BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023801
(277 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana
Length = 322
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/275 (73%), Positives = 226/275 (82%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RIG+SMISDAE KGLI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRI
Sbjct: 48 RIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRI 107
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
IL AFG ELVLTDPAKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WK
Sbjct: 108 ILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWK 167
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
G+GG+ID VS K+LKE+N N+KLYG+EP ES +LSGGKPGPHKIQGIG
Sbjct: 168 GTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIG 227
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
AGF+P VL V++IDEVVQVSSDE+I+ A+ LALKEGL V +RPENA
Sbjct: 228 AGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENA 287
Query: 243 GKLIVVIFPSFGERYLSSVLFESVRKEAESMTFEA 277
GKL V IFPSFGERYLS+VLF++ RKEAE+MTFEA
Sbjct: 288 GKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFEA 322
>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana
O-Acetylserine Sulfhydrylase K46a Mutant
Length = 322
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/275 (73%), Positives = 226/275 (82%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RIG+SMISDAE KGLI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRI
Sbjct: 48 RIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRI 107
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
IL AFG ELVLTDPAKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WK
Sbjct: 108 ILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWK 167
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
G+GG+ID VS K+LKE+N N+KLYG+EP ES +LSGGKPGPHKIQGIG
Sbjct: 168 GTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIG 227
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
AGF+P VL V++IDEVVQVSSDE+I+ A+ LALKEGL V +RPENA
Sbjct: 228 AGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENA 287
Query: 243 GKLIVVIFPSFGERYLSSVLFESVRKEAESMTFEA 277
GKL V IFPSFGERYLS+VLF++ RKEAE+MTFEA
Sbjct: 288 GKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFEA 322
>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From
Arabidopsis Thaliana In Complex With C-Terminal Peptide
From Arabidopsis Serine Acetyltransferase
Length = 320
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/275 (73%), Positives = 226/275 (82%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RIG+SMISDAE KGLI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRI
Sbjct: 46 RIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRI 105
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
IL AFG ELVLTDPAKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WK
Sbjct: 106 ILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWK 165
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
G+GG+ID VS K+LKE+N N+KLYG+EP ES +LSGGKPGPHKIQGIG
Sbjct: 166 GTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIG 225
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
AGF+P VL V++IDEVVQVSSDE+I+ A+ LALKEGL V +RPENA
Sbjct: 226 AGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENA 285
Query: 243 GKLIVVIFPSFGERYLSSVLFESVRKEAESMTFEA 277
GKL V IFPSFGERYLS+VLF++ RKEAE+MTFEA
Sbjct: 286 GKLFVAIFPSFGERYLSTVLFDATRKEAEAMTFEA 320
>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
pdb|4AEC|B Chain B, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl-
Serine-(Thiol)-Lyase C
Length = 430
Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/274 (66%), Positives = 219/274 (79%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RIGYSM++DAE KG I+PG+SVL+EPTSGNTGIGLAF+AA++ YRLI+TMPASMS+ERR+
Sbjct: 156 RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRV 215
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+L+AFGAELVLTDPAKGM GAVQKAEEIL TP+AYMLQQF+NPANPKIHYETTGPE+W
Sbjct: 216 LLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWD 275
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
+ G++D V+ +F+KEKNP ++ G+EPTES +LSGGKPGPHKIQGIG
Sbjct: 276 DTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIG 335
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
AGF+P L+ I+DEV+ +SS+EAIETAK LALKEGL V KRPENA
Sbjct: 336 AGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENA 395
Query: 243 GKLIVVIFPSFGERYLSSVLFESVRKEAESMTFE 276
GKLI V+FPSFGERYLS+ LF+S+R+E E M E
Sbjct: 396 GKLIAVVFPSFGERYLSTPLFQSIREEVEKMQPE 429
>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|E Chain E, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
pdb|3VC3|F Chain F, Crystal Structure Of Beta-Cyanoalanine Synthase K95a
Mutant In Soybean
Length = 344
Score = 332 bits (850), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 204/271 (75%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R Y+MI+DAE K LITPG++ LIEPTSGN GI +AFMAA K Y++++TMP+ SLERR+
Sbjct: 68 RPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRV 127
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+RAFGAEL+LTDPAKGM G V+KA E+L TPNA+MLQQF NPAN ++H+ETTGPE+W+
Sbjct: 128 TMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWE 187
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
+ G++D V ++LK KNPN+K+YG+EP+ES VL+GGKPGPH I G G
Sbjct: 188 DTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNG 247
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
GF P +L+++++++V++VSS++A+ A++LALKEGL V + PEN
Sbjct: 248 VGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQLPENK 307
Query: 243 GKLIVVIFPSFGERYLSSVLFESVRKEAESM 273
GKLIV + PSFGERYLSSVLF+ +R+EAE+M
Sbjct: 308 GKLIVTVHPSFGERYLSSVLFQELRQEAENM 338
>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|B Chain B, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|C Chain C, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
pdb|3VBE|D Chain D, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean
Length = 344
Score = 331 bits (849), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 204/271 (75%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R Y+MI+DAE K LITPG++ LIEPTSGN GI +AFMAA K Y++++TMP+ SLERR+
Sbjct: 68 RPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRV 127
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+RAFGAEL+LTDPAKGM G V+KA E+L TPNA+MLQQF NPAN ++H+ETTGPE+W+
Sbjct: 128 TMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWE 187
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
+ G++D V ++LK KNPN+K+YG+EP+ES VL+GGKPGPH I G G
Sbjct: 188 DTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNG 247
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
GF P +L+++++++V++VSS++A+ A++LALKEGL V + PEN
Sbjct: 248 VGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQLPENK 307
Query: 243 GKLIVVIFPSFGERYLSSVLFESVRKEAESM 273
GKLIV + PSFGERYLSSVLF+ +R+EAE+M
Sbjct: 308 GKLIVTVHPSFGERYLSSVLFQELRQEAENM 338
>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine
Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc
Baa-535 M
Length = 314
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 184/262 (70%), Gaps = 3/262 (1%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RIG +MI AE GLI P +++++EPTSGNTGI LA ++AA+ Y+ ++TMP +MS+ERR+
Sbjct: 50 RIGVAMIDAAEKAGLIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRM 108
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELW 121
+LRA+GAELVLT A+GM GA+ KAEE LAKT + Y + QQFENPANP +H TT E+W
Sbjct: 109 LLRAYGAELVLTPGAEGMAGAIAKAEE-LAKTDDRYFIPQQFENPANPAVHAVTTAEEVW 167
Query: 122 KGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGI 181
+ + G++D VS + +K++ P+ + +EP SPVLSGG+ GPH IQGI
Sbjct: 168 RDTDGKVDIFVSGVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQKGPHPIQGI 227
Query: 182 GAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPEN 241
GAGFVP VL++ ++DEV+ V +D+A+E A+ +A +EGL V RPEN
Sbjct: 228 GAGFVPPVLDLALVDEVITVGNDDALELARRMATEEGLLVGISSGAAVWAARELAHRPEN 287
Query: 242 AGKLIVVIFPSFGERYLSSVLF 263
AGKLIVV+ P FGERYLS+VLF
Sbjct: 288 AGKLIVVVLPDFGERYLSTVLF 309
>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis
pdb|2Q3C|A Chain A, 2.1 A Resolution Crystal Structure Of O-Acetylserine
Sulfhydrylase (Oass) Holoenzyme From Mycobacterium
Tuberculosis In Complex With The Inhibitory Peptide Dfsi
Length = 313
Score = 274 bits (701), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/265 (50%), Positives = 182/265 (68%), Gaps = 3/265 (1%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RIG +M+ AE GLI P +++++EPTSGNTGI LA + AA+ YR ++TMP +MSLERR+
Sbjct: 49 RIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRM 107
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELW 121
+LRA+GAEL+LT A GM GA+ KAEE LAKT Y + QQFENPANP IH TT E+W
Sbjct: 108 LLRAYGAELILTPGADGMSGAIAKAEE-LAKTDQRYFVPQQFENPANPAIHRVTTAEEVW 166
Query: 122 KGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGI 181
+ + G++D +V+ + +KE+ P+ + +EP SPVLSGG+ GPH IQGI
Sbjct: 167 RDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGI 226
Query: 182 GAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPEN 241
GAGFVP VL+ +++DE++ V +++A+ A+ LA +EGL V +RPEN
Sbjct: 227 GAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPEN 286
Query: 242 AGKLIVVIFPSFGERYLSSVLFESV 266
AGKLIVV+ P FGERYLS+ LF V
Sbjct: 287 AGKLIVVVLPDFGERYLSTPLFADV 311
>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine
Sulfhydrylase (oass) From Mycobacterium Tuberculosis In
Complex With The Reaction Intermediate
Alpha-aminoacrylate
Length = 313
Score = 274 bits (701), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/265 (50%), Positives = 182/265 (68%), Gaps = 3/265 (1%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RIG +M+ AE GLI P +++++EPTSGNTGI LA + AA+ YR ++TMP +MSLERR+
Sbjct: 49 RIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRM 107
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELW 121
+LRA+GAEL+LT A GM GA+ KAEE LAKT Y + QQFENPANP IH TT E+W
Sbjct: 108 LLRAYGAELILTPGADGMSGAIAKAEE-LAKTDQRYFVPQQFENPANPAIHRVTTAEEVW 166
Query: 122 KGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGI 181
+ + G++D +V+ + +KE+ P+ + +EP SPVLSGG+ GPH IQGI
Sbjct: 167 RDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGI 226
Query: 182 GAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPEN 241
GAGFVP VL+ +++DE++ V +++A+ A+ LA +EGL V +RPEN
Sbjct: 227 GAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPEN 286
Query: 242 AGKLIVVIFPSFGERYLSSVLFESV 266
AGKLIVV+ P FGERYLS+ LF V
Sbjct: 287 AGKLIVVVLPDFGERYLSTPLFADV 311
>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|B Chain B, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|C Chain C, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
pdb|4I1Y|D Chain D, The Structure Of Cysteine Synthase From Mycobacterium
Ulcerans Agy99
Length = 314
Score = 274 bits (700), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/262 (51%), Positives = 183/262 (69%), Gaps = 3/262 (1%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RIG +MI AE GLI P +++++EPTSGNTGI LA ++AA+ Y+ ++TMP +MS+ERR+
Sbjct: 50 RIGVAMIDAAEKAGLIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRM 108
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELW 121
+LRA+GAELVLT A+GM GA+ KAEE LAKT + Y + QQFENPANP +H TT E+W
Sbjct: 109 LLRAYGAELVLTPGAEGMAGAIAKAEE-LAKTDDRYFIPQQFENPANPAVHAVTTAEEVW 167
Query: 122 KGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGI 181
+ + G++D VS + +K++ P+ + +EP SPVLSGG+ GPH IQGI
Sbjct: 168 RDTDGKVDIFVSGVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQKGPHPIQGI 227
Query: 182 GAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPEN 241
GAGFVP VL++ ++DEV+ V +D+A+E A+ +A +EGL RPEN
Sbjct: 228 GAGFVPPVLDLALVDEVITVGNDDALELARRMATEEGLLFGISSGAAVWAARELAHRPEN 287
Query: 242 AGKLIVVIFPSFGERYLSSVLF 263
AGKLIVV+ P FGERYLS+VLF
Sbjct: 288 AGKLIVVVLPDFGERYLSTVLF 309
>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani In Complex With Designed
Tetrapeptide
pdb|3TBH|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase In
Complex With Octapeptide Derived From Serine Acetyl
Transferase Of Leishmania Donovani
pdb|3SPX|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From
Leishmania Donovani
Length = 334
Score = 265 bits (677), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 178/271 (65%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R+G+++ AE +G + PG+S+++E +SGNTG+ LA + A + Y++IITMP SMSLERR
Sbjct: 53 RLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRC 112
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+LR FGAE++LT A GMKGAV A++I+A PNA + QF N IH ETTGPE+W+
Sbjct: 113 LLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWE 172
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
+ +D ++ + LK+ + ++ +EPTESPVLSGGKPGPHKIQGIG
Sbjct: 173 QTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPHKIQGIG 232
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
GFVP VL+ ++IDEV+ V+ D+AIETA L +G+F +RPE
Sbjct: 233 PGFVPDVLDRSLIDEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERPEME 292
Query: 243 GKLIVVIFPSFGERYLSSVLFESVRKEAESM 273
GK IV + PSFGERYLS+ L+ SVR E S+
Sbjct: 293 GKTIVTVIPSFGERYLSTTLYRSVRDEVSSL 323
>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase
pdb|4AIR|B Chain B, Leishmania Major Cysteine Synthase
Length = 354
Score = 258 bits (660), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 174/271 (64%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R+G+++ AE +G + PG+SV++E +SGNTG+ LA + A + Y++IITMP SMSLERR
Sbjct: 74 RLGFAIYDKAEKEGKLIPGKSVVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRC 133
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+LR FGAE++LT A GMKGAV A++I+ PNA + QF N IH ETTGPE+W+
Sbjct: 134 LLRIFGAEVILTPAALGMKGAVTMAKKIVTANPNAVLADQFATKYNALIHEETTGPEIWE 193
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
+ +D ++ + LK+ + ++ +EP ESPVLSGGKPG HKIQGIG
Sbjct: 194 QTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPMESPVLSGGKPGAHKIQGIG 253
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
GFVP VL+ ++IDEV V+ D+AIETA L +G+F +RPE
Sbjct: 254 PGFVPDVLDRSLIDEVFCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERPEME 313
Query: 243 GKLIVVIFPSFGERYLSSVLFESVRKEAESM 273
GK IV I PSFGERYLS+ L+ SVR E S+
Sbjct: 314 GKTIVTIIPSFGERYLSTALYRSVRDEVSSL 344
>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1OAS|B Chain B, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium
pdb|1FCJ|A Chain A, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|B Chain B, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|C Chain C, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
pdb|1FCJ|D Chain D, Crystal Structure Of Oass Complexed With Chloride And
Sulfate
Length = 322
Score = 257 bits (657), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 183/279 (65%), Gaps = 10/279 (3%)
Query: 2 CRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR 61
CRIG +MI DAE +G++ PG L+EPT+GNTGI LA++AAA+ Y+L +TMP +MS+ERR
Sbjct: 42 CRIGANMIWDAEKRGVLKPGVE-LVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERR 100
Query: 62 IILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPEL 120
+L+A GA LVLT+ AKGMKGA+QKAEEI+A P Y +LQQF NPANP+IH +TTGPE+
Sbjct: 101 KLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEI 160
Query: 121 WKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKL--YGIEPTESPVLSGG------K 172
W+ + G++D +S +++K L +EPT+SPV++ K
Sbjct: 161 WEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIK 220
Query: 173 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 232
PGPHKIQGIGAGF+PG L++ +ID+VV ++++EAI TA+ L +EG+
Sbjct: 221 PGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAA 280
Query: 233 XXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAE 271
+ K IVVI PS GERYLS+ LF + E E
Sbjct: 281 LKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 319
>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
pdb|1D6S|B Chain B, Crystal Structure Of The K41a Mutant Of O-Acetylserine
Sulfhydrylase Complexed In External Aldimine Linkage
With Methionine
Length = 322
Score = 257 bits (657), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 183/279 (65%), Gaps = 10/279 (3%)
Query: 2 CRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR 61
CRIG +MI DAE +G++ PG L+EPT+GNTGI LA++AAA+ Y+L +TMP +MS+ERR
Sbjct: 42 CRIGANMIWDAEKRGVLKPGVE-LVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERR 100
Query: 62 IILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPEL 120
+L+A GA LVLT+ AKGMKGA+QKAEEI+A P Y +LQQF NPANP+IH +TTGPE+
Sbjct: 101 KLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEI 160
Query: 121 WKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKL--YGIEPTESPVLSGG------K 172
W+ + G++D +S +++K L +EPT+SPV++ K
Sbjct: 161 WEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIK 220
Query: 173 PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXX 232
PGPHKIQGIGAGF+PG L++ +ID+VV ++++EAI TA+ L +EG+
Sbjct: 221 PGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAA 280
Query: 233 XXXXKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAE 271
+ K IVVI PS GERYLS+ LF + E E
Sbjct: 281 LKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 319
>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex
pdb|3IQG|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnwni
pdb|3IQH|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mnydi
pdb|3IQI|X Chain X, Structure Of O-Acetylserine Sulfhydrylase In Complex With
Peptide Mneni
Length = 316
Score = 236 bits (603), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 176/273 (64%), Gaps = 9/273 (3%)
Query: 2 CRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR 61
CRIG +M+ AE G +T G+ + ++ TSGNTGI LA++AAA+ Y++ +TMP +MSLER+
Sbjct: 43 CRIGANMVWQAEKDGTLTKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERK 101
Query: 62 IILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPEL 120
+L G LVLT+ AKGMKGA+ KAEEI+A P+ Y ML+QFENPANP+IH ETTGPE+
Sbjct: 102 RLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEI 161
Query: 121 WKGSGGRIDALVSXXXXXXXXXXXXKFLK-EKNPNIKLYGIEPTESPVLSGG------KP 173
WK + G++D +V+ + +K + I +EP ESPV+S KP
Sbjct: 162 WKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKP 221
Query: 174 GPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXX 233
GPHKIQGIGAGF+P L+++IID V V SD A+ TA+ L +EG+
Sbjct: 222 GPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAAD 281
Query: 234 XXXKRPENAGKLIVVIFPSFGERYLSSVLFESV 266
K PE A KLIVVI PS ERYLS+ LFE +
Sbjct: 282 RLAKLPEFADKLIVVILPSASERYLSTALFEGI 314
>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From
Geobacillus Kaustophilus Hta426
Length = 308
Score = 228 bits (580), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 173/262 (66%), Gaps = 3/262 (1%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RI +MI AE G + PG+++ +EPTSGNTGIGLA +AAAK Y+ ++ MP +MSLERR
Sbjct: 47 RIALAMIEAAEKAGKLKPGDTI-VEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRN 105
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+LRA+GAELVLT A+GM+GA+ KAEE L + +M QQF+N ANP+IH TTG E+ +
Sbjct: 106 LLRAYGAELVLTPGAQGMRGAIAKAEE-LVREHGYFMPQQFKNEANPEIHRLTTGKEIVE 164
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
G ++DA V+ K L+E PNIK+Y +EP +SPVLSGGKPGPHKIQGIG
Sbjct: 165 QMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGKPGPHKIQGIG 224
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
AGFVP +L+ +I D V+ V+++EA A+ A +EG+ K
Sbjct: 225 AGFVPDILDTSIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIHAALKVAKE-LGK 283
Query: 243 GKLIVVIFPSFGERYLSSVLFE 264
GK ++ I PS GERYLS+ L++
Sbjct: 284 GKKVLAIIPSNGERYLSTPLYQ 305
>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase
pdb|2ECO|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Methylvalerate
pdb|2ECQ|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 3-Hydroxylactate
pdb|2EFY|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
pdb|2EFY|B Chain B, Crystal Structure Of T.Th. Hb8 O-Acetylserine
Sulfhydrylase Complexed With 4-Acetylbutyric Acid
Length = 304
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/262 (45%), Positives = 166/262 (63%), Gaps = 3/262 (1%)
Query: 3 RIGYSMISDAEAKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR 61
R + MI DAE +G++ PG V++EPTSGNTGIGLA +AA++ YRLI+TMPA MS ER+
Sbjct: 42 RPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERK 101
Query: 62 IILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELW 121
+L+AFGAELVLTDP + M A ++A L + A+M QF+NPAN + HYETTGPEL+
Sbjct: 102 RVLKAFGAELVLTDPERRMLAAREEALR-LKEELGAFMPDQFKNPANVRAHYETTGPELY 160
Query: 122 KGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGI 181
+ GRIDA V ++LKE+ P++K+ +EP S VLSGGK G H QG+
Sbjct: 161 EALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGM 220
Query: 182 GAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPEN 241
G GF+P L+++++D V+QV ++A A+ LA +EGLF+ R
Sbjct: 221 GPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVA-RELG 279
Query: 242 AGKLIVVIFPSFGERYLSSVLF 263
GK + I P G +YLS+ L+
Sbjct: 280 PGKRVACISPDGGWKYLSTPLY 301
>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O58|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665)
From Thermotoga Maritima At 1.80 A Resolution
Length = 303
Score = 200 bits (508), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 155/253 (61%), Gaps = 6/253 (2%)
Query: 8 MISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAF 67
MI DAE +GL+ G ++EPTSGN GI +A + A + +R+I+TMP +MS+ERR +L+
Sbjct: 54 MILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKML 110
Query: 68 GAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGR 127
GAELVLT GMKGAV+KA EI +T A+ML QFENP N H TTGPE+ K +
Sbjct: 111 GAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQ 169
Query: 128 IDALVSXXXXXXXXXXXXKFLKEKNPN-IKLYGIEPTESPVLSGGKPGPHKIQGIGAGFV 186
IDA V+ + LK N +K+ +EP +SPVLSGG+PG H IQGIGAGFV
Sbjct: 170 IDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFV 229
Query: 187 PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENAGKLI 246
P +L+ ++IDEV+ V +EA E A+ LA KEGL V ++ + +
Sbjct: 230 PKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALKVAQKLGPDAR-V 288
Query: 247 VVIFPSFGERYLS 259
V + P ERYLS
Sbjct: 289 VTVAPDHAERYLS 301
>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
pdb|3FCA|B Chain B, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid
Into Proteins As Biophysical Probe
Length = 291
Score = 200 bits (508), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 155/253 (61%), Gaps = 6/253 (2%)
Query: 8 MISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAF 67
MI DAE +GL+ G ++EPTSGN GI +A + A + +R+I+TMP +MS+ERR +L+
Sbjct: 42 MILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKML 98
Query: 68 GAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGR 127
GAELVLT GMKGAV+KA EI +T A+ML QFENP N H TTGPE+ K +
Sbjct: 99 GAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQ 157
Query: 128 IDALVSXXXXXXXXXXXXKFLKEKNPN-IKLYGIEPTESPVLSGGKPGPHKIQGIGAGFV 186
IDA V+ + LK N +K+ +EP +SPVLSGG+PG H IQGIGAGFV
Sbjct: 158 IDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFV 217
Query: 187 PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENAGKLI 246
P +L+ ++IDEV+ V +EA E A+ LA KEGL V ++ + +
Sbjct: 218 PKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALKVAQKLGPDAR-V 276
Query: 247 VVIFPSFGERYLS 259
V + P ERYLS
Sbjct: 277 VTVAPDHAERYLS 289
>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
pdb|3BM5|B Chain B, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From
Entamoeba Histolytica In Complex With Cysteine
Length = 338
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 156/263 (59%), Gaps = 3/263 (1%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R+G++++ A G + PG + IE TSGNTGI L A YR+ I MP++MS+ER++
Sbjct: 59 RVGFNIVYQAIKDGRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQM 117
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELW 121
I++AFGAEL+LT+ KGM GA+++ +++ + P Y + QF NP N H+ T E+W
Sbjct: 118 IMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIW 176
Query: 122 KGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGI 181
+ + G +D +VS + LKEK IK+ +EP ES VL G GPH IQGI
Sbjct: 177 EDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGI 236
Query: 182 GAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPEN 241
GAGF+P + + +DE++ + + +A + A+ + +G+ ++PEN
Sbjct: 237 GAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKEAEKPEN 296
Query: 242 AGKLIVVIFPSFGERYLSSVLFE 264
GK IV+I PS GERYLS+ L++
Sbjct: 297 EGKTIVIIVPSCGERYLSTDLYK 319
>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
pdb|2PQM|B Chain B, Crystal Structure Of Cysteine Synthase (Oass) From
Entamoeba Histolytica At 1.86 A Resolution
Length = 343
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 156/263 (59%), Gaps = 3/263 (1%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R+G++++ A G + PG + IE TSGNTGI L A YR+ I MP++MS+ER++
Sbjct: 60 RVGFNIVYQAIKDGRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQM 118
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELW 121
I++AFGAEL+LT+ KGM GA+++ +++ + P Y + QF NP N H+ T E+W
Sbjct: 119 IMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIW 177
Query: 122 KGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGI 181
+ + G +D +VS + LKEK IK+ +EP ES VL G GPH IQGI
Sbjct: 178 EDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGI 237
Query: 182 GAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPEN 241
GAGF+P + + +DE++ + + +A + A+ + +G+ ++PEN
Sbjct: 238 GAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKEAEKPEN 297
Query: 242 AGKLIVVIFPSFGERYLSSVLFE 264
GK IV+I PS GERYLS+ L++
Sbjct: 298 EGKTIVIIVPSCGERYLSTDLYK 320
>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|C Chain C, Crystal Structure Of O-Acetylserine Sulfhydrylase B
pdb|2BHT|D Chain D, Crystal Structure Of O-Acetylserine Sulfhydrylase B
Length = 303
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 147/261 (56%), Gaps = 11/261 (4%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R SMI +AE +G I PG+ VLIE TSGNTGI LA +AA K YR+ + MP +MS ERR
Sbjct: 43 RAALSMIVEAEKRGRIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRA 101
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+RA+GAEL+L +GM+GA A E +A +L QF NP NPK HY TTGPE+W+
Sbjct: 102 AMRAYGAELILVTKEQGMEGARDLALE-MANRGEGKLLDQFNNPDNPKAHYTTTGPEIWQ 160
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
+GGRI VS +F++E++ + + G++P E + G + P +
Sbjct: 161 QTGGRITHFVSSMGTTGTITGVSEFMREQSKPVTIVGLQPEEGSSIPGIRRWPTE----- 215
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
++PG+ +++DEV+ + +A T + LA++EG+F K N
Sbjct: 216 --YLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAK--ANP 271
Query: 243 GKLIVVIFPSFGERYLSSVLF 263
++V I G+RYLS+ +F
Sbjct: 272 DAVVVAIICDRGDRYLSTGVF 292
>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|B Chain B, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|C Chain C, Crystal Structure Of Cysteine Synthase B
pdb|2BHS|D Chain D, Crystal Structure Of Cysteine Synthase B
Length = 303
Score = 176 bits (447), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 146/261 (55%), Gaps = 11/261 (4%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R SMI +AE +G I PG+ VLIE TSGNTGI LA +AA K YR+ + MP +MS ERR
Sbjct: 43 RAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRA 101
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+RA+GAEL+L +GM+GA A E +A +L QF NP NP HY TTGPE+W+
Sbjct: 102 AMRAYGAELILVTKEQGMEGARDLALE-MANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ 160
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
+GGRI VS +F++E++ + + G++P E + G + P +
Sbjct: 161 QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPTE----- 215
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
++PG+ +++DEV+ + +A T + LA++EG+F K N
Sbjct: 216 --YLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAK--ANP 271
Query: 243 GKLIVVIFPSFGERYLSSVLF 263
++V I G+RYLS+ +F
Sbjct: 272 DAVVVAIICDRGDRYLSTGVF 292
>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O-
Acetylserine Sulfhydrylase
Length = 303
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R SMI +AE +G I PG+ VLIE TSGNTGI LA +AA K YR+ + MP +MS ERR
Sbjct: 43 RAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRA 101
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+RA+GAEL+L +GM+GA A E +A +L QF NP NP HY TTGPE+W+
Sbjct: 102 AMRAYGAELILVTKEQGMEGARDLALE-MANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ 160
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
+GGRI VS +F++E++ + + G++P E + G + P +
Sbjct: 161 QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPTE----- 215
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
++PG+ +++DEV+ + +A T + LA++EG+F N
Sbjct: 216 --YLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAA--ANP 271
Query: 243 GKLIVVIFPSFGERYLSSVLF 263
++V I G+RYLS+ +F
Sbjct: 272 DAVVVAIICDRGDRYLSTGVF 292
>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|B Chain B, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|C Chain C, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|D Chain D, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|E Chain E, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|F Chain F, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|G Chain G, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
pdb|2JC3|H Chain H, Structure Of O-acetylserine Sulfhydrylase B From
Salmonella Typhimurium
Length = 303
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R SMI +AE +G I PG+ VLIE TSGNTGI LA +AA K YR+ + MP +MS ERR
Sbjct: 43 RAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRA 101
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+RA+GAEL+L +GM+GA A +++ +L QF NP NP HY TTGPE+W+
Sbjct: 102 AMRAYGAELILVTKEQGMEGARDLA-LAMSERGEGKLLDQFNNPDNPYAHYTTTGPEIWR 160
Query: 123 GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIG 182
+ GRI VS +FL+E+ + + G++P E + G + P
Sbjct: 161 QTSGRITHFVSSMGTTGTITGVSRFLREQEKPVTIVGLQPEEGSSIPGIRRWP------- 213
Query: 183 AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENA 242
A ++PG+ +++DEV+ + ++A T + LA++EG+F +
Sbjct: 214 AEYMPGIFNASLVDEVLDIHQNDAENTMRELAVREGIFCGVSSGGAVAGALRVAR--ATP 271
Query: 243 GKLIVVIFPSFGERYLSSVLF 263
G ++V I G+RYLS+ +F
Sbjct: 272 GAIVVAIICDRGDRYLSTGVF 292
>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|B Chain B, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|C Chain C, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|D Chain D, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|E Chain E, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
pdb|1M54|F Chain F, Cystathionine-Beta Synthase: Reduced Vicinal Thiols
Length = 363
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 142/271 (52%), Gaps = 12/271 (4%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RI MI DAE G + PG+++ IEPTSGNTGIGLA AA + YR II MP MS E+
Sbjct: 78 RISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVD 136
Query: 63 ILRAFGAELVLTDPAKGM----KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 118
+LRA GAE+V T P + V A + + PN+++L Q+ N +NP HY+TT
Sbjct: 137 VLRALGAEIVRT-PTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTAD 195
Query: 119 ELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP-----TESPVLSGGKP 173
E+ + G++D LV+ + LKEK P ++ G++P E L+ +
Sbjct: 196 EILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQ 255
Query: 174 GPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXX 233
++++GIG F+P VL+ ++D+ + + +EA A++L +EGL
Sbjct: 256 TTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAV 315
Query: 234 XXXKRPENAGKLIVVIFPSFGERYLSSVLFE 264
+ + G+ VVI P Y++ L +
Sbjct: 316 KAAQELQE-GQRCVVILPDSVRNYMTKFLSD 345
>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|B Chain B, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|C Chain C, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|D Chain D, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|E Chain E, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
pdb|1JBQ|F Chain F, Structure Of Human Cystathionine Beta-Synthase: A Unique
Pyridoxal 5'- Phosphate Dependent Hemeprotein
Length = 435
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 142/271 (52%), Gaps = 12/271 (4%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RI MI DAE G + PG+++ IEPTSGNTGIGLA AA + YR II MP MS E+
Sbjct: 143 RISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVD 201
Query: 63 ILRAFGAELVLTDPAKGM----KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 118
+LRA GAE+V T P + V A + + PN+++L Q+ N +NP HY+TT
Sbjct: 202 VLRALGAEIVRT-PTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTAD 260
Query: 119 ELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP-----TESPVLSGGKP 173
E+ + G++D LV+ + LKEK P ++ G++P E L+ +
Sbjct: 261 EILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQ 320
Query: 174 GPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXX 233
++++GIG F+P VL+ ++D+ + + +EA A++L +EGL
Sbjct: 321 TTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAV 380
Query: 234 XXXKRPENAGKLIVVIFPSFGERYLSSVLFE 264
+ + G+ VVI P Y++ L +
Sbjct: 381 KAAQELQE-GQRCVVILPDSVRNYMTKFLSD 410
>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
pdb|3DWG|B Chain B, Crystal Structure Of A Sulfur Carrier Protein Complex
Found In The Cysteine Biosynthetic Pathway Of
Mycobacterium Tuberculosis
Length = 325
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 110/213 (51%), Gaps = 9/213 (4%)
Query: 8 MISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAF 67
MI AEA GL+ PG ++L EPTSGNTGI LA A K YRLI MP + S+ERR +L +
Sbjct: 60 MIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELY 118
Query: 68 GAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGR 127
GA+++ + G AV A+E+ A P+ ML Q+ NPAN HY TGPEL
Sbjct: 119 GAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL-LADLPE 177
Query: 128 IDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVP 187
I V+ +FL+E N+K+ EP G + ++ + GFVP
Sbjct: 178 ITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYG-------EGVYALRNMDEGFVP 230
Query: 188 GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 220
+ + I+ V + +A+ + L EG+F
Sbjct: 231 ELYDPEILTARYSVGAVDAVRRTRELVHTEGIF 263
>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3DKI|B Chain B, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium
Tuberculosis An O-Phosphoserine Dependent Cysteine
Synthase
pdb|3FGP|A Chain A, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
pdb|3FGP|B Chain B, 2.05 A Crystal Structure Of Cysm From Mycobacterium
Tuberculosis - Open And Closed Conformations
Length = 326
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 110/213 (51%), Gaps = 9/213 (4%)
Query: 8 MISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAF 67
MI AEA GL+ PG ++L EPTSGNTGI LA A K YRLI MP + S+ERR +L +
Sbjct: 61 MIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELY 119
Query: 68 GAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGR 127
GA+++ + G AV A+E+ A P+ ML Q+ NPAN HY TGPEL
Sbjct: 120 GAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL-LADLPE 178
Query: 128 IDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVP 187
I V+ +FL+E N+K+ EP G + ++ + GFVP
Sbjct: 179 ITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYG-------EGVYALRNMDEGFVP 231
Query: 188 GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 220
+ + I+ V + +A+ + L EG+F
Sbjct: 232 ELYDPEILTARYSVGAVDAVRRTRELVHTEGIF 264
>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila
pdb|3PC3|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Aminoacrylate
pdb|3PC4|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From
Drosophila In Complex With Serine
Length = 527
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 138/272 (50%), Gaps = 12/272 (4%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
RIGY M+ DAE +GL+ PG ++ IEPTSGNTGIGLA A K Y+ II MP MS E+
Sbjct: 95 RIGYRMVQDAEEQGLLKPGYTI-IEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVS 153
Query: 63 ILRAFGAELVLTDPAKGM----KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGP 118
LR GA+++ T P + +G + A+++ +TPN+ +L Q+ N NP HY+ T
Sbjct: 154 ALRTLGAKIIRT-PTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAA 212
Query: 119 ELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPV-----LSGGKP 173
E+ ++D +V + +KE+ P+ ++ G++P S + L+
Sbjct: 213 EILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTDV 272
Query: 174 GPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXX 233
++++GIG F P V + ++D ++ + ++ L +EGL
Sbjct: 273 QFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAAL 332
Query: 234 XXXKRPENAGKLIVVIFPSFGERYLSSVLFES 265
++ + G+ VVI P Y++ + ++
Sbjct: 333 EHARKLKK-GQRCVVILPDGIRNYMTKFVSDN 363
>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
pdb|3DWI|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The
Cysteine Synthase B
Length = 323
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 109/213 (51%), Gaps = 9/213 (4%)
Query: 8 MISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAF 67
MI AEA GL+ PG ++L EPTSGNTGI LA A K YRLI MP + S+ERR +L +
Sbjct: 58 MIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELY 116
Query: 68 GAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGR 127
GA+++ + G AV A+E+ A P+ ML Q+ NPAN HY TGPEL
Sbjct: 117 GAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL-LADLPE 175
Query: 128 IDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVP 187
I V+ +FL+E N+ + EP G + ++ + GFVP
Sbjct: 176 ITHFVAGLGTTGTLMGTGRFLREHVANVAIVAAEPRYG-------EGVYALRNMDEGFVP 228
Query: 188 GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 220
+ + I+ V + +A+ + L EG+F
Sbjct: 229 ELYDPEILTARYSVGAVDAVRRTRELVHTEGIF 261
>pdb|1WKV|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|1WKV|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase
pdb|3VSA|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
pdb|3VSA|B Chain B, Crystal Structure Of O-Phosphoserine Sulfhydrylase Without
Acetate
Length = 389
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 103/247 (41%), Gaps = 22/247 (8%)
Query: 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKG 82
S++ + TS N G+ L+ +A YR + +P + +++ R GA+ V+ DP
Sbjct: 146 SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQ-VIVDPEA--PS 202
Query: 83 AVQKAEEILAKTPNA--YMLQQFENPANPKIHYETTGPELW---KGSGGRIDALVSXXXX 137
V ++ + N + QF N AN + H T E++ + G + +
Sbjct: 203 TVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGT 262
Query: 138 XXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIID- 196
+L+ +P+I+ ++P + + PG +++ G+L +N++D
Sbjct: 263 SGHMSAAAFYLQSVDPSIRAVLVQPAQGDSI----PGIRRVE-------TGMLWINMLDI 311
Query: 197 --EVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENAGKLIVVIFPSFG 254
+ +V+ +EA+E +A +GL + + VV+ P G
Sbjct: 312 SYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTG 371
Query: 255 ERYLSSV 261
+YLS V
Sbjct: 372 FKYLSLV 378
>pdb|3VSC|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSC|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Phospho-L-Serine
pdb|3VSD|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
pdb|3VSD|B Chain B, Crystal Structure Of The K127a Mutant Of O-Phosphoserine
Sulfhydrylase Complexed With External Schiff Base Of
Pyridoxal 5'-Phosphate With O- Acetyl-L-Serine
Length = 389
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 22/247 (8%)
Query: 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKG 82
S++ + TS N G+ L+ +A YR + +P + +++ R GA+ V+ DP
Sbjct: 146 SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQ-VIVDPEA--PS 202
Query: 83 AVQKAEEILAKTPNA--YMLQQFENPANPKIHYETTGPELWKGS---GGRIDALVSXXXX 137
V ++ + N + QF N AN + H T E++ S G + +
Sbjct: 203 TVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGT 262
Query: 138 XXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIID- 196
+L+ +P+I+ ++P + + PG +++ G+L +N++D
Sbjct: 263 SGHMSAAAFYLQSVDPSIRAVLVQPAQGDSI----PGIRRVE-------TGMLWINMLDI 311
Query: 197 --EVVQVSSDEAIETAKLLALKEGLFVXXXXXXXXXXXXXXXKRPENAGKLIVVIFPSFG 254
+ +V+ +EA+E +A +GL + + VV+ P G
Sbjct: 312 SYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTG 371
Query: 255 ERYLSSV 261
+YLS V
Sbjct: 372 FKYLSLV 378
>pdb|4D9I|A Chain A, Crystal Structure Of Holo Diaminopropionate Ammonia Lyase
From Escherichia Coli
pdb|4D9I|B Chain B, Crystal Structure Of Holo Diaminopropionate Ammonia Lyase
From Escherichia Coli
pdb|4D9N|A Chain A, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With D-Serine
pdb|4D9N|B Chain B, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With D-Serine
Length = 398
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 29 TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG------MKG 82
T GN G G+A+ A +I MP + ER + GAE ++TD M+
Sbjct: 119 TDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQH 178
Query: 83 AVQKAEEILAKT 94
A Q E++ T
Sbjct: 179 AQQHGWEVVQDT 190
>pdb|4D9K|A Chain A, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
pdb|4D9K|D Chain D, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
pdb|4D9K|B Chain B, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
pdb|4D9K|C Chain C, Crystal Structure Of Escherichia Coli Diaminopropionate
Ammonia Lyase In Apo Form
Length = 398
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 29 TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG------MKG 82
T GN G G+A+ A +I MP + ER + GAE ++TD M+
Sbjct: 119 TDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQH 178
Query: 83 AVQKAEEILAKT 94
A Q E++ T
Sbjct: 179 AQQHGWEVVQDT 190
>pdb|4D9M|A Chain A, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With Aminoacrylate-Plp
Azomethine Reaction Intermediate
pdb|4D9M|B Chain B, Crystal Structure Of Diaminopropionate Ammonia Lyase From
Escherichia Coli In Complex With Aminoacrylate-Plp
Azomethine Reaction Intermediate
Length = 398
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 29 TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG------MKG 82
T GN G G+A+ A +I MP + ER + GAE ++TD M+
Sbjct: 119 TDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQH 178
Query: 83 AVQKAEEILAKT 94
A Q E++ T
Sbjct: 179 AQQHGWEVVQDT 190
>pdb|1VE5|A Chain A, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
pdb|1VE5|B Chain B, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
pdb|1VE5|C Chain C, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
pdb|1VE5|D Chain D, Crystal Structure Of T.Th. Hb8 Threonine Deaminase
Length = 311
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 25 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72
L+ +SGN G+A+ A + ++ MP S ++ RA+GAE+V
Sbjct: 68 LLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVV 115
>pdb|3HMK|A Chain A, Crystal Structure Of Serine Racemase
pdb|3HMK|B Chain B, Crystal Structure Of Serine Racemase
pdb|3L6C|A Chain A, X-Ray Crystal Structure Of Rat Serine Racemase In Complex
Wi Malonate A Potent Inhibitor
pdb|3L6C|B Chain B, X-Ray Crystal Structure Of Rat Serine Racemase In Complex
Wi Malonate A Potent Inhibitor
Length = 339
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 17/209 (8%)
Query: 25 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAV 84
++ +SGN G L + A + I +P + +++ ++A+GA +V ++P+ + V
Sbjct: 79 VVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENV 138
Query: 85 QKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXX 144
A+ I+ +T ++ + PA I + T +DALV
Sbjct: 139 --AQRIIQET-EGILVHPNQEPA--VIAGQGTIALEVLNQVPLVDALVVPVGGGGMVAGI 193
Query: 145 XKFLKEKNPNIKLYGIEPTESPVLSGGK------PGPHKIQGIGAGFVPGV------LEV 192
+K P++K+Y EP+ + K P H + I G + +
Sbjct: 194 AITIKTLKPSVKVYAAEPSNADDCYQSKLKGELTPNLHPPETIADGVKSSIGLNTWPIIR 253
Query: 193 NIIDEVVQVSSDEAIETAKLLALKEGLFV 221
+++D+V V+ DE +L+ + L +
Sbjct: 254 DLVDDVFTVTEDEIKYATQLVWERMKLLI 282
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 6 YSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR 65
YS++ +G + PGESVLI SG G +A ++ R+ T+ S E+R L+
Sbjct: 1657 YSLV----VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVG---SAEKRAYLQ 1709
Query: 66 A 66
A
Sbjct: 1710 A 1710
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 16 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75
G ++PGE VLI +G G+G+A ++ AK I A +R ++ R G E V
Sbjct: 34 GRLSPGERVLIHSATG--GVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LGVEYV--- 87
Query: 76 PAKGMKGAVQKAEEILAKT 94
G +V A+EIL T
Sbjct: 88 ---GDSRSVDFADEILELT 103
>pdb|4D9G|A Chain A, Crystal Structure Of Selenomethionine Incorporated Holo
Diaminopropionate Ammonia Lyase From Escherichia Coli
pdb|4D9G|B Chain B, Crystal Structure Of Selenomethionine Incorporated Holo
Diaminopropionate Ammonia Lyase From Escherichia Coli
Length = 398
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 29 TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75
T GN G G+A+ A +I P + ER + GAE ++TD
Sbjct: 119 TDGNHGRGVAWAAQQLGQNAVIYXPKGSAQERVDAILNLGAECIVTD 165
>pdb|3L6R|A Chain A, The Structure Of Mammalian Serine Racemase: Evidence For
Conformational Changes Upon Inhibitor Binding
Length = 346
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 25 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAV 84
++ +SGN G L + A + I +P + +++ ++A+GA +V +P+ + V
Sbjct: 79 VVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDESRENV 138
Query: 85 QK 86
K
Sbjct: 139 AK 140
>pdb|1TDJ|A Chain A, Threonine Deaminase (Biosynthetic) From E. Coli
Length = 514
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 3 RIGYSMIS----DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL 58
R Y+M++ + +A G+IT ++GN G+AF +A + +I MP + +
Sbjct: 64 RGAYAMMAGLTEEQKAHGVITA--------SAGNHAQGVAFSSARLGVKALIVMPTATAD 115
Query: 59 ERRIILRAFGAELVL 73
+ +R FG E++L
Sbjct: 116 IKVDAVRGFGGEVLL 130
>pdb|3L6B|A Chain A, X-Ray Crystal Structure Of Human Serine Racemase In
Complex Malonate A Potent Inhibitor
Length = 346
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 25 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAV 84
++ +SGN G L + A + I +P + +++ ++A+GA +V +P+ + V
Sbjct: 79 VVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDESRENV 138
Query: 85 QK 86
K
Sbjct: 139 AK 140
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 17 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR 65
+ GESVL+ SG G+GLA A+ Y L I A ++I+L+
Sbjct: 167 CVKAGESVLVHGASG--GVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213
>pdb|3IAU|A Chain A, The Structure Of The Processed Form Of Threonine Deaminase
Isoform 2 From Solanum Lycopersicum
pdb|3IAU|B Chain B, The Structure Of The Processed Form Of Threonine Deaminase
Isoform 2 From Solanum Lycopersicum
Length = 366
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 33/172 (19%)
Query: 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI 62
R Y+M+S+ + L + +I ++GN G+A I MP + +
Sbjct: 93 RGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAGQRLNCVAKIVMPTTTPQIKID 148
Query: 63 ILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 122
+RA G ++VL K A A E+ K Y + F++P K T G E+ +
Sbjct: 149 AVRALGGDVVLY--GKTFDEAQTHALELSEKDGLKY-IPPFDDPGVIK-GQGTIGTEINR 204
Query: 123 ------------GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP 162
G GG I + + F K+ PN K+ G+EP
Sbjct: 205 QLKDIHAVFIPVGGGGLIAGVAT-------------FFKQIAPNTKIIGVEP 243
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.135 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,347,098
Number of Sequences: 62578
Number of extensions: 268496
Number of successful extensions: 693
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 580
Number of HSP's gapped (non-prelim): 50
length of query: 277
length of database: 14,973,337
effective HSP length: 98
effective length of query: 179
effective length of database: 8,840,693
effective search space: 1582484047
effective search space used: 1582484047
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)