeEcCCCCCCHHHHHHHHHHHhcC
Q 023800 99 -----------------------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (277)
Q Consensus 99 -----------------------dg~~iT~~g~~~~~~~a~~li~~l~g 124 (277)
|||+|||+|++++++|++++|+++..
T Consensus 189 ~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~ 237 (243)
T 1rw7_A 189 DVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 (243)
T ss_dssp HHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC-
T ss_pred HHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhh
Confidence 67999999999999999999998854
No 53
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.82 E-value=3.2e-20 Score=157.51 Aligned_cols=116 Identities=25% Similarity=0.292 Sum_probs=98.9
Q ss_pred CCeEEEEecC------------CCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcc---------------------cC
Q 023800 160 SPQILVPIAN------------GSEEMEAVIIIDILRRAKANVVVASVADKLEILAS---------------------CQ 206 (277)
Q Consensus 160 ~~kV~ill~~------------g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~---------------------~g 206 (277)
|+||+|++.+ ||+..|+..|+++|+++|++|+++|++++.++... .+
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 88 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGTFGWDEHSLTQEYLSKEDEKVLHSEHNHFM 88 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSSCCCBCSGGGSGGGCCHHHHHHHTCSSCHHH
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCCCcccCcccccccccCHHHHHHHHhhhHHHH
Confidence 5799999986 88999999999999999999999999987333211 12
Q ss_pred cEEEe-CcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC------CCCC
Q 023800 207 VKLVA-DMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH------GLLK 276 (277)
Q Consensus 207 ~~i~~-~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a------GlL~ 276 (277)
..+.. +..++++++++||+|+||||......++.++.+.+||+++++++|+|++||+|++ +|+++ |||+
T Consensus 89 ~~l~~~~~~l~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~-~La~a~~~~g~gll~ 164 (247)
T 3n7t_A 89 EKMNKQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPA-MLPGIHDENGDSVIK 164 (247)
T ss_dssp HHHHHCCEEGGGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGGGCBCTTSSBTTT
T ss_pred HHHhccCCCHHHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHH-HHHHhhcccCCcccc
Confidence 23455 7788888888999999999985446688999999999999999999999999999 99999 9986
No 54
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.82 E-value=1.3e-19 Score=173.06 Aligned_cols=115 Identities=15% Similarity=0.215 Sum_probs=107.1
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~ 239 (277)
++||+|+++||++..|+..++++|+.+|++++++|++++ +|+++.|+.+.++..+++++..+||+|+||||......+.
T Consensus 534 ~rkVaILl~dGfe~~El~~p~dvL~~AG~~V~ivS~~gg-~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~~~~l~ 612 (715)
T 1sy7_A 534 SRRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRS-KVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAETLS 612 (715)
T ss_dssp TCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSS-CEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHHHH
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHhcCCEEEEEECCCC-ceecCCCceEecccccccCCcccCCEEEEcCCcccHhhhc
Confidence 479999999999999999999999999999999999998 8999999999999999988777899999999964566678
Q ss_pred cCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC-CCCC
Q 023800 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPH-GLLK 276 (277)
Q Consensus 240 ~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a-GlL~ 276 (277)
.++.+.+||+++++++|+|++||+|++ +|+++ ||.+
T Consensus 613 ~~~~l~~~Lr~~~~~gK~IaAIC~G~~-lLA~AlGL~~ 649 (715)
T 1sy7_A 613 KNGRALHWIREAFGHLKAIGATGEAVD-LVAKAIALPQ 649 (715)
T ss_dssp TCHHHHHHHHHHHHTTCEEEEETTHHH-HHHHHHCCTT
T ss_pred cCHHHHHHHHHHHhCCCEEEEECHHHH-HHHHccCcHh
Confidence 899999999999999999999999999 99999 9843
No 55
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.81 E-value=1.1e-20 Score=164.28 Aligned_cols=124 Identities=16% Similarity=0.188 Sum_probs=104.3
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeec--------------CC---CCEEecCcccccc-------ccC------CC
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDA--------------CH---GVKIVADALVSNC-------RDA------CG 50 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~--------------~~---g~~v~~d~~~~~~-------~~~------gG 50 (277)
+|++.|+++|+++||+|+++|+++ .+++. .+ |+.+.++..++++ ..+ ||
T Consensus 76 ~E~~~p~~vL~~ag~~v~i~S~~g-~~v~~d~~s~~~~~~~~~~~~~~~g~~l~~~~~l~~v~~~~~~~~~yD~livPGG 154 (291)
T 1n57_A 76 IETLLPLYHLHAAGFEFEVATISG-LMTKFEYWAMPHKDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGG 154 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSS-CCCCBCGGGCCTTCTTHHHHHHHHHHHHHSCEEHHHHHHTCCTTCSEEEEEECCS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC-CcccccccccccccHHHHHHHHhccceecCCccHHHHhhhccCcccCCEEEecCC
Confidence 389999999999999999999997 45542 22 7788888888873 222 88
Q ss_pred ccchhccccChHHHHHHHHHHhCCCEEEEEchhHHHHHHHcC----CCCCCC----------------------------
Q 023800 51 MPGATNLKESEVLESIVKKQASDGRLYAAICVFLAVALGSWG----LLKGLK---------------------------- 98 (277)
Q Consensus 51 ~~~~~~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG----ll~g~~---------------------------- 98 (277)
+...+.++.++.+++||++++++|++|+|||+|++ +|++++ ||+||+
T Consensus 155 ~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~-~La~a~~~~GLL~Gr~~Tt~~~~~e~~~~~~~~~~~~~P~~le~ 233 (291)
T 1n57_A 155 HGALIGLPESQDVAAALQWAIKNDRFVISLCHGPA-AFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWYFGE 233 (291)
T ss_dssp GGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGGGGTTSCCTTTTCEECCCCGGGGGTTTTTTSSSSCCSSCHHH
T ss_pred cchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHH-HHHhhcccCccCCCCEEEeCCCHHHhhhccccccccccchhHHH
Confidence 53333788999999999999999999999999999 888885 998865
Q ss_pred --------------------CCCeEcCCCCCCHHHHHHHHHHHhcChh
Q 023800 99 --------------------DGKVVTTRGPGTPMEFVVALVEQLYGKG 126 (277)
Q Consensus 99 --------------------dg~~iT~~g~~~~~~~a~~li~~l~g~~ 126 (277)
|||+|||+|++++++|++++|+++.|++
T Consensus 234 ~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~ 281 (291)
T 1n57_A 234 ELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAY 281 (291)
T ss_dssp HHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCch
Confidence 5689999999999999999999998864
No 56
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.80 E-value=9.8e-20 Score=158.37 Aligned_cols=115 Identities=21% Similarity=0.280 Sum_probs=100.0
Q ss_pred CCeEEEEecC--------------CCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEc--------------cc---CcE
Q 023800 160 SPQILVPIAN--------------GSEEMEAVIIIDILRRAKANVVVASVADKLEILA--------------SC---QVK 208 (277)
Q Consensus 160 ~~kV~ill~~--------------g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~--------------~~---g~~ 208 (277)
.+||+|++.+ ||++.|+..|+++|+++|++|+++|++++ ++.. .. |..
T Consensus 48 ~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g~-~v~~d~~s~~~~~~~~~~~~~~~g~~ 126 (291)
T 1n57_A 48 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGL-MTKFEYWAMPHKDEKVMPFFEQHKSL 126 (291)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSC-CCCBCGGGCCTTCTTHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCC-cccccccccccccHHHHHHHHhccce
Confidence 4799999985 79999999999999999999999999988 6652 22 778
Q ss_pred EEeCcchhhh-----ccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCC----CCC
Q 023800 209 LVADMLIDEA-----AKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHG----LLK 276 (277)
Q Consensus 209 i~~~~~~~~~-----~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aG----lL~ 276 (277)
+.++..++++ ++++||+||||||......+..++.+.+||+++++++++|++||+|++ +|+++| ||+
T Consensus 127 l~~~~~l~~v~~~~~~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~-~La~a~~~~GLL~ 202 (291)
T 1n57_A 127 FRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPA-AFLALRHGDNPLN 202 (291)
T ss_dssp HHSCEEHHHHHHTCCTTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGGGGTTSCCTTT
T ss_pred ecCCccHHHHhhhccCcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHH-HHHhhcccCccCC
Confidence 8889888884 467899999999975443678899999999999999999999999999 899875 886
No 57
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.78 E-value=4.3e-20 Score=155.78 Aligned_cols=135 Identities=26% Similarity=0.325 Sum_probs=107.2
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCc-ee---------ecCCCCEEecC-------cccccccc---C-----CCccchh
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQL-RV---------DACHGVKIVAD-------ALVSNCRD---A-----CGMPGAT 55 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~-~v---------~~~~g~~v~~d-------~~~~~~~~---~-----gG~~~~~ 55 (277)
.|++.|+++|+++||+|+++|++++. ++ ++++|+.+.++ ..+++++. + ||+....
T Consensus 25 ~E~~~p~~~l~~ag~~v~~~s~~g~~~~v~d~~s~~~~~~~~g~~i~~~~~~~~~~~~l~~~~~~~~D~livpGG~~~~~ 104 (232)
T 1vhq_A 25 HEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAK 104 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGGCCGGGCSEEEECCSTHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCCcccccccccchhhhhhhhHHHHHhhhcCCCCHHHcCcccCCEEEECCCcchHH
Confidence 38899999999999999999998732 23 77889888887 77777532 2 7754322
Q ss_pred ----------ccccChHHHHHHHHHHhCCCEEEEEchhHHHHHHHcCCCC-CCC--------------------------
Q 023800 56 ----------NLKESEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLK-GLK-------------------------- 98 (277)
Q Consensus 56 ----------~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~-g~~-------------------------- 98 (277)
.++.++.+.+||++++++|++|++||+|++ +|+++ |+ ||+
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~-~La~a--L~~Gr~~Tth~~~~~~~~l~~~g~~~~~~~~~ 181 (232)
T 1vhq_A 105 NLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPA-MLPKI--FDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVD 181 (232)
T ss_dssp TSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGG-GHHHH--CSSCCEECCCSCHHHHHHHHHTTCEECCCCTT
T ss_pred HHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHH--hcCCCEEeccCCHHHHHHHHHcCCEEecCCCC
Confidence 223589999999999999999999999999 99999 78 887
Q ss_pred ----C--CCeEcCCCCCCHHHHHHHHHHHhcChhHHHHHhhcccccccCCCc
Q 023800 99 ----D--GKVVTTRGPGTPMEFVVALVEQLYGKGKADEVSGARVMRANHGDE 144 (277)
Q Consensus 99 ----d--g~~iT~~g~~~~~~~a~~li~~l~g~~~a~~v~~~~~~~~~~~~~ 144 (277)
| ||+|||+ +++|++++++++.|++.+ +++.++|.+..+++
T Consensus 182 ~~~vd~dg~liTs~----~~d~al~lv~~~~G~~~~--~~~~~~~~~~~~~~ 227 (232)
T 1vhq_A 182 DIVVDEDNKIVTTP----AYMLAQNIAEAASGIDKL--VSRVLVLAEEGGSH 227 (232)
T ss_dssp CCEEETTTTEEEEC----GGGTCSSHHHHHHHHHHH--HHHHHHHHC-----
T ss_pred ceEEecCCCEEECC----CHHHHHHHHHHHcCHHHH--HHHHHHhhhccCCc
Confidence 3 9999996 789999999999998754 77777887777665
No 58
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.74 E-value=3.8e-19 Score=150.42 Aligned_cols=121 Identities=16% Similarity=0.106 Sum_probs=98.7
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCC----------ceeecCCCCEEecC-------cccccccc---C-----CCccchh
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQ----------LRVDACHGVKIVAD-------ALVSNCRD---A-----CGMPGAT 55 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~----------~~v~~~~g~~v~~d-------~~~~~~~~---~-----gG~~~~~ 55 (277)
+|++.|+++|+++||+|+++|++++ .+++++.|+.+.+| ..+++++. + ||.+...
T Consensus 42 ~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~~~~g~~v~~s~g~~v~~d~~~~~~~~~l~dv~~~~~D~livPGG~~~~~ 121 (242)
T 3l3b_A 42 REAVLVMLELDRHNVNFKCFAPNKNQKQVVDHKKKESVGEVRNILVESARIARGSVYDIEQIRVEEFDMLVIPGGYGVAK 121 (242)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSBCSCEEETTTTEEESCCCBHHHHHHHHTTTCEEEGGGCCGGGCSEEEECCCHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCcccccccccCccccccCCeEEecchhccccCCChHHCCcccCCEEEEcCCcchhh
Confidence 3889999999999999999999874 25778889998888 67887642 2 7754332
Q ss_pred c-----------cccChHHHHHHHHHHhCCCEEEEEchhHHHHHHHcC-CCCCCC-------------------------
Q 023800 56 N-----------LKESEVLESIVKKQASDGRLYAAICVFLAVALGSWG-LLKGLK------------------------- 98 (277)
Q Consensus 56 ~-----------~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG-ll~g~~------------------------- 98 (277)
+ ++.++.+++||++++++||+|++||+|++ +|+++| ||+||+
T Consensus 122 ~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~-~La~ag~lL~Gr~~T~~~~~~~~l~~~Ga~~~~~~~~~ 200 (242)
T 3l3b_A 122 NFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPA-VVVALLKDIAKVKVTIGEDSNGLIDKMGGVHVDCPTIK 200 (242)
T ss_dssp HHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHH-HHHHHHTTTCCCEECCCC----CHHHHTCEECCCCTTC
T ss_pred hhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHhCcccCCCEEEecCChHHHHHHCCCEEEcCCCCe
Confidence 2 36689999999999999999999999999 999999 999999
Q ss_pred ---C--CCeEcCCCCCCHHHHHHHHHHHhcChh
Q 023800 99 ---D--GKVVTTRGPGTPMEFVVALVEQLYGKG 126 (277)
Q Consensus 99 ---d--g~~iT~~g~~~~~~~a~~li~~l~g~~ 126 (277)
| ||+|||+++. ++..+.|.+.|.+
T Consensus 201 vVvD~~g~liTs~a~~----~~~~~~e~~~g~~ 229 (242)
T 3l3b_A 201 SVKDDVNRIFSCSAYM----RNDSLYNVYLGIQ 229 (242)
T ss_dssp CEEETTTTEEEECGGG----SCCCHHHHHHHHH
T ss_pred EEEECCCCEEECcCcc----cCCCHHHHHhCHH
Confidence 6 9999999775 3445666665543
No 59
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.69 E-value=1.6e-16 Score=149.70 Aligned_cols=139 Identities=15% Similarity=0.134 Sum_probs=111.0
Q ss_pred ChhHHHHHhhcccccccCCCchh-----hcccCcc--cc-ccCCCCeEEEEecCC-CchhhHHHHHHHHHhCCCeEEEEe
Q 023800 124 GKGKADEVSGARVMRANHGDEFT-----IAEFNPV--QW-TFDNSPQILVPIANG-SEEMEAVIIIDILRRAKANVVVAS 194 (277)
Q Consensus 124 g~~~a~~v~~~~~~~~~~~~~~~-----~~~~~~~--~~-~~~~~~kV~ill~~g-~~~~e~~~~~~~l~~a~~~v~~vs 194 (277)
.++.++.|++.+.........-. ...++.+ .+ ++ +++||+||+.+| ++..|+..+.++|+++|.++.++|
T Consensus 494 d~~~~~~va~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~l-~grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVs 572 (688)
T 3ej6_A 494 SNDVAKRVAVALGLEAPQPDPTYYHNNVTRGVSIFNESLPTI-ATLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIA 572 (688)
T ss_dssp CHHHHHHHHHHHTSCCCSCCTTSCCCCCCSSCCSSSSCCSCC-TTCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHhCCCCCCCCCCCCCCCCCcccccccCCCCCc-cCCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEe
Confidence 46788888888877643322111 1111111 11 12 468999999999 999999999999999999999999
Q ss_pred eCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcch-------HHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHH
Q 023800 195 VADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG-------AQAFAKSKKLVNMLKKQKESNRPYGAICASPAL 267 (277)
Q Consensus 195 ~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~-------~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~ 267 (277)
++.+ .| +|.+++++++.+||+|+||||..+ ++.++.++++++|++++++++|+|++||+|++
T Consensus 573 p~~g------~G----vD~t~~~~~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~- 641 (688)
T 3ej6_A 573 EYLA------SG----VDQTYSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKK- 641 (688)
T ss_dssp SSCC------TT----CCEETTTCCGGGCSEEEECTTCCTTTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHH-
T ss_pred CCCC------CC----cccCcccCChhcCcEEEECCCcccccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHH-
Confidence 9875 24 799999998889999999999654 25688899999999999999999999999999
Q ss_pred hhhhCCC
Q 023800 268 VLEPHGL 274 (277)
Q Consensus 268 lLa~aGl 274 (277)
+|.++|+
T Consensus 642 lL~~AGI 648 (688)
T 3ej6_A 642 ALQSIGV 648 (688)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9999997
No 60
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.65 E-value=5.1e-16 Score=146.76 Aligned_cols=142 Identities=15% Similarity=0.177 Sum_probs=112.6
Q ss_pred cChhHHHHHhhcccccccCCC-chhhc----ccCc---cccccCCCCeEEEEec--CCCchhhHHHHHHHHHhCCCeEEE
Q 023800 123 YGKGKADEVSGARVMRANHGD-EFTIA----EFNP---VQWTFDNSPQILVPIA--NGSEEMEAVIIIDILRRAKANVVV 192 (277)
Q Consensus 123 ~g~~~a~~v~~~~~~~~~~~~-~~~~~----~~~~---~~~~~~~~~kV~ill~--~g~~~~e~~~~~~~l~~a~~~v~~ 192 (277)
..++.++.|++.+........ .+... .++. ..+.+ .++||+|++. +|++..|+..+.++|+++|.++.+
T Consensus 485 ~d~~~~~~v~~~l~~~~p~~~~~~~~~~~~~~ls~~~~~~~~l-~g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~v 563 (688)
T 2iuf_A 485 ISDNLATRVASAIGVEAPKPNSSFYHDNTTAHIGAFGEKLAKL-DGLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVV 563 (688)
T ss_dssp HCHHHHHHHHTTTTCCCCCCCGGGCCCCCCTTCSSSSSCCSCC-TTCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred hCHHHHHHHHHHhCCCCCCCCccCCCCCCCcccccCcCCCCCC-CCCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEE
Confidence 346788889988876432221 11000 1111 11122 3589999999 999999999999999999999999
Q ss_pred EeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcch----------------HHhhhcCHHHHHHHHHHHHcCC
Q 023800 193 ASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG----------------AQAFAKSKKLVNMLKKQKESNR 256 (277)
Q Consensus 193 vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~----------------~~~~~~~~~~~~~l~~~~~~~~ 256 (277)
+|++.+ . .+|.++++++..+||+|+||||..+ .+.++.++++++||++++++||
T Consensus 564 Vs~~~g-~---------~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gK 633 (688)
T 2iuf_A 564 VAERXA-N---------NVDETYSASDAVQFDAVVVADGAEGLFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGK 633 (688)
T ss_dssp EESSCC-T---------TCCEESTTCCGGGCSEEEECTTCGGGCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTC
T ss_pred EeccCC-c---------ccccchhcCCccccCeEEecCCCcccccccccccccccccchhhcccChHHHHHHHHHHHcCC
Confidence 999765 2 7788899888889999999999755 5668889999999999999999
Q ss_pred cEEEEchhhHHhhhhCCCCC
Q 023800 257 PYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 257 ~i~aiC~G~~~lLa~aGlL~ 276 (277)
+|++||+|++ +|.++||..
T Consensus 634 pIaAIc~ap~-vL~~aGi~~ 652 (688)
T 2iuf_A 634 TVGALGSGSD-ALESGQISS 652 (688)
T ss_dssp EEEEEGGGHH-HHHHTTCCT
T ss_pred EEEEECchHH-HHHHcCCCC
Confidence 9999999999 999999863
No 61
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.64 E-value=5.6e-16 Score=148.06 Aligned_cols=121 Identities=12% Similarity=0.060 Sum_probs=105.8
Q ss_pred chhhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCcccccccc---C-----CCccchhccccChHHHHHHHHHHhC
Q 023800 2 EAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD---A-----CGMPGATNLKESEVLESIVKKQASD 73 (277)
Q Consensus 2 E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~---~-----gG~~~~~~~~~~~~~~~~l~~~~~~ 73 (277)
|+..|+++|+++||+|.++|+++ .+|+++.|+.+.+|..+++++. + ||..+.+.+..++.+++||++++++
T Consensus 549 El~~p~dvL~~AG~~V~ivS~~g-g~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~~~~l~~~~~l~~~Lr~~~~~ 627 (715)
T 1sy7_A 549 AYDAAYAAISANQAIPLVIGPRR-SKVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAETLSKNGRALHWIREAFGH 627 (715)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCS-SCEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCEEEEEECCC-CceecCCCceEecccccccCCcccCCEEEEcCCcccHhhhccCHHHHHHHHHHHhC
Confidence 78899999999999999999997 5899999999999999988642 2 7754566788899999999999999
Q ss_pred CCEEEEEchhHHHHHHHc-CCCCCCC--------CCCeEcCCCCC------------CHHHHHHHHHHHhcC
Q 023800 74 GRLYAAICVFLAVALGSW-GLLKGLK--------DGKVVTTRGPG------------TPMEFVVALVEQLYG 124 (277)
Q Consensus 74 g~~i~aiC~g~~~~La~a-Gll~g~~--------dg~~iT~~g~~------------~~~~~a~~li~~l~g 124 (277)
||+|++||+|++ +|+++ ||.+-+. |||+||++|+. +..+|+..+++.+..
T Consensus 628 gK~IaAIC~G~~-lLA~AlGL~~L~~aGa~~VVvDg~lITs~gp~~~~l~~~~~i~~s~~~fa~~fi~~L~~ 698 (715)
T 1sy7_A 628 LKAIGATGEAVD-LVAKAIALPQVTVSSEAEVHESYGVVTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIAQ 698 (715)
T ss_dssp TCEEEEETTHHH-HHHHHHCCTTSCCCCSSSCEEETTEEEESSCCTTTTTSCCCCSTTCSSHHHHHHHHHHT
T ss_pred CCEEEEECHHHH-HHHHccCcHhHHhcCCCcEEEeCCEEECCCCcccccccccccccCHHHHHHHHHHHHHc
Confidence 999999999999 99999 9865332 99999999996 667899999998864
No 62
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.44 E-value=3.8e-13 Score=127.72 Aligned_cols=116 Identities=10% Similarity=0.101 Sum_probs=96.7
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCcccccccc---C-----CCccchhccccChHHHHHHHHHHh
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD---A-----CGMPGATNLKESEVLESIVKKQAS 72 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~---~-----gG~~~~~~~~~~~~~~~~l~~~~~ 72 (277)
+|++.|+++|+++|++|.++|+++ .+|++++|..+.+|.++++++. + || +...++.++.+++||+++++
T Consensus 614 ~El~~pvdaLr~AG~~V~vVS~~~-g~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG--g~~~Lr~d~~vl~~Vre~~~ 690 (753)
T 3ttv_A 614 ADLLAILKALKAKGVHAKLLYSRM-GEVTADDGTVLPIAATFAGAPSLTVDAVIVPCG--NIADIADNGDANYYLMEAYK 690 (753)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSS-SEEECTTSCEEECCEETTTSCGGGCSEEEECCS--CGGGTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEcCC-CeEEeCCCCEEecccchhhCCCcCCCEEEECCC--ChHHhhhCHHHHHHHHHHHh
Confidence 488999999999999999999997 5899999999999999998764 2 77 67788999999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCCCCCeEcCCCCCCHHHHHHHHHHHhc
Q 023800 73 DGRLYAAICVFLAVALGSWGLLKGLKDGKVVTTRGPGTPMEFVVALVEQLY 123 (277)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~dg~~iT~~g~~~~~~~a~~li~~l~ 123 (277)
++|+|+|||+|++ +|+++||-. ..|..++++.... -+++-.+++.+.
T Consensus 691 ~gKpIAAIC~Gp~-lLa~AGL~~-~~~~g~~~~~~~~--~~~~~~~~~~~~ 737 (753)
T 3ttv_A 691 HLKPIALAGDARK-FKATIKIAD-QGEEGIVEADSAD--GSFMDELLTLMA 737 (753)
T ss_dssp TTCCEEEEGGGGG-GGGGGTCCT-TCBTTEEEESSCC--HHHHHHHHHHHH
T ss_pred cCCeEEEECchHH-HHHHcCCCC-CCCCcEEEcCcch--HHHHHHHHHHHH
Confidence 9999999999999 999999844 2345688765432 345666666554
No 63
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.22 E-value=3.8e-11 Score=113.70 Aligned_cols=108 Identities=20% Similarity=0.111 Sum_probs=89.4
Q ss_pred CchhhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC--------CCccc----------------hhc
Q 023800 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA--------CGMPG----------------ATN 56 (277)
Q Consensus 1 ~E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~--------gG~~~----------------~~~ 56 (277)
+|+..|++.|+++|++|.++|+..+. .+|.++++.+.. ||..+ +..
T Consensus 545 ~E~~~~~~~L~~aG~~V~vVs~~~g~----------~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~ 614 (688)
T 2iuf_A 545 AQGAKLQVALSSVGVDVVVVAERXAN----------NVDETYSASDAVQFDAVVVADGAEGLFGADSFTVEPSAGSGAST 614 (688)
T ss_dssp HHHHHHHHHHGGGTCEEEEEESSCCT----------TCCEESTTCCGGGCSEEEECTTCGGGCCTTTTTCCCCTTSCCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEeccCCc----------ccccchhcCCccccCeEEecCCCcccccccccccccccccchhh
Confidence 38899999999999999999997531 677777775432 77656 677
Q ss_pred cccChHHHHHHHHHHhCCCEEEEEchhHHHHHHHcCCCCCCCCCCeEcCCCCCCHHHHHHHHHHHhc
Q 023800 57 LKESEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLKGLKDGKVVTTRGPGTPMEFVVALVEQLY 123 (277)
Q Consensus 57 ~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~dg~~iT~~g~~~~~~~a~~li~~l~ 123 (277)
++.++.+++||+++++.||+|+|||+|++ +|.++|+.. .|.++||++.+ .-+|+..+++.+.
T Consensus 615 L~~~~~~~~~v~~~~~~gKpIaAIc~ap~-vL~~aGi~~--~d~GVvts~~~--~~~f~~~fi~~la 676 (688)
T 2iuf_A 615 LYPAGRPLNILLDAFRFGKTVGALGSGSD-ALESGQISS--ERQGVYTGKNA--GDAFAKDIKSGLS 676 (688)
T ss_dssp SSCTTHHHHHHHHHHHHTCEEEEEGGGHH-HHHHTTCCT--TSTTEEEESSS--SHHHHHHHHHHHH
T ss_pred cccChHHHHHHHHHHHcCCEEEEECchHH-HHHHcCCCC--CCCCEEEcCCc--cHHHHHHHHHHHH
Confidence 89999999999999999999999999999 999999964 46889999888 3456677776653
No 64
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.21 E-value=1.7e-11 Score=101.41 Aligned_cols=93 Identities=26% Similarity=0.337 Sum_probs=73.6
Q ss_pred CCCeEEEEecCCCch-hhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 159 NSPQILVPIANGSEE-MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 159 ~~~kV~ill~~g~~~-~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
|++||+|+.+++++. .+ +.++|+++|+++.+++.. + +..++|.|+||||....+.
T Consensus 1 m~~~i~il~~~~~~~~~~---~~~~l~~~g~~~~~~~~~-------------------~--~~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 1 MKPRACVVVYPGSNCDRD---AYHALEINGFEPSYVGLD-------------------D--KLDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CCCEEEEECCTTEEEHHH---HHHHHHTTTCEEEEECTT-------------------C--CCSSCSEEEECEECGGGGC
T ss_pred CCcEEEEEEcCCCCccHH---HHHHHHHCCCEEEEEecC-------------------C--CcccCCEEEECCCCchhhh
Confidence 357999999999874 44 489999999999888642 1 1246899999998532222
Q ss_pred -----hhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCCC
Q 023800 238 -----FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 276 (277)
Q Consensus 238 -----~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL~ 276 (277)
...++.+.+||+++.+++++|.+||.|.+ +|+++|+|+
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~q-lLa~aGll~ 99 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQ-ILIEMGLLK 99 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHH-HHHHHTSSC
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHH-HHHHcCCCC
Confidence 12356789999999999999999999999 899999985
No 65
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.01 E-value=1.9e-09 Score=101.94 Aligned_cols=104 Identities=22% Similarity=0.177 Sum_probs=81.4
Q ss_pred chhhHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC--------CCccc-------hhccccChHHHHH
Q 023800 2 EAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA--------CGMPG-------ATNLKESEVLESI 66 (277)
Q Consensus 2 E~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~--------gG~~~-------~~~~~~~~~~~~~ 66 (277)
|+..|++.|+++|++|.++|+..+ .| +|.++++++.. ||..+ ++.++.++.+++|
T Consensus 553 El~~p~~aL~~aGa~V~vVsp~~g------~G----vD~t~~~~~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~f 622 (688)
T 3ej6_A 553 KAKALKEQLEKDGLKVTVIAEYLA------SG----VDQTYSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAGRPSQI 622 (688)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCC------TT----CCEETTTCCGGGCSEEEECTTCCTTTSTTTTCCTTSCTTHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCC------CC----cccCcccCChhcCcEEEECCCcccccccccchhhhccCHHHHHH
Confidence 789999999999999999999863 24 78888876532 77544 2678999999999
Q ss_pred HHHHHhCCCEEEEEchhHHHHHHHcCCCCCCCCCCeEcCCCCCCHHHHHHHHHHHh
Q 023800 67 VKKQASDGRLYAAICVFLAVALGSWGLLKGLKDGKVVTTRGPGTPMEFVVALVEQL 122 (277)
Q Consensus 67 l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~dg~~iT~~g~~~~~~~a~~li~~l 122 (277)
++++++.+|+|++||+|++ +|.++|+-. .|..+++. ...+++-.+++.+
T Consensus 623 V~e~~~hgKpIAAIchgp~-lL~~AGI~~--~~~g~~~~----~~~~~~~~~~~~~ 671 (688)
T 3ej6_A 623 LTDGYRWGKPVAAVGSAKK-ALQSIGVEE--KEAGVYAG----AQDEVIKGVEEGL 671 (688)
T ss_dssp HHHHHHTTCCEEEEGGGHH-HHHHTTCCS--SSTTEEEE----CHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEeCccHH-HHHHcCCCC--CCCeEEec----CcHHHHHHHHHHH
Confidence 9999999999999999999 999999843 24457762 2344555555443
No 66
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=98.46 E-value=5.4e-07 Score=73.23 Aligned_cols=86 Identities=20% Similarity=0.253 Sum_probs=61.3
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH-hhh
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ-AFA 239 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~-~~~ 239 (277)
+||+|+-+.+ +..+ ..+.|+++|.++.+++.. +++ .++|.|++|||..... .++
T Consensus 2 m~I~il~~~~-~~~~---~~~~l~~~g~~~~~~~~~-------------------~~l--~~~d~iil~GG~~~~~~~~~ 56 (196)
T 2nv0_A 2 LTIGVLGLQG-AVRE---HIHAIEACGAAGLVVKRP-------------------EQL--NEVDGLILPGGESTTMRRLI 56 (196)
T ss_dssp CEEEEECSSS-CCHH---HHHHHHHTTCEEEEECSG-------------------GGG--GGCSEEEECCSCHHHHHHHH
T ss_pred cEEEEEEccC-CcHH---HHHHHHHCCCEEEEeCCh-------------------HHH--hhCCEEEECCCChhhHHHHh
Confidence 6899986522 2222 358899999988777431 122 3689999999964322 223
Q ss_pred cCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 240 ~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
.+..+.++|+++.+++++|.+||.|.. +|+++
T Consensus 57 ~~~~~~~~i~~~~~~~~pilgIC~G~q-~l~~~ 88 (196)
T 2nv0_A 57 DTYQFMEPLREFAAQGKPMFGTCAGLI-ILAKE 88 (196)
T ss_dssp HHTTCHHHHHHHHHTTCCEEEETHHHH-HHSBC
T ss_pred hhHHHHHHHHHHHHCCCcEEEECHHHH-HHHHH
Confidence 334568899999999999999999999 89874
No 67
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=98.41 E-value=5.1e-07 Score=74.81 Aligned_cols=87 Identities=21% Similarity=0.262 Sum_probs=62.9
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH-hh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ-AF 238 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~-~~ 238 (277)
.++|+|+.+++ .+...++.|+++|.++.+++.. +++ +++|.|++|||..... .+
T Consensus 23 ~~~I~il~~~~----~~~~~~~~l~~~G~~~~~~~~~-------------------~~l--~~~Dglil~GG~~~~~~~~ 77 (219)
T 1q7r_A 23 NMKIGVLGLQG----AVREHVRAIEACGAEAVIVKKS-------------------EQL--EGLDGLVLPGGESTTMRRL 77 (219)
T ss_dssp CCEEEEESCGG----GCHHHHHHHHHTTCEEEEECSG-------------------GGG--TTCSEEEECCCCHHHHHHH
T ss_pred CCEEEEEeCCC----CcHHHHHHHHHCCCEEEEECCH-------------------HHH--hhCCEEEECCCChHHHHHH
Confidence 46899997654 1223468999999988887531 122 4689999999964222 22
Q ss_pred hcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
..+..+.++|+++.+++++|.+||.|.. +|+.+
T Consensus 78 ~~~~~~~~~i~~~~~~~~PilGIC~G~Q-lL~~~ 110 (219)
T 1q7r_A 78 IDRYGLMEPLKQFAAAGKPMFGTCAGLI-LLAKR 110 (219)
T ss_dssp HHHTTCHHHHHHHHHTTCCEEEETTHHH-HHEEE
T ss_pred hhhhHHHHHHHHHHHcCCeEEEECHHHH-HHHHH
Confidence 2244567899999999999999999999 89863
No 68
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=98.37 E-value=7e-07 Score=73.35 Aligned_cols=88 Identities=18% Similarity=0.251 Sum_probs=62.6
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH-h
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ-A 237 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~-~ 237 (277)
+.+||+|+-+++ .+....+.|+++|.++.+++.. +++ .++|.|++|||..... .
T Consensus 19 ~~~~I~ii~~~~----~~~~~~~~l~~~g~~~~~~~~~-------------------~~l--~~~d~iil~GG~~~~~~~ 73 (208)
T 2iss_D 19 SHMKIGVLGVQG----DVREHVEALHKLGVETLIVKLP-------------------EQL--DMVDGLILPGGESTTMIR 73 (208)
T ss_dssp -CCEEEEECSSS----CHHHHHHHHHHTTCEEEEECSG-------------------GGG--GGCSEEEECSSCHHHHHH
T ss_pred CCcEEEEEECCC----chHHHHHHHHHCCCEEEEeCCh-------------------HHH--hhCCEEEECCCcHHHHHh
Confidence 347899996643 4455678888899988777421 112 3589999999953221 1
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
+..+..+.++|+++.+++++|.+||.|.. +|+++
T Consensus 74 ~~~~~~~~~~i~~~~~~g~PilGIC~G~Q-lL~~~ 107 (208)
T 2iss_D 74 ILKEMDMDEKLVERINNGLPVFATCAGVI-LLAKR 107 (208)
T ss_dssp HHHHTTCHHHHHHHHHTTCCEEEETHHHH-HHEEE
T ss_pred hhhhhhHHHHHHHHHHCCCeEEEECHHHH-HHHHH
Confidence 22233467899999999999999999999 89874
No 69
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=98.36 E-value=1.6e-06 Score=70.69 Aligned_cols=88 Identities=24% Similarity=0.228 Sum_probs=61.0
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~ 239 (277)
++||+|+-+. +.. +....+.|+++|.++.+++.. ++ .+++|.|++||+........
T Consensus 2 ~~~I~iid~~-~~~--~~~~~~~l~~~G~~~~~~~~~-------------------~~--l~~~d~lil~G~g~~~~~~~ 57 (200)
T 1ka9_H 2 RMKALLIDYG-SGN--LRSAAKALEAAGFSVAVAQDP-------------------KA--HEEADLLVLPGQGHFGQVMR 57 (200)
T ss_dssp -CEEEEECSS-CSC--HHHHHHHHHHTTCEEEEESST-------------------TS--CSSCSEEEECCCSCHHHHHH
T ss_pred ccEEEEEeCC-Ccc--HHHHHHHHHHCCCeEEEecCh-------------------HH--cccCCEEEECCCCcHHHHHH
Confidence 4689888543 222 233579999999998877421 11 23689999999422222222
Q ss_pred c--CHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 240 K--SKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 240 ~--~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
. +..+.++|+++.+++++|.+||.|.. +|+++
T Consensus 58 ~l~~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~~ 91 (200)
T 1ka9_H 58 AFQESGFVERVRRHLERGLPFLGICVGMQ-VLYEG 91 (200)
T ss_dssp TTSSSCTHHHHHHHHHTTCCEEECTHHHH-TTSSE
T ss_pred HHHhcCHHHHHHHHHHcCCeEEEEcHHHH-HHHHh
Confidence 1 24578899999999999999999999 89987
No 70
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=98.31 E-value=2.4e-06 Score=71.60 Aligned_cols=94 Identities=16% Similarity=0.211 Sum_probs=67.4
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhc
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~ 240 (277)
+||+++..+.++.... ..+.++..|++++++....+.+ + |+ + ..++|+|||+||...+.....
T Consensus 1 m~i~vi~h~~~e~~g~--~~~~l~~~g~~~~~~~~~~~~~--------~-p~----~--~~~~d~lii~GGp~~~~~~~~ 63 (236)
T 3l7n_A 1 MRIHFILHETFEAPGA--YLAWAALRGHDVSMTKVYRYEK--------L-PK----D--IDDFDMLILMGGPQSPSSTKK 63 (236)
T ss_dssp CEEEEEECCTTSCCHH--HHHHHHHTTCEEEEEEGGGTCC--------C-CS----C--GGGCSEEEECCCSSCTTCCTT
T ss_pred CeEEEEeCCCCCCchH--HHHHHHHCCCeEEEEeeeCCCC--------C-CC----C--ccccCEEEECCCCCCcccccc
Confidence 4889998877766553 4467889999999997754310 1 11 1 246899999999643221111
Q ss_pred ----C--HHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 241 ----S--KKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 241 ----~--~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
. ....++|+++.+.+++|.+||-|.. +|+.+
T Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~Q-lL~~~ 100 (236)
T 3l7n_A 64 EFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQ-LMGVA 100 (236)
T ss_dssp TCTTCCHHHHHHHHHHHHHTTCEEEEETHHHH-HHHHH
T ss_pred cCcccchHHHHHHHHHHHHcCCCEEEEchHHH-HHHHH
Confidence 1 3478999999999999999999999 88863
No 71
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.31 E-value=1e-06 Score=71.22 Aligned_cols=87 Identities=15% Similarity=0.174 Sum_probs=63.3
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcc-hHHhh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLG-GAQAF 238 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~-~~~~~ 238 (277)
.++|+|+..++ .+....+.|+++|.++.+++.. +++ +++|.|++|||.. ....+
T Consensus 2 ~p~Igi~~~~~----~~~~~~~~l~~~G~~~~~~~~~-------------------~~l--~~~dglil~GG~~~~~~~~ 56 (191)
T 2ywd_A 2 RGVVGVLALQG----DFREHKEALKRLGIEAKEVRKK-------------------EHL--EGLKALIVPGGESTTIGKL 56 (191)
T ss_dssp -CCEEEECSSS----CHHHHHHHHHTTTCCCEEECSG-------------------GGG--TTCSEEEECSSCHHHHHHH
T ss_pred CcEEEEEecCC----chHHHHHHHHHCCCEEEEeCCh-------------------hhh--ccCCEEEECCCChhhhHHh
Confidence 36799998765 3446789999999888776421 112 3589999999942 22323
Q ss_pred hcCHHHHHHHHHHHHcC-CcEEEEchhhHHhhhhC
Q 023800 239 AKSKKLVNMLKKQKESN-RPYGAICASPALVLEPH 272 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~-~~i~aiC~G~~~lLa~a 272 (277)
..+..+.++|+++.+++ ++|.+||.|.. +|+.+
T Consensus 57 ~~~~~~~~~i~~~~~~~~~PilGiC~G~Q-~l~~~ 90 (191)
T 2ywd_A 57 AREYGIEDEVRKRVEEGSLALFGTCAGAI-WLAKE 90 (191)
T ss_dssp HHHTTHHHHHHHHHHTTCCEEEEETHHHH-HHEEE
T ss_pred hhhhhHHHHHHHHHHCCCCeEEEECHHHH-HHHHH
Confidence 32356788999999999 99999999999 89874
No 72
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=98.28 E-value=2.2e-06 Score=72.41 Aligned_cols=95 Identities=14% Similarity=0.125 Sum_probs=68.0
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH-hh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ-AF 238 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~-~~ 238 (277)
+++|+|+..+.++..+.. .++|++.|++++++....+.+. + .+ ..++|.||||||..... ..
T Consensus 3 ~~~vliiqh~~~e~~~~i--~~~l~~~G~~v~v~~~~~~~~~---------p----~~--~~~~d~lIl~GGp~~~~d~~ 65 (250)
T 3m3p_A 3 LKPVMIIQFSASEGPGHF--GDFLAGEHIPFQVLRMDRSDPL---------P----AE--IRDCSGLAMMGGPMSANDDL 65 (250)
T ss_dssp CCCEEEEESSSSCCCHHH--HHHHHHTTCCEEEEEGGGTCCC---------C----SC--GGGSSEEEECCCSSCTTSCC
T ss_pred CCeEEEEECCCCCCHHHH--HHHHHHCCCeEEEEeccCCCcC---------c----Cc--cccCCEEEECCCCCcccccc
Confidence 468999987777766644 4568999999999876543110 1 11 24689999999853222 12
Q ss_pred hcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
.......++|+++.+.+++|.+||.|.. +|+.+
T Consensus 66 ~~~~~~~~~i~~~~~~~~PvlGIC~G~Q-ll~~~ 98 (250)
T 3m3p_A 66 PWMPTLLALIRDAVAQRVPVIGHCLGGQ-LLAKA 98 (250)
T ss_dssp TTHHHHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred hHHHHHHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 2235678899999999999999999999 78763
No 73
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=98.03 E-value=1.4e-05 Score=64.31 Aligned_cols=85 Identities=18% Similarity=0.240 Sum_probs=60.7
Q ss_pred EEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCH
Q 023800 163 ILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSK 242 (277)
Q Consensus 163 V~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~ 242 (277)
|+|+=+.+.. ...+.+.|+++|.++.++..+. .++++...++|.|++|||. .+. ...
T Consensus 3 i~iid~~~~~---~~~~~~~l~~~G~~~~~~~~~~----------------~~~~~~~~~~dglil~Gg~-~~~---~~~ 59 (189)
T 1wl8_A 3 IVIMDNGGQY---VHRIWRTLRYLGVETKIIPNTT----------------PLEEIKAMNPKGIIFSGGP-SLE---NTG 59 (189)
T ss_dssp EEEEECSCTT---HHHHHHHHHHTTCEEEEEETTC----------------CHHHHHHTCCSEEEECCCS-CTT---CCT
T ss_pred EEEEECCCch---HHHHHHHHHHCCCeEEEEECCC----------------ChHHhcccCCCEEEECCCC-Chh---hhh
Confidence 6666544333 3477789999999998876532 2233322469999999995 332 244
Q ss_pred HHHHHHHHHHHcCCcEEEEchhhHHhhhh
Q 023800 243 KLVNMLKKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 243 ~~~~~l~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
...++++++.+.++++.+||.|.. +|+.
T Consensus 60 ~~~~~i~~~~~~~~PilGIC~G~Q-~l~~ 87 (189)
T 1wl8_A 60 NCEKVLEHYDEFNVPILGICLGHQ-LIAK 87 (189)
T ss_dssp THHHHHHTGGGTCSCEEEETHHHH-HHHH
T ss_pred hHHHHHHHHhhCCCeEEEEcHHHH-HHHH
Confidence 568888877789999999999999 8886
No 74
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.00 E-value=1.7e-05 Score=80.76 Aligned_cols=99 Identities=13% Similarity=0.203 Sum_probs=70.9
Q ss_pred CCCeEEEEecCCCch-hhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH-
Q 023800 159 NSPQILVPIANGSEE-MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ- 236 (277)
Q Consensus 159 ~~~kV~ill~~g~~~-~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~- 236 (277)
..+||+|+.++|.+- .|+ ..+|+++|+++.++..+. +..+. .+ ..++|.|++|||....+
T Consensus 1046 ~~pkVaIi~~~G~N~~~~~---~~A~~~aG~~~~~v~~~d-----------l~~~~--~~--l~~~d~lvlPGGfSygD~ 1107 (1303)
T 3ugj_A 1046 ARPKVAVLREQGVNSHVEM---AAAFHRAGFDAIDVHMSD-----------LLGGR--IG--LGNFHALVACGGFSYGDV 1107 (1303)
T ss_dssp CCCEEEEEECTTCCCHHHH---HHHHHHTTCEEEEEEHHH-----------HHTTS--CC--GGGCSEEEECCSCGGGGT
T ss_pred CCCEEEEEecCCcCCHHHH---HHHHHHhCCceEEEeecc-----------cccCc--cc--HhhCCEEEECCCCcchhh
Confidence 357999999999875 664 457778999988775320 00000 11 24689999999864222
Q ss_pred ---------hhhcCHHHHHHHHHHH-HcCCcEEEEchhhHHhhhhC-CCCC
Q 023800 237 ---------AFAKSKKLVNMLKKQK-ESNRPYGAICASPALVLEPH-GLLK 276 (277)
Q Consensus 237 ---------~~~~~~~~~~~l~~~~-~~~~~i~aiC~G~~~lLa~a-GlL~ 276 (277)
....++.+.+.+++++ ++++++.+||.|.+ +|.++ |||.
T Consensus 1108 l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~Q-lL~e~~gllP 1157 (1303)
T 3ugj_A 1108 LGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQ-MMSNLRELIP 1157 (1303)
T ss_dssp TSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHH-HHHTTGGGST
T ss_pred hccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHH-HHHHhcCcCC
Confidence 1345677888899866 68999999999999 89999 9873
No 75
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=97.99 E-value=4.9e-06 Score=68.27 Aligned_cols=76 Identities=21% Similarity=0.261 Sum_probs=54.5
Q ss_pred hHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC---CCccchhc-----cccChHHHHHHHHHHhCCCE
Q 023800 5 ITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGATN-----LKESEVLESIVKKQASDGRL 76 (277)
Q Consensus 5 ~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~---gG~~~~~~-----~~~~~~~~~~l~~~~~~g~~ 76 (277)
.+.+.|+++|+++.+++... .+++++.. ||....+. +..++.+.+||+++.+++++
T Consensus 18 ~~~~~l~~~g~~~~~~~~~~----------------~~~~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 81 (213)
T 3d54_D 18 DAYHALEINGFEPSYVGLDD----------------KLDDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKL 81 (213)
T ss_dssp HHHHHHHTTTCEEEEECTTC----------------CCSSCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCE
T ss_pred HHHHHHHHCCCEEEEEecCC----------------CcccCCEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCE
Confidence 45889999999999887531 11222211 44211221 22457789999999999999
Q ss_pred EEEEchhHHHHHHHcCCCCCC
Q 023800 77 YAAICVFLAVALGSWGLLKGL 97 (277)
Q Consensus 77 i~aiC~g~~~~La~aGll~g~ 97 (277)
|.+||.|.+ +|+.+|+|+|+
T Consensus 82 ilgIC~G~q-lLa~aGll~g~ 101 (213)
T 3d54_D 82 IMGICNGFQ-ILIEMGLLKGA 101 (213)
T ss_dssp EEECHHHHH-HHHHHTSSCSE
T ss_pred EEEECHHHH-HHHHcCCCCCC
Confidence 999999999 99999999973
No 76
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=97.98 E-value=9.4e-06 Score=67.40 Aligned_cols=86 Identities=20% Similarity=0.204 Sum_probs=60.4
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhC---CCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH-
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRA---KANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ- 236 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a---~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~- 236 (277)
++|+|+.+++. +....++|+++ |.++..++. .+++ .++|.||+|||.....
T Consensus 4 ~~I~Il~~~~~----~~~~~~~l~~~~~~G~~~~~~~~-------------------~~~l--~~~dglil~GG~~~~~~ 58 (227)
T 2abw_A 4 ITIGVLSLQGD----FEPHINHFIKLQIPSLNIIQVRN-------------------VHDL--GLCDGLVIPGGESTTVR 58 (227)
T ss_dssp EEEEEECTTSC----CHHHHHHHHTTCCTTEEEEEECS-------------------HHHH--HTCSEEEECCSCHHHHH
T ss_pred cEEEEEeCCCC----cHHHHHHHHHhccCCeEEEEEcC-------------------cccc--ccCCEEEECCCcHHHHH
Confidence 57999877653 22457888888 766555421 0222 3589999999963222
Q ss_pred hhhcC--HHHHHHHHHHHHc-CCcEEEEchhhHHhhhhC
Q 023800 237 AFAKS--KKLVNMLKKQKES-NRPYGAICASPALVLEPH 272 (277)
Q Consensus 237 ~~~~~--~~~~~~l~~~~~~-~~~i~aiC~G~~~lLa~a 272 (277)
.+..+ ..+.++|+++.+. +++|.+||.|.. +|+++
T Consensus 59 ~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~Q-lL~~~ 96 (227)
T 2abw_A 59 RCCAYENDTLYNALVHFIHVLKKPIWGTCAGCI-LLSKN 96 (227)
T ss_dssp HHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHH-HTEEE
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHH-HHHHH
Confidence 22222 5688999999999 999999999999 89874
No 77
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=97.92 E-value=2.7e-05 Score=63.10 Aligned_cols=90 Identities=13% Similarity=0.161 Sum_probs=58.7
Q ss_pred EEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCH
Q 023800 163 ILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSK 242 (277)
Q Consensus 163 V~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~ 242 (277)
|+|+=..+.. ...+.+.|+++|.++.++..+. ..++++...++|.|+++||........+.+
T Consensus 4 i~iid~~~s~---~~~~~~~l~~~G~~~~v~~~~~---------------~~~~~~~~~~~dglil~gG~~~~~~~~~~~ 65 (195)
T 1qdl_B 4 TLIIDNYDSF---VYNIAQIVGELGSYPIVIRNDE---------------ISIKGIERIDPDRLIISPGPGTPEKREDIG 65 (195)
T ss_dssp EEEEECSCSS---HHHHHHHHHHTTCEEEEEETTT---------------SCHHHHHHHCCSEEEECCCSSCTTSHHHHT
T ss_pred EEEEECCCch---HHHHHHHHHhCCCEEEEEeCCC---------------CCHHHHhhCCCCEEEECCCCCChhhhhhhh
Confidence 6666533322 2467789999999998886542 123333323689999987743332211122
Q ss_pred HHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 243 KLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 243 ~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
...++++++ +.++++.+||-|.. +|+.+
T Consensus 66 ~~~~~i~~~-~~~~PvLGIC~G~Q-lL~~~ 93 (195)
T 1qdl_B 66 VSLDVIKYL-GKRTPILGVCLGHQ-AIGYA 93 (195)
T ss_dssp THHHHHHHH-TTTSCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHh-cCCCcEEEEehHHH-HHHHH
Confidence 345788874 78999999999999 88863
No 78
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=97.85 E-value=4.3e-05 Score=62.05 Aligned_cols=86 Identities=17% Similarity=0.264 Sum_probs=57.5
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCC-----CeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchH
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAK-----ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~-----~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~ 235 (277)
+||+|+-++.-+..+ ..+.|++.| .++.++.. . + + .++|.|++||+....
T Consensus 1 m~I~iid~~~g~~~s---~~~~l~~~G~~~~~~~~~~~~~--~-------------~----~---~~~dglilpG~g~~~ 55 (201)
T 1gpw_B 1 MRIGIISVGPGNIMN---LYRGVKRASENFEDVSIELVES--P-------------R----N---DLYDLLFIPGVGHFG 55 (201)
T ss_dssp CEEEEECCSSSCCHH---HHHHHHHHSTTBSSCEEEEECS--C-------------C----S---SCCSEEEECCCSCSH
T ss_pred CEEEEEecCCchHHH---HHHHHHHcCCCCCceEEEEECC--C-------------c----c---cCCCEEEECCCCcHH
Confidence 478888665323333 336777888 77777642 1 1 1 358999999952211
Q ss_pred HhhhcC--HHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 236 QAFAKS--KKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 236 ~~~~~~--~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
+..... ..+.++|+++.+++++|.+||.|.. +|+.+
T Consensus 56 ~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~~ 93 (201)
T 1gpw_B 56 EGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQ-LLFEE 93 (201)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHH-TTSSE
T ss_pred HHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHH-HHHHh
Confidence 111111 1377899999999999999999999 89875
No 79
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=97.81 E-value=4.8e-05 Score=61.00 Aligned_cols=83 Identities=22% Similarity=0.271 Sum_probs=55.2
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh-hh
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA-FA 239 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~-~~ 239 (277)
+||+|+-.+| .+....+.|+++|.++.++... ++ ..++|.|++|||...... +.
T Consensus 1 m~i~vl~~~g----~~~~~~~~l~~~G~~~~~~~~~-------------------~~--~~~~dglil~GG~~~~~~~~~ 55 (186)
T 2ywj_A 1 MIIGVLAIQG----DVEEHEEAIKKAGYEAKKVKRV-------------------ED--LEGIDALIIPGGESTAIGKLM 55 (186)
T ss_dssp CEEEEECSSS----CCHHHHHHHHHTTSEEEEECSG-------------------GG--GTTCSEEEECCSCHHHHHHHH
T ss_pred CEEEEEecCc----chHHHHHHHHHCCCEEEEECCh-------------------HH--hccCCEEEECCCCchhhhhhh
Confidence 4788886544 2233468999999988776420 12 246899999999532211 11
Q ss_pred cCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 240 ~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
....+.++++ +++++|.+||.|.. +|+.+
T Consensus 56 ~~~~~~~~i~---~~~~PilGIC~G~Q-ll~~~ 84 (186)
T 2ywj_A 56 KKYGLLEKIK---NSNLPILGTCAGMV-LLSKG 84 (186)
T ss_dssp HHTTHHHHHH---TCCCCEEEETHHHH-HHSSC
T ss_pred hccCHHHHHH---hcCCcEEEECHHHH-HHHHH
Confidence 1223555655 78999999999999 89875
No 80
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=97.70 E-value=2.2e-05 Score=64.30 Aligned_cols=88 Identities=16% Similarity=0.166 Sum_probs=56.3
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
|++||+|+=|-.-+ +.....+|++.|+++.++.. .+++ .++|.||+||+.. +...
T Consensus 1 M~~~I~iiD~g~~n---~~si~~al~~~G~~~~v~~~-------------------~~~l--~~~D~lilPG~g~-~~~~ 55 (211)
T 4gud_A 1 MTQNVVIIDTGCAN---ISSVKFAIERLGYAVTISRD-------------------PQVV--LAADKLFLPGVGT-ASEA 55 (211)
T ss_dssp --CCEEEECCCCTT---HHHHHHHHHHTTCCEEEECC-------------------HHHH--HHCSEEEECCCSC-HHHH
T ss_pred CCCEEEEEECCCCh---HHHHHHHHHHCCCEEEEECC-------------------HHHH--hCCCEEEECCCCC-HHHH
Confidence 34688887443222 34566788999998876521 1222 3479999999532 2222
Q ss_pred hcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
...-+...+++...+.++||.+||-|-. +|+++
T Consensus 56 ~~~~~~~~~i~~~~~~~~PvlGIClG~Q-lL~~~ 88 (211)
T 4gud_A 56 MKNLTERDLIELVKRVEKPLLGICLGMQ-LLGKL 88 (211)
T ss_dssp HHHHHHTTCHHHHHHCCSCEEEETHHHH-TTSSE
T ss_pred HHHHHhcChHHHHHHcCCCEEEEchhHh-HHHHH
Confidence 1222233467777889999999999999 89764
No 81
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.67 E-value=6.1e-05 Score=63.05 Aligned_cols=93 Identities=20% Similarity=0.268 Sum_probs=60.6
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh---
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA--- 237 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~--- 237 (277)
.||.++-. ...........+++..|.++.++-.+.. +...++ ...+|.|++|||......
T Consensus 13 ~~~~~i~~--~~~~~~~~i~~~l~~~G~~v~v~~~~~~-------------~~~~~~--l~~~Dglil~GG~~~~~~~~~ 75 (239)
T 1o1y_A 13 VRVLAIRH--VEIEDLGMMEDIFREKNWSFDYLDTPKG-------------EKLERP--LEEYSLVVLLGGYMGAYEEEK 75 (239)
T ss_dssp CEEEEECS--STTSSCTHHHHHHHHTTCEEEEECGGGT-------------CCCSSC--GGGCSEEEECCCSCCTTCTTT
T ss_pred eEEEEEEC--CCCCCchHHHHHHHhCCCcEEEeCCcCc-------------cccccc--hhcCCEEEECCCCccccCCcc
Confidence 45555544 3333344677888889998876643211 000111 236899999998532211
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhh
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
......+.++|+++.+++++|.+||-|.. +|+.
T Consensus 76 ~~~l~~~~~~i~~~~~~~~PiLGIC~G~Q-lL~~ 108 (239)
T 1o1y_A 76 YPFLKYEFQLIEEILKKEIPFLGICLGSQ-MLAK 108 (239)
T ss_dssp CTHHHHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred ChhHHHHHHHHHHHHHCCCCEEEEchhHH-HHHH
Confidence 11123678899999999999999999999 8886
No 82
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=97.54 E-value=0.00029 Score=62.81 Aligned_cols=183 Identities=17% Similarity=0.199 Sum_probs=100.9
Q ss_pred ccccChHHHHHHHHHHhCCCEEEEEchhHHH-HHHHcCCCCCCCCCCeEcCCCCCCHHHHHHHHHHHh---cChhHHHHH
Q 023800 56 NLKESEVLESIVKKQASDGRLYAAICVFLAV-ALGSWGLLKGLKDGKVVTTRGPGTPMEFVVALVEQL---YGKGKADEV 131 (277)
Q Consensus 56 ~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~-~La~aGll~g~~dg~~iT~~g~~~~~~~a~~li~~l---~g~~~a~~v 131 (277)
+.+....|-+||++..- --|..|-|=+++ .|=+.|-++| .+++. .... .+-.+.-++.. .+.+.+.+|
T Consensus 90 ~~~~~~~l~~~l~~~~i--~gi~giDTR~lt~~iR~~G~~~~----~i~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~v 161 (379)
T 1a9x_B 90 NFRNTEDLSSYLKRHNI--VAIADIDTRKLTRLLREKGAQNG----CIIAG-DNPD-AALALEKARAFPGLNGMDLAKEV 161 (379)
T ss_dssp CTTCCSCHHHHHHHTTC--EEEESSCHHHHHHHHHHHCCEEE----EEEES-SSCC-HHHHHHHHHHCCCSTTCBCHHHH
T ss_pred cccccCCHHHHHHHCCC--ccccCCCHHHHHHHHHhcCCeeE----EEecC-CCCC-HHHHHHHHHhCCCccccCcccee
Confidence 34566678888875431 124445554431 1223455553 34442 1222 22223333332 345566777
Q ss_pred hhcccccccCCCchhhc-ccCccccccCCCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEE
Q 023800 132 SGARVMRANHGDEFTIA-EFNPVQWTFDNSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLV 210 (277)
Q Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~ 210 (277)
.-.-.|.++++.. ... .+......-...+||+++=+ |+. ....+.|+++|.++.++-.+.
T Consensus 162 s~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~V~viD~-G~k----~ni~r~L~~~G~~v~vvp~~~------------- 222 (379)
T 1a9x_B 162 TTAEAYSWTQGSW-TLTGGLPQAKKEDELPFHVVAYDF-GAK----RNILRMLVDRGCRLTIVPAQT------------- 222 (379)
T ss_dssp SCSSCEEECCCCC-BTTTBSCCCCCGGGCCEEEEEEES-SCC----HHHHHHHHHTTEEEEEEETTC-------------
T ss_pred CCCCCEEeCCCCc-ccccccccccccccCCCEEEEEEC-CCh----HHHHHHHHHCCCEEEEEeccC-------------
Confidence 6554444322210 000 00000000001247877766 554 347788999999888774432
Q ss_pred eCcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 211 ADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 211 ~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
..+++...++|.|+++||...+. ......++++++.++++||.+||-|.. +|+.+
T Consensus 223 ---~~e~i~~~~~DGliLsGGPgdp~---~~~~~~~~Ir~~~~~~~PILGIClG~Q-LLa~A 277 (379)
T 1a9x_B 223 ---SAEDVLKMNPDGIFLSNGPGDPA---PCDYAITAIQKFLETDIPVFGICLGHQ-LLALA 277 (379)
T ss_dssp ---CHHHHHTTCCSEEEECCCSBCST---TCHHHHHHHHHHTTSCCCEEEETHHHH-HHHHH
T ss_pred ---CHHHHhhcCCCEEEEeCCCCChH---HHHHHHHHHHHHHHcCCCEEEECchHH-HHHHH
Confidence 12333334689999999864332 346788999999999999999999999 89863
No 83
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=97.31 E-value=0.00055 Score=56.10 Aligned_cols=88 Identities=18% Similarity=0.167 Sum_probs=55.9
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCC-cchHHh
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG-LGGAQA 237 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG-~~~~~~ 237 (277)
.++||.++-+.+-. .....+.|+++|.++.++..+. ..+++ .++|.||+||| ......
T Consensus 12 ~~~~i~~id~~~~~---~~~~~~~l~~~G~~~~vv~~~~----------------~~~~l--~~~DglIl~GG~p~~~~~ 70 (212)
T 2a9v_A 12 HMLKIYVVDNGGQW---THREWRVLRELGVDTKIVPNDI----------------DSSEL--DGLDGLVLSGGAPNIDEE 70 (212)
T ss_dssp CCCBEEEEEESCCT---TCHHHHHHHHTTCBCCEEETTS----------------CGGGG--TTCSEEEEEEECSCGGGT
T ss_pred ccceEEEEeCCCcc---HHHHHHHHHHCCCEEEEEeCCC----------------CHHHH--hCCCEEEECCCCCCCCcc
Confidence 34677776544322 2346678888998887765431 12333 34899999999 433322
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhh
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
....+.+.+++ .++++++.+||-|.. +|+.
T Consensus 71 ~~~~~~l~~~~---~~~~~PiLGIC~G~Q-ll~~ 100 (212)
T 2a9v_A 71 LDKLGSVGKYI---DDHNYPILGICVGAQ-FIAL 100 (212)
T ss_dssp GGGHHHHHHHH---HHCCSCEEEETHHHH-HHHH
T ss_pred cccchhHHHHH---HhCCCCEEEEChHHH-HHHH
Confidence 11223344443 478999999999999 8876
No 84
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=97.18 E-value=0.00033 Score=57.73 Aligned_cols=87 Identities=11% Similarity=0.097 Sum_probs=53.6
Q ss_pred CCeEEEEec-CCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 160 SPQILVPIA-NGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 160 ~~kV~ill~-~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
.++|+|+=+ +++. ..+...|+++|.++.++..+.. .+++...++|.|++|||.......
T Consensus 24 ~~~I~iiD~g~~~~----~~i~~~l~~~G~~~~vv~~~~~----------------~~~l~~~~~dglil~Gg~~~~~~~ 83 (218)
T 2vpi_A 24 EGAVVILDAGAQYG----KVIDRRVRELFVQSEIFPLETP----------------AFAIKEQGFRAIIISGGPNSVYAE 83 (218)
T ss_dssp TTCEEEEECSTTTT----HHHHHHHHHTTCCEEEECTTCC----------------HHHHHHHTCSEEEEEC--------
T ss_pred CCeEEEEECCCchH----HHHHHHHHHCCCEEEEEECCCC----------------hHHHhhcCCCEEEECCCCcccccc
Confidence 368999855 4443 3566888999998888755431 223322468999999985322111
Q ss_pred hcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhh
Q 023800 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
..+ .+.+...+.+++|.+||.|.. +|+.
T Consensus 84 -~~~---~~~~~~~~~~~PilGIC~G~Q-ll~~ 111 (218)
T 2vpi_A 84 -DAP---WFDPAIFTIGKPVLGICYGMQ-MMNK 111 (218)
T ss_dssp --CC---CCCGGGGTSSCCEEEETHHHH-HHHH
T ss_pred -cch---hHHHHHHHcCCCEEEEcHHHH-HHHH
Confidence 111 122344578999999999999 8876
No 85
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=97.15 E-value=0.0012 Score=55.67 Aligned_cols=79 Identities=15% Similarity=0.269 Sum_probs=53.8
Q ss_pred HHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcc-hHHhh-------------hcCHH
Q 023800 178 IIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLG-GAQAF-------------AKSKK 243 (277)
Q Consensus 178 ~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~-~~~~~-------------~~~~~ 243 (277)
..++.+.++|..+.++..... ..+.+. .+.+|.|+++||.. .+... ..+..
T Consensus 32 ~~~~~l~~aG~~pv~lp~~~~--------------~~~~~~-l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~ 96 (254)
T 3fij_A 32 RYVDAIQKVGGFPIALPIDDP--------------STAVQA-ISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSY 96 (254)
T ss_dssp HHHHHHHHHTCEEEEECCCCG--------------GGHHHH-HHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCc--------------hHHHHH-HhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHH
Confidence 466778888988887755432 112221 24689999999942 11110 11234
Q ss_pred HHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 244 LVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 244 ~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
.+++++++.+++++|.+||-|.. +|+.+
T Consensus 97 ~~~lir~a~~~~~PiLGIC~G~Q-ll~~a 124 (254)
T 3fij_A 97 EIALVRAALDAGKPIFAICRGMQ-LVNVA 124 (254)
T ss_dssp HHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 77899999999999999999999 88764
No 86
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=97.03 E-value=0.0014 Score=56.56 Aligned_cols=109 Identities=10% Similarity=0.090 Sum_probs=60.5
Q ss_pred CCCeEEEEecCC-CchhhHHHHHHHHHhCCC--eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchH
Q 023800 159 NSPQILVPIANG-SEEMEAVIIIDILRRAKA--NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (277)
Q Consensus 159 ~~~kV~ill~~g-~~~~e~~~~~~~l~~a~~--~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~ 235 (277)
+++||+||-... ...+| .-+...|+.... +++++.......-.++....-.--..+.+++..+||.+||.|+....
T Consensus 34 rplkI~ILnlmp~k~~te-~qf~rlL~~~~~qv~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGap~~~ 112 (301)
T 2vdj_A 34 RALKIAILNLMPTKQETE-AQLLRLIGNTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPVET 112 (301)
T ss_dssp CCEEEEEECCCSSHHHHH-HHHHHHHTCSSSCEEEEEECCCC------------CCEECHHHHTTSCEEEEEECCCTTTT
T ss_pred CCceEEEEeCCCCcCchH-HHHHHHhcCCCCcEEEEEEeccCCCCCCccHHHHhhcccCcccccccccCEEEECCCCCcC
Confidence 457999997632 22222 334444544443 45555443321101110000000124565555789999999985211
Q ss_pred ---HhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhh
Q 023800 236 ---QAFAKSKKLVNMLKKQKESNRPYGAICASPALVL 269 (277)
Q Consensus 236 ---~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lL 269 (277)
+....-+++.++++...++++++.+||-|.. ++
T Consensus 113 ~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ-~~ 148 (301)
T 2vdj_A 113 LSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQ-AG 148 (301)
T ss_dssp SCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHH-HH
T ss_pred CCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHH-HH
Confidence 1122236788888888899999999999999 63
No 87
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=96.99 E-value=0.0013 Score=53.59 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=64.7
Q ss_pred CCeEEEEecC-CCch--hhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcch-H
Q 023800 160 SPQILVPIAN-GSEE--MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG-A 235 (277)
Q Consensus 160 ~~kV~ill~~-g~~~--~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~-~ 235 (277)
.+||+|+-+- +..+ .=+.....+|++.|++++.+..... .++...+.+ ...|.|++|||... .
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~-----------~~~~~~~~l--~~ad~I~l~GG~~~~l 93 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATE-----------SLGEITTKL--RKNDFIYVTGGNTFFL 93 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTS-----------CHHHHHHHH--HHSSEEEECCSCHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCC-----------ChHHHHHHH--HhCCEEEECCCCHHHH
Confidence 3688888642 2111 1245678899999998877643221 011111222 35799999998531 1
Q ss_pred HhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 236 QAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
........+.+.|+++.++|++++++|.|+. +|++.
T Consensus 94 ~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~-~l~~~ 129 (206)
T 3l4e_A 94 LQELKRTGADKLILEEIAAGKLYIGESAGAV-ITSPN 129 (206)
T ss_dssp HHHHHHHTHHHHHHHHHHTTCEEEEETHHHH-TTSSB
T ss_pred HHHHHHCChHHHHHHHHHcCCeEEEECHHHH-Hhccc
Confidence 1123345788999999999999999999999 88753
No 88
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.90 E-value=0.0017 Score=60.95 Aligned_cols=90 Identities=14% Similarity=0.095 Sum_probs=60.6
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCC-cchHH-h
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG-LGGAQ-A 237 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG-~~~~~-~ 237 (277)
+++|+|+-+.. ..+....+.|+++|.++.++.... + .. ...+|.|++||| ..... .
T Consensus 4 m~~I~Iid~~~---g~~~~~~~~l~~~G~~~~vv~~~~--------------~---~~--l~~~DglILpGgG~~~~~~~ 61 (555)
T 1jvn_A 4 MPVVHVIDVES---GNLQSLTNAIEHLGYEVQLVKSPK--------------D---FN--ISGTSRLILPGVGNYGHFVD 61 (555)
T ss_dssp SCEEEEECCSC---SCCHHHHHHHHHTTCEEEEESSGG--------------G---CC--STTCSCEEEEECSCHHHHHH
T ss_pred CCEEEEEECCC---CCHHHHHHHHHHCCCEEEEECCcc--------------c---cc--cccCCEEEECCCCchHhHhh
Confidence 46899997641 122356788899999888764211 0 01 236899999994 32111 0
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
...+..+.++|+++.++++||.+||.|.. +|+.+
T Consensus 62 ~l~~~~~~~~i~~~~~~g~PiLGIC~G~Q-lL~~a 95 (555)
T 1jvn_A 62 NLFNRGFEKPIREYIESGKPIMGIXVGLQ-ALFAG 95 (555)
T ss_dssp HHHHTTCHHHHHHHHHTTCCEEEEEHHHH-TTEEE
T ss_pred hhhhccHHHHHHHHHHcCCcEEEEchhhh-hhhhh
Confidence 11122467899999999999999999999 89875
No 89
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=96.87 E-value=0.0039 Score=53.95 Aligned_cols=109 Identities=11% Similarity=0.083 Sum_probs=62.0
Q ss_pred CCCeEEEEecCC-CchhhHHHHHHHHHhCCC--eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchH
Q 023800 159 NSPQILVPIANG-SEEMEAVIIIDILRRAKA--NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (277)
Q Consensus 159 ~~~kV~ill~~g-~~~~e~~~~~~~l~~a~~--~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~ 235 (277)
+++||+||-... ...+| .-+...|+.... +++++.......-.++....-.--.++.+++..+||.+||.|+....
T Consensus 46 rplkI~ILnlmp~k~~te-~qf~rlL~~~~~qv~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGsP~~~ 124 (312)
T 2h2w_A 46 RPLEILILNLMPDKIKTE-IQLLRLLGNTPLQVNVTLLYTETHKPKHTPIEHILKFYTTFSAVKDRKFDGFIITGAPVEL 124 (312)
T ss_dssp CCEEEEEECCCSSHHHHH-HHHHHHHHSSSSCEEEEEECCSCCCCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCCSCTT
T ss_pred CCceEEEEeCCCCcCchH-HHHHHHhcCCCCcEEEEEEEccCCCCCCccHHHHhhccCCcccccccCcCEEEECCCCCCC
Confidence 457999997632 22222 345555655554 44445443320000000000000024555555789999999985211
Q ss_pred ---HhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhh
Q 023800 236 ---QAFAKSKKLVNMLKKQKESNRPYGAICASPALVL 269 (277)
Q Consensus 236 ---~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lL 269 (277)
.....-+++.++++...++++++.+||-|.. ++
T Consensus 125 ~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ-~~ 160 (312)
T 2h2w_A 125 LPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQ-AG 160 (312)
T ss_dssp SCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHH-HH
T ss_pred CCCccCchHHHHHHHHHHHHHcCCcEEEECHHHH-HH
Confidence 1222236788888888889999999999999 63
No 90
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=96.85 E-value=0.0018 Score=53.70 Aligned_cols=95 Identities=13% Similarity=0.079 Sum_probs=62.5
Q ss_pred CCeEEEEecCC--Cc-hhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH
Q 023800 160 SPQILVPIANG--SE-EMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (277)
Q Consensus 160 ~~kV~ill~~g--~~-~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~ 236 (277)
.+||+|+-+-. .. ..-+.....+|++.|+++..+... +...+++ .+.|.|++|||.. ..
T Consensus 31 ~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~---------------~d~~~~l--~~ad~I~lpGG~~-~~ 92 (229)
T 1fy2_A 31 RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRV---------------ADPLAAI--EKAEIIIVGGGNT-FQ 92 (229)
T ss_dssp CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSS---------------SCHHHHH--HHCSEEEECCSCH-HH
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEecc---------------ccHHHHH--hcCCEEEECCCcH-HH
Confidence 36888886542 22 122455677888888876554211 1111333 3579999999863 22
Q ss_pred h--hhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCC
Q 023800 237 A--FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHG 273 (277)
Q Consensus 237 ~--~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aG 273 (277)
- ......+.+.|+++.++|+++.++|.|+. +|++..
T Consensus 93 ~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~-~l~~~~ 130 (229)
T 1fy2_A 93 LLKESRERGLLAPMADRVKRGALYIGWSAGAN-LACPTI 130 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCEEEEETHHHH-HTSSBS
T ss_pred HHHHHHHCChHHHHHHHHHcCCEEEEECHHHH-hhcccc
Confidence 1 12234688899999999999999999999 898743
No 91
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=96.83 E-value=0.0014 Score=56.95 Aligned_cols=97 Identities=19% Similarity=0.143 Sum_probs=59.8
Q ss_pred CCeEEEEecCCCch--------hhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCC
Q 023800 160 SPQILVPIANGSEE--------MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (277)
Q Consensus 160 ~~kV~ill~~g~~~--------~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG 231 (277)
.+.|+|....+... .-.....+.|+.+|.++.++..+.. ...+.+. ...+|.|++|||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~-------------~~~i~~~-l~~~dglil~GG 95 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLT-------------EKDYEIL-FKSINGILFPGG 95 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCC-------------HHHHHHH-HHHSSEEEECCC
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEEecCCC-------------HHHHHHH-HhcCCEEEEeCC
Confidence 35788886543211 0112457888899998888755421 0112211 135899999998
Q ss_pred cchHHhh---hcCHHHHHHHHHHHHcC--CcEEEEchhhHHhhhh
Q 023800 232 LGGAQAF---AKSKKLVNMLKKQKESN--RPYGAICASPALVLEP 271 (277)
Q Consensus 232 ~~~~~~~---~~~~~~~~~l~~~~~~~--~~i~aiC~G~~~lLa~ 271 (277)
....... .....+.++++++.+++ ++|.+||-|.. +|+.
T Consensus 96 ~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Q-ll~~ 139 (315)
T 1l9x_A 96 SVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFE-ELSL 139 (315)
T ss_dssp CCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHH-HHHH
T ss_pred CcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHH-HHHH
Confidence 5322111 01135677777776664 99999999999 8875
No 92
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=96.74 E-value=0.0029 Score=53.84 Aligned_cols=96 Identities=15% Similarity=0.145 Sum_probs=58.7
Q ss_pred CeEEEEecCC--CchhhHHHHHHHHHhC----CCeEEEEeeCCCceEEcccCcEEEeCcch-hhhccCCccEEEEcCCcc
Q 023800 161 PQILVPIANG--SEEMEAVIIIDILRRA----KANVVVASVADKLEILASCQVKLVADMLI-DEAAKLSYDLIVLPGGLG 233 (277)
Q Consensus 161 ~kV~ill~~g--~~~~e~~~~~~~l~~a----~~~v~~vs~~~~~~v~~~~g~~i~~~~~~-~~~~~~~~D~livpGG~~ 233 (277)
.+|+|+.-.| +.+ .+..+.+.|..+ +.++.++..+.. .+....+. .+ .. ...+|.|++|||..
T Consensus 9 ~~Iaivg~y~~~~~d-ny~S~~~aL~~~g~~~~~~v~v~~~~~~-~~~~~~~~------~~~~~--~~~~dgiil~GG~~ 78 (273)
T 2w7t_A 9 VRIAFVGKYLQDAGD-TYFSVLQCFEHCQIALQVRLDILYVDSE-ELEGPNAD------EARKA--LLGCDGIFVPGGFG 78 (273)
T ss_dssp EEEEEEECCHHHHTT-TTHHHHHHHHHHHHHHTCCEEEEEEEGG-GGSSTTTH------HHHHH--HHTCSEEEECCCCT
T ss_pred CEEEEEeCCCcCCch-HHHHHHHHHHHHHHhcCCceEEeccChh-hcccccch------hHHHH--HhhCCEEEecCCCC
Confidence 5788884221 112 344555555444 456777765532 11111110 02 22 24689999999963
Q ss_pred hHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhh
Q 023800 234 GAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 234 ~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
. ...+...++++.+.+.++||.+||.|.. +|+.
T Consensus 79 ~----~~~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~ 111 (273)
T 2w7t_A 79 N----RGVDGKCAAAQVARMNNIPYFGVXLGMQ-VAVI 111 (273)
T ss_dssp T----TTHHHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred C----cCchhHHHHHHHHHHCCCcEEEECcCHH-HHHH
Confidence 2 2233577889998889999999999999 8875
No 93
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=96.58 E-value=0.0018 Score=55.57 Aligned_cols=101 Identities=12% Similarity=0.125 Sum_probs=61.1
Q ss_pred CeEEEE-ecCCCchhhHHHHHHHHHhCCC----eEEEEeeCCCceEEcccCcEEEeCcc-hhhh--ccCCccEEEEcCCc
Q 023800 161 PQILVP-IANGSEEMEAVIIIDILRRAKA----NVVVASVADKLEILASCQVKLVADML-IDEA--AKLSYDLIVLPGGL 232 (277)
Q Consensus 161 ~kV~il-l~~g~~~~e~~~~~~~l~~a~~----~v~~vs~~~~~~v~~~~g~~i~~~~~-~~~~--~~~~~D~livpGG~ 232 (277)
+||+|+ =+++... .+..+.+.|+.+|+ ++.++..+.. .+... .+..+.. ++++ ...++|.|++|||.
T Consensus 26 ~~Iavv~d~~~~~~-s~~si~~~L~~~G~~~~~~v~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~l~~~dgiil~GG~ 100 (289)
T 2v4u_A 26 CSIALVGKYTKLRD-CYASVFKALEHSALAINHKLNLMYIDSI-DLEKI---TETEDPVKFHEAWQKLCKADGILVPGGF 100 (289)
T ss_dssp EEEEEEESCSSCCG-GGHHHHHHHHHHHHHTTEEEEEEEEEGG-GGSHH---HHHHCHHHHHHHHHHHHHCSEEEECSCC
T ss_pred eEEEEEecCcCCCc-cHHHHHHHHHHhhhhhCCceEEEEechh-hcccc---cccCChhhhhhHHHHHhhCCEEEecCCC
Confidence 478886 4433322 14577788887764 4555544332 11110 0111111 1110 02368999999996
Q ss_pred chHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhh
Q 023800 233 GGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
.. . ..+...++++++.+.+++|.+||.|.. +|+.
T Consensus 101 ~~-~---~~~~~~~~i~~~~~~~~PilGIC~G~Q-~l~~ 134 (289)
T 2v4u_A 101 GI-R---GTLGKLQAISWARTKKIPFLGVXLGMQ-LAVI 134 (289)
T ss_dssp SS-T---THHHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred Cc-h---hHHHHHHHHHHHHHcCCcEEEECccHH-HHHH
Confidence 42 2 235788999999999999999999999 8876
No 94
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=96.47 E-value=0.01 Score=55.53 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=57.7
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhc
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~ 240 (277)
.+|+|+=+-.-. .......+++.|..+.++..+.. .+++...++|.||+|||....... .
T Consensus 8 ~~IlilD~Gs~~---~~~I~r~lre~Gv~~eiv~~~~~----------------~~~i~~~~~dgIIlsGGp~s~~~~-~ 67 (556)
T 3uow_A 8 DKILVLNFGSQY---FHLIVKRLNNIKIFSETKDYGVE----------------LKDIKDMNIKGVILSGGPYSVTEA-G 67 (556)
T ss_dssp CEEEEEESSCTT---HHHHHHHHHHTTCCEEEEETTCC----------------GGGTTTSCEEEEEECCCSCCTTST-T
T ss_pred CEEEEEECCCcc---HHHHHHHHHHCCCeEEEEECCCC----------------HHHHhhcCCCEEEECCCCCccccc-C
Confidence 567776543222 23567788899998888865421 233333468999999986432211 1
Q ss_pred CHHHH-HHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 241 SKKLV-NMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 241 ~~~~~-~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
.+.+. ..++.+.++++||.+||-|.. +|+.+
T Consensus 68 ~~~~~~~l~~~a~~~g~PvLGIC~G~Q-lLa~~ 99 (556)
T 3uow_A 68 SPHLKKEVFEYFLEKKIPIFGICYGMQ-EIAVQ 99 (556)
T ss_dssp CCCCCHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred CcchhHHHHHHhhhcCCCEEEECHHHH-HHHHH
Confidence 12222 234445677999999999999 89874
No 95
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=96.26 E-value=0.0024 Score=51.32 Aligned_cols=70 Identities=16% Similarity=0.180 Sum_probs=47.0
Q ss_pred hHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC---CCccch-hccccChHHHHHHHHHHhCCCEEEEE
Q 023800 5 ITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGA-TNLKESEVLESIVKKQASDGRLYAAI 80 (277)
Q Consensus 5 ~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~---gG~~~~-~~~~~~~~~~~~l~~~~~~g~~i~ai 80 (277)
...+.|++.|+++.+++... .+++++.. ||.+.. +.++.+..+.++++++.++|+++.+|
T Consensus 15 ~~~~~l~~~g~~~~~~~~~~----------------~l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgI 78 (196)
T 2nv0_A 15 EHIHAIEACGAAGLVVKRPE----------------QLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGT 78 (196)
T ss_dssp HHHHHHHHTTCEEEEECSGG----------------GGGGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCEEEEeCChH----------------HHhhCCEEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEE
Confidence 34578888999888776421 12232221 664222 22333455688999999999999999
Q ss_pred chhHHHHHHHc
Q 023800 81 CVFLAVALGSW 91 (277)
Q Consensus 81 C~g~~~~La~a 91 (277)
|.|.. +|+.+
T Consensus 79 C~G~q-~l~~~ 88 (196)
T 2nv0_A 79 CAGLI-ILAKE 88 (196)
T ss_dssp THHHH-HHSBC
T ss_pred CHHHH-HHHHH
Confidence 99999 88875
No 96
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=96.17 E-value=0.015 Score=55.40 Aligned_cols=89 Identities=20% Similarity=0.372 Sum_probs=59.8
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~ 239 (277)
.++|.|+ |.... =.......++..|+++.++..+.. . + ..++|.|||+||...+....
T Consensus 446 Gk~Ilvi--D~gds-f~~~l~~~l~~~G~~v~Vv~~d~~--------------~---~--~~~~DgIIlsGGPg~p~d~~ 503 (645)
T 3r75_A 446 GCRALIV--DAEDH-FTAMIAQQLSSLGLATEVCGVHDA--------------V---D--LARYDVVVMGPGPGDPSDAG 503 (645)
T ss_dssp TCEEEEE--ESSCT-HHHHHHHHHHHTTCEEEEEETTCC--------------C---C--GGGCSEEEECCCSSCTTCTT
T ss_pred CCEEEEE--ECCcc-HHHHHHHHHHHCCCEEEEEECCCc--------------c---c--ccCCCEEEECCCCCChhhhh
Confidence 3566665 32222 124577888899999988865431 0 1 13589999998864333211
Q ss_pred --cCHHHHHHHHHHHHcCCcEEEEchhhHHhhhh
Q 023800 240 --KSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 240 --~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
..+.+.++|++..+.+++|.+||-|.. +|+.
T Consensus 504 ~p~i~~~~~lI~~a~~~~iPiLGIClG~Q-lLa~ 536 (645)
T 3r75_A 504 DPRIARLYAWLRHLIDEGKPFMAVCLSHQ-ILNA 536 (645)
T ss_dssp SHHHHHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred hhhHHHHHHHHHHHHHCCCCEEEECHHHH-HHHH
Confidence 112467888988899999999999999 7876
No 97
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=96.01 E-value=0.003 Score=51.84 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=46.0
Q ss_pred HHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC---CCccch-hccccChHHHHHHHHHHhCCCEEEEEc
Q 023800 6 TIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGA-TNLKESEVLESIVKKQASDGRLYAAIC 81 (277)
Q Consensus 6 ~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~---gG~~~~-~~~~~~~~~~~~l~~~~~~g~~i~aiC 81 (277)
.++.|+++|+++.+++... .+++++.. ||.... ..+..+..+.++|+++.+++++|.+||
T Consensus 38 ~~~~l~~~G~~~~~~~~~~----------------~l~~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC 101 (219)
T 1q7r_A 38 HVRAIEACGAEAVIVKKSE----------------QLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTC 101 (219)
T ss_dssp HHHHHHHTTCEEEEECSGG----------------GGTTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHCCCEEEEECCHH----------------HHhhCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEEC
Confidence 3577888888888776421 12222221 663222 122334556789999999999999999
Q ss_pred hhHHHHHHHc
Q 023800 82 VFLAVALGSW 91 (277)
Q Consensus 82 ~g~~~~La~a 91 (277)
.|.. +|+.+
T Consensus 102 ~G~Q-lL~~~ 110 (219)
T 1q7r_A 102 AGLI-LLAKR 110 (219)
T ss_dssp THHH-HHEEE
T ss_pred HHHH-HHHHH
Confidence 9999 88875
No 98
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=95.71 E-value=0.011 Score=54.95 Aligned_cols=88 Identities=14% Similarity=0.080 Sum_probs=54.8
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhc
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~ 240 (277)
.+|+|+=+-.-.. ..+...++++|..+.++..+.. .+++....+|.||+|||.....
T Consensus 11 ~~I~IlD~g~~~~---~~i~r~lr~~Gv~~~i~p~~~~----------------~~~i~~~~~dgIILsGGp~sv~---- 67 (527)
T 3tqi_A 11 HRILILDFGSQYA---QLIARRVREIGVYCELMPCDID----------------EETIRDFNPHGIILSGGPETVT---- 67 (527)
T ss_dssp SEEEEEECSCTTH---HHHHHHHHHHTCEEEEEETTCC----------------SSSSTTTCCSEEEECCCCC-------
T ss_pred CeEEEEECCCccH---HHHHHHHHHCCCeEEEEECCCC----------------HHHHHhcCCCEEEECCcCcccc----
Confidence 5788885532222 4567888999999888854322 1222212469999999964221
Q ss_pred CHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 241 SKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 241 ~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
++......+..++.++||.+||-|.. +|+.+
T Consensus 68 ~~~~~~~~~~~~~~~~PvLGIC~G~Q-lla~~ 98 (527)
T 3tqi_A 68 LSHTLRAPAFIFEIGCPVLGICYGMQ-TMAYQ 98 (527)
T ss_dssp ------CCCSTTTSSSCEEEETHHHH-HHHHH
T ss_pred cCCChhhHHHHHhcCCCEEEEChHHH-HHHHH
Confidence 22223344556788999999999999 88863
No 99
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=95.60 E-value=0.0062 Score=49.45 Aligned_cols=69 Identities=10% Similarity=0.208 Sum_probs=44.8
Q ss_pred HHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC---CCccchh-ccccChHHHHHHHHHHhCCCEEEEEc
Q 023800 6 TIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGAT-NLKESEVLESIVKKQASDGRLYAAIC 81 (277)
Q Consensus 6 ~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~---gG~~~~~-~~~~~~~~~~~l~~~~~~g~~i~aiC 81 (277)
..+.|++.|+++.+++... .+++++.. ||.+... .+..+..+.++|+++.++|++|.+||
T Consensus 35 ~~~~l~~~g~~~~~~~~~~----------------~l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC 98 (208)
T 2iss_D 35 HVEALHKLGVETLIVKLPE----------------QLDMVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATC 98 (208)
T ss_dssp HHHHHHHTTCEEEEECSGG----------------GGGGCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHCCCEEEEeCChH----------------HHhhCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEEC
Confidence 4567777888877775321 12222221 6642221 12223446789999999999999999
Q ss_pred hhHHHHHHHc
Q 023800 82 VFLAVALGSW 91 (277)
Q Consensus 82 ~g~~~~La~a 91 (277)
.|.. +|+.+
T Consensus 99 ~G~Q-lL~~~ 107 (208)
T 2iss_D 99 AGVI-LLAKR 107 (208)
T ss_dssp HHHH-HHEEE
T ss_pred HHHH-HHHHH
Confidence 9999 88875
No 100
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=95.53 E-value=0.046 Score=43.57 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=49.9
Q ss_pred eEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhh-hccCCccEEEEcCCcchHHhhhc
Q 023800 162 QILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDE-AAKLSYDLIVLPGGLGGAQAFAK 240 (277)
Q Consensus 162 kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~-~~~~~~D~livpGG~~~~~~~~~ 240 (277)
||+|+=..+ .. .....+.|++.|.++.++..+.. ...+.+ ....+.|.+++.||...+..
T Consensus 2 ~i~iiDn~~--s~-~~~i~~~l~~~G~~~~v~~~~~~-------------~~~i~~~l~~~~~~~iil~gGpg~~~~--- 62 (192)
T 1i1q_B 2 DILLLDNID--SF-TWNLADQLRTNGHNVVIYRNHIP-------------AQTLIDRLATMKNPVLMLSPGPGVPSE--- 62 (192)
T ss_dssp EEEEEECSC--SS-HHHHHHHHHHTTCEEEEEETTSC-------------SHHHHHHHTTCSSEEEEECCCSSCGGG---
T ss_pred cEEEEECCc--cH-HHHHHHHHHHCCCeEEEEECCCC-------------HHHHHHHhhhccCCeEEECCCCcCchh---
Confidence 566664222 11 24557888899999888765421 011111 11112334666655433322
Q ss_pred CHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 241 SKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 241 ~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
......++ +..+++++|.+||-|.. +|+++
T Consensus 63 ~~~~~~l~-~~~~~~~PilGIC~G~Q-ll~~~ 92 (192)
T 1i1q_B 63 AGCMPELL-TRLRGKLPIIGICLGHQ-AIVEA 92 (192)
T ss_dssp STTHHHHH-HHHBTTBCEEEETHHHH-HHHHH
T ss_pred CchHHHHH-HHHhcCCCEEEECcChH-HHHHH
Confidence 22223333 44678999999999999 89873
No 101
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.13 E-value=0.011 Score=46.96 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=46.2
Q ss_pred hHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC---CCccc-hhccccChHHHHHHHHHHhCC-CEEEE
Q 023800 5 ITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPG-ATNLKESEVLESIVKKQASDG-RLYAA 79 (277)
Q Consensus 5 ~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~---gG~~~-~~~~~~~~~~~~~l~~~~~~g-~~i~a 79 (277)
...+.|++.|+++.+++... .+++++.. ||.+. ...+..+..+.++++++.+++ ++|.+
T Consensus 16 ~~~~~l~~~G~~~~~~~~~~----------------~l~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilG 79 (191)
T 2ywd_A 16 EHKEALKRLGIEAKEVRKKE----------------HLEGLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFG 79 (191)
T ss_dssp HHHHHHHTTTCCCEEECSGG----------------GGTTCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCEEEEeCChh----------------hhccCCEEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEE
Confidence 45677888888887765321 12222221 66322 222322456788999999999 99999
Q ss_pred EchhHHHHHHHc
Q 023800 80 ICVFLAVALGSW 91 (277)
Q Consensus 80 iC~g~~~~La~a 91 (277)
||.|.. +|+.+
T Consensus 80 iC~G~Q-~l~~~ 90 (191)
T 2ywd_A 80 TCAGAI-WLAKE 90 (191)
T ss_dssp ETHHHH-HHEEE
T ss_pred ECHHHH-HHHHH
Confidence 999999 88875
No 102
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=95.07 E-value=0.019 Score=52.83 Aligned_cols=151 Identities=12% Similarity=0.128 Sum_probs=83.0
Q ss_pred CCCeEcCCCCCCHHHHHHHHHHHhcChhHHHHHhhcccccccCCCchhhcccCcccccc---C--CCCeEEEEe-cCCCc
Q 023800 99 DGKVVTTRGPGTPMEFVVALVEQLYGKGKADEVSGARVMRANHGDEFTIAEFNPVQWTF---D--NSPQILVPI-ANGSE 172 (277)
Q Consensus 99 dg~~iT~~g~~~~~~~a~~li~~l~g~~~a~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~kV~ill-~~g~~ 172 (277)
..++|...+..+-.+.=+.+=+ ....+.+.+.+.++....+ +.+-..+...+ + ...+|+++= |-+..
T Consensus 234 ~~~VI~i~DvdtiY~vpl~L~~----qGl~~~~~~~l~l~~~~~~---~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~ 306 (535)
T 3nva_A 234 VDHIVSSYDVETSYEVPIILES----QKLVSKILSRLKLEDRQVD---LTDWISFVNNIKGINSKKTINIALVGKYTKLK 306 (535)
T ss_dssp GGGEEEEECCSCGGGHHHHHHH----HTHHHHHHHHTTCCCCCCC---CHHHHHHHHHHHTTTCCCEEEEEEEESCTTSG
T ss_pred hhceEecCCCChHHHhHHHHHH----CCcHHHHHHHcCCCCCCCC---HHHHHHHHHHhhccCCCCeeEEEEEecCcCCc
Confidence 5678888888764333233322 3456667777766532211 11111111111 1 223555543 22221
Q ss_pred hhhHHHHHHHHHhCC----CeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHH
Q 023800 173 EMEAVIIIDILRRAK----ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNML 248 (277)
Q Consensus 173 ~~e~~~~~~~l~~a~----~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l 248 (277)
-.+....++|..++ .++.+.-.+.. .+... +. ...++ ..++|.|++|||.+.. ..+...+++
T Consensus 307 -DaY~Sv~eAL~hag~~~~~~V~I~wIds~-~l~~~-~~-----~~~~~--L~~~DgIIlpGG~G~~----~~~g~i~~i 372 (535)
T 3nva_A 307 -DSYISIKEAIYHASAYIGVRPKLIWIEST-DLESD-TK-----NLNEI--LGNVNGIIVLPGFGSR----GAEGKIKAI 372 (535)
T ss_dssp -GGGHHHHHHHHHHHHHTTCEEEEEEEEGG-GGCCS-SS-----CCTTT--TTSCSEEEECCCCSST----THHHHHHHH
T ss_pred -hhHHHHHHHHHHHHHHcCCCeEEEEecch-hcccc-cc-----chhhh--ccCCCEEEECCCCCCc----cHHHHHHHH
Confidence 22445666776554 46666544432 11111 00 01222 3579999999997422 335778899
Q ss_pred HHHHHcCCcEEEEchhhHHhhhh
Q 023800 249 KKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 249 ~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
+.+.++++|+.+||-|.. +|+.
T Consensus 373 r~a~~~~~PiLGIClG~Q-ll~v 394 (535)
T 3nva_A 373 KYAREHNIPFLGICFGFQ-LSIV 394 (535)
T ss_dssp HHHHHHTCCEEEETHHHH-HHHH
T ss_pred HHHHHcCCcEEEECcchh-HHHH
Confidence 999999999999999999 7764
No 103
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=95.06 E-value=0.027 Score=52.35 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=55.5
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhc
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~ 240 (277)
++|+|+=+.+-.. ......++++|..+.++..+.. .+++..-.+|.||+|||...... ..
T Consensus 8 ~~IlIlD~g~~~~---~~i~r~lr~~G~~~~i~p~~~~----------------~~~i~~~~~dgiILsGGp~s~~~-~~ 67 (525)
T 1gpm_A 8 HRILILDFGSQYT---QLVARRVRELGVYCELWAWDVT----------------EAQIRDFNPSGIILSGGPESTTE-EN 67 (525)
T ss_dssp SEEEEEECSCTTH---HHHHHHHHHTTCEEEEEESCCC----------------HHHHHHHCCSEEEECCCSSCTTS-TT
T ss_pred CEEEEEECCCccH---HHHHHHHHHCCCEEEEEECCCC----------------HHHHhccCCCEEEECCcCccccc-cC
Confidence 5788886543222 4567889999998888754421 22222124699999998642221 11
Q ss_pred CHHHHHHHHHHHHcCCcEEEEchhhHHhhhh
Q 023800 241 SKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 241 ~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
.+.+ .+..++.++||.+||-|.. +|+.
T Consensus 68 ~~~~---~~~~~~~g~PvLGIC~G~Q-lla~ 94 (525)
T 1gpm_A 68 SPRA---PQYVFEAGVPVFGVCYGMQ-TMAM 94 (525)
T ss_dssp CCCC---CGGGGTSSSCEEEETHHHH-HHHH
T ss_pred Ccch---HHHHHHCCCCEEEEChHHH-HHHH
Confidence 1111 2345578999999999999 8886
No 104
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=95.00 E-value=0.094 Score=43.26 Aligned_cols=74 Identities=14% Similarity=0.211 Sum_probs=47.6
Q ss_pred HHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC---CCccchhcccc----C--hHHHHHHHHHHhCCCEE
Q 023800 7 IDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGATNLKE----S--EVLESIVKKQASDGRLY 77 (277)
Q Consensus 7 ~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~---gG~~~~~~~~~----~--~~~~~~l~~~~~~g~~i 77 (277)
.+.+++.|+++.++....+.++ |+ .+++++.. ||...+..... - ....++|++..+++++|
T Consensus 18 ~~~l~~~g~~~~~~~~~~~~~~---------p~-~~~~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Pv 87 (236)
T 3l7n_A 18 LAWAALRGHDVSMTKVYRYEKL---------PK-DIDDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKII 87 (236)
T ss_dssp HHHHHHTTCEEEEEEGGGTCCC---------CS-CGGGCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHCCCeEEEEeeeCCCCC---------CC-CccccCEEEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCE
Confidence 4557788999998887542211 11 22333322 66322121111 1 34789999999999999
Q ss_pred EEEchhHHHHHHHc
Q 023800 78 AAICVFLAVALGSW 91 (277)
Q Consensus 78 ~aiC~g~~~~La~a 91 (277)
.+||-|.. +|+.+
T Consensus 88 LGIClG~Q-lL~~~ 100 (236)
T 3l7n_A 88 VGVCLGAQ-LMGVA 100 (236)
T ss_dssp EEETHHHH-HHHHH
T ss_pred EEEchHHH-HHHHH
Confidence 99999999 89887
No 105
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=94.90 E-value=0.021 Score=45.95 Aligned_cols=68 Identities=21% Similarity=0.217 Sum_probs=45.8
Q ss_pred HHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC---C-Cccch--hccccChHHHHHHHHHHhCCCEEEE
Q 023800 6 TIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---C-GMPGA--TNLKESEVLESIVKKQASDGRLYAA 79 (277)
Q Consensus 6 ~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~---g-G~~~~--~~~~~~~~~~~~l~~~~~~g~~i~a 79 (277)
..+.|++.|+++.+++... .+++++.. | |.+.. ..++ +..+.++++++.+++++|.+
T Consensus 18 ~~~~l~~~G~~~~~~~~~~----------------~l~~~d~lil~G~g~~~~~~~~l~-~~~~~~~i~~~~~~~~PilG 80 (200)
T 1ka9_H 18 AAKALEAAGFSVAVAQDPK----------------AHEEADLLVLPGQGHFGQVMRAFQ-ESGFVERVRRHLERGLPFLG 80 (200)
T ss_dssp HHHHHHHTTCEEEEESSTT----------------SCSSCSEEEECCCSCHHHHHHTTS-SSCTHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHCCCeEEEecChH----------------HcccCCEEEECCCCcHHHHHHHHH-hcCHHHHHHHHHHcCCeEEE
Confidence 4678889999988876321 12222211 4 32211 1222 25578999999999999999
Q ss_pred EchhHHHHHHHc
Q 023800 80 ICVFLAVALGSW 91 (277)
Q Consensus 80 iC~g~~~~La~a 91 (277)
||.|.. +|+.+
T Consensus 81 IC~G~Q-ll~~~ 91 (200)
T 1ka9_H 81 ICVGMQ-VLYEG 91 (200)
T ss_dssp CTHHHH-TTSSE
T ss_pred EcHHHH-HHHHh
Confidence 999999 89987
No 106
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=94.77 E-value=0.061 Score=44.96 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=48.0
Q ss_pred HHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC---CCccch-hccccChHHHHHHHHHHhCCCEEEEEch
Q 023800 7 IDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGA-TNLKESEVLESIVKKQASDGRLYAAICV 82 (277)
Q Consensus 7 ~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~---gG~~~~-~~~~~~~~~~~~l~~~~~~g~~i~aiC~ 82 (277)
.+.|++.|+++.++....+.+. | ..+++.+.. ||.... +..+....+.++++++.+.+++|.+||.
T Consensus 21 ~~~l~~~G~~v~v~~~~~~~~~---------p-~~~~~~d~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~ 90 (250)
T 3m3p_A 21 GDFLAGEHIPFQVLRMDRSDPL---------P-AEIRDCSGLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCL 90 (250)
T ss_dssp HHHHHHTTCCEEEEEGGGTCCC---------C-SCGGGSSEEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETH
T ss_pred HHHHHHCCCeEEEEeccCCCcC---------c-CccccCCEEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECH
Confidence 4567888999998886542211 1 112233222 553211 1122235678999999999999999999
Q ss_pred hHHHHHHHc
Q 023800 83 FLAVALGSW 91 (277)
Q Consensus 83 g~~~~La~a 91 (277)
|.. +|+.+
T Consensus 91 G~Q-ll~~~ 98 (250)
T 3m3p_A 91 GGQ-LLAKA 98 (250)
T ss_dssp HHH-HHHHH
T ss_pred HHH-HHHHH
Confidence 999 89887
No 107
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=94.51 E-value=0.081 Score=54.14 Aligned_cols=39 Identities=10% Similarity=0.061 Sum_probs=33.9
Q ss_pred ccChHHHHHHHHHH-hCCCEEEEEchhHHHHHHHc-CCCCCC
Q 023800 58 KESEVLESIVKKQA-SDGRLYAAICVFLAVALGSW-GLLKGL 97 (277)
Q Consensus 58 ~~~~~~~~~l~~~~-~~g~~i~aiC~g~~~~La~a-Gll~g~ 97 (277)
..++.+.+.++++. ++++++.+||.|.+ +|.++ |||.|.
T Consensus 1119 l~~~~l~~~l~~~~~~~g~pvLGICnG~Q-lL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1119 LFNHRVRDEFETFFHRPQTLALGVCNGCQ-MMSNLRELIPGS 1159 (1303)
T ss_dssp HTSHHHHHHHHHHHHSSSCEEEEETHHHH-HHHTTGGGSTTC
T ss_pred HhchhHHHHHHHHHHhCCCcEEEECHHHH-HHHHhcCcCCCC
Confidence 45678888899875 68999999999999 99999 999875
No 108
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=94.31 E-value=0.041 Score=51.16 Aligned_cols=46 Identities=28% Similarity=0.472 Sum_probs=37.7
Q ss_pred CCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhh
Q 023800 221 LSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (277)
Q Consensus 221 ~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~ 271 (277)
..+|.|++|||...+ ..+...++++.+.++++|+.+||-|-. +|+.
T Consensus 342 ~~~DGIilsGGpg~~----~~~g~~~~i~~a~~~~~PiLGIClG~Q-ll~v 387 (545)
T 1s1m_A 342 KGLDAILVPGGFGYR----GVEGMITTARFARENNIPYLGICLGMQ-VALI 387 (545)
T ss_dssp TTCSEEEECCCCSST----THHHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred hcCCEEEECCCCCCc----cchhhHHHHHHHHHCCCcEEEECChHH-HHHH
Confidence 468999999996432 235677899999999999999999999 7874
No 109
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=94.06 E-value=0.041 Score=51.20 Aligned_cols=47 Identities=23% Similarity=0.345 Sum_probs=37.5
Q ss_pred CCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 221 LSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 221 ~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
..+|.|++|||.+.. ..+..+.+++.+.++++|+.+||-|-. +|+.+
T Consensus 354 ~~~DGIILpGGfGd~----~~~g~i~~ir~a~e~~iPiLGICLGmQ-lL~~a 400 (550)
T 1vco_A 354 RDVSGILVPGGFGVR----GIEGKVRAAQYARERKIPYLGICLGLQ-IAVIE 400 (550)
T ss_dssp TTCSCEEECCCCSST----THHHHHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred hcCCEEEECCCCCCc----chhhhHHHHHHHHHCCCcEEEECcCHH-HHHHH
Confidence 468999999996432 224567888988889999999999999 78653
No 110
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=93.90 E-value=0.08 Score=41.98 Aligned_cols=69 Identities=10% Similarity=0.107 Sum_probs=46.2
Q ss_pred hHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccc--cccC---CCccchhccccChHHHHHHHHHHhCCCEEEE
Q 023800 5 ITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSN--CRDA---CGMPGATNLKESEVLESIVKKQASDGRLYAA 79 (277)
Q Consensus 5 ~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~--~~~~---gG~~~~~~~~~~~~~~~~l~~~~~~g~~i~a 79 (277)
...+.|++.|+++.++.... .. ..+.+ ++.. ||. .+. +...+.++++++.++++++.+
T Consensus 15 ~~~~~l~~~G~~~~~~~~~~--~~-----------~~~~~~~~dglil~Gg~-~~~---~~~~~~~~i~~~~~~~~PilG 77 (189)
T 1wl8_A 15 RIWRTLRYLGVETKIIPNTT--PL-----------EEIKAMNPKGIIFSGGP-SLE---NTGNCEKVLEHYDEFNVPILG 77 (189)
T ss_dssp HHHHHHHHTTCEEEEEETTC--CH-----------HHHHHTCCSEEEECCCS-CTT---CCTTHHHHHHTGGGTCSCEEE
T ss_pred HHHHHHHHCCCeEEEEECCC--Ch-----------HHhcccCCCEEEECCCC-Chh---hhhhHHHHHHHHhhCCCeEEE
Confidence 45778889999988887542 00 01111 1111 663 322 245568899877789999999
Q ss_pred EchhHHHHHHHc
Q 023800 80 ICVFLAVALGSW 91 (277)
Q Consensus 80 iC~g~~~~La~a 91 (277)
||.|.. +|+.+
T Consensus 78 IC~G~Q-~l~~~ 88 (189)
T 1wl8_A 78 ICLGHQ-LIAKF 88 (189)
T ss_dssp ETHHHH-HHHHH
T ss_pred EcHHHH-HHHHH
Confidence 999999 89886
No 111
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=93.51 E-value=0.11 Score=41.49 Aligned_cols=73 Identities=11% Similarity=0.113 Sum_probs=43.9
Q ss_pred hHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccc--cccC---CCccchhccccChHHHHHHHHHHhCCCEEEE
Q 023800 5 ITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSN--CRDA---CGMPGATNLKESEVLESIVKKQASDGRLYAA 79 (277)
Q Consensus 5 ~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~--~~~~---gG~~~~~~~~~~~~~~~~l~~~~~~g~~i~a 79 (277)
.+.+.|++.|+++.++..+. ... + .+.+ ++.. ||.......++.+...++++++ +.++++.+
T Consensus 16 ~~~~~l~~~G~~~~v~~~~~-~~~----------~-~~~~~~~dglil~gG~~~~~~~~~~~~~~~~i~~~-~~~~PvLG 82 (195)
T 1qdl_B 16 NIAQIVGELGSYPIVIRNDE-ISI----------K-GIERIDPDRLIISPGPGTPEKREDIGVSLDVIKYL-GKRTPILG 82 (195)
T ss_dssp HHHHHHHHTTCEEEEEETTT-SCH----------H-HHHHHCCSEEEECCCSSCTTSHHHHTTHHHHHHHH-TTTSCEEE
T ss_pred HHHHHHHhCCCEEEEEeCCC-CCH----------H-HHhhCCCCEEEECCCCCChhhhhhhhHHHHHHHHh-cCCCcEEE
Confidence 35678899999998887542 000 0 1111 1111 5522222111122356888875 78999999
Q ss_pred EchhHHHHHHHc
Q 023800 80 ICVFLAVALGSW 91 (277)
Q Consensus 80 iC~g~~~~La~a 91 (277)
||-|.. +|+.+
T Consensus 83 IC~G~Q-lL~~~ 93 (195)
T 1qdl_B 83 VCLGHQ-AIGYA 93 (195)
T ss_dssp ETHHHH-HHHHH
T ss_pred EehHHH-HHHHH
Confidence 999999 89987
No 112
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=93.39 E-value=0.053 Score=52.07 Aligned_cols=89 Identities=11% Similarity=0.103 Sum_probs=54.3
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhh
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~ 239 (277)
..+|+|+=+.+-... .+...+++.|..+.++..+. ..+++...++|.||++||...... .
T Consensus 29 ~~~I~VLDfg~q~~~---liar~lre~Gv~~~ivp~~~----------------~~e~i~~~~~dGIILsGGp~s~~~-~ 88 (697)
T 2vxo_A 29 EGAVVILDAGAQYGK---VIDRRVRELFVQSEIFPLET----------------PAFAIKEQGFRAIIISGGPNSVYA-E 88 (697)
T ss_dssp CCCEEEEEEC--CHH---HHHHHHHHTTCCEEEEETTC----------------CHHHHHHHTCSEEEEEECC-------
T ss_pred CCEEEEEECCCchHH---HHHHHHHHCCCEEEEEECCC----------------CHHHHhhcCCCEEEECCCCCcccC-c
Confidence 357888866542221 35588899999888886542 123332246899999999642211 1
Q ss_pred cCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhC
Q 023800 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (277)
Q Consensus 240 ~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~a 272 (277)
..+. +.+..++.++||.+||.|.. +|+.+
T Consensus 89 ~~~~---~~~~i~~~g~PvLGIC~G~Q-lLa~~ 117 (697)
T 2vxo_A 89 DAPW---FDPAIFTIGKPVLGICYGMQ-MMNKV 117 (697)
T ss_dssp -CCC---CCGGGTTSSCCEEEEEHHHH-HHHHH
T ss_pred cchh---HHHHHHhCCCCEEEECHHHH-HHHHH
Confidence 1111 12334578999999999999 89863
No 113
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=93.24 E-value=0.19 Score=42.97 Aligned_cols=99 Identities=13% Similarity=0.073 Sum_probs=63.1
Q ss_pred CeEEEEecCCCchhh-HHHHHHHHHhCCC-eEEEEeeCCCceEEcccCcEEEeCcch-hhhccCCccEEEEcCCcch-HH
Q 023800 161 PQILVPIANGSEEME-AVIIIDILRRAKA-NVVVASVADKLEILASCQVKLVADMLI-DEAAKLSYDLIVLPGGLGG-AQ 236 (277)
Q Consensus 161 ~kV~ill~~g~~~~e-~~~~~~~l~~a~~-~v~~vs~~~~~~v~~~~g~~i~~~~~~-~~~~~~~~D~livpGG~~~-~~ 236 (277)
.+|+|+-+-.....+ .....++|++.|+ +++++..... . . ..+..+ +.+ .+.|+|+|+||... ..
T Consensus 57 ~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r-~--~------a~~~~~~~~l--~~ad~I~v~GGnt~~l~ 125 (291)
T 3en0_A 57 AIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDR-A--Q------GDDSGYRLFV--EQCTGIFMTGGDQLRLC 125 (291)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSG-G--G------GGCHHHHHHH--HHCSEEEECCSCHHHHH
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCc-c--c------cCCHHHHHHH--hcCCEEEECCCCHHHHH
Confidence 478887654333322 2345678888888 6777654321 0 0 011111 222 35799999999631 11
Q ss_pred hhhcCHHHHHHHHHHHHcC-CcEEEEchhhHHhhhh
Q 023800 237 AFAKSKKLVNMLKKQKESN-RPYGAICASPALVLEP 271 (277)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~-~~i~aiC~G~~~lLa~ 271 (277)
.......+.+.|++.+++| .++++.|.|+. ++++
T Consensus 126 ~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~-i~~~ 160 (291)
T 3en0_A 126 GLLADTPLMDRIRQRVHNGEISLAGTSAGAA-VMGH 160 (291)
T ss_dssp HHHTTCHHHHHHHHHHHTTSSEEEEETHHHH-TTSS
T ss_pred HHHHhCCHHHHHHHHHHCCCeEEEEeCHHHH-hhhH
Confidence 2234568899999999999 89999999999 7764
No 114
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=92.74 E-value=0.15 Score=47.11 Aligned_cols=75 Identities=19% Similarity=0.222 Sum_probs=48.2
Q ss_pred HHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCC
Q 023800 177 VIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNR 256 (277)
Q Consensus 177 ~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~ 256 (277)
......++++|..+.++..+.. .+++..-.+|.||+|||...... ...+.+ .+..++.++
T Consensus 13 ~~i~r~l~~~G~~~~i~p~~~~----------------~~~i~~~~~dgiIlsGGp~s~~~-~~~~~~---~~~~~~~~~ 72 (503)
T 2ywb_A 13 RLIARRLRELRAFSLILPGDAP----------------LEEVLKHRPQALILSGGPRSVFD-PDAPRP---DPRLFSSGL 72 (503)
T ss_dssp HHHHHHHHTTTCCEEEEETTCC----------------HHHHHTTCCSEEEECCCSSCSSC-TTCCCC---CGGGGCSSC
T ss_pred HHHHHHHHHCCCEEEEEECCCC----------------HHHHHhcCCCEEEECCCCchhcc-CCCcch---HHHHHhCCC
Confidence 5677889999988877754321 23332224699999998642211 011111 134457899
Q ss_pred cEEEEchhhHHhhhhC
Q 023800 257 PYGAICASPALVLEPH 272 (277)
Q Consensus 257 ~i~aiC~G~~~lLa~a 272 (277)
||.+||-|.. +|+.+
T Consensus 73 PvLGIC~G~Q-lla~~ 87 (503)
T 2ywb_A 73 PLLGICYGMQ-LLAQE 87 (503)
T ss_dssp CEEEETHHHH-HHHHT
T ss_pred CEEEECHHHH-HHHHH
Confidence 9999999999 88874
No 115
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=92.60 E-value=0.056 Score=44.28 Aligned_cols=30 Identities=10% Similarity=-0.031 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHhC-CCEEEEEchhHHHHHHHc
Q 023800 61 EVLESIVKKQASD-GRLYAAICVFLAVALGSW 91 (277)
Q Consensus 61 ~~~~~~l~~~~~~-g~~i~aiC~g~~~~La~a 91 (277)
..+.++|+++.++ |++|.+||.|.. +|+.+
T Consensus 66 ~~~~~~i~~~~~~~g~PilGIC~G~Q-lL~~~ 96 (227)
T 2abw_A 66 DTLYNALVHFIHVLKKPIWGTCAGCI-LLSKN 96 (227)
T ss_dssp HHHHHHHHHHHHTSCCCEEEETHHHH-HTEEE
T ss_pred HHHHHHHHHHHHhcCCEEEEECHHHH-HHHHH
Confidence 5689999999999 999999999999 88886
No 116
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=92.60 E-value=0.18 Score=41.67 Aligned_cols=29 Identities=10% Similarity=0.096 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 62 VLESIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 62 ~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
.+.++++++.++++++.+||-|.. +|+.+
T Consensus 81 ~~~~~i~~~~~~~~PiLGIC~G~Q-lL~~a 109 (239)
T 1o1y_A 81 YEFQLIEEILKKEIPFLGICLGSQ-MLAKV 109 (239)
T ss_dssp HHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEchhHH-HHHHH
Confidence 678999999999999999999999 89987
No 117
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=90.13 E-value=0.23 Score=39.68 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=26.2
Q ss_pred HHHHHHHHHhCCCEEEEEchhHHHHHHHcC
Q 023800 63 LESIVKKQASDGRLYAAICVFLAVALGSWG 92 (277)
Q Consensus 63 ~~~~l~~~~~~g~~i~aiC~g~~~~La~aG 92 (277)
+.++|+++.+++++|.+||.|.. +|+.+.
T Consensus 66 ~~~~i~~~~~~~~PilGIC~G~Q-ll~~~~ 94 (201)
T 1gpw_B 66 LIDFVRKHVEDERYVVGVCLGMQ-LLFEES 94 (201)
T ss_dssp CHHHHHHHHHTTCEEEEETHHHH-TTSSEE
T ss_pred HHHHHHHHHHcCCeEEEEChhHH-HHHHhh
Confidence 77899999999999999999999 888864
No 118
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=89.71 E-value=0.29 Score=38.50 Aligned_cols=66 Identities=11% Similarity=0.043 Sum_probs=39.8
Q ss_pred hHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccC---CCccchhc--cccChHHHHHHHHHHhCCCEEEE
Q 023800 5 ITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGATN--LKESEVLESIVKKQASDGRLYAA 79 (277)
Q Consensus 5 ~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~---gG~~~~~~--~~~~~~~~~~l~~~~~~g~~i~a 79 (277)
...+.|++.|+++.+++.. . .+++++.. ||. +... +.....+.++++ +++++|.+
T Consensus 14 ~~~~~l~~~G~~~~~~~~~--~--------------~~~~~dglil~GG~-~~~~~~~~~~~~~~~~i~---~~~~PilG 73 (186)
T 2ywj_A 14 EHEEAIKKAGYEAKKVKRV--E--------------DLEGIDALIIPGGE-STAIGKLMKKYGLLEKIK---NSNLPILG 73 (186)
T ss_dssp HHHHHHHHTTSEEEEECSG--G--------------GGTTCSEEEECCSC-HHHHHHHHHHTTHHHHHH---TCCCCEEE
T ss_pred HHHHHHHHCCCEEEEECCh--H--------------HhccCCEEEECCCC-chhhhhhhhccCHHHHHH---hcCCcEEE
Confidence 3457788888888776531 1 12222221 663 2211 111223455555 78999999
Q ss_pred EchhHHHHHHHc
Q 023800 80 ICVFLAVALGSW 91 (277)
Q Consensus 80 iC~g~~~~La~a 91 (277)
||.|.. +|+.+
T Consensus 74 IC~G~Q-ll~~~ 84 (186)
T 2ywj_A 74 TCAGMV-LLSKG 84 (186)
T ss_dssp ETHHHH-HHSSC
T ss_pred ECHHHH-HHHHH
Confidence 999999 89988
No 119
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=88.75 E-value=0.89 Score=37.77 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 61 EVLESIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
...++++++..+++++|.+||-|.. +|+.+
T Consensus 95 ~~~~~lir~a~~~~~PiLGIC~G~Q-ll~~a 124 (254)
T 3fij_A 95 SYEIALVRAALDAGKPIFAICRGMQ-LVNVA 124 (254)
T ss_dssp HHHHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 4478999999999999999999999 89987
No 120
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=88.11 E-value=0.28 Score=39.64 Aligned_cols=32 Identities=9% Similarity=0.138 Sum_probs=27.4
Q ss_pred cChHHHHHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 59 ESEVLESIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 59 ~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
+...+.+.|++..++|+++.++|.|+. +|+..
T Consensus 98 ~~~gl~~~l~~~~~~G~p~~G~sAGa~-~l~~~ 129 (206)
T 3l4e_A 98 KRTGADKLILEEIAAGKLYIGESAGAV-ITSPN 129 (206)
T ss_dssp HHHTHHHHHHHHHHTTCEEEEETHHHH-TTSSB
T ss_pred HHCChHHHHHHHHHcCCeEEEECHHHH-Hhccc
Confidence 456788899999999999999999998 77653
No 121
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=87.50 E-value=0.13 Score=41.45 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=41.6
Q ss_pred hHHHHHHhCCCeEEEEeeCCCceeecCCCCEEecCccccccccCCCccchhccccChHHHHHHHHHHhCCCEEEEEchhH
Q 023800 5 ITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDACGMPGATNLKESEVLESIVKKQASDGRLYAAICVFL 84 (277)
Q Consensus 5 ~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~l~~~~~~g~~i~aiC~g~ 84 (277)
.....|++.|+++.++... ..+....|+-+ | |+ .........-....+++...+.++||.+||-|-
T Consensus 17 si~~al~~~G~~~~v~~~~--~~l~~~D~lil-P----------G~-g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG~ 82 (211)
T 4gud_A 17 SVKFAIERLGYAVTISRDP--QVVLAADKLFL-P----------GV-GTASEAMKNLTERDLIELVKRVEKPLLGICLGM 82 (211)
T ss_dssp HHHHHHHHTTCCEEEECCH--HHHHHCSEEEE-C----------CC-SCHHHHHHHHHHTTCHHHHHHCCSCEEEETHHH
T ss_pred HHHHHHHHCCCEEEEECCH--HHHhCCCEEEE-C----------CC-CCHHHHHHHHHhcChHHHHHHcCCCEEEEchhH
Confidence 3456788889988875421 12222222222 1 42 112111111222345677778999999999999
Q ss_pred HHHHHHcC
Q 023800 85 AVALGSWG 92 (277)
Q Consensus 85 ~~~La~aG 92 (277)
. +|+.+.
T Consensus 83 Q-lL~~~~ 89 (211)
T 4gud_A 83 Q-LLGKLS 89 (211)
T ss_dssp H-TTSSEE
T ss_pred h-HHHHHh
Confidence 9 888764
No 122
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=86.75 E-value=3.5 Score=34.38 Aligned_cols=83 Identities=10% Similarity=0.009 Sum_probs=53.4
Q ss_pred CCCeEEEEecCCCc-hhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 159 NSPQILVPIANGSE-EMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 159 ~~~kV~ill~~g~~-~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
.|+||+|+ .|.. ......+.+.|+..|++|++++...- + .+.++ ..+||+||++.-. ..
T Consensus 3 ~m~~vLiV--~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~-~------------~~~~~--L~~yDvIIl~d~~--~~- 62 (259)
T 3rht_A 3 AMTRVLYC--GDTSLETAAGYLAGLMTSWQWEFDYIPSHVG-L------------DVGEL--LAKQDLVILSDYP--AE- 62 (259)
T ss_dssp ---CEEEE--ESSCTTTTHHHHHHHHHHTTCCCEEECTTSC-B------------CSSHH--HHTCSEEEEESCC--GG-
T ss_pred CCceEEEE--CCCCchhHHHHHHHHHHhCCceEEEeccccc-c------------cChhH--HhcCCEEEEcCCc--cc-
Confidence 45788888 3432 34556678899999999999876542 1 12233 3579999998522 11
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEc
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAIC 262 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC 262 (277)
.-++...+.|+++.++|.-+..+.
T Consensus 63 -~l~~~~~~~L~~yV~~GGgLi~~g 86 (259)
T 3rht_A 63 -RMTAQAIDQLVTMVKAGCGLVMLG 86 (259)
T ss_dssp -GBCHHHHHHHHHHHHTTCEEEEEC
T ss_pred -cCCHHHHHHHHHHHHhCCeEEEec
Confidence 235677778888888887766663
No 123
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=85.08 E-value=0.83 Score=38.80 Aligned_cols=29 Identities=0% Similarity=-0.198 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHhCCCEEEEEchhHHHHHHH
Q 023800 61 EVLESIVKKQASDGRLYAAICVFLAVALGS 90 (277)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~ 90 (277)
+.+.++++++.+++++|.+||.|.. +|+.
T Consensus 106 ~~~~~~i~~~~~~~~PilGIC~G~Q-~l~~ 134 (289)
T 2v4u_A 106 LGKLQAISWARTKKIPFLGVXLGMQ-LAVI 134 (289)
T ss_dssp HHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred HHHHHHHHHHHHcCCcEEEECccHH-HHHH
Confidence 5788999999999999999999999 8887
No 124
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=82.50 E-value=1.5 Score=35.35 Aligned_cols=21 Identities=14% Similarity=0.066 Sum_probs=18.6
Q ss_pred HHhCCCEEEEEchhHHHHHHHc
Q 023800 70 QASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 70 ~~~~g~~i~aiC~g~~~~La~a 91 (277)
..++++++.+||-|.. +|+.+
T Consensus 81 ~~~~~~PiLGIC~G~Q-ll~~~ 101 (212)
T 2a9v_A 81 IDDHNYPILGICVGAQ-FIALH 101 (212)
T ss_dssp HHHCCSCEEEETHHHH-HHHHH
T ss_pred HHhCCCCEEEEChHHH-HHHHH
Confidence 3578999999999999 89887
No 125
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=82.43 E-value=2.8 Score=39.78 Aligned_cols=29 Identities=17% Similarity=0.377 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 62 VLESIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 62 ~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
.+.+++++..+.+++|.+||-|.. +|+.+
T Consensus 509 ~~~~lI~~a~~~~iPiLGIClG~Q-lLa~a 537 (645)
T 3r75_A 509 RLYAWLRHLIDEGKPFMAVCLSHQ-ILNAI 537 (645)
T ss_dssp HHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECHHHH-HHHHH
Confidence 467888988899999999999999 88875
No 126
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=77.24 E-value=2.1 Score=37.82 Aligned_cols=31 Identities=13% Similarity=0.032 Sum_probs=28.2
Q ss_pred ChHHHHHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 60 SEVLESIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 60 ~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
.....++++++.+++++|.+||-|-. +|+.+
T Consensus 247 ~~~~~~~Ir~~~~~~~PILGIClG~Q-LLa~A 277 (379)
T 1a9x_B 247 CDYAITAIQKFLETDIPVFGICLGHQ-LLALA 277 (379)
T ss_dssp CHHHHHHHHHHTTSCCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECchHH-HHHHH
Confidence 46788999999999999999999999 88886
No 127
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=76.03 E-value=1.3 Score=41.28 Aligned_cols=29 Identities=24% Similarity=0.177 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 62 VLESIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 62 ~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
.+.++|+++.+++++|.+||.|.. +|+.+
T Consensus 67 ~~~~~i~~~~~~g~PiLGIC~G~Q-lL~~a 95 (555)
T 1jvn_A 67 GFEKPIREYIESGKPIMGIXVGLQ-ALFAG 95 (555)
T ss_dssp TCHHHHHHHHHTTCCEEEEEHHHH-TTEEE
T ss_pred cHHHHHHHHHHcCCcEEEEchhhh-hhhhh
Confidence 457899999999999999999999 89986
No 128
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=75.77 E-value=6.5 Score=30.52 Aligned_cols=84 Identities=13% Similarity=0.090 Sum_probs=52.6
Q ss_pred CCeEEEEecCCCchhh--HHHHHHHHHh-CCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH
Q 023800 160 SPQILVPIANGSEEME--AVIIIDILRR-AKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e--~~~~~~~l~~-a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~ 236 (277)
++||.|+.+...--++ .-.+.+.+.. .|.+++++..... . ..++ .++|.|++..-. .
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~-~--------------~~~l--~~aD~ii~gsP~---y 63 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEA-T--------------KEDV--LWADGLAVGSPT---N 63 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTC-C--------------HHHH--HHCSEEEEEEEC---B
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhC-C--------------HHHH--HhCCEEEEEeCc---c
Confidence 4688888876433333 2345666777 7888888876542 1 3333 358988885421 1
Q ss_pred hhhcCHHHHHHHHHHHH------cCCcEEEEch
Q 023800 237 AFAKSKKLVNMLKKQKE------SNRPYGAICA 263 (277)
Q Consensus 237 ~~~~~~~~~~~l~~~~~------~~~~i~aiC~ 263 (277)
...-.+.+.+|+.+... ++|+++.+++
T Consensus 64 ~g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t 96 (188)
T 2ark_A 64 MGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSS 96 (188)
T ss_dssp TTBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEE
T ss_pred CCcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEE
Confidence 22345677888887654 6888888777
No 129
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=73.55 E-value=2.4 Score=35.52 Aligned_cols=29 Identities=3% Similarity=-0.088 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhCCCEEEEEchhHHHHHHH
Q 023800 61 EVLESIVKKQASDGRLYAAICVFLAVALGS 90 (277)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~ 90 (277)
+...++++++.++++++.+||-|.. +|+.
T Consensus 83 ~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~ 111 (273)
T 2w7t_A 83 DGKCAAAQVARMNNIPYFGVXLGMQ-VAVI 111 (273)
T ss_dssp HHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred hhHHHHHHHHHHCCCcEEEECcCHH-HHHH
Confidence 3577889999889999999999999 7876
No 130
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=72.05 E-value=13 Score=28.18 Aligned_cols=106 Identities=15% Similarity=0.105 Sum_probs=65.7
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCC----ceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchH
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADK----LEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~----~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~ 235 (277)
..+|.++=.+|+...=.-....+.| +.+.-++-...- +...+..|+++.-... .+.|+|++-||..-+
T Consensus 26 ~~kIvf~Gs~GvCtPFaeL~~YaiR--~~~~~FiP~~d~e~a~~l~~~~~G~~~~~~~~------~~~D~vVllGGLAMP 97 (157)
T 2r47_A 26 AERIGFAGVPGVCTPFAQLFAYAVR--DKDNIFIPNTDFSKARKLEVTEYGVELGEISP------GNVDVLVLLGGLSMP 97 (157)
T ss_dssp CSEEEEEECTTTTHHHHHHHHHHTT--TSEEEEEETTCGGGCEEEEEETTEEEEEEECC------CCEEEEEEEGGGGST
T ss_pred CCeEEEECCCeeecCHHhhheeeee--CCceEEcCCCChhHceEEEEecCceEeccccC------CCCCEEEEeccccCC
Confidence 5789999999987532222222333 345545533211 1233456777653322 257999999997433
Q ss_pred HhhhcCHHHHHHHHHHHHcCCcEEEEchhhHHhhhhCCCC
Q 023800 236 QAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLL 275 (277)
Q Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~lLa~aGlL 275 (277)
..-...+++.++|.+..+.++.|.+||-=+. +.++|..
T Consensus 98 k~~v~~e~v~~li~ki~~~~~kiiGvCFms~--F~kagW~ 135 (157)
T 2r47_A 98 GIGSDIEDVKKLVEDALEEGGELMGLCYMDM--FARAGWY 135 (157)
T ss_dssp TTSCCHHHHHHHHHHHEEEEEEEEEEEETTH--HHHTTHH
T ss_pred CCCCCHHHHHHHHHHhhcCCCCEEEEEhHHH--HHHcCCC
Confidence 3333456788888888766777999998776 6777743
No 131
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=69.71 E-value=2.2 Score=34.85 Aligned_cols=34 Identities=12% Similarity=-0.041 Sum_probs=28.1
Q ss_pred cChHHHHHHHHHHhCCCEEEEEchhHHHHHHHcCC
Q 023800 59 ESEVLESIVKKQASDGRLYAAICVFLAVALGSWGL 93 (277)
Q Consensus 59 ~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGl 93 (277)
+...+.+.|++..++|+++.++|.|+. +|++...
T Consensus 98 ~~~gl~~~l~~~~~~G~p~~G~sAG~~-~l~~~~~ 131 (229)
T 1fy2_A 98 RERGLLAPMADRVKRGALYIGWSAGAN-LACPTIR 131 (229)
T ss_dssp HHTTCHHHHHHHHHTTCEEEEETHHHH-HTSSBST
T ss_pred HHCChHHHHHHHHHcCCEEEEECHHHH-hhcccce
Confidence 345678889999999999999999998 8877543
No 132
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=69.28 E-value=41 Score=28.06 Aligned_cols=92 Identities=11% Similarity=0.029 Sum_probs=54.3
Q ss_pred CCCeEEEEecCCCchhh--HHHHHHHHHhCC-CeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchH
Q 023800 159 NSPQILVPIANGSEEME--AVIIIDILRRAK-ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e--~~~~~~~l~~a~-~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~ 235 (277)
++.||+|+.-......+ ...+.+.|++.| ++|++...... . .. ...+.+ ...+||+||+--..
T Consensus 3 ~~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~-~-~d--------~~~f~~-~L~~~D~vV~~~~~--- 68 (281)
T 4e5v_A 3 KPIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQ-G-KD--------MSGFVL-DFSPYQLVVLDYNG--- 68 (281)
T ss_dssp CCEEEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCT-T-SC--------CTTCCC-CCTTCSEEEECCCS---
T ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCcc-c-cc--------hhHHhh-hhhcCCEEEEeCCC---
Confidence 34678887554333333 244566667777 89988754311 0 00 011222 24579999964311
Q ss_pred HhhhcCHHHHHHHHHHHHcCCcEEEEchhhH
Q 023800 236 QAFAKSKKLVNMLKKQKESNRPYGAICASPA 266 (277)
Q Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~ 266 (277)
. .-+++..+-|+++.++|.-+.++.+++.
T Consensus 69 ~--~l~~~~~~~l~~yV~~Ggglv~~H~a~~ 97 (281)
T 4e5v_A 69 D--SWPEETNRRFLEYVQNGGGVVIYHAADN 97 (281)
T ss_dssp S--CCCHHHHHHHHHHHHTTCEEEEEGGGGG
T ss_pred C--cCCHHHHHHHHHHHHcCCCEEEEecccc
Confidence 1 1256677788888899999999888654
No 133
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=68.32 E-value=15 Score=28.47 Aligned_cols=100 Identities=13% Similarity=0.067 Sum_probs=53.3
Q ss_pred CCeEEEEecCCCchhh--HHHHHHHHHhCCCeEEEEeeCCCceEEc---ccCc--EEEeCcchhhhccCCccEEEEcCCc
Q 023800 160 SPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADKLEILA---SCQV--KLVADMLIDEAAKLSYDLIVLPGGL 232 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e--~~~~~~~l~~a~~~v~~vs~~~~~~v~~---~~g~--~i~~~~~~~~~~~~~~D~livpGG~ 232 (277)
++||.|+.+....-++ .-.+.+.+...|.+++++..... ...+ .... ...+....+++ ..+|.|++..-.
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l--~~aD~ii~gsP~ 81 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAV-STECEAVAPDIPAEGALYATLEDL--KNCAGLALGSPT 81 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCCE-EC-------------CCBCCHHHH--HTCSEEEEEEEC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhhc-cchhhhhccccccccCchhhHHHH--HHCCEEEEEcCh
Confidence 3588888876433222 33456677778999998876542 1100 0000 00111123333 468999885421
Q ss_pred chHHhhhcCHHHHHHHHHHHH-------cCCcEEEEchhh
Q 023800 233 GGAQAFAKSKKLVNMLKKQKE-------SNRPYGAICASP 265 (277)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~~~~-------~~~~i~aiC~G~ 265 (277)
....-.+.+..||.+... ++|+++.++++.
T Consensus 82 ---y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g 118 (200)
T 2a5l_A 82 ---RFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTA 118 (200)
T ss_dssp ---BTTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBS
T ss_pred ---hccCccHHHHHHHHHHHHHhhccccCCCEEEEEEecC
Confidence 112235566777766432 688888777654
No 134
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=67.69 E-value=23 Score=33.63 Aligned_cols=89 Identities=17% Similarity=0.135 Sum_probs=60.3
Q ss_pred CCCeEEEEecCCCc----------------hhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCC
Q 023800 159 NSPQILVPIANGSE----------------EMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLS 222 (277)
Q Consensus 159 ~~~kV~ill~~g~~----------------~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~ 222 (277)
.+.||+||-.-|-. .....+.+++|+.++++|++++.+-- .. .+ .+++
T Consensus 437 ~~~kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~FIsfdDI---~e------------~e-~L~d 500 (759)
T 2zuv_A 437 GELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDV---LA------------HG-IDSD 500 (759)
T ss_dssp CCSEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEEHHHH---HH------------HC-CCTT
T ss_pred cCceEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEEecHHHh---cc------------cc-cccc
Confidence 34789988764311 12557899999999999999987531 00 02 1468
Q ss_pred ccEEEEcC-Ccc--hHHhhhcCHHHHHHHHHHHHcCCcEEEEch
Q 023800 223 YDLIVLPG-GLG--GAQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (277)
Q Consensus 223 ~D~livpG-G~~--~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~ 263 (277)
||+||-+| ... .....-.++..++.||++..+|.-+.++..
T Consensus 501 ~DVIIn~G~A~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGe 544 (759)
T 2zuv_A 501 IDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGE 544 (759)
T ss_dssp CCEEEEEECTTSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEecCcchhcccCccccCCHHHHHHHHHHHHcCCcEEEeCC
Confidence 99999998 211 011123468999999999999887777653
No 135
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=66.61 E-value=4.5 Score=31.67 Aligned_cols=28 Identities=11% Similarity=0.065 Sum_probs=21.9
Q ss_pred HHHHHHHHHhCCCEEEEEchhHHHHHHHcC
Q 023800 63 LESIVKKQASDGRLYAAICVFLAVALGSWG 92 (277)
Q Consensus 63 ~~~~l~~~~~~g~~i~aiC~g~~~~La~aG 92 (277)
...+++ ..+++++|.+||-|.. +|+.+-
T Consensus 66 ~~~l~~-~~~~~~PilGIC~G~Q-ll~~~~ 93 (192)
T 1i1q_B 66 MPELLT-RLRGKLPIIGICLGHQ-AIVEAY 93 (192)
T ss_dssp HHHHHH-HHBTTBCEEEETHHHH-HHHHHT
T ss_pred HHHHHH-HHhcCCCEEEECcChH-HHHHHh
Confidence 344454 4578999999999999 899874
No 136
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=66.33 E-value=6.5 Score=30.03 Aligned_cols=93 Identities=14% Similarity=0.188 Sum_probs=53.8
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCe--EEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC--CcchH
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKAN--VVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG--GLGGA 235 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~--v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG--G~~~~ 235 (277)
+.||+|+...=....=+.+..+.|.+.|.+ +.++..- ++.-+++........ .+||+||.-| |...-
T Consensus 2 ~~ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VP------GafEiP~aak~la~~---~~yDavIaLG~VG~T~H 72 (156)
T 2b99_A 2 TKKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVP------GIKDLPVACKKLLEE---EGCDIVMALGMPGKAEK 72 (156)
T ss_dssp CCEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEES------SGGGHHHHHHHHHHH---SCCSEEEEEECCCSSHH
T ss_pred CcEEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECC------cHHHHHHHHHHHHhc---CCCCEEEEecccCCcch
Confidence 468999986422233357899999998853 3334333 334444443333222 4799998776 32222
Q ss_pred HhhhcCHHHHHHHHHHHHcCCcEEEE
Q 023800 236 QAFAKSKKLVNMLKKQKESNRPYGAI 261 (277)
Q Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~i~ai 261 (277)
..+-.+.-.....+-..+.++||+.-
T Consensus 73 fd~Va~~vs~Gl~~v~L~~~vPV~~g 98 (156)
T 2b99_A 73 DKVCAHEASLGLMLAQLMTNKHIIEV 98 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHHHHHHHHHHhhhCCCEEEE
Confidence 33334444555556677888888754
No 137
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=65.90 E-value=14 Score=27.85 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=48.3
Q ss_pred CeEEEEecCCC--chhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 161 PQILVPIANGS--EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 161 ~kV~ill~~g~--~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
+||.|+-+... ...=.-.+.+.+...|.+++++..... . ++....++ .+||.|++...... ...
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~-~----------~~~~~~~~--~~~d~ii~Gspty~-g~~ 66 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRAV-D----------PQELIEAV--SSARGIVLGTPPSQ-PSE 66 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTTC-C----------HHHHHHHH--HHCSEEEEECCBSS-CCH
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HhCCEEEEEcCCcC-Cch
Confidence 36777766543 222234466778888888888866532 0 01111222 35898888653211 111
Q ss_pred hcCHHHHHHHHHHHHcCCcEEEEchhhH
Q 023800 239 AKSKKLVNMLKKQKESNRPYGAICASPA 266 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~ 266 (277)
+. ..+.+.+....-++|+++.++++.+
T Consensus 67 p~-~~fl~~l~~~~l~gk~v~~fgs~g~ 93 (161)
T 3hly_A 67 AV-ATALSTIFAAAHNKQAIGLFDSYGG 93 (161)
T ss_dssp HH-HHHHHHHHHHCCTTSEEEEECCCCS
T ss_pred hH-HHHHHHHHhhhhCCCEEEEEEcCCC
Confidence 11 2333333332237899999988765
No 138
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=64.61 E-value=33 Score=24.73 Aligned_cols=63 Identities=11% Similarity=0.017 Sum_probs=38.9
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEc
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLP 229 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livp 229 (277)
++++|+++=...-...--..++..|...||++.-|.++.+ .+ .|.+.. .++++++ + .|+++|.
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~-~i---~G~~~y--~sl~dlp-~-vDlavi~ 65 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKG-EV---LGKTII--NERPVIE-G-VDTVTLY 65 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCS-EE---TTEECB--CSCCCCT-T-CCEEEEC
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCC-cC---CCeecc--CChHHCC-C-CCEEEEE
Confidence 4578888855432222234567778888999999988876 44 344333 3455554 3 6777664
No 139
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=62.88 E-value=25 Score=26.41 Aligned_cols=92 Identities=12% Similarity=0.022 Sum_probs=51.4
Q ss_pred CeEEEEecCCCchhh--HHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 161 PQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 161 ~kV~ill~~g~~~~e--~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
++|.|+-+...--++ .-.+.+.++..|.+++++..... + .++....++ .++|.|++...... ..+
T Consensus 5 ~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~-~---------~~~~~~~~~--~~~d~ii~Gspty~-g~~ 71 (159)
T 3fni_A 5 TSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAA-V---------DLQELRELV--GRCTGLVIGMSPAA-SAA 71 (159)
T ss_dssp CEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSC-C---------CHHHHHHHH--HTEEEEEEECCBTT-SHH
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCc-C---------CHHHHHHHH--HhCCEEEEEcCcCC-CCc
Confidence 578888775433333 34567778888999888866431 0 011112232 46899988653221 112
Q ss_pred hcCHHHHHHHHHHHHcCCcEEEEchhhH
Q 023800 239 AKSKKLVNMLKKQKESNRPYGAICASPA 266 (277)
Q Consensus 239 ~~~~~~~~~l~~~~~~~~~i~aiC~G~~ 266 (277)
+ ...+.+.+....-.+|+++.++++.+
T Consensus 72 p-~~~~l~~l~~~~~~~k~va~fgs~g~ 98 (159)
T 3fni_A 72 S-IQGALSTILGSVNEKQAVGIFETGGG 98 (159)
T ss_dssp H-HHHHHHHHHHHCCTTSEEEEECCSSS
T ss_pred c-HHHHHHHHHhhcccCCEEEEEEcCCC
Confidence 2 13344444333347899999988654
No 140
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=62.00 E-value=15 Score=29.74 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=43.7
Q ss_pred CeEEEEecC----CC---chhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEc
Q 023800 161 PQILVPIAN----GS---EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLP 229 (277)
Q Consensus 161 ~kV~ill~~----g~---~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livp 229 (277)
+||+|+-.- || ..+|.....+.++..|..|+++|.+.+ |. ...++++++..||-++|.
T Consensus 1 mkiai~n~gnni~~fkt~p~setiyl~~~~~~mgl~vd~is~k~~--iy---------~~~fd~vd~n~ydr~~vv 65 (351)
T 1jg7_A 1 MKIAIINMGNNVINFKTVPSSETIYLFKVISEMGLNVDIISLKNG--VY---------TKSFDEVDVNDYDRLIVV 65 (351)
T ss_dssp CCEEEEESSSCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEESSCC--SS---------EEEGGGSCGGGCSEEEEE
T ss_pred CceEEEecCCccccceecCccceeeHHHHHHHcCCCeeEEEeccc--ee---------eeecccCCccccceEEEE
Confidence 356776542 23 357788889999999999999999875 21 235778888899999886
No 141
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=61.69 E-value=18 Score=27.53 Aligned_cols=92 Identities=18% Similarity=0.207 Sum_probs=55.8
Q ss_pred CCCeEEEEecCCCch---hhHHHHHHHHHhCC-C---eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC-
Q 023800 159 NSPQILVPIANGSEE---MEAVIIIDILRRAK-A---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG- 230 (277)
Q Consensus 159 ~~~kV~ill~~g~~~---~e~~~~~~~l~~a~-~---~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG- 230 (277)
...||+|+...=... .=+.+..+.|.+.| . +++++..-|. .-+++........ .+||+++.-|
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGa------fEiP~aa~~la~~---~~yDavIaLG~ 81 (156)
T 3nq4_A 11 PDARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGA------YELPLATEALAKS---GKYDAVVALGT 81 (156)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESST------TTHHHHHHHHHHH---CSCSEEEEEEE
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcH------HHHHHHHHHHHhc---CCCCEEEEeee
Confidence 347899998753322 33678999999999 4 6888866553 3333333333222 4699998765
Q ss_pred ---CcchHHhhhcCHHHHHHHHHHHHcCCcEE
Q 023800 231 ---GLGGAQAFAKSKKLVNMLKKQKESNRPYG 259 (277)
Q Consensus 231 ---G~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 259 (277)
|...-..+-.+.-.....+-..+.++||+
T Consensus 82 VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~ 113 (156)
T 3nq4_A 82 VIRGGTAHFEYVAGGASNGLASVAQDSGVPVA 113 (156)
T ss_dssp EECCSSTHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred eecCCchHHHHHHHHHHHHHHHHHhccCCCEE
Confidence 32223333444445555566677788865
No 142
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=61.40 E-value=18 Score=28.27 Aligned_cols=102 Identities=10% Similarity=0.079 Sum_probs=54.0
Q ss_pred CCCeEEEEecCCCchhh--HHHHHHHHHhCCCeEEEEeeCCCce--EEcccCcEE-----E---eCcchhhhccCCccEE
Q 023800 159 NSPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADKLE--ILASCQVKL-----V---ADMLIDEAAKLSYDLI 226 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e--~~~~~~~l~~a~~~v~~vs~~~~~~--v~~~~g~~i-----~---~~~~~~~~~~~~~D~l 226 (277)
.++||+|+.+....-++ .-.+.+.+...|.+++++......+ ..+..+..- . +....+++ ..+|.|
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l--~~aD~i 82 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEATPADL--EWAEAI 82 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBCCHHHH--HHCSEE
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEeccccccchhhhcccccccccccccchhHHHHHHH--HHCCEE
Confidence 45789888875432222 3445667777899999887654200 000001000 0 11223333 468999
Q ss_pred EEcCCcchHHhhhcCHHHHHHHHHHH-------HcCCcEEEEchhh
Q 023800 227 VLPGGLGGAQAFAKSKKLVNMLKKQK-------ESNRPYGAICASP 265 (277)
Q Consensus 227 ivpGG~~~~~~~~~~~~~~~~l~~~~-------~~~~~i~aiC~G~ 265 (277)
|+..-. ....-.+.+..||.+.. -++|+++.++++.
T Consensus 83 i~gsP~---y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g 125 (211)
T 1ydg_A 83 VFSSPT---RFGGATSQMRAFIDTLGGLWSSGKLANKTFSAMTSAQ 125 (211)
T ss_dssp EEEEEE---ETTEECHHHHHHHHTTHHHHHTTTTTTCEEEEEEEES
T ss_pred EEEcCc---cccCccHHHHHHHHHhccccccccCCCCEEEEEEeCC
Confidence 886421 11233556777776643 2578877766543
No 143
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=60.04 E-value=8.1 Score=33.01 Aligned_cols=30 Identities=13% Similarity=0.188 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHhCC--CEEEEEchhHHHHHHHc
Q 023800 61 EVLESIVKKQASDG--RLYAAICVFLAVALGSW 91 (277)
Q Consensus 61 ~~~~~~l~~~~~~g--~~i~aiC~g~~~~La~a 91 (277)
..+.++++++.++| ++|.+||-|.. +|+.+
T Consensus 109 ~~l~~~~~~~~~~g~~~PiLGIC~G~Q-ll~~a 140 (315)
T 1l9x_A 109 KIFYNLSIQSFDDGDYFPVWGTCLGFE-ELSLL 140 (315)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEChHHH-HHHHH
Confidence 35677777776665 99999999999 88874
No 144
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=58.60 E-value=34 Score=28.89 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=47.8
Q ss_pred CCCeEEEEecCCCch--hhHHHHHHHHHhCCCeEEEEeeCCCceEE--c-------ccCcEEEeCcchhhhccCCccEEE
Q 023800 159 NSPQILVPIANGSEE--MEAVIIIDILRRAKANVVVASVADKLEIL--A-------SCQVKLVADMLIDEAAKLSYDLIV 227 (277)
Q Consensus 159 ~~~kV~ill~~g~~~--~e~~~~~~~l~~a~~~v~~vs~~~~~~v~--~-------~~g~~i~~~~~~~~~~~~~~D~li 227 (277)
+++||+|+.-++-.. ..+....+.|+..|+++.+...... ... . ..|..+.. ..-.+....++|+++
T Consensus 3 ~m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~d~vi 80 (307)
T 1u0t_A 3 AHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAV-DRGSLHLAPDDMRAMGVEIEV-VDADQHAADGCELVL 80 (307)
T ss_dssp --CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CCCEE
T ss_pred CCCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh-hhhcccccccccccccccccc-cccccccccCCCEEE
Confidence 357899888765322 2255677888899999877644432 110 0 00100110 000111234689999
Q ss_pred EcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhhH
Q 023800 228 LPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPA 266 (277)
Q Consensus 228 vpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~ 266 (277)
+.||.+ -+...++.+...+.++.+|-.|..
T Consensus 81 ~~GGDG---------T~l~a~~~~~~~~~pvlgi~~G~~ 110 (307)
T 1u0t_A 81 VLGGDG---------TFLRAAELARNASIPVLGVNLGRI 110 (307)
T ss_dssp EEECHH---------HHHHHHHHHHHHTCCEEEEECSSC
T ss_pred EEeCCH---------HHHHHHHHhccCCCCEEEEeCCCC
Confidence 999964 223444444555788888866653
No 145
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=57.80 E-value=11 Score=35.03 Aligned_cols=26 Identities=8% Similarity=0.034 Sum_probs=21.2
Q ss_pred HHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 65 SIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 65 ~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
.+++.+.++|+++.+||-|.. +|+.+
T Consensus 74 ~l~~~a~~~g~PvLGIC~G~Q-lLa~~ 99 (556)
T 3uow_A 74 EVFEYFLEKKIPIFGICYGMQ-EIAVQ 99 (556)
T ss_dssp HHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred HHHHHhhhcCCCEEEECHHHH-HHHHH
Confidence 445556678999999999999 88875
No 146
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=55.93 E-value=93 Score=26.28 Aligned_cols=97 Identities=10% Similarity=0.052 Sum_probs=59.7
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEc----------ccCcEEEeCcchhhhccCCccEEEEc-
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILA----------SCQVKLVADMLIDEAAKLSYDLIVLP- 229 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~----------~~g~~i~~~~~~~~~~~~~~D~livp- 229 (277)
.+|.|++-+|-+--+-......|...|++|.++-+... .... ..|..+.+.. .++....+|+||=.
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~-~~~~~a~~~~~~~~~~g~~~~~~~--~~l~~~~~dlIIDAL 209 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFV-KMLESITNELSLFSKTQGQQVSSL--KDLPTSPVDLVINCL 209 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCS-SCCHHHHHHHHHHHTSSCEEESCS--TTSCSSCCSEEEEEC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCC-CCCHHHHHHHHHHHHcCCccccch--hhhccCCCCEEEECC
Confidence 58999999999999999999999999999999865432 1111 1244443211 11110234544311
Q ss_pred C-CcchHHhhhcCHHHHHHHHHHHHcCCcEEEEc
Q 023800 230 G-GLGGAQAFAKSKKLVNMLKKQKESNRPYGAIC 262 (277)
Q Consensus 230 G-G~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC 262 (277)
| |. ...++....+.++|+...+.+.+|.||-
T Consensus 210 G~G~--~~~l~~~~~~~~lI~~iN~~~~~VvAVD 241 (306)
T 3d3j_A 210 DCPE--NVFLRDQPWYKAAVAWANQNRAPVLSID 241 (306)
T ss_dssp CCTT--CGGGGGCHHHHHHHHHHHHSCCCEEEES
T ss_pred CCCC--CCccCcchHHHHHHHHHHhcCCCEEEEE
Confidence 3 32 1223222567777777777888998874
No 147
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=55.49 E-value=21 Score=27.13 Aligned_cols=94 Identities=15% Similarity=0.119 Sum_probs=56.0
Q ss_pred CCCeEEEEecCCCch---hhHHHHHHHHHhCCC---eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC--
Q 023800 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG-- 230 (277)
Q Consensus 159 ~~~kV~ill~~g~~~---~e~~~~~~~l~~a~~---~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG-- 230 (277)
+..||+|+...=... .=+.+..+.|.+.|. +++++..-|. .-+++....... ..+||+++.-|
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGa------fEiP~aa~~la~---~~~yDavIaLG~V 81 (154)
T 1rvv_A 11 TGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGA------FEIPFAAKKMAE---TKKYDAIITLGTV 81 (154)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSG------GGHHHHHHHHHH---TSCCSEEEEEEEE
T ss_pred CCCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHHHHHh---cCCCCEEEEeeee
Confidence 346899998653222 346788999999985 4677755443 333333332222 24699998765
Q ss_pred --CcchHHhhhcCHHHHHHHHHHHHcCCcEEEE
Q 023800 231 --GLGGAQAFAKSKKLVNMLKKQKESNRPYGAI 261 (277)
Q Consensus 231 --G~~~~~~~~~~~~~~~~l~~~~~~~~~i~ai 261 (277)
|...-..+-.+.-.....+-..+.++||+.-
T Consensus 82 IrG~T~Hfd~V~~~vs~Gl~~v~l~~~vPV~~G 114 (154)
T 1rvv_A 82 IRGATTHYDYVCNEAAKGIAQAANTTGVPVIFG 114 (154)
T ss_dssp ECCSSSHHHHHHHHHHHHHHHHHHHHCSCEEEE
T ss_pred ecCCchHHHHHHHHHHHHHHHHHhhhCCCEEEE
Confidence 3222333444555555666677888887653
No 148
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=55.25 E-value=21 Score=27.06 Aligned_cols=94 Identities=14% Similarity=0.110 Sum_probs=55.9
Q ss_pred CCCeEEEEecCCCch---hhHHHHHHHHHhCCC---eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC--
Q 023800 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG-- 230 (277)
Q Consensus 159 ~~~kV~ill~~g~~~---~e~~~~~~~l~~a~~---~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG-- 230 (277)
+..||+|+...=... .=+.+..+.|.+.|. +++++..-|. .-+++....... ..+||+++.-|
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGa------fEiP~aa~~la~---~~~yDavIalG~V 81 (154)
T 1hqk_A 11 EGLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGS------WEIPVAAGELAR---KEDIDAVIAIGVL 81 (154)
T ss_dssp TTCCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSG------GGHHHHHHHHHT---CTTCCEEEEEEEE
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHHHHHh---cCCCCEEEEeeee
Confidence 346899998753222 346788999999985 5677755543 333333322222 24699998765
Q ss_pred --CcchHHhhhcCHHHHHHHHHHHHcCCcEEEE
Q 023800 231 --GLGGAQAFAKSKKLVNMLKKQKESNRPYGAI 261 (277)
Q Consensus 231 --G~~~~~~~~~~~~~~~~l~~~~~~~~~i~ai 261 (277)
|...-..+-.+.-.....+-..+.++||+.-
T Consensus 82 IrG~T~Hfd~Va~~vs~gl~~v~l~~~vPV~~G 114 (154)
T 1hqk_A 82 IRGATPHFDYIASEVSKGLANLSLELRKPITFG 114 (154)
T ss_dssp ECCSSTHHHHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred ecCCchHHHHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 3222333444555555666677888887653
No 149
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=54.60 E-value=38 Score=27.76 Aligned_cols=71 Identities=11% Similarity=0.124 Sum_probs=45.0
Q ss_pred HHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHcCCcE
Q 023800 179 IIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPY 258 (277)
Q Consensus 179 ~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i 258 (277)
+.+.|+..+++|++.+.+.. ...+++-...+||+||.-|-.. .. .-+++..+-++++.++|+-+
T Consensus 37 i~~~L~~~gf~V~~~t~dd~-------------~~~~~~~~L~~~DvvV~~~~~~-~~--~l~~~~~~al~~~V~~GgG~ 100 (252)
T 1t0b_A 37 IASYLAEAGFDAATAVLDEP-------------EHGLTDEVLDRCDVLVWWGHIA-HD--EVKDEVVERVHRRVLEGMGL 100 (252)
T ss_dssp HHHHHHHTTCEEEEEESSSG-------------GGGCCHHHHHTCSEEEEECSSC-GG--GSCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhhCCcEEEEEeccCc-------------cccCCHhHHhcCCEEEEecCCC-CC--cCCHHHHHHHHHHHHcCCCE
Confidence 47888889999998874321 1112211235799999843111 11 13566777888888999998
Q ss_pred EEEchhh
Q 023800 259 GAICASP 265 (277)
Q Consensus 259 ~aiC~G~ 265 (277)
.++-+|.
T Consensus 101 vgiH~a~ 107 (252)
T 1t0b_A 101 IVLHSGH 107 (252)
T ss_dssp EEEGGGG
T ss_pred EEEcccC
Confidence 8886653
No 150
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=52.69 E-value=23 Score=30.22 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=35.9
Q ss_pred CCeEEEEecCCC---ch-hhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcc
Q 023800 160 SPQILVPIANGS---EE-MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLG 233 (277)
Q Consensus 160 ~~kV~ill~~g~---~~-~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~ 233 (277)
++|++|++-|.- .. ..+......|+.+|+++.+...+...... ....+.....+|.|++.||.+
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~----------~~~~~~~~~~~d~vvv~GGDG 91 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDAT----------LEAERAMHENYDVLIAAGGDG 91 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHH----------HHHHHHTTTTCSEEEEEECHH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHH----------HHHHHHhhcCCCEEEEEcCch
Confidence 357888876632 12 22456778888999988877544320000 001112224578888888754
No 151
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=52.57 E-value=20 Score=30.09 Aligned_cols=72 Identities=22% Similarity=0.293 Sum_probs=46.7
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhc
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~ 240 (277)
+||+|+.-++-. .....+.|+..|+++.+...... .+ .+.|++++-||.+.
T Consensus 30 mki~iv~~~~~~---~~~l~~~L~~~g~~v~~~~~~~~---------------~~-----~~~DlvIvlGGDGT------ 80 (278)
T 1z0s_A 30 MRAAVVYKTDGH---VKRIEEALKRLEVEVELFNQPSE---------------EL-----ENFDFIVSVGGDGT------ 80 (278)
T ss_dssp CEEEEEESSSTT---HHHHHHHHHHTTCEEEEESSCCG---------------GG-----GGSSEEEEEECHHH------
T ss_pred eEEEEEeCCcHH---HHHHHHHHHHCCCEEEEcccccc---------------cc-----CCCCEEEEECCCHH------
Confidence 578888766544 56678889999999876432211 11 24799999999641
Q ss_pred CHHHHHHHHHHHHcCCcEEEEchhh
Q 023800 241 SKKLVNMLKKQKESNRPYGAICASP 265 (277)
Q Consensus 241 ~~~~~~~l~~~~~~~~~i~aiC~G~ 265 (277)
++...+.+... .+|.+|-.|.
T Consensus 81 ---~L~aa~~~~~~-~PilGIN~G~ 101 (278)
T 1z0s_A 81 ---ILRILQKLKRC-PPIFGINTGR 101 (278)
T ss_dssp ---HHHHHTTCSSC-CCEEEEECSS
T ss_pred ---HHHHHHHhCCC-CcEEEECCCC
Confidence 22333333344 8899998876
No 152
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=52.22 E-value=34 Score=29.86 Aligned_cols=91 Identities=10% Similarity=0.052 Sum_probs=54.3
Q ss_pred CCeEEEEecCCCchhh--HHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 160 SPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e--~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
++||.|+.+...--++ .-.+.+.+...|.+++++..... . ......++ .++|.|++..-.. .
T Consensus 256 ~~kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~-~----------~~~~~~~l--~~~D~iiigsP~y---~ 319 (414)
T 2q9u_A 256 QKKVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSS-D----------ITKVALHT--YDSGAVAFASPTL---N 319 (414)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGC-C----------HHHHHHHH--HTCSEEEEECCCB---T
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcC-C----------HHHHHHHH--HhCCEEEEEcCcc---C
Confidence 4788888876543333 23466667778888888865432 1 01111233 4689999975321 1
Q ss_pred hhcCHHHHHHHHHHHH----cCCcEEEEchhhH
Q 023800 238 FAKSKKLVNMLKKQKE----SNRPYGAICASPA 266 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~----~~~~i~aiC~G~~ 266 (277)
....+.+..|+.+... ++|+++.+|++..
T Consensus 320 ~~~~~~~k~fld~l~~~~~~~~K~~~~~~t~g~ 352 (414)
T 2q9u_A 320 NTMMPSVAAALNYVRGLTLIKGKPAFAFGAFGW 352 (414)
T ss_dssp TBCCHHHHHHHHHHHHHTTTTTSBEEEEEEESS
T ss_pred cCchHHHHHHHHHHHhhcccCCCEEEEEEecCC
Confidence 2234556667766543 7899998887654
No 153
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=51.37 E-value=25 Score=26.84 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=54.4
Q ss_pred CCCeEEEEecCCCch---hhHHHHHHHHHhCCC-eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC----
Q 023800 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA-NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG---- 230 (277)
Q Consensus 159 ~~~kV~ill~~g~~~---~e~~~~~~~l~~a~~-~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG---- 230 (277)
...||+|+...=... .=+.+..+.|.+.|. +++++..-|. .-+++...... ..||+|+.-|
T Consensus 16 ~~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGa------fEiP~aak~la-----~~yDavIaLG~VIr 84 (160)
T 2c92_A 16 SGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGA------IEIPVVAQELA-----RNHDAVVALGVVIR 84 (160)
T ss_dssp TTCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSG------GGHHHHHHHHH-----TSCSEEEEEEEEEC
T ss_pred CCCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcH------HHHHHHHHHHH-----hcCCEEEEEeeeec
Confidence 347899998753222 346788999999987 5666654442 33333222211 2599988765
Q ss_pred CcchHHhhhcCHHHHHHHHHHHHcCCcEEEE
Q 023800 231 GLGGAQAFAKSKKLVNMLKKQKESNRPYGAI 261 (277)
Q Consensus 231 G~~~~~~~~~~~~~~~~l~~~~~~~~~i~ai 261 (277)
|...-..+-.+.-.....+-..+.++||+.-
T Consensus 85 G~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~G 115 (160)
T 2c92_A 85 GQTPHFDYVCDAVTQGLTRVSLDSSTPIANG 115 (160)
T ss_dssp CSSTHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCchHHHHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 3222333444555555666677888887653
No 154
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=50.74 E-value=31 Score=26.26 Aligned_cols=94 Identities=17% Similarity=0.126 Sum_probs=54.6
Q ss_pred CeEEEEecCCCch---hhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhh--hccCCccEEEEcC----C
Q 023800 161 PQILVPIANGSEE---MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDE--AAKLSYDLIVLPG----G 231 (277)
Q Consensus 161 ~kV~ill~~g~~~---~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~--~~~~~~D~livpG----G 231 (277)
.||+|+...=... .=+.+..+.|.+.|.+++++..-|. .-+++........ ....+||+++.-| |
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGa------fEiP~aa~~la~~~~~~~~~yDavIaLG~VIrG 86 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGA------LEIPATISFALDGADNGGTEYDGFVALGTVIRG 86 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSG------GGHHHHHHHHHHHHHTTCCCCSEEEEEEEEECC
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------HHHHHHHHHHHhhccccCCCCCEEEEeeeeecC
Confidence 6899998753222 3467899999999988888866543 3333332222211 0114699998765 3
Q ss_pred cchHHhhhcCHHHHHHHHHHHHcCCcEEE
Q 023800 232 LGGAQAFAKSKKLVNMLKKQKESNRPYGA 260 (277)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~a 260 (277)
...-...-.+.-.....+-..+.++||+.
T Consensus 87 ~T~Hfd~Va~~v~~gl~~vsl~~~vPV~~ 115 (157)
T 2i0f_A 87 ETYHFDIVSNESCRALTDLSVEESIAIGN 115 (157)
T ss_dssp SSSTTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 22222233344444555556788888753
No 155
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=50.74 E-value=17 Score=26.67 Aligned_cols=87 Identities=11% Similarity=0.269 Sum_probs=48.3
Q ss_pred CeEEEEecCCCchhh-H-HHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccC-CccEEEEcCCcchHHh
Q 023800 161 PQILVPIANGSEEME-A-VIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKL-SYDLIVLPGGLGGAQA 237 (277)
Q Consensus 161 ~kV~ill~~g~~~~e-~-~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~-~~D~livpGG~~~~~~ 237 (277)
+||.|+.+...--++ + -.+.+.+...|++++++....- ...++ . ++|.|++.........
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~~d~ii~g~pty~~~~ 64 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA---------------SAENL--ADGYDAVLFGCSAWGMED 64 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB---------------CCTTT--TTTCSEEEEEECEECSSS
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC---------------CHhHh--cccCCEEEEEecccCCCC
Confidence 578888765432222 2 3355667778889888876532 11222 3 6888877542211000
Q ss_pred hhcCHHHHHHHHHHHH---cCCcEEEEchh
Q 023800 238 FAKSKKLVNMLKKQKE---SNRPYGAICAS 264 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~---~~~~i~aiC~G 264 (277)
-..++.+.+|+.+... +++.++.+++|
T Consensus 65 G~~p~~~~~fl~~l~~~~l~~k~~~vfg~G 94 (148)
T 3f6r_A 65 LEMQDDFLSLFEEFDRIGLAGRKVAAFASG 94 (148)
T ss_dssp CEECHHHHHHHTTGGGTCCTTCEEEEEEEE
T ss_pred CCCcHHHHHHHHHhhccCCCCCEEEEEEeC
Confidence 0124456666665432 57888888775
No 156
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=49.60 E-value=47 Score=31.50 Aligned_cols=64 Identities=11% Similarity=0.128 Sum_probs=47.0
Q ss_pred hHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHc
Q 023800 175 EAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKES 254 (277)
Q Consensus 175 e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~ 254 (277)
++...+.+|.+.|+.+++++++. + .+.|++||+|.-. .-.+++.+.|+++.++
T Consensus 426 ~~~~~y~aL~~~gi~vD~v~~~~-------------------d--L~~Yklvv~P~~~------~~~~~~~~~L~~yV~~ 478 (675)
T 3tty_A 426 EVHKYYDALYKQNIQTDMISVEE-------------------D--LSKYKVVIAPVMY------MVKPGFAERVERFVAQ 478 (675)
T ss_dssp HHHHHHHHHHTTTCCEEEECTTS-------------------C--CTTCSEEEETTCC------BCCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCceEEEecCcC-------------------C--cccCCEEEEeccE------ecCHHHHHHHHHHHhc
Confidence 46788999999999999997652 1 2479999999753 2356778888988887
Q ss_pred CCc-EEEEchhh
Q 023800 255 NRP-YGAICASP 265 (277)
Q Consensus 255 ~~~-i~aiC~G~ 265 (277)
|.. |++-++|.
T Consensus 479 GG~lv~t~~sG~ 490 (675)
T 3tty_A 479 GGTFVTTFFSGI 490 (675)
T ss_dssp TCEEEEETTCSC
T ss_pred CCEEEEEccCCc
Confidence 655 55555554
No 157
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=48.69 E-value=20 Score=27.28 Aligned_cols=93 Identities=17% Similarity=0.097 Sum_probs=54.2
Q ss_pred CCCeEEEEecCCCch---hhHHHHHHHHHhCCC--eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC---
Q 023800 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA--NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG--- 230 (277)
Q Consensus 159 ~~~kV~ill~~g~~~---~e~~~~~~~l~~a~~--~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG--- 230 (277)
...||+|+...=... .=+.+..+.|.+.|. +++++..-|. .-+++....... ..+||+++.-|
T Consensus 12 ~~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGa------fEiP~aa~~la~---~~~yDavIaLG~VI 82 (156)
T 1c2y_A 12 QSFRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGA------YELGVTAQALGK---SGKYHAIVCLGAVV 82 (156)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSH------HHHHHHHHHHHH---TTCCSEEEEEEECC
T ss_pred CCCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcH------HHHHHHHHHHHh---cCCCCEEEEecccc
Confidence 346899998753222 346788999999985 5666655442 223333222222 24799998775
Q ss_pred -CcchHHhhhcCHHHHHHHHHHHHcCCcEEE
Q 023800 231 -GLGGAQAFAKSKKLVNMLKKQKESNRPYGA 260 (277)
Q Consensus 231 -G~~~~~~~~~~~~~~~~l~~~~~~~~~i~a 260 (277)
|...-..+-.+.-.....+-..+.++||+.
T Consensus 83 rG~T~Hfd~Va~~v~~gl~~v~L~~~vPV~~ 113 (156)
T 1c2y_A 83 KGDTSHYDAVVNSASSGVLSAGLNSGVPCVF 113 (156)
T ss_dssp CCSSTHHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 322223333444455555666778888753
No 158
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=48.02 E-value=17 Score=33.61 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHhCCCEEEEEchhHHHHHHH
Q 023800 61 EVLESIVKKQASDGRLYAAICVFLAVALGS 90 (277)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~ 90 (277)
+...++++++.++++++.+||-|-. +|+.
T Consensus 359 ~g~~~~i~~a~~~~~PiLGIClG~Q-ll~v 387 (545)
T 1s1m_A 359 EGMITTARFARENNIPYLGICLGMQ-VALI 387 (545)
T ss_dssp HHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred hhhHHHHHHHHHCCCcEEEECChHH-HHHH
Confidence 5677889999999999999999999 7875
No 159
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=47.86 E-value=69 Score=25.08 Aligned_cols=60 Identities=13% Similarity=0.187 Sum_probs=41.2
Q ss_pred CeEEEEecCC-CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCc
Q 023800 161 PQILVPIANG-SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL 232 (277)
Q Consensus 161 ~kV~ill~~g-~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~ 232 (277)
.+|.+...+| ..+.........|+.+||++...+.+- .++...+.+...++|+|.+..-.
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~v------------p~~~l~~~~~~~~~d~v~lS~~~ 149 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDI------------EPGKFVEAVKKYQPDIVGMSALL 149 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSB------------CHHHHHHHHHHHCCSEEEEECCS
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCC------------CHHHHHHHHHHcCCCEEEEeccc
Confidence 4677776664 667888899999999999998886532 22333333333567888887653
No 160
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=47.33 E-value=53 Score=26.88 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=41.0
Q ss_pred CCeEEEEecCC-CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCC
Q 023800 160 SPQILVPIANG-SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (277)
Q Consensus 160 ~~kV~ill~~g-~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG 231 (277)
..+|.+...+| ..+.........|+..||+|...+.+- .++.....+...++|+|.+...
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~v------------p~e~l~~~~~~~~~d~V~lS~l 183 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDV------------PAEEVLAAVQKEKPIMLTGTAL 183 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEEC------------CSHHHHHHHHHHCCSEEEEECC
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC------------CHHHHHHHHHHcCCCEEEEEee
Confidence 35777777664 567888889999999999999887642 1222223333346788887764
No 161
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=47.15 E-value=1.2e+02 Score=24.90 Aligned_cols=97 Identities=10% Similarity=0.052 Sum_probs=58.5
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEc----------ccCcEEEeCcchhhhccCCccEEEEc-
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILA----------SCQVKLVADMLIDEAAKLSYDLIVLP- 229 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~----------~~g~~i~~~~~~~~~~~~~~D~livp- 229 (277)
.+|.|++-+|-+--|-......|...|++|+++-.... .... ..|..+.... .+.....+|+||=.
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~-~~~~~a~~~~~~~~~~g~~~~~~~--~~l~~~~~dlIVDAL 162 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFV-KMLESITNELSLFSKTQGQQVSSL--KDLPTSPVDLVINCL 162 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCBCS-SCCHHHHHHHHHHTTSSCEEESCG--GGSCSSCCSEEEEEC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEecCC-CCCHHHHHHHHHHHHcCCCcccch--hhhccCCCCEEEECC
Confidence 58999999999999999999999999999999865432 1111 1244443211 11110134544311
Q ss_pred C-CcchHHhhhcCHHHHHHHHHHHHcCCcEEEEc
Q 023800 230 G-GLGGAQAFAKSKKLVNMLKKQKESNRPYGAIC 262 (277)
Q Consensus 230 G-G~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC 262 (277)
| |. ...++....+.++|+...+.+.++.||-
T Consensus 163 G~G~--~~~l~~~~~~~~lI~~iN~~~~~vvAVD 194 (259)
T 3d3k_A 163 DCPE--NVFLRDQPWYKAAVAWANQNRAPVLSID 194 (259)
T ss_dssp CCTT--CTTGGGSHHHHHHHHHHHHHCSCEEEES
T ss_pred CCCC--CCccCcchHHHHHHHHHHhCCCCEEEEE
Confidence 3 22 1222222566666766667788888874
No 162
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=46.56 E-value=22 Score=29.72 Aligned_cols=91 Identities=15% Similarity=0.058 Sum_probs=50.0
Q ss_pred CCeEEEEecCCCc--hhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 160 SPQILVPIANGSE--EMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 160 ~~kV~ill~~g~~--~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
++|++|+.-|+-. ...+....+.|+..|+++.+...... .. ...+.... ..+.. ..++|+|++.||.+
T Consensus 5 mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~-~~-~~~~~~~~---~~~~~-~~~~D~vi~~GGDG---- 74 (292)
T 2an1_A 5 FKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAH-EL-QLKNVPTG---TLAEI-GQQADLAVVVGGDG---- 74 (292)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHH-HT-TCSSCCEE---CHHHH-HHHCSEEEECSCHH----
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh-hc-cccccccc---chhhc-ccCCCEEEEEcCcH----
Confidence 4789988766421 12245677888999999876532211 00 00011111 11111 23589999999964
Q ss_pred hhcCHHHHHHHHHHHHcCCcEEEEchhh
Q 023800 238 FAKSKKLVNMLKKQKESNRPYGAICASP 265 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~i~aiC~G~ 265 (277)
-+.+.++.+.+.+.++.+|-.|+
T Consensus 75 -----T~l~a~~~~~~~~~P~lGI~~Gt 97 (292)
T 2an1_A 75 -----NMLGAARTLARYDINVIGINRGN 97 (292)
T ss_dssp -----HHHHHHHHHTTSSCEEEEBCSSS
T ss_pred -----HHHHHHHHhhcCCCCEEEEECCC
Confidence 22345555555678888887776
No 163
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=45.79 E-value=71 Score=24.29 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=53.0
Q ss_pred CeEEEEecCCCchhh--HHHHHHHHHh-CCCeEEEEeeCCCce--EEcccCcEE--EeCcchhhhccCCccEEEEcCCcc
Q 023800 161 PQILVPIANGSEEME--AVIIIDILRR-AKANVVVASVADKLE--ILASCQVKL--VADMLIDEAAKLSYDLIVLPGGLG 233 (277)
Q Consensus 161 ~kV~ill~~g~~~~e--~~~~~~~l~~-a~~~v~~vs~~~~~~--v~~~~g~~i--~~~~~~~~~~~~~~D~livpGG~~ 233 (277)
+||.|+.+....-++ .-.+.+.+.. .|.+++++......+ +.+..+... .+....+++ ..+|.|++..-.
T Consensus 2 mkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~aD~ii~gsP~- 78 (198)
T 3b6i_A 2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQEL--ADYDAIIFGTPT- 78 (198)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCCCSCHHHHHHTTCCCCCSCBCCGGGG--GGCSEEEEEEEE-
T ss_pred CeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEccccCchhhhhhcccccccCchhhHHHH--HHCCEEEEEeCh-
Confidence 588888776433222 3446667777 789999887754200 000111100 011113333 468999885421
Q ss_pred hHHhhhcCHHHHHHHHHHH-------HcCCcEEEEchhhH
Q 023800 234 GAQAFAKSKKLVNMLKKQK-------ESNRPYGAICASPA 266 (277)
Q Consensus 234 ~~~~~~~~~~~~~~l~~~~-------~~~~~i~aiC~G~~ 266 (277)
....-.+.+..||.+.. -++|+++.++++.+
T Consensus 79 --y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~ 116 (198)
T 3b6i_A 79 --RFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGT 116 (198)
T ss_dssp --ETTEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEESS
T ss_pred --hcCCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeCCC
Confidence 11223456666665542 26788887776543
No 164
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=44.07 E-value=37 Score=25.85 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=54.1
Q ss_pred CCeEEEEecCCCch---hhHHHHHHHHHh-CCC---eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC--
Q 023800 160 SPQILVPIANGSEE---MEAVIIIDILRR-AKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG-- 230 (277)
Q Consensus 160 ~~kV~ill~~g~~~---~e~~~~~~~l~~-a~~---~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG-- 230 (277)
..||+|+...=... .=+.+..+.|.+ .|. +++++..-|. .-+++....... ..+||+++.-|
T Consensus 17 ~~riaIV~arfn~~I~~~Ll~ga~~~l~~~~Gv~~~~i~v~~VPGa------fEiP~aa~~la~---~~~yDavIaLG~V 87 (159)
T 1kz1_A 17 ELRILIVHARGNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGS------WELPQGIRASIA---RNTYDAVIGIGVL 87 (159)
T ss_dssp TCCEEEEECCTTHHHHHHHHHHHHHHHHHHHCCCGGGEEEEECSSG------GGHHHHHHHHHH---HSCCSEEEEEEEE
T ss_pred CCEEEEEEeeCcHHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHHHHHh---cCCCCEEEEeccc
Confidence 47899998753222 346788999999 775 5777765543 223333322222 24699998765
Q ss_pred --CcchHHhhhcCHHHHHHHHHHHHcCCcEEE
Q 023800 231 --GLGGAQAFAKSKKLVNMLKKQKESNRPYGA 260 (277)
Q Consensus 231 --G~~~~~~~~~~~~~~~~l~~~~~~~~~i~a 260 (277)
|...-...-.+.-.....+-..+.++||+.
T Consensus 88 IrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~~ 119 (159)
T 1kz1_A 88 IKGSTMHFEYISEAVVHGLMRVGLDSGVPVIL 119 (159)
T ss_dssp ECCSSSHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred ccCCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 322223334444555555667778888653
No 165
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=43.76 E-value=15 Score=33.90 Aligned_cols=26 Identities=12% Similarity=-0.035 Sum_probs=20.7
Q ss_pred HHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 65 SIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 65 ~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
.+.+...+.|+||.+||.|.. +|+.+
T Consensus 73 ~~~~~~~~~~~PvLGIC~G~Q-lla~~ 98 (527)
T 3tqi_A 73 RAPAFIFEIGCPVLGICYGMQ-TMAYQ 98 (527)
T ss_dssp -CCCSTTTSSSCEEEETHHHH-HHHHH
T ss_pred hhHHHHHhcCCCEEEEChHHH-HHHHH
Confidence 334556778999999999999 88875
No 166
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=42.80 E-value=1.4e+02 Score=24.83 Aligned_cols=63 Identities=11% Similarity=-0.062 Sum_probs=38.6
Q ss_pred HHHHHhhcccccccCCCchhhcccCccccccCCCCeEEEEecC---CCchhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 127 KADEVSGARVMRANHGDEFTIAEFNPVQWTFDNSPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 127 ~a~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kV~ill~~---g~~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
...++++.+.|.++...+ .+. -.++.+|++++.+ .|...-+.+..+.+++.||++.+......
T Consensus 44 rV~~~~~~lgY~pn~~a~-------~l~--~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 109 (344)
T 3kjx_A 44 RVLAAAKELGYVPNKIAG-------ALA--SNRVNLVAVIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDYL 109 (344)
T ss_dssp HHHHHHHHHTCCCCCCCS-------CST--TSCCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTTC
T ss_pred HHHHHHHHhCCCCCHHHH-------Hhh--cCCCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 444556677777665432 111 1245689999864 24444456677777888999987765543
No 167
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=42.45 E-value=80 Score=25.65 Aligned_cols=89 Identities=9% Similarity=-0.064 Sum_probs=46.3
Q ss_pred CCCeEEEEecCC---CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchH
Q 023800 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (277)
Q Consensus 159 ~~~kV~ill~~g---~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~ 235 (277)
+.++|++++.+. |...-+.+..+.+++.|+++.++......+ .. -...+..+....+|.||+.+...
T Consensus 3 ~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~-~~-------~~~~i~~l~~~~vdgiIi~~~~~-- 72 (305)
T 3g1w_A 3 LNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQYDI-QE-------QITVLEQAIAKNPAGIAISAIDP-- 72 (305)
T ss_dssp --CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSSCH-HH-------HHHHHHHHHHHCCSEEEECCSST--
T ss_pred CCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcCCH-HH-------HHHHHHHHHHhCCCEEEEcCCCH--
Confidence 457899998753 333334567777788899998854332201 00 00112222224578888765321
Q ss_pred HhhhcCHHHHHHHHHHHHcCCcEEEEch
Q 023800 236 QAFAKSKKLVNMLKKQKESNRPYGAICA 263 (277)
Q Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~i~aiC~ 263 (277)
....+.+++..+.+.++..+..
T Consensus 73 ------~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 73 ------VELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp ------TTTHHHHHHHHHTTCCEEEESS
T ss_pred ------HHHHHHHHHHHHCCCcEEEECC
Confidence 1122345555566777766543
No 168
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=41.73 E-value=31 Score=27.52 Aligned_cols=76 Identities=17% Similarity=0.263 Sum_probs=47.8
Q ss_pred CeEEEEecCC-CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEE--cCCcchHHh
Q 023800 161 PQILVPIANG-SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVL--PGGLGGAQA 237 (277)
Q Consensus 161 ~kV~ill~~g-~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~liv--pGG~~~~~~ 237 (277)
.||.+...+| ..+.........|+..||+|...+.+- .++.-++.+...++|+|.+ .+-. ...
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~v------------p~e~iv~~~~~~~~d~v~l~~S~l~--~~~ 158 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDV------------LNENVVEEAAKHKGEKVLLVGSALM--TTS 158 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSC------------CHHHHHHHHHHTTTSCEEEEEECSS--HHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCC------------CHHHHHHHHHHcCCCEEEEEchhcc--cCc
Confidence 5777776654 567778889999999999998876543 2233334444467899999 5543 222
Q ss_pred hhcCHHHHHHHHH
Q 023800 238 FAKSKKLVNMLKK 250 (277)
Q Consensus 238 ~~~~~~~~~~l~~ 250 (277)
+...+++++.|++
T Consensus 159 ~~~~~~~i~~l~~ 171 (215)
T 3ezx_A 159 MLGQKDLMDRLNE 171 (215)
T ss_dssp HTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333444444444
No 169
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=41.39 E-value=10 Score=30.44 Aligned_cols=22 Identities=14% Similarity=0.155 Sum_probs=18.9
Q ss_pred HHHhCCCEEEEEchhHHHHHHHc
Q 023800 69 KQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 69 ~~~~~g~~i~aiC~g~~~~La~a 91 (277)
...++++++.+||.|.. +|+.+
T Consensus 91 ~~~~~~~PilGIC~G~Q-ll~~~ 112 (218)
T 2vpi_A 91 AIFTIGKPVLGICYGMQ-MMNKV 112 (218)
T ss_dssp GGGTSSCCEEEETHHHH-HHHHH
T ss_pred HHHHcCCCEEEEcHHHH-HHHHH
Confidence 44568999999999999 89885
No 170
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=41.30 E-value=53 Score=27.51 Aligned_cols=38 Identities=11% Similarity=0.112 Sum_probs=25.2
Q ss_pred CCCeEEEEecCC--C-ch-hhHHHHHHHHHhCCCeEEEEeeC
Q 023800 159 NSPQILVPIANG--S-EE-MEAVIIIDILRRAKANVVVASVA 196 (277)
Q Consensus 159 ~~~kV~ill~~g--~-~~-~e~~~~~~~l~~a~~~v~~vs~~ 196 (277)
+++|+.+++-|. - .. .-+......|+.+++++++...+
T Consensus 7 ~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~ 48 (304)
T 3s40_A 7 KFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTK 48 (304)
T ss_dssp SCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred CCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEcc
Confidence 457898888762 2 21 22345677888899988877544
No 171
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=41.22 E-value=1e+02 Score=25.13 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=28.7
Q ss_pred CCeEEEEecC---CCchhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 160 SPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 160 ~~kV~ill~~---g~~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
.++|++++.+ .|...-+.+..+.+++.|+++.+......
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 43 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN 43 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTC
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 3679999864 45555567788888899999988876543
No 172
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=41.17 E-value=25 Score=32.52 Aligned_cols=30 Identities=17% Similarity=-0.001 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 61 EVLESIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
+...++++++.++++|+.+||-|-. +|+.+
T Consensus 371 ~g~i~~ir~a~e~~iPiLGICLGmQ-lL~~a 400 (550)
T 1vco_A 371 EGKVRAAQYARERKIPYLGICLGLQ-IAVIE 400 (550)
T ss_dssp HHHHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred hhhHHHHHHHHHCCCcEEEECcCHH-HHHHH
Confidence 4567889988889999999999999 77765
No 173
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=40.56 E-value=51 Score=26.94 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=45.4
Q ss_pred hHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhh------cC----HHH
Q 023800 175 EAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA------KS----KKL 244 (277)
Q Consensus 175 e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~------~~----~~~ 244 (277)
+.....+.|+.++++++++..... + . . + ..+.++ .++||+||+.+... ..+. .+ +..
T Consensus 41 ~~~~l~~aL~~~~~~v~~~~~~~~-~--~--~--f--p~~~~~--L~~yDvIIl~~~~~--~~l~~~~~~~~~~~~~~~~ 107 (256)
T 2gk3_A 41 GATWLLECLRKGGVDIDYMPAHTV-Q--I--A--F--PESIDE--LNRYDVIVISDIGS--NTFLLQNETFYQLKIKPNA 107 (256)
T ss_dssp SCHHHHHHHHHTTCEEEEECHHHH-H--H--C--C--CCSHHH--HHTCSEEEEESCCH--HHHHSCHHHHTTCCCCCCH
T ss_pred cHHHHHHHHHhcCceEEEEecccc-h--h--h--C--CcChhH--HhcCCEEEEeCCch--hhcccccccccccccChHH
Confidence 345677888888999988854210 0 0 0 0 011233 35799999987421 1121 11 566
Q ss_pred HHHHHHHHHcCCcEEEE
Q 023800 245 VNMLKKQKESNRPYGAI 261 (277)
Q Consensus 245 ~~~l~~~~~~~~~i~ai 261 (277)
.+.|+++.++|.-+..+
T Consensus 108 ~~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 108 LESIKEYVKNGGGLLMI 124 (256)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCEEEEE
Confidence 78899998889888887
No 174
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=40.18 E-value=17 Score=30.88 Aligned_cols=31 Identities=23% Similarity=0.100 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHhCCCEEEEEchhHHHH-HHHcC
Q 023800 61 EVLESIVKKQASDGRLYAAICVFLAVA-LGSWG 92 (277)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~-La~aG 92 (277)
+++.++++...++++++.+||-|.. + +..+|
T Consensus 122 ~el~~li~~~~~~~~~~lgIC~GaQ-~~l~~~~ 153 (301)
T 2vdj_A 122 EELKRIMEYSKTNVTSTLHICWGAQ-AGLYHHY 153 (301)
T ss_dssp HHHHHHHHHHHHHEEEEEEETHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEcHHHH-HHHHHhC
Confidence 6788888888899999999999999 5 45443
No 175
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=39.87 E-value=17 Score=31.02 Aligned_cols=32 Identities=19% Similarity=0.066 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHhCCCEEEEEchhHHHHHHHcC
Q 023800 61 EVLESIVKKQASDGRLYAAICVFLAVALGSWG 92 (277)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG 92 (277)
+++.++++...++++++.+||-|..+++..+|
T Consensus 134 ~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~ 165 (312)
T 2h2w_A 134 EELTEIMEWSRHNVYSTMFICWAAQAGLYYFY 165 (312)
T ss_dssp HHHHHHHHHHHHHEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEECHHHHHHHHHhC
Confidence 67888888888999999999999993255443
No 176
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=39.69 E-value=24 Score=26.88 Aligned_cols=94 Identities=17% Similarity=0.100 Sum_probs=54.4
Q ss_pred CCCeEEEEecCCCch---hhHHHHHHHHHhCCC---eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC--
Q 023800 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG-- 230 (277)
Q Consensus 159 ~~~kV~ill~~g~~~---~e~~~~~~~l~~a~~---~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG-- 230 (277)
...||+|+...=... .=+.+..+.|.+.|. +++++..-|. .-+++........ .+||+++.-|
T Consensus 10 ~~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGa------fEiP~aa~~la~~---~~yDavIaLG~V 80 (157)
T 2obx_A 10 ETVRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGA------YEIPLHARTLAET---GRYGAVLGTAFV 80 (157)
T ss_dssp CCEEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSG------GGHHHHHHHHHHH---TCCSEEEEEEEC
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHHHHHhc---CCCCEEEEeecc
Confidence 346899998653222 336788899998875 4677755443 3333333322222 4699998775
Q ss_pred --CcchHHhhhcCHHHHHHHHHHHHcCCcEEEE
Q 023800 231 --GLGGAQAFAKSKKLVNMLKKQKESNRPYGAI 261 (277)
Q Consensus 231 --G~~~~~~~~~~~~~~~~l~~~~~~~~~i~ai 261 (277)
|...-..+-.+.-.....+-..+.++||+.-
T Consensus 81 IrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~G 113 (157)
T 2obx_A 81 VNGGIYRHEFVASAVIDGMMNVQLSTGVPVLSA 113 (157)
T ss_dssp CCCSSBCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 3221122333444445556667788887653
No 177
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=39.55 E-value=55 Score=26.99 Aligned_cols=35 Identities=14% Similarity=0.320 Sum_probs=20.1
Q ss_pred CccEEEEcCCcchHHhhhcCHHHHHHHHHHHHc--CCcEEEEchhh
Q 023800 222 SYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKES--NRPYGAICASP 265 (277)
Q Consensus 222 ~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~--~~~i~aiC~G~ 265 (277)
++|+|++.||.+ -+....+..... +.++.+|-.|.
T Consensus 35 ~~D~vv~lGGDG---------T~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 35 EPEIVISIGGDG---------TFLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SCSEEEEEESHH---------HHHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCEEEEEcCcH---------HHHHHHHHHhhcCCCCCEEEEeCCC
Confidence 568888888753 122333333333 67777776664
No 178
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=39.52 E-value=29 Score=25.20 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=44.6
Q ss_pred CeEEEEecCCCchhh--HHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCC-ccEEEEcCCcchHHh
Q 023800 161 PQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQA 237 (277)
Q Consensus 161 ~kV~ill~~g~~~~e--~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~-~D~livpGG~~~~~~ 237 (277)
+||.|+.+...--++ .-.+.+.+...|++++++..... ...++ .+ +|.|++.........
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~~d~ii~~~p~y~~g~ 63 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASV---------------EAGGL--FEGFDLVLLGCSTWGDDS 63 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGGGC---------------CSTTT--TTTCSEEEEEECEECSSS
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEehhhC---------------CHHHh--cCcCCEEEEEeCCCCCCC
Confidence 367777654332222 23345566667888887765431 11222 45 888888542210000
Q ss_pred hhcCHHHHHHHHHHH---HcCCcEEEEchh
Q 023800 238 FAKSKKLVNMLKKQK---ESNRPYGAICAS 264 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~---~~~~~i~aiC~G 264 (277)
....+.+.+|+.+.. -.++.++.+|+|
T Consensus 64 ~~~p~~~~~fl~~l~~~~l~~k~~~v~~~g 93 (147)
T 1f4p_A 64 IELQDDFIPLFDSLEETGAQGRKVACFGCG 93 (147)
T ss_dssp CEECTTTHHHHHTGGGSCCTTCEEEEEEEE
T ss_pred cCCChhHHHHHHHHHhcccCCCEEEEEeec
Confidence 001224455555432 247888888875
No 179
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=39.44 E-value=70 Score=27.57 Aligned_cols=92 Identities=11% Similarity=-0.012 Sum_probs=52.8
Q ss_pred CCCeEEEEecCCCchhh--HHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH
Q 023800 159 NSPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e--~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~ 236 (277)
+.+|+.++.+....-++ .-.+.+.+...|.+++++..... . ......++ ..+|.|++..-...
T Consensus 255 ~~~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~~~~~~-~----------~~~~~~~l--~~~d~iiigsP~y~-- 319 (404)
T 2ohh_A 255 VDERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHED-D----------RSEIVKDI--LESGAIALGAPTIY-- 319 (404)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEEETTTS-C----------HHHHHHHH--HTCSEEEEECCEET--
T ss_pred CCCcEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HHCCEEEEECcccc--
Confidence 34678887776443333 23456667777889888876542 1 01112233 46899998753211
Q ss_pred hhhcCHHHHHHHHHHH---H---cCCcEEEEchhhH
Q 023800 237 AFAKSKKLVNMLKKQK---E---SNRPYGAICASPA 266 (277)
Q Consensus 237 ~~~~~~~~~~~l~~~~---~---~~~~i~aiC~G~~ 266 (277)
....+.+.+|+.+.. . ++|+++.+|++..
T Consensus 320 -~~~~~~~k~~ld~l~~~~~~~l~~k~~~~~~~~g~ 354 (404)
T 2ohh_A 320 -DEPYPSVGDLLMYLRGLKFNRTLTRKALVFGSMGG 354 (404)
T ss_dssp -TEECTHHHHHHHHHHHHCGGGTCCEEEEEEEEESS
T ss_pred -ccchHHHHHHHHHhhhccccccCCCEEEEEEecCC
Confidence 122334555555443 3 7889888887654
No 180
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=39.10 E-value=48 Score=28.16 Aligned_cols=87 Identities=17% Similarity=0.211 Sum_probs=47.2
Q ss_pred CCeEEEEecCCCch-hhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 160 SPQILVPIANGSEE-MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 160 ~~kV~ill~~g~~~-~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
++|++|++-|.--. ..+....+.|+.+|+++.+......... . ....+.....+|.|++.||.+.
T Consensus 29 ~~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~~~~~-----~-----~~~~~~~~~~~d~vvv~GGDGT---- 94 (332)
T 2bon_A 29 FPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDA-----A-----RYVEEARKFGVATVIAGGGDGT---- 94 (332)
T ss_dssp -CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHH-----H-----HHHHHHHHHTCSEEEEEESHHH----
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecCcchH-----H-----HHHHHHHhcCCCEEEEEccchH----
Confidence 46888887653211 2344567788889998887754422010 0 0011111235899999998642
Q ss_pred hcCHHHHHHHHHHH----HcCCcEEEEchhh
Q 023800 239 AKSKKLVNMLKKQK----ESNRPYGAICASP 265 (277)
Q Consensus 239 ~~~~~~~~~l~~~~----~~~~~i~aiC~G~ 265 (277)
+.+.++... ..+.+++.|=.|+
T Consensus 95 -----l~~v~~~l~~~~~~~~~plgiiP~Gt 120 (332)
T 2bon_A 95 -----INEVSTALIQCEGDDIPALGILPLGT 120 (332)
T ss_dssp -----HHHHHHHHHHCCSSCCCEEEEEECSS
T ss_pred -----HHHHHHHHhhcccCCCCeEEEecCcC
Confidence 223333333 4556777664554
No 181
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=39.03 E-value=95 Score=24.92 Aligned_cols=88 Identities=17% Similarity=0.067 Sum_probs=50.4
Q ss_pred CCCeEEEEecCC---CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchH
Q 023800 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (277)
Q Consensus 159 ~~~kV~ill~~g---~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~ 235 (277)
++.+|++++.+- |...-+.+..+.+++.|+++.++..... .-.- ...+..+....+|.||+.+..
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~~~~l~~~~vdgiI~~~~~--- 74 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNS-RISE--------REQILEFVHLKVDAIFITTLD--- 74 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSC-HHHH--------HHHHHHHHHTTCSEEEEECSC---
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCC-HHHH--------HHHHHHHHHcCCCEEEEecCC---
Confidence 457899998653 2233346677778888999988866543 1000 011222222468999886532
Q ss_pred HhhhcCHHHHHHHHHHHHcCCcEEEEch
Q 023800 236 QAFAKSKKLVNMLKKQKESNRPYGAICA 263 (277)
Q Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~i~aiC~ 263 (277)
.......+++..+.+.++..+..
T Consensus 75 -----~~~~~~~~~~~~~~~iPvV~~~~ 97 (293)
T 3l6u_A 75 -----DVYIGSAIEEAKKAGIPVFAIDR 97 (293)
T ss_dssp -----TTTTHHHHHHHHHTTCCEEEESS
T ss_pred -----hHHHHHHHHHHHHcCCCEEEecC
Confidence 11222455666677888887754
No 182
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=38.43 E-value=83 Score=24.13 Aligned_cols=86 Identities=22% Similarity=0.171 Sum_probs=48.9
Q ss_pred CCCeEEEEecC-----C-CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCc
Q 023800 159 NSPQILVPIAN-----G-SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL 232 (277)
Q Consensus 159 ~~~kV~ill~~-----g-~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~ 232 (277)
+++|++|+..- | ..+.-.......|+..|+++.....-++.+ -.+. ..+.... ..+|+||..||.
T Consensus 2 ~~~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~------~~I~--~~l~~a~-~~~DlVittGG~ 72 (172)
T 3kbq_A 2 NAKNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDL------DEIG--WAFRVAL-EVSDLVVSSGGL 72 (172)
T ss_dssp --CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCH------HHHH--HHHHHHH-HHCSEEEEESCC
T ss_pred CCCEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCH------HHHH--HHHHHHH-hcCCEEEEcCCC
Confidence 34788888752 2 345555667788999999876554322200 0000 1122221 248999999986
Q ss_pred chHH-h-------------hhcCHHHHHHHHHHHH
Q 023800 233 GGAQ-A-------------FAKSKKLVNMLKKQKE 253 (277)
Q Consensus 233 ~~~~-~-------------~~~~~~~~~~l~~~~~ 253 (277)
+... + +..+++..++|+++++
T Consensus 73 g~~~~D~T~ea~a~~~~~~l~~~~e~~~~i~~~~~ 107 (172)
T 3kbq_A 73 GPTFDDMTVEGFAKCIGQDLRIDEDALAMIKKKYG 107 (172)
T ss_dssp SSSTTCCHHHHHHHHHTCCCEECHHHHHHHHHHHC
T ss_pred cCCcccchHHHHHHHcCCCeeeCHHHHHHHHHHHc
Confidence 4211 1 2336788889988875
No 183
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=38.13 E-value=1.8e+02 Score=24.40 Aligned_cols=71 Identities=8% Similarity=-0.051 Sum_probs=42.2
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEE---cccCcEEEeCcchhhhccCCccEEEEcCCc
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEIL---ASCQVKLVADMLIDEAAKLSYDLIVLPGGL 232 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~---~~~g~~i~~~~~~~~~~~~~~D~livpGG~ 232 (277)
.++||.|+=. -...++.....|.+.|++|...-.+..++.. ...|+.+......+++...++|.|++.-|.
T Consensus 3 ~~~~i~~iGi---Gg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi 76 (326)
T 3eag_A 3 AMKHIHIIGI---GGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVA 76 (326)
T ss_dssp CCCEEEEESC---CSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTC
T ss_pred CCcEEEEEEE---CHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCc
Confidence 4578877643 3344556678899999999876544321211 234777765444333320258999986664
No 184
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=38.10 E-value=23 Score=32.61 Aligned_cols=31 Identities=13% Similarity=-0.007 Sum_probs=26.6
Q ss_pred ChHHHHHHHHHHhCCCEEEEEchhHHHHHHHc
Q 023800 60 SEVLESIVKKQASDGRLYAAICVFLAVALGSW 91 (277)
Q Consensus 60 ~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (277)
.+...++++.+.++++++.+||-|.. +|+.+
T Consensus 365 ~~g~i~~ir~a~~~~~PiLGIClG~Q-ll~va 395 (535)
T 3nva_A 365 AEGKIKAIKYAREHNIPFLGICFGFQ-LSIVE 395 (535)
T ss_dssp HHHHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEECcchh-HHHHH
Confidence 35678899999999999999999999 67654
No 185
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=38.06 E-value=56 Score=26.37 Aligned_cols=87 Identities=11% Similarity=0.045 Sum_probs=47.5
Q ss_pred CCeEEEEecCC---CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH
Q 023800 160 SPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (277)
Q Consensus 160 ~~kV~ill~~g---~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~ 236 (277)
+.+|++++.+- |...-+.+..+.+++.|+++.+...... +-. + ...+..+....+|.||+.+... .
T Consensus 2 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~-~~~-------~-~~~~~~l~~~~vdgiI~~~~~~--~ 70 (290)
T 2fn9_A 2 KGKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQND-TAK-------E-SAHFDAIIAAGYDAIIFNPTDA--D 70 (290)
T ss_dssp -CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHH-------H-HHHHHHHHHTTCSEEEECCSCT--T
T ss_pred ceEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCCCCC-HHH-------H-HHHHHHHHHcCCCEEEEecCCh--H
Confidence 46899988642 2233345667777888999887765433 100 0 0112222224689999875421 1
Q ss_pred hhhcCHHHHHHHHHHHHcCCcEEEEch
Q 023800 237 AFAKSKKLVNMLKKQKESNRPYGAICA 263 (277)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~i~aiC~ 263 (277)
...+.++...+.+.++..+..
T Consensus 71 ------~~~~~~~~~~~~~iPvV~~~~ 91 (290)
T 2fn9_A 71 ------GSIANVKRAKEAGIPVFCVDR 91 (290)
T ss_dssp ------TTHHHHHHHHHTTCCEEEESS
T ss_pred ------HHHHHHHHHHHCCCeEEEEec
Confidence 112234445567788877654
No 186
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=37.56 E-value=26 Score=26.68 Aligned_cols=93 Identities=19% Similarity=0.146 Sum_probs=53.7
Q ss_pred CCeEEEEecCCCch---hhHHHHHHHHHhCCC---eEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC---
Q 023800 160 SPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG--- 230 (277)
Q Consensus 160 ~~kV~ill~~g~~~---~e~~~~~~~l~~a~~---~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG--- 230 (277)
..||+|+...=... .=+.+..+.|.+.|. +++++..-|. .-+++....... ..+||+++.-|
T Consensus 10 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGa------fEiP~aa~~la~---~~~yDavIaLG~VI 80 (158)
T 1di0_A 10 SFKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGA------YEIPLHAKTLAR---TGRYAAIVGAAFVI 80 (158)
T ss_dssp CEEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSG------GGHHHHHHHHHH---TSCCSEEEEEEECC
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHHHHHh---cCCCCEEEEeeccc
Confidence 36899998653222 336788899998875 4677755443 333333332222 24799998775
Q ss_pred -CcchHHhhhcCHHHHHHHHHHHHcCCcEEEE
Q 023800 231 -GLGGAQAFAKSKKLVNMLKKQKESNRPYGAI 261 (277)
Q Consensus 231 -G~~~~~~~~~~~~~~~~l~~~~~~~~~i~ai 261 (277)
|...-..+-.+.-.....+-..+.++||+.-
T Consensus 81 rG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~G 112 (158)
T 1di0_A 81 DGGIYDHDFVATAVINGMMQVQLETEVPVLSV 112 (158)
T ss_dssp CCSSBCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred cCCCcHHHHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 3221122333444445555567788887653
No 187
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=37.24 E-value=1.2e+02 Score=24.25 Aligned_cols=40 Identities=8% Similarity=0.026 Sum_probs=27.9
Q ss_pred CCCeEEEEecCCCc---hhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 159 NSPQILVPIANGSE---EMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 159 ~~~kV~ill~~g~~---~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
++++|++++.+-.+ ..-+.+..+.+++.|+++.+......
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 46 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRN 46 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence 45789999875322 22356677788888999988866543
No 188
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=36.53 E-value=63 Score=27.00 Aligned_cols=93 Identities=15% Similarity=0.106 Sum_probs=50.2
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEe------------CcchhhhccCCccEEE
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVA------------DMLIDEAAKLSYDLIV 227 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~------------~~~~~~~~~~~~D~li 227 (277)
++||+|+ --|..-.-+ ...|.++|++|.++..+....+ ...|+.+.. ....+.+ ..+|+|+
T Consensus 2 ~mkI~Ii-GaGaiG~~~---a~~L~~~g~~V~~~~r~~~~~i-~~~g~~~~~~~g~~~~~~~~~~~~~~~~--~~~D~vi 74 (312)
T 3hn2_A 2 SLRIAIV-GAGALGLYY---GALLQRSGEDVHFLLRRDYEAI-AGNGLKVFSINGDFTLPHVKGYRAPEEI--GPMDLVL 74 (312)
T ss_dssp --CEEEE-CCSTTHHHH---HHHHHHTSCCEEEECSTTHHHH-HHTCEEEEETTCCEEESCCCEESCHHHH--CCCSEEE
T ss_pred CCEEEEE-CcCHHHHHH---HHHHHHCCCeEEEEEcCcHHHH-HhCCCEEEcCCCeEEEeeceeecCHHHc--CCCCEEE
Confidence 3678877 455555443 3455678899988876431011 112332221 1122222 4689999
Q ss_pred EcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhh
Q 023800 228 LPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASP 265 (277)
Q Consensus 228 vpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~ 265 (277)
+.-= .. ..+++.+.|+.....+..|.+++.|.
T Consensus 75 lavk---~~---~~~~~l~~l~~~l~~~~~iv~l~nGi 106 (312)
T 3hn2_A 75 VGLK---TF---ANSRYEELIRPLVEEGTQILTLQNGL 106 (312)
T ss_dssp ECCC---GG---GGGGHHHHHGGGCCTTCEEEECCSSS
T ss_pred EecC---CC---CcHHHHHHHHhhcCCCCEEEEecCCC
Confidence 8742 11 23355666666666677888888875
No 189
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=36.48 E-value=1.1e+02 Score=25.49 Aligned_cols=40 Identities=5% Similarity=-0.045 Sum_probs=27.8
Q ss_pred CCCeEEEEecC--C---CchhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 159 NSPQILVPIAN--G---SEEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 159 ~~~kV~ill~~--g---~~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
++.+|++++.+ - |...-+.+..+.+++.||++.++.....
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 104 (338)
T 3dbi_A 60 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS 104 (338)
T ss_dssp CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 45789999876 2 2233356677778889999988875543
No 190
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=36.45 E-value=77 Score=26.12 Aligned_cols=87 Identities=14% Similarity=0.045 Sum_probs=52.4
Q ss_pred CCeEEEEecCC---CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHH
Q 023800 160 SPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (277)
Q Consensus 160 ~~kV~ill~~g---~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~ 236 (277)
+++|++++.+- |...-+.+..+.++..|+++.++..... +-.- ...+..+-...+|+||+.+...
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~--------~~~i~~~~~~~vdgiIi~~~~~--- 70 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDD-IPNQ--------LSQIENMVTKGVKVLVIASIDG--- 70 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHHH--------HHHHHHHHHHTCSEEEECCSSG---
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCC-HHHH--------HHHHHHHHHcCCCEEEEEcCCc---
Confidence 47899998752 3444456677888889999988875443 1000 0112222224689999876421
Q ss_pred hhhcCHHHHHHHHHHHHcCCcEEEEch
Q 023800 237 AFAKSKKLVNMLKKQKESNRPYGAICA 263 (277)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~i~aiC~ 263 (277)
......+++..+.+.++..+..
T Consensus 71 -----~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 71 -----TTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp -----GGGHHHHHHHHHTTCEEEEESS
T ss_pred -----hhHHHHHHHHHHCCCCEEEECC
Confidence 1223456666777888887754
No 191
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=35.65 E-value=55 Score=27.48 Aligned_cols=94 Identities=17% Similarity=0.088 Sum_probs=47.6
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEe-------------CcchhhhccCCccEE
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVA-------------DMLIDEAAKLSYDLI 226 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~-------------~~~~~~~~~~~~D~l 226 (277)
++||+|+ --|..-.- ....|.++|++|.++..+....+ ...|+.+.. ....+++ ...+|+|
T Consensus 2 ~mkI~Ii-GaGaiG~~---~a~~L~~~g~~V~~~~r~~~~~i-~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~-~~~~DlV 75 (320)
T 3i83_A 2 SLNILVI-GTGAIGSF---YGALLAKTGHCVSVVSRSDYETV-KAKGIRIRSATLGDYTFRPAAVVRSAAEL-ETKPDCT 75 (320)
T ss_dssp -CEEEEE-SCCHHHHH---HHHHHHHTTCEEEEECSTTHHHH-HHHCEEEEETTTCCEEECCSCEESCGGGC-SSCCSEE
T ss_pred CCEEEEE-CcCHHHHH---HHHHHHhCCCeEEEEeCChHHHH-HhCCcEEeecCCCcEEEeeeeeECCHHHc-CCCCCEE
Confidence 4688887 44444333 33456778999998876531000 012222221 1122222 1368999
Q ss_pred EEcCCcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhh
Q 023800 227 VLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASP 265 (277)
Q Consensus 227 ivpGG~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~ 265 (277)
|++-=. . ..+++.+.|+.....+..|.+++.|.
T Consensus 76 ilavK~---~---~~~~~l~~l~~~l~~~t~Iv~~~nGi 108 (320)
T 3i83_A 76 LLCIKV---V---EGADRVGLLRDAVAPDTGIVLISNGI 108 (320)
T ss_dssp EECCCC---C---TTCCHHHHHTTSCCTTCEEEEECSSS
T ss_pred EEecCC---C---ChHHHHHHHHhhcCCCCEEEEeCCCC
Confidence 986411 1 12234455555455566777777764
No 192
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=35.48 E-value=1.2e+02 Score=21.77 Aligned_cols=86 Identities=17% Similarity=0.185 Sum_probs=44.7
Q ss_pred CeEEEEecC--CCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 161 PQILVPIAN--GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 161 ~kV~ill~~--g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
+|+.|+-+. |....=.-.+.+.+...+.+++++... ...+ ..++|.|++.....+....
T Consensus 2 ~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~-----------------~~~~--l~~~d~vi~g~pt~g~g~~ 62 (147)
T 2hna_A 2 ADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGP-----------------LLED--LPASGIWLVISSTHGAGDI 62 (147)
T ss_dssp CSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEECCT-----------------TSCS--SCSEEEEEEECCTTTTCCT
T ss_pred CeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEecCC-----------------CHHH--cccCCeEEEEECccCCCCC
Confidence 467777654 333333344566677778887765210 1222 2468888876432111111
Q ss_pred -hcCHHHHHHHHHH--HHcCCcEEEEchhh
Q 023800 239 -AKSKKLVNMLKKQ--KESNRPYGAICASP 265 (277)
Q Consensus 239 -~~~~~~~~~l~~~--~~~~~~i~aiC~G~ 265 (277)
..-..+.++++.. .-+++.++.++.|.
T Consensus 63 p~~~~~f~~~l~~~~~~l~~~~~avfg~G~ 92 (147)
T 2hna_A 63 PDNLSPFYEALQEQKPDLSAVRFGAIGIGS 92 (147)
T ss_dssp TSSCHHHHHHHHHHCCCTTEEEEEEESCCH
T ss_pred ChhHHHHHHHHHhhccccCCCEEEEEeccc
Confidence 1234566666543 22467777777654
No 193
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=34.75 E-value=40 Score=25.97 Aligned_cols=94 Identities=11% Similarity=0.121 Sum_probs=53.5
Q ss_pred CCeEEEEecCCCch---hhHHHHHHHHHhCCC---eEEEEeeCCCceEEcccCcEEEeCcchhhh--ccCCccEEEEcC-
Q 023800 160 SPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEA--AKLSYDLIVLPG- 230 (277)
Q Consensus 160 ~~kV~ill~~g~~~---~e~~~~~~~l~~a~~---~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~--~~~~~D~livpG- 230 (277)
..||+|+...=... .=+.+..+.|.+.|. ++.++..-|. .-+++........- ....||+++.-|
T Consensus 16 ~~ri~IV~arfn~~I~~~Ll~gA~~~L~~~Gv~~~~i~v~~VPGa------fEiP~aak~la~~~~~~~~~yDavIaLG~ 89 (168)
T 1ejb_A 16 KIRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGS------YELPWGTKRFVDRQAKLGKPLDVVIPIGV 89 (168)
T ss_dssp TCCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECSSG------GGHHHHHHHHHHHHHHTTCCCSEEEEEEE
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHHHHHhhccccCCCcCEEEEecc
Confidence 47899998753222 346788999999985 5777765543 33333333222210 024699998765
Q ss_pred ---CcchHHhhhcCHHHHHHHHHHHHcCCcEE
Q 023800 231 ---GLGGAQAFAKSKKLVNMLKKQKESNRPYG 259 (277)
Q Consensus 231 ---G~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 259 (277)
|...-..+-.+.-.....+-..+.++||+
T Consensus 90 VIrG~T~Hfd~Va~~vs~Gl~~vsL~~~vPV~ 121 (168)
T 1ejb_A 90 LIKGSTMHFEYISDSTTHALMNLQEKVDMPVI 121 (168)
T ss_dssp EECCSSSHHHHHHHHHHHHHHHHHHHHTSCBC
T ss_pred cccCCchHHHHHHHHHHHHHHHHHhhcCCCEE
Confidence 32222333344444555555667777754
No 194
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=34.08 E-value=3.9 Score=32.15 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=50.1
Q ss_pred CCeEEEEecC----CCchhhHHHHHHH-HHhCCCeEEEEeeCCCceEEcccCcEEEeC---cchhhhccCCccEEEEcCC
Q 023800 160 SPQILVPIAN----GSEEMEAVIIIDI-LRRAKANVVVASVADKLEILASCQVKLVAD---MLIDEAAKLSYDLIVLPGG 231 (277)
Q Consensus 160 ~~kV~ill~~----g~~~~e~~~~~~~-l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~---~~~~~~~~~~~D~livpGG 231 (277)
|+||.++... |....=.-...+. +...|.+++++....- ++..-.+-...++ ...+++ ..+|.|++..-
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~~~-~~~~~~~~~~~~~~~~~~~~~i--~~aD~ii~~sP 78 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHVIDL-DPKALLRGDLSNAKLKEAVDAT--CNADGLIVATP 78 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEGGGS-CHHHHHHTCTTSHHHHHHHHHH--HHCSEEEEEEE
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEcccc-CchhhcccccCcHHHHHHHHHH--HHCCEEEEEeC
Confidence 4678877765 3232223345566 7777889988876532 2210000000001 001122 35788888532
Q ss_pred cchHHhhhcCHHHHHHHHHHH---HcCCcEEEEchhhH
Q 023800 232 LGGAQAFAKSKKLVNMLKKQK---ESNRPYGAICASPA 266 (277)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~---~~~~~i~aiC~G~~ 266 (277)
. ....-.+.+..||.+.. -++|+++.+++|..
T Consensus 79 ~---y~~~~p~~lK~~ld~l~~~~~~gK~~~~~~tgg~ 113 (197)
T 2vzf_A 79 I---YKASYTGLLKAFLDILPQFALAGKAALPLATGGS 113 (197)
T ss_dssp C---BTTBCCHHHHHHHTTSCTTTTTTCEEEEEEEESS
T ss_pred c---cCCCCCHHHHHHHHhccccccCCCEEEEEEECCC
Confidence 1 11223445555555432 24788888877543
No 195
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=33.97 E-value=51 Score=24.05 Aligned_cols=77 Identities=19% Similarity=0.199 Sum_probs=44.9
Q ss_pred CeEEEEecCC-CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhh
Q 023800 161 PQILVPIANG-SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (277)
Q Consensus 161 ~kV~ill~~g-~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~ 239 (277)
+||.+...++ ..+.........|+.+||++...+.. +.++...+.+...+.|+|.+..-.. ....
T Consensus 4 ~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~------------~p~e~~v~~a~~~~~d~v~lS~~~~--~~~~ 69 (137)
T 1ccw_A 4 KTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL------------SPQELFIKAAIETKADAILVSSLYG--QGEI 69 (137)
T ss_dssp CEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE------------ECHHHHHHHHHHHTCSEEEEEECSS--THHH
T ss_pred CEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC------------CCHHHHHHHHHhcCCCEEEEEecCc--CcHH
Confidence 4566655443 45566677889999999999888653 2233333333335678888876432 1122
Q ss_pred cCHHHHHHHHHH
Q 023800 240 KSKKLVNMLKKQ 251 (277)
Q Consensus 240 ~~~~~~~~l~~~ 251 (277)
.-+++.+.|++.
T Consensus 70 ~~~~~i~~l~~~ 81 (137)
T 1ccw_A 70 DCKGLRQKCDEA 81 (137)
T ss_dssp HHTTHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 234455555543
No 196
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=31.91 E-value=91 Score=23.74 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=51.6
Q ss_pred CCeEEEEecCCCchhh--HHHHHHHHHhCCCeEEEEeeCCC-ceEE-cccCcEEE---eCcchhhhccCCccEEEEcCCc
Q 023800 160 SPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADK-LEIL-ASCQVKLV---ADMLIDEAAKLSYDLIVLPGGL 232 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e--~~~~~~~l~~a~~~v~~vs~~~~-~~v~-~~~g~~i~---~~~~~~~~~~~~~D~livpGG~ 232 (277)
++||.|+.+. ..-++ .-.+.+.+...|.+++++..... ++.. +..+-... +....+++ ..+|.|++..-.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~l--~~aD~ii~gsP~ 80 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFDKVKDIPEVTLDDM--RWADGFAIGSPT 80 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCCCSCGGGGTTCCGGGSTTSCBCCHHHH--HHCSEEEEEEEC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhHhCChhhhhccCCCcccccccccHHHH--HhCCEEEEECCc
Confidence 4689888877 33333 23355566667899988876532 0100 11110000 00013333 368999885321
Q ss_pred chHHhhhcCHHHHHHHHHHH-------HcCCcEEEEchhh
Q 023800 233 GGAQAFAKSKKLVNMLKKQK-------ESNRPYGAICASP 265 (277)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~~~-------~~~~~i~aiC~G~ 265 (277)
....-.+.+..||.+.. -++|+++.++++.
T Consensus 81 ---y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g 117 (199)
T 2zki_A 81 ---RYGNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEAS 117 (199)
T ss_dssp ---BTTBCCHHHHHHHHTTHHHHHTTSSTTCEEEEEEEBS
T ss_pred ---cccCccHHHHHHHHHhhhcccccccCCCEEEEEEeCC
Confidence 11233456667776642 2578888777643
No 197
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=31.65 E-value=42 Score=25.32 Aligned_cols=77 Identities=19% Similarity=0.194 Sum_probs=44.9
Q ss_pred CCeEEEEecCC-CchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhh
Q 023800 160 SPQILVPIANG-SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (277)
Q Consensus 160 ~~kV~ill~~g-~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~ 238 (277)
.+||.+...+| ..+.........|+.+||+|...+.+- .++...+.+...++|+|.+..-.. ...
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~------------p~e~lv~aa~~~~~diV~lS~~~~--~~~ 83 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQ------------TPEQVAMAAVQEDVDVIGVSILNG--AHL 83 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBC------------CHHHHHHHHHHTTCSEEEEEESSS--CHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC------------CHHHHHHHHHhcCCCEEEEEeech--hhH
Confidence 35676665554 445666788889999999998775432 223333333335678888875321 112
Q ss_pred hcCHHHHHHHHH
Q 023800 239 AKSKKLVNMLKK 250 (277)
Q Consensus 239 ~~~~~~~~~l~~ 250 (277)
..-+++++.|++
T Consensus 84 ~~~~~~i~~L~~ 95 (161)
T 2yxb_A 84 HLMKRLMAKLRE 95 (161)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 233455555554
No 198
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=30.44 E-value=32 Score=27.63 Aligned_cols=101 Identities=8% Similarity=0.023 Sum_probs=50.9
Q ss_pred CeEEEEecC----CCchhhHHHHHHHHHhC-CCeEEEEeeCCCceEE---cc------cCcEEEeC-cchhhh--ccCCc
Q 023800 161 PQILVPIAN----GSEEMEAVIIIDILRRA-KANVVVASVADKLEIL---AS------CQVKLVAD-MLIDEA--AKLSY 223 (277)
Q Consensus 161 ~kV~ill~~----g~~~~e~~~~~~~l~~a-~~~v~~vs~~~~~~v~---~~------~g~~i~~~-~~~~~~--~~~~~ 223 (277)
+||.++... |....=.-.+.+.++.+ |.+++++..... .+. +. .|...... ..+.++ ....+
T Consensus 2 mkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~~~-~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~A 80 (242)
T 1sqs_A 2 NKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNS-ELEISNSDSEELFKKGIDRQSNADDGGVIKKELLES 80 (242)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECTTTC-CCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHHC
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEcccC-CCCCCCchHHhhccCCCCccchHHHHHHHHHHHHHC
Confidence 578777764 22222234456667776 899999876543 221 11 01100010 111111 12468
Q ss_pred cEEEEcCCcchHHhhhcCHHHHHHHHHHH-------HcCCcEEEEchhh
Q 023800 224 DLIVLPGGLGGAQAFAKSKKLVNMLKKQK-------ESNRPYGAICASP 265 (277)
Q Consensus 224 D~livpGG~~~~~~~~~~~~~~~~l~~~~-------~~~~~i~aiC~G~ 265 (277)
|+||+..- .....-.+.+..||-+.. -.||+++.++++.
T Consensus 81 D~iI~~sP---~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g 126 (242)
T 1sqs_A 81 DIIIISSP---VYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAE 126 (242)
T ss_dssp SEEEEEEE---ECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEES
T ss_pred CEEEEEcc---ccccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCC
Confidence 99988642 112233456666666542 2578877776653
No 199
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=30.23 E-value=1.4e+02 Score=27.24 Aligned_cols=97 Identities=15% Similarity=0.180 Sum_probs=61.1
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEE----------cccCcEEEeCcchhhhccCCccEEEEc-
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEIL----------ASCQVKLVADMLIDEAAKLSYDLIVLP- 229 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~----------~~~g~~i~~~~~~~~~~~~~~D~livp- 229 (277)
++|.|++-+|.+--|-......|...|++|+++-.... .. ...|..+..+ .+.. ....+|+||=.
T Consensus 53 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~--~~~~~~~~~~~~~~~g~~~~~~-~~~~-~~~~~dliVDal 128 (502)
T 3rss_A 53 YRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKK--KTPDCEYNYGLYKKFGGKVVEQ-FEPS-ILNEFDVVVDAI 128 (502)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSS--CCHHHHHHHHHHHHTTCCEESC-CCGG-GGGGCSEEEEES
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCC--CCHHHHHHHHHHHhCCCceecc-cccc-cCCCCCEEEEeC
Confidence 68999999999999988888999999999998876532 11 1124444421 1111 12346644321
Q ss_pred -C-CcchHHhhhcCHHHHHHHHHHHHcCCcEEEEchhh
Q 023800 230 -G-GLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASP 265 (277)
Q Consensus 230 -G-G~~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~ 265 (277)
| |.. -.-.+++.++|+...+.++++.||-.=+
T Consensus 129 fG~Gl~----~~l~~~~~~~i~~iN~~~~~vvAvDiPS 162 (502)
T 3rss_A 129 FGTGLR----GEITGEYAEIINLVNKSGKVVVSVDVPS 162 (502)
T ss_dssp CSTTCC----SCCCHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred ccCCCC----CCCcHHHHHHHHHHHcCCCCEEEecCCC
Confidence 2 221 1224566677777777888999987433
No 200
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=29.99 E-value=1.3e+02 Score=25.78 Aligned_cols=144 Identities=10% Similarity=0.067 Sum_probs=71.7
Q ss_pred hHHHHHhhcccccccC--CCchhhcccC-ccccccCCCCeEEEEecCC----CchhhHHHHHHHHHhCCC-eEEEEeeCC
Q 023800 126 GKADEVSGARVMRANH--GDEFTIAEFN-PVQWTFDNSPQILVPIANG----SEEMEAVIIIDILRRAKA-NVVVASVAD 197 (277)
Q Consensus 126 ~~a~~v~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~kV~ill~~g----~~~~e~~~~~~~l~~a~~-~v~~vs~~~ 197 (277)
+.|+++++.+..+-.+ ..+|+..|.. +...++ +.+.|.|+-.-. -..+|+....+++++++. ++..|-|=-
T Consensus 14 ~La~~ia~~lg~~l~~~~~~~F~dGE~~v~i~esv-rg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA~rIt~ViPY~ 92 (326)
T 3s5j_B 14 DLSQKIADRLGLELGKVVTKKFSNQETCVEIGESV-RGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIPCF 92 (326)
T ss_dssp HHHHHHHHHTTCCCCCEEEEECTTSCEEEEECSCC-TTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEESSC
T ss_pred HHHHHHHHHhCCceeeeEEeECCCCCEEEEECCCc-CCCcEEEEecCCCCccHHHHHHHHHHHHHHhcCCcEEEEeccCc
Confidence 4566666666555332 3334444443 222223 346777775421 246899999999999875 666665521
Q ss_pred C---ceEEcccCcEEEeCcchhhhccCCccEEEEcCCcc---------hHHhhhcCHHHHHHHHHHHH--cCCcEEEEch
Q 023800 198 K---LEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLG---------GAQAFAKSKKLVNMLKKQKE--SNRPYGAICA 263 (277)
Q Consensus 198 ~---~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~---------~~~~~~~~~~~~~~l~~~~~--~~~~i~aiC~ 263 (277)
+ +--+...|-.+.+...-+-+....+|-|+.---+. +.+++...+.+.+|+++.+. +...|.+.-.
T Consensus 93 ~YaRQDr~~~~repisak~vA~lL~~~G~drvit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~~~~~~~~vVVspd~ 172 (326)
T 3s5j_B 93 PYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDA 172 (326)
T ss_dssp TTTTCCSCTTSSCCCHHHHHHHHHHHHTCSEEEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHHHCTTGGGCEEEESSG
T ss_pred cccccCCcCCCCCCEeHHHHHHHHHHcCCCEEEEEeCCChHHHhhcCCceeceEcHHHHHHHHHHhcCcCCCcEEEEECC
Confidence 1 00011112111111000000001233333321110 11234445678889987653 4568999999
Q ss_pred hhHHhhhh
Q 023800 264 SPALVLEP 271 (277)
Q Consensus 264 G~~~lLa~ 271 (277)
|.+ .+|.
T Consensus 173 Ggv-~~A~ 179 (326)
T 3s5j_B 173 GGA-KRVT 179 (326)
T ss_dssp GGH-HHHH
T ss_pred Cch-HHHH
Confidence 988 6764
No 201
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=29.60 E-value=1.6e+02 Score=23.70 Aligned_cols=38 Identities=8% Similarity=-0.077 Sum_probs=26.3
Q ss_pred CCCeEEEEec----C---CCchhhHHHHHHHHHhCCCeEEEEeeC
Q 023800 159 NSPQILVPIA----N---GSEEMEAVIIIDILRRAKANVVVASVA 196 (277)
Q Consensus 159 ~~~kV~ill~----~---g~~~~e~~~~~~~l~~a~~~v~~vs~~ 196 (277)
++.+|++++. + .|...-+.+..+.+++.||++.++..+
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 49 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDE 49 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999986 2 123333566777788889999888765
No 202
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=29.58 E-value=1.6e+02 Score=21.29 Aligned_cols=66 Identities=20% Similarity=0.090 Sum_probs=38.2
Q ss_pred cCCCCeEEEEecCCCc-hhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcC
Q 023800 157 FDNSPQILVPIANGSE-EMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG 230 (277)
Q Consensus 157 ~~~~~kV~ill~~g~~-~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpG 230 (277)
+.++++|+|+=...-. -+. ...+..|...||++.-+.++.. .+ .|.++. .+++++. ...|++++.-
T Consensus 11 l~~p~~IavIGaS~~~g~~G-~~~~~~L~~~G~~V~~vnp~~~-~i---~G~~~~--~s~~el~-~~vDlvii~v 77 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYG-NIILKDLLSKGFEVLPVNPNYD-EI---EGLKCY--RSVRELP-KDVDVIVFVV 77 (138)
T ss_dssp ---CCEEEEETCCSCTTSHH-HHHHHHHHHTTCEEEEECTTCS-EE---TTEECB--SSGGGSC-TTCCEEEECS
T ss_pred ccCCCeEEEEeecCCCCCHH-HHHHHHHHHCCCEEEEeCCCCC-eE---CCeeec--CCHHHhC-CCCCEEEEEe
Confidence 3467899998653211 122 2344557788999777777764 44 455544 3455553 3578887753
No 203
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=29.49 E-value=1.4e+02 Score=20.75 Aligned_cols=67 Identities=18% Similarity=0.181 Sum_probs=40.1
Q ss_pred HHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCHH--HHHHHHHHHH--
Q 023800 178 IIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKK--LVNMLKKQKE-- 253 (277)
Q Consensus 178 ~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~--~~~~l~~~~~-- 253 (277)
...+.+...|.+++++..... ...++ .++|.|++...... ....+. +..|+.+...
T Consensus 19 ~i~~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~d~vi~g~p~y~---~~~~~~~~~~~fl~~l~~~l 78 (137)
T 2fz5_A 19 EIEAAVKAAGADVESVRFEDT---------------NVDDV--ASKDVILLGCPAMG---SEELEDSVVEPFFTDLAPKL 78 (137)
T ss_dssp HHHHHHHHTTCCEEEEETTSC---------------CHHHH--HTCSEEEEECCCBT---TTBCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHhCCCeEEEEEcccC---------------CHHHH--hcCCEEEEEccccC---CCCCCHHHHHHHHHHhhhhc
Confidence 455667777888888865432 12333 46899988653211 122344 7777776543
Q ss_pred cCCcEEEEchh
Q 023800 254 SNRPYGAICAS 264 (277)
Q Consensus 254 ~~~~i~aiC~G 264 (277)
++|+++.+++.
T Consensus 79 ~~k~~~~~~t~ 89 (137)
T 2fz5_A 79 KGKKVGLFGSY 89 (137)
T ss_dssp SSCEEEEEEEE
T ss_pred CCCEEEEEEec
Confidence 67888877654
No 204
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=29.35 E-value=1.6e+02 Score=23.57 Aligned_cols=38 Identities=13% Similarity=-0.085 Sum_probs=27.5
Q ss_pred CeEEEEecCC---CchhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 161 PQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 161 ~kV~ill~~g---~~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
++|++++.+- |...-+.+..+.+++.|+++.++.....
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 56 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNN 56 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6899988652 3444456777888889999988876543
No 205
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=29.07 E-value=83 Score=25.40 Aligned_cols=91 Identities=9% Similarity=-0.072 Sum_probs=48.1
Q ss_pred CCCeEEEEecCC----CchhhHHHHHHHHHhC-CCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcc
Q 023800 159 NSPQILVPIANG----SEEMEAVIIIDILRRA-KANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLG 233 (277)
Q Consensus 159 ~~~kV~ill~~g----~~~~e~~~~~~~l~~a-~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~ 233 (277)
++.+|++++.+- |...-+.+..+.+++. ||.+.+...... . .... .-...+..+....+|.||+.+...
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~-~----~~~~-~~~~~i~~l~~~~vdgiii~~~~~ 80 (304)
T 3gbv_A 7 KKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYD-P----YDYN-SFVATSQAVIEEQPDGVMFAPTVP 80 (304)
T ss_dssp CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEEC-S----SCHH-HHHHHHHHHHTTCCSEEEECCSSG
T ss_pred CcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCC-C----CCHH-HHHHHHHHHHhcCCCEEEECCCCh
Confidence 456899988653 3333356677777888 888877653211 0 0000 000112223235688888876421
Q ss_pred hHHhhhcCHHHHHHHHHHHHcCCcEEEEch
Q 023800 234 GAQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (277)
Q Consensus 234 ~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~ 263 (277)
. ...+.++...+.+.++..+..
T Consensus 81 --~------~~~~~~~~~~~~~iPvV~~~~ 102 (304)
T 3gbv_A 81 --Q------YTKGFTDALNELGIPYIYIDS 102 (304)
T ss_dssp --G------GTHHHHHHHHHHTCCEEEESS
T ss_pred --H------HHHHHHHHHHHCCCeEEEEeC
Confidence 1 122345555566777776654
No 206
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=28.76 E-value=9.3 Score=29.39 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=47.9
Q ss_pred ChHHHHHHHHHHhCCCEEEEEchhHHHHHHHcCCCCCCC-----------CCCeEcCCCCCCHHHHHHHHHHHhc
Q 023800 60 SEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------DGKVVTTRGPGTPMEFVVALVEQLY 123 (277)
Q Consensus 60 ~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------dg~~iT~~g~~~~~~~a~~li~~l~ 123 (277)
+..+....+.|.+.+..-++.|+-.+ +++...||+... +||+--+.|...-.+......+.+.
T Consensus 83 ~~~l~pvq~a~~~~~~~QCG~CtpG~-imsa~all~~~~~pt~~ei~~~l~gnlCRCtgY~~I~~Av~~~a~~~~ 156 (163)
T 1ffv_A 83 KGVLHAVQEGFYKEHGLQCGFCTPGM-LMRAYRFLQENPNPTEAEIRMGMTGNLCRCTGYQNIVKAVQYAARKLQ 156 (163)
T ss_dssp TTBCCHHHHHHHHTTCCSSCSSHHHH-HHHHHHHHHHCSSCCHHHHHHHTTTCCCSSSCSHHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHhCCccCccccHhH-HHHHHHHHHcCCCCCHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHhc
Confidence 34455566777778888899999998 999999987654 8999999998876666655555443
No 207
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=27.48 E-value=91 Score=23.32 Aligned_cols=38 Identities=18% Similarity=0.375 Sum_probs=30.0
Q ss_pred CCeEEEEecCCCchhh--HHHHHHHHHhCCCeEEEEeeCC
Q 023800 160 SPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVAD 197 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e--~~~~~~~l~~a~~~v~~vs~~~ 197 (277)
.+++.|++.||....+ ...+.+.++..|.++..++...
T Consensus 122 ~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~ 161 (178)
T 2xgg_A 122 VPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGH 161 (178)
T ss_dssp SCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC-
T ss_pred CCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCC
Confidence 3689999999976554 6777888888999998888754
No 208
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=26.97 E-value=47 Score=25.41 Aligned_cols=98 Identities=17% Similarity=0.206 Sum_probs=52.3
Q ss_pred CeEEEEecCCC---chhh--HHHHHHHHHhCC--CeEEEEeeCCCceEEccc-------Cc---EEEe---------Ccc
Q 023800 161 PQILVPIANGS---EEME--AVIIIDILRRAK--ANVVVASVADKLEILASC-------QV---KLVA---------DML 214 (277)
Q Consensus 161 ~kV~ill~~g~---~~~e--~~~~~~~l~~a~--~~v~~vs~~~~~~v~~~~-------g~---~i~~---------~~~ 214 (277)
+||+++....- ..++ .-.+.+.++.+| .+++++..... .+..-. .- ...+ +..
T Consensus 2 mkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~-~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 80 (201)
T 1t5b_A 2 SKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAAN-PVPVLDGELVGAMRPGDAPLTPRQQDALALSDEL 80 (201)
T ss_dssp CEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTS-CCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCC-CCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHH
Confidence 57888776433 2222 234566677665 88998887643 221000 00 0001 011
Q ss_pred hhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHH----------------cCCcEEEEchh
Q 023800 215 IDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKE----------------SNRPYGAICAS 264 (277)
Q Consensus 215 ~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~----------------~~~~i~aiC~G 264 (277)
.+++ ..+|.||+..-. ....-...+..||-+... .+|+++.++++
T Consensus 81 ~~~l--~~aD~iv~~~P~---y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~ 141 (201)
T 1t5b_A 81 IAEL--KAHDVIVIAAPM---YNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSR 141 (201)
T ss_dssp HHHH--HHCSEEEEECCC---BTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEEC
T ss_pred HHHH--HhCCEEEEEeCc---ccCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEec
Confidence 2222 368999886532 223346678888887652 57887777653
No 209
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=26.94 E-value=36 Score=28.66 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=28.5
Q ss_pred ccChHHHHHHHHHHhCC-CEEEEEchhHHHHHHHc
Q 023800 58 KESEVLESIVKKQASDG-RLYAAICVFLAVALGSW 91 (277)
Q Consensus 58 ~~~~~~~~~l~~~~~~g-~~i~aiC~g~~~~La~a 91 (277)
.....+.+.|++.+++| .++++.|+|+. +++..
T Consensus 128 l~~t~l~~~L~~~~~~G~~~~~GtSAGA~-i~~~~ 161 (291)
T 3en0_A 128 LADTPLMDRIRQRVHNGEISLAGTSAGAA-VMGHH 161 (291)
T ss_dssp HTTCHHHHHHHHHHHTTSSEEEEETHHHH-TTSSE
T ss_pred HHhCCHHHHHHHHHHCCCeEEEEeCHHHH-hhhHh
Confidence 46678889999999999 89999999998 77654
No 210
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=25.87 E-value=8.1 Score=29.61 Aligned_cols=57 Identities=12% Similarity=0.039 Sum_probs=42.5
Q ss_pred HHHHHHHhCCCEEEEEchhHHHHHHHcCCCCCCC-----------CCCeEcCCCCCCHHHHHHHHHHHh
Q 023800 65 SIVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------DGKVVTTRGPGTPMEFVVALVEQL 122 (277)
Q Consensus 65 ~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------dg~~iT~~g~~~~~~~a~~li~~l 122 (277)
..-+.+.+.+..-.+.|+..+ +++...+|+..+ +||+.-+.|...-.+......+.+
T Consensus 87 p~q~a~~~~~~~qCG~Ctpg~-im~a~~ll~~~~~pt~~~i~~~l~gnlcRCtgy~~i~~A~~~~~~~~ 154 (161)
T 1rm6_C 87 KLQAAFHEKLGTQCGFCTPGM-IMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVKIIKSVETAAAAR 154 (161)
T ss_dssp HHHHHHHHHTCCSSCSSHHHH-HHHHHHHHHHCSSCCHHHHHHHTTTCCCSSSCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcCCCCchHH-HHHHHHHHhcCCCCCHHHHHHHHcCCeECCCCCHHHHHHHHHHHHHH
Confidence 344555556668899999998 899888886544 899999999887666666555443
No 211
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=25.84 E-value=68 Score=26.21 Aligned_cols=39 Identities=5% Similarity=-0.178 Sum_probs=25.4
Q ss_pred CCCeEEEEecCC--------CchhhHHHHHHHHHhCCCeEEEEeeCC
Q 023800 159 NSPQILVPIANG--------SEEMEAVIIIDILRRAKANVVVASVAD 197 (277)
Q Consensus 159 ~~~kV~ill~~g--------~~~~e~~~~~~~l~~a~~~v~~vs~~~ 197 (277)
++.+|++++.+. |...-+.+..+.+++.|+++.++....
T Consensus 21 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 67 (305)
T 3huu_A 21 KTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTRMTVSEN 67 (305)
T ss_dssp CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEEECCCSS
T ss_pred CCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457899998761 222224556667777899998875543
No 212
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=24.83 E-value=1.7e+02 Score=23.21 Aligned_cols=40 Identities=23% Similarity=-0.017 Sum_probs=27.5
Q ss_pred CCCeEEEEecCC---CchhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 159 ~~~kV~ill~~g---~~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
++.+|++++.+- |...-+.+..+.+++.|+++.++.....
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~ 48 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANAD 48 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTC
T ss_pred CCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 457899998653 2233355667777888999988876653
No 213
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=24.79 E-value=1.1e+02 Score=28.59 Aligned_cols=62 Identities=13% Similarity=0.121 Sum_probs=45.0
Q ss_pred hHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCHHHHHHHHHHHHc
Q 023800 175 EAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKES 254 (277)
Q Consensus 175 e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~ 254 (277)
++...+.+|.++|+.+++++++. + .+.|++||+|.-. .-.+++.+.|++ +-
T Consensus 426 ~~~~~y~al~~~g~~vd~v~~~~-------------------~--l~~y~lvv~P~~~------~~~~~~~~~L~~--~G 476 (645)
T 1kwg_A 426 LVYLFYSALRRLGLDVDVVPPGA-------------------S--LRGYAFAVVPSLP------IVREEALEAFRE--AE 476 (645)
T ss_dssp HHHHHHHHHHTTTCCEEEECTTS-------------------C--CTTCSEEEESCCS------SCCHHHHHHHHT--CS
T ss_pred HHHHHHHHHHHhCCCeeEECCCC-------------------C--cccCCEEEEechh------hcCHHHHHHHHh--CC
Confidence 35678889999999999997642 1 2479999999853 235677777877 66
Q ss_pred CCcEEEEchhh
Q 023800 255 NRPYGAICASP 265 (277)
Q Consensus 255 ~~~i~aiC~G~ 265 (277)
|..|++-.+|.
T Consensus 477 G~lv~~~~sg~ 487 (645)
T 1kwg_A 477 GPVLFGPRSGS 487 (645)
T ss_dssp SCEEECTTTTC
T ss_pred CEEEEeccCCc
Confidence 67777666664
No 214
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=24.66 E-value=83 Score=26.73 Aligned_cols=39 Identities=23% Similarity=0.192 Sum_probs=30.3
Q ss_pred CCCeEEEEecCCC-chhhHHHHHHHHHhCCCeEEEEeeCC
Q 023800 159 NSPQILVPIANGS-EEMEAVIIIDILRRAKANVVVASVAD 197 (277)
Q Consensus 159 ~~~kV~ill~~g~-~~~e~~~~~~~l~~a~~~v~~vs~~~ 197 (277)
++|||.|+.+++. ...-+......|+.+|++|.+++...
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~ 60 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGD 60 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcc
Confidence 4689999988854 34445677888999999999998653
No 215
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=23.81 E-value=1.1e+02 Score=24.24 Aligned_cols=39 Identities=13% Similarity=0.017 Sum_probs=26.7
Q ss_pred CCeEEEEecCCC---chhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 160 SPQILVPIANGS---EEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 160 ~~kV~ill~~g~---~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
+++|++++.+-. ...-+.+..+.+++.|+++.++..+..
T Consensus 2 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 43 (272)
T 3o74_A 2 TRTLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQ 43 (272)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred ceEEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 468999987532 233345666777888999988876543
No 216
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=23.53 E-value=1.5e+02 Score=25.24 Aligned_cols=39 Identities=15% Similarity=0.099 Sum_probs=28.3
Q ss_pred CCeEEEEecC------CCchhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 160 SPQILVPIAN------GSEEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 160 ~~kV~ill~~------g~~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
+|||+++... |-...-+......|.+.|++|.++++...
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~ 46 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHG 46 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTT
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 5799998843 22223356677889999999999997654
No 217
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=23.40 E-value=1.1e+02 Score=25.91 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=27.6
Q ss_pred CCCeEEEEecC-----CCchhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 159 NSPQILVPIAN-----GSEEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 159 ~~~kV~ill~~-----g~~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
++|||+++... |-...-+....+.|...|++|.+++....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 63 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASP 63 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCT
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCc
Confidence 56899999842 11223456677888899999999988754
No 218
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=23.21 E-value=76 Score=23.71 Aligned_cols=86 Identities=19% Similarity=0.176 Sum_probs=41.3
Q ss_pred CCeEEEEecCCCchhh-H-HHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 160 SPQILVPIANGSEEME-A-VIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e-~-~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
++++.|+-+...--++ + -.+.+.+...|++++++..+.. ...++ .++|.|++.....+...
T Consensus 9 ~~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~d~ii~g~pt~g~G~ 71 (167)
T 1ykg_A 9 MPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDY---------------KFKQI--ASEKLLIVVTSTQGEGE 71 (167)
T ss_dssp ---CEEEEECSSSHHHHHHHHHHHHHHHHTCCCEEEEGGGC---------------CGGGG--GGCSEEEEEEECBGGGB
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEeehhhC---------------CHHHh--ccCCeEEEEEcccCCCc
Confidence 4577777665443333 2 2345556666777776654321 11222 35788877542211111
Q ss_pred hhcCHHHHHHHHHHH------HcCCcEEEEchh
Q 023800 238 FAKSKKLVNMLKKQK------ESNRPYGAICAS 264 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~------~~~~~i~aiC~G 264 (277)
..+.+..|++... -+++.++.+|.|
T Consensus 72 --~p~~~~~f~~~l~~~~~~~l~~k~~avfg~G 102 (167)
T 1ykg_A 72 --PPEEAVALHKFLFSKKAPKLENTAFAVFSLG 102 (167)
T ss_dssp --CCGGGHHHHHHHTSTTCCCCTTCEEEEEEEC
T ss_pred --CChhHHHHHHHHHhccccccCCCEEEEEeec
Confidence 1223344444432 236778877755
No 219
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=22.35 E-value=17 Score=27.83 Aligned_cols=61 Identities=16% Similarity=0.063 Sum_probs=46.1
Q ss_pred ChHHHHHHHHHHhCCCEEEEEchhHHHHHHHcCCCCCCC-----------CCCeEcCCCCCCHHHHHHHHHHH
Q 023800 60 SEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------DGKVVTTRGPGTPMEFVVALVEQ 121 (277)
Q Consensus 60 ~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------dg~~iT~~g~~~~~~~a~~li~~ 121 (277)
+..+..+-+.|.+.+..=.+.|+-.+ +++...||+... +||+--+.|...-++-.....+.
T Consensus 83 ~~~l~pvq~af~~~~~~QCGfCtpG~-ims~~all~~~~~pt~~eI~~al~GNlCRCtgY~~I~~Av~~aa~~ 154 (160)
T 3hrd_D 83 DGKPSLLQQCFLEAGAVQCGYCTPGM-ILTAKALLDKNPDPTDEEITVAMSGNLCRCTGYIKIHAAVRYAVER 154 (160)
T ss_dssp TTBCCHHHHHHHHHTCCSSCSSHHHH-HHHHHHHHTTCSSCCHHHHHHHHTTCCCSSSCSHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHcCCCcCCcchhhH-HHHHHHHHHhCCCCCHHHHHHHHcCCCCCCCCcHHHHHHHHHHHHH
Confidence 33455666677777888899999999 999999998765 99999998887665555544443
No 220
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=22.24 E-value=1.1e+02 Score=25.17 Aligned_cols=37 Identities=19% Similarity=0.203 Sum_probs=31.8
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
|||++--=||.....+....+.|+..| +|.+|+|+.+
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~g-~V~VVAP~~~ 38 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 577666668999999999999999988 9999999865
No 221
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=22.08 E-value=1.5e+02 Score=25.54 Aligned_cols=80 Identities=11% Similarity=0.067 Sum_probs=42.8
Q ss_pred CCCCeEEEEecCCCc---hhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcch
Q 023800 158 DNSPQILVPIANGSE---EMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG 234 (277)
Q Consensus 158 ~~~~kV~ill~~g~~---~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~ 234 (277)
.++.+|++++ |..+ ..=+.++.+.+++.|+++.+...+.. ...+..+.....|.||+..
T Consensus 23 ~~s~~Igvv~-~~~~~f~~~l~~gi~~~a~~~g~~~~i~~~~~~-------------~~~i~~l~~~~vDGiIi~~---- 84 (412)
T 4fe7_A 23 TKRHRITLLF-NANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF-------------RARIDKIKDWLGDGVIADF---- 84 (412)
T ss_dssp CCCEEEEEEC-CTTSHHHHHHHHHHHHHHHHHTCCEEEEECC-C-------------C--------CCCSEEEEET----
T ss_pred CCCceEEEEe-CCcchhhHHHHHHHHHHHHhcCCCeEEEecCCc-------------cchhhhHhcCCCCEEEEec----
Confidence 3457899988 4222 22245566677778999988864332 0112222234689998831
Q ss_pred HHhhhcCHHHHHHHHHHHHcCCcEEEEch
Q 023800 235 AQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (277)
Q Consensus 235 ~~~~~~~~~~~~~l~~~~~~~~~i~aiC~ 263 (277)
.+++ .++...+.+.++..+..
T Consensus 85 -----~~~~---~~~~l~~~~iPvV~i~~ 105 (412)
T 4fe7_A 85 -----DDKQ---IEQALADVDVPIVGVGG 105 (412)
T ss_dssp -----TCHH---HHHHHTTCCSCEEEEEE
T ss_pred -----CChH---HHHHHhhCCCCEEEecC
Confidence 1222 34444566888877653
No 222
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=21.79 E-value=2.5e+02 Score=22.44 Aligned_cols=39 Identities=18% Similarity=0.068 Sum_probs=25.7
Q ss_pred CCCeEEEEecCCCc---hhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 159 NSPQILVPIANGSE---EMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 159 ~~~kV~ill~~g~~---~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
++.+|++++ +-.+ ..-+.+..+.+++.||++.+......
T Consensus 11 ~~~~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 52 (289)
T 3k9c_A 11 SSRLLGVVF-ELQQPFHGDLVEQIYAAATRRGYDVMLSAVAPS 52 (289)
T ss_dssp --CEEEEEE-ETTCHHHHHHHHHHHHHHHHTTCEEEEEEEBTT
T ss_pred CCCEEEEEE-ecCCchHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 457899998 5322 22345666777888999988876653
No 223
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=21.72 E-value=39 Score=26.39 Aligned_cols=103 Identities=9% Similarity=0.041 Sum_probs=48.1
Q ss_pred CCCeEEEEecC---CCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCc--chhhhccCCccEEEEcCCcc
Q 023800 159 NSPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADM--LIDEAAKLSYDLIVLPGGLG 233 (277)
Q Consensus 159 ~~~kV~ill~~---g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~--~~~~~~~~~~D~livpGG~~ 233 (277)
|+|+|+|++.. +-.-..++..+..+...+.+++++.... .|+....--.-.|+. .+.+ .....|++|+..-..
T Consensus 1 M~k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~d-LP~~~~d~~~~~p~~~~~l~~-~i~~aD~~ii~tPeY 78 (190)
T 3u7r_A 1 MVKTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIGD-LPHYNDDLWADAPESVLRLKD-RIEHSDAVLAITPEY 78 (190)
T ss_dssp -CEEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGGG-SCCCCGGGGGGCCHHHHHHHH-HHHTSSEEEEECCCB
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEeccc-CCCCCCCcccCCCHHHHHHHH-HHHhCCcEEEechhh
Confidence 45789988864 2222233333344445678888887643 243211100000110 1111 123578888864221
Q ss_pred hHHhhhcCHHHHHHHHHHHH----cCCcEEEEch
Q 023800 234 GAQAFAKSKKLVNMLKKQKE----SNRPYGAICA 263 (277)
Q Consensus 234 ~~~~~~~~~~~~~~l~~~~~----~~~~i~aiC~ 263 (277)
.-.--...+.+++|+.+-+. .+|+++-+++
T Consensus 79 n~s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~~ 112 (190)
T 3u7r_A 79 NRSYPGMIKNAIDWATRPYGQNSWKGKPAAVIGT 112 (190)
T ss_dssp TTBCCHHHHHHHHHHHCSTTCCTTTTCEEEEEEE
T ss_pred cccCCHHHHHHHHHhcccccCCccCCCEEEEEEe
Confidence 10001123456677753222 5788887764
No 224
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=21.59 E-value=1.7e+02 Score=24.38 Aligned_cols=39 Identities=13% Similarity=0.074 Sum_probs=25.3
Q ss_pred CCCeEEEEecCC---CchhhHHHHHHHHHhCCCeEEEEeeCC
Q 023800 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVAD 197 (277)
Q Consensus 159 ~~~kV~ill~~g---~~~~e~~~~~~~l~~a~~~v~~vs~~~ 197 (277)
++..|++++.+- |...-+.+..+.+++.||++.+...+.
T Consensus 69 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 110 (355)
T 3e3m_A 69 RSGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAY 110 (355)
T ss_dssp --CEEEEEESCSBCHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 346799988653 222334566677788899998876654
No 225
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=21.50 E-value=1.3e+02 Score=25.04 Aligned_cols=99 Identities=10% Similarity=-0.040 Sum_probs=52.9
Q ss_pred CCCeEEEEecC----CCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCc---chhhhccCCccEEEEcCC
Q 023800 159 NSPQILVPIAN----GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADM---LIDEAAKLSYDLIVLPGG 231 (277)
Q Consensus 159 ~~~kV~ill~~----g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~---~~~~~~~~~~D~livpGG 231 (277)
.++||+++... ++...=+-.+.+.+...|.+++++....- ++...... ..++. ..+.+ ...|+||+..-
T Consensus 57 ~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~eveiidL~dl-pl~~~d~~-~~~d~v~~l~e~I--~~ADgiV~aSP 132 (279)
T 2fzv_A 57 PPVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPSDL-PLPDQVQS-DDHPAVKELRALS--EWSEGQVWCSP 132 (279)
T ss_dssp SCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCTTC-CCTTTSGG-GCCHHHHHHHHHH--HHCSEEEEEEE
T ss_pred CCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCEEEEEehhcC-CCCccCcc-CCCHHHHHHHHHH--HHCCeEEEEcC
Confidence 45789888864 33333344566777888999999988664 54432211 01110 11222 35788888641
Q ss_pred cchHHhhhcCHHHHHHHHHHH--------HcCCcEEEEchh
Q 023800 232 LGGAQAFAKSKKLVNMLKKQK--------ESNRPYGAICAS 264 (277)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~--------~~~~~i~aiC~G 264 (277)
. ....-...+..||-+.. -++|+++.++++
T Consensus 133 ~---Yn~sipg~LKn~IDrl~~~~g~~~~l~gK~v~lv~ts 170 (279)
T 2fzv_A 133 E---RHGQITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVS 170 (279)
T ss_dssp E---ETTEECHHHHHHHHHSCSCBTTBCSSTTCEEEEEEEC
T ss_pred c---cccCcCHHHHHHHHHHhhhcccccccCCCEEEEEEEC
Confidence 1 11122344444444332 147887777663
No 226
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=21.45 E-value=1.1e+02 Score=21.76 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=42.4
Q ss_pred HHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhcCH--HHHHHHHHHHH-
Q 023800 177 VIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSK--KLVNMLKKQKE- 253 (277)
Q Consensus 177 ~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~--~~~~~l~~~~~- 253 (277)
-.+.+.++..|++++++..... ...++ .++|.|++...... ....| .+.+|+.+...
T Consensus 17 ~~ia~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~d~iiig~pty~---~g~~p~~~~~~fl~~l~~~ 76 (138)
T 5nul_A 17 ELIAKGIIESGKDVNTINVSDV---------------NIDEL--LNEDILILGCSAMT---DEVLEESEFEPFIEEISTK 76 (138)
T ss_dssp HHHHHHHHHTTCCCEEEEGGGC---------------CHHHH--TTCSEEEEEECCBT---TTBCCTTTHHHHHHHHGGG
T ss_pred HHHHHHHHHCCCeEEEEEhhhC---------------CHHHH--hhCCEEEEEcCccC---CCCCChHHHHHHHHHHHhh
Confidence 4456777888888888866432 11233 46898888643211 11122 46677776553
Q ss_pred -cCCcEEEEchhhH
Q 023800 254 -SNRPYGAICASPA 266 (277)
Q Consensus 254 -~~~~i~aiC~G~~ 266 (277)
++|+++.++++.+
T Consensus 77 l~~k~~~~f~t~g~ 90 (138)
T 5nul_A 77 ISGKKVALFGSYGW 90 (138)
T ss_dssp CTTCEEEEEEEESS
T ss_pred cCCCEEEEEEecCC
Confidence 7888888887544
No 227
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=20.77 E-value=3.9e+02 Score=22.63 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=52.1
Q ss_pred CCeEEEEecCCCchhh--HHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHh
Q 023800 160 SPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e--~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~ 237 (277)
.+||.|+-+...--++ .-...+.+...|.+++++..... . .+....++ .++|.|++......
T Consensus 252 ~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~~~-~----------~~~~~~~~--~~~d~ii~gsp~~~--- 315 (402)
T 1e5d_A 252 TNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKAC-H----------HSQIMSEI--SDAGAVIVGSPTHN--- 315 (402)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETTTS-C----------HHHHHHHH--HTCSEEEEECCCBT---
T ss_pred CCcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HHCCEEEEECCccC---
Confidence 4688888766544333 23355667777888877765432 0 01111222 46899999764321
Q ss_pred hhcCHHHHHHHHHHHH---cCCcEEEEchhh
Q 023800 238 FAKSKKLVNMLKKQKE---SNRPYGAICASP 265 (277)
Q Consensus 238 ~~~~~~~~~~l~~~~~---~~~~i~aiC~G~ 265 (277)
....+.+.+|+.+... ++|.++.+|+..
T Consensus 316 ~~~~~~~~~~l~~l~~~~l~~k~~~~f~t~g 346 (402)
T 1e5d_A 316 NGILPYVAGTLQYIKGLRPQNKIGGAFGSFG 346 (402)
T ss_dssp TBCCHHHHHHHHHHHHTCCCSCEEEEEEEES
T ss_pred CCchHHHHHHHHHhhhcccCCCEEEEEEcCC
Confidence 1234457777776554 688888877653
No 228
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=20.77 E-value=1.3e+02 Score=24.81 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=31.7
Q ss_pred CCCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCC
Q 023800 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADK 198 (277)
Q Consensus 159 ~~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~ 198 (277)
+++||++--=||.....+....+.|+. +.+|.+|+|+.+
T Consensus 10 ~~m~ILlTNDDGi~apGi~aL~~~l~~-~~~V~VVAP~~~ 48 (261)
T 3ty2_A 10 PKLRLLLSNDDGVYAKGLAILAKTLAD-LGEVDVVAPDRN 48 (261)
T ss_dssp -CCEEEEECSSCTTCHHHHHHHHHHTT-TSEEEEEEESSC
T ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHh-cCCEEEEecCCC
Confidence 346766666689999999999999988 679999999865
No 229
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=20.64 E-value=1.1e+02 Score=26.55 Aligned_cols=95 Identities=14% Similarity=0.004 Sum_probs=53.3
Q ss_pred CeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceEEcccCcEEEeCcchhhhccCCccEEEEcCCcchHHhhhc
Q 023800 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (277)
Q Consensus 161 ~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~ 240 (277)
+|+.|+.-++.... .....+.|..+|+++.++...++++-.+...+.-. -..+.+......|.|+-.||- ..-
T Consensus 44 ~rvlIVtd~~v~~~-~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~-~~~l~~~~~~r~d~IIavGGG-sv~---- 116 (368)
T 3qbe_A 44 HKVAVVHQPGLAET-AEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFI-WEVLGRIGIGRKDALVSLGGG-AAT---- 116 (368)
T ss_dssp SEEEEEECGGGHHH-HHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHH-HHHHHHHTCCTTCEEEEEESH-HHH----
T ss_pred CEEEEEECccHHHH-HHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHH-HHHHHHcCCCCCcEEEEECCh-HHH----
Confidence 67877766665554 55577788889999877665443121111000000 001111112346888888874 233
Q ss_pred CHHHHHHHHHHHHcCCcEEEEchh
Q 023800 241 SKKLVNMLKKQKESNRPYGAICAS 264 (277)
Q Consensus 241 ~~~~~~~l~~~~~~~~~i~aiC~G 264 (277)
++..++...+.+|.++..|-|-
T Consensus 117 --D~ak~~Aa~~~rgip~i~IPTT 138 (368)
T 3qbe_A 117 --DVAGFAAATWLRGVSIVHLPTT 138 (368)
T ss_dssp --HHHHHHHHHGGGCCEEEEEECS
T ss_pred --HHHHHHHHHhccCCcEEEECCC
Confidence 3345666667889999988874
No 230
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=20.63 E-value=69 Score=26.48 Aligned_cols=94 Identities=11% Similarity=0.109 Sum_probs=51.6
Q ss_pred CCeEEEEecCCCchhhHHHHHHHHHhCCCeEEEEeeCCCceE--EcccCc---EEEeCcchhhhccCCccEEEEcCCcch
Q 023800 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEI--LASCQV---KLVADMLIDEAAKLSYDLIVLPGGLGG 234 (277)
Q Consensus 160 ~~kV~ill~~g~~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v--~~~~g~---~i~~~~~~~~~~~~~~D~livpGG~~~ 234 (277)
++||+|+ --|..-. .....|.++|.+|.++..+.. .+ ....|. .+..+ ..+.+ ...+|+|+++-=
T Consensus 2 ~mkI~ii-GaGa~G~---~~a~~L~~~g~~V~~~~r~~~-~~~~~~~~g~~~~~~~~~-~~~~~-~~~~D~vilavk--- 71 (294)
T 3g17_A 2 SLSVAII-GPGAVGT---TIAYELQQSLPHTTLIGRHAK-TITYYTVPHAPAQDIVVK-GYEDV-TNTFDVIIIAVK--- 71 (294)
T ss_dssp -CCEEEE-CCSHHHH---HHHHHHHHHCTTCEEEESSCE-EEEEESSTTSCCEEEEEE-EGGGC-CSCEEEEEECSC---
T ss_pred CcEEEEE-CCCHHHH---HHHHHHHHCCCeEEEEEeccC-cEEEEecCCeeccceecC-chHhc-CCCCCEEEEeCC---
Confidence 4678887 3443333 333456677888888876643 22 223342 12211 11111 146899998742
Q ss_pred HHhhhcCHHHHHHHHHHHHcCCcEEEEchhhH
Q 023800 235 AQAFAKSKKLVNMLKKQKESNRPYGAICASPA 266 (277)
Q Consensus 235 ~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~ 266 (277)
.. ..+++++.++.....+..|.++..|.-
T Consensus 72 ~~---~~~~~l~~l~~~l~~~~~iv~~~nGi~ 100 (294)
T 3g17_A 72 TH---QLDAVIPHLTYLAHEDTLIILAQNGYG 100 (294)
T ss_dssp GG---GHHHHGGGHHHHEEEEEEEEECCSSCC
T ss_pred cc---CHHHHHHHHHHhhCCCCEEEEeccCcc
Confidence 11 233455566666666778888888864
No 231
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=20.11 E-value=2.3e+02 Score=23.36 Aligned_cols=39 Identities=3% Similarity=-0.108 Sum_probs=25.7
Q ss_pred CCCeEEEEecCC---CchhhHHHHHHHHHhCCCeEEEEeeCC
Q 023800 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVAD 197 (277)
Q Consensus 159 ~~~kV~ill~~g---~~~~e~~~~~~~l~~a~~~v~~vs~~~ 197 (277)
++.+|++++.+- |...-+.+..+.+++.||++.+.....
T Consensus 57 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 98 (340)
T 1qpz_A 57 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWN 98 (340)
T ss_dssp CCSEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 457899998643 222234566677788899998875543
Done!