Query 023801
Match_columns 277
No_of_seqs 190 out of 1215
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 13:01:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023801.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023801hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aec_A Cysteine synthase, mito 100.0 8.3E-61 2.8E-65 434.4 28.4 276 1-276 154-429 (430)
2 3vc3_A Beta-cyanoalnine syntha 100.0 2.3E-60 7.8E-65 423.7 29.4 274 1-274 66-339 (344)
3 3tbh_A O-acetyl serine sulfhyd 100.0 5.4E-60 1.8E-64 420.1 29.2 275 1-275 51-325 (334)
4 1z7w_A Cysteine synthase; tran 100.0 1.8E-58 6.3E-63 408.9 30.1 275 1-275 46-320 (322)
5 2q3b_A Cysteine synthase A; py 100.0 3.1E-57 1.1E-61 399.5 29.2 266 1-267 47-312 (313)
6 1y7l_A O-acetylserine sulfhydr 100.0 4.5E-57 1.5E-61 399.1 25.1 266 1-267 42-315 (316)
7 2v03_A Cysteine synthase B; py 100.0 2.9E-56 1E-60 391.5 28.6 259 1-270 41-299 (303)
8 3dwg_A Cysteine synthase B; su 100.0 1.3E-56 4.3E-61 397.1 23.9 257 1-266 53-311 (325)
9 2pqm_A Cysteine synthase; OASS 100.0 2.1E-56 7.1E-61 398.5 24.3 266 1-268 58-324 (343)
10 1ve1_A O-acetylserine sulfhydr 100.0 1.6E-55 5.5E-60 387.1 27.3 261 1-264 40-302 (304)
11 2egu_A Cysteine synthase; O-ac 100.0 5.6E-56 1.9E-60 390.7 23.6 261 1-264 45-305 (308)
12 1jbq_A B, cystathionine beta-s 100.0 4.3E-54 1.5E-58 392.3 31.9 270 1-272 141-418 (435)
13 1o58_A O-acetylserine sulfhydr 100.0 1.1E-54 3.8E-59 381.4 26.6 255 1-260 47-302 (303)
14 3pc3_A CG1753, isoform A; CBS, 100.0 5.4E-53 1.9E-57 396.5 31.0 269 1-271 93-369 (527)
15 3l6b_A Serine racemase; pyrido 100.0 2.3E-51 7.8E-56 366.2 21.9 253 1-260 56-321 (346)
16 4h27_A L-serine dehydratase/L- 100.0 1.9E-49 6.4E-54 356.0 27.2 259 1-270 77-356 (364)
17 1p5j_A L-serine dehydratase; l 100.0 4.6E-49 1.6E-53 354.3 28.2 260 1-270 77-356 (372)
18 2rkb_A Serine dehydratase-like 100.0 5.6E-49 1.9E-53 347.5 27.0 258 1-269 38-315 (318)
19 2gn0_A Threonine dehydratase c 100.0 1.3E-50 4.4E-55 361.1 16.0 255 1-267 71-337 (342)
20 3aey_A Threonine synthase; PLP 100.0 2.6E-49 8.8E-54 354.1 23.8 252 1-262 61-328 (351)
21 2zsj_A Threonine synthase; PLP 100.0 3.4E-49 1.2E-53 353.4 24.5 251 1-261 63-329 (352)
22 2d1f_A Threonine synthase; ami 100.0 2.8E-49 9.7E-54 354.7 23.1 252 1-261 69-336 (360)
23 3ss7_X D-serine dehydratase; t 100.0 8.7E-49 3E-53 359.5 22.2 263 1-268 118-439 (442)
24 1v71_A Serine racemase, hypoth 100.0 4.6E-49 1.6E-53 348.7 19.6 252 1-267 57-321 (323)
25 1tdj_A Biosynthetic threonine 100.0 8.2E-49 2.8E-53 362.3 21.9 249 1-259 62-322 (514)
26 3iau_A Threonine deaminase; py 100.0 4.7E-49 1.6E-53 353.9 19.6 258 1-270 91-360 (366)
27 1ve5_A Threonine deaminase; ri 100.0 4.6E-49 1.6E-53 347.1 19.0 244 1-259 51-310 (311)
28 1j0a_A 1-aminocyclopropane-1-c 100.0 1.4E-48 4.8E-53 345.9 19.0 249 1-258 54-314 (325)
29 4d9i_A Diaminopropionate ammon 100.0 3.9E-48 1.3E-52 351.6 22.1 262 1-269 77-391 (398)
30 1f2d_A 1-aminocyclopropane-1-c 100.0 5.4E-49 1.8E-53 350.8 15.8 252 1-259 51-330 (341)
31 1wkv_A Cysteine synthase; homo 100.0 1.6E-47 5.3E-52 345.0 24.4 253 1-269 127-384 (389)
32 4d9b_A D-cysteine desulfhydras 100.0 3.5E-48 1.2E-52 345.4 16.6 251 1-259 65-336 (342)
33 1tzj_A ACC deaminase, 1-aminoc 100.0 3.1E-47 1.1E-51 339.2 15.2 252 1-260 51-330 (338)
34 1e5x_A Threonine synthase; thr 100.0 1.5E-43 5.2E-48 327.9 21.2 251 1-261 163-442 (486)
35 1x1q_A Tryptophan synthase bet 100.0 2.1E-43 7.2E-48 322.1 20.2 255 1-260 109-409 (418)
36 1v8z_A Tryptophan synthase bet 100.0 1.4E-42 4.8E-47 314.6 22.6 253 1-260 82-380 (388)
37 1qop_B Tryptophan synthase bet 100.0 4.7E-43 1.6E-47 318.2 18.4 255 1-261 86-386 (396)
38 2o2e_A Tryptophan synthase bet 100.0 1.3E-41 4.5E-46 310.2 20.0 255 1-261 113-412 (422)
39 1vb3_A Threonine synthase; PLP 100.0 2.7E-39 9.4E-44 295.5 18.1 245 1-261 107-386 (428)
40 4f4f_A Threonine synthase; str 100.0 7.1E-35 2.4E-39 267.0 17.7 245 1-260 117-423 (468)
41 1kl7_A Threonine synthase; thr 100.0 1.7E-34 5.9E-39 267.5 18.9 252 1-260 124-458 (514)
42 3v7n_A Threonine synthase; ssg 100.0 7.8E-33 2.7E-37 253.6 15.6 245 1-260 130-442 (487)
43 3fwz_A Inner membrane protein 95.1 0.38 1.3E-05 35.8 11.5 97 23-161 8-105 (140)
44 3s2e_A Zinc-containing alcohol 93.6 0.77 2.6E-05 39.6 11.5 62 10-75 156-217 (340)
45 4b7c_A Probable oxidoreductase 93.5 0.65 2.2E-05 39.9 10.9 60 11-73 139-200 (336)
46 3jyn_A Quinone oxidoreductase; 93.4 0.63 2.2E-05 39.9 10.7 58 14-74 134-191 (325)
47 3uog_A Alcohol dehydrogenase; 93.4 0.67 2.3E-05 40.4 10.9 60 11-74 179-239 (363)
48 4dup_A Quinone oxidoreductase; 93.4 0.62 2.1E-05 40.5 10.6 61 11-74 157-218 (353)
49 3qwb_A Probable quinone oxidor 93.2 0.97 3.3E-05 38.8 11.5 59 14-75 142-200 (334)
50 3tqh_A Quinone oxidoreductase; 93.0 0.76 2.6E-05 39.3 10.4 62 10-75 142-203 (321)
51 4eye_A Probable oxidoreductase 92.8 0.62 2.1E-05 40.3 9.7 60 11-73 149-209 (342)
52 1vp8_A Hypothetical protein AF 92.6 0.86 3E-05 36.0 9.1 67 4-76 31-106 (201)
53 3gaz_A Alcohol dehydrogenase s 92.6 1.1 3.7E-05 38.8 11.0 57 11-71 140-197 (343)
54 3fpc_A NADP-dependent alcohol 92.4 0.91 3.1E-05 39.3 10.2 60 10-73 156-216 (352)
55 1kol_A Formaldehyde dehydrogen 92.3 1.4 4.8E-05 38.8 11.5 58 11-71 176-233 (398)
56 4ej6_A Putative zinc-binding d 92.2 1 3.4E-05 39.5 10.4 61 11-74 173-233 (370)
57 3gqv_A Enoyl reductase; medium 92.1 0.76 2.6E-05 40.2 9.5 52 19-74 163-214 (371)
58 4a2c_A Galactitol-1-phosphate 92.0 1.6 5.4E-05 37.5 11.3 63 11-76 151-213 (346)
59 3gms_A Putative NADPH:quinone 91.6 0.99 3.4E-05 38.9 9.5 60 12-74 136-195 (340)
60 2c0c_A Zinc binding alcohol de 91.4 1.8 6.2E-05 37.6 11.1 58 14-74 157-214 (362)
61 3iup_A Putative NADPH:quinone 91.3 1.2 4.2E-05 39.0 10.0 53 20-75 170-223 (379)
62 2j8z_A Quinone oxidoreductase; 91.2 2 7E-05 37.2 11.2 57 14-73 156-212 (354)
63 1v3u_A Leukotriene B4 12- hydr 91.1 2.6 9E-05 36.0 11.7 56 14-72 139-194 (333)
64 2eih_A Alcohol dehydrogenase; 90.9 2 6.8E-05 37.0 10.8 59 11-72 156-215 (343)
65 1jvb_A NAD(H)-dependent alcoho 90.7 2 6.9E-05 37.0 10.6 60 11-73 161-221 (347)
66 1yb5_A Quinone oxidoreductase; 90.6 2.8 9.7E-05 36.2 11.5 60 11-73 160-220 (351)
67 1pqw_A Polyketide synthase; ro 90.5 2.7 9.4E-05 32.8 10.5 55 14-71 32-86 (198)
68 3l9w_A Glutathione-regulated p 90.1 3.7 0.00013 36.6 12.0 51 23-76 5-55 (413)
69 3ip1_A Alcohol dehydrogenase, 90.0 3 0.0001 36.9 11.3 56 16-74 209-264 (404)
70 1qor_A Quinone oxidoreductase; 90.0 2.9 9.9E-05 35.6 11.0 59 11-72 130-189 (327)
71 3goh_A Alcohol dehydrogenase, 90.0 0.58 2E-05 39.9 6.5 59 10-73 132-190 (315)
72 3pi7_A NADH oxidoreductase; gr 90.0 1.6 5.5E-05 37.7 9.4 50 23-75 167-216 (349)
73 2hcy_A Alcohol dehydrogenase 1 90.0 3.6 0.00012 35.4 11.7 59 11-72 160-218 (347)
74 1gu7_A Enoyl-[acyl-carrier-pro 90.0 1.6 5.5E-05 37.9 9.4 63 11-73 156-221 (364)
75 1h2b_A Alcohol dehydrogenase; 90.0 3.3 0.00011 35.9 11.4 61 10-74 174-237 (359)
76 1f8f_A Benzyl alcohol dehydrog 89.9 2.3 8E-05 37.0 10.4 58 14-74 184-241 (371)
77 2zb4_A Prostaglandin reductase 89.7 3.9 0.00013 35.2 11.7 56 14-72 152-211 (357)
78 1vj0_A Alcohol dehydrogenase, 89.6 1.6 5.5E-05 38.3 9.2 59 11-73 185-245 (380)
79 3two_A Mannitol dehydrogenase; 89.6 1.3 4.6E-05 38.2 8.6 59 11-73 167-225 (348)
80 4a0s_A Octenoyl-COA reductase/ 89.6 1.3 4.5E-05 39.7 8.7 56 15-73 215-270 (447)
81 1wly_A CAAR, 2-haloacrylate re 89.6 3.1 0.00011 35.5 10.8 59 11-72 135-194 (333)
82 3krt_A Crotonyl COA reductase; 89.4 1.9 6.4E-05 38.9 9.6 57 16-75 224-280 (456)
83 1e3j_A NADP(H)-dependent ketos 89.4 2.9 9.8E-05 36.1 10.5 58 12-73 160-217 (352)
84 3fbg_A Putative arginate lyase 89.2 4 0.00014 35.1 11.3 57 14-73 138-200 (346)
85 2d8a_A PH0655, probable L-thre 89.2 3.4 0.00012 35.5 10.9 57 11-72 159-216 (348)
86 1zsy_A Mitochondrial 2-enoyl t 89.1 1.8 6E-05 37.6 9.0 60 14-73 161-221 (357)
87 1rjw_A ADH-HT, alcohol dehydro 88.8 3.5 0.00012 35.3 10.6 53 16-72 160-212 (339)
88 4eez_A Alcohol dehydrogenase 1 88.8 3 0.0001 35.8 10.2 61 11-75 154-215 (348)
89 2dph_A Formaldehyde dismutase; 88.5 3.5 0.00012 36.3 10.7 57 11-71 176-233 (398)
90 2j3h_A NADP-dependent oxidored 88.5 3.5 0.00012 35.4 10.4 56 14-72 149-205 (345)
91 2vn8_A Reticulon-4-interacting 88.4 3.1 0.0001 36.3 10.0 61 11-75 169-234 (375)
92 1xa0_A Putative NADPH dependen 87.6 1.5 5E-05 37.5 7.3 58 13-73 141-199 (328)
93 1pl8_A Human sorbitol dehydrog 87.0 2.6 8.8E-05 36.5 8.7 59 11-73 162-221 (356)
94 3uko_A Alcohol dehydrogenase c 86.9 3.2 0.00011 36.2 9.3 57 13-73 186-243 (378)
95 2b5w_A Glucose dehydrogenase; 86.8 2.2 7.7E-05 36.9 8.2 57 15-72 161-226 (357)
96 1piw_A Hypothetical zinc-type 86.3 2.3 8E-05 36.9 8.0 59 11-73 170-228 (360)
97 1tt7_A YHFP; alcohol dehydroge 86.2 1.7 5.7E-05 37.2 6.9 58 13-73 142-200 (330)
98 1iz0_A Quinone oxidoreductase; 86.1 2.3 7.8E-05 35.8 7.6 55 14-72 120-174 (302)
99 2cdc_A Glucose dehydrogenase g 86.1 3.4 0.00012 35.9 8.9 57 15-72 166-231 (366)
100 3jv7_A ADH-A; dehydrogenase, n 85.6 5 0.00017 34.4 9.7 54 17-74 168-222 (345)
101 4g81_D Putative hexonate dehyd 85.4 14 0.00048 30.4 12.0 73 21-94 9-84 (255)
102 1c1d_A L-phenylalanine dehydro 85.4 5.9 0.0002 34.6 10.0 47 3-50 155-203 (355)
103 3nx4_A Putative oxidoreductase 85.3 2.1 7.3E-05 36.4 7.1 58 14-74 139-197 (324)
104 4fn4_A Short chain dehydrogena 85.2 11 0.00036 31.1 11.1 74 21-94 7-82 (254)
105 3tpf_A Otcase, ornithine carba 85.2 5.1 0.00018 34.2 9.3 62 14-75 139-206 (307)
106 1p0f_A NADP-dependent alcohol 85.0 4.2 0.00015 35.3 9.1 57 13-72 184-240 (373)
107 3c85_A Putative glutathione-re 84.9 11 0.00038 28.7 12.7 95 24-160 41-138 (183)
108 1e3i_A Alcohol dehydrogenase, 84.8 5.1 0.00017 34.8 9.5 56 13-72 188-244 (376)
109 1t57_A Conserved protein MTH16 84.6 3.4 0.00012 32.7 7.2 66 4-76 39-113 (206)
110 1uuf_A YAHK, zinc-type alcohol 83.7 4.1 0.00014 35.5 8.4 59 11-73 185-243 (369)
111 2jhf_A Alcohol dehydrogenase E 83.1 4.8 0.00016 35.0 8.6 56 14-72 185-240 (374)
112 1cdo_A Alcohol dehydrogenase; 82.9 5.2 0.00018 34.7 8.7 55 14-72 186-241 (374)
113 3k4h_A Putative transcriptiona 82.0 19 0.00066 29.3 15.5 34 126-161 191-228 (292)
114 1ml4_A Aspartate transcarbamoy 80.8 7.7 0.00026 33.1 8.6 60 14-75 149-213 (308)
115 4fs3_A Enoyl-[acyl-carrier-pro 80.5 12 0.00041 30.6 9.7 73 21-94 6-84 (256)
116 1jx6_A LUXP protein; protein-l 80.5 24 0.00084 29.5 12.6 43 116-161 224-267 (342)
117 2fzw_A Alcohol dehydrogenase c 80.5 5.2 0.00018 34.7 7.8 55 14-72 184-239 (373)
118 2h6e_A ADH-4, D-arabinose 1-de 80.4 6.2 0.00021 33.8 8.2 51 17-72 168-220 (344)
119 4dvj_A Putative zinc-dependent 80.3 7.4 0.00025 33.7 8.7 57 14-73 160-222 (363)
120 3egc_A Putative ribose operon 80.1 23 0.00078 28.9 13.9 34 126-161 185-222 (291)
121 3llv_A Exopolyphosphatase-rela 80.0 7.7 0.00026 28.2 7.6 49 24-75 8-56 (141)
122 4gkb_A 3-oxoacyl-[acyl-carrier 79.9 11 0.00039 31.0 9.3 74 21-94 7-81 (258)
123 2i6u_A Otcase, ornithine carba 79.8 15 0.00052 31.2 10.2 60 14-75 142-209 (307)
124 3l6u_A ABC-type sugar transpor 79.8 23 0.00079 28.8 14.2 42 118-162 187-229 (293)
125 1vlv_A Otcase, ornithine carba 79.7 15 0.00051 31.5 10.2 60 14-75 161-228 (325)
126 4ekn_B Aspartate carbamoyltran 79.7 12 0.0004 31.9 9.4 60 14-75 145-210 (306)
127 3i1j_A Oxidoreductase, short c 79.4 19 0.00065 28.7 10.5 32 21-52 14-45 (247)
128 2cf5_A Atccad5, CAD, cinnamyl 79.0 6.5 0.00022 33.9 7.9 59 11-73 170-230 (357)
129 3huu_A Transcription regulator 79.0 26 0.00088 28.9 14.9 147 8-161 49-238 (305)
130 1pvv_A Otcase, ornithine carba 78.9 16 0.00056 31.1 10.1 60 14-75 149-215 (315)
131 3gv0_A Transcriptional regulat 78.5 26 0.00088 28.6 16.8 35 126-162 187-225 (288)
132 3o74_A Fructose transport syst 78.1 25 0.00085 28.2 15.9 42 118-162 171-216 (272)
133 3qk7_A Transcriptional regulat 78.0 27 0.00093 28.6 14.6 35 126-162 186-224 (294)
134 2q2v_A Beta-D-hydroxybutyrate 76.8 22 0.00074 28.7 10.2 53 22-75 5-57 (255)
135 1yqd_A Sinapyl alcohol dehydro 76.8 10 0.00034 32.9 8.5 59 11-73 177-237 (366)
136 4ibo_A Gluconate dehydrogenase 76.4 30 0.001 28.3 11.9 55 21-75 26-81 (271)
137 4ep1_A Otcase, ornithine carba 76.3 19 0.00064 31.1 9.8 61 14-75 173-239 (340)
138 2w37_A Ornithine carbamoyltran 76.2 16 0.00055 31.8 9.4 60 14-75 170-237 (359)
139 4fcc_A Glutamate dehydrogenase 76.0 18 0.00063 32.5 9.9 62 3-64 216-285 (450)
140 3gxh_A Putative phosphatase (D 76.0 22 0.00075 26.6 9.3 86 50-137 22-107 (157)
141 4a27_A Synaptic vesicle membra 75.9 9.3 0.00032 32.8 8.0 56 14-74 136-192 (349)
142 3csu_A Protein (aspartate carb 75.7 16 0.00056 31.1 9.2 60 14-75 148-213 (310)
143 4egf_A L-xylulose reductase; s 75.6 24 0.00082 28.7 10.2 32 22-53 21-52 (266)
144 1vl8_A Gluconate 5-dehydrogena 75.6 30 0.001 28.2 10.8 33 21-53 21-53 (267)
145 3ksm_A ABC-type sugar transpor 75.6 29 0.001 27.7 14.9 41 118-161 179-221 (276)
146 3dbi_A Sugar-binding transcrip 75.6 35 0.0012 28.6 15.2 41 118-161 234-278 (338)
147 3n58_A Adenosylhomocysteinase; 75.5 44 0.0015 30.1 12.2 97 16-140 242-338 (464)
148 1iy8_A Levodione reductase; ox 75.4 27 0.00092 28.3 10.5 32 22-53 14-45 (267)
149 1duv_G Octase-1, ornithine tra 75.3 13 0.00043 32.2 8.4 59 15-75 149-216 (333)
150 3h75_A Periplasmic sugar-bindi 74.9 37 0.0013 28.6 15.2 44 117-163 196-243 (350)
151 3s8m_A Enoyl-ACP reductase; ro 74.4 20 0.0007 31.9 9.8 88 7-94 46-149 (422)
152 3l77_A Short-chain alcohol deh 74.2 20 0.00069 28.4 9.2 31 23-53 4-34 (235)
153 2dq4_A L-threonine 3-dehydroge 73.3 20 0.00067 30.6 9.4 54 11-70 155-210 (343)
154 3uf0_A Short-chain dehydrogena 73.2 21 0.0007 29.4 9.2 55 21-75 31-85 (273)
155 3l49_A ABC sugar (ribose) tran 73.1 35 0.0012 27.6 18.5 44 116-162 178-225 (291)
156 1dxh_A Ornithine carbamoyltran 73.1 13 0.00044 32.1 8.0 60 14-75 148-216 (335)
157 1tjy_A Sugar transport protein 72.7 40 0.0014 28.0 14.2 42 117-161 180-222 (316)
158 3lf2_A Short chain oxidoreduct 72.6 37 0.0013 27.5 10.7 31 22-52 9-39 (265)
159 3gem_A Short chain dehydrogena 72.6 29 0.00098 28.2 9.9 69 23-94 29-97 (260)
160 3hut_A Putative branched-chain 72.5 32 0.0011 28.9 10.6 145 6-162 61-228 (358)
161 3k9c_A Transcriptional regulat 72.4 38 0.0013 27.6 15.0 36 126-163 184-223 (289)
162 3gg9_A D-3-phosphoglycerate de 72.3 23 0.00079 30.7 9.5 116 23-163 161-278 (352)
163 1w6u_A 2,4-dienoyl-COA reducta 72.2 33 0.0011 28.2 10.4 33 21-53 26-58 (302)
164 3m6i_A L-arabinitol 4-dehydrog 72.0 12 0.0004 32.2 7.7 54 11-67 170-223 (363)
165 3d3k_A Enhancer of mRNA-decapp 71.7 18 0.0006 30.0 8.3 32 23-54 87-121 (259)
166 3jy6_A Transcriptional regulat 71.4 38 0.0013 27.2 12.7 35 126-162 180-218 (276)
167 3d3j_A Enhancer of mRNA-decapp 71.3 23 0.00077 30.1 9.1 32 23-54 134-168 (306)
168 1wwk_A Phosphoglycerate dehydr 71.3 31 0.0011 29.1 10.0 104 23-150 143-248 (307)
169 3aoe_E Glutamate dehydrogenase 71.3 21 0.00072 31.8 9.1 51 3-54 199-250 (419)
170 2ioy_A Periplasmic sugar-bindi 71.1 40 0.0014 27.3 14.3 42 117-161 174-216 (283)
171 2ekl_A D-3-phosphoglycerate de 70.6 38 0.0013 28.6 10.4 104 23-150 143-248 (313)
172 3cs3_A Sugar-binding transcrip 70.2 41 0.0014 27.1 10.4 24 127-152 177-200 (277)
173 3l4b_C TRKA K+ channel protien 70.1 37 0.0013 26.6 11.8 49 25-76 3-52 (218)
174 2pi1_A D-lactate dehydrogenase 70.0 26 0.0009 30.0 9.3 114 23-163 142-257 (334)
175 3ek2_A Enoyl-(acyl-carrier-pro 69.5 26 0.00088 28.3 9.0 73 21-94 14-90 (271)
176 4hy3_A Phosphoglycerate oxidor 69.4 50 0.0017 28.7 11.1 115 23-164 177-293 (365)
177 3hcw_A Maltose operon transcri 69.1 45 0.0016 27.2 16.4 42 118-161 181-228 (295)
178 3snr_A Extracellular ligand-bi 69.0 44 0.0015 27.9 10.6 146 6-163 58-225 (362)
179 2bma_A Glutamate dehydrogenase 68.9 18 0.00062 32.7 8.2 50 3-52 233-282 (470)
180 3rss_A Putative uncharacterize 68.9 12 0.00042 34.2 7.3 50 23-72 54-110 (502)
181 3gd5_A Otcase, ornithine carba 68.9 36 0.0012 29.1 9.8 61 14-75 151-217 (323)
182 4fc7_A Peroxisomal 2,4-dienoyl 68.8 46 0.0016 27.1 10.8 33 21-53 27-59 (277)
183 3ipc_A ABC transporter, substr 68.8 48 0.0016 27.7 10.9 146 6-163 59-228 (356)
184 4g2n_A D-isomer specific 2-hyd 68.5 33 0.0011 29.6 9.6 114 23-162 174-289 (345)
185 1zq6_A Otcase, ornithine carba 68.3 16 0.00056 31.7 7.6 45 31-75 206-257 (359)
186 2tmg_A Protein (glutamate dehy 68.0 35 0.0012 30.3 9.8 50 3-53 190-241 (415)
187 1leh_A Leucine dehydrogenase; 67.9 33 0.0011 29.9 9.5 45 4-50 153-201 (364)
188 3ce6_A Adenosylhomocysteinase; 67.7 23 0.00078 32.3 8.8 97 16-140 269-365 (494)
189 1bgv_A Glutamate dehydrogenase 67.7 27 0.00092 31.4 9.1 50 3-53 211-261 (449)
190 3aog_A Glutamate dehydrogenase 67.6 27 0.00093 31.3 9.1 51 3-54 216-267 (440)
191 3h7a_A Short chain dehydrogena 67.4 47 0.0016 26.7 10.2 72 22-93 8-81 (252)
192 3zu3_A Putative reductase YPO4 67.3 67 0.0023 28.4 12.6 91 5-95 30-136 (405)
193 3e8x_A Putative NAD-dependent 66.3 18 0.0006 28.7 7.1 53 21-76 21-74 (236)
194 2r6j_A Eugenol synthase 1; phe 66.3 22 0.00076 29.5 8.1 54 23-76 13-67 (318)
195 2g76_A 3-PGDH, D-3-phosphoglyc 66.3 35 0.0012 29.3 9.3 104 23-150 166-271 (335)
196 3ezl_A Acetoacetyl-COA reducta 66.1 32 0.0011 27.5 8.8 74 21-94 13-89 (256)
197 3brs_A Periplasmic binding pro 66.1 48 0.0016 26.7 10.0 43 118-163 182-226 (289)
198 3d4o_A Dipicolinate synthase s 65.8 45 0.0015 27.7 9.9 47 23-72 156-202 (293)
199 3nrc_A Enoyl-[acyl-carrier-pro 65.7 42 0.0014 27.4 9.6 71 22-94 27-101 (280)
200 3kvo_A Hydroxysteroid dehydrog 65.7 57 0.002 27.9 10.7 73 21-93 45-126 (346)
201 4e5n_A Thermostable phosphite 65.5 29 0.001 29.6 8.7 105 23-150 146-252 (330)
202 3u5t_A 3-oxoacyl-[acyl-carrier 65.0 51 0.0018 26.8 9.9 72 23-94 29-103 (267)
203 2e7j_A SEP-tRNA:Cys-tRNA synth 64.8 25 0.00086 29.6 8.2 51 24-75 71-121 (371)
204 2ew8_A (S)-1-phenylethanol deh 64.6 50 0.0017 26.4 9.7 53 22-75 8-60 (249)
205 3e03_A Short chain dehydrogena 64.6 56 0.0019 26.6 10.6 72 22-93 7-87 (274)
206 1l7d_A Nicotinamide nucleotide 64.3 11 0.00038 33.0 5.9 47 23-72 173-219 (384)
207 3edm_A Short chain dehydrogena 64.3 45 0.0015 26.9 9.4 73 22-94 9-84 (259)
208 2gas_A Isoflavone reductase; N 64.2 15 0.00052 30.3 6.6 54 23-76 4-64 (307)
209 3grk_A Enoyl-(acyl-carrier-pro 64.2 25 0.00085 29.2 7.9 73 21-94 31-107 (293)
210 3r1i_A Short-chain type dehydr 64.0 39 0.0013 27.7 9.0 73 21-93 32-106 (276)
211 3oig_A Enoyl-[acyl-carrier-pro 63.7 56 0.0019 26.3 9.9 71 22-93 8-84 (266)
212 3gyb_A Transcriptional regulat 63.7 55 0.0019 26.2 13.0 43 116-161 166-212 (280)
213 1x13_A NAD(P) transhydrogenase 63.6 14 0.00047 32.7 6.4 48 23-73 173-220 (401)
214 2dbq_A Glyoxylate reductase; D 63.4 49 0.0017 28.2 9.8 104 23-150 151-256 (334)
215 3uve_A Carveol dehydrogenase ( 63.3 60 0.0021 26.5 11.4 32 21-52 11-42 (286)
216 3gvx_A Glycerate dehydrogenase 63.2 32 0.0011 28.9 8.3 113 23-164 123-237 (290)
217 8abp_A L-arabinose-binding pro 63.2 60 0.002 26.4 11.7 45 117-162 186-233 (306)
218 3ic5_A Putative saccharopine d 63.1 31 0.0011 23.5 7.2 49 23-75 7-56 (118)
219 3d64_A Adenosylhomocysteinase; 62.9 27 0.00091 31.9 8.2 97 16-140 272-368 (494)
220 3r3j_A Glutamate dehydrogenase 62.6 23 0.00079 31.9 7.6 50 3-52 220-269 (456)
221 3oec_A Carveol dehydrogenase ( 62.3 68 0.0023 26.8 12.0 32 21-52 46-77 (317)
222 3u0b_A Oxidoreductase, short c 62.1 38 0.0013 30.3 9.1 73 21-94 213-285 (454)
223 2gk4_A Conserved hypothetical 61.9 11 0.00039 30.6 5.0 25 30-54 28-52 (232)
224 1sby_A Alcohol dehydrogenase; 61.8 59 0.002 25.9 9.8 52 22-74 6-60 (254)
225 2qhx_A Pteridine reductase 1; 61.7 72 0.0025 26.8 10.6 100 23-138 48-153 (328)
226 2gdz_A NAD+-dependent 15-hydro 61.6 46 0.0016 26.8 9.0 31 22-52 8-38 (267)
227 2j6i_A Formate dehydrogenase; 61.6 80 0.0027 27.3 11.1 106 23-150 165-273 (364)
228 1sny_A Sniffer CG10964-PA; alp 61.3 32 0.0011 27.7 7.9 53 22-74 22-77 (267)
229 3tsc_A Putative oxidoreductase 61.3 65 0.0022 26.2 11.1 32 21-52 11-42 (277)
230 1g0o_A Trihydroxynaphthalene r 60.9 40 0.0014 27.5 8.6 55 21-75 29-85 (283)
231 3qp9_A Type I polyketide synth 60.9 40 0.0014 30.8 9.2 59 17-75 247-321 (525)
232 3ucx_A Short chain dehydrogena 60.7 50 0.0017 26.6 9.1 74 21-94 11-86 (264)
233 3afn_B Carbonyl reductase; alp 60.6 61 0.0021 25.6 9.8 53 23-75 9-63 (258)
234 3k92_A NAD-GDH, NAD-specific g 60.6 19 0.00066 32.1 6.7 51 3-53 202-252 (424)
235 1jzt_A Hypothetical 27.5 kDa p 60.5 43 0.0015 27.3 8.4 33 23-55 60-95 (246)
236 3i6i_A Putative leucoanthocyan 60.3 23 0.00079 29.9 7.1 54 23-76 12-69 (346)
237 3ijr_A Oxidoreductase, short c 60.0 45 0.0016 27.5 8.8 73 21-93 47-122 (291)
238 3kkj_A Amine oxidase, flavin-c 60.0 10 0.00034 29.8 4.5 28 25-52 5-32 (336)
239 3o26_A Salutaridine reductase; 59.9 70 0.0024 26.1 11.3 90 23-139 14-103 (311)
240 3ksu_A 3-oxoacyl-acyl carrier 59.8 62 0.0021 26.1 9.5 73 22-94 12-89 (262)
241 2ae2_A Protein (tropinone redu 59.8 52 0.0018 26.4 9.0 73 21-93 9-83 (260)
242 4amu_A Ornithine carbamoyltran 59.8 37 0.0013 29.6 8.2 60 14-75 174-243 (365)
243 1oth_A Protein (ornithine tran 59.7 35 0.0012 29.1 8.0 60 14-75 149-215 (321)
244 3lyl_A 3-oxoacyl-(acyl-carrier 59.6 50 0.0017 26.2 8.8 73 22-94 6-80 (247)
245 4da9_A Short-chain dehydrogena 59.1 30 0.001 28.5 7.4 73 21-93 29-104 (280)
246 4e4t_A Phosphoribosylaminoimid 59.1 60 0.002 28.6 9.8 38 18-56 32-69 (419)
247 3pgx_A Carveol dehydrogenase; 58.8 72 0.0025 25.9 11.5 33 21-53 15-47 (280)
248 1pg5_A Aspartate carbamoyltran 58.4 17 0.00058 30.8 5.7 58 14-75 143-205 (299)
249 3get_A Histidinol-phosphate am 58.3 38 0.0013 28.5 8.2 82 24-107 84-166 (365)
250 3q98_A Transcarbamylase; rossm 58.1 24 0.00082 31.2 6.8 44 32-75 209-258 (399)
251 3f9t_A TDC, L-tyrosine decarbo 58.1 27 0.00091 29.6 7.2 53 24-76 88-152 (397)
252 3rot_A ABC sugar transporter, 58.1 74 0.0025 25.8 15.9 40 119-161 181-225 (297)
253 2fr1_A Erythromycin synthase, 58.1 47 0.0016 30.0 9.1 58 18-75 223-285 (486)
254 3ly1_A Putative histidinol-pho 57.9 29 0.00098 29.1 7.3 52 24-76 70-121 (354)
255 3is3_A 17BETA-hydroxysteroid d 57.9 56 0.0019 26.5 8.9 73 21-93 18-93 (270)
256 1gtm_A Glutamate dehydrogenase 57.7 30 0.001 30.7 7.5 51 3-54 192-245 (419)
257 3sds_A Ornithine carbamoyltran 57.7 70 0.0024 27.7 9.6 53 23-75 189-250 (353)
258 2z5l_A Tylkr1, tylactone synth 57.7 49 0.0017 30.1 9.1 58 18-75 256-318 (511)
259 3slk_A Polyketide synthase ext 57.7 8.1 0.00028 37.5 4.0 39 14-52 339-377 (795)
260 1zmt_A Haloalcohol dehalogenas 57.5 21 0.00072 28.8 6.1 62 23-85 3-64 (254)
261 3tzq_B Short-chain type dehydr 57.4 76 0.0026 25.7 10.5 69 22-93 12-82 (271)
262 1v8b_A Adenosylhomocysteinase; 57.2 30 0.001 31.4 7.4 94 19-140 255-348 (479)
263 4ggo_A Trans-2-enoyl-COA reduc 57.1 79 0.0027 27.9 9.9 73 22-94 51-138 (401)
264 3rku_A Oxidoreductase YMR226C; 57.0 44 0.0015 27.6 8.2 24 23-46 35-58 (287)
265 4imr_A 3-oxoacyl-(acyl-carrier 57.0 74 0.0025 25.9 9.5 54 22-75 34-88 (275)
266 3awd_A GOX2181, putative polyo 57.0 51 0.0017 26.2 8.4 54 22-75 14-68 (260)
267 4iin_A 3-ketoacyl-acyl carrier 56.8 54 0.0018 26.5 8.6 73 21-93 29-104 (271)
268 3qiv_A Short-chain dehydrogena 56.8 62 0.0021 25.7 8.9 72 22-93 10-83 (253)
269 3qlj_A Short chain dehydrogena 56.8 65 0.0022 26.9 9.4 73 21-93 27-111 (322)
270 3a28_C L-2.3-butanediol dehydr 56.7 44 0.0015 26.8 8.0 53 23-75 4-59 (258)
271 2yfk_A Aspartate/ornithine car 56.2 26 0.00088 31.2 6.7 44 32-75 206-255 (418)
272 3cq5_A Histidinol-phosphate am 56.1 28 0.00094 29.6 6.9 51 24-76 94-145 (369)
273 3oid_A Enoyl-[acyl-carrier-pro 55.9 57 0.0019 26.3 8.6 72 22-93 5-79 (258)
274 2o8n_A APOA-I binding protein; 55.9 48 0.0016 27.4 8.0 33 23-55 81-116 (265)
275 3s55_A Putative short-chain de 55.9 40 0.0014 27.5 7.7 73 21-93 10-96 (281)
276 1geg_A Acetoin reductase; SDR 55.8 67 0.0023 25.7 9.0 72 23-94 4-77 (256)
277 4iiu_A 3-oxoacyl-[acyl-carrier 55.5 58 0.002 26.3 8.6 71 23-93 28-101 (267)
278 4hp8_A 2-deoxy-D-gluconate 3-d 55.3 47 0.0016 27.1 7.8 54 21-75 9-62 (247)
279 3lop_A Substrate binding perip 55.3 86 0.0029 26.3 10.0 144 6-162 62-230 (364)
280 1u11_A PURE (N5-carboxyaminoim 54.9 51 0.0018 25.6 7.4 44 118-165 66-110 (182)
281 2g1u_A Hypothetical protein TM 54.9 11 0.00036 28.1 3.5 97 23-161 20-118 (155)
282 3v2g_A 3-oxoacyl-[acyl-carrier 54.8 73 0.0025 25.9 9.1 74 21-94 31-107 (271)
283 2hq1_A Glucose/ribitol dehydro 54.7 76 0.0026 24.9 10.2 54 22-75 6-61 (247)
284 2jah_A Clavulanic acid dehydro 54.7 63 0.0021 25.7 8.6 53 22-74 8-61 (247)
285 3grf_A Ornithine carbamoyltran 54.6 55 0.0019 28.0 8.4 51 25-75 164-226 (328)
286 3m9w_A D-xylose-binding peripl 54.6 87 0.003 25.6 16.0 42 118-161 179-222 (313)
287 1mx3_A CTBP1, C-terminal bindi 54.5 1E+02 0.0035 26.4 11.0 105 23-150 169-275 (347)
288 3orq_A N5-carboxyaminoimidazol 54.5 42 0.0014 29.0 7.9 36 18-54 9-44 (377)
289 3p2y_A Alanine dehydrogenase/p 54.4 21 0.00073 31.3 5.8 49 23-74 185-233 (381)
290 1qyd_A Pinoresinol-lariciresin 54.4 33 0.0011 28.2 7.0 54 23-76 6-64 (313)
291 4dgs_A Dehydrogenase; structur 54.4 82 0.0028 27.0 9.6 93 23-142 172-264 (340)
292 4e3z_A Putative oxidoreductase 54.3 73 0.0025 25.7 9.0 73 21-93 26-101 (272)
293 2rhc_B Actinorhodin polyketide 53.9 60 0.002 26.4 8.5 73 22-94 23-97 (277)
294 2rir_A Dipicolinate synthase, 53.9 43 0.0015 27.9 7.6 47 23-72 158-204 (300)
295 3h5o_A Transcriptional regulat 53.8 95 0.0033 25.8 14.5 34 126-161 238-275 (339)
296 1ae1_A Tropinone reductase-I; 53.7 64 0.0022 26.2 8.6 73 21-93 21-95 (273)
297 3rkr_A Short chain oxidoreduct 53.6 65 0.0022 25.9 8.6 73 21-93 29-103 (262)
298 4dio_A NAD(P) transhydrogenase 53.6 27 0.00091 31.0 6.4 49 23-74 191-239 (405)
299 3tpc_A Short chain alcohol deh 53.5 84 0.0029 25.1 9.4 69 22-93 8-78 (257)
300 1qyc_A Phenylcoumaran benzylic 53.5 36 0.0012 27.9 7.1 54 23-76 6-65 (308)
301 3gvp_A Adenosylhomocysteinase 53.5 1.1E+02 0.0036 27.4 10.2 97 16-140 215-311 (435)
302 3c1o_A Eugenol synthase; pheny 53.5 30 0.001 28.7 6.7 54 23-76 6-65 (321)
303 3gbv_A Putative LACI-family tr 53.5 87 0.003 25.2 12.9 42 116-161 190-232 (304)
304 3pk0_A Short-chain dehydrogena 53.5 86 0.003 25.2 10.2 31 22-52 11-41 (262)
305 1yb1_A 17-beta-hydroxysteroid 53.5 62 0.0021 26.2 8.4 74 21-94 31-106 (272)
306 4eue_A Putative reductase CA_C 53.4 1.2E+02 0.0041 26.8 13.4 86 9-94 48-149 (418)
307 4dmm_A 3-oxoacyl-[acyl-carrier 53.2 40 0.0014 27.4 7.3 72 22-93 29-103 (269)
308 1gdh_A D-glycerate dehydrogena 53.1 1E+02 0.0035 26.0 12.1 105 23-150 147-254 (320)
309 1ja9_A 4HNR, 1,3,6,8-tetrahydr 52.9 69 0.0023 25.7 8.6 55 21-75 21-77 (274)
310 2yq5_A D-isomer specific 2-hyd 52.8 92 0.0032 26.7 9.6 114 23-164 149-264 (343)
311 1u7z_A Coenzyme A biosynthesis 52.7 22 0.00074 28.8 5.2 32 21-52 8-55 (226)
312 3tjr_A Short chain dehydrogena 52.6 62 0.0021 26.8 8.4 73 21-93 31-105 (301)
313 4dry_A 3-oxoacyl-[acyl-carrier 52.5 94 0.0032 25.4 10.5 31 22-52 34-64 (281)
314 3op4_A 3-oxoacyl-[acyl-carrier 52.5 52 0.0018 26.3 7.7 70 21-94 9-81 (248)
315 4e12_A Diketoreductase; oxidor 52.3 96 0.0033 25.4 13.0 29 24-52 6-34 (283)
316 3osu_A 3-oxoacyl-[acyl-carrier 52.3 73 0.0025 25.3 8.6 71 23-93 6-79 (246)
317 3gaf_A 7-alpha-hydroxysteroid 52.1 54 0.0018 26.4 7.8 73 21-93 12-86 (256)
318 2c07_A 3-oxoacyl-(acyl-carrier 51.9 33 0.0011 28.2 6.5 74 21-94 44-119 (285)
319 3r3s_A Oxidoreductase; structu 51.9 62 0.0021 26.7 8.3 73 21-93 49-125 (294)
320 3h2s_A Putative NADH-flavin re 51.8 46 0.0016 25.8 7.1 50 23-75 2-51 (224)
321 3v2h_A D-beta-hydroxybutyrate 51.6 97 0.0033 25.2 11.8 29 23-51 27-55 (281)
322 3sg0_A Extracellular ligand-bi 51.4 1.1E+02 0.0037 25.7 13.8 146 6-162 78-248 (386)
323 3oj0_A Glutr, glutamyl-tRNA re 51.4 26 0.00089 25.5 5.2 25 23-47 22-46 (144)
324 3cxt_A Dehydrogenase with diff 51.3 55 0.0019 27.0 7.9 73 21-94 34-109 (291)
325 4a8t_A Putrescine carbamoyltra 51.1 62 0.0021 27.9 8.1 56 21-76 175-236 (339)
326 3l6e_A Oxidoreductase, short-c 51.1 62 0.0021 25.6 7.9 31 23-53 5-35 (235)
327 2uvd_A 3-oxoacyl-(acyl-carrier 51.0 80 0.0027 25.0 8.6 72 22-93 5-79 (246)
328 1fmc_A 7 alpha-hydroxysteroid 51.0 54 0.0018 26.0 7.6 54 22-75 12-66 (255)
329 3ffh_A Histidinol-phosphate am 50.6 22 0.00077 30.0 5.4 52 24-76 86-137 (363)
330 3rg8_A Phosphoribosylaminoimid 50.4 78 0.0027 24.0 7.7 35 127-165 58-92 (159)
331 3tox_A Short chain dehydrogena 50.2 1E+02 0.0035 25.1 11.2 30 22-51 9-38 (280)
332 3icc_A Putative 3-oxoacyl-(acy 50.2 93 0.0032 24.6 9.8 55 21-75 7-63 (255)
333 1v9l_A Glutamate dehydrogenase 50.2 31 0.0011 30.7 6.3 50 3-53 191-241 (421)
334 1edo_A Beta-keto acyl carrier 50.1 86 0.003 24.5 8.7 72 23-94 3-77 (244)
335 3ged_A Short-chain dehydrogena 50.1 94 0.0032 25.2 8.9 69 23-94 4-73 (247)
336 3q2o_A Phosphoribosylaminoimid 50.0 27 0.00093 30.3 5.9 36 18-54 11-46 (389)
337 1zem_A Xylitol dehydrogenase; 50.0 67 0.0023 25.8 8.1 72 22-93 8-81 (262)
338 3e3m_A Transcriptional regulat 50.0 1.1E+02 0.0039 25.5 17.0 34 126-161 249-286 (355)
339 3tfo_A Putative 3-oxoacyl-(acy 49.8 79 0.0027 25.6 8.5 71 23-93 6-78 (264)
340 3gdg_A Probable NADP-dependent 49.7 69 0.0024 25.7 8.1 72 23-94 22-99 (267)
341 2wm3_A NMRA-like family domain 49.7 62 0.0021 26.4 7.9 53 23-76 7-60 (299)
342 4e6p_A Probable sorbitol dehyd 49.7 86 0.003 25.1 8.7 69 22-94 9-80 (259)
343 4a8p_A Putrescine carbamoyltra 49.7 66 0.0023 27.9 8.1 54 23-76 155-214 (355)
344 3kke_A LACI family transcripti 49.6 1E+02 0.0036 25.0 17.9 34 126-161 196-233 (303)
345 1x1t_A D(-)-3-hydroxybutyrate 49.6 84 0.0029 25.1 8.6 54 22-75 5-61 (260)
346 3slk_A Polyketide synthase ext 49.6 68 0.0023 31.0 9.1 58 18-75 527-590 (795)
347 3d8u_A PURR transcriptional re 49.4 97 0.0033 24.6 14.9 34 126-161 180-217 (275)
348 1gee_A Glucose 1-dehydrogenase 49.4 80 0.0027 25.1 8.4 53 23-75 9-63 (261)
349 3sc4_A Short chain dehydrogena 49.2 1.1E+02 0.0037 25.0 10.5 72 22-93 10-90 (285)
350 3pxx_A Carveol dehydrogenase; 49.1 58 0.002 26.4 7.7 73 21-93 10-96 (287)
351 3f1l_A Uncharacterized oxidore 49.0 1E+02 0.0034 24.6 10.7 32 21-52 12-43 (252)
352 2rgy_A Transcriptional regulat 48.8 1E+02 0.0036 24.8 16.7 43 118-163 181-227 (290)
353 2bkw_A Alanine-glyoxylate amin 48.6 45 0.0016 28.1 7.1 53 23-76 60-117 (385)
354 3sju_A Keto reductase; short-c 48.4 69 0.0024 26.1 8.0 71 23-93 26-98 (279)
355 3k5w_A Carbohydrate kinase; 11 48.1 50 0.0017 29.8 7.4 68 2-72 29-103 (475)
356 3t7c_A Carveol dehydrogenase; 48.1 64 0.0022 26.7 7.8 73 21-93 28-114 (299)
357 2zat_A Dehydrogenase/reductase 48.0 78 0.0027 25.3 8.2 54 21-74 14-68 (260)
358 3kjx_A Transcriptional regulat 47.8 1.2E+02 0.0041 25.2 13.9 41 118-161 239-283 (344)
359 4fgs_A Probable dehydrogenase 47.7 91 0.0031 25.7 8.5 72 21-95 29-102 (273)
360 3ctm_A Carbonyl reductase; alc 47.6 1E+02 0.0036 24.8 9.0 54 22-75 35-89 (279)
361 3h9u_A Adenosylhomocysteinase; 47.6 1.5E+02 0.005 26.5 10.2 97 16-140 206-302 (436)
362 3imf_A Short chain dehydrogena 47.5 45 0.0015 26.8 6.6 72 22-93 7-80 (257)
363 2rjo_A Twin-arginine transloca 47.0 1.2E+02 0.0041 25.0 15.0 43 117-161 187-231 (332)
364 3n74_A 3-ketoacyl-(acyl-carrie 47.0 77 0.0026 25.3 8.0 69 22-93 10-80 (261)
365 2qq5_A DHRS1, dehydrogenase/re 46.7 85 0.0029 25.1 8.2 54 22-75 6-60 (260)
366 3o38_A Short chain dehydrogena 46.7 1.1E+02 0.0038 24.4 10.9 30 23-52 24-54 (266)
367 3d6n_B Aspartate carbamoyltran 46.7 40 0.0014 28.3 6.2 41 14-56 140-183 (291)
368 4eso_A Putative oxidoreductase 46.7 99 0.0034 24.7 8.6 71 21-94 8-80 (255)
369 3fsl_A Aromatic-amino-acid ami 46.5 48 0.0016 28.2 7.0 53 24-76 97-150 (397)
370 2dwc_A PH0318, 433AA long hypo 46.5 1.3E+02 0.0046 26.1 10.0 54 23-76 20-90 (433)
371 3a11_A Translation initiation 46.4 52 0.0018 28.3 7.0 59 17-76 138-200 (338)
372 2yfq_A Padgh, NAD-GDH, NAD-spe 46.4 33 0.0011 30.5 5.9 51 3-54 193-244 (421)
373 3c3k_A Alanine racemase; struc 46.3 1.1E+02 0.0039 24.5 12.7 34 126-161 183-220 (285)
374 3v8b_A Putative dehydrogenase, 46.3 71 0.0024 26.2 7.7 71 23-93 30-102 (283)
375 3sx2_A Putative 3-ketoacyl-(ac 46.3 65 0.0022 26.1 7.5 73 21-93 13-99 (278)
376 4hvk_A Probable cysteine desul 46.0 34 0.0012 28.7 5.9 54 23-76 61-120 (382)
377 1a3w_A Pyruvate kinase; allost 46.0 1.5E+02 0.0053 26.9 10.3 123 37-165 283-428 (500)
378 1eg5_A Aminotransferase; PLP-d 46.0 39 0.0013 28.5 6.2 53 24-76 63-121 (384)
379 4ffl_A PYLC; amino acid, biosy 45.9 31 0.0011 29.5 5.6 110 23-139 2-137 (363)
380 2hmt_A YUAA protein; RCK, KTN, 45.8 30 0.001 24.6 4.8 43 25-70 9-51 (144)
381 1id1_A Putative potassium chan 45.2 69 0.0024 23.3 6.9 96 24-160 5-104 (153)
382 1xq1_A Putative tropinone redu 45.2 84 0.0029 25.1 8.0 54 21-74 14-68 (266)
383 3m1a_A Putative dehydrogenase; 45.1 73 0.0025 25.8 7.6 50 23-74 7-56 (281)
384 3k31_A Enoyl-(acyl-carrier-pro 44.7 1.3E+02 0.0044 24.7 9.6 72 21-93 30-105 (296)
385 1uls_A Putative 3-oxoacyl-acyl 44.5 1.2E+02 0.004 24.1 10.3 67 22-92 6-73 (245)
386 3ryc_A Tubulin alpha chain; al 44.4 61 0.0021 29.1 7.3 64 97-160 91-169 (451)
387 3grp_A 3-oxoacyl-(acyl carrier 44.4 98 0.0033 25.0 8.3 70 21-93 27-98 (266)
388 1xg5_A ARPG836; short chain de 44.4 1.2E+02 0.0042 24.4 8.9 32 22-53 33-64 (279)
389 1h5q_A NADP-dependent mannitol 44.4 1.2E+02 0.004 24.1 9.0 72 23-94 16-90 (265)
390 3gvc_A Oxidoreductase, probabl 44.4 79 0.0027 25.8 7.7 68 22-93 30-100 (277)
391 4f2g_A Otcase 1, ornithine car 44.2 12 0.00042 31.8 2.6 60 14-75 148-208 (309)
392 3nyt_A Aminotransferase WBPE; 44.2 42 0.0014 28.4 6.2 53 24-76 52-104 (367)
393 3brq_A HTH-type transcriptiona 44.2 1.2E+02 0.0041 24.2 17.3 35 126-162 199-237 (296)
394 3gdg_A Probable NADP-dependent 44.1 94 0.0032 24.8 8.1 76 59-138 37-112 (267)
395 2fn9_A Ribose ABC transporter, 44.0 53 0.0018 26.5 6.6 41 118-161 183-224 (290)
396 3mje_A AMPHB; rossmann fold, o 43.7 1.4E+02 0.0046 27.1 9.7 54 22-75 240-298 (496)
397 3svt_A Short-chain type dehydr 43.7 1.1E+02 0.0039 24.7 8.6 72 22-93 12-88 (281)
398 3ba1_A HPPR, hydroxyphenylpyru 43.6 1.4E+02 0.0049 25.3 9.4 112 23-163 165-278 (333)
399 1y81_A Conserved hypothetical 43.6 91 0.0031 22.6 7.8 13 5-17 30-42 (138)
400 3gk3_A Acetoacetyl-COA reducta 43.4 74 0.0025 25.7 7.3 70 23-93 27-100 (269)
401 2p91_A Enoyl-[acyl-carrier-pro 43.4 1.3E+02 0.0045 24.4 10.1 72 22-94 22-97 (285)
402 3jtm_A Formate dehydrogenase, 43.3 1.6E+02 0.0054 25.3 13.7 118 23-164 165-284 (351)
403 3rwb_A TPLDH, pyridoxal 4-dehy 43.1 1.2E+02 0.0042 24.0 9.3 70 21-93 6-77 (247)
404 1wma_A Carbonyl reductase [NAD 43.1 81 0.0028 25.1 7.5 52 22-73 5-58 (276)
405 3ioy_A Short-chain dehydrogena 42.9 1.3E+02 0.0045 25.0 9.1 72 22-94 9-85 (319)
406 1vjo_A Alanine--glyoxylate ami 42.9 49 0.0017 28.1 6.4 51 24-76 87-140 (393)
407 4evq_A Putative ABC transporte 42.7 1E+02 0.0035 25.8 8.4 134 22-161 83-239 (375)
408 3ai3_A NADPH-sorbose reductase 42.7 1.1E+02 0.0038 24.4 8.3 32 22-53 8-39 (263)
409 1gud_A ALBP, D-allose-binding 42.6 1.3E+02 0.0045 24.1 14.3 42 117-161 184-227 (288)
410 2o23_A HADH2 protein; HSD17B10 42.6 1.2E+02 0.0043 23.9 10.3 51 22-74 13-63 (265)
411 3ju7_A Putative PLP-dependent 42.6 54 0.0018 28.2 6.6 54 23-76 54-107 (377)
412 3mw9_A GDH 1, glutamate dehydr 42.5 1.7E+02 0.006 26.5 10.0 31 23-53 245-275 (501)
413 3p19_A BFPVVD8, putative blue 42.5 97 0.0033 25.0 7.9 68 23-94 18-85 (266)
414 3dzz_A Putative pyridoxal 5'-p 42.5 61 0.0021 27.4 7.0 52 24-76 87-138 (391)
415 4dqx_A Probable oxidoreductase 42.4 95 0.0032 25.3 7.9 70 21-93 27-98 (277)
416 3zv4_A CIS-2,3-dihydrobiphenyl 42.4 81 0.0028 25.7 7.5 69 22-93 6-76 (281)
417 3bbl_A Regulatory protein of L 42.3 1.3E+02 0.0045 24.1 15.2 34 127-162 188-225 (287)
418 2fwm_X 2,3-dihydro-2,3-dihydro 42.1 1.3E+02 0.0043 23.9 9.5 65 22-94 8-72 (250)
419 2et6_A (3R)-hydroxyacyl-COA de 42.1 1.9E+02 0.0064 26.8 10.6 71 21-94 322-393 (604)
420 3lvm_A Cysteine desulfurase; s 42.1 60 0.002 27.9 6.9 84 24-107 87-176 (423)
421 2vk2_A YTFQ, ABC transporter p 41.8 1.4E+02 0.0048 24.2 14.2 35 126-162 190-228 (306)
422 3kb6_A D-lactate dehydrogenase 41.7 1.6E+02 0.0055 25.0 10.1 115 23-164 142-258 (334)
423 2vhw_A Alanine dehydrogenase; 41.7 64 0.0022 27.9 7.0 46 23-71 169-215 (377)
424 4eyg_A Twin-arginine transloca 41.6 1.5E+02 0.0052 24.6 12.0 145 6-161 61-230 (368)
425 2dgk_A GAD-beta, GADB, glutama 41.6 65 0.0022 28.3 7.2 52 24-76 105-168 (452)
426 4h31_A Otcase, ornithine carba 41.4 97 0.0033 26.8 7.9 52 24-75 183-242 (358)
427 1nff_A Putative oxidoreductase 41.2 89 0.003 25.1 7.5 32 22-53 8-39 (260)
428 3qiv_A Short-chain dehydrogena 41.1 1.3E+02 0.0045 23.7 8.8 73 59-137 24-96 (253)
429 3kax_A Aminotransferase, class 41.0 78 0.0027 26.6 7.4 52 24-76 84-135 (383)
430 1p9o_A Phosphopantothenoylcyst 41.0 23 0.00079 30.2 3.8 101 29-135 63-181 (313)
431 2gqw_A Ferredoxin reductase; f 40.9 72 0.0025 27.7 7.3 55 18-73 142-206 (408)
432 1hdc_A 3-alpha, 20 beta-hydrox 40.9 1.3E+02 0.0044 24.0 8.4 50 22-74 6-56 (254)
433 3rkr_A Short chain oxidoreduct 40.9 1.4E+02 0.0047 23.9 8.7 73 59-137 44-116 (262)
434 3kuu_A Phosphoribosylaminoimid 40.8 1.2E+02 0.004 23.4 7.4 43 119-165 58-101 (174)
435 3ijr_A Oxidoreductase, short c 40.8 1.3E+02 0.0043 24.7 8.5 87 47-138 48-136 (291)
436 3oz2_A Digeranylgeranylglycero 40.7 28 0.00097 29.5 4.5 28 25-52 7-34 (397)
437 2eez_A Alanine dehydrogenase; 40.7 76 0.0026 27.3 7.3 46 24-72 168-214 (369)
438 3ors_A N5-carboxyaminoimidazol 40.6 1.2E+02 0.0041 23.1 7.5 43 119-165 49-92 (163)
439 4dyv_A Short-chain dehydrogena 40.6 1.1E+02 0.0038 24.8 8.0 67 23-93 30-99 (272)
440 4hb9_A Similarities with proba 40.4 33 0.0011 29.4 4.9 29 24-52 3-31 (412)
441 1lu9_A Methylene tetrahydromet 40.3 82 0.0028 25.9 7.2 27 21-47 119-145 (287)
442 2d59_A Hypothetical protein PH 40.1 1.1E+02 0.0036 22.4 7.7 21 31-51 87-107 (144)
443 3k7y_A Aspartate aminotransfer 40.0 1.2E+02 0.0042 26.3 8.6 49 25-75 100-150 (405)
444 2izz_A Pyrroline-5-carboxylate 40.0 1.6E+02 0.0056 24.5 12.2 118 25-164 25-146 (322)
445 2pd4_A Enoyl-[acyl-carrier-pro 39.8 1.5E+02 0.005 23.9 11.5 72 22-94 7-82 (275)
446 1ygy_A PGDH, D-3-phosphoglycer 39.8 2.2E+02 0.0074 25.9 11.1 104 23-150 143-248 (529)
447 1xu9_A Corticosteroid 11-beta- 39.7 1.3E+02 0.0043 24.5 8.3 33 21-53 28-60 (286)
448 3rih_A Short chain dehydrogena 39.7 1.2E+02 0.004 25.0 8.1 72 21-93 41-116 (293)
449 1qsg_A Enoyl-[acyl-carrier-pro 39.5 1.4E+02 0.0049 23.7 10.6 71 23-94 11-85 (265)
450 3euc_A Histidinol-phosphate am 39.5 21 0.00072 30.2 3.4 83 23-107 86-170 (367)
451 3h5t_A Transcriptional regulat 39.5 1.7E+02 0.0058 24.5 14.1 34 126-161 267-304 (366)
452 2fep_A Catabolite control prot 39.5 1.5E+02 0.005 23.8 18.2 35 126-162 194-232 (289)
453 2vz8_A Fatty acid synthase; tr 39.4 1E+02 0.0035 34.1 9.3 58 14-74 1661-1722(2512)
454 1lss_A TRK system potassium up 39.3 95 0.0033 21.6 7.9 47 24-73 6-53 (140)
455 4b4k_A N5-carboxyaminoimidazol 39.2 46 0.0016 25.8 4.9 82 72-165 27-111 (181)
456 2b4q_A Rhamnolipids biosynthes 39.1 1E+02 0.0036 25.0 7.6 32 21-52 29-60 (276)
457 1j32_A Aspartate aminotransfer 39.1 44 0.0015 28.4 5.5 51 24-76 92-143 (388)
458 2ywl_A Thioredoxin reductase r 39.0 50 0.0017 24.6 5.3 32 24-55 3-34 (180)
459 3nnk_A Ureidoglycine-glyoxylat 39.0 65 0.0022 27.4 6.6 53 23-76 65-119 (411)
460 2x5d_A Probable aminotransfera 38.9 89 0.003 26.8 7.6 52 24-76 101-152 (412)
461 3gaf_A 7-alpha-hydroxysteroid 38.8 1.5E+02 0.005 23.6 9.0 74 59-138 27-100 (256)
462 2gcg_A Glyoxylate reductase/hy 38.8 1.8E+02 0.006 24.5 12.3 105 23-150 156-262 (330)
463 1xkq_A Short-chain reductase f 38.7 98 0.0034 25.1 7.4 32 22-53 7-38 (280)
464 3d02_A Putative LACI-type tran 38.7 1.5E+02 0.0052 23.8 17.3 42 117-161 180-223 (303)
465 3f4w_A Putative hexulose 6 pho 38.7 1.2E+02 0.004 23.4 7.6 37 37-73 69-108 (211)
466 3mc6_A Sphingosine-1-phosphate 38.7 21 0.0007 32.0 3.4 53 24-76 128-187 (497)
467 1sc6_A PGDH, D-3-phosphoglycer 38.6 2E+02 0.0069 25.2 10.8 101 23-150 146-249 (404)
468 2wyu_A Enoyl-[acyl carrier pro 38.6 1.5E+02 0.0051 23.6 10.2 71 22-93 9-83 (261)
469 2ph3_A 3-oxoacyl-[acyl carrier 38.6 1.1E+02 0.0037 23.9 7.5 51 23-73 3-55 (245)
470 2ekp_A 2-deoxy-D-gluconate 3-d 38.5 1.2E+02 0.004 23.9 7.7 49 23-76 4-52 (239)
471 1jye_A Lactose operon represso 38.4 1.7E+02 0.0059 24.3 12.6 41 118-161 230-274 (349)
472 1kjq_A GART 2, phosphoribosylg 38.4 1.5E+02 0.0053 25.1 9.0 54 23-76 12-82 (391)
473 3ado_A Lambda-crystallin; L-gu 38.4 38 0.0013 28.9 4.8 132 23-167 7-151 (319)
474 1yde_A Retinal dehydrogenase/r 38.3 1.5E+02 0.0053 23.8 9.3 69 21-93 9-79 (270)
475 2cul_A Glucose-inhibited divis 38.3 36 0.0012 27.0 4.5 30 25-54 6-35 (232)
476 4grd_A N5-CAIR mutase, phospho 38.3 47 0.0016 25.6 4.8 44 118-165 57-101 (173)
477 3kzv_A Uncharacterized oxidore 38.1 69 0.0023 25.6 6.3 68 23-93 4-75 (254)
478 3tum_A Shikimate dehydrogenase 38.0 95 0.0033 25.6 7.1 44 9-53 113-156 (269)
479 3o1i_D Periplasmic protein TOR 37.8 1.6E+02 0.0053 23.7 13.1 38 118-160 187-226 (304)
480 3ryc_B Tubulin beta chain; alp 37.8 61 0.0021 29.1 6.2 66 97-163 89-172 (445)
481 3ucx_A Short chain dehydrogena 37.8 1.6E+02 0.0053 23.6 8.7 85 47-137 12-98 (264)
482 3isl_A Purine catabolism prote 37.7 1E+02 0.0035 26.2 7.7 51 25-76 65-117 (416)
483 2o20_A Catabolite control prot 37.5 1.7E+02 0.0059 24.0 17.0 33 127-161 239-275 (332)
484 3jx9_A Putative phosphoheptose 37.5 42 0.0014 25.8 4.5 38 16-53 73-112 (170)
485 3ef6_A Toluene 1,2-dioxygenase 37.5 98 0.0033 26.8 7.6 50 23-72 144-203 (410)
486 4eb5_A Probable cysteine desul 37.4 71 0.0024 26.8 6.5 52 23-76 61-120 (382)
487 3ftp_A 3-oxoacyl-[acyl-carrier 37.4 92 0.0032 25.2 7.0 72 21-93 28-102 (270)
488 3frk_A QDTB; aminotransferase, 37.3 55 0.0019 27.7 5.8 53 24-76 53-105 (373)
489 3td9_A Branched chain amino ac 37.3 1.8E+02 0.0061 24.2 14.1 147 5-162 69-238 (366)
490 3a2b_A Serine palmitoyltransfe 37.3 1.3E+02 0.0046 25.4 8.4 52 24-76 105-156 (398)
491 3hg7_A D-isomer specific 2-hyd 37.2 1.9E+02 0.0064 24.5 9.0 117 23-165 141-259 (324)
492 3oow_A Phosphoribosylaminoimid 37.2 1.4E+02 0.0047 22.8 8.4 44 118-165 50-94 (166)
493 4fk1_A Putative thioredoxin re 37.2 36 0.0012 28.0 4.5 28 25-52 9-36 (304)
494 3e61_A Putative transcriptiona 37.2 1.5E+02 0.0053 23.4 14.2 34 126-161 176-213 (277)
495 1u08_A Hypothetical aminotrans 36.8 67 0.0023 27.2 6.3 51 24-76 93-144 (386)
496 3trh_A Phosphoribosylaminoimid 36.7 1.4E+02 0.0048 22.8 7.3 35 127-165 61-95 (169)
497 2x7x_A Sensor protein; transfe 36.6 1.8E+02 0.006 23.9 14.9 44 117-163 179-224 (325)
498 2duw_A Putative COA-binding pr 36.6 1.2E+02 0.0039 22.2 6.8 51 45-100 70-121 (145)
499 1t3i_A Probable cysteine desul 36.5 41 0.0014 28.8 4.9 53 24-76 92-151 (420)
500 3tb6_A Arabinose metabolism tr 36.5 1.6E+02 0.0055 23.4 15.0 32 128-161 202-237 (298)
No 1
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=8.3e-61 Score=434.43 Aligned_cols=276 Identities=74% Similarity=1.194 Sum_probs=255.1
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.+++++|.++||.++||++|+||||+|+|++|+++|++|+||||++++..|+++++.|||+|+++++..++
T Consensus 154 KdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~ 233 (430)
T 4aec_A 154 KDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGM 233 (430)
T ss_dssp THHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCCh
Confidence 89999999999999999999988899999999999999999999999999999999999999999999999999864568
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++.++++|++||+||.+++.||.|+++||++|+++.||+||+|+|+||+++|++.++|+.+|+++||||
T Consensus 234 ~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigV 313 (430)
T 4aec_A 234 TGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGV 313 (430)
T ss_dssp HHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 88999999999887789999999999998899999999999999778999999999999999999999999999999999
Q ss_pred ecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCC
Q 023801 161 EPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE 240 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~ 240 (277)
||++++.+..+++.++.++||+.+..|+.+..+++|+++.|+|+|++++++.|+++||+++||++|+++++++++++++.
T Consensus 314 ep~~s~~l~~g~~~~~~i~Gl~~~~~p~~l~~~~vd~~v~Vsd~ea~~a~r~La~~eGi~vepssGaa~aAal~la~~~~ 393 (430)
T 4aec_A 314 EPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPE 393 (430)
T ss_dssp EEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCTTTCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHTTSGG
T ss_pred EeCCCcHhhCCCccceeehhccCCCCcHHHHHHhCCeEEEECHHHHHHHHHHHHHHCCCEEehHHHHHHHHHHHHHHhcC
Confidence 99999988877888888899998877888888999999999999999999999999999999999999999999887654
Q ss_pred CCCCeEEEEecCCCCCCcchhccHHHHHhhhccccC
Q 023801 241 NAGKLIVVIFPSFGERYLSSVLFESVRKEAESMTFE 276 (277)
Q Consensus 241 ~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~~~~~~ 276 (277)
.++++||+|+||+|.||+|+.+|+++.+..+.++++
T Consensus 394 ~~g~~VV~Il~d~G~rylst~~~~~~~~~~~~~~~~ 429 (430)
T 4aec_A 394 NAGKLIAVVFPSFGERYLSTPLFQSIREEVEKMQPE 429 (430)
T ss_dssp GTTCEEEEEECBBGGGGTTSHHHHHHHHHC------
T ss_pred CCcCeEEEEECCCCccccchhhhhhhhhhhhcCccc
Confidence 578999999999999999999999999999888875
No 2
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=2.3e-60 Score=423.69 Aligned_cols=274 Identities=61% Similarity=1.066 Sum_probs=252.8
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||+|.++|.+|+++|.++||.++||++|+||||+|+|++|+++|++|+||||+++++.|+.+++.|||+|+.+++..++
T Consensus 66 K~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~ 145 (344)
T 3vc3_A 66 ADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGM 145 (344)
T ss_dssp THHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcc
Confidence 89999999999999999999988999999999999999999999999999999999999999999999999999865455
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
......+.++..+.++.++++||+||.+++.||+|+++||++|+++.||+||+|+|+||+++|++.++|+.+|+++||+|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigV 225 (344)
T 3vc3_A 146 GGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGV 225 (344)
T ss_dssp HHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred hHHHHHHHHHHhhccCceeccccccchhHHHHHHHHHHHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEE
Confidence 56666666667777789999999999988889999999999999888999999999999999999999999999999999
Q ss_pred ecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCC
Q 023801 161 EPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE 240 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~ 240 (277)
||.+++.+..+++.++.+++++.+..+...+...+|+++.|+|+|++++++.|+++||++++|+||+++++++++++...
T Consensus 226 ep~~s~~l~~~~~~~~~i~g~g~~~~~~~~~~~~~d~~v~v~d~eai~a~~~L~~~eGi~v~~ssga~~~aAl~~a~~~~ 305 (344)
T 3vc3_A 226 EPSESNVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQLPE 305 (344)
T ss_dssp EEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSGG
T ss_pred cCCCChhhcCCCCCCeeEecccccccCcccchhhceEEEEECHHHHHHHHHHHHHHCCCEEehhHHHHHHHHHHHhcccc
Confidence 99999999888888888888888777777778889999999999999999999999999999999999999999887655
Q ss_pred CCCCeEEEEecCCCCCCcchhccHHHHHhhhccc
Q 023801 241 NAGKLIVVIFPSFGERYLSSVLFESVRKEAESMT 274 (277)
Q Consensus 241 ~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~~~~ 274 (277)
.++++||+|+||+|+||+|+.+|++|+.+.+++.
T Consensus 306 ~~g~~VV~il~d~G~rYlst~~~~~~~~e~~~~~ 339 (344)
T 3vc3_A 306 NKGKLIVTVHPSFGERYLSSVLFQELRQEAENMQ 339 (344)
T ss_dssp GTTCEEEEEECBBGGGGTTSTTTHHHHHHHHTCC
T ss_pred CCCCEEEEEECCCchhhccchhhHHHHHHhccCC
Confidence 6889999999999999999999999998877653
No 3
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=5.4e-60 Score=420.07 Aligned_cols=275 Identities=53% Similarity=0.896 Sum_probs=250.5
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.+++++|.++||.+.||++|+||||+|+|++|+++|++|+||||++++..|+++++.|||+|++++...++
T Consensus 51 K~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 130 (334)
T 3tbh_A 51 KDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGM 130 (334)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCc
Confidence 79999999999999999999854369999999999999999999999999999999999999999999999999864458
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+.+++++.++++|++||+||.|+..||.|+++||++|+++.||+||+|+|+|||++|++.++++.+|.+|||||
T Consensus 131 ~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigV 210 (334)
T 3tbh_A 131 KGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAV 210 (334)
T ss_dssp HHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred hHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEE
Confidence 88999999999887789999999999988889999999999999778999999999999999999999999999999999
Q ss_pred ecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCC
Q 023801 161 EPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE 240 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~ 240 (277)
||++++++..+++..+.+++++.+..|+.+..+++|+++.|+|+|++++++.|++++|+++||+||+++++++++++++.
T Consensus 211 e~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssgaa~aa~~~~~~~~~ 290 (334)
T 3tbh_A 211 EPTESPVLSGGKPGPHKIQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERPE 290 (334)
T ss_dssp EETTSCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHSGG
T ss_pred eeCCchHhhCCCcCCeecCCCCCCcCCHHHHHHhCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhcc
Confidence 99999988877777777889988877888888999999999999999999999999999999999999999999887643
Q ss_pred CCCCeEEEEecCCCCCCcchhccHHHHHhhhcccc
Q 023801 241 NAGKLIVVIFPSFGERYLSSVLFESVRKEAESMTF 275 (277)
Q Consensus 241 ~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~~~~~ 275 (277)
.++++||+|+|++|+||+|+.+|++++.+.++++.
T Consensus 291 ~~g~~Vv~v~t~~g~ky~~~~~~~~~~~~~~~~~~ 325 (334)
T 3tbh_A 291 MEGKTIVTVIPSFGERYLSTTLYRSVRDEVSSLPV 325 (334)
T ss_dssp GTTCEEEEEECBBGGGGTTSGGGTHHHHC------
T ss_pred CCcCeEEEEECCCCccccCchhhhhhHHHhhhcch
Confidence 47899999999999999999999999888777653
No 4
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=1.8e-58 Score=408.87 Aligned_cols=275 Identities=82% Similarity=1.261 Sum_probs=252.5
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.++|.+++++|.++||.++||++|+||||+|+|++|+++|++|+||||.++++.|+++++.|||+|+.+++..+|
T Consensus 46 K~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 125 (322)
T 1z7w_A 46 KDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGM 125 (322)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCH
Confidence 79999999999999999999877899999999999999999999999999999999999999999999999999864457
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++.++++|++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++|+.+|.+||++|
T Consensus 126 ~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 205 (322)
T 1z7w_A 126 KGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGV 205 (322)
T ss_dssp HHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEE
Confidence 88999999999888789999999999997789999999999999767999999999999999999999999999999999
Q ss_pred ecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCC
Q 023801 161 EPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE 240 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~ 240 (277)
||++++.+..+++.+..+++++.+..|+.+...++|+++.|+|+|++++++.|++++|+++||+||+++++++++.++..
T Consensus 206 e~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~~pssga~~aaa~~~~~~~~ 285 (322)
T 1z7w_A 206 EPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPE 285 (322)
T ss_dssp EEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTSGG
T ss_pred ecCCCccccCCCCCCcccCcCcCCCCChhhhHHhCCEEEEECHHHHHHHHHHHHHHcCceEchhHHHHHHHHHHHHHhcC
Confidence 99999888766666667888887777778888899999999999999999999999999999999999999999877643
Q ss_pred CCCCeEEEEecCCCCCCcchhccHHHHHhhhcccc
Q 023801 241 NAGKLIVVIFPSFGERYLSSVLFESVRKEAESMTF 275 (277)
Q Consensus 241 ~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~~~~~ 275 (277)
.++++||+|+|++|.||+++.+|+.|....+.+..
T Consensus 286 ~~~~~vv~i~tg~g~k~~~~~~~~~~~~~~~~~~~ 320 (322)
T 1z7w_A 286 NAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTF 320 (322)
T ss_dssp GTTCEEEEEECBBGGGGTTSGGGHHHHHHHHTCCC
T ss_pred CCCCeEEEEECCCCcccccchhhhHHHHhcccccc
Confidence 46789999999999999999999999988777643
No 5
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=3.1e-57 Score=399.54 Aligned_cols=266 Identities=56% Similarity=0.970 Sum_probs=234.4
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.+++++|.++|| ++||++|+||||+|+|++|+++|++|+||||.++++.|+++++.+||+|+.++...+|
T Consensus 47 K~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~ 125 (313)
T 2q3b_A 47 KDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGM 125 (313)
T ss_dssp HHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCH
Confidence 799999999999999999887 5799999999999999999999999999999999999999999999999999964457
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++.+..+++++|+||.++..||.|+++||++|++++||+||+|+|+||+++|++.++++.+|.+|||+|
T Consensus 126 ~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~v 205 (313)
T 2q3b_A 126 SGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAV 205 (313)
T ss_dssp HHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEE
Confidence 88999999999887555889999999996677999999999999667999999999999999999999999999999999
Q ss_pred ecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCC
Q 023801 161 EPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE 240 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~ 240 (277)
||++++.+...+...+.+++++.+..|+.+....+|+++.|+|+|++++++.|++++|+++||+||+++++++++.+++.
T Consensus 206 e~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~ 285 (313)
T 2q3b_A 206 EPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPE 285 (313)
T ss_dssp EETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTCGG
T ss_pred eeCCCccccCCCCCCcccCCcCCCCCChhhhHhhccEEEEECHHHHHHHHHHHHHHcCceEchHHHHHHHHHHHHHHhcC
Confidence 99999877655556667788887767777878889999999999999999999999999999999999999999877643
Q ss_pred CCCCeEEEEecCCCCCCcchhccHHHH
Q 023801 241 NAGKLIVVIFPSFGERYLSSVLFESVR 267 (277)
Q Consensus 241 ~~~~~vv~i~~~gG~~~~~~~~~~~~~ 267 (277)
.++++||+++|++|.||+++.+|++|.
T Consensus 286 ~~~~~vv~v~~~~g~ky~~~~~~~~~~ 312 (313)
T 2q3b_A 286 NAGKLIVVVLPDFGERYLSTPLFADVA 312 (313)
T ss_dssp GTTCEEEEEECBBSGGGC---------
T ss_pred CCCCEEEEEECCCCcccccchhhhhhh
Confidence 467899999999999999999999885
No 6
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=4.5e-57 Score=399.06 Aligned_cols=266 Identities=56% Similarity=0.917 Sum_probs=236.7
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.+++++|.++|+ ++||++||||||+|+|++|+++|++|+||||+++++.|+++++.+||+|+.+++..+|
T Consensus 42 K~R~a~~~i~~a~~~g~~~~~-~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~ 120 (316)
T 1y7l_A 42 KCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGM 120 (316)
T ss_dssp HHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCH
Confidence 799999999999999998887 6799999999999999999999999999999999999999999999999999864348
Q ss_pred HHHHHHHHHHHHhCCCe-EecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC-CCcEEE
Q 023801 81 KGAVQKAEEILAKTPNA-YMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLY 158 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~-~~~~vi 158 (277)
+++.+.+++++++.++. ++++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++++.+ |.+|||
T Consensus 121 ~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi 200 (316)
T 1y7l_A 121 KGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSV 200 (316)
T ss_dssp HHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEE
T ss_pred HHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEE
Confidence 88999999999887666 8899999999877789999999999996569999999999999999999999998 999999
Q ss_pred EEecCCCCccCC---CC---CCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHH
Q 023801 159 GIEPTESPVLSG---GK---PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 232 (277)
Q Consensus 159 gV~~~~~~~~~~---~~---~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~ 232 (277)
+|||++++.+.. ++ ..++.+++++.+..|+.+...++|+++.|+|+|++++++.|++++|+++||+||++++++
T Consensus 201 ~ve~~~~~~~~~~~~g~~~~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~~laa~ 280 (316)
T 1y7l_A 201 AVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAA 280 (316)
T ss_dssp EEEETTSCHHHHHHHTCCCCCCCCSCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred EEecCCCccccccccCCccCCCCcccCcCCCCCCCchhhHhhCCEEEEECHHHHHHHHHHHHHhhCCeEcHHHHHHHHHH
Confidence 999999976532 11 234567888877677778888899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCeEEEEecCCCCCCcchhccHHHH
Q 023801 233 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVR 267 (277)
Q Consensus 233 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~ 267 (277)
++++++...++++||+|+|++|.||+|+.+|++|.
T Consensus 281 ~~~~~~~~~~~~~vv~i~tg~g~k~~~~~~~~~~~ 315 (316)
T 1y7l_A 281 DRLAKLPEFADKLIVVILPSASERYLSTALFEGIE 315 (316)
T ss_dssp HHHHTSGGGTTCEEEEEECBBCSSCCCTTTC----
T ss_pred HHHHHhcCCCCCeEEEEECCCCcccCCcccccccc
Confidence 99877653368899999999999999999998774
No 7
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=2.9e-56 Score=391.50 Aligned_cols=259 Identities=43% Similarity=0.758 Sum_probs=233.5
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.+++++|.++|| ++||++||||||+|+|++|+++|++|+||||+++++.|+++++.+||+|+.++...+|
T Consensus 41 K~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~ 119 (303)
T 2v03_A 41 KDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGM 119 (303)
T ss_dssp HHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCH
Confidence 799999999999999999887 6799999999999999999999999999999999999999999999999999975568
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++.+++ |++||+||.++..||.|+++||++|++..||+||+|+|+||+++|++.++++.+|.+|||+|
T Consensus 120 ~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 198 (303)
T 2v03_A 120 EGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGL 198 (303)
T ss_dssp HHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEE
T ss_pred HHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEE
Confidence 89999999998885577 99999999986679999999999999656999999999999999999999999999999999
Q ss_pred ecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCC
Q 023801 161 EPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE 240 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~ 240 (277)
||++++++.. +++++.+..|+.+...++|+++.|+|+|++++++.|++++|+++||+||+++++++++.++.
T Consensus 199 e~~~~~~~~~-------~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~~pssa~alaa~~~~~~~~- 270 (303)
T 2v03_A 199 QPEEGSSIPG-------IRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAAAN- 270 (303)
T ss_dssp EECTTCCCTT-------CCCCCGGGCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHS-
T ss_pred cCCCCccccc-------CCcCCCCCCCcccchHHCCEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHC-
Confidence 9999987643 55666655677777888999999999999999999999999999999999999999988764
Q ss_pred CCCCeEEEEecCCCCCCcchhccHHHHHhh
Q 023801 241 NAGKLIVVIFPSFGERYLSSVLFESVRKEA 270 (277)
Q Consensus 241 ~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~ 270 (277)
++++||+|+|++|.||+|+.+|++|+...
T Consensus 271 -~~~~vv~i~tg~~~ky~~~~~~~~~~~~~ 299 (303)
T 2v03_A 271 -PDAVVVAIICDRGDRYLSTGVFGEEHFSQ 299 (303)
T ss_dssp -TTCEEEEEECBBSGGGGGGTTTCC-----
T ss_pred -CCCeEEEEECCCCcccccchhcHHHHHhc
Confidence 78899999999999999999999887653
No 8
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=1.3e-56 Score=397.14 Aligned_cols=257 Identities=38% Similarity=0.626 Sum_probs=233.5
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.++|.+++++|.++|+ ++||++|+||||+|+|++|+++|++|+||||+++++.|+++++.+||+|+.++...++
T Consensus 53 K~R~a~~~l~~a~~~g~l~~~-~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 131 (325)
T 3dwg_A 53 KDRPAVRMIEQAEADGLLRPG-ATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGS 131 (325)
T ss_dssp THHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTH
T ss_pred HHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCH
Confidence 899999999999999999988 5799999999999999999999999999999999999999999999999999975578
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++.++++|++||+||.++..||.|+++||++|++ .||+||+|+|+|||++|++.++++.+|.++||+|
T Consensus 132 ~~~~~~a~~l~~~~~~~~~~~~~~np~~~~~g~~t~~~Ei~~q~~-~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigV 210 (325)
T 3dwg_A 132 NTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADLP-EITHFVAGLGTTGTLMGTGRFLREHVANVKIVAA 210 (325)
T ss_dssp HHHHHHHHHHHHHCTTSBCCCTTTCHHHHHHHHHTHHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCeEeCCCCCCHHHHHHHHHHHHHHHHHhcC-CCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 999999999999886689999999999966899999999999995 4999999999999999999999999999999999
Q ss_pred ecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCC
Q 023801 161 EPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE 240 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~ 240 (277)
||++++.+. .+++++.+..|+.+...++|+++.|+|+|++++++.|++++|+++||++|++++++++++++..
T Consensus 211 e~~~~~~~~-------~~~~i~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssa~a~aa~~~~~~~~~ 283 (325)
T 3dwg_A 211 EPRYGEGVY-------ALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGAL 283 (325)
T ss_dssp EEECCGGGG-------CCSSGGGCCCCTTCCGGGCSEEEEEEHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCcchh-------ccCcccCCcCcccccHhhCCeEEEECHHHHHHHHHHHHHHcCceechhHHHHHHHHHHHHHHhc
Confidence 999997662 3456666667778888899999999999999999999999999999999999999999876542
Q ss_pred CCCCe--EEEEecCCCCCCcchhccHHH
Q 023801 241 NAGKL--IVVIFPSFGERYLSSVLFESV 266 (277)
Q Consensus 241 ~~~~~--vv~i~~~gG~~~~~~~~~~~~ 266 (277)
.++++ ||+|+|++|.||+|+.+|++.
T Consensus 284 ~~g~~~~Vv~i~~g~g~ky~~~~~~~~~ 311 (325)
T 3dwg_A 284 AAGERADIALVVADAGWKYLSTGAYAGS 311 (325)
T ss_dssp HHTCCEEEEEEECBBGGGGGGGTTTSSC
T ss_pred cCCCCCeEEEEECCCCccccCchhhcCC
Confidence 24566 999999999999999666543
No 9
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=2.1e-56 Score=398.51 Aligned_cols=266 Identities=42% Similarity=0.771 Sum_probs=242.9
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.++.++|.++|| ++||++||||||+|+|++|+++|++|+||||+++++.|+++++.+||+|+.+++..++
T Consensus 58 KdR~a~~~l~~a~~~g~~~~g-~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 136 (343)
T 2pqm_A 58 KDRVGFNIVYQAIKDGRLKPG-MEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGM 136 (343)
T ss_dssp HHHHHHHHHHHHHHHTSSCTT-CEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCH
Confidence 799999999999999999887 5799999999999999999999999999999999999999999999999999864457
Q ss_pred HHHHHHHHHHHHhCCCe-EecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEE
Q 023801 81 KGAVQKAEEILAKTPNA-YMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYG 159 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vig 159 (277)
+++.+.+++++++.+.. ++++||+||.++..||.|++ ||++|+++.||+||+|+|+||+++|++.++++.+|.+|||+
T Consensus 137 ~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vig 215 (343)
T 2pqm_A 137 PGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIA 215 (343)
T ss_dssp HHHHHHHHHHHHHSTTTEEECCTTTCHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHhCCCcEEECCCCCChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEE
Confidence 88999999999887655 77899999998778999999 99999966799999999999999999999999999999999
Q ss_pred EecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcC
Q 023801 160 IEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRP 239 (277)
Q Consensus 160 V~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~ 239 (277)
|||++++.+..++..++.+++++.+..|+.+...++|+++.|+|+|++++++.|++++|+++||+||+++++++++++++
T Consensus 216 Ve~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~ 295 (343)
T 2pqm_A 216 VEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKEAEKP 295 (343)
T ss_dssp EEEGGGCTTTTCCCCCCCCTTCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSG
T ss_pred EecCCCcccccCCCCCeecCccCCCCCCHHHHHHhCCeEEEECHHHHHHHHHHHHHHhCCeEchhHHHHHHHHHHHHHhc
Confidence 99999988776666667788988777788888889999999999999999999999999999999999999999987764
Q ss_pred CCCCCeEEEEecCCCCCCcchhccHHHHH
Q 023801 240 ENAGKLIVVIFPSFGERYLSSVLFESVRK 268 (277)
Q Consensus 240 ~~~~~~vv~i~~~gG~~~~~~~~~~~~~~ 268 (277)
..++++||+|+|++|.||+|+.+|++|..
T Consensus 296 ~~~~~~vv~i~tg~g~ky~~~~~~~~~~~ 324 (343)
T 2pqm_A 296 ENEGKTIVIIVPSCGERYLSTDLYKIKDE 324 (343)
T ss_dssp GGTTCEEEEEECBBGGGGTTSSTTTSCCC
T ss_pred CCCCCeEEEEEcCCCccccchhhhhhHhh
Confidence 23688999999999999999999987754
No 10
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=1.6e-55 Score=387.13 Aligned_cols=261 Identities=52% Similarity=0.867 Sum_probs=236.9
Q ss_pred CChhHHHHHHHHHHcCCCCCCCc--EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC
Q 023801 1 MCRIGYSMISDAEAKGLITPGES--VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK 78 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~--~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~ 78 (277)
|||++.+++.+++++|.++|| + +||++|+||||+|+|++|+++|++|+||||+++++.|+++++.+||+|+.+++..
T Consensus 40 K~R~a~~~l~~a~~~g~~~~g-~~~~vv~assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~ 118 (304)
T 1ve1_A 40 KDRPAWYMIKDAEERGILRPG-SGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPER 118 (304)
T ss_dssp THHHHHHHHHHHHHTTSCCTT-SCCEEEESCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHHHHHHHHcCCCCCC-CccEEEEeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCC
Confidence 899999999999999998887 5 7999999999999999999999999999999999999999999999999999744
Q ss_pred ChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEE
Q 023801 79 GMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLY 158 (277)
Q Consensus 79 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vi 158 (277)
+|+++.+.+++++++ ++++|++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++++..|.+|||
T Consensus 119 ~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi 197 (304)
T 1ve1_A 119 RMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVI 197 (304)
T ss_dssp HHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEE
T ss_pred CHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEE
Confidence 488899999998887 4788999999999844447999999999996679999999999999999999999999999999
Q ss_pred EEecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhc
Q 023801 159 GIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKR 238 (277)
Q Consensus 159 gV~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~ 238 (277)
+|||++++.+..+++..+.+++++.+..|+.+...++|+++.|+|+|++++++.|++++|+++||+||++++++++++++
T Consensus 198 ~ve~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~ 277 (304)
T 1ve1_A 198 AVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARE 277 (304)
T ss_dssp EEEEGGGCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHH
T ss_pred EEecCCCccccCCCCCCcccCCCCCCCCChhhhhhhCCEEEEECHHHHHHHHHHHHHHhCcEEcHHHHHHHHHHHHHHHh
Confidence 99999998877666666677888877778888888999999999999999999999999999999999999999998765
Q ss_pred CCCCCCeEEEEecCCCCCCcchhccH
Q 023801 239 PENAGKLIVVIFPSFGERYLSSVLFE 264 (277)
Q Consensus 239 ~~~~~~~vv~i~~~gG~~~~~~~~~~ 264 (277)
. .++++||+|+|++|.||+|+.+|+
T Consensus 278 ~-~~~~~vv~i~tg~g~ky~~~~~~~ 302 (304)
T 1ve1_A 278 L-GPGKRVACISPDGGWKYLSTPLYA 302 (304)
T ss_dssp H-CTTCEEEEEECBBSGGGTTSTTTC
T ss_pred c-CCCCeEEEEECCCCccCCCcccCC
Confidence 3 267899999999999999985664
No 11
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=5.6e-56 Score=390.71 Aligned_cols=261 Identities=57% Similarity=0.921 Sum_probs=208.3
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.+++++|.++|| ++||++|+||||+|+|++|+++|++|+||||+++++.|+++++.+||+|+.++...++
T Consensus 45 K~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~ 123 (308)
T 2egu_A 45 KDRIALAMIEAAEKAGKLKPG-DTIVEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGM 123 (308)
T ss_dssp HHHHHHHHHHHHHHTTCCCTT-CEEEEECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCH
Confidence 799999999999999999887 5799999999999999999999999999999999999999999999999999964457
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++.+ +++++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++++.+|.+|||+|
T Consensus 124 ~~~~~~a~~l~~~~~-~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigv 202 (308)
T 2egu_A 124 RGAIAKAEELVREHG-YFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAV 202 (308)
T ss_dssp HHHHHHHHHHHHHHC-CBCC--------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHHCc-CCcCCcCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEE
Confidence 889999999988874 5888999999986789999999999999667999999999999999999999999999999999
Q ss_pred ecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCC
Q 023801 161 EPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE 240 (277)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~ 240 (277)
||++++.+..++...+.+++++.+..|+.+....+|+++.|+|+|++++++.|++++|+++||+||+++++++++++++
T Consensus 203 e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~~- 281 (308)
T 2egu_A 203 EPADSPVLSGGKPGPHKIQGIGAGFVPDILDTSIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIHAALKVAKEL- 281 (308)
T ss_dssp EECC-----------------------CCCCCCSCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHH-
T ss_pred EeCCCccccCCCCCCcccCccCCCCCCHhHHHHhcCeEEEECHHHHHHHHHHHHHHhCceEcHHHHHHHHHHHHHHHhc-
Confidence 9999987765555566678888766677777888999999999999999999999999999999999999999987764
Q ss_pred CCCCeEEEEecCCCCCCcchhccH
Q 023801 241 NAGKLIVVIFPSFGERYLSSVLFE 264 (277)
Q Consensus 241 ~~~~~vv~i~~~gG~~~~~~~~~~ 264 (277)
.++++||+|+|++|.||+|+.+|+
T Consensus 282 ~~~~~vv~i~tg~g~ky~~~~~~~ 305 (308)
T 2egu_A 282 GKGKKVLAIIPSNGERYLSTPLYQ 305 (308)
T ss_dssp CTTCEEEEEECBBGGGGTTSSTTC
T ss_pred CCCCeEEEEECCCCcccccchhcc
Confidence 478899999999999999987773
No 12
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=4.3e-54 Score=392.34 Aligned_cols=270 Identities=39% Similarity=0.618 Sum_probs=236.6
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.++|.+++++|.++|+ ++||++|+||||+|+|++|+++|++|+||||+.++..|+++++.|||+|++++...+|
T Consensus 141 KdR~a~~~i~~a~~~G~l~~g-~tVV~aSsGN~G~AlA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~ 219 (435)
T 1jbq_A 141 KDRISLRMIEDAERDGTLKPG-DTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARF 219 (435)
T ss_dssp HHHHHHHHHHHHHHHTCSCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC----
T ss_pred HHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCc
Confidence 799999999999999999988 5799999999999999999999999999999999999999999999999999864345
Q ss_pred HH---HHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEE
Q 023801 81 KG---AVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKL 157 (277)
Q Consensus 81 ~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~v 157 (277)
++ ..+.+++++++.++.++++||+|+.|+..||.++++||++|++..+|+||+|+|+|||++|++.++++..|++||
T Consensus 220 d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrV 299 (435)
T 1jbq_A 220 DSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRI 299 (435)
T ss_dssp ---CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEE
T ss_pred chHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEE
Confidence 43 467788888887778899999999888899999999999999767999999999999999999999999999999
Q ss_pred EEEecCCCCccC-----CCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHH
Q 023801 158 YGIEPTESPVLS-----GGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 232 (277)
Q Consensus 158 igV~~~~~~~~~-----~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~ 232 (277)
|+|||.+++.+. .+....+.+++++.+.++..+....+|+++.|+|+|++++++.|++++||++||+||++++++
T Consensus 300 igVep~gs~~~~~~~l~~~~~~~~~~~gig~~~~~~~l~~~~vd~~~~Vsd~ea~~a~r~La~~eGilve~ssgaalaaa 379 (435)
T 1jbq_A 300 IGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVA 379 (435)
T ss_dssp EEEEETTCSCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHH
T ss_pred EEEecCCchhhchhhhhcCCCcceeecccccCccchhhhhhhccceEEeCHHHHHHHHHHHHHHcCCEEcHHHHHHHHHH
Confidence 999999986442 122334557788876666666678899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCeEEEEecCCCCCCcchhccHHHHHhhhc
Q 023801 233 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAES 272 (277)
Q Consensus 233 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~~ 272 (277)
++++++. .++++||+|+|++|.||++++++++|..+.+.
T Consensus 380 ~~~~~~~-~~g~~VV~iltd~g~ky~~~~~~~~w~~~~~~ 418 (435)
T 1jbq_A 380 VKAAQEL-QEGQRCVVILPDSVRNYMTKFLSDRWMLQKGF 418 (435)
T ss_dssp HHHGGGC-CTTCEEEEEECBBGGGGTTTTTCHHHHHHTTC
T ss_pred HHHHHHc-CCCCeEEEEEcCCcccccchhhccHHHHhcCC
Confidence 9987763 36889999999999999999999999876543
No 13
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=1.1e-54 Score=381.43 Aligned_cols=255 Identities=53% Similarity=0.809 Sum_probs=233.2
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.+++++|.++++ ||++|+||||+|+|++|+++|++|+||||+++++.|+++++.+||+|+.+++..+|
T Consensus 47 K~R~a~~~l~~a~~~g~~~~~---vv~aSsGN~g~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 123 (303)
T 1o58_A 47 KDRPALFMILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGM 123 (303)
T ss_dssp THHHHHHHHHHHHHTTCCTTC---EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC---EEEECchHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCH
Confidence 899999999999999987765 99999999999999999999999999999999999999999999999999864348
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCC-cEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPN-IKLYG 159 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~-~~vig 159 (277)
+++.+.+++++++. +++|++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++++.+|. +|||+
T Consensus 124 ~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vig 202 (303)
T 1o58_A 124 KGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVA 202 (303)
T ss_dssp HHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEE
T ss_pred HHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEE
Confidence 89999999998887 67889999999987679999999999999666999999999999999999999999899 99999
Q ss_pred EecCCCCccCCCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcC
Q 023801 160 IEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRP 239 (277)
Q Consensus 160 V~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~ 239 (277)
|||++++.+..+++..+.+++++.+..|+.+...++|+++.|+|+|++++++.|++++|+++||+||+++++++++.++.
T Consensus 203 ve~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~ 282 (303)
T 1o58_A 203 VEPAKSPVLSGGQPGKHAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALKVAQKL 282 (303)
T ss_dssp EEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHTS
T ss_pred EecCCCccccCCCCCCeecCcCCCCCcCHHHHHHhCCeEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHc
Confidence 99999988876666667788888776777787888999999999999999999999999999999999999999987753
Q ss_pred CCCCCeEEEEecCCCCCCcch
Q 023801 240 ENAGKLIVVIFPSFGERYLSS 260 (277)
Q Consensus 240 ~~~~~~vv~i~~~gG~~~~~~ 260 (277)
.++++||+|+|++|.||+|+
T Consensus 283 -~~~~~vv~i~tg~g~ky~~~ 302 (303)
T 1o58_A 283 -GPDARVVTVAPDHAERYLSI 302 (303)
T ss_dssp -CTTCCEEEEECBBGGGCTTT
T ss_pred -CCCCEEEEEECCCCcccccC
Confidence 36789999999999999986
No 14
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=5.4e-53 Score=396.50 Aligned_cols=269 Identities=36% Similarity=0.596 Sum_probs=242.6
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.+++++|.++|| ++||++|+||||+|+|++|+++|++|+||||+.++..|+.+++.|||+|+.++...+|
T Consensus 93 K~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~ 171 (527)
T 3pc3_A 93 KDRIGYRMVQDAEEQGLLKPG-YTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAY 171 (527)
T ss_dssp THHHHHHHHHHHHHHTCCCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCT
T ss_pred HHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCc
Confidence 899999999999999999998 5799999999999999999999999999999999999999999999999999864344
Q ss_pred H---HHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEE
Q 023801 81 K---GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKL 157 (277)
Q Consensus 81 ~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~v 157 (277)
+ .+.+.+.+++++.++.+|++||+||.|+..||.|+++||++|+++.||+||+|+|+||+++|++.++++..|+++|
T Consensus 172 ~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~v 251 (527)
T 3pc3_A 172 DSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQI 251 (527)
T ss_dssp TSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEE
T ss_pred ccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEE
Confidence 4 3677888998888788899999999888899999999999999768999999999999999999999999999999
Q ss_pred EEEecCCCCccC-----CCCCCCcccCccCCCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHH
Q 023801 158 YGIEPTESPVLS-----GGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 232 (277)
Q Consensus 158 igV~~~~~~~~~-----~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~ 232 (277)
|||||++++.+. ...+..+.++|++.+..|..++..++|+++.|+|+|++++++.|+++|||++||+||++++++
T Consensus 252 igve~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~p~~~~~~~~d~~~~V~d~e~~~a~r~l~~~eGi~~~pssa~alaaa 331 (527)
T 3pc3_A 252 VGVDPYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAA 331 (527)
T ss_dssp EEEEETTCCCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECGGGTHHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred EEEecCCcccccchhhcCCCCCceeccccCCCCCCcccchhhCcEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHH
Confidence 999999997542 123344567899888778888888999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCeEEEEecCCCCCCcchhccHHHHHhhh
Q 023801 233 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAE 271 (277)
Q Consensus 233 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~ 271 (277)
++++++. .++++||+|++++|.+|+++.++++|.....
T Consensus 332 l~~~~~~-~~~~~vv~i~~d~g~ryls~~~~~~~l~~rg 369 (527)
T 3pc3_A 332 LEHARKL-KKGQRCVVILPDGIRNYMTKFVSDNWMEARN 369 (527)
T ss_dssp HHHHTTC-CTTCEEEEEECBBGGGGTTTTTSHHHHHHTT
T ss_pred HHHHHHc-CCCCeEEEEEcCcchhhHhhhhcHHHHHhcC
Confidence 9987753 3788999999999999999999998876543
No 15
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=2.3e-51 Score=366.24 Aligned_cols=253 Identities=21% Similarity=0.307 Sum_probs=214.7
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.+++++|.+.+. ++||++|+||||+|+|++|+++|++|+||||+++++.|+++++.|||+|+.+++ ++
T Consensus 56 K~Rga~~~i~~a~~~g~~~~~-~~vv~~SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~--~~ 132 (346)
T 3l6b_A 56 KIRGALNAVRSLVPDALERKP-KAVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEP--SD 132 (346)
T ss_dssp HHHHHHHHHHTTC-----CCC-SCEEEECSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECS--SH
T ss_pred HHHHHHHHHHHHHHhccccCC-CEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC--CH
Confidence 799999999999998765444 569999999999999999999999999999999999999999999999999986 67
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++. +++|++|++||.+ +.||.|+++||++|+ +.||+||+|+|+|||++|++.++|+.+|++|||+|
T Consensus 133 ~~~~~~a~~l~~~~-~~~~i~~~~np~~-~~g~~t~~~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigV 209 (346)
T 3l6b_A 133 ESRENVAKRVTEET-EGIMVHPNQEPAV-IAGQGTIALEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAA 209 (346)
T ss_dssp HHHHHHHHHHHHHH-TCEECCSSSCHHH-HHHHHHHHHHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHHHHhc-CCEEECCCCChHH-HHHHHHHHHHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 88999999998887 6899999999987 899999999999999 68999999999999999999999999999999999
Q ss_pred ecCCCCccC----CCCC------CCcccCccCCC--CCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHH
Q 023801 161 EPTESPVLS----GGKP------GPHKIQGIGAG--FVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGA 228 (277)
Q Consensus 161 ~~~~~~~~~----~~~~------~~~~~~gl~~~--~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~a 228 (277)
||++++++. .+++ ..+..+++... ...+.+..+++|+++.|+|+|++++++.|++++|+++||+||++
T Consensus 210 e~~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~g~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~a 289 (346)
T 3l6b_A 210 EPSNADDCYQSKLKGKLMPNLYPPETIADGVKSSIGLNTWPIIRDLVDDIFTVTEDEIKCATQLVWERMKLLIEPTAGVG 289 (346)
T ss_dssp EEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCSCCCTTHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred ecCCCHHHHHHHHcCCccccCCCCCchhhhccCCCcHHHHHHHHHcCCeEEEECHHHHHHHHHHHHHHCCcEEcHHHHHH
Confidence 999987542 2221 13345565532 12234556789999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-CCCCeEEEEecCCCCCCcch
Q 023801 229 AAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSS 260 (277)
Q Consensus 229 laa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~ 260 (277)
++++++...+.. .++++||+|+ |||++|+++
T Consensus 290 laa~~~~~~~~~~~~~~~Vv~i~-sGG~~d~~~ 321 (346)
T 3l6b_A 290 VAAVLSQHFQTVSPEVKNICIVL-SGGNVDLTS 321 (346)
T ss_dssp HHHHHSGGGGGSCTTCCEEEEEE-CBCCCCTTG
T ss_pred HHHHHHhhhhhccCCCCeEEEEc-CCCCCCHHH
Confidence 999986543332 3678888888 899999997
No 16
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=1.9e-49 Score=356.04 Aligned_cols=259 Identities=18% Similarity=0.165 Sum_probs=221.3
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.++.++|. ++||++|+||||+|+|++|+++|++|+||||++++..|+++++.|||+|+.+++ +|
T Consensus 77 K~Rga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~ 149 (364)
T 4h27_A 77 KIRGIGHFCKRWAKQGC-----AHFVCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGE--LL 149 (364)
T ss_dssp HHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECS--ST
T ss_pred HHHHHHHHHHHHHhcCC-----CEEEEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECC--CH
Confidence 79999999999999876 679999999999999999999999999999999999999999999999999985 67
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC-CCcEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYG 159 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~-~~~~vig 159 (277)
+++.+.+++++++.++++|++||+||.+ +.||.|+++||++|+++.||+||+|+|+||+++|++.++|+.+ |+++||+
T Consensus 150 ~~a~~~a~~l~~~~~~~~~~~~~~np~~-~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vig 228 (364)
T 4h27_A 150 DEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIA 228 (364)
T ss_dssp THHHHHHHHHHHHSTTEEEECSSCSHHH-HHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHHHHHHhCCCeEEeCCCCCHHH-HHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEE
Confidence 8999999999998778999999999988 7899999999999996679999999999999999999999886 7899999
Q ss_pred EecCCCCccC----CCCC-----CCcccCccCCCCCc---cCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHH
Q 023801 160 IEPTESPVLS----GGKP-----GPHKIQGIGAGFVP---GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGG 227 (277)
Q Consensus 160 V~~~~~~~~~----~~~~-----~~~~~~gl~~~~~~---~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~ 227 (277)
|||++++++. .+++ ..+.+++|+.+..+ +.+..++.+..+.|+|+|++++++.|++++|+++||+||+
T Consensus 229 Ve~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~eps~aa 308 (364)
T 4h27_A 229 METFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGAQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGA 308 (364)
T ss_dssp EEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHTTSCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_pred EecCCChHHHHHHHCCCcccCCCCCcHHHHhCCCCCcHHHHHHHHhcCCEEEEECHHHHHHHHHHHHHHCCCeEcccHHH
Confidence 9999998653 2222 23445677665432 2334566777889999999999999999999999999999
Q ss_pred HHHHHH-----HHHhcCCCC--CCeEEEEecCCC-CCCcchhccHHHHHhh
Q 023801 228 AAAAAI-----EIAKRPENA--GKLIVVIFPSFG-ERYLSSVLFESVRKEA 270 (277)
Q Consensus 228 alaa~~-----~~~~~~~~~--~~~vv~i~~~gG-~~~~~~~~~~~~~~~~ 270 (277)
++++++ ++.+++..+ +++||+|+ ||| +.+++ .+..|.+..
T Consensus 309 alaa~~~~k~~~l~~~g~~~~~~~~Vv~v~-tGG~~~d~~--~l~~~~~~~ 356 (364)
T 4h27_A 309 ALAAVYSHVIQKLQLEGNLRTPLPSLVVIV-CGGSNISLA--QLRALKEQL 356 (364)
T ss_dssp HHHHHHTTHHHHHHHTTSSCSSCCEEEEEE-CBCSSCCHH--HHHHHHHHT
T ss_pred HHHHHHhhhhHHhhhccCcCCCCCeEEEEE-CCCCCCCHH--HHHHHHHHh
Confidence 999985 566666543 58999999 555 46665 566665554
No 17
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=4.6e-49 Score=354.30 Aligned_cols=260 Identities=17% Similarity=0.153 Sum_probs=220.6
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.++|.++.++|. ++||++|+||||+|+|++|+++|++|+||||+++++.|+++++.|||+|+.+++ +|
T Consensus 77 KdRga~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~ 149 (372)
T 1p5j_A 77 KIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGE--LL 149 (372)
T ss_dssp THHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--CH
T ss_pred HHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECC--CH
Confidence 89999999999998764 689999999999999999999999999999999999999999999999999986 78
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC-CCcEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYG 159 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~-~~~~vig 159 (277)
+++.+.+++++++.++++|++||+||.+ +.||.|+++||++|++..||+||+|+|+||+++|++.++++.+ |.+|||+
T Consensus 150 ~~a~~~a~~l~~~~~~~~~v~~~~n~~~-~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vig 228 (372)
T 1p5j_A 150 DEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIA 228 (372)
T ss_dssp HHHHHHHHHHHHHSTTEEECCSSCCHHH-HHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHHHHHHhcCCcEEeCCCCCHHH-HhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEE
Confidence 9999999999988668999999999988 7899999999999996669999999999999999999999986 8899999
Q ss_pred EecCCCCccC----CCCC-----CCcccCccCCCCCc---cCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHH
Q 023801 160 IEPTESPVLS----GGKP-----GPHKIQGIGAGFVP---GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGG 227 (277)
Q Consensus 160 V~~~~~~~~~----~~~~-----~~~~~~gl~~~~~~---~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~ 227 (277)
|||++++++. .+++ ..+.+++|+.+..+ +.+...+.++++.|+|+|++++++.|++++|+++||+||+
T Consensus 229 Ve~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~epssa~ 308 (372)
T 1p5j_A 229 METFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGSQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGA 308 (372)
T ss_dssp EEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHHHTCCCCCHHHHH
T ss_pred EecCCChHHHHHHHcCCceecCCCceeecccCCCCCCHHHHHHHhhcCCEEEEECHHHHHHHHHHHHHHcCCeechhHHH
Confidence 9999987653 1222 13456677765433 2234556788999999999999999999999999999999
Q ss_pred HHHHHHH-----HHhcCC--CCCCeEEEEecCCCCCCcchhccHHHHHhh
Q 023801 228 AAAAAIE-----IAKRPE--NAGKLIVVIFPSFGERYLSSVLFESVRKEA 270 (277)
Q Consensus 228 alaa~~~-----~~~~~~--~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~ 270 (277)
+++++++ +.+++. .++++||+|+|+|++ +|...|++|....
T Consensus 309 alaa~~~~~~~~l~~~g~~~~~~~~Vv~i~tgg~~--~~~~~~~~~~~~~ 356 (372)
T 1p5j_A 309 ALAAVYSHVIQKLQLEGNLRTPLPSLVVIVCGGSN--ISLAQLRALKEQL 356 (372)
T ss_dssp HHHHHHTTHHHHHHHTTSSCSSCSCEEEECCBCSS--CCHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCC--CCHHHHHHHHHHh
Confidence 9999874 333442 367899999955543 5555777776654
No 18
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-49 Score=347.55 Aligned_cols=258 Identities=22% Similarity=0.172 Sum_probs=217.8
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.++|.+++++|. ++||++||||||+|+|++|+++|++|+||||+++++.|+++++.+||+|+.+++ +|
T Consensus 38 K~R~a~~~l~~a~~~g~-----~~vv~~ssGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~--~~ 110 (318)
T 2rkb_A 38 KIRGIGHFCQEMAKKGC-----RHLVCSSGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGK--VW 110 (318)
T ss_dssp THHHHHHHHHHHHHTTC-----CEEEECCCSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SH
T ss_pred HHHHHHHHHHHHHHcCC-----CEEEEECCchHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHhcCCEEEEECC--CH
Confidence 89999999999999874 689999999999999999999999999999999999999999999999999985 68
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC-CCcEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYG 159 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~-~~~~vig 159 (277)
+++.+.+++++++. +++|++||+||.+ +.||.|+++||++|++..||+||+|+|+||+++|++.++++.+ |.+|||+
T Consensus 111 ~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ 188 (318)
T 2rkb_A 111 DEANLRAQELAKRD-GWENVPPFDHPLI-WKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIA 188 (318)
T ss_dssp HHHHHHHHHHHHST-TEEECCSSCSHHH-HHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEE
T ss_pred HHHHHHHHHHHHhc-CCEEeCCCCChhh-ccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEE
Confidence 89999999998875 7899999999988 7899999999999996679999999999999999999999886 8899999
Q ss_pred EecCCCCccC----CCCC-----CCcccCccCCCCCc---cCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHH
Q 023801 160 IEPTESPVLS----GGKP-----GPHKIQGIGAGFVP---GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGG 227 (277)
Q Consensus 160 V~~~~~~~~~----~~~~-----~~~~~~gl~~~~~~---~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~ 227 (277)
|||++++++. .+++ ..+.+++++.+..+ +.+...+.++++.|+|+|++++++.|++++|+++||+||+
T Consensus 189 ve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~ 268 (318)
T 2rkb_A 189 METHGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVAARALECMQVCKIHSEVVEDTEAVSAVQQLLDDERMLVEPACGA 268 (318)
T ss_dssp EEETTBCHHHHHHHHTSCCBCSCCCSSCGGGCCSBCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHHHHCBCCCHHHHH
T ss_pred EecCCChHHHHHHHcCCcccCCCCCceecccCCCCCCHHHHHHHHHcCCEEEEECHHHHHHHHHHHHHhcCcEEchhHHH
Confidence 9999987552 2221 13456677765443 2233456788999999999999999999999999999999
Q ss_pred HHHHHHH-----HHhcCC--CCCCeEEEEecCCCCCCcchhccHHHHHh
Q 023801 228 AAAAAIE-----IAKRPE--NAGKLIVVIFPSFGERYLSSVLFESVRKE 269 (277)
Q Consensus 228 alaa~~~-----~~~~~~--~~~~~vv~i~~~gG~~~~~~~~~~~~~~~ 269 (277)
+++++++ +.+++. .++++||+|+|+|++.+++ .+.++.+.
T Consensus 269 a~aa~~~~~~~~~~~~g~~~~~~~~vv~i~tgg~~~~~~--~l~~~~~~ 315 (318)
T 2rkb_A 269 ALAAIYSGLLRRLQAEGCLPPSLTSVVVIVCGGNNINSR--ELQALKTH 315 (318)
T ss_dssp HHHHHHTSHHHHHHHTTSSCSSCSCEEEEECBCSSCCHH--HHHHHHHH
T ss_pred HHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCCCCHH--HHHHHHHH
Confidence 9999873 333442 3678999999555556666 55555544
No 19
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=1.3e-50 Score=361.12 Aligned_cols=255 Identities=20% Similarity=0.254 Sum_probs=217.9
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.++|.++++++. .++||++|+||||+|+|++|+++|++|+||||+++++.|+++++.|||+|+++++ ++
T Consensus 71 KdR~a~~~i~~a~~~~~----~~~vv~~ssGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~ 144 (342)
T 2gn0_A 71 KIRGAFNKLSSLTEAEK----RKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGD--NF 144 (342)
T ss_dssp HHHHHHHHHHHSCHHHH----HTCEEEECSSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHHSCEEEECCS--SH
T ss_pred HHHHHHHHHHHHHHhcC----CCEEEEECCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CH
Confidence 79999999999874322 1469999999999999999999999999999999999999999999999999986 58
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++. +++|++||+||.+ +.||.|+++||++|++ .||+||+|+|+|||++|++.++|+.+|.+|||+|
T Consensus 145 ~~~~~~a~~l~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~-~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 221 (342)
T 2gn0_A 145 NDTIAKVSEIVETE-GRIFIPPYDDPKV-IAGQGTIGLEIMEDLY-DVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGV 221 (342)
T ss_dssp HHHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHHHHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHHHHhc-CCEEeCCCCCHHH-HHHHHHHHHHHHHHcC-CCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEE
Confidence 89999999998876 7899999999988 7899999999999994 7999999999999999999999999999999999
Q ss_pred ecCCCCccC----CCCC-----CCcccCccCCCC---CccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHH
Q 023801 161 EPTESPVLS----GGKP-----GPHKIQGIGAGF---VPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGA 228 (277)
Q Consensus 161 ~~~~~~~~~----~~~~-----~~~~~~gl~~~~---~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~a 228 (277)
||++++++. .+++ ..+.++|++.+. .++.+..+++|+++.|+|+|++++++.|++++|+++||+||++
T Consensus 222 e~~~~~~~~~s~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~a 301 (342)
T 2gn0_A 222 QAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVITEGAGALA 301 (342)
T ss_dssp EETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCBCCCTGGGHH
T ss_pred EeCCChhHHHHHHcCCccccCCCCccccccCCCCccHHHHHHHHHcCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHH
Confidence 999987653 2222 245567777542 2344567789999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCeEEEEecCCCCCCcchhccHHHH
Q 023801 229 AAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVR 267 (277)
Q Consensus 229 laa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~ 267 (277)
+++++++.+.+..++++||+|+ +||+.+++ .|.+++
T Consensus 302 laa~~~~~~~~~~~~~~Vv~i~-tGg~~d~~--~~~~~~ 337 (342)
T 2gn0_A 302 CAALLSGKLDSHIQNRKTVSII-SGGNIDLS--RVSQIT 337 (342)
T ss_dssp HHHHHHTTTHHHHTTSEEEEEE-CBCCCCHH--HHHHHH
T ss_pred HHHHHHhhhhccCCCCEEEEEE-CCCCCCHH--HHHHHH
Confidence 9999987542123688999999 77886655 455444
No 20
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=2.6e-49 Score=354.08 Aligned_cols=252 Identities=18% Similarity=0.181 Sum_probs=218.9
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCC
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKG 79 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~ 79 (277)
|||++.++|.+++++|. ++||++|+||||+|+|++|+++|++|+||+|++ ++..|+++++.+||+|+.+++ +
T Consensus 61 KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~--~ 133 (351)
T 3aey_A 61 KDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEG--N 133 (351)
T ss_dssp THHHHHHHHHHHHHTTC-----SEEEESCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEES--C
T ss_pred HHHHHHHHHHHHHhcCC-----CEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECC--C
Confidence 89999999999998886 689999999999999999999999999999998 999999999999999999986 6
Q ss_pred hHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC------
Q 023801 80 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP------ 153 (277)
Q Consensus 80 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~------ 153 (277)
++++.+.+++++++. +++|+++ +||.+ +.||.|+++||++|++..||+||+|+|+||+++|++.++++.++
T Consensus 134 ~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~ 210 (351)
T 3aey_A 134 FDDALRLTQKLTEAF-PVALVNS-VNPHR-LEGQKTLAFEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKR 210 (351)
T ss_dssp HHHHHHHHHHHHHHS-SEEECST-TCHHH-HHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSS
T ss_pred HHHHHHHHHHHHHhc-CcEecCC-CCccc-eeeeeeHHHHHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCC
Confidence 889999999998887 5888887 88888 78999999999999976799999999999999999999998653
Q ss_pred CcEEEEEecCCCCccCCCCCC---CcccCccCCCCCc-cC----ccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccH
Q 023801 154 NIKLYGIEPTESPVLSGGKPG---PHKIQGIGAGFVP-GV----LEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISS 225 (277)
Q Consensus 154 ~~~vigV~~~~~~~~~~~~~~---~~~~~gl~~~~~~-~~----~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~s 225 (277)
.+||++|||.+++++..+++. .+.+++++.+... +. +..++.++++.|+|+|++++++.|++++|+++||+|
T Consensus 211 ~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epss 290 (351)
T 3aey_A 211 LPRMLGFQAAGAAPLVLGRPVERPETLATAIRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPAS 290 (351)
T ss_dssp CCEEEEEEEGGGCHHHHTSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHTCCCBCHHH
T ss_pred CCeEEEEecCCCChhhcCcccCCccchhHhhcCCCCCCHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCEEECchH
Confidence 689999999998766544332 2456777654321 11 234577899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CCCCeEEEEecCCCCCCcchhc
Q 023801 226 GGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSSVL 262 (277)
Q Consensus 226 g~alaa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~~~ 262 (277)
|+++++++++.+++. .++++||+|+|++|.||+++.+
T Consensus 291 a~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~~ 328 (351)
T 3aey_A 291 AAAMAGVFKLLREGRLEPESTVVLTLTGHGLKDPATAE 328 (351)
T ss_dssp HHHHHHHHHHHHTTCSCTTCEEEEEECBBGGGCHHHHC
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEECCCCCCCHHHHH
Confidence 999999999988654 3688999999778889988643
No 21
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=3.4e-49 Score=353.41 Aligned_cols=251 Identities=20% Similarity=0.180 Sum_probs=218.5
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCC
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKG 79 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~ 79 (277)
|||++.++|.+++++|. ++||++||||||+|+|++|+++|++|+||+|++ +++.|+++++.+||+|+.+++ +
T Consensus 63 KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~ 135 (352)
T 2zsj_A 63 KDRGMTLAISKAVEAGK-----RAVICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQG--T 135 (352)
T ss_dssp THHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESS--C
T ss_pred HHHHHHHHHHHHHhcCC-----CEEEEeCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECC--C
Confidence 89999999999999886 679999999999999999999999999999998 999999999999999999996 6
Q ss_pred hHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC------
Q 023801 80 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP------ 153 (277)
Q Consensus 80 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~------ 153 (277)
|+++.+.+++++++. +++|+++ +||.+ +.||.|+++||++|++..||+||+|+|+||+++|++.++++..+
T Consensus 136 ~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~ 212 (352)
T 2zsj_A 136 FDDALNIVRKIGENF-PVEIVNS-VNPYR-IEGQKTAAFEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITK 212 (352)
T ss_dssp HHHHHHHHHHHHHHS-SEEECST-TCTHH-HHHHTHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSS
T ss_pred HHHHHHHHHHHHHHc-CcEECCC-CCcch-hhhHhHHHHHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCC
Confidence 889999999998887 5888887 88888 78999999999999976699999999999999999999998643
Q ss_pred CcEEEEEecCCCCccCCCCCC---CcccCccCCCCCc-cC----ccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccH
Q 023801 154 NIKLYGIEPTESPVLSGGKPG---PHKIQGIGAGFVP-GV----LEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISS 225 (277)
Q Consensus 154 ~~~vigV~~~~~~~~~~~~~~---~~~~~gl~~~~~~-~~----~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~s 225 (277)
.+||++|||.+++++..+++. .+.+++++.+... +. +.+++.++++.|+|+|++++++.|++++|+++||+|
T Consensus 213 ~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epss 292 (352)
T 2zsj_A 213 LPRMMGWQAEGAAPIVKGYPIKNPQTIATAIKIGNPYSWKSALKAAQESGGKIDAVSDSEILYAYKLIASTEGVFCEPAS 292 (352)
T ss_dssp CCEEEEEEETTBCHHHHTSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred CCEEEEEecCCCcHHhcCCccCCCcchhHHhcCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCeeECchH
Confidence 689999999998766444331 2456777654321 11 234567899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CCCCeEEEEecCCCCCCcchh
Q 023801 226 GGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSSV 261 (277)
Q Consensus 226 g~alaa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~~ 261 (277)
|+++++++++++++. .++++||+|+|++|.||+++.
T Consensus 293 a~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~ 329 (352)
T 2zsj_A 293 AASVAGLIKLVREGFFKGGEVVTCTLTGNGLKDPDTA 329 (352)
T ss_dssp HHHHHHHHHHHHTTCCCSCCEEEEEECBBGGGCHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEeCCCCccChHHH
Confidence 999999999988654 368899999977888999864
No 22
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.8e-49 Score=354.74 Aligned_cols=252 Identities=19% Similarity=0.206 Sum_probs=218.7
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCC
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDPAKG 79 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~~~~~~~~~~~~Ga~v~~~~~~~~ 79 (277)
|||++.++|.+++++|. ++||++|+||||+|+|++|+++|++|+||||++ +++.|+++++.+||+|+.+++ +
T Consensus 69 KdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~ 141 (360)
T 2d1f_A 69 KDRGMTMAVTDALAHGQ-----RAVLCASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDG--N 141 (360)
T ss_dssp THHHHHHHHHHHHHTTC-----SEEEECCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSS--C
T ss_pred HHHHHHHHHHHHHHCCC-----CEEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECC--C
Confidence 89999999999998886 689999999999999999999999999999998 999999999999999999996 6
Q ss_pred hHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC------
Q 023801 80 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP------ 153 (277)
Q Consensus 80 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~------ 153 (277)
|+++.+.+++++++.++.+++++ +||.+ +.||.|+++||++|++..||+||+|+|+||+++|++.++++..+
T Consensus 142 ~~~~~~~a~~l~~~~~~~~~i~~-~n~~~-~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~ 219 (360)
T 2d1f_A 142 FDDCLELARKMAADFPTISLVNS-VNPVR-IEGQKTAAFEIVDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDK 219 (360)
T ss_dssp HHHHHHHHHHHHHHCTTEEECST-TCHHH-HHHHTHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSS
T ss_pred HHHHHHHHHHHHHhcCCeEEcCC-CChhh-hhhHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhcccccc
Confidence 88999999999988755888887 88888 78999999999999976799999999999999999999998643
Q ss_pred CcEEEEEecCCCCccCCCCCC---CcccCccCCCCCc-cC----ccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccH
Q 023801 154 NIKLYGIEPTESPVLSGGKPG---PHKIQGIGAGFVP-GV----LEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISS 225 (277)
Q Consensus 154 ~~~vigV~~~~~~~~~~~~~~---~~~~~gl~~~~~~-~~----~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~s 225 (277)
.+||++|||.+++++..+++. .+.+++++.+... +. +.+++.++++.|+|+|++++++.|++++|+++||+|
T Consensus 220 ~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~eGi~~epss 299 (360)
T 2d1f_A 220 LPRMLGTQAAGAAPLVLGEPVSHPETIATAIRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPAS 299 (360)
T ss_dssp CCEEEEEEEGGGCHHHHSSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred CceEEEEecCCCCHHhcCCccCCccchHHHhCCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhcCeeECchH
Confidence 689999999998776544331 2445777655321 11 234567899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CCCCeEEEEecCCCCCCcchh
Q 023801 226 GGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSSV 261 (277)
Q Consensus 226 g~alaa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~~ 261 (277)
|+++++++++.+++. .++++||+|+|++|.||++++
T Consensus 300 a~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~ 336 (360)
T 2d1f_A 300 AASIAGLLKAIDDGWVARGSTVVCTVTGNGLKDPDTA 336 (360)
T ss_dssp HHHHHHHHHHHHHTSSCTTCEEEEEECBBGGGCHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcCCHHHH
Confidence 999999999887654 368899999977888998864
No 23
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=8.7e-49 Score=359.50 Aligned_cols=263 Identities=19% Similarity=0.221 Sum_probs=221.9
Q ss_pred CChhHHHHHHH-----HHHcCCCCCCC----------------cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHH
Q 023801 1 MCRIGYSMISD-----AEAKGLITPGE----------------SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLE 59 (277)
Q Consensus 1 ~dR~a~~~v~~-----a~~~g~l~~g~----------------~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~ 59 (277)
|||+|.++|.. ++++|.++||. .+||++|+||||+|+|++|+++|++|+||||++++..
T Consensus 118 K~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~ 197 (442)
T 3ss7_X 118 KARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAW 197 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHH
T ss_pred HHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHH
Confidence 79999999986 88999999886 4899999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCC--------CCCEE
Q 023801 60 RRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG--------RIDAL 131 (277)
Q Consensus 60 ~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~--------~~d~i 131 (277)
|+.+++.|||+|+.+++ +|+++.+.+++++++.+++++++++ |+.+++.||.|+++||++|+.+ .||+|
T Consensus 198 k~~~~r~~GA~Vv~v~~--~~~~a~~~a~~~a~~~~~~~~i~~~-n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~V 274 (442)
T 3ss7_X 198 KKAKLRSHGVTVVEYEQ--DYGVAVEEGRKAAQSDPNCFFIDDE-NSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFV 274 (442)
T ss_dssp HHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHTCTTEEECCTT-TCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEE
T ss_pred HHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhCCCceeCCCC-ChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEE
Confidence 99999999999999996 7899999999999887678899885 5555589999999999999842 36699
Q ss_pred EEecCCchhHHHHHHHHhhc-CCCcEEEEEecCCCCccC----CCCC-----------CCcccCccCCCCC---ccCccc
Q 023801 132 VSGIGTGGTITGAGKFLKEK-NPNIKLYGIEPTESPVLS----GGKP-----------GPHKIQGIGAGFV---PGVLEV 192 (277)
Q Consensus 132 v~pvG~Gg~~aGi~~~~~~~-~~~~~vigV~~~~~~~~~----~~~~-----------~~~~~~gl~~~~~---~~~~~~ 192 (277)
|+|+|+||+++|++.++++. +++++||+|||.+++++. .+.+ ..+.++||+.+.. .+.+..
T Consensus 275 vvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~~~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~~~~~~~~~~ 354 (442)
T 3ss7_X 275 YLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAME 354 (442)
T ss_dssp EEECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTCCHHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBCCSSHHHHHG
T ss_pred EEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCchHHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCCchhHHHHHH
Confidence 99999999999999999987 799999999999998642 1221 2345567765432 233456
Q ss_pred cccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcC------C-CC----CCeEEEEecCCCCCCcchh
Q 023801 193 NIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRP------E-NA----GKLIVVIFPSFGERYLSSV 261 (277)
Q Consensus 193 ~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~------~-~~----~~~vv~i~~~gG~~~~~~~ 261 (277)
+++|+++.|+|+|++++++.|+++|||++||+||+++++++++++.. . .+ +++||+++|+||.++.+
T Consensus 355 ~~~d~~~~Vsd~e~~~a~~~L~~~eGi~~epssaaalAa~~~l~~~~~~~~~~~l~~~~~~~~~vv~i~TGG~~~~~~-- 432 (442)
T 3ss7_X 355 RLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEE-- 432 (442)
T ss_dssp GGCCEEEEECHHHHHHHHHHHHHHHCCCCCGGGGGGGGHHHHHHHCHHHHHHHTCCHHHHHTCEEEEEECBCTTCCHH--
T ss_pred hhCCeEEEECHHHHHHHHHHHHHHCCCeEcHHHHHHHHHHHHHHhchhhHHhcCCCcccCCCCeEEEEECCCCCCCHH--
Confidence 88999999999999999999999999999999999999999987631 1 11 68999999777776654
Q ss_pred ccHHHHH
Q 023801 262 LFESVRK 268 (277)
Q Consensus 262 ~~~~~~~ 268 (277)
.+..|+.
T Consensus 433 ~~~~~~~ 439 (442)
T 3ss7_X 433 EMNQYLA 439 (442)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4455543
No 24
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=4.6e-49 Score=348.72 Aligned_cols=252 Identities=20% Similarity=0.271 Sum_probs=214.0
Q ss_pred CChhHHHHHHHHHHc-CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCC
Q 023801 1 MCRIGYSMISDAEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKG 79 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~-g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~ 79 (277)
|||++.+++.++.++ +. ++||++|+||||+|+|++|+++|++|++|||+++++.|+++++.|||+|+++++ +
T Consensus 57 KdRga~~~i~~~~~~~~~-----~~vv~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~ 129 (323)
T 1v71_A 57 KFRGALNALSQLNEAQRK-----AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDR--Y 129 (323)
T ss_dssp HHHHHHHHHTTCCHHHHH-----HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECT--T
T ss_pred HHHHHHHHHHHHHHhcCC-----CeEEEeCCCcHHHHHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECC--C
Confidence 799999999876542 22 569999999999999999999999999999999999999999999999999986 4
Q ss_pred hHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEE
Q 023801 80 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYG 159 (277)
Q Consensus 80 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vig 159 (277)
++++.+.+++++++. +++|++||+||.+ +.||.|+++||++|++ .||+||+|+|+|||++|++.++|+.+|++|||+
T Consensus 130 ~~~~~~~a~~l~~~~-~~~~i~~~~n~~~-~~g~~t~~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vig 206 (323)
T 1v71_A 130 KDDREKMAKEISERE-GLTIIPPYDHPHV-LAGQGTAAKELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVYG 206 (323)
T ss_dssp TTCHHHHHHHHHHHH-TCBCCCSSSSHHH-HHHHTHHHHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHHhc-CCEecCCCCCcch-hhhHhHHHHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEE
Confidence 567788888888776 6788999999988 7899999999999994 799999999999999999999999999999999
Q ss_pred EecCCCCccC----CCCC-----CCcccCccCCCCC---ccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHH
Q 023801 160 IEPTESPVLS----GGKP-----GPHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGG 227 (277)
Q Consensus 160 V~~~~~~~~~----~~~~-----~~~~~~gl~~~~~---~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~ 227 (277)
|||.+++++. .+++ ..+.++|++.+.. ++.+.++++|+++.|+|+|++++++.|++++|+++||++|+
T Consensus 207 ve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~ 286 (323)
T 1v71_A 207 VEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTFSIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCL 286 (323)
T ss_dssp EEEGGGCHHHHHHHHTSCCCCCCCCCSCTTSCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGGGGH
T ss_pred EEeCCCchHHHHHHcCCceecCCCCcccccccCCCCcHHHHHHHHHhCCEEEEECHHHHHHHHHHHHHhcCeEEcHHHHH
Confidence 9999987542 1222 2345677765432 23455678999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEecCCCCCCcchhccHHHH
Q 023801 228 AAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVR 267 (277)
Q Consensus 228 alaa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~ 267 (277)
++++++++.++ .++++||+|+ +||+.+++ .|.+++
T Consensus 287 alaa~~~~~~~--~~~~~vv~i~-tGg~~~~~--~~~~~~ 321 (323)
T 1v71_A 287 SFAAARAMKEK--LKNKRIGIII-SGGNVDIE--RYAHFL 321 (323)
T ss_dssp HHHHHHHTGGG--GTTCEEEEEE-CBCCCCHH--HHHHHH
T ss_pred HHHHHHHhHHh--cCCCeEEEEe-CCCCCCHH--HHHHHH
Confidence 99999987664 3788999999 77885554 444443
No 25
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=8.2e-49 Score=362.29 Aligned_cols=249 Identities=22% Similarity=0.277 Sum_probs=216.8
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||+|.+++.++.+++. + ++||++|+||||+++|++|+++|++|+||||.+++..|+++++.+||+|+.+++ +|
T Consensus 62 KdRgA~n~i~~l~~~~~-~---~gVV~aSsGNhg~avA~aa~~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~~--~~ 135 (514)
T 1tdj_A 62 KLRGAYAMMAGLTEEQK-A---HGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGA--NF 135 (514)
T ss_dssp THHHHHHHHHTTTTSSC-S---SSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCS--SH
T ss_pred HHHHHHHHHHHHHHhcC-C---CEEEEECCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CH
Confidence 89999999999875432 2 459999999999999999999999999999999999999999999999999985 78
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++. +++|++||+||.+ ++||+|+++||++|++. +|+||+|+|+||+++|++.++|+.+|.+|||||
T Consensus 136 dda~~~a~ela~e~-g~~~v~pfdnp~~-iaGqgTig~EI~eQl~~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgV 212 (514)
T 1tdj_A 136 DEAKAKAIELSQQQ-GFTWVPPFDHPMV-IAGQGTLALELLQQDAH-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAV 212 (514)
T ss_dssp HHHHHHHHHHHHHH-CCEECCSSCCHHH-HHHHHHHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHhc-CCEeeCCCCCHHH-HHHHHHHHHHHHHHCCC-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEE
Confidence 99999999998886 7899999999998 79999999999999954 999999999999999999999999999999999
Q ss_pred ecCCCCccC----CCCC-----CCcccCccCCCCC---ccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHH
Q 023801 161 EPTESPVLS----GGKP-----GPHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGA 228 (277)
Q Consensus 161 ~~~~~~~~~----~~~~-----~~~~~~gl~~~~~---~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~a 228 (277)
||++++++. .+++ ..+.++|++...+ ++.+..+++|+++.|+|+|+.++++.|++++|+++||+||++
T Consensus 213 ep~~a~~l~~sl~~G~~~~l~~v~tiadGiav~~~g~~~~~l~~~~vd~~v~Vsd~ei~~ai~~L~~~~givvEPsgA~a 292 (514)
T 1tdj_A 213 EAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALA 292 (514)
T ss_dssp EETTTCHHHHHHHHTSCCCCSCCCSSSSTTCCSSCCCHHHHHHTTSCCEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHH
T ss_pred eccCChhHHHHHhcCCeeecCCccccccchhcCCCChHHHHHHHHhCCeEEEECHHHHHHHHHHHHHHcCeEEcHHHHHH
Confidence 999988764 2322 1234566665332 345678899999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCeEEEEecCCCCCCcc
Q 023801 229 AAAAIEIAKRPENAGKLIVVIFPSFGERYLS 259 (277)
Q Consensus 229 laa~~~~~~~~~~~~~~vv~i~~~gG~~~~~ 259 (277)
++++++++++...++++||+|+ |||+.+++
T Consensus 293 lAal~~~~~~~~~~g~~VV~I~-tGgn~d~~ 322 (514)
T 1tdj_A 293 LAGMKKYIALHNIRGERLAHIL-SGANVNFH 322 (514)
T ss_dssp HHHHHHHHHHHTCCSCEEEEEC-CCCCCCTT
T ss_pred HHHHHHHHHhcCCCCCeEEEEE-eCCCCCHH
Confidence 9999998765445788999999 67775555
No 26
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=4.7e-49 Score=353.95 Aligned_cols=258 Identities=24% Similarity=0.286 Sum_probs=222.8
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.++.+++. .++||++||||||+|+|++|+++|++|++|||++++..|+++++.+||+|+.+++ +|
T Consensus 91 KdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa~~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~~--~~ 164 (366)
T 3iau_A 91 KLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAGQRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGK--TF 164 (366)
T ss_dssp THHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHHHHTTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SH
T ss_pred HHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHHHHhCCceEEEeCCCCCHHHHHHHHHCCCeEEEECc--CH
Confidence 89999999998754332 1469999999999999999999999999999999999999999999999999984 78
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+++.+.+++++++. +++|++||+||.+ +.||.|++.||++|+ +.||+||+|+|+||+++|++.++|..+|+++|++|
T Consensus 165 ~~~~~~a~~~~~~~-~~~~i~~~~n~~~-i~g~~t~~~Ei~~q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigV 241 (366)
T 3iau_A 165 DEAQTHALELSEKD-GLKYIPPFDDPGV-IKGQGTIGTEINRQL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGV 241 (366)
T ss_dssp HHHHHHHHHHHHHH-TCEECCSSSSHHH-HHHHHHHHHHHHHHC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEE
T ss_pred HHHHHHHHHHHHhc-CCEecCCCCChHH-HHHHHHHHHHHHHhc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEE
Confidence 99999999998886 7899999999988 799999999999999 78999999999999999999999999999999999
Q ss_pred ecCCCCccC----CCCC-----CCcccCccCCCCC---ccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHH
Q 023801 161 EPTESPVLS----GGKP-----GPHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGA 228 (277)
Q Consensus 161 ~~~~~~~~~----~~~~-----~~~~~~gl~~~~~---~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~a 228 (277)
+|.+++++. .+++ ..+..++++.+.. ++.+..+++++++.|+|+|++++++.|++++|+++||+||++
T Consensus 242 e~~~~~~l~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~sa~a 321 (366)
T 3iau_A 242 EPYGAASMTLSLHEGHRVKLSNVDTFADGVAVALVGEYTFAKCQELIDGMVLVANDGISAAIKDVYDEGRNILETSGAVA 321 (366)
T ss_dssp EEGGGCHHHHHHHHTSCCEESCCCCSSGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHSCCCCHHHHHH
T ss_pred eecCChHHHHHHHcCCCCcCCCccchhhhhcCCCCcHHHHHHHHhcCCCceeECHHHHHHHHHHHHHHcCcEEcHHHHHH
Confidence 999997653 1222 2234566664432 344567889999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCeEEEEecCCCCCCcchhccHHHHHhh
Q 023801 229 AAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEA 270 (277)
Q Consensus 229 laa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~ 270 (277)
+++++++++++..++++||+|+ |||+.+++ .+.++.+.+
T Consensus 322 laa~~~~~~~~~~~g~~Vv~i~-tGgn~d~~--~l~~~~~~~ 360 (366)
T 3iau_A 322 IAGAAAYCEFYKIKNENIVAIA-SGANMDFS--KLHKVTELA 360 (366)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEE-CBCCCCGG--GHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeEEEEe-CCCCCCHH--HHHHHHHhh
Confidence 9999999887766789999999 88885555 666665543
No 27
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=4.6e-49 Score=347.10 Aligned_cols=244 Identities=23% Similarity=0.298 Sum_probs=209.2
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM 80 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 80 (277)
|||++.+++.++. +. ++||++|+||||+|+|++|+++|++|+||||+++++.|+++++.|||+|+.+++ +|
T Consensus 51 KdR~a~~~i~~l~--~~-----~~vv~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~ 121 (311)
T 1ve5_A 51 KARGALSKALALE--NP-----KGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGV--TA 121 (311)
T ss_dssp HHHHHHHHHHHSS--SC-----CCEEEECSSHHHHHHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTC--CT
T ss_pred HHHHHHHHHHHhc--CC-----CeEEEECCCcHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CH
Confidence 7999999999876 22 469999999999999999999999999999999999999999999999999986 47
Q ss_pred HHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhC---CCCCEEEEecCCchhHHHHHHHHhhcCCCcEE
Q 023801 81 KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIKL 157 (277)
Q Consensus 81 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~---~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~v 157 (277)
+++.+.+++++++. +++|++||+||.+ +.||.|+++||++|+. +.||+||+|+|+||+++|++.++|+.+|.+||
T Consensus 122 ~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~v 199 (311)
T 1ve5_A 122 KNREEVARALQEET-GYALIHPFDDPLV-IAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLV 199 (311)
T ss_dssp TTHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHHHhc-CcEecCCCCCcch-hhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEE
Confidence 78888888888876 7899999999988 7899999999999995 57999999999999999999999999999999
Q ss_pred EEEecCCCCccC----CCCC------CCcccCccCCCC---CccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeecc
Q 023801 158 YGIEPTESPVLS----GGKP------GPHKIQGIGAGF---VPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGIS 224 (277)
Q Consensus 158 igV~~~~~~~~~----~~~~------~~~~~~gl~~~~---~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~ 224 (277)
|+|||++++++. .+++ ..+.++++..+. .++.+..+++++++.|+|+|++++++.|++++|+++||+
T Consensus 200 igve~~~~~~~~~~~~~g~~~~~~~~~~~i~~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps 279 (311)
T 1ve5_A 200 LGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRTLSLGERTFPILRERVDGILTVSEEALLEAERLLFTRTKQVVEPT 279 (311)
T ss_dssp EEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCCSSCCTTTHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCBCCCGG
T ss_pred EEEEeCCChHHHHHHHcCCccccCCCCCeeeCcCCCCCccHHHHHHHHhcCCEEEEECHHHHHHHHHHHHHhcCceEchH
Confidence 999999987542 2222 234456666432 233355678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEecCCCCCCcc
Q 023801 225 SGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLS 259 (277)
Q Consensus 225 sg~alaa~~~~~~~~~~~~~~vv~i~~~gG~~~~~ 259 (277)
||+++++++++.++ . +++||+|+ +||+.+++
T Consensus 280 sa~alaa~~~~~~~--~-~~~vv~i~-tgg~~d~~ 310 (311)
T 1ve5_A 280 GALPLAAVLEHGAR--L-PQTLALLL-SGGNRDFS 310 (311)
T ss_dssp GGHHHHHHHHHGGG--S-CSEEEEEE-CBCCCCCC
T ss_pred HHHHHHHHHhhhhc--c-CCEEEEEE-CCCCCCCC
Confidence 99999999998776 3 78999999 77875544
No 28
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=1.4e-48 Score=345.90 Aligned_cols=249 Identities=20% Similarity=0.198 Sum_probs=209.8
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEee--CCchHHHHHHHHHHHCCCeEEEEeCCCC-CHHHHHHHHHcCCEEEEeCCC
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEP--TSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA 77 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~a--SsGN~g~a~A~aa~~~Gl~~~vvvp~~~-~~~~~~~~~~~Ga~v~~~~~~ 77 (277)
|||.+.+++.+++++|. ++||++ |+||||+|+|++|+++|++|++|||+++ ++.|+.+++.|||+|+++++.
T Consensus 54 K~R~~~~~i~~a~~~G~-----~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~ 128 (325)
T 1j0a_A 54 KIRKLEYLLGDALSKGA-----DVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAK 128 (325)
T ss_dssp HHHHHHHHHHHHHHTTC-----SEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCC
T ss_pred HHHHHHHHHHHHHHcCC-----CEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcc
Confidence 79999999999999987 579997 9999999999999999999999999999 999999999999999999974
Q ss_pred CCh---HHHHHHHHHHHHhCCCeE-ecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC
Q 023801 78 KGM---KGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP 153 (277)
Q Consensus 78 ~~~---~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~ 153 (277)
.+. .++.+.+++++++.+..| +..++.||.+ ..||.|++.||++|++..||+||+|+|||||++|+++++++.+|
T Consensus 129 ~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~-~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~ 207 (325)
T 1j0a_A 129 DSFELMKYAEEIAEELKREGRKPYVIPPGGASPIG-TLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNE 207 (325)
T ss_dssp STTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHH-HTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTC
T ss_pred hhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHH-HHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCC
Confidence 332 256778888887764433 4456678877 67899999999999966899999999999999999999999999
Q ss_pred CcEEEEEecCCCCccCCCCC---CCcccCccC-CCCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCeeec-cHHHH
Q 023801 154 NIKLYGIEPTESPVLSGGKP---GPHKIQGIG-AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGI-SSGGA 228 (277)
Q Consensus 154 ~~~vigV~~~~~~~~~~~~~---~~~~~~gl~-~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p-~sg~a 228 (277)
++|||+|||.+++.+..... .+....+++ .+..++.+..+++|+ +.|+|+|++++++.|++++||++|| |||++
T Consensus 208 ~~~vigVe~~~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~-~~v~d~e~~~a~~~l~~~~gi~~ep~ssa~a 286 (325)
T 1j0a_A 208 DIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVRPELYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPVYTGKA 286 (325)
T ss_dssp CCEEEEEECSSCSSSHHHHHHHHHHHHHHHTTCCCCSCCEEEECSTTS-TTCCCHHHHHHHHHHHHHHSCCCCTTTHHHH
T ss_pred CceEEEEEecCchHHHHHHHHHHHHHHHHhcCCCCCCCcEEecCcccC-CCCCCHHHHHHHHHHHHhhCcccccchHHHH
Confidence 99999999999976542110 011122343 234577788889999 9999999999999999999999999 59999
Q ss_pred HHHHHHHHhcCCCCCCeEEEEecCCCCCCc
Q 023801 229 AAAAIEIAKRPENAGKLIVVIFPSFGERYL 258 (277)
Q Consensus 229 laa~~~~~~~~~~~~~~vv~i~~~gG~~~~ 258 (277)
+++++++++++.. +++||+|+ |||+..+
T Consensus 287 ~aa~~~~~~~~~~-~~~Vv~i~-tGG~~~~ 314 (325)
T 1j0a_A 287 FYGLVDLARKGEL-GEKILFIH-TGGISGT 314 (325)
T ss_dssp HHHHHHHHHTTCS-CSEEEEEE-CCCHHHH
T ss_pred HHHHHHHHHcCCC-CCcEEEEE-CCCchhh
Confidence 9999999887654 88999998 8888443
No 29
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=3.9e-48 Score=351.59 Aligned_cols=262 Identities=19% Similarity=0.200 Sum_probs=216.5
Q ss_pred CChhHHHHHHHHHH--cCC----C--------CCCCc-EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH
Q 023801 1 MCRIGYSMISDAEA--KGL----I--------TPGES-VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR 65 (277)
Q Consensus 1 ~dR~a~~~v~~a~~--~g~----l--------~~g~~-~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~ 65 (277)
|||++.++|.++++ .|. + .+ .+ +||++|+||||+|+|++|+++|++|+||||+++++.|+++++
T Consensus 77 K~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~-~~~~vv~aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~ 155 (398)
T 4d9i_A 77 XMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIG-EKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAIL 155 (398)
T ss_dssp THHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCS-CCCEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHhhcccccccchhhhhhhcc-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHH
Confidence 89999999999953 331 1 12 25 799999999999999999999999999999999999999999
Q ss_pred HcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC-----CC-CCcchhhhhhchHHHHHhhhCCC---CCEEEEecC
Q 023801 66 AFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ-----FE-NPANPKIHYETTGPELWKGSGGR---IDALVSGIG 136 (277)
Q Consensus 66 ~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~-~~~~~~~g~~t~~~Ei~~Q~~~~---~d~iv~pvG 136 (277)
.|||+|+.+++ +|+++.+.+++++++. +++|++| |+ ||.+.+.||.|+++||++|++.. ||+||+|+|
T Consensus 156 ~~GA~Vv~v~~--~~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG 232 (398)
T 4d9i_A 156 NLGAECIVTDM--NYDDTVRLTMQHAQQH-GWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAG 232 (398)
T ss_dssp TTTCEEEECSS--CHHHHHHHHHHHHHHH-TCEECCSSCBTTBCHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECS
T ss_pred HcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEEecCcccCCcCCCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecC
Confidence 99999999996 7899999999998887 7899986 65 35556899999999999999544 999999999
Q ss_pred CchhHHHHHHHHhhc--CCCcEEEEEecCCCCccC----CCCCC------CcccCccCCCCC---ccCccccccCeEEEe
Q 023801 137 TGGTITGAGKFLKEK--NPNIKLYGIEPTESPVLS----GGKPG------PHKIQGIGAGFV---PGVLEVNIIDEVVQV 201 (277)
Q Consensus 137 ~Gg~~aGi~~~~~~~--~~~~~vigV~~~~~~~~~----~~~~~------~~~~~gl~~~~~---~~~~~~~~~~~~~~v 201 (277)
+||+++|++.++++. .+.++||+|||++++++. .+++. .+..++++.+.. .+.+..+++|+++.|
T Consensus 233 ~GG~~aGi~~~~k~~~~~~~~~vigVep~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~p~~~~~~~~~~~~d~~~~V 312 (398)
T 4d9i_A 233 VGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISC 312 (398)
T ss_dssp SSHHHHHHHHHHHHHHCTTSCEEEEEEETTSCHHHHHHHHTSCCCC------CCTTCCCSSCCHHHHHHHHHHCCEEEEE
T ss_pred ccHHHHHHHHHHHHhcCCCCCEEEEEEeCCCchHHHHHHcCCceecCCCCCceeccccCCCCCHHHHHHHHHcCCeEEEE
Confidence 999999999999876 478999999999998764 23322 234456654321 233446789999999
Q ss_pred CHHHHHHHHHHHHHHcC----CeeeccHHHHHHHHHHHH---------hcCC-CCCCeEEEEecCCCCCCcchhccHHHH
Q 023801 202 SSDEAIETAKLLALKEG----LFVGISSGGAAAAAIEIA---------KRPE-NAGKLIVVIFPSFGERYLSSVLFESVR 267 (277)
Q Consensus 202 ~d~e~~~a~~~l~~~~g----i~~~p~sg~alaa~~~~~---------~~~~-~~~~~vv~i~~~gG~~~~~~~~~~~~~ 267 (277)
+|+|++++++.|+++|| |++||+||++++++++++ +++. .++++||+|+ |||+++++ .|.+++
T Consensus 313 ~d~e~~~a~~~l~~~eG~~~~i~~epssa~alaa~~~~~~~~~~~~l~~~~~~~~~~~Vv~i~-tGG~~d~~--~~~~~~ 389 (398)
T 4d9i_A 313 QDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVIS-TEGDTDVK--HYREVV 389 (398)
T ss_dssp CTHHHHHHHHHHHSCSTTCCCCCCCHHHHHHHHHHHHHHHSTTHHHHHHHTTCCTTCEEEEEE-CBCCSSHH--HHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCcEEECchHHHHHHHHHHhhhhhhhHHHHHhcCCCCCCEEEEEe-CCCCCCHH--HHHHHH
Confidence 99999999999999999 999999999999999884 3443 4688999999 78998776 566665
Q ss_pred Hh
Q 023801 268 KE 269 (277)
Q Consensus 268 ~~ 269 (277)
..
T Consensus 390 ~~ 391 (398)
T 4d9i_A 390 WE 391 (398)
T ss_dssp TT
T ss_pred hc
Confidence 43
No 30
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=5.4e-49 Score=350.79 Aligned_cols=252 Identities=15% Similarity=0.107 Sum_probs=212.5
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEe--eCCchHHHHHHHHHHHCCCeEEEEeCCCCC-----H------HHHHHHHHc
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIE--PTSGNTGIGLAFMAAAKQYRLIITMPASMS-----L------ERRIILRAF 67 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~--aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-----~------~~~~~~~~~ 67 (277)
|||++.++|.+++++|. ++||+ +|+||||+|+|++|+++|++|++|||+.++ + .|+.+++.|
T Consensus 51 K~R~a~~~l~~a~~~g~-----~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~ 125 (341)
T 1f2d_A 51 KLRKLEYIVPDIVEGDY-----THLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIM 125 (341)
T ss_dssp HHHHHTTTHHHHHHSCC-----SEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCC-----CEEEEcCCcchHHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhC
Confidence 79999999999999887 67999 999999999999999999999999999887 3 499999999
Q ss_pred CCEEEEeCCCCCh---HHHHHHHHHHHHhCCC-eEecCC-CCCCcchhhhhhchHHHHHhhhC---CCCCEEEEecCCch
Q 023801 68 GAELVLTDPAKGM---KGAVQKAEEILAKTPN-AYMLQQ-FENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGG 139 (277)
Q Consensus 68 Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~-~~~~~~-~~~~~~~~~g~~t~~~Ei~~Q~~---~~~d~iv~pvG~Gg 139 (277)
||+|+++++..+. +.+.+.+++++++.+. +++.++ |+||.+ +.||.|++.||++|++ ..||+||+|+||||
T Consensus 126 GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~i~~~~~~np~~-~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGg 204 (341)
T 1f2d_A 126 GADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYG-GLGFVGFADEVINQEVELGIKFDKIVVCCVTGS 204 (341)
T ss_dssp TCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEEEECGGGTTSTTT-TTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSH
T ss_pred CCEEEEeCCccchhHHHHHHHHHHHHHhcCCcEEEeCCCcCCCCcc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCchH
Confidence 9999999864322 2567778888887653 445678 999999 6799999999999995 47999999999999
Q ss_pred hHHHHHHHHhhcCCCcEEEEEecCCCCccCCCCC---CCcccCccCCCC--CccCccccccCeEEEeCHHHHHHHHHHHH
Q 023801 140 TITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKP---GPHKIQGIGAGF--VPGVLEVNIIDEVVQVSSDEAIETAKLLA 214 (277)
Q Consensus 140 ~~aGi~~~~~~~~~~~~vigV~~~~~~~~~~~~~---~~~~~~gl~~~~--~~~~~~~~~~~~~~~v~d~e~~~a~~~l~ 214 (277)
|++|++.++++.+|++|||+|||.+++.+...+. ..+.+++++.+. .++.+..+++|+++.|+|+|++++++.|+
T Consensus 205 t~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~ 284 (341)
T 1f2d_A 205 TTAGILAGMAQYGRQDDVIAIDASFTSEKTKEQTLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCA 284 (341)
T ss_dssp HHHHHHHHHGGGTCGGGEEEEECSSCHHHHHHHHHHHHHHHHHHHTCCCCCSCCCEECTTSTTBTTBCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHHcCCCCCcCeEEEecCcccceEecCCHHHHHHHHHHH
Confidence 9999999999999999999999999976532111 112234555332 34467788899999999999999999999
Q ss_pred HHcCCeeec-cHHHHHHHHHHHHhcCCC-CCCeEEEEecCCCCCCcc
Q 023801 215 LKEGLFVGI-SSGGAAAAAIEIAKRPEN-AGKLIVVIFPSFGERYLS 259 (277)
Q Consensus 215 ~~~gi~~~p-~sg~alaa~~~~~~~~~~-~~~~vv~i~~~gG~~~~~ 259 (277)
+++||++|| |||+++++++++++++.. ++++||+|+ |||+..+.
T Consensus 285 ~~egi~~ep~~sa~alaa~~~~~~~~~~~~~~~Vv~i~-tGG~~~~~ 330 (341)
T 1f2d_A 285 EQEGVLTDPVYEGKSMQGLIALIKEDYFKPGANVLYVH-LGGAPALS 330 (341)
T ss_dssp HHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCEEEEEE-CCCGGGGG
T ss_pred HHcCCccccchHHHHHHHHHHHHHhCCCCCCCeEEEEE-CCchHHhh
Confidence 999999999 699999999999887653 788999998 89985544
No 31
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=1.6e-47 Score=345.02 Aligned_cols=253 Identities=23% Similarity=0.312 Sum_probs=213.8
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE-EeCCCCC
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV-LTDPAKG 79 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~-~~~~~~~ 79 (277)
|||++.+++..+. +.+++| ++|+++|+||||+|+|++|+++|++|+||||+.++..|+.+|+.+||+|+ .++. .+
T Consensus 127 K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~AlA~aaa~~Gl~~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~-~~ 202 (389)
T 1wkv_A 127 KDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEA-PS 202 (389)
T ss_dssp THHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTC-SS
T ss_pred HHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEEcCC-CC
Confidence 8999999999965 555666 67999999999999999999999999999999999999999999999999 7773 36
Q ss_pred hHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhC---CCCCEEEEecCCchhHHHHHHHHhhcCCCcE
Q 023801 80 MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLKEKNPNIK 156 (277)
Q Consensus 80 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~---~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~ 156 (277)
++++.+.+.+++++. +++|++||+||.+++.||++++.||++|+. ..||+||+|+|+||+++|++.+|++..|.+|
T Consensus 203 ~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~~~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vr 281 (389)
T 1wkv_A 203 TVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIR 281 (389)
T ss_dssp SGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCe
Confidence 788888888887775 789999999998888999999999999994 3699999999999999999999999899999
Q ss_pred EEEEecCCCCccCCCCCCCcccCccCCCCCccCccccccC-eEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHH
Q 023801 157 LYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIID-EVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEI 235 (277)
Q Consensus 157 vigV~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~-~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~ 235 (277)
||+|||.+++.+.+ .. .+.. .+..+....+| +++.|+|+|++++++.|+++|||+++|+||+++++++++
T Consensus 282 vigVe~~~~~~l~G----i~---~i~~--~~~~~~~~~~dg~~~~Vsd~ea~~a~~~l~~~eGi~~~pssa~alaa~~~l 352 (389)
T 1wkv_A 282 AVLVQPAQGDSIPG----IR---RVET--GMLWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKK 352 (389)
T ss_dssp EEEEEECTTCCCTT----CC---CGGG--CCSHHHHSCCCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHH
T ss_pred EEEEecCCCCcccc----cc---ccCC--cchhhhhheeccEEEEECHHHHHHHHHHHHHHcCCeEChHHHHHHHHHHHH
Confidence 99999998865532 11 1111 12222334566 899999999999999999999999999999999999999
Q ss_pred HhcCCCCCCeEEEEecCCCCCCcchhccHHHHHh
Q 023801 236 AKRPENAGKLIVVIFPSFGERYLSSVLFESVRKE 269 (277)
Q Consensus 236 ~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~ 269 (277)
++++..+++++|+++|++|+||++++ .++...
T Consensus 353 ~~~g~~~~~~vVviltg~G~k~~~~~--~~~~~~ 384 (389)
T 1wkv_A 353 AAEGDLEPGDYVVVVPDTGFKYLSLV--QNALEG 384 (389)
T ss_dssp HHTTCSCSEEEEEEECBBGGGCHHHH--HHHHC-
T ss_pred HHhcCCCCCCEEEEEcCCCccCHHHH--HHHHHh
Confidence 88765445668889989999999963 344443
No 32
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=3.5e-48 Score=345.44 Aligned_cols=251 Identities=19% Similarity=0.177 Sum_probs=209.7
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeC--CchHHHHHHHHHHHCCCeEEEEeCCCCCH--------HHHHHHHHcCCE
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPT--SGNTGIGLAFMAAAKQYRLIITMPASMSL--------ERRIILRAFGAE 70 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aS--sGN~g~a~A~aa~~~Gl~~~vvvp~~~~~--------~~~~~~~~~Ga~ 70 (277)
|||.+.+++.+++++|. ++||++| +||||+|+|++|+++|++|+||||++++. .|+.+++.|||+
T Consensus 65 K~R~~~~~l~~a~~~G~-----~~vv~~s~tsGN~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~ 139 (342)
T 4d9b_A 65 KLRKLEFLVADALREGA-----DTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQ 139 (342)
T ss_dssp HHHHHHHHHHHHHHTTC-----CEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCE
T ss_pred HHHhHHHHHHHHHHcCC-----CEEEEcCCcccHHHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCE
Confidence 79999999999999987 6799996 79999999999999999999999998873 599999999999
Q ss_pred EEEeCCCCChHHHH-HHHHHHHHhCCCeEecCCC--CCCcchhhhhhchHHHHHhhhC--CCCCEEEEecCCchhHHHHH
Q 023801 71 LVLTDPAKGMKGAV-QKAEEILAKTPNAYMLQQF--ENPANPKIHYETTGPELWKGSG--GRIDALVSGIGTGGTITGAG 145 (277)
Q Consensus 71 v~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~~--~~~~~~~~g~~t~~~Ei~~Q~~--~~~d~iv~pvG~Gg~~aGi~ 145 (277)
|+++++..+++++. +.++++.++.+ ..|+.++ .||.+ ..||.|+++||++|++ ..||+||+|+|+|||++|++
T Consensus 140 V~~~~~~~~~~~~~~~~a~~l~~~~~-~~~~~p~~~~n~~~-~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~ 217 (342)
T 4d9b_A 140 IEMCDALTDPDAQLQTLATRIEAQGF-RPYVIPVGGSSALG-AMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLA 217 (342)
T ss_dssp EEECSCCSSHHHHHHHHHHHHHHTTC-CEEECCGGGCSHHH-HHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHH
T ss_pred EEEECchhhHHHHHHHHHHHHHhcCC-ceEEeCCCCCChHH-HHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHH
Confidence 99998754555555 45667766653 3444444 45555 6799999999999996 47999999999999999999
Q ss_pred HHHhhcCCCcEEEEEecCCCCccCCCCC---CCcccCccCC-CCCccCccccccCeEEEeCHHHHHHHHHHHHHHcCCee
Q 023801 146 KFLKEKNPNIKLYGIEPTESPVLSGGKP---GPHKIQGIGA-GFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFV 221 (277)
Q Consensus 146 ~~~~~~~~~~~vigV~~~~~~~~~~~~~---~~~~~~gl~~-~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ 221 (277)
.++++.+|++|||+|||.+++.+..... ..+.+++|+. +..++.+..+++|+++.|+|+|++++++.|++++||++
T Consensus 218 ~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~ 297 (342)
T 4d9b_A 218 VGLEHLMPDVELIGVTVSRSVAEQKPKVIALQQAIAGQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLASLEGVLL 297 (342)
T ss_dssp HHHHHHCTTSEEEEEESSSCHHHHHHHHHHHHHHHHHHTTCCCCCCCEEECTTSTTCTTCCCHHHHHHHHHHHHHHSCCC
T ss_pred HHHHhhCCCCeEEEEEecCcHHHHHHHHHHHHHHHHHHcCCCCccceEEEecCCCceEecCCHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999975532111 1233456765 45677788899999999999999999999999999999
Q ss_pred ecc-HHHHHHHHHHHHhcCCC-CCCeEEEEecCCCCCCcc
Q 023801 222 GIS-SGGAAAAAIEIAKRPEN-AGKLIVVIFPSFGERYLS 259 (277)
Q Consensus 222 ~p~-sg~alaa~~~~~~~~~~-~~~~vv~i~~~gG~~~~~ 259 (277)
||+ ||+++++++++++++.. ++++||+|+ |||+..+.
T Consensus 298 epsYsa~a~aa~~~~~~~~~~~~~~~Vv~i~-tGGn~~~~ 336 (342)
T 4d9b_A 298 DPVYTGKAMAGLIDGISQKRFNDDGPILFIH-TGGAPALF 336 (342)
T ss_dssp CTTTHHHHHHHHHHHHHHTCSSSSSCEEEEE-CCCTTHHH
T ss_pred cccHHHHHHHHHHHHHHcCCCCCCCeEEEEE-CCCccchh
Confidence 996 99999999999887653 788999999 99995443
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=3.1e-47 Score=339.15 Aligned_cols=252 Identities=17% Similarity=0.199 Sum_probs=205.9
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEe--eCCchHHHHHHHHHHHCCCeEEEEeCCCCCHH--------HHHHHHHcCCE
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIE--PTSGNTGIGLAFMAAAKQYRLIITMPASMSLE--------RRIILRAFGAE 70 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~--aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~--------~~~~~~~~Ga~ 70 (277)
|||++.++|.+++++|. ++||+ +|+||||+|+|++|+++|++|++|||++++.. |+++++.|||+
T Consensus 51 K~R~a~~~l~~a~~~g~-----~~vv~~GassGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~ 125 (338)
T 1tzj_A 51 KTRKLEYLIPEALAQGC-----DTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGAD 125 (338)
T ss_dssp HHHHHHTTHHHHHHTTC-----CEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHcCC-----CEEEEcCCchhHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCE
Confidence 79999999999999886 57898 89999999999999999999999999988764 99999999999
Q ss_pred EEEeCCCCChH---HHHHHHHHHHHhCCCeEec-CC-CCCCcchhhhhhchHHHHHhhhC---CCCCEEEEecCCchhHH
Q 023801 71 LVLTDPAKGMK---GAVQKAEEILAKTPNAYML-QQ-FENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTIT 142 (277)
Q Consensus 71 v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~-~~-~~~~~~~~~g~~t~~~Ei~~Q~~---~~~d~iv~pvG~Gg~~a 142 (277)
|+.+++..+.. .+.+.+++++++.+..+++ ++ |+||.+ +.||.|+++||++|+. ..||+||+|+|+|||++
T Consensus 126 V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~ 204 (338)
T 1tzj_A 126 VRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLG-GLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQA 204 (338)
T ss_dssp EEECCC-------CHHHHHHHHHHHTTCCEEECCGGGTSSTTT-TTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHH
T ss_pred EEEeCCcchhhHHHHHHHHHHHHHhcCCceEEeCCCcCCCccc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHH
Confidence 99998632211 2466777887776444543 45 899998 7899999999999994 47999999999999999
Q ss_pred HHHHHHhhc-CCCcEEEEEecCCCCccCCCCC---CCcccCccCCCC----CccCccccccCeEEEeCHHHHHHHHHHHH
Q 023801 143 GAGKFLKEK-NPNIKLYGIEPTESPVLSGGKP---GPHKIQGIGAGF----VPGVLEVNIIDEVVQVSSDEAIETAKLLA 214 (277)
Q Consensus 143 Gi~~~~~~~-~~~~~vigV~~~~~~~~~~~~~---~~~~~~gl~~~~----~~~~~~~~~~~~~~~v~d~e~~~a~~~l~ 214 (277)
|+++++++. .|. |||+|||.+++.+..... ..+..++++.+. ..+.+..+++++++.|+|+|++++++.|+
T Consensus 205 Gi~~~~k~~g~~~-~vigve~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~ 283 (338)
T 1tzj_A 205 GMVVGFAADGRAD-RVIGVDASAKPAQTREQITRIARQTAEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCA 283 (338)
T ss_dssp HHHHHHHTTTCGG-GEEEEECSSCHHHHHHHHHHHHHHHHHHHTCSSCCCGGGCEEECTTSCSBTTBCCHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCC-eEEEEEccCchHHHHHHHHHHHHHHHHHcCCCCCCCcccEEEecCcccceeecCCHHHHHHHHHHH
Confidence 999999998 788 999999999865432111 112223333221 23345677889999999999999999999
Q ss_pred HHcCCeeec-cHHHHHHHHHHHHhcCCC-CCCeEEEEecCCCCCCcch
Q 023801 215 LKEGLFVGI-SSGGAAAAAIEIAKRPEN-AGKLIVVIFPSFGERYLSS 260 (277)
Q Consensus 215 ~~~gi~~~p-~sg~alaa~~~~~~~~~~-~~~~vv~i~~~gG~~~~~~ 260 (277)
+++||++|| |||+++++++++++++.. ++++||+|+ |||++|++.
T Consensus 284 ~~~gi~~ep~ysa~alaa~~~~~~~~~~~~~~~Vv~i~-tGG~~~~~~ 330 (338)
T 1tzj_A 284 RTEGMLTDPVYEGKSMHGMIEMVRNGEFPEGSRVLYAH-LGGVPALNG 330 (338)
T ss_dssp HHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCEEEEEE-CCCGGGGGG
T ss_pred HhcCCccccchHHHHHHHHHHHHHcCCCCCCCeEEEEE-CCCcccccc
Confidence 999999999 599999999999887653 788999998 899988874
No 34
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=1.5e-43 Score=327.92 Aligned_cols=251 Identities=18% Similarity=0.170 Sum_probs=203.5
Q ss_pred CChhHHHHHHHHHH---cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-CCHHHHHHHHHcCCEEEEeCC
Q 023801 1 MCRIGYSMISDAEA---KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 1 ~dR~a~~~v~~a~~---~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
|||++.+++..+.+ +|+ +.++||++||||||+|+|++|+++|++|+||+|++ ++..|+.+++.+||+|+.+++
T Consensus 163 KDRga~~~~~~l~~~~~~~~---g~~~Vv~aSsGNtG~AlA~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g 239 (486)
T 1e5x_A 163 KDLGMTVLVSQVNRLRKMKR---PVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT 239 (486)
T ss_dssp THHHHHHHHHHHHHHHHTTC---CCCEEEECCCSHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHcCC---CCeEEEEcCCCHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECC
Confidence 89999888877654 432 23679999999999999999999999999999996 999999999999999999996
Q ss_pred CCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCC-CCCEEEEecCCchhHHHHHHHHhhcC---
Q 023801 77 AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG-RIDALVSGIGTGGTITGAGKFLKEKN--- 152 (277)
Q Consensus 77 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~-~~d~iv~pvG~Gg~~aGi~~~~~~~~--- 152 (277)
+|+++.+.+++++++. ++++++++ ||.+ +.||.|+++||++|+++ .||+||+|+|+||+++|++.+|++..
T Consensus 240 --~~dd~~~~a~~l~~~~-~~~~vns~-N~~~-i~gq~t~~~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~G 314 (486)
T 1e5x_A 240 --DFDGCMKLIREITAEL-PIYLANSL-NSLR-LEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELG 314 (486)
T ss_dssp --CHHHHHHHHHHHHHHS-CEEEGGGS-HHHH-HHHHTHHHHHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTT
T ss_pred --CHHHHHHHHHHHHhcC-CEEEeCCC-CHHH-HHHHHHHHHHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhc
Confidence 6899999999998887 68888887 7887 78999999999999964 59999999999999999999998764
Q ss_pred ---CCcEEEEEecCCCCccC----CCC----C---CCcccCccCCCCCccCc--cccccCe----EEEeCHHHHHHHHHH
Q 023801 153 ---PNIKLYGIEPTESPVLS----GGK----P---GPHKIQGIGAGFVPGVL--EVNIIDE----VVQVSSDEAIETAKL 212 (277)
Q Consensus 153 ---~~~~vigV~~~~~~~~~----~~~----~---~~~~~~gl~~~~~~~~~--~~~~~~~----~~~v~d~e~~~a~~~ 212 (277)
|.+||++||+++++++. .++ + ..+.+++|+.+. |.++ ....+++ ++.|+|+|++++++
T Consensus 315 li~p~~rvi~Ve~~~~~~l~~~~~~G~~~~~~~~~~~t~a~gi~i~~-p~~~~~~~~~~~~~~g~~~~Vsd~e~~~ai~- 392 (486)
T 1e5x_A 315 LVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGD-PVSIDRAVYALKKCNGIVEEATEEELMDAMA- 392 (486)
T ss_dssp SSSCCCEEEEEEETTSSTHHHHHHTTTTTCCC-----------------CCCHHHHHHHHHTTCEEEEECHHHHHHHHH-
T ss_pred cCCCCCEEEEEecCCCchHHHHHHcCCCccccCCCCCeeCccccCCC-CccHHHHHHHHhccCCeEEEECHHHHHHHHH-
Confidence 78999999999887653 231 1 234556665442 2222 1223444 99999999999999
Q ss_pred HHHHcCCeeeccHHHHHHHHHHHHhcCC-CCCCeEEEEecCCCCCCcchh
Q 023801 213 LALKEGLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSSV 261 (277)
Q Consensus 213 l~~~~gi~~~p~sg~alaa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~~ 261 (277)
+++++|+++||+||+++++++++++++. .++++||+++|++|.||.+++
T Consensus 393 l~~~eGi~~ePssA~alaa~~~~~~~g~~~~~~~vV~i~Tg~~~k~~~~v 442 (486)
T 1e5x_A 393 QADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVSTAHGLKFTQSK 442 (486)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHHHTTSSCTTCCEEEEECBCGGGGHHHH
T ss_pred HHHHCCeEEChhHHHHHHHHHHHHHhcCCCCCCeEEEEeCCCCccCHHHH
Confidence 7788999999999999999999988764 467899999989999998854
No 35
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-43 Score=322.13 Aligned_cols=255 Identities=20% Similarity=0.228 Sum_probs=196.1
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC---CHHHHHHHHHcCCEEEEeCC-
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVLTDP- 76 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~---~~~~~~~~~~~Ga~v~~~~~- 76 (277)
|||++.+++..+.++|+ ...|+++|+||||+|+|++|+++|++|+||||... +..|+.+++.|||+|+.++.
T Consensus 109 K~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~ 184 (418)
T 1x1q_A 109 KINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAG 184 (418)
T ss_dssp THHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECST
T ss_pred HHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHHcCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCC
Confidence 89999999999988886 13455699999999999999999999999999853 23678999999999999984
Q ss_pred CCChHHHHHHHHH-HHHhCCCeEec-CCCCCCc----chhhhhhchHHHHHhhhC----CCCCEEEEecCCchhHHHHHH
Q 023801 77 AKGMKGAVQKAEE-ILAKTPNAYML-QQFENPA----NPKIHYETTGPELWKGSG----GRIDALVSGIGTGGTITGAGK 146 (277)
Q Consensus 77 ~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~~~~----~~~~g~~t~~~Ei~~Q~~----~~~d~iv~pvG~Gg~~aGi~~ 146 (277)
..+++++.+.+.+ ++++.++.+|+ +++.|+. ++..||+|+++||++|+. ..||+||+|+|+||+++|++.
T Consensus 185 ~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~ 264 (418)
T 1x1q_A 185 SRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFA 264 (418)
T ss_dssp TSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHH
Confidence 3478888877754 45654455554 5544432 223599999999999983 359999999999999999999
Q ss_pred HHhhc-CCCcEEEEEecCCCCcc--------CCCCC--------------------CCcccCccCCCCC---ccCccccc
Q 023801 147 FLKEK-NPNIKLYGIEPTESPVL--------SGGKP--------------------GPHKIQGIGAGFV---PGVLEVNI 194 (277)
Q Consensus 147 ~~~~~-~~~~~vigV~~~~~~~~--------~~~~~--------------------~~~~~~gl~~~~~---~~~~~~~~ 194 (277)
++|++ .|.+|||||||.+++.. ..+.+ ..+..+|+..+.. .+.+....
T Consensus 265 ~~k~l~~p~~~vigVe~~g~~~~~~~~~~~l~~G~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~ 344 (418)
T 1x1q_A 265 PFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYDHDGQITPAHSVSAGLDYPGVGPEHSYYADAG 344 (418)
T ss_dssp HHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETTEEEEBCCC----------------CSBCCHHHHHHHHHT
T ss_pred HHHHhCCCCCeEEEEecCCcccccHHHHHHHHcCCeeeeccccccccccccccccCCceeeeccCCCCCCHHHHHHHhcc
Confidence 99987 78999999999997321 11211 1123345443211 12234456
Q ss_pred cCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCCCCCCeEEEEecCCCCCCcch
Q 023801 195 IDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSS 260 (277)
Q Consensus 195 ~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~ 260 (277)
+++++.|+|+|++++++.|+++|||+++|++|+++++++++.++. .++++||+++|++|+||+++
T Consensus 345 ~~~~~~Vsd~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~~~~~~-~~~~~Vv~vlsG~g~kd~~~ 409 (418)
T 1x1q_A 345 VAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAAKVVPEM-DKDQVVVINLSGRGDKDVTE 409 (418)
T ss_dssp SEEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHTTTS-CTTCEEEEEECBBGGGTHHH
T ss_pred CeEEEEECHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHhc-CCCCeEEEEECCCCCCCHHH
Confidence 789999999999999999999999999999999999999887653 36889999997778999885
No 36
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=1.4e-42 Score=314.55 Aligned_cols=253 Identities=21% Similarity=0.251 Sum_probs=199.6
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEE-eeCCchHHHHHHHHHHHCCCeEEEEeCCC-CC--HHHHHHHHHcCCEEEEeCC
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLI-EPTSGNTGIGLAFMAAAKQYRLIITMPAS-MS--LERRIILRAFGAELVLTDP 76 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv-~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~~--~~~~~~~~~~Ga~v~~~~~ 76 (277)
|||++.+++..+.++|. +++| ++||||||+|+|++|+++|++|+||||.. .+ ..|+.+++.|||+|+.++.
T Consensus 82 K~R~a~~~i~~a~~~g~-----~~vv~~~ssGN~g~a~A~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~ 156 (388)
T 1v8z_A 82 KTNNAIGQALLAKFMGK-----TRLIAETGAGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNS 156 (388)
T ss_dssp HHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHHHHHcCC-----CEEEEecCchHHHHHHHHHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECC
Confidence 79999999999988886 3455 58999999999999999999999999985 22 4678999999999999985
Q ss_pred -CCChHHHHHHHHH-HHHhCCCeEe-cCCCCCCcc----hhhhhhchHHHHHhhh----CCCCCEEEEecCCchhHHHHH
Q 023801 77 -AKGMKGAVQKAEE-ILAKTPNAYM-LQQFENPAN----PKIHYETTGPELWKGS----GGRIDALVSGIGTGGTITGAG 145 (277)
Q Consensus 77 -~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~~----~~~g~~t~~~Ei~~Q~----~~~~d~iv~pvG~Gg~~aGi~ 145 (277)
..+++++.+.+.+ ++++.++.+| ++++.|+.+ +..||+|+++||++|+ +..||+||+|+|+|||++|++
T Consensus 157 ~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~ 236 (388)
T 1v8z_A 157 GSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIF 236 (388)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhHHHHHhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHH
Confidence 3468888877754 5666545444 566655432 2348999999999999 446999999999999999999
Q ss_pred HHHhhcCCCcEEEEEecCCCCc--------cCCCCC--------------------CCcccCccCCCCC---ccCccccc
Q 023801 146 KFLKEKNPNIKLYGIEPTESPV--------LSGGKP--------------------GPHKIQGIGAGFV---PGVLEVNI 194 (277)
Q Consensus 146 ~~~~~~~~~~~vigV~~~~~~~--------~~~~~~--------------------~~~~~~gl~~~~~---~~~~~~~~ 194 (277)
.+++. .|.+|||+|||++++. +..+++ ..+.++++..... .+.+....
T Consensus 237 ~~~~~-~~~~~vigve~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~tia~gl~~~~~g~~~~~~~~~~ 315 (388)
T 1v8z_A 237 YPFVN-DKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQ 315 (388)
T ss_dssp GGGTT-CTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTT
T ss_pred HHHhh-CCCceEEEEccCccccchhhhhHHHhcCCceeccccccccccccccccCCCceeeeccccCCCChhHHHHHhcC
Confidence 99984 8899999999998642 111111 1223344443211 12344566
Q ss_pred cCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCCCCCCeEEEEecCCCCCCcch
Q 023801 195 IDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSS 260 (277)
Q Consensus 195 ~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~ 260 (277)
+++++.|+|+|++++++.|++++|++++|++|+++++++++.++. .++++||+|+|++|+||+++
T Consensus 316 ~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~l~~~~-~~~~~vv~i~tg~g~k~~~~ 380 (388)
T 1v8z_A 316 RAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEM-SRDEIIIVNLSGRGDKDLDI 380 (388)
T ss_dssp SEEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTS-CTTCEEEEEECBBSGGGHHH
T ss_pred CcEEEEECHHHHHHHHHHHHHhcCCeecccHHHHHHHHHHHHHhc-CCCCEEEEEECCCCccCHHH
Confidence 789999999999999999999999999999999999999988763 36889999998888999885
No 37
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=4.7e-43 Score=318.20 Aligned_cols=255 Identities=22% Similarity=0.248 Sum_probs=200.5
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEe-eCCchHHHHHHHHHHHCCCeEEEEeCCC-CCH--HHHHHHHHcCCEEEEeCC
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIE-PTSGNTGIGLAFMAAAKQYRLIITMPAS-MSL--ERRIILRAFGAELVLTDP 76 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~-aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~~~--~~~~~~~~~Ga~v~~~~~ 76 (277)
|||++.+++..+.++|+ +++|+ +||||||+|+|++|+++|++|+||||.. .+. .|+.+|+.+||+|+.++.
T Consensus 86 K~R~a~~~~~~a~~~g~-----~~vi~e~ssGNhg~a~A~aa~~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~ 160 (396)
T 1qop_B 86 KTNQVLGQALLAKRMGK-----SEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHS 160 (396)
T ss_dssp HHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHHHHHcCc-----CEEEEecCchHHHHHHHHHHHHCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECC
Confidence 79999999999998886 45666 8999999999999999999999999985 433 467899999999999984
Q ss_pred -CCChHHHHHHHHHH-HHhCCCeEe-cCCCCCCc----chhhhhhchHHHHHhhh----CCCCCEEEEecCCchhHHHHH
Q 023801 77 -AKGMKGAVQKAEEI-LAKTPNAYM-LQQFENPA----NPKIHYETTGPELWKGS----GGRIDALVSGIGTGGTITGAG 145 (277)
Q Consensus 77 -~~~~~~~~~~a~~~-~~~~~~~~~-~~~~~~~~----~~~~g~~t~~~Ei~~Q~----~~~~d~iv~pvG~Gg~~aGi~ 145 (277)
..+++++.+.+.+. +++.++.+| ++++.|+. ++..||+|++.||++|+ +..||+||+|+|+||+++|++
T Consensus 161 ~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~g~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~ 240 (396)
T 1qop_B 161 GSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMF 240 (396)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHH
Confidence 34788888877764 565545554 44544432 32348999999999999 457999999999999999999
Q ss_pred HHHhhcCCCcEEEEEecCCCCc--------cCCCCC--------------------CCcccCccCCCCC---ccCccccc
Q 023801 146 KFLKEKNPNIKLYGIEPTESPV--------LSGGKP--------------------GPHKIQGIGAGFV---PGVLEVNI 194 (277)
Q Consensus 146 ~~~~~~~~~~~vigV~~~~~~~--------~~~~~~--------------------~~~~~~gl~~~~~---~~~~~~~~ 194 (277)
.+++ ..|.+|||+|||.++.. +..+++ ..+.++|+..+.. .+.+....
T Consensus 241 ~~~~-~~~~~~vigVe~~~~~~~~~~~~~~l~~g~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~ 319 (396)
T 1qop_B 241 ADFI-NDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIG 319 (396)
T ss_dssp GGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTT
T ss_pred HHHh-cCCCCEEEEEeCCCccccchhhHHHHHcCCeeeeccchhhhcccccCCcCCCceeeccCCCCCCCHHHHHHHhcC
Confidence 9998 48899999999998641 111211 1233445543211 23344567
Q ss_pred cCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCCCCCCeEEEEecCCCCCCcchh
Q 023801 195 IDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSV 261 (277)
Q Consensus 195 ~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~ 261 (277)
+++++.|+|+|++++++.|+++|||+++|++|+++++++++.++...++++||+++|++|+||++++
T Consensus 320 ~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~l~~~~~~~~~~vv~i~tg~g~k~~~~~ 386 (396)
T 1qop_B 320 RADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTV 386 (396)
T ss_dssp SSEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGGGHHHH
T ss_pred CeEEEEECHHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHH
Confidence 8999999999999999999999999999999999999998876532267899999988889998853
No 38
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=1.3e-41 Score=310.20 Aligned_cols=255 Identities=22% Similarity=0.266 Sum_probs=188.2
Q ss_pred CChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC---HHHHHHHHHcCCEEEEeCC-
Q 023801 1 MCRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS---LERRIILRAFGAELVLTDP- 76 (277)
Q Consensus 1 ~dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~---~~~~~~~~~~Ga~v~~~~~- 76 (277)
|||++.+++..+.++|+ ...|+++|+||||+|+|++|+++|++|+||||.... ..|+.+|+.+||+|+.++.
T Consensus 113 K~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~ 188 (422)
T 2o2e_A 113 KINNVLGQALLARRMGK----TRVIAETGAGQHGVATATACALLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTG 188 (422)
T ss_dssp HHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECST
T ss_pred HHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHHHHcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCC
Confidence 79999999999998886 134557999999999999999999999999998532 4678899999999999984
Q ss_pred CCChHHHHHHHHH-HHHhCCCeEe-cCCCCCC--c--chhhhhhchHHHHHhhh----CCCCCEEEEecCCchhHHHHHH
Q 023801 77 AKGMKGAVQKAEE-ILAKTPNAYM-LQQFENP--A--NPKIHYETTGPELWKGS----GGRIDALVSGIGTGGTITGAGK 146 (277)
Q Consensus 77 ~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~--~--~~~~g~~t~~~Ei~~Q~----~~~~d~iv~pvG~Gg~~aGi~~ 146 (277)
..+++++.+.+.+ ++++.++.+| ++++.++ . ++..||++++.||++|+ +..||+||+|+|+||+++|++.
T Consensus 189 ~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~ 268 (422)
T 2o2e_A 189 SKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFH 268 (422)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHHTTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSG
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHH
Confidence 3478888877754 5566445555 4444432 2 32458999999999997 3459999999999999999988
Q ss_pred HHhhcCCCcEEEEEecCCCC--------ccCCCCCC--------------------CcccCccCCCC---CccCcccccc
Q 023801 147 FLKEKNPNIKLYGIEPTESP--------VLSGGKPG--------------------PHKIQGIGAGF---VPGVLEVNII 195 (277)
Q Consensus 147 ~~~~~~~~~~vigV~~~~~~--------~~~~~~~~--------------------~~~~~gl~~~~---~~~~~~~~~~ 195 (277)
+++. .|.+|||||||.++. ++..+++. .+..+||..+. ..+.+....+
T Consensus 269 ~~~~-~p~v~vigVe~~g~~~~~~~~~~~l~~g~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~ 347 (422)
T 2o2e_A 269 AFLD-DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHGSFSYLLQDEDGQTIESHSISAGLDYPGVGPEHAWLKEAGR 347 (422)
T ss_dssp GGTT-CTTCEEEEEEECC-------------------------------------------------------------C
T ss_pred HHhc-CCCCeEEEEecCCCcccchhHHHHHHcCCceeccccchhhcccccccccCCceeecccCCCCCCHHHHHHHHhCC
Confidence 8864 789999999999862 22222221 12233443211 1233455667
Q ss_pred CeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCCCCCCeEEEEecCCCCCCcchh
Q 023801 196 DEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSV 261 (277)
Q Consensus 196 ~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~ 261 (277)
++++.|+|+|++++++.|+++|||+++++++++++++++++++. .++++||+++|++|+||++++
T Consensus 348 ~~~~~Vsd~e~~~a~~~l~~~eGi~~~~esa~A~a~a~~l~~~~-~~~~~vvvilsG~g~kd~~~~ 412 (422)
T 2o2e_A 348 VDYRPITDSEAMDAFGLLCRMEGIIPAIESAHAVAGALKLGVEL-GRGAVIVVNLSGRGDKDVETA 412 (422)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-CTTCEEEEECCSCSSSHHHHH
T ss_pred eeEEEECHHHHHHHHHHHHHHcCCccCchHHHHHHHHHHHHHhc-CCCCEEEEEeCCCCCCCHHHH
Confidence 89999999999999999999999999999999999999887653 367899999988899998853
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=2.7e-39 Score=295.54 Aligned_cols=245 Identities=13% Similarity=0.065 Sum_probs=194.9
Q ss_pred CChhHHHHH---HHHHHcCCCCCCCcEEEeeCCchHHHHHH-HHHHHCCCeEEEEeCC-CCCHHHHHHHHHcCCEE--EE
Q 023801 1 MCRIGYSMI---SDAEAKGLITPGESVLIEPTSGNTGIGLA-FMAAAKQYRLIITMPA-SMSLERRIILRAFGAEL--VL 73 (277)
Q Consensus 1 ~dR~a~~~v---~~a~~~g~l~~g~~~vv~aSsGN~g~a~A-~aa~~~Gl~~~vvvp~-~~~~~~~~~~~~~Ga~v--~~ 73 (277)
|||++.+++ .++ +++ +..+|+++||||||+|+| ++|+++|++|+||+|+ .+++.|+++|+.+||+| +.
T Consensus 107 Kdr~a~~l~~~l~~a-~~~----~~~~Iv~atsGNtG~A~A~~~a~~~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~ 181 (428)
T 1vb3_A 107 KDFGGRFMAQMLTHI-AGD----KPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVA 181 (428)
T ss_dssp HHHHHHHHHHHHHHH-TTT----CCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEE
T ss_pred HHHHHHHHHHHHHHH-Hhc----CCCEEEecCCchHHHHHHHHHhhhcCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEE
Confidence 799998884 445 233 236899999999999999 5999999999999999 59999999999999999 66
Q ss_pred eCCCCChHHHHHHHHHHHHh-----CCCeEecCCCCCCcchhhhhhchHHHHHhhhCC---CCCEEEEecCCchhHHHHH
Q 023801 74 TDPAKGMKGAVQKAEEILAK-----TPNAYMLQQFENPANPKIHYETTGPELWKGSGG---RIDALVSGIGTGGTITGAG 145 (277)
Q Consensus 74 ~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~---~~d~iv~pvG~Gg~~aGi~ 145 (277)
+++ +++++.+.++++.++ ..++++++++ ||.+ +.||.++++||++|+.+ .||+||+|+|+||+++|++
T Consensus 182 v~g--~~d~~~~~~~~~~~d~~~~~~~~~~~~n~~-n~~~-~~gq~t~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~ 257 (428)
T 1vb3_A 182 IDG--DFDACQALVKQAFDDEELKVALGLNSANSI-NISR-LLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGL 257 (428)
T ss_dssp EES--CHHHHHHHHHHGGGCHHHHHHHTEECCSTT-SHHH-HHHTTHHHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHH
T ss_pred eCC--CHHHHHHHHHHHHhchhhhhhcCeeeCCCC-CHHH-HHHHHHHHHHHHHHcccccCCCCEEEEeCCchHHHHHHH
Confidence 664 788888888777642 1256677764 6766 78999999999999964 5999999999999999999
Q ss_pred HHHhhcCCCcEEEEEecCCCCcc----CCCCC-----CCcccCccCCCCCccCc------cccc-----cCeEEEeCHHH
Q 023801 146 KFLKEKNPNIKLYGIEPTESPVL----SGGKP-----GPHKIQGIGAGFVPGVL------EVNI-----IDEVVQVSSDE 205 (277)
Q Consensus 146 ~~~~~~~~~~~vigV~~~~~~~~----~~~~~-----~~~~~~gl~~~~~~~~~------~~~~-----~~~~~~v~d~e 205 (277)
.+++...|.+|||+|++.++ .+ ..+.. ..+..++++.+ .|.++ .... .++++.|+|+|
T Consensus 258 ~a~~~g~p~~kii~a~~~~~-~l~~~~~~G~~~~~~~~~tis~g~~i~-~p~~~~~~~~l~~~~~~~~~~~~~~~Vsd~e 335 (428)
T 1vb3_A 258 LAKSLGLPVKRFIAATNVND-TVPRFLHDGQWSPKATQATLSNAMDVS-QPNNWPRVEELFRRKIWQLKELGYAAVDDET 335 (428)
T ss_dssp HHHHTTCCCSEEEEEECSCC-HHHHHHHHSCCCCCCCCCCSSGGGCCS-SCTTHHHHHHHHHHTTCCGGGSEEEECCHHH
T ss_pred HHHHcCCCCCeEEeecCCCh-HHHHHHHcCCcccCCCCCcccchhcCC-CCccHHHHHHHHhcchhhhhCcEEEEECHHH
Confidence 99988778889999997763 33 12222 22334555433 12222 1222 67899999999
Q ss_pred HHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCCCCCCeEEEEecCCCCCCcchh
Q 023801 206 AIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSV 261 (277)
Q Consensus 206 ~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~ 261 (277)
++++++.| +++|+++||+||+++++++++.+ +++++|+++|++|.||++++
T Consensus 336 ~~~a~~~l-~~eGi~~~p~sa~a~aa~~~~~~----~~~~vV~i~tg~~~K~~~~v 386 (428)
T 1vb3_A 336 TQQTMREL-KELGYTSEPHAAVAYRALRDQLN----PGEYGLFLGTAHPAKFKESV 386 (428)
T ss_dssp HHHHHHHH-HHTTCCCCHHHHHHHHHHHTTCC----TTCEEEEEECBCGGGGHHHH
T ss_pred HHHHHHHH-HHCCeEECchHHHHHHHHHHHhC----CCCcEEEEeCCCCCCCHHHH
Confidence 99999999 99999999999999999987643 56899999988999998864
No 40
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=7.1e-35 Score=267.03 Aligned_cols=245 Identities=14% Similarity=0.108 Sum_probs=189.4
Q ss_pred CChhHHHH---HHHHH-HcCCCCCCCcEEEeeCCchHHH-HHHHHHHHCCCeEEEEeCCC-CCHHHHHHHHHcC-CEE--
Q 023801 1 MCRIGYSM---ISDAE-AKGLITPGESVLIEPTSGNTGI-GLAFMAAAKQYRLIITMPAS-MSLERRIILRAFG-AEL-- 71 (277)
Q Consensus 1 ~dR~a~~~---v~~a~-~~g~l~~g~~~vv~aSsGN~g~-a~A~aa~~~Gl~~~vvvp~~-~~~~~~~~~~~~G-a~v-- 71 (277)
|||++.++ +.+++ ++|. ..+|+++||||||. ++|++|+++|++++||+|++ +++.|+.+|+.+| ++|
T Consensus 117 KDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~gganV~v 192 (468)
T 4f4f_A 117 KDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRDNTDIFILFPNGRVSPVQQRQMTSSGFSNVHA 192 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCSSEEEEEEEETTCSCHHHHHHHHCSCCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhccCCcEEEEeCCCCCCHHHHHHHHhcCCCeEEE
Confidence 79999999 77775 5554 14799999999995 55777999999999999998 9999999999997 465
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCC-----CeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCE---EEEecCCchhHHH
Q 023801 72 VLTDPAKGMKGAVQKAEEILAKTP-----NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDA---LVSGIGTGGTITG 143 (277)
Q Consensus 72 ~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~---iv~pvG~Gg~~aG 143 (277)
+.+++ +|+++.+.+++++++.+ +++++++ .||.. +.||+|+++||++|++ .+|. |+||+|+||+++|
T Consensus 193 v~v~g--~fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~r-i~GQ~T~~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g 267 (468)
T 4f4f_A 193 LSIEG--NFDDCQNLVKGMFNDLEFCDALSLSGVNS-INWAR-IMPQVVYYFTAALSLG-APDRAVSFTVPTGNFGDIFA 267 (468)
T ss_dssp EEEES--CHHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHH-HGGGHHHHHHHHHHTT-TTSSCEEEEEECSSSHHHHH
T ss_pred eecCC--CHHHHHHHHHHHHhccccccccceEeCCC-CCHHH-HHhHHHHHHHHHHhcc-cCCCCeEEEEEeCCcHHHHH
Confidence 56664 79999999988876431 4666766 47776 8899999999999994 7898 9999999999999
Q ss_pred HHHHHhhcCCCcEEEEEecCCCCccC----CCCC-----CCcccCccCCCCCccCccc----------------------
Q 023801 144 AGKFLKEKNPNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFVPGVLEV---------------------- 192 (277)
Q Consensus 144 i~~~~~~~~~~~~vigV~~~~~~~~~----~~~~-----~~~~~~gl~~~~~~~~~~~---------------------- 192 (277)
++.+.+...|..|+|+| +.+++++. .++. ..+..+++.... +.++..
T Consensus 268 ~~~Ak~mGlPi~kli~a-~n~~~~l~~~l~~G~~~~~~~~~Tia~smdi~~-~sN~erl~~~l~~~d~~~~~~~~~~l~~ 345 (468)
T 4f4f_A 268 GYVAKRMGLPIEQLIIA-TNDNDILSRTLESGAYEMRGVAQTTSPSMDIQI-SSNFERLLFEAHGRDAAAVRGLMQGLKQ 345 (468)
T ss_dssp HHHHHHHTCCEEEEEEE-ECSCCHHHHHHHHSEEECCCCCCCSCGGGCCSS-CTTHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEEE-eCCchHHHHHHHcCCceecCCcceeCchhhcCc-cchHHHHHHHHhccCHHHHHHHHHHHHh
Confidence 99884443467799999 88777653 1221 223344544321 111100
Q ss_pred ------------ccc--CeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCCCCCCeEEEEecCCCCCCc
Q 023801 193 ------------NII--DEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYL 258 (277)
Q Consensus 193 ------------~~~--~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~~~~~~vv~i~~~gG~~~~ 258 (277)
... ...+.|+|+|+.++++.+++++|+++||++|++++++.++. .++.++|++.|.+|.|+.
T Consensus 346 ~g~~~~~~~~~~~~~~~~~~~~VsD~ei~~ai~~l~~~~g~~vEP~~Ava~aa~~~~~----~~~~~~V~l~Ta~~~Kf~ 421 (468)
T 4f4f_A 346 SGGFTISEKPLSAIRSEFSAGRSTVDETAATIESVLSKDGYLLDPHSAIGVKVAREKA----SGTAPMVVLATAHPAKFP 421 (468)
T ss_dssp HSEEECCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHC----CSSSCEEEEECBCGGGSH
T ss_pred cCCeeccHHHHHHHhhcceEEEECHHHHHHHHHHHHHHCCEEECHhHHHHHHHHHHHh----CCCCeEEEEecCCccccH
Confidence 000 12789999999999999999999999999999999998863 256789999988999887
Q ss_pred ch
Q 023801 259 SS 260 (277)
Q Consensus 259 ~~ 260 (277)
+.
T Consensus 422 ~~ 423 (468)
T 4f4f_A 422 DA 423 (468)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 41
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=1.7e-34 Score=267.53 Aligned_cols=252 Identities=13% Similarity=0.051 Sum_probs=186.9
Q ss_pred CChhHHHHH---HHHH-HcCC-----CCCCCcEEEeeCCchHHHHHHHHH--HHCCCeEEEEeCCC-CCHHHHHHHH---
Q 023801 1 MCRIGYSMI---SDAE-AKGL-----ITPGESVLIEPTSGNTGIGLAFMA--AAKQYRLIITMPAS-MSLERRIILR--- 65 (277)
Q Consensus 1 ~dR~a~~~v---~~a~-~~g~-----l~~g~~~vv~aSsGN~g~a~A~aa--~~~Gl~~~vvvp~~-~~~~~~~~~~--- 65 (277)
|||++..++ .+++ ++|. ++++ .+|+++||||||.| |++| ++.|++++||+|++ +++.++.+|.
T Consensus 124 KDrga~~~~~~~~~a~~~~g~~~~~~~~~~-~~Iv~ATSGNtG~A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~ 201 (514)
T 1kl7_A 124 KDVALQFVGNLFEYFLQRTNANLPEGEKKQ-ITVVGATSGDTGSA-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVP 201 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCSSSCCC-EEEEEECSSSHHHH-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCCC-CEEEECCCCcHHHH-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhc
Confidence 799999984 4443 3462 5555 67999999999999 6666 88999999999997 8987766663
Q ss_pred HcCCEEEEeCCCCChHHHHHHHHHHHHhCC-----CeEecCCCCCCcchhhhhhchHHHHHhhh-C---CCCCEEEEecC
Q 023801 66 AFGAELVLTDPAKGMKGAVQKAEEILAKTP-----NAYMLQQFENPANPKIHYETTGPELWKGS-G---GRIDALVSGIG 136 (277)
Q Consensus 66 ~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~-~---~~~d~iv~pvG 136 (277)
.+|++++.+++ +|+++.+.++++.++.+ +.++.++. ||.. +.||.+.++|+++|+ + +.||+||+|+|
T Consensus 202 g~~~~vv~v~g--~fdda~~~vk~l~~~~~~~~~~~~~~~Ns~-N~~r-i~gQ~tyy~e~~~ql~~~~~~~~d~~vvP~G 277 (514)
T 1kl7_A 202 DENVQTLSVTG--TFDNCQDIVKAIFGDKEFNSKHNVGAVNSI-NWAR-ILAQMTYYFYSFFQATNGKDSKKVKFVVPSG 277 (514)
T ss_dssp CTTEEEEEESS--CHHHHHHHHHHHHHCSSCC--CCBCCCCSC-CHHH-HHHHHHHHHHHHHHHHSSSSCCCEEEEEECS
T ss_pred CCCEEEEEcCC--CHHHHHHHHHHHHhcccccccceeEeeCCC-CHhH-HhhHHHHHHHHHHHHhhhcCCCCcEEEEECC
Confidence 45556666665 79999999999987642 22333332 4443 679999999999998 4 35899999999
Q ss_pred CchhHHHHHHHHhhcCCCcEEEEEecCCCCccC----CCCC------CCcccCccCCCCCccCccc---cccC-------
Q 023801 137 TGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKP------GPHKIQGIGAGFVPGVLEV---NIID------- 196 (277)
Q Consensus 137 ~Gg~~aGi~~~~~~~~~~~~vigV~~~~~~~~~----~~~~------~~~~~~gl~~~~~~~~~~~---~~~~------- 196 (277)
+||++.|++...+...|.+|+|+|+++++ ++. .+.. ..+...++... .|.++.. ...+
T Consensus 278 ngG~i~a~~~ak~~G~p~~rli~v~~~n~-~l~~~~~~G~~~~~~~~~~Tis~amdi~-~psn~er~l~~l~~~~~~~~~ 355 (514)
T 1kl7_A 278 NFGDILAGYFAKKMGLPIEKLAIATNEND-ILDRFLKSGLYERSDKVAATLSPAMDIL-ISSNFERLLWYLAREYLANGD 355 (514)
T ss_dssp SSHHHHHHHHHHHHTCCCCCEEEEECSCC-HHHHHHHHSEEECCSSCCCCSCGGGCCS-SCTTHHHHHHHHHHHHTSTTC
T ss_pred chHHHHHHHHHHHcCCCCCEEEEEeCCcc-hHHHHHhcCCccCCCCCCCeechhhhcC-CCCcHHHHHHHHhcccccccc
Confidence 99999999875444457789999999984 442 1211 12222333221 2333221 1111
Q ss_pred -----------------------------------eEEEeCHHHHHHHHHHHHHHc----CCeeeccHHHHHHHHHHHHh
Q 023801 197 -----------------------------------EVVQVSSDEAIETAKLLALKE----GLFVGISSGGAAAAAIEIAK 237 (277)
Q Consensus 197 -----------------------------------~~~~v~d~e~~~a~~~l~~~~----gi~~~p~sg~alaa~~~~~~ 237 (277)
.++.|+|+|++++++.+++++ |+++||+||+++++++++.+
T Consensus 356 ~~~d~~~v~~~~~~l~~~gg~~~~~~~~~~~~~~f~~~~Vsd~e~~~ai~~l~~~~~~~~G~~~ep~tAv~~aa~~~~~~ 435 (514)
T 1kl7_A 356 DLKAGEIVNNWFQELKTNGKFQVDKSIIEGASKDFTSERVSNEETSETIKKIYESSVNPKHYILDPHTAVGVCATERLIA 435 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEECCHHHHHHHTTTEEEEECCHHHHHHHHHHHHHHCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHhcCCeeccHHHHHHhhcCceEEEECHHHHHHHHHHHHHhCCCCCCEEEcccHHHHHHHHHHHHH
Confidence 489999999999999999999 99999999999999999887
Q ss_pred cCCCCCCeEEEEecCCCCCCcch
Q 023801 238 RPENAGKLIVVIFPSFGERYLSS 260 (277)
Q Consensus 238 ~~~~~~~~vv~i~~~gG~~~~~~ 260 (277)
++..+++++|++.|.+|.||.+.
T Consensus 436 ~g~~~~~~vV~l~Ta~~~Kf~~~ 458 (514)
T 1kl7_A 436 KDNDKSIQYISLSTAHPAKFADA 458 (514)
T ss_dssp HHCCTTSEEEEEECBCGGGGHHH
T ss_pred hccCCCCcEEEEECCchhhhHHH
Confidence 63235778999999999988764
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=100.00 E-value=7.8e-33 Score=253.64 Aligned_cols=245 Identities=12% Similarity=0.031 Sum_probs=185.9
Q ss_pred CChhHHHH---HHHHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHH-HCCCeEEEEeCCC-CCHHHHHHHHHcCC---EE
Q 023801 1 MCRIGYSM---ISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPAS-MSLERRIILRAFGA---EL 71 (277)
Q Consensus 1 ~dR~a~~~---v~~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~-~~Gl~~~vvvp~~-~~~~~~~~~~~~Ga---~v 71 (277)
|||++..+ +.++++ +|. ..+|+++||||||.|+|++++ +.|++++||+|++ +++.|+.+|+.+|+ ++
T Consensus 130 KDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~Gi~~~I~~P~~~~s~~k~~qm~~~Ga~nv~v 205 (487)
T 3v7n_A 130 KDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEGVRVFMLSPHKKMSAFQTAQMYSLQDPNIFN 205 (487)
T ss_dssp HHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTTEEEEEEEETTCSCHHHHHHHHTCCCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccCCeEEEEECCCCCCHHHHHHHHhcCCCcEEE
Confidence 79999998 888864 454 146999999999999777776 8999999999998 99999999999998 67
Q ss_pred EEeCCCCChHHHHHHHHHHHH------hCCCeEecCCCCCCcchhhhhhchHHHHHhhhC---CCCCEEEEecCCchhHH
Q 023801 72 VLTDPAKGMKGAVQKAEEILA------KTPNAYMLQQFENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTIT 142 (277)
Q Consensus 72 ~~~~~~~~~~~~~~~a~~~~~------~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~---~~~d~iv~pvG~Gg~~a 142 (277)
+.+++ +|+++.+.++++.+ +. +.++++++ ||.. ++||++.++|+..|+. +.||+|++|+|+||+++
T Consensus 206 v~v~G--~fDda~~~vk~~~~d~~~~~~~-~l~~vns~-Np~r-i~gQ~tyy~~~~~el~~~~~~~d~vvVP~GngG~i~ 280 (487)
T 3v7n_A 206 LAVNG--VFDDCQDIVKAVSNDHAFKAQQ-KIGTVNSI-NWAR-VVAQVVYYFKGYFAATRSNDERVSFTVPSGNFGNVC 280 (487)
T ss_dssp EEEES--CHHHHHHHHHHHHTCHHHHHHT-TEECCSTT-CHHH-HHHHHHHHHHHHHHTCSSTTCCEEEEEGGGCHHHHH
T ss_pred EEECC--CHHHHHHHHHHhhhchHHHhhc-CeeeeCCC-CHHH-HHhHHHHHHHHHHHHHhcCCCCcEEEEecCchHHHH
Confidence 77775 78999998888865 33 56777775 6776 8899988888888873 35999999999999999
Q ss_pred HHHHHHhhcCCCcEEEEEecCCCCccC----CCCC-----CCcc---cCccCCCCCccCcc---c---------------
Q 023801 143 GAGKFLKEKNPNIKLYGIEPTESPVLS----GGKP-----GPHK---IQGIGAGFVPGVLE---V--------------- 192 (277)
Q Consensus 143 Gi~~~~~~~~~~~~vigV~~~~~~~~~----~~~~-----~~~~---~~gl~~~~~~~~~~---~--------------- 192 (277)
|++.+.+...|.+|+|++++++ +++. .++. ..+. ..++..+. |.++. +
T Consensus 281 g~~~A~~mGlp~~rli~a~~~n-~~l~~~~~~G~~~~~~~~~Ti~t~s~smdI~~-psn~er~l~~l~~~d~~~~~~~m~ 358 (487)
T 3v7n_A 281 AGHIARMMGLPIEKLVVATNEN-DVLDEFFRTGAYRVRSAQDTYHTSSPSMDISK-ASNFERFVFDLLGRDPARVVQLFR 358 (487)
T ss_dssp HHHHHHHTTCCEEEEEEECTTC-HHHHHHHHHSEEEC-------------------CHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHcCCCCceEEEEeCCC-cHHHHHHHcCCcccCCCCCccccCCchhccCC-CccHHHHHHHHhCCCHHHHHHHHH
Confidence 9998765445777999999998 4432 2211 1122 33333221 11100 0
Q ss_pred --------------------cccCeEEEeCHHHHHHHHHHHHHHcCCeeeccHHHHHHHHHHHHhcCCCCCCeEEEEecC
Q 023801 193 --------------------NIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPS 252 (277)
Q Consensus 193 --------------------~~~~~~~~v~d~e~~~a~~~l~~~~gi~~~p~sg~alaa~~~~~~~~~~~~~~vv~i~~~ 252 (277)
......+.|+|+|++++++.+++++|+++||+||++++++.++.+ ++.++|++.|.
T Consensus 359 ~l~~~g~~~l~~~~~~~~~~~~~~~~~~VsDee~~~air~l~~~~G~l~dPhtAva~aaa~~~~~----~~~~~V~l~Ta 434 (487)
T 3v7n_A 359 DVEQKGGFDLAASGDFARVAEFGFVSGRSTHADRIATIRDVFERYRTMIDTHTADGLKVAREHLR----PGVPMVVLETA 434 (487)
T ss_dssp HHHHHSEEETTTTTCTHHHHHTTEEEECCCHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHTTSCC----TTSCEEEEECB
T ss_pred HHHhcCCeecccchhHHHHHhhcceEEEECHHHHHHHHHHHHHHcCEEEChhHHHHHHHHHHhhC----CCCcEEEEecC
Confidence 001245789999999999999999999999999999999887532 46678999988
Q ss_pred CCCCCcch
Q 023801 253 FGERYLSS 260 (277)
Q Consensus 253 gG~~~~~~ 260 (277)
.+.|+.+.
T Consensus 435 ~p~Kf~~~ 442 (487)
T 3v7n_A 435 QPIKFGES 442 (487)
T ss_dssp CGGGGHHH
T ss_pred CccccHHH
Confidence 89988774
No 43
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.14 E-value=0.38 Score=35.79 Aligned_cols=97 Identities=22% Similarity=0.158 Sum_probs=65.4
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
.+++....|..|..+|...+..|.+++++-. .+.+.+.++..|..++.-+... .
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~~~~g~~~i~gd~~~--~--------------------- 61 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDELRERGVRAVLGNAAN--E--------------------- 61 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEESCTTS--H---------------------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHcCCCEEECCCCC--H---------------------
Confidence 3588888999999999999999999888744 4566777777777765544311 1
Q ss_pred CCCCcchhhhhhchHHHHHhhhC-CCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEe
Q 023801 103 FENPANPKIHYETTGPELWKGSG-GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIE 161 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~-~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~ 161 (277)
|++++.+ ...|.+|++++.-....-+...++..+|..++++-.
T Consensus 62 ----------------~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 62 ----------------EIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp ----------------HHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred ----------------HHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 1122211 246888888877554444556677777878877654
No 44
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.57 E-value=0.77 Score=39.56 Aligned_cols=62 Identities=21% Similarity=0.163 Sum_probs=47.0
Q ss_pred HHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 10 SDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 10 ~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
.+++++..+++|.+.+| ..+|.-|.+++..|+.+|.+++++.. ++.|++.++.+|++.++..
T Consensus 156 ~~~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 156 YKGLKVTDTRPGQWVVI-SGIGGLGHVAVQYARAMGLRVAAVDI---DDAKLNLARRLGAEVAVNA 217 (340)
T ss_dssp HHHHHTTTCCTTSEEEE-ECCSTTHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTCSEEEET
T ss_pred HHHHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHcCCCEEEeC
Confidence 45566778899966555 45688999999999999997665533 5688888999999765543
No 45
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.51 E-value=0.65 Score=39.94 Aligned_cols=60 Identities=23% Similarity=0.231 Sum_probs=46.4
Q ss_pred HHH-HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHH-HHcCCEEEE
Q 023801 11 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVL 73 (277)
Q Consensus 11 ~a~-~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~-~~~Ga~v~~ 73 (277)
+++ +.+.+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+++.+ +.+|++.++
T Consensus 139 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~~~ 200 (336)
T 4b7c_A 139 FALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG---GAEKCRFLVEELGFDGAI 200 (336)
T ss_dssp HHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCSEEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCCEEE
Confidence 444 7788999977777777899999999999999997666532 45777777 788886544
No 46
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.43 E-value=0.63 Score=39.86 Aligned_cols=58 Identities=28% Similarity=0.290 Sum_probs=45.4
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
+.+.+++|.+.+|...+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.++.
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~ 191 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETID 191 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEe
Confidence 4577899977666666899999999999999997666543 567888888888865543
No 47
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.38 E-value=0.67 Score=40.44 Aligned_cols=60 Identities=25% Similarity=0.237 Sum_probs=46.2
Q ss_pred HHH-HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 11 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 11 ~a~-~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.++ +.+.+++|.+.+|.. +|.-|.+++..|+.+|.+++++. .++.|++.++.+|++.++.
T Consensus 179 ~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 179 FALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTS---SSREKLDRAFALGADHGIN 239 (363)
T ss_dssp HHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEe---cCchhHHHHHHcCCCEEEc
Confidence 444 678889997665655 89999999999999999866653 3567888888999865544
No 48
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.36 E-value=0.62 Score=40.52 Aligned_cols=61 Identities=23% Similarity=0.145 Sum_probs=47.1
Q ss_pred HHH-HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 11 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 11 ~a~-~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.++ +.+.+++|.+.+|...+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.++.
T Consensus 157 ~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~ 218 (353)
T 4dup_A 157 ANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEACERLGAKRGIN 218 (353)
T ss_dssp HHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEe
Confidence 344 6678899977666668999999999999999998665532 557888888889876543
No 49
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.20 E-value=0.97 Score=38.82 Aligned_cols=59 Identities=22% Similarity=0.313 Sum_probs=45.7
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
+.+.+++|.+.+|...+|.-|.+++..++..|.+++++.. ++.|++.++.+|++.++..
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINA 200 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeC
Confidence 4567889977666666899999999999999998666543 4678888888998765543
No 50
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.99 E-value=0.76 Score=39.29 Aligned_cols=62 Identities=27% Similarity=0.319 Sum_probs=47.2
Q ss_pred HHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 10 SDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 10 ~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
.++++++.+++|.+.+|...+|.-|.+++..|+.+|.+++++. ++.+++.++.+|++.++..
T Consensus 142 ~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~~ 203 (321)
T 3tqh_A 142 LQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCINY 203 (321)
T ss_dssp HHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEET
T ss_pred HHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEeC
Confidence 3455778899996655555699999999999999999766553 3466888899999865543
No 51
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.84 E-value=0.62 Score=40.32 Aligned_cols=60 Identities=23% Similarity=0.362 Sum_probs=45.6
Q ss_pred HHH-HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 11 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 11 ~a~-~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
.++ +.+.+++|.+.+|...+|.-|.+++..++.+|.+++++... +.+++.++.+|++.++
T Consensus 149 ~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~v~ 209 (342)
T 4eye_A 149 FAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR---TAATEFVKSVGADIVL 209 (342)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEe
Confidence 344 67788999776777777999999999999999987666543 3566777778886554
No 52
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=92.63 E-value=0.86 Score=36.03 Aligned_cols=67 Identities=19% Similarity=0.255 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe-------C--CCCCHHHHHHHHHcCCEEEEe
Q 023801 4 IGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-------P--ASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 4 ~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv-------p--~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.....+.+|.+.|- + ..||.+|+|.++..++-.. -|++.++|. | ...++..++.++..|.+|+..
T Consensus 31 tl~la~era~e~~I-k---~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~ 104 (201)
T 1vp8_A 31 TLRLAVERAKELGI-K---HLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQ 104 (201)
T ss_dssp HHHHHHHHHHHHTC-C---EEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHcCC-C---EEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEE
Confidence 44556777888774 2 4455556699887766633 688998887 3 355889999999999999988
Q ss_pred CC
Q 023801 75 DP 76 (277)
Q Consensus 75 ~~ 76 (277)
..
T Consensus 105 tH 106 (201)
T 1vp8_A 105 SH 106 (201)
T ss_dssp CC
T ss_pred ec
Confidence 64
No 53
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.62 E-value=1.1 Score=38.77 Aligned_cols=57 Identities=23% Similarity=0.275 Sum_probs=45.7
Q ss_pred HHH-HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEE
Q 023801 11 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 71 (277)
Q Consensus 11 ~a~-~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v 71 (277)
.++ +.+.+++|.+.+|...+|.-|.+++..|+..|.+++++ .++.+++.++.+|++.
T Consensus 140 ~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 140 EGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP 197 (343)
T ss_dssp HHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred HHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence 344 67888999776666668999999999999999975554 3567888889999987
No 54
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.35 E-value=0.91 Score=39.33 Aligned_cols=60 Identities=17% Similarity=0.104 Sum_probs=45.4
Q ss_pred HHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCC-eEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 10 SDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 10 ~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl-~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
.+++++..+++|.+.+|. .+|.-|.+.+..|+.+|. +++++ ..++.|++.++.+|++.++
T Consensus 156 ~~al~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~~---~~~~~~~~~~~~lGa~~vi 216 (352)
T 3fpc_A 156 FHGAELANIKLGDTVCVI-GIGPVGLMSVAGANHLGAGRIFAV---GSRKHCCDIALEYGATDII 216 (352)
T ss_dssp HHHHHHTTCCTTCCEEEE-CCSHHHHHHHHHHHTTTCSSEEEE---CCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEE---CCCHHHHHHHHHhCCceEE
Confidence 345577788999776565 579999999999999998 45554 3456788888999986544
No 55
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.32 E-value=1.4 Score=38.84 Aligned_cols=58 Identities=21% Similarity=0.280 Sum_probs=43.5
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEE
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 71 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v 71 (277)
+++++..+++|.+.+| ..+|.-|...+..|+.+|.+.++.+ ..++.|++.++.+|+++
T Consensus 176 ~al~~~~~~~g~~VlV-~GaG~vG~~aiqlAk~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~ 233 (398)
T 1kol_A 176 HGAVTAGVGPGSTVYV-AGAGPVGLAAAASARLLGAAVVIVG--DLNPARLAHAKAQGFEI 233 (398)
T ss_dssp HHHHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHTTCEE
T ss_pred HHHHHcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCCeEEEE--cCCHHHHHHHHHcCCcE
Confidence 3445677889966555 5579999999999999998544443 23568889999999984
No 56
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.22 E-value=1 Score=39.47 Aligned_cols=61 Identities=18% Similarity=0.171 Sum_probs=45.0
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.+++...+++|.+.+|. .+|.-|.+++..|+.+|.+-++++ ..++.|++..+.+|++.++.
T Consensus 173 ~~l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 173 HGVDLSGIKAGSTVAIL-GGGVIGLLTVQLARLAGATTVILS--TRQATKRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEEC
T ss_pred HHHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEC
Confidence 34566778898665555 569999999999999999544443 33567888889999976543
No 57
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.15 E-value=0.76 Score=40.24 Aligned_cols=52 Identities=25% Similarity=0.100 Sum_probs=41.1
Q ss_pred CCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 19 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 19 ~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
++|.+.+|...+|.-|.+++..|+.+|.+++++. ++.|++.++.+|++.++.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~ 214 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFD 214 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEE
Confidence 6776766666779999999999999999866553 356788889999975554
No 58
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.04 E-value=1.6 Score=37.55 Aligned_cols=63 Identities=17% Similarity=0.164 Sum_probs=48.8
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.+.+...+++|.+ |+...+|.-|...+..|+.+|...++++. .++.|++..+.+||+.++...
T Consensus 151 ~~~~~~~~~~g~~-VlV~GaG~vG~~aiq~ak~~G~~~vi~~~--~~~~k~~~a~~lGa~~~i~~~ 213 (346)
T 4a2c_A 151 HAFHLAQGCENKN-VIIIGAGTIGLLAIQCAVALGAKSVTAID--ISSEKLALAKSFGAMQTFNSS 213 (346)
T ss_dssp HHHHHTTCCTTSE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEETT
T ss_pred HHHHHhccCCCCE-EEEECCCCcchHHHHHHHHcCCcEEEEEe--chHHHHHHHHHcCCeEEEeCC
Confidence 3456677888865 55556788999999999999999877653 356889999999998776654
No 59
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.63 E-value=0.99 Score=38.89 Aligned_cols=60 Identities=17% Similarity=0.227 Sum_probs=44.9
Q ss_pred HHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 12 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 12 a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
+.+...+++|.+.+|...+|.-|.+++..++.+|.+++++.... .+++.++.+|++.++.
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~ 195 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVID 195 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEE
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEe
Confidence 34677889997777777777999999999999999876665433 4566677788875543
No 60
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.37 E-value=1.8 Score=37.62 Aligned_cols=58 Identities=22% Similarity=0.344 Sum_probs=44.0
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
+.+.+++|.+.+|...+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.++.
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~ 214 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPIN 214 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEE
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEEe
Confidence 4567888866666666899999999999999997655543 457788888899875543
No 61
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=91.35 E-value=1.2 Score=39.02 Aligned_cols=53 Identities=25% Similarity=0.288 Sum_probs=40.6
Q ss_pred CCCcEEEee-CCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 20 PGESVLIEP-TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 20 ~g~~~vv~a-SsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
+|.+.+|.. .+|.-|.+++..|+.+|.+++++. .++.|++.++.+|++.++..
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~~~ 223 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIV---RKQEQADLLKAQGAVHVCNA 223 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEE---SSHHHHHHHHHTTCSCEEET
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHhCCCcEEEeC
Confidence 444656653 889999999999999999866654 35688999999999755543
No 62
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.19 E-value=2 Score=37.15 Aligned_cols=57 Identities=18% Similarity=0.196 Sum_probs=43.9
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
+.+.+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~ 212 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGF 212 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEE
Confidence 5677889877666666899999999999999997665543 45677777888887544
No 63
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.14 E-value=2.6 Score=35.97 Aligned_cols=56 Identities=21% Similarity=0.274 Sum_probs=42.8
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+.+.+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~ 194 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAA 194 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEE
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcEE
Confidence 5677888877777777899999999999999987665533 4566666777887543
No 64
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.94 E-value=2 Score=37.01 Aligned_cols=59 Identities=20% Similarity=0.226 Sum_probs=44.3
Q ss_pred HHHHc-CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 11 DAEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 11 ~a~~~-g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+++.+ +.+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 156 ~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~ 215 (343)
T 2eih_A 156 QMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADET 215 (343)
T ss_dssp HHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEE
Confidence 44544 57888877777777799999999999999997665533 4567777777887643
No 65
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.70 E-value=2 Score=37.02 Aligned_cols=60 Identities=22% Similarity=0.193 Sum_probs=44.0
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHC-CCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~-Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
+++++..+++|.+.+|+..+|.-|.+++..++.. |.+++++.. ++.+++.++.+|++.+.
T Consensus 161 ~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~ 221 (347)
T 1jvb_A 161 RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVI 221 (347)
T ss_dssp HHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred HHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEe
Confidence 4445577888877777777779999999999998 987555432 45677777778876543
No 66
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.61 E-value=2.8 Score=36.23 Aligned_cols=60 Identities=28% Similarity=0.334 Sum_probs=45.2
Q ss_pred HHH-HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 11 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 11 ~a~-~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
.++ +.+.+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.++
T Consensus 160 ~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~ 220 (351)
T 1yb5_A 160 RALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVF 220 (351)
T ss_dssp HHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEEE
Confidence 344 3677889977777777899999999999999987665533 45677777888876443
No 67
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=90.51 E-value=2.7 Score=32.76 Aligned_cols=55 Identities=31% Similarity=0.470 Sum_probs=39.7
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEE
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 71 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v 71 (277)
+.+.+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+.+.++.+|++.
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~ 86 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEY 86 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSE
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCE
Confidence 4567888877666666899999999999999987665533 345666666666643
No 68
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.12 E-value=3.7 Score=36.62 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=41.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.+|+....|..|+.+|-.-...|++++++ +..+.+++.++..|..++.-+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvI---d~d~~~v~~~~~~g~~vi~GDa 55 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVL---DHDPDHIETLRKFGMKVFYGDA 55 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEE---ECCHHHHHHHHHTTCCCEESCT
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEE---ECCHHHHHHHHhCCCeEEEcCC
Confidence 34888889999999999999999998887 4456778888888877766654
No 69
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.04 E-value=3 Score=36.85 Aligned_cols=56 Identities=27% Similarity=0.382 Sum_probs=41.9
Q ss_pred CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 16 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 16 g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
+.+++|.+.+|. .+|.-|.+.+..|+.+|..-++.+ ..++.|++.++.+|++.++.
T Consensus 209 ~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~ 264 (404)
T 3ip1_A 209 GGIRPGDNVVIL-GGGPIGLAAVAILKHAGASKVILS--EPSEVRRNLAKELGADHVID 264 (404)
T ss_dssp CCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEEC
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEc
Confidence 478899665555 569999999999999999434433 33568888999999976553
No 70
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.03 E-value=2.9 Score=35.61 Aligned_cols=59 Identities=24% Similarity=0.144 Sum_probs=43.5
Q ss_pred HHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 11 DAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 11 ~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+++. .+.+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 130 ~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~ 189 (327)
T 1qor_A 130 YLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQV 189 (327)
T ss_dssp HHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEE
Confidence 3443 677888877677776899999999999999987665533 3566777777777543
No 71
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.03 E-value=0.58 Score=39.86 Aligned_cols=59 Identities=19% Similarity=0.067 Sum_probs=45.0
Q ss_pred HHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 10 SDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 10 ~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
.++++...+++|.+.+|... |.-|.+++..|+.+|.+++++. ++.|++.++.+|++.++
T Consensus 132 ~~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 132 WQAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY 190 (315)
T ss_dssp HHHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence 34557788999976555555 9999999999999999766654 33567778889997665
No 72
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=90.02 E-value=1.6 Score=37.66 Aligned_cols=50 Identities=20% Similarity=0.283 Sum_probs=37.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
..||...+|.-|.+++..|+.+|.+++++.. ++.|++.++.+|++.++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~ 216 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---RDEQIALLKDIGAAHVLNE 216 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEES---CGGGHHHHHHHTCSEEEET
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEEC
Confidence 4555668899999999999999997666643 3456777788998765544
No 73
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.01 E-value=3.6 Score=35.37 Aligned_cols=59 Identities=22% Similarity=0.245 Sum_probs=43.5
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+++++..+++|.+.+|+..+|.-|.+++..++..|.+++++... +.+++.++.+|++.+
T Consensus 160 ~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~ 218 (347)
T 2hcy_A 160 KALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVF 218 (347)
T ss_dssp HHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEE
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceE
Confidence 45555568888787788888999999999999999876665433 245566677887643
No 74
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=89.99 E-value=1.6 Score=37.88 Aligned_cols=63 Identities=16% Similarity=0.140 Sum_probs=45.8
Q ss_pred HHHHc-CCCCCC-CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEE
Q 023801 11 DAEAK-GLITPG-ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL 73 (277)
Q Consensus 11 ~a~~~-g~l~~g-~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~ 73 (277)
.++.+ +.+++| .+.+|...+|.-|..++..|+.+|.+.+++...... ..+.+.++.+|++.++
T Consensus 156 ~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 156 LMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI 221 (364)
T ss_dssp HHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred HHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence 34444 578888 776666667999999999999999987777654433 3345666889987544
No 75
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=89.96 E-value=3.3 Score=35.87 Aligned_cols=61 Identities=21% Similarity=0.166 Sum_probs=44.1
Q ss_pred HHHHHc--CCCCCCCcEEEeeCCchHHHHHHHHHHHC-CCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 10 SDAEAK--GLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 10 ~~a~~~--g~l~~g~~~vv~aSsGN~g~a~A~aa~~~-Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.+++++ ..+++|.+.+|. ..|.-|..++..|+.+ |.+++++.+ ++.|++.++.+||+.++.
T Consensus 174 ~~al~~~~~~~~~g~~VlV~-GaG~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~ 237 (359)
T 1h2b_A 174 YRAVKKAARTLYPGAYVAIV-GVGGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAERLGADHVVD 237 (359)
T ss_dssp HHHHHHHHTTCCTTCEEEEE-CCSHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCEEEe
Confidence 344555 778888664444 4599999999999999 987555432 467888889999975543
No 76
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=89.94 E-value=2.3 Score=36.98 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=42.6
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
+...+++|.+.+|. .+|.-|.+++..|+.+|.+.++.+. .++.|++.++.+|++.++.
T Consensus 184 ~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~ 241 (371)
T 1f8f_A 184 NALKVTPASSFVTW-GAGAVGLSALLAAKVCGASIIIAVD--IVESRLELAKQLGATHVIN 241 (371)
T ss_dssp TTTCCCTTCEEEEE-SCSHHHHHHHHHHHHHTCSEEEEEE--SCHHHHHHHHHHTCSEEEE
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCCEEec
Confidence 56778898765555 4799999999999999985333332 2567888888999865543
No 77
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.67 E-value=3.9 Score=35.25 Aligned_cols=56 Identities=21% Similarity=0.337 Sum_probs=42.8
Q ss_pred HcCCCCCC--CcEEEeeCCchHHHHHHHHHHHCCC-eEEEEeCCCCCHHHHHHHHH-cCCEEE
Q 023801 14 AKGLITPG--ESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRA-FGAELV 72 (277)
Q Consensus 14 ~~g~l~~g--~~~vv~aSsGN~g~a~A~aa~~~Gl-~~~vvvp~~~~~~~~~~~~~-~Ga~v~ 72 (277)
+.+.+++| .+.+|+..+|.-|.+++..++..|. +++++.. ++.+++.++. +|++.+
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~ 211 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAA 211 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceE
Confidence 56778888 8878887789999999999999998 6665543 3466777765 887543
No 78
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=89.64 E-value=1.6 Score=38.27 Aligned_cols=59 Identities=24% Similarity=0.249 Sum_probs=44.8
Q ss_pred HHHHcCC-CCCCCcEEEeeCCchHHHHHHHHHHHCC-CeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 11 DAEAKGL-ITPGESVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 11 ~a~~~g~-l~~g~~~vv~aSsGN~g~a~A~aa~~~G-l~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
.++++.. +++|.+.+|.. +|.-|.+++..|+.+| .+++++.+ ++.|++.++.+|++.++
T Consensus 185 ~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 245 (380)
T 1vj0_A 185 HAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTL 245 (380)
T ss_dssp HHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEE
Confidence 4455667 88887666666 8999999999999999 47666543 45788888999987544
No 79
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.64 E-value=1.3 Score=38.18 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=43.4
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
+++++..+++|.+.+|. .+|.-|.+++..|+.+|.+++++.. ++.|++.++.+|++.++
T Consensus 167 ~~l~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 167 SPLKFSKVTKGTKVGVA-GFGGLGSMAVKYAVAMGAEVSVFAR---NEHKKQDALSMGVKHFY 225 (348)
T ss_dssp HHHHHTTCCTTCEEEEE-SCSHHHHHHHHHHHHTTCEEEEECS---SSTTHHHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCEEEEE-CCcHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHhcCCCeec
Confidence 34455578888665554 5699999999999999997665533 33567778889997666
No 80
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.58 E-value=1.3 Score=39.72 Aligned_cols=56 Identities=23% Similarity=0.274 Sum_probs=46.0
Q ss_pred cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 15 KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 15 ~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
...+++|.+.+|...+|.-|.+++..|+.+|.+++++. .++.|++.++.+|++.++
T Consensus 215 ~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~---~~~~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 215 GAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV---SSAQKEAAVRALGCDLVI 270 (447)
T ss_dssp TTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTTCCCEE
T ss_pred ccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCCEEE
Confidence 47788997766666679999999999999999877775 367888999999997654
No 81
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.56 E-value=3.1 Score=35.54 Aligned_cols=59 Identities=22% Similarity=0.223 Sum_probs=43.1
Q ss_pred HHH-HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 11 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 11 ~a~-~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+++ +.+.+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 135 ~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~ 194 (333)
T 1wly_A 135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHT 194 (333)
T ss_dssp HHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEE
Confidence 344 3677888877666666899999999999999987665533 3466777777787643
No 82
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.41 E-value=1.9 Score=38.89 Aligned_cols=57 Identities=30% Similarity=0.313 Sum_probs=46.8
Q ss_pred CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 16 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 16 g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
..+++|.+.+|...+|.-|.+.+..|+.+|.+++++.. ++.|++.++.+|++.++..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHhhCCcEEEec
Confidence 67889976666666799999999999999998877763 6789999999999876554
No 83
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.37 E-value=2.9 Score=36.12 Aligned_cols=58 Identities=24% Similarity=0.267 Sum_probs=42.9
Q ss_pred HHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 12 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 12 a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
++++..+++|.+.+|.. +|.-|.+++..|+.+|.+++++ . .++.+++.++.+|++.++
T Consensus 160 al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~-~--~~~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 160 ACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCT-A--RSPRRLEVAKNCGADVTL 217 (352)
T ss_dssp HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEE-E--SCHHHHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEE-c--CCHHHHHHHHHhCCCEEE
Confidence 44556688886656655 6999999999999999984333 2 356788888999997543
No 84
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=89.20 E-value=4 Score=35.08 Aligned_cols=57 Identities=28% Similarity=0.264 Sum_probs=43.5
Q ss_pred HcCCCC------CCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 14 AKGLIT------PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 14 ~~g~l~------~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
+...++ +|.+.+|...+|.-|.+++..|+.+|.+++++. .++.|++.++.+|++.++
T Consensus 138 ~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi 200 (346)
T 3fbg_A 138 DVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTA---SRNETIEWTKKMGADIVL 200 (346)
T ss_dssp TTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC---CSHHHHHHHHHHTCSEEE
T ss_pred HhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCcEEE
Confidence 456676 786766666899999999999999999755552 356788888888886544
No 85
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=89.18 E-value=3.4 Score=35.53 Aligned_cols=57 Identities=35% Similarity=0.415 Sum_probs=42.5
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCC-eEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl-~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+++++..+ +|.+.+|... |.-|.+++..++.+|. +++++.. ++.+++.++.+|++.+
T Consensus 159 ~~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~ 216 (348)
T 2d8a_A 159 DTVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYV 216 (348)
T ss_dssp HHHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEE
T ss_pred HHHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEE
Confidence 44566777 8877666655 9999999999999998 6665533 4677888888888644
No 86
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.13 E-value=1.8 Score=37.58 Aligned_cols=60 Identities=25% Similarity=0.309 Sum_probs=46.3
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEE
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL 73 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~ 73 (277)
+.+.+++|.+.+|...+|.-|..+...|+.+|.+.++++..... ..+++.++.+|++.++
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence 45778899776666667999999999999999998877755433 4567788899997554
No 87
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=88.83 E-value=3.5 Score=35.35 Aligned_cols=53 Identities=26% Similarity=0.263 Sum_probs=39.0
Q ss_pred CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 16 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 16 g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
..+++|.+.+|... |.-|.+++..++.+|.+++++. .++.+++.++.+|++.+
T Consensus 160 ~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~ 212 (339)
T 1rjw_A 160 TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVD---IGDEKLELAKELGADLV 212 (339)
T ss_dssp HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCSEE
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHCCCCEE
Confidence 35788866555555 7799999999999998655543 25677888888898643
No 88
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=88.82 E-value=3 Score=35.79 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=40.2
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHC-CCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~-Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
.+++...++||.+.+| ..+|.-|...+..++++ |.+++++. .++.|++..+.+|++.++..
T Consensus 154 ~~l~~~~~~~g~~VlV-~GaG~~g~~a~~~a~~~~g~~Vi~~~---~~~~r~~~~~~~Ga~~~i~~ 215 (348)
T 4eez_A 154 KAIKVSGVKPGDWQVI-FGAGGLGNLAIQYAKNVFGAKVIAVD---INQDKLNLAKKIGADVTINS 215 (348)
T ss_dssp HHHHHHTCCTTCEEEE-ECCSHHHHHHHHHHHHTSCCEEEEEE---SCHHHHHHHHHTTCSEEEEC
T ss_pred eeecccCCCCCCEEEE-EcCCCccHHHHHHHHHhCCCEEEEEE---CcHHHhhhhhhcCCeEEEeC
Confidence 3445556788865444 55666666666666655 66666553 35678888999999876654
No 89
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=88.55 E-value=3.5 Score=36.25 Aligned_cols=57 Identities=25% Similarity=0.196 Sum_probs=42.8
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCC-eEEEEeCCCCCHHHHHHHHHcCCEE
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAEL 71 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl-~~~vvvp~~~~~~~~~~~~~~Ga~v 71 (277)
+++++..+++|.+.+|. .+|.-|..++..|+.+|. +++++.+ ++.|++.++.+|+++
T Consensus 176 ~al~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~ 233 (398)
T 2dph_A 176 HGCVSAGVKPGSHVYIA-GAGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLLSDAGFET 233 (398)
T ss_dssp HHHHHTTCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHTTTCEE
T ss_pred HHHHHcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCcE
Confidence 44456778999665554 569999999999999998 5555432 567888889999974
No 90
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=88.47 E-value=3.5 Score=35.36 Aligned_cols=56 Identities=21% Similarity=0.227 Sum_probs=42.2
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH-HcCCEEE
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELV 72 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~-~~Ga~v~ 72 (277)
+...+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+++.++ .+|++.+
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~ 205 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLLKTKFGFDDA 205 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTSCCSEE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCceE
Confidence 5677888877777777899999999999999987555432 456777776 6887543
No 91
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=88.37 E-value=3.1 Score=36.31 Aligned_cols=61 Identities=25% Similarity=0.208 Sum_probs=45.0
Q ss_pred HHH-HcCC----CCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 11 DAE-AKGL----ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 11 ~a~-~~g~----l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
.++ +.+. +++|.+.+|...+|.-|.+++..|+.+|.+++++. ++.+++.++.+|++.++..
T Consensus 169 ~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~~~ 234 (375)
T 2vn8_A 169 SAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC----SQDASELVRKLGADDVIDY 234 (375)
T ss_dssp HHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred HHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe----ChHHHHHHHHcCCCEEEEC
Confidence 344 3566 78887766666689999999999999998765543 2356777889999765543
No 92
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.56 E-value=1.5 Score=37.54 Aligned_cols=58 Identities=26% Similarity=0.316 Sum_probs=42.8
Q ss_pred HHcCCCCCCC-cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 13 EAKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 13 ~~~g~l~~g~-~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
+++..+++|. +.+|...+|.-|..++..|+.+|.+++++.... .|++.++.+|++.++
T Consensus 141 ~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 141 LEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA---AEHDYLRVLGAKEVL 199 (328)
T ss_dssp HHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT---TCHHHHHHTTCSEEE
T ss_pred HhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHcCCcEEE
Confidence 4456678874 666666679999999999999999866665442 456677889987554
No 93
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=87.03 E-value=2.6 Score=36.49 Aligned_cols=59 Identities=31% Similarity=0.401 Sum_probs=43.0
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCC-eEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl-~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
+++++..+++|.+.+|. .+|.-|.+++..|+.+|. +++++. .++.|++.++.+|++.++
T Consensus 162 ~al~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~---~~~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 162 HACRRGGVTLGHKVLVC-GAGPIGMVTLLVAKAMGAAQVVVTD---LSATRLSKAKEIGADLVL 221 (356)
T ss_dssp HHHHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHhCCCEEE
Confidence 34455678888665555 569999999999999998 555443 256788888999996443
No 94
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=86.91 E-value=3.2 Score=36.19 Aligned_cols=57 Identities=19% Similarity=0.232 Sum_probs=41.9
Q ss_pred HHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCe-EEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 13 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 13 ~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~-~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
.+...+++|.+.+|. ..|.-|.+++..|+.+|.+ ++++ . .++.|++..+.+|++.++
T Consensus 186 ~~~~~~~~g~~VlV~-GaG~vG~~a~q~a~~~Ga~~Vi~~-~--~~~~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 186 WNTAKVEPGSNVAIF-GLGTVGLAVAEGAKTAGASRIIGI-D--IDSKKYETAKKFGVNEFV 243 (378)
T ss_dssp HTTTCCCTTCCEEEE-CCSHHHHHHHHHHHHHTCSCEEEE-C--SCTTHHHHHHTTTCCEEE
T ss_pred HhhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEE-c--CCHHHHHHHHHcCCcEEE
Confidence 366788899775555 5599999999999999994 5444 2 233677788899986543
No 95
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=86.81 E-value=2.2 Score=36.90 Aligned_cols=57 Identities=18% Similarity=0.179 Sum_probs=40.1
Q ss_pred cCCCCCC------CcEEEeeCCchHHHHH-HHHH-HHCCCe-EEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 15 KGLITPG------ESVLIEPTSGNTGIGL-AFMA-AAKQYR-LIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 15 ~g~l~~g------~~~vv~aSsGN~g~a~-A~aa-~~~Gl~-~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+..+++| .+.+|... |.-|..+ +..| +.+|.+ ++++.+......|++.++.+|++.+
T Consensus 161 ~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 161 HAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV 226 (357)
T ss_dssp HHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred hcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence 3345666 66566555 9999999 9999 899997 6665544322237777889999765
No 96
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=86.27 E-value=2.3 Score=36.85 Aligned_cols=59 Identities=19% Similarity=0.161 Sum_probs=41.4
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
+++++..+++|.+.+|... |.-|..++..|+.+|.+++++.... .+++.++.+|++.++
T Consensus 170 ~~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~---~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 170 SPLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS---RKREDAMKMGADHYI 228 (360)
T ss_dssp HHHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEE
T ss_pred HHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHcCCCEEE
Confidence 4444567888866555555 9999999999999999855554332 456666778886543
No 97
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.19 E-value=1.7 Score=37.18 Aligned_cols=58 Identities=22% Similarity=0.314 Sum_probs=42.8
Q ss_pred HHcCCCCCCC-cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 13 EAKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 13 ~~~g~l~~g~-~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
.++..+++|. +.+|...+|.-|..++..|+.+|.+++++.... .|++.++.+|++.++
T Consensus 142 ~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~v~ 200 (330)
T 1tt7_A 142 LEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR---EAADYLKQLGASEVI 200 (330)
T ss_dssp HHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS---STHHHHHHHTCSEEE
T ss_pred HHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHcCCcEEE
Confidence 4456678874 666666679999999999999999866665543 456667788987543
No 98
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=86.09 E-value=2.3 Score=35.83 Aligned_cols=55 Identities=27% Similarity=0.378 Sum_probs=41.0
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+.+ +++|.+.+|...+|.-|.+++..++.+|.+++++... +.+++.++.+|++.+
T Consensus 120 ~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~ 174 (302)
T 1iz0_A 120 RAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEA 174 (302)
T ss_dssp HTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEE
T ss_pred Hhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhcCCCEE
Confidence 356 8888776677677999999999999999876665442 355666677888644
No 99
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.07 E-value=3.4 Score=35.88 Aligned_cols=57 Identities=9% Similarity=0.125 Sum_probs=41.6
Q ss_pred cCCCC--C-------CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 15 KGLIT--P-------GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 15 ~g~l~--~-------g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+..++ | |.+.+|... |.-|.+++..++.+|.+++++........+++.++.+|++.+
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred ccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 56677 7 866666665 999999999999999976666543223356777788888765
No 100
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=85.55 E-value=5 Score=34.41 Aligned_cols=54 Identities=22% Similarity=0.326 Sum_probs=40.1
Q ss_pred CCCCCCcEEEeeCCchHHHHHHHHHHHC-CCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 17 LITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 17 ~l~~g~~~vv~aSsGN~g~a~A~aa~~~-Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.+++|.+.+|. .+|.-|.+.+..|+.+ |.+++++ ..++.|++.++.+|++.++.
T Consensus 168 ~~~~g~~vlv~-GaG~vG~~a~qla~~~g~~~Vi~~---~~~~~~~~~~~~lGa~~~i~ 222 (345)
T 3jv7_A 168 LLGPGSTAVVI-GVGGLGHVGIQILRAVSAARVIAV---DLDDDRLALAREVGADAAVK 222 (345)
T ss_dssp GCCTTCEEEEE-CCSHHHHHHHHHHHHHCCCEEEEE---ESCHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE---cCCHHHHHHHHHcCCCEEEc
Confidence 67888664554 5699999999999998 6665554 23568888999999876544
No 101
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=85.44 E-value=14 Score=30.42 Aligned_cols=73 Identities=16% Similarity=0.075 Sum_probs=44.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 94 (277)
|+..|||..++--|+++|..-.+.|.++++. ..+.. ....+.++..|.+++.+... .+.++..+...+..++.
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~-~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILN-DIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEC-CSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 4477888899999999999998888876553 22111 12344556677777665421 23334444445554544
No 102
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=85.42 E-value=5.9 Score=34.55 Aligned_cols=47 Identities=23% Similarity=0.266 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHc-CC-CCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEE
Q 023801 3 RIGYSMISDAEAK-GL-ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLII 50 (277)
Q Consensus 3 R~a~~~v~~a~~~-g~-l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~v 50 (277)
|++++.++.+++. |. --+| ++|+....||-|+.+|..++.+|.++++
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~G-ktV~I~G~GnVG~~~A~~l~~~GakVvv 203 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDG-LTVLVQGLGAVGGSLASLAAEAGAQLLV 203 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCC-CEEEEECcCHHHHHHHHHHHHCCCEEEE
Confidence 5667777777653 43 2345 5688889999999999999999988773
No 103
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=85.28 E-value=2.1 Score=36.37 Aligned_cols=58 Identities=19% Similarity=0.280 Sum_probs=42.6
Q ss_pred HcCCCCCCC-cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 14 AKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 14 ~~g~l~~g~-~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
++..++|+. +.+|...+|.-|.+++..|+.+|.+++++.+. +.|++.++.+|++.++.
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi~ 197 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYLKSLGANRILS 197 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTCSEEEE
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEEe
Confidence 444466632 55666667999999999999999987776543 46788888899976553
No 104
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.23 E-value=11 Score=31.15 Aligned_cols=74 Identities=12% Similarity=0.061 Sum_probs=46.1
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC-CHHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~-~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
|+..|||..++--|+++|..-.+.|.+++++-.... -....+.++..|.+++.+.. -.+.++..+...+..++.
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 336789999999999999998899988766532211 11234556777887765532 124444444555555554
No 105
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=85.21 E-value=5.1 Score=34.18 Aligned_cols=62 Identities=21% Similarity=0.098 Sum_probs=44.5
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHH----HcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~~~ 75 (277)
+.|.+++|.+..++.=.+|.++|++.+++++|++++++-|++- ++.-+..++ ..|+.+..+.
T Consensus 139 ~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 206 (307)
T 3tpf_A 139 WNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGY 206 (307)
T ss_dssp TTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 4676665645444444589999999999999999999999864 333333333 6799888876
No 106
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=84.99 E-value=4.2 Score=35.31 Aligned_cols=57 Identities=18% Similarity=0.146 Sum_probs=40.8
Q ss_pred HHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 13 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 13 ~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
.+...+++|.+.+|. .+|.-|..++..|+.+|..-++.+. .++.|++.++.+|++.+
T Consensus 184 ~~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~v 240 (373)
T 1p0f_A 184 VNTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRIIGVG--THKDKFPKAIELGATEC 240 (373)
T ss_dssp HTTTCCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHTTCSEE
T ss_pred HhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCcEE
Confidence 356778898665555 5799999999999999984333332 23467777888998644
No 107
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.88 E-value=11 Score=28.73 Aligned_cols=95 Identities=15% Similarity=0.116 Sum_probs=60.9
Q ss_pred EEEeeCCchHHHHHHHHHHHC-CCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~-Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
+++....|..|..+|...... |.+++++-. ++.+...++..|.+++..+.. + .
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd~~-~-~--------------------- 94 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGDAT-D-P--------------------- 94 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECCTT-C-H---------------------
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcCCC-C-H---------------------
Confidence 466667899999999999888 998887733 446666666667665544321 0 0
Q ss_pred CCCCcchhhhhhchHHHHHhhh--CCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 103 FENPANPKIHYETTGPELWKGS--GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~--~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
|.+++. ....|.||++++.-....-+...++..++..+|+..
T Consensus 95 ----------------~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 95 ----------------DFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp ----------------HHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ----------------HHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 111111 135788888887755555555566666767777654
No 108
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=84.75 E-value=5.1 Score=34.83 Aligned_cols=56 Identities=20% Similarity=0.167 Sum_probs=40.9
Q ss_pred HHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCC-eEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 13 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 13 ~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl-~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
.+...+++|.+.+|. .+|.-|..++..|+.+|. +++++.. ++.|++.++.+|++.+
T Consensus 188 ~~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~v 244 (376)
T 1e3i_A 188 INTAKVTPGSTCAVF-GLGCVGLSAIIGCKIAGASRIIAIDI---NGEKFPKAKALGATDC 244 (376)
T ss_dssp HTTSCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECS---CGGGHHHHHHTTCSEE
T ss_pred HHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCcEE
Confidence 356778898665555 479999999999999998 4444422 3467777888998644
No 109
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=84.63 E-value=3.4 Score=32.75 Aligned_cols=66 Identities=17% Similarity=0.193 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe-------C--CCCCHHHHHHHHHcCCEEEEe
Q 023801 4 IGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-------P--ASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 4 ~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv-------p--~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.....+.+|.+.|- + ..||.+|+|.++..++-.. -| +.++|. | ...++..++.++..|.+|+..
T Consensus 39 tl~la~era~e~~I-k---~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~ 111 (206)
T 1t57_A 39 VLELVGERADQLGI-R---NFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALLERGVNVYAG 111 (206)
T ss_dssp HHHHHHHHHHHHTC-C---EEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEECC
T ss_pred HHHHHHHHHHHcCC-C---EEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEe
Confidence 44556777888774 2 4445556698886665532 34 777765 3 245789999999999999887
Q ss_pred CC
Q 023801 75 DP 76 (277)
Q Consensus 75 ~~ 76 (277)
..
T Consensus 112 tH 113 (206)
T 1t57_A 112 SH 113 (206)
T ss_dssp SC
T ss_pred ec
Confidence 64
No 110
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.68 E-value=4.1 Score=35.46 Aligned_cols=59 Identities=22% Similarity=0.165 Sum_probs=41.6
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
.++++..+++|.+.+|. .+|.-|..++..|+.+|.+++++.. ++.+++.++.+|++.++
T Consensus 185 ~al~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~Vi~~~~---~~~~~~~a~~lGa~~vi 243 (369)
T 1uuf_A 185 SPLRHWQAGPGKKVGVV-GIGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVV 243 (369)
T ss_dssp HHHHHTTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEE
T ss_pred HHHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEe
Confidence 34444567888665555 5688999999999999998555443 34567777788987554
No 111
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=83.14 E-value=4.8 Score=35.00 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=40.2
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+.+.+++|.+.+|.. +|.-|..++..|+.+|.+-++.+. .++.|++.++.+|++.+
T Consensus 185 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~v 240 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVD--INKDKFAKAKEVGATEC 240 (374)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCceE
Confidence 567788986655554 799999999999999984333332 23466777788898643
No 112
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=82.88 E-value=5.2 Score=34.75 Aligned_cols=55 Identities=15% Similarity=0.244 Sum_probs=40.5
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCe-EEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~-~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+...+++|.+.+|.. +|.-|..++..|+.+|.+ ++++. .++.|++.++.+|++.+
T Consensus 186 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~---~~~~~~~~~~~lGa~~v 241 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVD---LNPDKFEKAKVFGATDF 241 (374)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC---SCGGGHHHHHHTTCCEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHhCCceE
Confidence 567788986655554 799999999999999984 44442 24467777888998644
No 113
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=82.01 E-value=19 Score=29.27 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=26.2
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEe
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 161 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~ 161 (277)
+.||+|||. +.....|+..++++.+ .++.|+|.+
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 228 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFN 228 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEec
Confidence 468999976 5667779999999876 356788875
No 114
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=80.76 E-value=7.7 Score=33.10 Aligned_cols=60 Identities=23% Similarity=0.115 Sum_probs=46.2
Q ss_pred HcCCCCCCCcEEEeeCC---chHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHHHcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs---GN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~~~Ga~v~~~~ 75 (277)
+.|.++ | .+|+-... +|.++|++.+++++|++++++-|++- ++.-+..++..|+++..+.
T Consensus 149 ~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 149 EFGRID-G-LKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETT 213 (308)
T ss_dssp HSSCSS-S-EEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred HhCCCC-C-eEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEc
Confidence 457654 4 45666666 58999999999999999999999854 4445666778899987776
No 115
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=80.55 E-value=12 Score=30.56 Aligned_cols=73 Identities=16% Similarity=0.183 Sum_probs=37.5
Q ss_pred CCcEEEeeCCch--HHHHHHHHHHHCCCeEEEEeCCCCCHHH-HHHHHHcC---CEEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLER-RIILRAFG---AELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN--~g~a~A~aa~~~Gl~~~vvvp~~~~~~~-~~~~~~~G---a~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
|+..|||..+|+ -|+++|..-.+.|.++++.-........ .+.++..| +..+.+|- .+.++..+..++..++.
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDV-QSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccC-CCHHHHHHHHHHHHHHh
Confidence 336677765553 6777787788888887665443222222 23333333 23334443 23344444444444443
No 116
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=80.54 E-value=24 Score=29.52 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=28.9
Q ss_pred hHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC-CCcEEEEEe
Q 023801 116 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIE 161 (277)
Q Consensus 116 ~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~-~~~~vigV~ 161 (277)
...+++++ .+.||+|||. +.....|+..++++.+ .++.|+|.+
T Consensus 224 ~~~~~l~~-~~~~~ai~~~--nd~~A~g~~~al~~~g~~di~vvg~D 267 (342)
T 1jx6_A 224 AAKASLAK-HPDVDFIYAC--STDVALGAVDALAELGREDIMINGWG 267 (342)
T ss_dssp HHHHHHHH-CCCCSEEEES--SHHHHHHHHHHHHHHTCTTSEEBCSB
T ss_pred HHHHHHHh-CCCccEEEEC--CChhHHHHHHHHHHcCCCCcEEEEeC
Confidence 33455554 3569999975 5667789999998876 355665554
No 117
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=80.51 E-value=5.2 Score=34.69 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=39.9
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCe-EEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~-~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+...+++|.+.+|.. +|.-|..++..|+.+|.+ ++++.. ++.|++.++.+|++.+
T Consensus 184 ~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~v 239 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDI---NKDKFARAKEFGATEC 239 (373)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECS---CGGGHHHHHHHTCSEE
T ss_pred hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHcCCceE
Confidence 567788986655554 699999999999999984 444422 3466777788888643
No 118
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=80.40 E-value=6.2 Score=33.78 Aligned_cols=51 Identities=16% Similarity=0.136 Sum_probs=37.5
Q ss_pred CCCCCCcEEEeeCCchHHHHHHHHHHHC--CCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 17 LITPGESVLIEPTSGNTGIGLAFMAAAK--QYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 17 ~l~~g~~~vv~aSsGN~g~a~A~aa~~~--Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
.+ +|.+.+|.. .|.-|..++..|+.+ |.+++++. .++.|++.++.+|++.+
T Consensus 168 ~~-~g~~VlV~G-aG~vG~~aiqlak~~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~v 220 (344)
T 2h6e_A 168 KF-AEPVVIVNG-IGGLAVYTIQILKALMKNITIVGIS---RSKKHRDFALELGADYV 220 (344)
T ss_dssp TC-SSCEEEEEC-CSHHHHHHHHHHHHHCTTCEEEEEC---SCHHHHHHHHHHTCSEE
T ss_pred CC-CCCEEEEEC-CCHHHHHHHHHHHHhcCCCEEEEEe---CCHHHHHHHHHhCCCEE
Confidence 56 786655555 499999999999999 98744442 25678888888998654
No 119
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=80.29 E-value=7.4 Score=33.69 Aligned_cols=57 Identities=19% Similarity=0.244 Sum_probs=41.7
Q ss_pred HcCCCC-----CCCcEEEeeCCchHHHHHHHHHHH-CCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 14 AKGLIT-----PGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 14 ~~g~l~-----~g~~~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
+...++ +|.+.+|...+|.-|.+++..|+. .|.+++++.+ ++.|++.++.+|++.++
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~lGad~vi 222 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSLGAHHVI 222 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHTTCSEEE
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 556666 775555555699999999999997 5877666532 45788888889987554
No 120
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=80.06 E-value=23 Score=28.88 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=26.7
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEe
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 161 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~ 161 (277)
+.||+||| .+...+.|+..++++.+ .++.|+|++
T Consensus 185 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d 222 (291)
T 3egc_A 185 DRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSFD 222 (291)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEES
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEec
Confidence 56999997 45667789999999876 367888886
No 121
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=80.02 E-value=7.7 Score=28.20 Aligned_cols=49 Identities=24% Similarity=0.248 Sum_probs=36.0
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
+++....|..|.++|......|.+++++-. .+.+.+.++..|.+++..+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd 56 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIAD 56 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECC
Confidence 366677799999999999999998887743 4566666666666555444
No 122
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=79.91 E-value=11 Score=31.00 Aligned_cols=74 Identities=7% Similarity=-0.034 Sum_probs=51.3
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
|+..|||..++--|+++|..-.+.|.+++++-.........+.++..|.+++.+.- -.+.++..+...+..++.
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 44778999999999999999999999988877665556666777777766655432 124444445555555554
No 123
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=79.82 E-value=15 Score=31.24 Aligned_cols=60 Identities=18% Similarity=0.205 Sum_probs=44.2
Q ss_pred HcCCCCCCCcEEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHH----HcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~~~ 75 (277)
+.|.++ | .+|+-... +|.++|++.+++++|++++++-|++- ++.-+..++ ..|+++..+.
T Consensus 142 ~~g~l~-g-l~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 209 (307)
T 2i6u_A 142 RKGALR-G-LRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA 209 (307)
T ss_dssp HHSCCT-T-CEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-C-eEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 457654 4 34666666 49999999999999999999999865 332333333 7899888876
No 124
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=79.81 E-value=23 Score=28.79 Aligned_cols=42 Identities=17% Similarity=0.152 Sum_probs=30.4
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC-CcEEEEEec
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP-NIKLYGIEP 162 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~-~~~vigV~~ 162 (277)
.+++++- +.||+|||. +...+.|+..++++.+. ++.|+|.+-
T Consensus 187 ~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d~ 229 (293)
T 3l6u_A 187 RQVIDSG-IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGIDG 229 (293)
T ss_dssp HHHHHTT-CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred HHHHHhC-CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEecC
Confidence 3444443 568999986 55677799999998765 778888863
No 125
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=79.73 E-value=15 Score=31.54 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=44.1
Q ss_pred HcCCCCCCCcEEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHH----HcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~~~ 75 (277)
+.|.++ | .+|+-... +|.++|++.+++++|++++++-|++- ++.-+..++ ..|+++..+.
T Consensus 161 ~~g~l~-g-l~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 228 (325)
T 1vlv_A 161 NFGRLK-G-VKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTS 228 (325)
T ss_dssp HHSCST-T-CEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEES
T ss_pred HhCCcC-C-cEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 457654 4 34666666 49999999999999999999999854 333333333 7899988886
No 126
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=79.69 E-value=12 Score=31.93 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=46.1
Q ss_pred HcCCCCCCCcEEEeeCC---chHHHHHHHHHHHC-CCeEEEEeCCCC--CHHHHHHHHHcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAK-QYRLIITMPASM--SLERRIILRAFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs---GN~g~a~A~aa~~~-Gl~~~vvvp~~~--~~~~~~~~~~~Ga~v~~~~ 75 (277)
+.|.++ | .+|+-... +|.++|++.+++++ |++++++.|+.- ++.-+..++..|+++..+.
T Consensus 145 ~~g~l~-g-lkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 145 EIGRID-G-IKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp HHSCST-T-CEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred HhCCcC-C-CEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 456654 4 34666555 68899999999999 999999999853 5555666778899987775
No 127
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=79.38 E-value=19 Score=28.73 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=24.4
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|...||+..+|--|+++|..-.+.|.+++++-
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~ 45 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLG 45 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 34678888888889998888888887765543
No 128
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=79.02 E-value=6.5 Score=33.92 Aligned_cols=59 Identities=17% Similarity=0.050 Sum_probs=40.2
Q ss_pred HHHHcCCCC-CCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH-HcCCEEEE
Q 023801 11 DAEAKGLIT-PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVL 73 (277)
Q Consensus 11 ~a~~~g~l~-~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~-~~Ga~v~~ 73 (277)
+++++..++ +|.+.+|. .+|.-|..++..|+.+|.+++++... +.+++.++ .+|++.++
T Consensus 170 ~~l~~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 170 SPLSHFGLKQPGLRGGIL-GLGGVGHMGVKIAKAMGHHVTVISSS---NKKREEALQDLGADDYV 230 (357)
T ss_dssp HHHHHTSTTSTTCEEEEE-CCSHHHHHHHHHHHHHTCEEEEEESS---TTHHHHHHTTSCCSCEE
T ss_pred HHHHhcCCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHcCCceee
Confidence 344445567 88665555 47999999999999999876555443 24555655 88886443
No 129
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=78.96 E-value=26 Score=28.86 Aligned_cols=147 Identities=10% Similarity=0.046 Sum_probs=73.9
Q ss_pred HHHHHHHcCCCCCCCcEEEeeCCchHHHH--HHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCC-------
Q 023801 8 MISDAEAKGLITPGESVLIEPTSGNTGIG--LAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAK------- 78 (277)
Q Consensus 8 ~v~~a~~~g~l~~g~~~vv~aSsGN~g~a--~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~------- 78 (277)
+-..+.+.|. ..++..+..+.-.. +--.....++..+|++|...+...+..++..|--++.++...
T Consensus 49 i~~~a~~~g~-----~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~~~~~~~~~~ 123 (305)
T 3huu_A 49 INQACNVRGY-----STRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGKSLNYENIIH 123 (305)
T ss_dssp HHHHHHHHTC-----EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESCCCSSTTCCE
T ss_pred HHHHHHHCCC-----EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECCCCcccCCcE
Confidence 3344555665 43443333433322 222233457888888876555566677777788887776421
Q ss_pred ---ChHH-HHHHHHHHHHhCC-CeEecCC-CCCCcc--hhhhhhch------------------HHHHHhhh----CCCC
Q 023801 79 ---GMKG-AVQKAEEILAKTP-NAYMLQQ-FENPAN--PKIHYETT------------------GPELWKGS----GGRI 128 (277)
Q Consensus 79 ---~~~~-~~~~a~~~~~~~~-~~~~~~~-~~~~~~--~~~g~~t~------------------~~Ei~~Q~----~~~~ 128 (277)
+... ....++.+.+... ...++.. .+++.. ...||... +.+.++++ .+.|
T Consensus 124 V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 203 (305)
T 3huu_A 124 IDNDNIDAAYQLTQYLYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDVKISNDCVVIKSMNDLRDFIKQYCIDASHMP 203 (305)
T ss_dssp EECCHHHHHHHHHHHHHHTTCCSEEEEEESSCBHHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHHHC--------CCC
T ss_pred EEeCHHHHHHHHHHHHHHCCCCeEEEEcCCcccchhHHHHHHHHHHHHHcCCCcccEEecCcHHHHHHHHHhhhcCCCCC
Confidence 1122 2333344443321 1223321 111100 01222111 44444444 2568
Q ss_pred CEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEe
Q 023801 129 DALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 161 (277)
Q Consensus 129 d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~ 161 (277)
|+|||. +...+.|+..++++.+ .++.|+|.+
T Consensus 204 ~ai~~~--nd~~A~g~~~al~~~g~~vP~di~vig~D 238 (305)
T 3huu_A 204 SVIITS--DVMLNMQLLNVLYEYQLRIPEDIQTATFN 238 (305)
T ss_dssp SEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CEEEEC--ChHHHHHHHHHHHHcCCCCCcceEEEEEC
Confidence 999974 5667779999998876 356788876
No 130
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=78.86 E-value=16 Score=31.14 Aligned_cols=60 Identities=15% Similarity=0.178 Sum_probs=43.5
Q ss_pred HcCCCCCCCcEEEeeCC-chHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHH----HcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTS-GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs-GN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~~~ 75 (277)
+.|.++ |.+ |+-... +|.++|++.+++++|++++++-|+.- ++.-+..++ ..|+++..+.
T Consensus 149 ~~g~l~-gl~-va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 149 KKGTIK-GVK-VVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp HHSCCT-TCE-EEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HhCCcC-CcE-EEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 457664 433 444444 89999999999999999999999865 332333333 7899988886
No 131
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=78.53 E-value=26 Score=28.59 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=27.2
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEec
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEP 162 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~~ 162 (277)
+.||+|||. +...+.|+..++++.+ .++.|+|.+-
T Consensus 187 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d~ 225 (288)
T 3gv0_A 187 DRPDGIVSI--SGSSTIALVAGFEAAGVKIGEDVDIVSKQS 225 (288)
T ss_dssp SCCSEEEES--CHHHHHHHHHHHHTTTCCTTTSCEEEEEES
T ss_pred CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEEecC
Confidence 468999975 4667789999999876 3578888874
No 132
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=78.10 E-value=25 Score=28.18 Aligned_cols=42 Identities=21% Similarity=0.194 Sum_probs=30.8
Q ss_pred HHHHhhhCC-CCCEEEEecCCchhHHHHHHHHhhcC---CCcEEEEEec
Q 023801 118 PELWKGSGG-RIDALVSGIGTGGTITGAGKFLKEKN---PNIKLYGIEP 162 (277)
Q Consensus 118 ~Ei~~Q~~~-~~d~iv~pvG~Gg~~aGi~~~~~~~~---~~~~vigV~~ 162 (277)
.+++++- + .||+|||. +...+.|+..++++.+ .++.|+|.+-
T Consensus 171 ~~~l~~~-~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d~ 216 (272)
T 3o74_A 171 QQLIDDL-GGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFGD 216 (272)
T ss_dssp HHHHHHH-TSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEESC
T ss_pred HHHHhcC-CCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeCC
Confidence 4445444 4 69999985 5667789999999887 4678888863
No 133
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=77.96 E-value=27 Score=28.57 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=27.5
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEec
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEP 162 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~~ 162 (277)
+.||+|||. +...+.|+..++++.+ .++.|+|.+-
T Consensus 186 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~ 224 (294)
T 3qk7_A 186 VPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAYDG 224 (294)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEETC
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeecC
Confidence 579999975 5667789999999876 2578888863
No 134
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=76.80 E-value=22 Score=28.69 Aligned_cols=53 Identities=13% Similarity=0.209 Sum_probs=39.4
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
++.|||..+|.-|+++|..-.+.|.+++++.... .......++..|.++..+.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~ 57 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD-PAPALAEIARHGVKAVHHP 57 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC-CHHHHHHHHTTSCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHhcCCceEEEe
Confidence 3678999999999999999999999877664433 3445566666787776654
No 135
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=76.78 E-value=10 Score=32.86 Aligned_cols=59 Identities=19% Similarity=0.139 Sum_probs=39.5
Q ss_pred HHHHcCCCC-CCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH-HcCCEEEE
Q 023801 11 DAEAKGLIT-PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVL 73 (277)
Q Consensus 11 ~a~~~g~l~-~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~-~~Ga~v~~ 73 (277)
+++++..++ +|.+.+|.. +|.-|.+++..|+.+|.+++++... +.+++.++ .+|++.++
T Consensus 177 ~al~~~~~~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVTVISTS---PSKKEEALKNFGADSFL 237 (366)
T ss_dssp HHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC---GGGHHHHHHTSCCSEEE
T ss_pred HHHHhcCcCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhcCCceEE
Confidence 344444566 886655654 6999999999999999876655433 34455544 78886543
No 136
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=76.42 E-value=30 Score=28.30 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=32.5
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC-CHHHHHHHHHcCCEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTD 75 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~-~~~~~~~~~~~Ga~v~~~~ 75 (277)
|...|||..+|--|+++|..-.+.|.+++++-.... .....+.++..|.++..+.
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 81 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVA 81 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 336788888888899999888888877555322110 0112233444565555543
No 137
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=76.30 E-value=19 Score=31.13 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=42.8
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHH----HHcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIIL----RAFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~----~~~Ga~v~~~~ 75 (277)
+.|.++ |.+..++.=.+|.++|++.+++++|++++++-|++- ++.-+..+ +..|+.+..+.
T Consensus 173 ~~G~l~-glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~ 239 (340)
T 4ep1_A 173 ETNTFK-GIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH 239 (340)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES
T ss_pred HhCCCC-CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 457654 434333333489999999999999999999999854 33333333 46798888876
No 138
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=76.15 E-value=16 Score=31.83 Aligned_cols=60 Identities=27% Similarity=0.297 Sum_probs=44.1
Q ss_pred HcCCCCCCCcEEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHH----HcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~~~ 75 (277)
+.|.|+ | .+|+-... .|.++|++.+++++|++++++-|+.- ++.-+..++ ..|+++..+.
T Consensus 170 ~~g~l~-g-l~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~ 237 (359)
T 2w37_A 170 NFGKLQ-G-LTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD 237 (359)
T ss_dssp HHSCCT-T-CEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-C-eEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 457654 4 34666666 49999999999999999999999854 333333333 7899888886
No 139
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=76.00 E-value=18 Score=32.47 Aligned_cols=62 Identities=13% Similarity=-0.098 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe--------CCCCCHHHHHHH
Q 023801 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM--------PASMSLERRIIL 64 (277)
Q Consensus 3 R~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv--------p~~~~~~~~~~~ 64 (277)
|++.+.++.+++.-.....+++|+....||-|..+|.....+|-+++.+- |......++..+
T Consensus 216 ~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l 285 (450)
T 4fcc_A 216 YGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARL 285 (450)
T ss_dssp HHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHH
T ss_pred eeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHH
Confidence 56677777777644444444679999999999999999999999987653 445555555444
No 140
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=75.98 E-value=22 Score=26.61 Aligned_cols=86 Identities=13% Similarity=0.142 Sum_probs=43.0
Q ss_pred EEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCC
Q 023801 50 ITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRID 129 (277)
Q Consensus 50 vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d 129 (277)
+++...........+...|++|++...............+..++.+..+...+.+......+....+..++.++. +. |
T Consensus 22 l~~s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-d 99 (157)
T 3gxh_A 22 LLSSGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-D 99 (157)
T ss_dssp EEEEBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-C
T ss_pred eeEcCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-C
Confidence 444444556667778888999888754221111000012222333344444444321110234444555555556 45 8
Q ss_pred EEEEecCC
Q 023801 130 ALVSGIGT 137 (277)
Q Consensus 130 ~iv~pvG~ 137 (277)
.+|-+.|+
T Consensus 100 VLVnnAgg 107 (157)
T 3gxh_A 100 VLVHCLAN 107 (157)
T ss_dssp EEEECSBS
T ss_pred EEEECCCC
Confidence 88888875
No 141
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=75.90 E-value=9.3 Score=32.78 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=40.0
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCC-CeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~G-l~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
+.+.+++|.+.+|...+|.-|.+++..|+.+| .+++... +..|.+.++ +|++.++.
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~----~~~~~~~~~-~ga~~~~~ 192 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA----STFKHEAIK-DSVTHLFD 192 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE----CGGGHHHHG-GGSSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC----CHHHHHHHH-cCCcEEEc
Confidence 56788999776666667999999999999885 4444432 235666777 88866554
No 142
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=75.69 E-value=16 Score=31.08 Aligned_cols=60 Identities=17% Similarity=0.106 Sum_probs=45.6
Q ss_pred HcCCCCCCCcEEEeeCC---chHHHHHHHHHHHC-CCeEEEEeCCCC--CHHHHHHHHHcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAK-QYRLIITMPASM--SLERRIILRAFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs---GN~g~a~A~aa~~~-Gl~~~vvvp~~~--~~~~~~~~~~~Ga~v~~~~ 75 (277)
+.|.++ | .+|+-... +|.++|++.+++++ |++++++-|++- ++.-++.++..|+++..+.
T Consensus 148 ~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 148 TQGRLD-N-LHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp HHSCSS-S-CEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred HhCCcC-C-cEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence 457664 4 34666666 58999999999999 999999999854 4445566778898877765
No 143
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=75.63 E-value=24 Score=28.73 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=25.3
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
.+.|||..+|--|+++|..-.+.|.+++++-.
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 36788888888999999988888888666543
No 144
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=75.60 E-value=30 Score=28.17 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=27.0
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
+...|||..+|.-|+++|..-.+.|.+++++..
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 346789999999999999999889988766543
No 145
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=75.59 E-value=29 Score=27.74 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=29.0
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC--CCcEEEEEe
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN--PNIKLYGIE 161 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~--~~~~vigV~ 161 (277)
.+++++. ++||+|||. +.....|+..++++.+ .++.|+|.+
T Consensus 179 ~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~p~di~vig~d 221 (276)
T 3ksm_A 179 LRLLKET-PTIDGLFTP--NESTTIGALVAIRQSGMSKQFGFIGFD 221 (276)
T ss_dssp HHHHHHC-SCCCEEECC--SHHHHHHHHHHHHHTTCTTSSEEEEES
T ss_pred HHHHHhC-CCceEEEEC--CchhhhHHHHHHHHcCCCCCeEEEEeC
Confidence 4444443 578999876 5567789999998876 357777775
No 146
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=75.58 E-value=35 Score=28.57 Aligned_cols=41 Identities=27% Similarity=0.447 Sum_probs=29.9
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEe
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 161 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~ 161 (277)
.+++++ .+.||+|||. +.....|+..++++.+ .++.|+|.+
T Consensus 234 ~~ll~~-~~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vvg~D 278 (338)
T 3dbi_A 234 EMLLER-GAKFSALVAS--NDDMAIGAMKALHERGVAVPEQVSVIGFD 278 (338)
T ss_dssp HHHHHT-TCCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred HHHHcC-CCCCeEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEEEC
Confidence 344443 3579999984 5667779999999876 357888887
No 147
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=75.45 E-value=44 Score=30.10 Aligned_cols=97 Identities=16% Similarity=0.134 Sum_probs=63.3
Q ss_pred CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023801 16 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 95 (277)
Q Consensus 16 g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 95 (277)
+..-.| ++++....|+-|+++|..++.+|.+++++- ..+.+.......|.++. ++++ +.++-
T Consensus 242 g~~L~G-KTVgVIG~G~IGr~vA~~lrafGa~Viv~d---~dp~~a~~A~~~G~~vv------~LeE-------lL~~A- 303 (464)
T 3n58_A 242 DVMMAG-KVAVVCGYGDVGKGSAQSLAGAGARVKVTE---VDPICALQAAMDGFEVV------TLDD-------AASTA- 303 (464)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEEC---SSHHHHHHHHHTTCEEC------CHHH-------HGGGC-
T ss_pred CCcccC-CEEEEECcCHHHHHHHHHHHHCCCEEEEEe---CCcchhhHHHhcCceec------cHHH-------HHhhC-
Confidence 444455 568999999999999999999999876652 23444444456787652 1222 22332
Q ss_pred CeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 023801 96 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 140 (277)
Q Consensus 96 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~ 140 (277)
+.+..... + ...+..|.+++| ++..|++-+|.|..
T Consensus 304 DIVv~atg-t-------~~lI~~e~l~~M--K~GAILINvGRgdv 338 (464)
T 3n58_A 304 DIVVTTTG-N-------KDVITIDHMRKM--KDMCIVGNIGHFDN 338 (464)
T ss_dssp SEEEECCS-S-------SSSBCHHHHHHS--CTTEEEEECSSSTT
T ss_pred CEEEECCC-C-------ccccCHHHHhcC--CCCeEEEEcCCCCc
Confidence 55543221 1 234556888888 58999999999874
No 148
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=75.38 E-value=27 Score=28.33 Aligned_cols=32 Identities=25% Similarity=0.175 Sum_probs=26.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
...||+..+|.-|+++|..-.+.|.+++++-.
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 36789999999999999988888888666543
No 149
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=75.28 E-value=13 Score=32.15 Aligned_cols=59 Identities=20% Similarity=0.218 Sum_probs=43.2
Q ss_pred cC-CCCCCCcEEEeeCCc--hHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHH----HcCCEEEEeC
Q 023801 15 KG-LITPGESVLIEPTSG--NTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 75 (277)
Q Consensus 15 ~g-~l~~g~~~vv~aSsG--N~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~~~ 75 (277)
.| .++ | .+|+-...| |.++|++.+++++|++++++-|+.- ++.-+..++ ..|+++..+.
T Consensus 149 ~g~~l~-g-l~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (333)
T 1duv_G 149 PGKAFN-E-MTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTE 216 (333)
T ss_dssp TTCCGG-G-CEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred cCCCCC-C-cEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 46 543 3 346666664 9999999999999999999999854 333333333 7899998886
No 150
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=74.89 E-value=37 Score=28.56 Aligned_cols=44 Identities=16% Similarity=0.210 Sum_probs=30.9
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEecC
Q 023801 117 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIEPT 163 (277)
Q Consensus 117 ~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~~~ 163 (277)
..+++++- ++||+|||. +...+.|+..++++.+. ++.|+|++-.
T Consensus 196 ~~~~L~~~-~~~~aI~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~d~~ 243 (350)
T 3h75_A 196 AQQLLKRY-PKTQLVWSA--NDEMALGAMQAARELGRKPGTDLLFSGVNSS 243 (350)
T ss_dssp HHHHHHHC-TTEEEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESCC
T ss_pred HHHHHHhC-CCcCEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEecCCC
Confidence 44555443 568888875 55667799999998763 5788888643
No 151
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=74.38 E-value=20 Score=31.91 Aligned_cols=88 Identities=17% Similarity=0.034 Sum_probs=55.4
Q ss_pred HHHHHHHHcCCCC-CCCcEEEeeCCchHHHHHHHHHHH-CCCeEEEEeCCCCC-H------------HHHHHHHHcCCEE
Q 023801 7 SMISDAEAKGLIT-PGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMS-L------------ERRIILRAFGAEL 71 (277)
Q Consensus 7 ~~v~~a~~~g~l~-~g~~~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp~~~~-~------------~~~~~~~~~Ga~v 71 (277)
..+.+-.++++++ .++..|||..|+--|+++|...+. .|.+++++-..... . ...+.++..|.++
T Consensus 46 ~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a 125 (422)
T 3s8m_A 46 EQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYS 125 (422)
T ss_dssp HHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcE
Confidence 4455556778874 344578888888899999999999 99998776433221 1 1235667888777
Q ss_pred EEeCC-CCChHHHHHHHHHHHHhC
Q 023801 72 VLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 72 ~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
..+.. -.+.+...+...+..++.
T Consensus 126 ~~i~~Dvtd~~~v~~~v~~i~~~~ 149 (422)
T 3s8m_A 126 KSINGDAFSDAARAQVIELIKTEM 149 (422)
T ss_dssp EEEESCTTSHHHHHHHHHHHHHHS
T ss_pred EEEEecCCCHHHHHHHHHHHHHHc
Confidence 65532 123344444555555555
No 152
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=74.18 E-value=20 Score=28.36 Aligned_cols=31 Identities=23% Similarity=0.229 Sum_probs=25.7
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
+.|||..+|.-|+++|..-.+.|.+++++..
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGAR 34 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 6788999999999999999999988666543
No 153
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=73.31 E-value=20 Score=30.56 Aligned_cols=54 Identities=24% Similarity=0.349 Sum_probs=37.4
Q ss_pred HHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCC-eEEEEeCCCCCHHHHHHHHHcCCE
Q 023801 11 DAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAE 70 (277)
Q Consensus 11 ~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl-~~~vvvp~~~~~~~~~~~~~~Ga~ 70 (277)
++++ ...+ +|.+.+|... |.-|.+++..|+.+|. +++++.+ ++.+++.++.+ ++
T Consensus 155 ~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~l-a~ 210 (343)
T 2dq4_A 155 HTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDP---NPYRLAFARPY-AD 210 (343)
T ss_dssp HHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHGGGTTT-CS
T ss_pred HHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHh-HH
Confidence 3444 6677 8866666655 9999999999999998 6665532 45666666655 54
No 154
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=73.21 E-value=21 Score=29.38 Aligned_cols=55 Identities=11% Similarity=-0.012 Sum_probs=39.9
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
|...|||..+|--|+++|..-.+.|.+++++-...........++..|.++..+.
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 85 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVV 85 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEE
Confidence 4467899999999999999999999997776633222334455666787776654
No 155
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=73.13 E-value=35 Score=27.57 Aligned_cols=44 Identities=16% Similarity=0.270 Sum_probs=32.8
Q ss_pred hHHHHHhhhCC---CCCEEEEecCCchhHHHHHHHHhhcCC-CcEEEEEec
Q 023801 116 TGPELWKGSGG---RIDALVSGIGTGGTITGAGKFLKEKNP-NIKLYGIEP 162 (277)
Q Consensus 116 ~~~Ei~~Q~~~---~~d~iv~pvG~Gg~~aGi~~~~~~~~~-~~~vigV~~ 162 (277)
...+++++. + .||+|||. +...+.|+..++++.+. ++.|+|.+-
T Consensus 178 ~~~~~l~~~-~~~~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vvg~d~ 225 (291)
T 3l49_A 178 NVTDMLTKY-PNEGDVGAIWAC--WDVPMIGATQALQAAGRTDIRTYGVDG 225 (291)
T ss_dssp HHHHHHHHC-CSTTSCCEEEES--SHHHHHHHHHHHHHTTCCSCEEEEEEC
T ss_pred HHHHHHHhC-CCcCCcCEEEEC--CCchHHHHHHHHHHcCCCCeEEEEecC
Confidence 445555554 4 79999875 56778899999998875 788888863
No 156
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=73.10 E-value=13 Score=32.09 Aligned_cols=60 Identities=20% Similarity=0.181 Sum_probs=43.5
Q ss_pred HcC-CCCCCCcEEEeeCCc--hHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHH----HcCCEEEEeC
Q 023801 14 AKG-LITPGESVLIEPTSG--NTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 75 (277)
Q Consensus 14 ~~g-~l~~g~~~vv~aSsG--N~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~~~ 75 (277)
+.| .++ | .+|+-...| |.++|+..+++++|++++++-|+.- ++.-+..++ ..|+++..+.
T Consensus 148 ~~g~~l~-g-l~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (335)
T 1dxh_A 148 HSDKPLH-D-ISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTE 216 (335)
T ss_dssp TCSSCGG-G-CEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HcCCCcC-C-eEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 345 443 3 346666664 9999999999999999999999854 333333333 7899998886
No 157
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=72.66 E-value=40 Score=27.96 Aligned_cols=42 Identities=14% Similarity=0.294 Sum_probs=28.5
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC-CCcEEEEEe
Q 023801 117 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIE 161 (277)
Q Consensus 117 ~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~-~~~~vigV~ 161 (277)
..+++++. ++||+|||+ +.....|+..++++.+ .++.|+|.+
T Consensus 180 ~~~ll~~~-~~~~aI~~~--nD~~A~g~~~al~~~G~~dv~VvG~D 222 (316)
T 1tjy_A 180 AEGIIKAY-PDLDAIIAP--DANALPAAAQAAENLKRNNLAIVGFS 222 (316)
T ss_dssp HHHHHHHC-SSCCEEEEC--STTHHHHHHHHHHHTTCCSCEEEEBC
T ss_pred HHHHHHhC-CCCCEEEEC--CCccHHHHHHHHHHcCCCCEEEEEeC
Confidence 34444443 568999986 4456788889988876 446777764
No 158
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=72.65 E-value=37 Score=27.53 Aligned_cols=31 Identities=6% Similarity=0.060 Sum_probs=25.5
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
...|||..+|--|+++|..-.+.|.+++++-
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~ 39 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCA 39 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3678888899999999999988898866653
No 159
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=72.56 E-value=29 Score=28.24 Aligned_cols=69 Identities=22% Similarity=0.215 Sum_probs=48.4
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
+.|||..+|--|+++|..-.+.|.+++++-.... .....++..+...+.+|-. +.++..+...+..++.
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEH--ASVTELRQAGAVALYGDFS-CETGIMAFIDLLKTQT 97 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC--HHHHHHHHHTCEEEECCTT-SHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHhcCCeEEECCCC-CHHHHHHHHHHHHHhc
Confidence 6789999999999999999999999777654432 2245566678888777753 4445555555555554
No 160
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=72.54 E-value=32 Score=28.89 Aligned_cols=145 Identities=8% Similarity=0.059 Sum_probs=74.3
Q ss_pred HHHHHHHH-HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC--------------CC---H--HHHHHHH
Q 023801 6 YSMISDAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS--------------MS---L--ERRIILR 65 (277)
Q Consensus 6 ~~~v~~a~-~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~--------------~~---~--~~~~~~~ 65 (277)
...+.+++ +.+. ..|+...+.....+++-.+...++|++.+.... .+ . .-.+.+.
T Consensus 61 ~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 135 (358)
T 3hut_A 61 RTIARAFVDDPRV-----VGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMI 135 (358)
T ss_dssp HHHHHHHHHCTTE-----EEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHH
T ss_pred HHHHHHHhccCCc-----EEEEcCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHH
Confidence 34455555 3333 456655666677777888888999987652100 01 1 1133344
Q ss_pred HcCC-EEEEeCCCCChH-HHHHHHHHHHHhCCCeEecC-CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH
Q 023801 66 AFGA-ELVLTDPAKGMK-GAVQKAEEILAKTPNAYMLQ-QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT 142 (277)
Q Consensus 66 ~~Ga-~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a 142 (277)
..|. +|.++.....+. +..+..++..++.+...... .+. +. ...+.....+|.+ ..||+||++ +.+..+.
T Consensus 136 ~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~--~~~~~~~~~~l~~---~~~d~i~~~-~~~~~a~ 208 (358)
T 3hut_A 136 GDGFTSVAVIGVTTDWGLSSAQAFRKAFELRGGAVVVNEEVP-PG--NRRFDDVIDEIED---EAPQAIYLA-MAYEDAA 208 (358)
T ss_dssp HTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEEC-TT--CCCCHHHHHHHHH---HCCSEEEEE-SCHHHHH
T ss_pred HcCCCEEEEEecCcHHHHHHHHHHHHHHHHcCCEEEEEEecC-CC--CccHHHHHHHHHh---cCCCEEEEc-cCchHHH
Confidence 4564 454443212222 23333344445542221110 111 00 0112222233332 358988886 4555788
Q ss_pred HHHHHHhhcCCCcEEEEEec
Q 023801 143 GAGKFLKEKNPNIKLYGIEP 162 (277)
Q Consensus 143 Gi~~~~~~~~~~~~vigV~~ 162 (277)
++.+.+++.+.++++++...
T Consensus 209 ~~~~~~~~~g~~~p~~~~~~ 228 (358)
T 3hut_A 209 PFLRALRARGSALPVYGSSA 228 (358)
T ss_dssp HHHHHHHHTTCCCCEEECGG
T ss_pred HHHHHHHHcCCCCcEEecCc
Confidence 99999999887788887654
No 161
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=72.42 E-value=38 Score=27.58 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=28.0
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEecC
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEPT 163 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~~~ 163 (277)
+.||+|||. +...+.|+..++++.+ .++.|+|.+-.
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~~ 223 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDDS 223 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCH
Confidence 569999986 5567789999999876 36789998743
No 162
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=72.33 E-value=23 Score=30.68 Aligned_cols=116 Identities=12% Similarity=0.030 Sum_probs=72.2
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-.-|+-|+++|..++.+|++++++-+. .+.......|.+. ++ +.+ ++.++- +...++-
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~----~~~~~~~~~g~~~--~~---~l~-------ell~~a-DiV~l~~ 223 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE----NSKERARADGFAV--AE---SKD-------ALFEQS-DVLSVHL 223 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSH----HHHHHHHHTTCEE--CS---SHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCC----CCHHHHHhcCceE--eC---CHH-------HHHhhC-CEEEEec
Confidence 46888899999999999999999998887443 2344556678752 22 222 233343 4554433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhhcCCCcEEEEEecC
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKEKNPNIKLYGIEPT 163 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~~~~~~~vigV~~~ 163 (277)
-.++.. ...+..+.+.++ +++.+++-+|.|+..- .++.++++.. ..=.+.+..
T Consensus 224 Plt~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g~--i~gA~lDV~ 278 (352)
T 3gg9_A 224 RLNDET----RSIITVADLTRM--KPTALFVNTSRAELVEENGMVTALNRGR--PGMAAIDVF 278 (352)
T ss_dssp CCSTTT----TTCBCHHHHTTS--CTTCEEEECSCGGGBCTTHHHHHHHHTS--SSEEEECCC
T ss_pred cCcHHH----HHhhCHHHHhhC--CCCcEEEECCCchhhcHHHHHHHHHhCC--ccEEEeccc
Confidence 223222 233455777777 5789999999998653 4556666532 333455443
No 163
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=72.23 E-value=33 Score=28.21 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=26.7
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
+.+.||+..+|.-|+++|..-.+.|.+++++..
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r 58 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR 58 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 346789999999999999998888988666543
No 164
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=72.05 E-value=12 Score=32.25 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=37.8
Q ss_pred HHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHc
Q 023801 11 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAF 67 (277)
Q Consensus 11 ~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~ 67 (277)
+++++..+++|.+.+|. .+|.-|.+....|+.+|.+.++++. .++.|++.++.+
T Consensus 170 ~~l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~l 223 (363)
T 3m6i_A 170 AGLQRAGVRLGDPVLIC-GAGPIGLITMLCAKAAGACPLVITD--IDEGRLKFAKEI 223 (363)
T ss_dssp HHHHHHTCCTTCCEEEE-CCSHHHHHHHHHHHHTTCCSEEEEE--SCHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHh
Confidence 34456678888776665 4599999999999999987333332 245677777666
No 165
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=71.67 E-value=18 Score=29.95 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=24.2
Q ss_pred cEEEeeCCchHH---HHHHHHHHHCCCeEEEEeCC
Q 023801 23 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPA 54 (277)
Q Consensus 23 ~~vv~aSsGN~g---~a~A~aa~~~Gl~~~vvvp~ 54 (277)
+.+|.+..||.| ..+|..-+..|+++.|+++.
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 567888888876 55666666679999998764
No 166
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=71.36 E-value=38 Score=27.22 Aligned_cols=35 Identities=6% Similarity=-0.145 Sum_probs=26.0
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEec
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIEP 162 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~~ 162 (277)
+.||+|||. +...+.|+..++++.+. ++.|+|.+-
T Consensus 180 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d~ 218 (276)
T 3jy6_A 180 DQKTVAFAL--KERWLLEFFPNLIISGLIDNQTVTATGFAD 218 (276)
T ss_dssp SSCEEEEES--SHHHHHHHSHHHHHSSSCCSSSEEEEEBCC
T ss_pred CCCcEEEEe--CcHHHHHHHHHHHHcCCCCCCcEEEEEECC
Confidence 568999874 56677799999998762 567887753
No 167
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=71.35 E-value=23 Score=30.10 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=24.4
Q ss_pred cEEEeeCCchHH---HHHHHHHHHCCCeEEEEeCC
Q 023801 23 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPA 54 (277)
Q Consensus 23 ~~vv~aSsGN~g---~a~A~aa~~~Gl~~~vvvp~ 54 (277)
+.+|.+..||.| ..+|..-+..|+++.|+++.
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 567888888876 56666666679999998775
No 168
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=71.34 E-value=31 Score=29.09 Aligned_cols=104 Identities=15% Similarity=0.155 Sum_probs=67.0
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-..|+-|.++|..++.+|++++++-+.. .. ...+.+|++. + +.+ ++.++- +...++-
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 204 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYP-NE---ERAKEVNGKF--V----DLE-------TLLKES-DVVTIHV 204 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHTTCEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCC-Ch---hhHhhcCccc--c----CHH-------HHHhhC-CEEEEec
Confidence 467888999999999999999999987775543 22 2345678753 1 222 233333 5554443
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhh
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 150 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~ 150 (277)
..++.. ...+..+.++++ +++.+++-+|+|+..- .+..+++.
T Consensus 205 p~~~~t----~~li~~~~l~~m--k~ga~lin~arg~~vd~~aL~~aL~~ 248 (307)
T 1wwk_A 205 PLVEST----YHLINEERLKLM--KKTAILINTSRGPVVDTNALVKALKE 248 (307)
T ss_dssp CCSTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH----hhhcCHHHHhcC--CCCeEEEECCCCcccCHHHHHHHHHh
Confidence 222222 223445777777 5789999999998755 66777765
No 169
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=71.27 E-value=21 Score=31.79 Aligned_cols=51 Identities=16% Similarity=0.219 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC
Q 023801 3 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 54 (277)
Q Consensus 3 R~a~~~v~~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~ 54 (277)
|++++.++.+++ .|.--+| .+|+....||-|..+|-...++|.+++.+...
T Consensus 199 ~Gv~~~~~~~~~~~g~~l~g-k~vaVqG~GnVG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 199 LGALLVLEALAKRRGLDLRG-ARVVVQGLGQVGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp HHHHHHHHHHHHHHTCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHHHHhcCCCccC-CEEEEECcCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 567777777765 4432234 56888999999999999999999888866543
No 170
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=71.06 E-value=40 Score=27.28 Aligned_cols=42 Identities=21% Similarity=0.291 Sum_probs=30.0
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC-CcEEEEEe
Q 023801 117 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP-NIKLYGIE 161 (277)
Q Consensus 117 ~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~-~~~vigV~ 161 (277)
..+++++ .+.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 174 ~~~ll~~-~~~~~ai~~~--nD~~A~g~~~al~~~G~~di~viG~D 216 (283)
T 2ioy_A 174 MENILQA-QPKIDAVFAQ--NDEMALGAIKAIEAANRQGIIVVGFD 216 (283)
T ss_dssp HHHHHHH-CSCCCEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHHh-CCCccEEEEC--CchHHHHHHHHHHHCCCCCcEEEEeC
Confidence 3455544 3568999876 44567899999988764 78888886
No 171
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=70.56 E-value=38 Score=28.62 Aligned_cols=104 Identities=10% Similarity=0.095 Sum_probs=66.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-..||-|.++|..++.+|++++++-+.. ... ..+.+|++. . +.+ ++.++- +...++-
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l~-------ell~~a-DvVvl~~ 204 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILD-IRE---KAEKINAKA--V----SLE-------ELLKNS-DVISLHV 204 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSC-CHH---HHHHTTCEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCc-chh---HHHhcCcee--c----CHH-------HHHhhC-CEEEEec
Confidence 467788999999999999999999987775543 222 246678763 2 222 233333 4554433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhh
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 150 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~ 150 (277)
-.++.. ...+..+.++++ +++.+++-+|+|+..- .+..++++
T Consensus 205 P~~~~t----~~li~~~~l~~m--k~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 205 TVSKDA----KPIIDYPQFELM--KDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp CCCTTS----CCSBCHHHHHHS--CTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred cCChHH----HHhhCHHHHhcC--CCCCEEEECCCCcccCHHHHHHHHHc
Confidence 222222 122335667777 5789999999998766 55666654
No 172
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=70.18 E-value=41 Score=27.07 Aligned_cols=24 Identities=17% Similarity=0.142 Sum_probs=15.5
Q ss_pred CCCEEEEecCCchhHHHHHHHHhhcC
Q 023801 127 RIDALVSGIGTGGTITGAGKFLKEKN 152 (277)
Q Consensus 127 ~~d~iv~pvG~Gg~~aGi~~~~~~~~ 152 (277)
.||+|||. +...+.|+..++++.+
T Consensus 177 ~~~ai~~~--~d~~a~g~~~al~~~g 200 (277)
T 3cs3_A 177 EPVDVFAF--NDEMAIGVYKYVAETN 200 (277)
T ss_dssp SSEEEEES--SHHHHHHHHHHHTTSS
T ss_pred CCcEEEEc--ChHHHHHHHHHHHHcC
Confidence 46777764 4555667777777654
No 173
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=70.08 E-value=37 Score=26.57 Aligned_cols=49 Identities=18% Similarity=0.122 Sum_probs=35.4
Q ss_pred EEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH-HcCCEEEEeCC
Q 023801 25 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVLTDP 76 (277)
Q Consensus 25 vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~-~~Ga~v~~~~~ 76 (277)
++....|+.|..+|..-...|.+++++-. .+.+...+. .+|.+++.-+.
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~l~~~~~~~~i~gd~ 52 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINK---DRELCEEFAKKLKATIIHGDG 52 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHHSSSEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHHcCCeEEEcCC
Confidence 55666899999999999999999888743 445555543 46777665553
No 174
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=70.05 E-value=26 Score=30.04 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=70.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-.-|+-|+++|..++.+|++++++-+...+ . . ...|.+. + +.+ ++.++- +...++-
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~-~---~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 202 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE-D-L---KEKGCVY--T----SLD-------ELLKES-DVISLHV 202 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-H-H---HHTTCEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcch-h-h---HhcCcee--c----CHH-------HHHhhC-CEEEEeC
Confidence 46888899999999999999999998887655422 2 1 1356643 2 122 233443 5555443
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHhhcCCCcEEEEEecC
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEPT 163 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~--aGi~~~~~~~~~~~~vigV~~~ 163 (277)
-.++.+ +..+..+.++++ ++..+++-+|.|+.. ..+..++++ ..+.=.+.++.
T Consensus 203 P~t~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~--g~i~gA~lDV~ 257 (334)
T 2pi1_A 203 PYTKET----HHMINEERISLM--KDGVYLINTARGKVVDTDALYRAYQR--GKFSGLGLDVF 257 (334)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT--TCEEEEEESCC
T ss_pred CCChHH----HHhhCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh--CCceEEEeecC
Confidence 323322 234556778888 589999999999864 344455544 22333345443
No 175
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=69.54 E-value=26 Score=28.31 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=46.7
Q ss_pred CCcEEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH-HcC-CEEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFG-AELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~-~~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
+++.|||..+ |.-|+++|..-.+.|.+++++........++..+. .+| ..++.+|- .+.++..+...+..++.
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDV-ADDAQIDALFASLKTHW 90 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCC-CCHHHHHHHHHHHHHHc
Confidence 4467888866 88999999999999998887765544445555553 333 33444443 34455555556665555
No 176
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=69.42 E-value=50 Score=28.68 Aligned_cols=115 Identities=15% Similarity=0.114 Sum_probs=72.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|-.-.-|+-|+++|..++.+|++++.+-|.. +. ......|++. . +.+ ++.++- +...++-
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 238 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PR---SMLEENGVEP--A----SLE-------DVLTKS-DFIFVVA 238 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CH---HHHHHTTCEE--C----CHH-------HHHHSC-SEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CH---HHHhhcCeee--C----CHH-------HHHhcC-CEEEEcC
Confidence 468888999999999999999999988876552 22 3345577752 1 222 334443 5555433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhhcCCCcEEEEEecCC
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKEKNPNIKLYGIEPTE 164 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~~~~~~~vigV~~~~ 164 (277)
-.++.. ...+..+.++++ +++.+++-+|.|+..- .++.+++. ..+. .|.+...
T Consensus 239 Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~--g~i~-aaLDV~~ 293 (365)
T 4hy3_A 239 AVTSEN----KRFLGAEAFSSM--RRGAAFILLSRADVVDFDALMAAVSS--GHIV-AASDVYP 293 (365)
T ss_dssp CSSCC-------CCCHHHHHTS--CTTCEEEECSCGGGSCHHHHHHHHHT--TSSE-EEESCCS
T ss_pred cCCHHH----HhhcCHHHHhcC--CCCcEEEECcCCchhCHHHHHHHHHc--CCce-EEeeCCC
Confidence 233322 233556788887 5789999999998763 45555554 3355 5665543
No 177
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=69.14 E-value=45 Score=27.17 Aligned_cols=42 Identities=14% Similarity=-0.012 Sum_probs=29.4
Q ss_pred HHHHhhhC--CCCCEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEe
Q 023801 118 PELWKGSG--GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 161 (277)
Q Consensus 118 ~Ei~~Q~~--~~~d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~ 161 (277)
.+++++.. ..||+||| .+...+.|+..++++.+ .++.|+|.+
T Consensus 181 ~~~l~~~~~~~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~D 228 (295)
T 3hcw_A 181 QNLHTRLKDPNIKQAIIS--LDAMLHLAILSVLYELNIEIPKDVMTATFN 228 (295)
T ss_dssp HHHHHHHTCTTSCEEEEE--SSHHHHHHHHHHHHHTTCCTTTTEEEEEEC
T ss_pred HHHHhhcccCCCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 34444442 26899886 45667889999999876 357788886
No 178
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=69.02 E-value=44 Score=27.88 Aligned_cols=146 Identities=10% Similarity=0.052 Sum_probs=78.5
Q ss_pred HHHHHHHHHc-CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-------------CCH-----HHHHHHHH
Q 023801 6 YSMISDAEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-------------MSL-----ERRIILRA 66 (277)
Q Consensus 6 ~~~v~~a~~~-g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-------------~~~-----~~~~~~~~ 66 (277)
...+.+++++ +. ..|+-..+.....+++-.+...+++.+.+.... .+. .-.+.+..
T Consensus 58 ~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 132 (362)
T 3snr_A 58 TTNARRFVTESKA-----DVIMGSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKK 132 (362)
T ss_dssp HHHHHHHHHTSCC-----SEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCc-----eEEEcCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHh
Confidence 4456666666 44 456766666677778888889999987653110 011 11344455
Q ss_pred cCC-EEEEeCCCCChH-HHHHHHHHHHHhCCCeEec-CCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHH
Q 023801 67 FGA-ELVLTDPAKGMK-GAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 143 (277)
Q Consensus 67 ~Ga-~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aG 143 (277)
+|. +|.++.....+. +..+..++..++.+..... ..+. +. ...+.....+|.+ ..||+||+. +.+....+
T Consensus 133 ~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~--~~~~~~~~~~l~~---~~~dav~~~-~~~~~a~~ 205 (362)
T 3snr_A 133 NNVKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIVGEERFA-RP--DTSVAGQALKLVA---ANPDAILVG-ASGTAAAL 205 (362)
T ss_dssp TTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEEC-TT--CSCCHHHHHHHHH---HCCSEEEEE-CCHHHHHH
T ss_pred cCCCEEEEEecCchHHHHHHHHHHHHHHHcCCEEEEEeecC-CC--CCCHHHHHHHHHh---cCCCEEEEe-cCcchHHH
Confidence 674 555553222222 2333344444555322111 1111 00 0112222233332 358999885 45677889
Q ss_pred HHHHHhhcCCCcEEEEEecC
Q 023801 144 AGKFLKEKNPNIKLYGIEPT 163 (277)
Q Consensus 144 i~~~~~~~~~~~~vigV~~~ 163 (277)
+.+.+++.+.+++++++...
T Consensus 206 ~~~~~~~~g~~~p~i~~~g~ 225 (362)
T 3snr_A 206 PQTTLRERGYNGLIYQTHGA 225 (362)
T ss_dssp HHHHHHHTTCCSEEEECGGG
T ss_pred HHHHHHHcCCCccEEeccCc
Confidence 99999998877787766543
No 179
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=68.94 E-value=18 Score=32.69 Aligned_cols=50 Identities=8% Similarity=-0.076 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 3 R~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|++.+.++.+++.-.......+|+....||-|..+|....++|.+++.+.
T Consensus 233 ~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavs 282 (470)
T 2bma_A 233 YGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLS 282 (470)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEE
T ss_pred HHHHHHHHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEE
Confidence 56777777777633232222568899999999999999999998887554
No 180
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=68.88 E-value=12 Score=34.18 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=34.2
Q ss_pred cEEEeeCCchHH---HHHHHHHHHCCCeEEEEeCCCC-CH---HHHHHHHHcCCEEE
Q 023801 23 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPASM-SL---ERRIILRAFGAELV 72 (277)
Q Consensus 23 ~~vv~aSsGN~g---~a~A~aa~~~Gl~~~vvvp~~~-~~---~~~~~~~~~Ga~v~ 72 (277)
+.+|.+..||.| ..+|..-+..|+++.+|++... +. ...+.++.+|..+.
T Consensus 54 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 54 RFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 677888888877 4455555556999999987642 32 24566777787664
No 181
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=68.87 E-value=36 Score=29.12 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=42.2
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHH----HHHcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~----~~~~Ga~v~~~~ 75 (277)
+.|.++ |.+..++.=.+|.++|++.+++++|++++++-|++- ++.-+.. .+..|+.+..+.
T Consensus 151 ~~g~l~-glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 217 (323)
T 3gd5_A 151 NFGRLA-GLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR 217 (323)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCCC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 457654 434333333489999999999999999999999854 2322322 245788888876
No 182
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=68.82 E-value=46 Score=27.14 Aligned_cols=33 Identities=12% Similarity=0.152 Sum_probs=26.1
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
|...|||..+|--|+++|..-.+.|.+++++-.
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASR 59 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 346788888899999999988888987766543
No 183
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=68.81 E-value=48 Score=27.70 Aligned_cols=146 Identities=9% Similarity=0.057 Sum_probs=75.3
Q ss_pred HHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC---------------CCCHH-----HHH-HH
Q 023801 6 YSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA---------------SMSLE-----RRI-IL 64 (277)
Q Consensus 6 ~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~---------------~~~~~-----~~~-~~ 64 (277)
...+.++++++. ..|+-..+.....+++-.+...+++.+..... ..+.. -.+ ++
T Consensus 59 ~~~~~~l~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (356)
T 3ipc_A 59 ISVANKFVADGV-----KFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLA 133 (356)
T ss_dssp HHHHHHHHHTTC-----CEEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC-----cEEEcCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHH
Confidence 445566666554 45666666677777888888899997653210 01111 122 33
Q ss_pred HHcCC-EEEEeCCCCChH-HHHHHHHHHHHhCCCeE-ecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH
Q 023801 65 RAFGA-ELVLTDPAKGMK-GAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 141 (277)
Q Consensus 65 ~~~Ga-~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~ 141 (277)
+.+|. +|.++.....+. ...+..++..++.+... ....+. +. ...+.....+|.+ ..||.||++ +++..+
T Consensus 134 ~~~g~~~iaii~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~--~~d~~~~~~~l~~---~~~d~v~~~-~~~~~a 206 (356)
T 3ipc_A 134 DHFKDAKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVN-VG--DKDFSALISKMKE---AGVSIIYWG-GLHTEA 206 (356)
T ss_dssp HHCTTCCEEEEECSSHHHHHHHHHHHHHHHHTTCCCSEEEECC-TT--CCCCHHHHHHHHH---TTCCEEEEE-SCHHHH
T ss_pred HhcCCCEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEEeeC-CC--CCCHHHHHHHHHh---cCCCEEEEc-cCchHH
Confidence 44565 454443322222 22333344444442211 111111 00 1112222223322 368998875 456677
Q ss_pred HHHHHHHhhcCCCcEEEEEecC
Q 023801 142 TGAGKFLKEKNPNIKLYGIEPT 163 (277)
Q Consensus 142 aGi~~~~~~~~~~~~vigV~~~ 163 (277)
.++.+.+++.+..+++++....
T Consensus 207 ~~~~~~~~~~g~~~~~~~~~~~ 228 (356)
T 3ipc_A 207 GLIIRQAADQGLKAKLVSGDGI 228 (356)
T ss_dssp HHHHHHHHHHTCCCEEEECGGG
T ss_pred HHHHHHHHHCCCCCcEEEeccc
Confidence 7999999998888888876543
No 184
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=68.45 E-value=33 Score=29.59 Aligned_cols=114 Identities=16% Similarity=0.114 Sum_probs=70.4
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|-.-.-|+-|+++|..++.+|+++..+-|...+.... .|++. ++ +.+ ++.++- +...++-
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~g~~~--~~---~l~-------ell~~s-DvV~l~~ 235 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-----EGAIY--HD---TLD-------SLLGAS-DIFLIAA 235 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----TTCEE--CS---SHH-------HHHHTC-SEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----cCCeE--eC---CHH-------HHHhhC-CEEEEec
Confidence 468888999999999999999999988876654333211 15542 22 222 333443 5554433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhhcCCCcEEEEEec
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKEKNPNIKLYGIEP 162 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~~~~~~~vigV~~ 162 (277)
-.++.. +..+..|.+.++ +++.+++-++.|+..- .+..++++ ..+.-.+.++
T Consensus 236 Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~--g~i~gA~LDV 289 (345)
T 4g2n_A 236 PGRPEL----KGFLDHDRIAKI--PEGAVVINISRGDLINDDALIEALRS--KHLFAAGLDV 289 (345)
T ss_dssp CCCGGG----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH--TSEEEEEESC
T ss_pred CCCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh--CCceEEEecC
Confidence 222222 344567888888 5899999999998753 44455554 2234344443
No 185
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=68.35 E-value=16 Score=31.75 Aligned_cols=45 Identities=9% Similarity=0.019 Sum_probs=34.8
Q ss_pred chHHHHHHHHHHHCCCeEEEEeCC-CC--CHHHHHHH----HHcCCEEEEeC
Q 023801 31 GNTGIGLAFMAAAKQYRLIITMPA-SM--SLERRIIL----RAFGAELVLTD 75 (277)
Q Consensus 31 GN~g~a~A~aa~~~Gl~~~vvvp~-~~--~~~~~~~~----~~~Ga~v~~~~ 75 (277)
.|.++|++.++.++|++++++-|+ +- ++.-+..+ +..|+.+..+.
T Consensus 206 nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 257 (359)
T 1zq6_A 206 TAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSH 257 (359)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred cchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 389999999999999999999998 43 33333333 37799988876
No 186
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=68.03 E-value=35 Score=30.33 Aligned_cols=50 Identities=16% Similarity=0.105 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHHH-CCCeEEEEeC
Q 023801 3 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMP 53 (277)
Q Consensus 3 R~a~~~v~~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp 53 (277)
|++++.++.+++ .|. .....+|+....||-|..+|-...+ +|.+++.+..
T Consensus 190 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD 241 (415)
T 2tmg_A 190 RGVKVCAGLAMDVLGI-DPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSD 241 (415)
T ss_dssp HHHHHHHHHHHHHTTC-CTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCC-CcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEe
Confidence 677778888775 443 3223568888999999999977777 8888775543
No 187
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=67.85 E-value=33 Score=29.87 Aligned_cols=45 Identities=18% Similarity=0.202 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHc--C--CCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEE
Q 023801 4 IGYSMISDAEAK--G--LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLII 50 (277)
Q Consensus 4 ~a~~~v~~a~~~--g--~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~v 50 (277)
+..+.+..+.+. | .| +| ++|+....||-|..+|.....+|.++++
T Consensus 153 GV~~~~~~~~~~~~G~~~L-~G-ktV~V~G~G~VG~~~A~~L~~~GakVvv 201 (364)
T 1leh_A 153 GVYRGMKAAAKEAFGSDSL-EG-LAVSVQGLGNVAKALCKKLNTEGAKLVV 201 (364)
T ss_dssp HHHHHHHHHHHHHHSSCCC-TT-CEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhhccccCC-Cc-CEEEEECchHHHHHHHHHHHHCCCEEEE
Confidence 444555555443 5 33 34 5688889999999999999999998663
No 188
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=67.73 E-value=23 Score=32.29 Aligned_cols=97 Identities=14% Similarity=0.123 Sum_probs=62.9
Q ss_pred CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023801 16 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 95 (277)
Q Consensus 16 g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 95 (277)
+...+| ++|+....|+-|..+|..++.+|.+++++ +.++.+....+.+|+++ + ++++ ..+.-
T Consensus 269 ~~~l~G-ktV~IiG~G~IG~~~A~~lka~Ga~Viv~---d~~~~~~~~A~~~Ga~~--~----~l~e-------~l~~a- 330 (494)
T 3ce6_A 269 DALIGG-KKVLICGYGDVGKGCAEAMKGQGARVSVT---EIDPINALQAMMEGFDV--V----TVEE-------AIGDA- 330 (494)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCEE--C----CHHH-------HGGGC-
T ss_pred CCCCCc-CEEEEEccCHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHcCCEE--e----cHHH-------HHhCC-
Confidence 335667 45777788999999999999999976655 23456666777899974 2 2222 22332
Q ss_pred CeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 023801 96 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 140 (277)
Q Consensus 96 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~ 140 (277)
+.++.... ++. .+..+.++.+ ++..+++-+|.+..
T Consensus 331 DvVi~atg-t~~-------~i~~~~l~~m--k~ggilvnvG~~~~ 365 (494)
T 3ce6_A 331 DIVVTATG-NKD-------IIMLEHIKAM--KDHAILGNIGHFDN 365 (494)
T ss_dssp SEEEECSS-SSC-------SBCHHHHHHS--CTTCEEEECSSSGG
T ss_pred CEEEECCC-CHH-------HHHHHHHHhc--CCCcEEEEeCCCCC
Confidence 55554432 211 2234666776 56789999998875
No 189
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=67.68 E-value=27 Score=31.39 Aligned_cols=50 Identities=12% Similarity=-0.077 Sum_probs=38.3
Q ss_pred hhHHHHHHHHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 3 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 3 R~a~~~v~~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
|++++.++.+++ .| +.....+|+....||-|..+|.....+|.+++.+..
T Consensus 211 ~Gv~~~~~~~~~~~G-~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD 261 (449)
T 1bgv_A 211 YGSVYYVEAVMKHEN-DTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSG 261 (449)
T ss_dssp HHHHHHHHHHHHHTT-CCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHcc-CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 677888888775 44 332235789999999999999999999999886643
No 190
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=67.55 E-value=27 Score=31.27 Aligned_cols=51 Identities=20% Similarity=0.135 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC
Q 023801 3 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 54 (277)
Q Consensus 3 R~a~~~v~~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~ 54 (277)
|++++.++.+++ .|.--+| .+|+....||-|..+|-...++|.+++.+...
T Consensus 216 ~Gv~~~~~~~~~~~g~~l~g-~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 216 RGVFITAAAAAEKIGLQVEG-ARVAIQGFGNVGNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp HHHHHHHHHHHHHHTCCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCccC-CEEEEeccCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 567777777765 4432234 56888899999999999999999888766543
No 191
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=67.42 E-value=47 Score=26.69 Aligned_cols=72 Identities=14% Similarity=0.054 Sum_probs=47.5
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC-CHHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~-~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
...|||..+|--|+++|..-.+.|.+++++-.... .......++..|.++..+.. -.+.++..+...+..++
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 36789999999999999999999998777654322 23445566777888776642 12334444444444444
No 192
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=67.32 E-value=67 Score=28.40 Aligned_cols=91 Identities=14% Similarity=-0.022 Sum_probs=57.9
Q ss_pred HHHHHHHHHHcCCCCCC-CcEEEeeCCchHHHHHHHHHHH-CCCeEEEEeCCCCCH-------------HHHHHHHHcCC
Q 023801 5 GYSMISDAEAKGLITPG-ESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSL-------------ERRIILRAFGA 69 (277)
Q Consensus 5 a~~~v~~a~~~g~l~~g-~~~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp~~~~~-------------~~~~~~~~~Ga 69 (277)
...++...+.++.+..| +..|||..|+--|+++|...+. .|.+++++-...... .....++..|.
T Consensus 30 v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~ 109 (405)
T 3zu3_A 30 VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGL 109 (405)
T ss_dssp HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCC
Confidence 45667777788887444 4567888888999999999999 999887764332211 12335677787
Q ss_pred EEEEeCC-CCChHHHHHHHHHHHHhCC
Q 023801 70 ELVLTDP-AKGMKGAVQKAEEILAKTP 95 (277)
Q Consensus 70 ~v~~~~~-~~~~~~~~~~a~~~~~~~~ 95 (277)
++..+.. -.+.++..+...+..++.+
T Consensus 110 ~a~~i~~Dvtd~~~v~~~v~~i~~~~G 136 (405)
T 3zu3_A 110 YAKSINGDAFSDEIKQLTIDAIKQDLG 136 (405)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHHHTS
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 7765532 1244444555566666653
No 193
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=66.32 E-value=18 Score=28.70 Aligned_cols=53 Identities=23% Similarity=0.224 Sum_probs=41.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCC-EEEEeCC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGA-ELVLTDP 76 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga-~v~~~~~ 76 (277)
+++.+|+..+|.-|++++......|.+++++.... .+...+...+. +++..|-
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~Dl 74 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE---EQGPELRERGASDIVVANL 74 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHTTCSEEEECCT
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh---HHHHHHHhCCCceEEEccc
Confidence 34778999999999999999999999988886543 33445556688 8877764
No 194
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=66.26 E-value=22 Score=29.54 Aligned_cols=54 Identities=13% Similarity=0.026 Sum_probs=40.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC-CHHHHHHHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~-~~~~~~~~~~~Ga~v~~~~~ 76 (277)
+.+|+..+|+-|.+++......|.+++++..... ....+..++..|.+++..|-
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl 67 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGEL 67 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecC
Confidence 5688889999999999999999999888776543 33334445567888877663
No 195
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=66.26 E-value=35 Score=29.27 Aligned_cols=104 Identities=15% Similarity=0.102 Sum_probs=67.4
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-.-|+-|.++|..++.+|++++++-|.. +. ...+.+|++. . +.+ ++.++- +...+.-
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 227 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPII-SP---EVSASFGVQQ--L----PLE-------EIWPLC-DFITVHT 227 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-CH---HHHHHTTCEE--C----CHH-------HHGGGC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCc-ch---hhhhhcCcee--C----CHH-------HHHhcC-CEEEEec
Confidence 468888999999999999999999987775543 22 2345678753 1 222 233343 5554433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhh
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 150 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~ 150 (277)
..++.. ...+..++++++ +++.+++-+|+|+..- .+..++++
T Consensus 228 P~t~~t----~~li~~~~l~~m--k~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 228 PLLPST----TGLLNDNTFAQC--KKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp CCCTTT----TTSBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCHHH----HHhhCHHHHhhC--CCCcEEEECCCccccCHHHHHHHHHh
Confidence 222222 123345777777 5799999999998765 66666665
No 196
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=66.10 E-value=32 Score=27.52 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=48.5
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe-CCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv-p~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
+++.|||..+|--|+++|..-.+.|.++++.. +.... ......++..|.++..+.. -.+.++..+...+..++.
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 33678888889999999999999999887766 33222 3345666777777665432 124444555555555555
No 197
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=66.07 E-value=48 Score=26.73 Aligned_cols=43 Identities=26% Similarity=0.281 Sum_probs=29.9
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC--CcEEEEEecC
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGIEPT 163 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~--~~~vigV~~~ 163 (277)
.+++++ .+.||+|||. +.....|+..++++.+. ++.|+|++-.
T Consensus 182 ~~~l~~-~~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vvg~d~~ 226 (289)
T 3brs_A 182 VELLTK-YPDISVMVGL--NQYSATGAARAIKDMSLEAKVKLVCIDSS 226 (289)
T ss_dssp HHHHHH-CTTEEEEEES--SHHHHHHHHHHHHHTTCTTTSEEEEEESC
T ss_pred HHHHHh-CCCceEEEEC--CCcchHHHHHHHHhcCCCCCEEEEEECCC
Confidence 344443 2568898875 55677899999988763 5888888743
No 198
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=65.84 E-value=45 Score=27.68 Aligned_cols=47 Identities=15% Similarity=0.092 Sum_probs=33.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+++..-..|+-|+++|..++.+|.+++++-+. ..+...++.+|++++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~---~~~~~~~~~~g~~~~ 202 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARE---SDLLARIAEMGMEPF 202 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTSEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHCCCeec
Confidence 45777788999999999999999876666443 344445566787653
No 199
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=65.73 E-value=42 Score=27.44 Aligned_cols=71 Identities=17% Similarity=-0.003 Sum_probs=45.7
Q ss_pred CcEEEeeCCch--HHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCC--EEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGA--ELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSsGN--~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga--~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
...|||..+|+ -|+++|..-.+.|.+++++-... ...+++.++..+. .++.+|- .+.++..+...+..++.
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDV-ISDQEIKDLFVELGKVW 101 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEECCT-TCHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEeec-CCHHHHHHHHHHHHHHc
Confidence 36677777777 99999999999999877765554 5566666654433 3444443 24444555555555554
No 200
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=65.71 E-value=57 Score=27.86 Aligned_cols=73 Identities=18% Similarity=0.211 Sum_probs=49.3
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHH
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEIL 91 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~ 91 (277)
|.+.|||..+|--|+++|....+.|.+++++...... ......++..|.++..+.. -.+.++..+...+..
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~ 124 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI 124 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3467889899999999999999999988777654332 2345667788888876642 124444444455554
Q ss_pred Hh
Q 023801 92 AK 93 (277)
Q Consensus 92 ~~ 93 (277)
++
T Consensus 125 ~~ 126 (346)
T 3kvo_A 125 KK 126 (346)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 201
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=65.50 E-value=29 Score=29.65 Aligned_cols=105 Identities=15% Similarity=0.098 Sum_probs=66.5
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-.-|+-|+++|..++.+|++++++-+..... .....+|++. + +.+ ++.++- +...++-
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 208 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDT---QTEQRLGLRQ--V----ACS-------ELFASS-DFILLAL 208 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCH---HHHHHHTEEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcH---hHHHhcCcee--C----CHH-------HHHhhC-CEEEEcC
Confidence 468888999999999999999999988775544233 2234456532 1 222 233443 5554433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHhh
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 150 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~--aGi~~~~~~ 150 (277)
-.++.. +..+..|.++++ +++.+++-+|.|+.. ..+..+++.
T Consensus 209 P~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 252 (330)
T 4e5n_A 209 PLNADT----LHLVNAELLALV--RPGALLVNPCRGSVVDEAAVLAALER 252 (330)
T ss_dssp CCSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 222222 234456778877 589999999999864 345555554
No 202
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=65.03 E-value=51 Score=26.79 Aligned_cols=72 Identities=11% Similarity=0.099 Sum_probs=47.4
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
..|||..+|--|+++|..-.+.|.++++....... ......++..|.++..+.. -.+.++..+...+..++.
T Consensus 29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999998876444332 2234456677877765532 124444444455554544
No 203
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=64.83 E-value=25 Score=29.65 Aligned_cols=51 Identities=8% Similarity=0.025 Sum_probs=37.5
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
.++..++|..+..++..+- ..-.-.|+++..........++..|++++.++
T Consensus 71 ~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~ 121 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSYVAAERAGLNIALVP 121 (371)
T ss_dssp EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchHHHHHHHHcCCeEEEee
Confidence 5777777788888777765 33234566666666666777899999999998
No 204
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=64.56 E-value=50 Score=26.36 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=37.4
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
+..|||..+|.-|+++|..-.+.|.+++++-... .......++..|.++..+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~ 60 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVP-APEAEAAIRNLGRRVLTVK 60 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-CHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc-hhHHHHHHHhcCCcEEEEE
Confidence 3678999999999999999999999877664432 1222225566787765543
No 205
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=64.56 E-value=56 Score=26.56 Aligned_cols=72 Identities=13% Similarity=0.154 Sum_probs=47.9
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHH
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILA 92 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~ 92 (277)
+..|||..+|--|+++|..-.+.|.+++++-..... ......++..|.+++.+.. -.+.++..+...+..+
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 86 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD 86 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999987776544321 2344556677888876642 1234444444555544
Q ss_pred h
Q 023801 93 K 93 (277)
Q Consensus 93 ~ 93 (277)
+
T Consensus 87 ~ 87 (274)
T 3e03_A 87 T 87 (274)
T ss_dssp H
T ss_pred H
Confidence 4
No 206
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=64.32 E-value=11 Score=32.96 Aligned_cols=47 Identities=11% Similarity=0.108 Sum_probs=34.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
.+|+.-..|+-|++++..++.+|.+++++-+ .+.+.+..+.+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~---~~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDV---RAATKEQVESLGGKFI 219 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CSTTHHHHHHTTCEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCeEE
Confidence 3577778899999999999999997444422 2234555667999865
No 207
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=64.32 E-value=45 Score=26.93 Aligned_cols=73 Identities=8% Similarity=0.091 Sum_probs=46.9
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
.+.|||..+|--|+++|..-.+.|.+++++...... ......++..|.++..+.. -.+.++..+..++..++.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 367899999999999999999999998776444332 2234556667766654432 124444444555555544
No 208
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=64.19 E-value=15 Score=30.32 Aligned_cols=54 Identities=13% Similarity=0.154 Sum_probs=39.5
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-C--CH-HHHH---HHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-M--SL-ERRI---ILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~--~~-~~~~---~~~~~Ga~v~~~~~ 76 (277)
+.+|+..+|+-|.+++......|.+++++.... . .+ .+.. .++..|.+++..|-
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~ 64 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCC
Confidence 568899999999999999988899888876543 1 22 3333 33456888887764
No 209
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=64.15 E-value=25 Score=29.21 Aligned_cols=73 Identities=22% Similarity=0.103 Sum_probs=41.9
Q ss_pred CCcEEEeeCCch--HHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHH-HHcCC-EEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGA-ELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN--~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~-~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
|+..|||..+|+ -|+++|..-.+.|.+++++-........+..+ +..|. ..+.+|- .+.++..+...+..++.
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDV-ADAASIDAVFETLEKKW 107 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCT-TCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCC-CCHHHHHHHHHHHHHhc
Confidence 346788888888 99999999999999877664432112223333 23342 2233343 24444445555555554
No 210
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=63.96 E-value=39 Score=27.69 Aligned_cols=73 Identities=12% Similarity=0.061 Sum_probs=47.1
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC-CHHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~-~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
|...|||..+|--|+++|..-.+.|.+++++-.... .......++..|.++..+.. -.+.++..+..++..++
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999777655422 23344556667766655432 12444444445555444
No 211
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=63.74 E-value=56 Score=26.26 Aligned_cols=71 Identities=11% Similarity=0.042 Sum_probs=43.1
Q ss_pred CcEEEeeCCch--HHHHHHHHHHHCCCeEEEEeCCCCCHHHHHH-HHHcC---CEEEEeCCCCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFG---AELVLTDPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN--~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~-~~~~G---a~v~~~~~~~~~~~~~~~a~~~~~~ 93 (277)
.+.|||..+|. -|+++|..-.+.|.+++++-........... .+.++ ..++.+|-. +.++..+...+..++
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-NDAEIETCFASIKEQ 84 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-SSHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-CHHHHHHHHHHHHHH
Confidence 36788888888 9999999999999998776554333333333 34444 344455532 334444444554444
No 212
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=63.74 E-value=55 Score=26.21 Aligned_cols=43 Identities=21% Similarity=0.226 Sum_probs=31.9
Q ss_pred hHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEe
Q 023801 116 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 161 (277)
Q Consensus 116 ~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~ 161 (277)
...+++++- +.||+|||. +...+.|+..++++.+ .++.|+|.+
T Consensus 166 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 212 (280)
T 3gyb_A 166 ETLALLKEH-PEVTAIFSS--NDITAIGALGAARELGLRVPEDLSIIGYD 212 (280)
T ss_dssp HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEES
T ss_pred HHHHHHhCC-CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCeeEEEEEC
Confidence 445555553 679999986 5667789999999876 357888886
No 213
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=63.61 E-value=14 Score=32.66 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=35.7
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEE
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 73 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 73 (277)
.+|+.-..|+-|++++..++.+|.+++++- ..+.+++.++.+|++.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D---~~~~~~~~~~~lGa~~~~ 220 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFD---TRPEVKEQVQSMGAEFLE 220 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC---SCGGGHHHHHHTTCEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEc---CCHHHHHHHHHcCCEEEE
Confidence 357777889999999999999998755542 233455666788998653
No 214
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=63.42 E-value=49 Score=28.17 Aligned_cols=104 Identities=19% Similarity=0.182 Sum_probs=64.7
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
.+|..-..|+-|.++|..++.+|.+++++-+.. .. ...+.+|.+. . +.++ +.++- +...+.-
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~---~---~l~~-------~l~~a-DvVil~v 212 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR-KE---EVERELNAEF---K---PLED-------LLRES-DFVVLAV 212 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHHCCEE---C---CHHH-------HHHHC-SEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc-ch---hhHhhcCccc---C---CHHH-------HHhhC-CEEEECC
Confidence 468888899999999999999999987775543 22 2334567642 1 2222 22333 4554433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhh
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 150 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~ 150 (277)
-.++.. ...+..++++.+ +++.+++-++.|+... -+..+++.
T Consensus 213 p~~~~t----~~~i~~~~~~~m--k~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 213 PLTRET----YHLINEERLKLM--KKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH----HHhhCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 222211 122335667776 4678999999998766 56677765
No 215
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=63.29 E-value=60 Score=26.47 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=27.1
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|...|||..+|--|+++|..-.+.|.+++++-
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 34678999999999999999999999877764
No 216
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=63.23 E-value=32 Score=28.89 Aligned_cols=113 Identities=15% Similarity=0.145 Sum_probs=68.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-.-|+-|.++|..++.+|++++++-+...+... . ..+. +.+ ++.++- +...+.-
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--------~--~~~~---~l~-------ell~~a-DiV~l~~ 181 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV--------D--VISE---SPA-------DLFRQS-DFVLIAI 181 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC--------S--EECS---SHH-------HHHHHC-SEEEECC
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc--------c--cccC---ChH-------HHhhcc-CeEEEEe
Confidence 46888899999999999999999999888654322111 1 1221 222 233333 4454433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHhhcCCCcEEEEEecCC
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEPTE 164 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~--aGi~~~~~~~~~~~~vigV~~~~ 164 (277)
..++.. ...+..+.++++ +++.+++-+|+|+.. ..+..++++.. ..-.+.+...
T Consensus 182 P~t~~t----~~li~~~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~g~--i~ga~lDV~~ 237 (290)
T 3gvx_A 182 PLTDKT----RGMVNSRLLANA--RKNLTIVNVARADVVSKPDMIGFLKERS--DVWYLSDVWW 237 (290)
T ss_dssp CCCTTT----TTCBSHHHHTTC--CTTCEEEECSCGGGBCHHHHHHHHHHCT--TCEEEESCCT
T ss_pred eccccc----hhhhhHHHHhhh--hcCceEEEeehhcccCCcchhhhhhhcc--ceEEeecccc
Confidence 323322 223446777777 578999999999853 45556665532 3444555433
No 217
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=63.22 E-value=60 Score=26.39 Aligned_cols=45 Identities=11% Similarity=0.034 Sum_probs=30.8
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC---CcEEEEEec
Q 023801 117 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP---NIKLYGIEP 162 (277)
Q Consensus 117 ~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~---~~~vigV~~ 162 (277)
..+++++. +++|++++-+.+-..+.|+..++++.+. ++.|+|++-
T Consensus 186 ~~~~l~~~-~~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~D~ 233 (306)
T 8abp_A 186 ANSMLVQH-PEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGING 233 (306)
T ss_dssp HHHHHTTC-TTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEESS
T ss_pred HHHHHHhC-CCCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEeCc
Confidence 34444443 5688844445566778899999998774 678888863
No 218
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=63.06 E-value=31 Score=23.53 Aligned_cols=49 Identities=16% Similarity=0.275 Sum_probs=33.5
Q ss_pred cEEEeeCCchHHHHHHHHHHHCC-CeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~G-l~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
+.+|+.. |..|.+++......| .+++++-. ++.+...++..|.+++..+
T Consensus 7 ~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~~~~~~~d 56 (118)
T 3ic5_A 7 NICVVGA-GKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMGVATKQVD 56 (118)
T ss_dssp EEEEECC-SHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTTCEEEECC
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCCCcEEEec
Confidence 3344544 999999999999999 66555533 4566666666676666554
No 219
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=62.95 E-value=27 Score=31.87 Aligned_cols=97 Identities=18% Similarity=0.174 Sum_probs=62.1
Q ss_pred CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023801 16 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 95 (277)
Q Consensus 16 g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 95 (277)
|..-.| ++|.....|+-|+++|..++.+|.+++++-+. +.+.......|.++. +.+ ++.++-
T Consensus 272 g~~L~G-ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~---~~~~~~a~~~G~~~~------~l~-------ell~~a- 333 (494)
T 3d64_A 272 DVMIAG-KIAVVAGYGDVGKGCAQSLRGLGATVWVTEID---PICALQAAMEGYRVV------TME-------YAADKA- 333 (494)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHTTTCEEEEECSC---HHHHHHHHTTTCEEC------CHH-------HHTTTC-
T ss_pred ccccCC-CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC---hHhHHHHHHcCCEeC------CHH-------HHHhcC-
Confidence 433345 46888899999999999999999998777433 333323345677641 122 222332
Q ss_pred CeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 023801 96 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 140 (277)
Q Consensus 96 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~ 140 (277)
+.+.+.. .+. ..+..|.++++ ++..+++-+|.|+.
T Consensus 334 DiVi~~~-~t~-------~lI~~~~l~~M--K~gAilINvgrg~v 368 (494)
T 3d64_A 334 DIFVTAT-GNY-------HVINHDHMKAM--RHNAIVCNIGHFDS 368 (494)
T ss_dssp SEEEECS-SSS-------CSBCHHHHHHC--CTTEEEEECSSSSC
T ss_pred CEEEECC-Ccc-------cccCHHHHhhC--CCCcEEEEcCCCcc
Confidence 5555543 211 22345778887 57999999999986
No 220
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=62.59 E-value=23 Score=31.85 Aligned_cols=50 Identities=10% Similarity=-0.158 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 3 R~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|+.++.++.+++.-.......+|+....||-|..+|....++|.+++.+.
T Consensus 220 ~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavs 269 (456)
T 3r3j_A 220 YGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMS 269 (456)
T ss_dssp HHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEE
T ss_pred hHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 56777888877643333333568889999999999999888888876443
No 221
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=62.28 E-value=68 Score=26.77 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=26.5
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|...|||..+|--|+++|..-.+.|.+++++-
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAID 77 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEe
Confidence 34678888889999999999999999887764
No 222
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=62.07 E-value=38 Score=30.29 Aligned_cols=73 Identities=8% Similarity=0.094 Sum_probs=47.9
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
++..|||..+|--|+++|..-.+.|.+++++-............+..+.+++.+|-. +.++..+...+..++.
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvt-d~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVT-ADDAVDKITAHVTEHH 285 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTT-STTHHHHHHHHHHHHS
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHHHc
Confidence 446788888899999999998899998666543332333344556678888888753 3344444445554544
No 223
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=61.87 E-value=11 Score=30.63 Aligned_cols=25 Identities=12% Similarity=0.194 Sum_probs=22.3
Q ss_pred CchHHHHHHHHHHHCCCeEEEEeCC
Q 023801 30 SGNTGIGLAFMAAAKQYRLIITMPA 54 (277)
Q Consensus 30 sGN~g~a~A~aa~~~Gl~~~vvvp~ 54 (277)
||-.|.++|-++.+.|.+++++-..
T Consensus 28 SG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 8999999999999999998887643
No 224
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=61.82 E-value=59 Score=25.89 Aligned_cols=52 Identities=12% Similarity=0.189 Sum_probs=35.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCe-EEEEeCCCCCHHHHHHHHHc--CCEEEEe
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAF--GAELVLT 74 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~-~~vvvp~~~~~~~~~~~~~~--Ga~v~~~ 74 (277)
.+.||+..+|--|+++|..-.+.|.+ ++++- .......+..++.. +.++..+
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~-r~~~~~~~~~l~~~~~~~~~~~~ 60 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILD-RVENPTALAELKAINPKVNITFH 60 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEE-SSCCHHHHHHHHHHCTTSEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEEEe-cCchHHHHHHHHHhCCCceEEEE
Confidence 36789989999999999999999997 55443 33333444555443 5555444
No 225
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=61.68 E-value=72 Score=26.84 Aligned_cols=100 Identities=14% Similarity=0.105 Sum_probs=52.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHH----HHHH-HcCCEEEEeCCC-CChHHHHHHHHHHHHhCCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR----IILR-AFGAELVLTDPA-KGMKGAVQKAEEILAKTPN 96 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~----~~~~-~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~~~ 96 (277)
..|||..+|--|+++|..-.+.|.+++++...+ ..+. ..++ ..|.++..+... .+.+...... +. +
T Consensus 48 ~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~-~ 119 (328)
T 2qhx_A 48 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS--AAEANALSATLNARRPNSAITVQADLSNVATAPVSG-----AD-G 119 (328)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC------------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccc-----cc-c
Confidence 678888889999999998888898877665122 2222 2222 445555443210 1111000000 00 1
Q ss_pred eEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCc
Q 023801 97 AYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 138 (277)
Q Consensus 97 ~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~G 138 (277)
..+.........+..++.+++ +.+|.+|..+|..
T Consensus 120 -------~~~~~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~ 153 (328)
T 2qhx_A 120 -------SAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSF 153 (328)
T ss_dssp --------CCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred -------ccccccHHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 011111223445556666776 6799999999864
No 226
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=61.64 E-value=46 Score=26.84 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=25.7
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
.+.||+..+|.-|+++|....+.|.+++++.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVD 38 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEE
Confidence 3678999999999999998888888766654
No 227
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=61.61 E-value=80 Score=27.30 Aligned_cols=106 Identities=11% Similarity=0.115 Sum_probs=66.4
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCe-EEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 101 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~-~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 101 (277)
++|..-..||-|.++|..++.+|++ ++++-+...+.. ..+.+|++. +. +.+ ++.++- +...++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvV~l~ 228 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKD---AEEKVGARR--VE---NIE-------ELVAQA-DIVTVN 228 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHH---HHHHTTEEE--CS---SHH-------HHHHTC-SEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchh---HHHhcCcEe--cC---CHH-------HHHhcC-CEEEEC
Confidence 4688889999999999999999997 777654433332 345677542 22 222 233333 555443
Q ss_pred CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHhh
Q 023801 102 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 150 (277)
Q Consensus 102 ~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~--aGi~~~~~~ 150 (277)
--.++.. ...+..+.+.++ +++.+++-+|.|+.. ..+..++++
T Consensus 229 ~P~t~~t----~~li~~~~l~~m--k~ga~lIn~arG~~vd~~aL~~aL~~ 273 (364)
T 2j6i_A 229 APLHAGT----KGLINKELLSKF--KKGAWLVNTARGAICVAEDVAAALES 273 (364)
T ss_dssp CCCSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCChHH----HHHhCHHHHhhC--CCCCEEEECCCCchhCHHHHHHHHHc
Confidence 3222222 233445777777 578999999999864 345556655
No 228
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=61.33 E-value=32 Score=27.72 Aligned_cols=53 Identities=17% Similarity=0.117 Sum_probs=37.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCC---CeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQ---YRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~G---l~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.+.||+..+|--|+++|....+.| .+++++.........+..+...+.++..+
T Consensus 22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~ 77 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHIL 77 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEE
T ss_pred CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEE
Confidence 367888899999999999999999 88877765543333445554445555444
No 229
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=61.32 E-value=65 Score=26.17 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=26.9
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|...|||..+|--|+++|..-.+.|.+++++-
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~ 42 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVD 42 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEe
Confidence 33678999999999999999999999877764
No 230
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=60.91 E-value=40 Score=27.55 Aligned_cols=55 Identities=15% Similarity=0.241 Sum_probs=38.5
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTD 75 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~ 75 (277)
+...|||..+|--|+++|..-.+.|.+++++...... ......++..|.++..+.
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 85 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEE
Confidence 3467888899999999999999999987776544321 122345666787766553
No 231
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=60.87 E-value=40 Score=30.84 Aligned_cols=59 Identities=14% Similarity=0.015 Sum_probs=44.1
Q ss_pred CCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe-CCCC---------------CHHHHHHHHHcCCEEEEeC
Q 023801 17 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASM---------------SLERRIILRAFGAELVLTD 75 (277)
Q Consensus 17 ~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv-p~~~---------------~~~~~~~~~~~Ga~v~~~~ 75 (277)
.++++++.|||..+|--|.++|..-.+.|.+.++++ ..+. .......++..|+++..+.
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~ 321 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVT 321 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEE
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEE
Confidence 356777788999999999999988888899866666 4432 2344666788899887765
No 232
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=60.66 E-value=50 Score=26.65 Aligned_cols=74 Identities=12% Similarity=0.077 Sum_probs=46.7
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
|...|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..++.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3467899999999999999999999997766432211 1223445566777765532 124444445555555554
No 233
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=60.58 E-value=61 Score=25.65 Aligned_cols=53 Identities=21% Similarity=0.201 Sum_probs=38.4
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC-CCCH-HHHHHHHHcCCEEEEeC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-SMSL-ERRIILRAFGAELVLTD 75 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~-~~~~-~~~~~~~~~Ga~v~~~~ 75 (277)
+.||+..+|--|+++|..-.+.|.+++++... .... .....++..|.++..+.
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 63 (258)
T 3afn_B 9 RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63 (258)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEE
Confidence 67888899999999999999999997777654 2222 23345566677776554
No 234
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=60.57 E-value=19 Score=32.08 Aligned_cols=51 Identities=22% Similarity=0.040 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 3 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 3 R~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
|+.++.++.+++.-.+.....+|+....||-|..+|....++|.+++.+..
T Consensus 202 ~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD 252 (424)
T 3k92_A 202 QGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISD 252 (424)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 466777777765322233335788899999999999999888888776654
No 235
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=60.48 E-value=43 Score=27.32 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=24.8
Q ss_pred cEEEeeCCchHH---HHHHHHHHHCCCeEEEEeCCC
Q 023801 23 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPAS 55 (277)
Q Consensus 23 ~~vv~aSsGN~g---~a~A~aa~~~Gl~~~vvvp~~ 55 (277)
+.+|.+..||.| ..+|..-+..|.++.|+++..
T Consensus 60 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~ 95 (246)
T 1jzt_A 60 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKR 95 (246)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 567888888876 566666666799999987653
No 236
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=60.30 E-value=23 Score=29.94 Aligned_cols=54 Identities=22% Similarity=0.102 Sum_probs=41.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-CCHHHHH---HHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRI---ILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~~~~~~~---~~~~~Ga~v~~~~~ 76 (277)
+.+|+..+|.-|.+++-.....|.+++++.... ..+.+.. .++..|.+++..|-
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl 69 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI 69 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec
Confidence 578999999999999999999999988887654 3444444 44456888877764
No 237
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=60.03 E-value=45 Score=27.49 Aligned_cols=73 Identities=16% Similarity=0.171 Sum_probs=46.7
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
|.+.|||..+|--|+++|..-.+.|.+++++...... ......++..|.+++.+.. -.+.++..+...+..++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999987776544321 1223445667887766542 12334444444444444
No 238
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=60.00 E-value=10 Score=29.82 Aligned_cols=28 Identities=14% Similarity=0.075 Sum_probs=26.3
Q ss_pred EEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 25 LIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 25 vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|+.-.+|-.|.++|...++.|++++|+=
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 8888999999999999999999999984
No 239
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=59.93 E-value=70 Score=26.11 Aligned_cols=90 Identities=12% Similarity=0.244 Sum_probs=46.2
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
+.|||..+|--|+++|..-.+.|.+++++... .....+...++.+..+......+
T Consensus 14 ~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~-------------------------~~~~~~~~~~l~~~~~~~~~~~~ 68 (311)
T 3o26_A 14 CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRD-------------------------VTKGHEAVEKLKNSNHENVVFHQ 68 (311)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-------------------------HHHHHHHHHHHHTTTCCSEEEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCC-------------------------HHHHHHHHHHHHhcCCCceEEEE
Confidence 56777777777777777776666654443322 11112222233222211111112
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCch
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGG 139 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg 139 (277)
.| ..........+..++.++. +.+|.+|..+|..+
T Consensus 69 ~D-l~~~~~~v~~~~~~~~~~~-g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 69 LD-VTDPIATMSSLADFIKTHF-GKLDILVNNAGVAG 103 (311)
T ss_dssp CC-TTSCHHHHHHHHHHHHHHH-SSCCEEEECCCCCS
T ss_pred cc-CCCcHHHHHHHHHHHHHhC-CCCCEEEECCcccc
Confidence 21 1111133345556666666 67999999998763
No 240
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=59.81 E-value=62 Score=26.11 Aligned_cols=73 Identities=14% Similarity=0.070 Sum_probs=47.2
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHH----HHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER----RIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~----~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
...|||..+|--|+++|..-.+.|.+++++........+ ...++..|.++..+.. -.+.++..+...+..++.
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 367888888999999999999999988776543333333 3445566888876542 124444445555555544
No 241
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=59.81 E-value=52 Score=26.40 Aligned_cols=73 Identities=11% Similarity=0.022 Sum_probs=44.4
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
+.+.|||..+|--|+++|..-.+.|.+++++...... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3467999999999999999999999987776443211 1123344556777765432 12333334444444444
No 242
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=59.75 E-value=37 Score=29.61 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=43.0
Q ss_pred HcCCCCCCCcEEEeeCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCH----HHHH----HHHHcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTSG--NTGIGLAFMAAAKQYRLIITMPASMSL----ERRI----ILRAFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsG--N~g~a~A~aa~~~Gl~~~vvvp~~~~~----~~~~----~~~~~Ga~v~~~~ 75 (277)
+.|.++ | .+|+-...+ |.++|++.+++++|++++++-|+.-.+ .-+. ..+..|+.+..+.
T Consensus 174 ~~G~l~-g-lkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~ 243 (365)
T 4amu_A 174 KFGNLK-N-KKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFST 243 (365)
T ss_dssp HHSSCT-T-CEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEES
T ss_pred HhCCCC-C-CEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEEC
Confidence 456654 4 346666665 889999999999999999999985432 2222 2456788888776
No 243
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=59.73 E-value=35 Score=29.14 Aligned_cols=60 Identities=18% Similarity=0.132 Sum_probs=42.7
Q ss_pred HcCCCCCCCcEEEeeCC-chHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHH----HcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTS-GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs-GN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~~~ 75 (277)
+.|.++ | .+|+-... .|.++|++.+++++|++++++-|++- ++.-+..++ ..|+.+..+.
T Consensus 149 ~~g~l~-g-l~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 215 (321)
T 1oth_A 149 HYSSLK-G-LTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN 215 (321)
T ss_dssp HHSCCT-T-CEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-C-cEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 457654 4 34555554 57999999999999999999999865 333333333 5788888776
No 244
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=59.63 E-value=50 Score=26.17 Aligned_cols=73 Identities=16% Similarity=0.072 Sum_probs=46.4
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
.+.|||..+|--|+++|..-.+.|.+++++...... ......++..|.++..+.. -.+.++..+...+..++.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 367888899999999999999999987776543221 1224455666777765532 124444444455554443
No 245
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=59.10 E-value=30 Score=28.46 Aligned_cols=73 Identities=15% Similarity=0.227 Sum_probs=46.0
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
+...|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3367889999999999999999999998777533221 2224455667877766532 12334444444444443
No 246
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=59.06 E-value=60 Score=28.59 Aligned_cols=38 Identities=29% Similarity=0.396 Sum_probs=31.2
Q ss_pred CCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC
Q 023801 18 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM 56 (277)
Q Consensus 18 l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~ 56 (277)
+-|+. +|....+|..|+.++.+|+++|++++++-|...
T Consensus 32 ~~~~~-~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 32 ILPGA-WLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CCTTC-EEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 55774 577788999999999999999999988865433
No 247
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=58.78 E-value=72 Score=25.91 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=27.3
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
|...|||..+|--|+++|..-.+.|.+++++-.
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 336789999999999999999999998877643
No 248
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=58.35 E-value=17 Score=30.82 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=43.1
Q ss_pred HcCCCCCCCcEEEeeCC---chHHHHHHHHHHHC-CCeEEEEeCCCC-CHHHHHHHHHcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAK-QYRLIITMPASM-SLERRIILRAFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs---GN~g~a~A~aa~~~-Gl~~~vvvp~~~-~~~~~~~~~~~Ga~v~~~~ 75 (277)
+.|.++ | .+|+-... +|.++|++.+++++ |++++++-|++- ++..+ ++..|+++..+.
T Consensus 143 ~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~--~~~~g~~~~~~~ 205 (299)
T 1pg5_A 143 HFNTID-G-LVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI--LDELNYPVKEVE 205 (299)
T ss_dssp HHSCST-T-CEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH--HTTCCSCEEEES
T ss_pred HhCCcC-C-cEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH--HHHcCCeEEEeC
Confidence 457654 4 34555555 69999999999999 999999999865 33333 567899887776
No 249
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=58.25 E-value=38 Score=28.51 Aligned_cols=82 Identities=15% Similarity=0.082 Sum_probs=47.4
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
.++..++|..+..++..+- ..-.-.|+++...-..-...++.+|++++.++- ..++ -..+..++.........++..
T Consensus 84 ~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~ 161 (365)
T 3get_A 84 NIIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCL 161 (365)
T ss_dssp GEEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEES
T ss_pred eEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcC
Confidence 4788888888888877664 222234555555555666778889999999984 2333 222222332223334455543
Q ss_pred CCCCc
Q 023801 103 FENPA 107 (277)
Q Consensus 103 ~~~~~ 107 (277)
-.||.
T Consensus 162 p~npt 166 (365)
T 3get_A 162 PNNPL 166 (365)
T ss_dssp SCTTT
T ss_pred CCCCC
Confidence 34443
No 250
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=58.11 E-value=24 Score=31.20 Aligned_cols=44 Identities=9% Similarity=0.086 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHH----HHHcCCEEEEeC
Q 023801 32 NTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTD 75 (277)
Q Consensus 32 N~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~----~~~~Ga~v~~~~ 75 (277)
|.++|+..+++++|++++++.|+.- ++.-+.. .+..|+++..+.
T Consensus 209 nVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~ 258 (399)
T 3q98_A 209 SVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVT 258 (399)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 7899999999999999999999853 4444433 346799988876
No 251
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=58.10 E-value=27 Score=29.63 Aligned_cols=53 Identities=9% Similarity=-0.033 Sum_probs=36.5
Q ss_pred EEEeeCCchHHHHHHHHHHHCC------------CeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQ------------YRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~G------------l~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..+|..+.... -.-.|+++......-...++.+|++++.++.
T Consensus 88 ~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~ 152 (397)
T 3f9t_A 88 YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPI 152 (397)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECB
T ss_pred CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEee
Confidence 5778888888887776654321 1234555555555667778889999999985
No 252
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=58.10 E-value=74 Score=25.82 Aligned_cols=40 Identities=13% Similarity=0.215 Sum_probs=28.5
Q ss_pred HHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC-----CCcEEEEEe
Q 023801 119 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-----PNIKLYGIE 161 (277)
Q Consensus 119 Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~-----~~~~vigV~ 161 (277)
+++++ .+.||+|||. +...+.|+..++++.+ .++.|+|++
T Consensus 181 ~~l~~-~~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~~dv~vig~D 225 (297)
T 3rot_A 181 SYFKI-HPETNIIFCL--TSQALDPLGQMLLHPDRYDFNYQPQVYSFD 225 (297)
T ss_dssp HHHHH-CTTCCEEEES--SHHHHHHHHHHHHSHHHHTCCCCCEEEEEC
T ss_pred HHHHh-CCCCCEEEEc--CCcchHHHHHHHHhcCCccCCCceEEEEeC
Confidence 44443 2578999875 4667789999998865 368888885
No 253
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=58.06 E-value=47 Score=29.97 Aligned_cols=58 Identities=22% Similarity=0.211 Sum_probs=41.5
Q ss_pred CCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-----HHHHHHHHHcCCEEEEeC
Q 023801 18 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-----LERRIILRAFGAELVLTD 75 (277)
Q Consensus 18 l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-----~~~~~~~~~~Ga~v~~~~ 75 (277)
++++++.+||..+|.-|.++|..-.+.|.+.++.+..+.+ ......++..|+++..+.
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~ 285 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 285 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEE
Confidence 5677788999999999999999888889874444433221 233456778899887664
No 254
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=57.92 E-value=29 Score=29.13 Aligned_cols=52 Identities=13% Similarity=0.144 Sum_probs=35.9
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..++..+-. +-.-.|+++......-...++.+|++++.++.
T Consensus 70 ~i~~~~g~~~a~~~~~~~l~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 121 (354)
T 3ly1_A 70 SILLTAGSSEGIRAAIEAYA-SLEAQLVIPELTYGDGEHFAKIAGMKVTKVKM 121 (354)
T ss_dssp GEEEESHHHHHHHHHHHHHC-CTTCEEEEESSSCTHHHHHHHHTTCEEEEECC
T ss_pred HEEEeCChHHHHHHHHHHHh-CCCCeEEECCCCchHHHHHHHHcCCEEEEecC
Confidence 47888888888888877642 22223445544444566778899999999975
No 255
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=57.85 E-value=56 Score=26.48 Aligned_cols=73 Identities=12% Similarity=0.224 Sum_probs=47.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
|...|||..+|--|+++|..-.+.|.++++....... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3467888899999999999999999988876544322 2234556777887766542 12344444444555444
No 256
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=57.74 E-value=30 Score=30.73 Aligned_cols=51 Identities=20% Similarity=0.171 Sum_probs=39.0
Q ss_pred hhHHHHHHHHHH-cCCC-CCCCcEEEeeCCchHHHHHHHHHHH-CCCeEEEEeCC
Q 023801 3 RIGYSMISDAEA-KGLI-TPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPA 54 (277)
Q Consensus 3 R~a~~~v~~a~~-~g~l-~~g~~~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp~ 54 (277)
|++++.++.+++ .|.- -.| ++|.....||-|+.+|-.++. +|.+++.+-..
T Consensus 192 ~Gv~~~~~~~~~~~G~~~l~g-ktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 192 RGASYTIREAAKVLGWDTLKG-KTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHTTCSCSTT-CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHhCCcccCC-CEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 577777777765 4432 234 578999999999999999999 99998877543
No 257
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=57.71 E-value=70 Score=27.69 Aligned_cols=53 Identities=13% Similarity=0.065 Sum_probs=37.5
Q ss_pred cEEEeeCC-chHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHHHHH------cCCEEEEeC
Q 023801 23 SVLIEPTS-GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRA------FGAELVLTD 75 (277)
Q Consensus 23 ~~vv~aSs-GN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~~~~------~Ga~v~~~~ 75 (277)
.+|+-... -|.++|++.++.++|++++++-|+.- ++.-+..++. .|+.+..+.
T Consensus 189 lkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~ 250 (353)
T 3sds_A 189 LKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT 250 (353)
T ss_dssp CEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC
Confidence 34555544 46789999999999999999999865 4444444443 366777665
No 258
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=57.69 E-value=49 Score=30.13 Aligned_cols=58 Identities=28% Similarity=0.249 Sum_probs=41.9
Q ss_pred CCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC-----CHHHHHHHHHcCCEEEEeC
Q 023801 18 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-----SLERRIILRAFGAELVLTD 75 (277)
Q Consensus 18 l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~-----~~~~~~~~~~~Ga~v~~~~ 75 (277)
++++++.||+..+|.-|.++|..-...|.+.++++.... .......++..|+++..+.
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~ 318 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAA 318 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEE
Confidence 466778899999999999999999999986444443221 1234566777899887754
No 259
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=57.67 E-value=8.1 Score=37.52 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=32.7
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
+.+.+++|.+.+|...+|.-|.+....|+.+|.++++..
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~ 377 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA 377 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 567889998877777789999999999999999866654
No 260
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=57.47 E-value=21 Score=28.78 Aligned_cols=62 Identities=6% Similarity=-0.002 Sum_probs=40.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHH
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQ 85 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~ 85 (277)
+.|||..+|--|+++|....+.|.+++++-...........++..|.+++.++. .+.+...+
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~-~~v~~~~~ 64 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSE-QEPAELIE 64 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCC-CSHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECH-HHHHHHHH
Confidence 468888999999999999999999876654433333333335566777766632 33444333
No 261
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=57.38 E-value=76 Score=25.70 Aligned_cols=69 Identities=12% Similarity=0.121 Sum_probs=42.3
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCE--EEEeCCCCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE--LVLTDPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~--v~~~~~~~~~~~~~~~a~~~~~~ 93 (277)
+..|||..+|--|+++|..-.+.|.+++++-.......+. .+.+|.+ .+.+|- .+.++..+...+..++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA--AASVGRGAVHHVVDL-TNEVSVRALIDFTIDT 82 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH--HHHHCTTCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--HHHhCCCeEEEECCC-CCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999877765444333222 2233544 444443 2334444444444444
No 262
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=57.21 E-value=30 Score=31.41 Aligned_cols=94 Identities=21% Similarity=0.179 Sum_probs=60.6
Q ss_pred CCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeE
Q 023801 19 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY 98 (277)
Q Consensus 19 ~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~ 98 (277)
-.| ++|.....|+-|.++|..++.+|.+++++-|. +.+.......|.++. +.+ ++.++- +.+
T Consensus 255 l~G-ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~---~~~~~~a~~~g~~~~------~l~-------ell~~a-DiV 316 (479)
T 1v8b_A 255 ISG-KIVVICGYGDVGKGCASSMKGLGARVYITEID---PICAIQAVMEGFNVV------TLD-------EIVDKG-DFF 316 (479)
T ss_dssp CTT-SEEEEECCSHHHHHHHHHHHHHTCEEEEECSC---HHHHHHHHTTTCEEC------CHH-------HHTTTC-SEE
T ss_pred cCC-CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCC---hhhHHHHHHcCCEec------CHH-------HHHhcC-CEE
Confidence 345 46888899999999999999999998877443 333323345677541 222 222332 566
Q ss_pred ecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 023801 99 MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 140 (277)
Q Consensus 99 ~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~ 140 (277)
.+.. .+. ..+..|.+++| ++..|++-+|.|+.
T Consensus 317 i~~~-~t~-------~lI~~~~l~~M--K~gailiNvgrg~~ 348 (479)
T 1v8b_A 317 ITCT-GNV-------DVIKLEHLLKM--KNNAVVGNIGHFDD 348 (479)
T ss_dssp EECC-SSS-------SSBCHHHHTTC--CTTCEEEECSSTTT
T ss_pred EECC-Chh-------hhcCHHHHhhc--CCCcEEEEeCCCCc
Confidence 5553 111 22334777777 57899999999976
No 263
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=57.09 E-value=79 Score=27.88 Aligned_cols=73 Identities=21% Similarity=0.022 Sum_probs=46.4
Q ss_pred CcEEEeeCCchHHHHHHHHHH-HCCCeEEEEeCCCCC-------------HHHHHHHHHcCCEEEEeCCC-CChHHHHHH
Q 023801 22 ESVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPASMS-------------LERRIILRAFGAELVLTDPA-KGMKGAVQK 86 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~-~~Gl~~~vvvp~~~~-------------~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~ 86 (277)
++.||+..|...|+|.|.+.+ +.|-.++++--+..+ ....+.++..|.+.+.+... .+.+...+.
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v 130 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV 130 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence 377999999999999888776 678887777543221 12345678888887766532 232333444
Q ss_pred HHHHHHhC
Q 023801 87 AEEILAKT 94 (277)
Q Consensus 87 a~~~~~~~ 94 (277)
..+..++.
T Consensus 131 i~~i~~~~ 138 (401)
T 4ggo_A 131 IEEAKKKG 138 (401)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 45554554
No 264
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=57.03 E-value=44 Score=27.57 Aligned_cols=24 Identities=25% Similarity=0.216 Sum_probs=18.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQY 46 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl 46 (277)
+.|||..+|--|+++|..-.+.|.
T Consensus 35 ~~lVTGas~GIG~aia~~l~~~G~ 58 (287)
T 3rku_A 35 TVLITGASAGIGKATALEYLEASN 58 (287)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHT
T ss_pred EEEEecCCChHHHHHHHHHHHcCC
Confidence 678888888888888877666665
No 265
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=57.00 E-value=74 Score=25.93 Aligned_cols=54 Identities=15% Similarity=0.062 Sum_probs=39.4
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-CCHHHHHHHHHcCCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~~~~~~~~~~~~Ga~v~~~~ 75 (277)
...|||..+|--|+++|..-.+.|.+++++-... ........++..|.++..+.
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 88 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELA 88 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 3678888889999999999999999877765432 23444556677787776553
No 266
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=56.98 E-value=51 Score=26.25 Aligned_cols=54 Identities=17% Similarity=0.100 Sum_probs=37.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~ 75 (277)
.+.||+..+|.-|+++|....+.|.+++++...... ....+.++..|.++..+.
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 68 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVV 68 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 367999999999999999999999987776543211 122344555676665543
No 267
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=56.83 E-value=54 Score=26.55 Aligned_cols=73 Identities=16% Similarity=0.160 Sum_probs=46.5
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 93 (277)
|.+.|||..+|--|+++|..-.+.|.+++++...... ......++..|.++..+... .+.++..+...+..++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 3467888889999999999999999998777654322 12234556777777655421 2334444444444443
No 268
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=56.77 E-value=62 Score=25.71 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=45.0
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
...|||..+|.-|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999997766433211 1223445666887766542 12334444444444443
No 269
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=56.77 E-value=65 Score=26.92 Aligned_cols=73 Identities=19% Similarity=0.189 Sum_probs=47.5
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC-----------CCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHH
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-----------SMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAE 88 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~-----------~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~ 88 (277)
|...|||..+|--|+++|..-.+.|.+++++-.. .........++..|.++..+... .+.++..+...
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 106 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3367888888999999999999999988776432 11223455667788888776532 23444444445
Q ss_pred HHHHh
Q 023801 89 EILAK 93 (277)
Q Consensus 89 ~~~~~ 93 (277)
+..++
T Consensus 107 ~~~~~ 111 (322)
T 3qlj_A 107 TAVET 111 (322)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 270
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=56.66 E-value=44 Score=26.84 Aligned_cols=53 Identities=13% Similarity=0.182 Sum_probs=36.0
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC---HHHHHHHHHcCCEEEEeC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS---LERRIILRAFGAELVLTD 75 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~---~~~~~~~~~~Ga~v~~~~ 75 (277)
..||+..+|--|+++|..-.+.|.+++++...... ......++..|.++..+.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVG 59 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 67899999999999999999999987766443221 112334455576665543
No 271
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=56.19 E-value=26 Score=31.20 Aligned_cols=44 Identities=14% Similarity=0.240 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHH----HHHcCCEEEEeC
Q 023801 32 NTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTD 75 (277)
Q Consensus 32 N~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~----~~~~Ga~v~~~~ 75 (277)
|.++|++.++.++|++++++-|+.- .+.-+.. .+..|+++..+.
T Consensus 206 nVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~ 255 (418)
T 2yfk_A 206 SVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTN 255 (418)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEES
T ss_pred hHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 5999999999999999999999864 4444433 346799888876
No 272
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=56.10 E-value=28 Score=29.60 Aligned_cols=51 Identities=10% Similarity=-0.040 Sum_probs=32.7
Q ss_pred EEEeeCCchHHHHHHHHHHH-CCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.|+..++|..+..++..+-. -|= .|+++......-...++..|++++.++.
T Consensus 94 ~v~~~~G~~~al~~~~~~l~~~gd--~Vl~~~~~y~~~~~~~~~~g~~~~~v~~ 145 (369)
T 3cq5_A 94 NLWAANGSNEILQQLLQAFGGPGR--TALGFQPSYSMHPILAKGTHTEFIAVSR 145 (369)
T ss_dssp GEEEESHHHHHHHHHHHHHCSTTC--EEEEEESSCTHHHHHHHHTTCEEEEEEC
T ss_pred hEEECCChHHHHHHHHHHhcCCCC--EEEEcCCChHHHHHHHHHcCCEEEEecC
Confidence 47777888888876665542 242 3344433334455677889999998874
No 273
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=55.95 E-value=57 Score=26.28 Aligned_cols=72 Identities=17% Similarity=0.227 Sum_probs=45.2
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
.+.|||..+|--|+++|..-.+.|.++++....+.. ......++..|.++..+.. -.+.++..+..++..++
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367889999999999999999999998876443322 1223445666777766542 12334444444444443
No 274
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=55.94 E-value=48 Score=27.42 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=24.7
Q ss_pred cEEEeeCCchHH---HHHHHHHHHCCCeEEEEeCCC
Q 023801 23 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPAS 55 (277)
Q Consensus 23 ~~vv~aSsGN~g---~a~A~aa~~~Gl~~~vvvp~~ 55 (277)
+.+|.+..||.| ..+|..-+..|.++.|+++..
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~ 116 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPKR 116 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEeCC
Confidence 567888888876 556666666799999987753
No 275
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=55.93 E-value=40 Score=27.52 Aligned_cols=73 Identities=14% Similarity=0.091 Sum_probs=46.1
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC---------CHH----HHHHHHHcCCEEEEeCC-CCChHHHHHH
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---------SLE----RRIILRAFGAELVLTDP-AKGMKGAVQK 86 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~---------~~~----~~~~~~~~Ga~v~~~~~-~~~~~~~~~~ 86 (277)
|.+.|||..+|--|+++|..-.+.|.+++++-.... ... ....++..|.+++.+.. -.+.++..+.
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 89 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESF 89 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 336789999999999999999999999777654311 122 23445667887766542 1234444444
Q ss_pred HHHHHHh
Q 023801 87 AEEILAK 93 (277)
Q Consensus 87 a~~~~~~ 93 (277)
.++..++
T Consensus 90 ~~~~~~~ 96 (281)
T 3s55_A 90 VAEAEDT 96 (281)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4444443
No 276
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=55.76 E-value=67 Score=25.68 Aligned_cols=72 Identities=10% Similarity=0.071 Sum_probs=42.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
..|||..+|.-|+++|..-.+.|.+++++...... ......++..|.++..+.. -.+.++..+...+..++.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999987766443211 1122344555766654432 123333344444444443
No 277
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=55.53 E-value=58 Score=26.26 Aligned_cols=71 Identities=20% Similarity=0.133 Sum_probs=45.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
+.|||..+|--|+++|..-.+.|.++++....... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 67888899999999999999999998776654322 2334555666776655532 12344444444444444
No 278
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=55.26 E-value=47 Score=27.12 Aligned_cols=54 Identities=17% Similarity=0.102 Sum_probs=43.0
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
|+..|||..++--|+++|..-.+.|.++++.- .+......+.++..|.++..+.
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~-r~~~~~~~~~~~~~g~~~~~~~ 62 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAA-RRAPDETLDIIAKDGGNASALL 62 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE-SSCCHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEe-CCcHHHHHHHHHHhCCcEEEEE
Confidence 44778999999999999999999999977654 3445677888899998876654
No 279
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=55.26 E-value=86 Score=26.25 Aligned_cols=144 Identities=12% Similarity=0.117 Sum_probs=73.8
Q ss_pred HHHHHHHHHc-CCCCCCCcEEEeeCCchHHHHHHH--HHHHCCCeEEEEeCCCC-------------CH-----HHHHHH
Q 023801 6 YSMISDAEAK-GLITPGESVLIEPTSGNTGIGLAF--MAAAKQYRLIITMPASM-------------SL-----ERRIIL 64 (277)
Q Consensus 6 ~~~v~~a~~~-g~l~~g~~~vv~aSsGN~g~a~A~--aa~~~Gl~~~vvvp~~~-------------~~-----~~~~~~ 64 (277)
...+.+++++ +. ..|+-..+.....+++- .+...++|.+....... +. .-.+.+
T Consensus 62 ~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l 136 (364)
T 3lop_A 62 VRNVRDMARVDNP-----VALLTVVGTANVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITAL 136 (364)
T ss_dssp HHHHHHHHHHSCE-----EEEECCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCc-----EEEEecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHH
Confidence 3455566664 43 44555555566777777 88888998765431110 11 113344
Q ss_pred HHcCC-EEEEeCCCCChH-HHHHHHHHHHHhCCCeEec--CCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 023801 65 RAFGA-ELVLTDPAKGMK-GAVQKAEEILAKTPNAYML--QQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 140 (277)
Q Consensus 65 ~~~Ga-~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~ 140 (277)
..+|. +|.++.....+. +..+..++..++. +...+ ..+. +. ..-+......|.+ ..||+||++. ++..
T Consensus 137 ~~~g~~~iaii~~~~~~g~~~~~~~~~~~~~~-G~~v~~~~~~~-~~--~~d~~~~~~~l~~---~~~d~v~~~~-~~~~ 208 (364)
T 3lop_A 137 VTIGVTRIGVLYQEDALGKEAITGVERTLKAH-ALAITAMASYP-RN--TANVGPAVDKLLA---ADVQAIFLGA-TAEP 208 (364)
T ss_dssp HHTTCCCEEEEEETTHHHHHHHHHHHHHHHTT-TCCCSEEEEEC-TT--SCCCHHHHHHHHH---SCCSEEEEES-CHHH
T ss_pred HHcCCceEEEEEeCchhhHHHHHHHHHHHHHc-CCcEEEEEEec-CC--CccHHHHHHHHHh---CCCCEEEEec-CcHH
Confidence 55664 444443222222 2233334444444 22111 0111 00 0112222222222 4689988854 6677
Q ss_pred HHHHHHHHhhcCCCcEEEEEec
Q 023801 141 ITGAGKFLKEKNPNIKLYGIEP 162 (277)
Q Consensus 141 ~aGi~~~~~~~~~~~~vigV~~ 162 (277)
+.++.+.+++.+.++++++...
T Consensus 209 a~~~~~~~~~~g~~~~~i~~~~ 230 (364)
T 3lop_A 209 AAQFVRQYRARGGEAQLLGLSS 230 (364)
T ss_dssp HHHHHHHHHHTTCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCCeEEEecc
Confidence 8899999999887788877643
No 280
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=54.90 E-value=51 Score=25.60 Aligned_cols=44 Identities=9% Similarity=0.305 Sum_probs=33.7
Q ss_pred HHHHhhhCC-CCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCCC
Q 023801 118 PELWKGSGG-RIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 165 (277)
Q Consensus 118 ~Ei~~Q~~~-~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~~ 165 (277)
.|+.++... ..+.||+..|.-+.+.|+..++-. ..||||-+...
T Consensus 66 ~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~----~PVIgVP~~~~ 110 (182)
T 1u11_A 66 ADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTR----LPVLGVPVESR 110 (182)
T ss_dssp HHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCS----SCEEEEEECCT
T ss_pred HHHHHHHHhCCCcEEEEecCchhhhHHHHHhccC----CCEEEeeCCCC
Confidence 455555432 378999999999999999988753 57999987654
No 281
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=54.86 E-value=11 Score=28.10 Aligned_cols=97 Identities=13% Similarity=-0.021 Sum_probs=56.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH-HcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 101 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~-~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 101 (277)
.+++....|..|..+|...+..|.+++++-+. +.+...++ .+|..++..+..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~g~~~~~~d~~------------------------ 72 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKN---EYAFHRLNSEFSGFTVVGDAA------------------------ 72 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC---GGGGGGSCTTCCSEEEESCTT------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECC---HHHHHHHHhcCCCcEEEecCC------------------------
Confidence 34666778999999999999999887777543 23333333 445543322210
Q ss_pred CCCCCcchhhhhhchHHHHHhhh-CCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEe
Q 023801 102 QFENPANPKIHYETTGPELWKGS-GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIE 161 (277)
Q Consensus 102 ~~~~~~~~~~g~~t~~~Ei~~Q~-~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~ 161 (277)
. .+.+++. ....|.||++++.-....-+....+..++..++++..
T Consensus 73 ------~---------~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 73 ------E---------FETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp ------S---------HHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred ------C---------HHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 0 0111111 1246888888887655544445555556667776654
No 282
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=54.78 E-value=73 Score=25.89 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=47.1
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
|+..|||..+|--|+++|..-.+.|.++++....... ......++..|.++..+.. -.+.++..+...+..++.
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3467899999999999999999999997776443221 2234456677887766542 123444444444444443
No 283
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=54.71 E-value=76 Score=24.93 Aligned_cols=54 Identities=11% Similarity=0.217 Sum_probs=38.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH--HHHHHHHHcCCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~--~~~~~~~~~Ga~v~~~~ 75 (277)
.+.+|+..+|.-|+++|..-.+.|.+++++....... .....++..|.++..+.
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 61 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3678999999999999999999999877763333222 22345566677766553
No 284
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=54.68 E-value=63 Score=25.75 Aligned_cols=53 Identities=23% Similarity=0.098 Sum_probs=36.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEe
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLT 74 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~ 74 (277)
...|||..+|.-|+++|..-.+.|.+++++...... ......++..|.++..+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 61 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVL 61 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 367999999999999999999999987776443211 11123444557666554
No 285
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=54.64 E-value=55 Score=28.04 Aligned_cols=51 Identities=12% Similarity=-0.054 Sum_probs=37.3
Q ss_pred EEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCC----CHHHHHHHHH------cCCEEEEeC
Q 023801 25 LIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM----SLERRIILRA------FGAELVLTD 75 (277)
Q Consensus 25 vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~----~~~~~~~~~~------~Ga~v~~~~ 75 (277)
|+-... .|.++|++.+++++|++++++-|++- ++.-+..++. .|+++..+.
T Consensus 164 va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~ 226 (328)
T 3grf_A 164 FAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH 226 (328)
T ss_dssp EEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred EEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc
Confidence 444444 59999999999999999999999854 2333333332 688898886
No 286
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=54.55 E-value=87 Score=25.56 Aligned_cols=42 Identities=21% Similarity=0.336 Sum_probs=25.3
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC--CcEEEEEe
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGIE 161 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~--~~~vigV~ 161 (277)
.+++++.++.||+|||. +.....|+..++++.+. ++.|+|++
T Consensus 179 ~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vig~d 222 (313)
T 3m9w_A 179 ENALTANNNKIDAVVAS--NDATAGGAIQALSAQGLSGKVAISGQD 222 (313)
T ss_dssp HHHHHHTTTCCCEEEES--SHHHHHHHHHHHHTTTCTTTSEECCCS
T ss_pred HHHHHhCCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCcEEEecC
Confidence 34444332468888876 45566688888887653 34555443
No 287
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=54.51 E-value=1e+02 Score=26.40 Aligned_cols=105 Identities=21% Similarity=0.215 Sum_probs=65.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-..|+-|+++|..++.+|++++++-|...+ . ..+.+|++. +. +.+ ++.++- +...+.-
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~---~~~~~g~~~--~~---~l~-------ell~~a-DvV~l~~ 231 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSD-G---VERALGLQR--VS---TLQ-------DLLFHS-DCVTLHC 231 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCT-T---HHHHHTCEE--CS---SHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-h---hHhhcCCee--cC---CHH-------HHHhcC-CEEEEcC
Confidence 46888899999999999999999998777554322 1 124567642 22 222 233343 5554432
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHhh
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 150 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~--aGi~~~~~~ 150 (277)
-.++.. ...+..+.++++ +++.+++-+++|+.. ..+..++++
T Consensus 232 P~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 232 GLNEHN----HHLINDFTVKQM--RQGAFLVNTARGGLVDEKALAQALKE 275 (347)
T ss_dssp CCCTTC----TTSBSHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCHHH----HHHhHHHHHhcC--CCCCEEEECCCChHHhHHHHHHHHHh
Confidence 222222 123445677776 578999999999865 345566655
No 288
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=54.48 E-value=42 Score=29.02 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=30.3
Q ss_pred CCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC
Q 023801 18 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 54 (277)
Q Consensus 18 l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~ 54 (277)
+.++ ++|..-.+|..|+.++.+++++|++++++-|.
T Consensus 9 ~~~~-~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 9 LKFG-ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3455 45888899999999999999999999998764
No 289
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=54.44 E-value=21 Score=31.32 Aligned_cols=49 Identities=14% Similarity=0.031 Sum_probs=38.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.+|+.-..|.-|..+|..++.+|.+++++ +..+.+++.++.+|++.+.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~---D~~~~~l~~~~~lGa~~~~l 233 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGY---DVRPEVAEQVRSVGAQWLDL 233 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEE---CSSGGGHHHHHHTTCEECCC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHcCCeEEec
Confidence 35788888999999999999999986665 23345677778899987643
No 290
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=54.41 E-value=33 Score=28.23 Aligned_cols=54 Identities=17% Similarity=0.253 Sum_probs=39.0
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHH---HHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIIL---RAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~---~~~Ga~v~~~~~ 76 (277)
+.+|+..+|.-|.+++......|.+++++.....+ +.+...+ ...|.+++..|-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 64 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 64 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCS
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCC
Confidence 56889999999999999999999988887655332 4444433 345777766553
No 291
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=54.36 E-value=82 Score=27.00 Aligned_cols=93 Identities=12% Similarity=0.074 Sum_probs=52.8
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|-.-..|+-|.++|..++.+|+++.++-+.... ..+.. ... +. .++.++- +...+.-
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~--------~~~~~--~~~---sl-------~ell~~a-DvVil~v 230 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS--------GVDWI--AHQ---SP-------VDLARDS-DVLAVCV 230 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT--------TSCCE--ECS---SH-------HHHHHTC-SEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc--------ccCce--ecC---CH-------HHHHhcC-CEEEEeC
Confidence 46888899999999999999999998777554322 12322 111 22 2333443 5554432
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT 142 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a 142 (277)
-.++.. ...+..++++++ +++.+++-++.|+..-
T Consensus 231 P~t~~t----~~li~~~~l~~m--k~gailIN~aRG~vvd 264 (340)
T 4dgs_A 231 AASAAT----QNIVDASLLQAL--GPEGIVVNVARGNVVD 264 (340)
T ss_dssp --------------CHHHHHHT--TTTCEEEECSCC----
T ss_pred CCCHHH----HHHhhHHHHhcC--CCCCEEEECCCCcccC
Confidence 222222 233456778887 5788999999998653
No 292
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=54.28 E-value=73 Score=25.73 Aligned_cols=73 Identities=15% Similarity=0.108 Sum_probs=46.6
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 93 (277)
+...|||..+|.-|+++|..-.+.|.++++....... ......++..|.++..+... .+.++..+..++..++
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3367888899999999999999999998766444322 22344556778888766431 2334444444444443
No 293
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=53.94 E-value=60 Score=26.44 Aligned_cols=73 Identities=12% Similarity=0.119 Sum_probs=43.9
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
...||+..+|.-|+++|..-.+.|.+++++...... ......++..|.++..+.. -.+.++..+...+..++.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 367899999999999999999999987766443211 1123345555766654432 123333344444444444
No 294
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=53.91 E-value=43 Score=27.92 Aligned_cols=47 Identities=17% Similarity=0.076 Sum_probs=34.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEE
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 72 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~ 72 (277)
+++..-..|+-|+++|..++.+|.+++++-+. ..+...++.+|.+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~---~~~~~~~~~~g~~~~ 204 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARS---SAHLARITEMGLVPF 204 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCCeEE
Confidence 45777788999999999999999977776443 344555556777643
No 295
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=53.84 E-value=95 Score=25.79 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=24.9
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
+.||+|||. +...+.|+..++++.+- ++.|+|.+
T Consensus 238 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvvgfD 275 (339)
T 3h5o_A 238 PDCDALFCC--NDDLAIGALARSQQLGIAVPERLAIAGFN 275 (339)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CCCcEEEEC--ChHHHHHHHHHHHHcCCCCCCCEEEEEEC
Confidence 568999874 56677899999988762 46677665
No 296
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=53.73 E-value=64 Score=26.17 Aligned_cols=73 Identities=14% Similarity=0.001 Sum_probs=43.8
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
+...|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+..++..++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3467999999999999999999999987766443211 1122344556766654432 12334444444444444
No 297
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=53.63 E-value=65 Score=25.91 Aligned_cols=73 Identities=16% Similarity=0.105 Sum_probs=44.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 93 (277)
+...||+..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+... .+.++..+...+..++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 3367888888999999999999999987666433211 12234556678777665421 2333333444444333
No 298
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=53.60 E-value=27 Score=30.98 Aligned_cols=49 Identities=12% Similarity=0.128 Sum_probs=38.0
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.+|+.-..|.-|..+|..++.+|.+++++ +..+.+++.++.+|++.+.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~---D~~~~~l~~~~~~G~~~~~~ 239 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSAT---DVRPAAKEQVASLGAKFIAV 239 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE---CSSTTHHHHHHHTTCEECCC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEE---cCCHHHHHHHHHcCCceeec
Confidence 35888888999999999999999986655 22345677778899986554
No 299
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=53.55 E-value=84 Score=25.07 Aligned_cols=69 Identities=13% Similarity=0.053 Sum_probs=37.9
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe--CCCCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT--DPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~--~~~~~~~~~~~~a~~~~~~ 93 (277)
...|||..+|--|+++|..-.+.|.+++++-........ ..+.+|.++..+ |- .+.++..+..++..++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE--PAAELGAAVRFRNADV-TNEADATAALAFAKQE 78 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHhCCceEEEEccC-CCHHHHHHHHHHHHHH
Confidence 367899999999999999999999997776544322211 222335555444 43 2334444444444444
No 300
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=53.55 E-value=36 Score=27.91 Aligned_cols=54 Identities=20% Similarity=0.216 Sum_probs=39.0
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC---CHHHHHHH---HHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---SLERRIIL---RAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~---~~~~~~~~---~~~Ga~v~~~~~ 76 (277)
+.+|+..+|+-|.+++......|.+++++..... .+.+...+ ...|.+++..|-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~ 65 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCT
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEecc
Confidence 5688999999999999999999988887765532 24444333 345777766653
No 301
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=53.53 E-value=1.1e+02 Score=27.41 Aligned_cols=97 Identities=14% Similarity=0.136 Sum_probs=62.1
Q ss_pred CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023801 16 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 95 (277)
Q Consensus 16 g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 95 (277)
+..-.| ++++....|+-|+++|..++.+|.+++++ +.++.+.......|.++. ++++ ..++ .
T Consensus 215 ~~~L~G-ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~---D~dp~ra~~A~~~G~~v~------~Lee-------al~~-A 276 (435)
T 3gvp_A 215 DMMFGG-KQVVVCGYGEVGKGCCAALKAMGSIVYVT---EIDPICALQACMDGFRLV------KLNE-------VIRQ-V 276 (435)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCEEC------CHHH-------HTTT-C
T ss_pred CceecC-CEEEEEeeCHHHHHHHHHHHHCCCEEEEE---eCChhhhHHHHHcCCEec------cHHH-------HHhc-C
Confidence 444456 56999999999999999999999986554 233445544556776542 2222 2222 2
Q ss_pred CeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 023801 96 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 140 (277)
Q Consensus 96 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~ 140 (277)
+.+...+. + ...+..|.++++ +++.+|+-+|.|..
T Consensus 277 DIVi~atg-t-------~~lI~~e~l~~M--K~gailINvgrg~~ 311 (435)
T 3gvp_A 277 DIVITCTG-N-------KNVVTREHLDRM--KNSCIVCNMGHSNT 311 (435)
T ss_dssp SEEEECSS-C-------SCSBCHHHHHHS--CTTEEEEECSSTTT
T ss_pred CEEEECCC-C-------cccCCHHHHHhc--CCCcEEEEecCCCc
Confidence 55544311 1 223556777887 57899999998864
No 302
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=53.52 E-value=30 Score=28.68 Aligned_cols=54 Identities=11% Similarity=0.068 Sum_probs=39.2
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-C--CHHHHH---HHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-M--SLERRI---ILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-~--~~~~~~---~~~~~Ga~v~~~~~ 76 (277)
+.+|+..+|+-|.+++..-...|.+++++.... . .+.+.. .++..|.+++..|-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~ 65 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecC
Confidence 568889999999999999999999988877653 1 133333 23456888877764
No 303
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=53.49 E-value=87 Score=25.23 Aligned_cols=42 Identities=10% Similarity=0.260 Sum_probs=29.1
Q ss_pred hHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC-CCcEEEEEe
Q 023801 116 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIE 161 (277)
Q Consensus 116 ~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~-~~~~vigV~ 161 (277)
...+++++- +.||+|||.... +.|+..++++.+ .++.|+|.+
T Consensus 190 ~~~~~l~~~-~~~~ai~~~~d~---a~g~~~al~~~g~~di~vig~d 232 (304)
T 3gbv_A 190 MLDDFFREH-PDVKHGITFNSK---VYIIGEYLQQRRKSDFSLIGYD 232 (304)
T ss_dssp HHHHHHHHC-TTCCEEEESSSC---THHHHHHHHHTTCCSCEEEEES
T ss_pred HHHHHHHhC-CCeEEEEEcCcc---hHHHHHHHHHcCCCCcEEEEeC
Confidence 334555443 578999987654 468889998877 467777775
No 304
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=53.48 E-value=86 Score=25.19 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=25.2
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
.+.|||..+|--|+++|..-.+.|.+++++-
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 41 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAG 41 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3678888889999999998888898776654
No 305
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=53.47 E-value=62 Score=26.21 Aligned_cols=74 Identities=19% Similarity=0.144 Sum_probs=44.7
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
+.+.||+..+|--|+++|....+.|.+++++...... ......++..|.++..+.. -.+.++..+...+..++.
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 3467899999999999999999999987776543211 1122345556776655432 123333344444444443
No 306
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=53.43 E-value=1.2e+02 Score=26.80 Aligned_cols=86 Identities=12% Similarity=-0.060 Sum_probs=48.9
Q ss_pred HHHHHHcCCCCCCCcEEEeeCCchHHHH--HHHHHHHCCCeEEEEeCCCCC-------------HHHHHHHHHcCCEEEE
Q 023801 9 ISDAEAKGLITPGESVLIEPTSGNTGIG--LAFMAAAKQYRLIITMPASMS-------------LERRIILRAFGAELVL 73 (277)
Q Consensus 9 v~~a~~~g~l~~g~~~vv~aSsGN~g~a--~A~aa~~~Gl~~~vvvp~~~~-------------~~~~~~~~~~Ga~v~~ 73 (277)
+..-.+++.+..|+..|||..|+--|++ +|.+-...|.+++++-..... ......++..|.++..
T Consensus 48 i~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 127 (418)
T 4eue_A 48 IDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKN 127 (418)
T ss_dssp HHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEE
Confidence 3344456666666667788878878888 444444458887766543221 2223355777877655
Q ss_pred eCC-CCChHHHHHHHHHHHHhC
Q 023801 74 TDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 74 ~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
+.. -.+.+...+...+..++.
T Consensus 128 ~~~Dvtd~~~v~~~v~~i~~~~ 149 (418)
T 4eue_A 128 FIEDAFSNETKDKVIKYIKDEF 149 (418)
T ss_dssp EESCTTCHHHHHHHHHHHHHTT
T ss_pred EEeeCCCHHHHHHHHHHHHHHc
Confidence 432 124444445555555555
No 307
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=53.22 E-value=40 Score=27.43 Aligned_cols=72 Identities=15% Similarity=0.142 Sum_probs=45.9
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
...|||..+|--|+++|..-.+.|.++++....... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 367888888999999999999999998776543221 2234456677877766542 12334444444444444
No 308
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=53.11 E-value=1e+02 Score=25.97 Aligned_cols=105 Identities=16% Similarity=0.081 Sum_probs=65.8
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeC-CCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP-ASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 101 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp-~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 101 (277)
++|..-..||-|.++|..++.+|++++++-+ .. ... ..+.+|++. ++ +.+ ++.++- +...++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~-~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvVil~ 209 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRA-SSS---DEASYQATF--HD---SLD-------SLLSVS-QFFSLN 209 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCC-CHH---HHHHHTCEE--CS---SHH-------HHHHHC-SEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCc-Chh---hhhhcCcEE--cC---CHH-------HHHhhC-CEEEEe
Confidence 4688889999999999999999998877755 33 322 334568753 22 222 233333 455443
Q ss_pred CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhh
Q 023801 102 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 150 (277)
Q Consensus 102 ~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~ 150 (277)
-..++.. ...+..+.++.+ +++.+++-+|+|+..- .+..+++.
T Consensus 210 ~p~~~~t----~~~i~~~~l~~m--k~gailIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 210 APSTPET----RYFFNKATIKSL--PQGAIVVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp CCCCTTT----TTCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred ccCchHH----HhhcCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 3323222 122335666666 5789999999997644 66667765
No 309
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=52.89 E-value=69 Score=25.66 Aligned_cols=55 Identities=20% Similarity=0.257 Sum_probs=38.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH--HHHHHHHHcCCEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTD 75 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~--~~~~~~~~~Ga~v~~~~ 75 (277)
+.+.||+..+|.-|+++|..-.+.|.+++++....... .....++..|.++..+.
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~ 77 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 77 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEE
Confidence 34678899999999999999999999877765522111 12344556687776553
No 310
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=52.78 E-value=92 Score=26.71 Aligned_cols=114 Identities=16% Similarity=0.091 Sum_probs=68.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-.-|+-|.++|..++.+|++++.+-|...+ .. ..+. ..+ +.+ ++.++- +...++-
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-----~~-~~~~--~~~----~l~-------ell~~a-DvV~l~~ 208 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP-----EF-EPFL--TYT----DFD-------TVLKEA-DIVSLHT 208 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG-----GG-TTTC--EEC----CHH-------HHHHHC-SEEEECC
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh-----hh-hccc--ccc----CHH-------HHHhcC-CEEEEcC
Confidence 46888899999999999999999998888665422 11 1122 122 122 333443 4554433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhhcCCCcEEEEEecCC
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKEKNPNIKLYGIEPTE 164 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~~~~~~~vigV~~~~ 164 (277)
-.++.+ +..+..+.+.++ +++.+++-+|.|+..- .+..++++.. +.=.+.++..
T Consensus 209 Plt~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g~--i~gA~LDV~~ 264 (343)
T 2yq5_A 209 PLFPST----ENMIGEKQLKEM--KKSAYLINCARGELVDTGALIKALQDGE--IAGAGLDTLA 264 (343)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHHTS--SSCEEESCCT
T ss_pred CCCHHH----HHHhhHHHHhhC--CCCcEEEECCCChhhhHHHHHHHHHcCC--CcEEEecccc
Confidence 223322 234456778888 5789999999998753 4445555422 2224555443
No 311
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=52.74 E-value=22 Score=28.80 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=27.0
Q ss_pred CCcEEEeeC----------------CchHHHHHHHHHHHCCCeEEEEe
Q 023801 21 GESVLIEPT----------------SGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 21 g~~~vv~aS----------------sGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|.+.|||+. ||--|.++|.++...|.+++++-
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVS 55 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEE
Confidence 336678877 69999999999999999988874
No 312
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=52.58 E-value=62 Score=26.78 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=44.7
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
|...|||..+|--|+++|....+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 3467899999999999999999999987766443211 1223445566776655432 12334444444444443
No 313
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=52.55 E-value=94 Score=25.36 Aligned_cols=31 Identities=26% Similarity=0.360 Sum_probs=23.9
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
...|||..+|--|+++|..-.+.|.+++++-
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 64 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITG 64 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 3668888888888888888888888766653
No 314
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=52.52 E-value=52 Score=26.31 Aligned_cols=70 Identities=14% Similarity=0.122 Sum_probs=42.0
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHH-HHcCC--EEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGA--ELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~-~~~Ga--~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
|+..|||..+|--|+++|..-.+.|.+++++-.. ..+.+.+ +.++. ..+.+|- .+.++..+..++..++.
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATS---ESGAQAISDYLGDNGKGMALNV-TNPESIEAVLKAITDEF 81 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcccceEEEEeC-CCHHHHHHHHHHHHHHc
Confidence 3367888889999999999999999997776433 2332222 23333 3344443 24444444445554443
No 315
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=52.30 E-value=96 Score=25.39 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=25.2
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
+|..-.+|+.|.++|...+..|++++++-
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 46677899999999999999999888773
No 316
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=52.29 E-value=73 Score=25.30 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=45.7
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
+.|||..+|--|+++|..-.+.|.++++....... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 67888899999999999999999998776554321 2234456677877765542 12334444444444444
No 317
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=52.07 E-value=54 Score=26.36 Aligned_cols=73 Identities=11% Similarity=0.056 Sum_probs=44.9
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
|...|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3467888899999999999999999997766433211 1224455667877766542 12334444444444443
No 318
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=51.91 E-value=33 Score=28.16 Aligned_cols=74 Identities=16% Similarity=0.093 Sum_probs=43.4
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
+.+.||+..+|.-|+++|..-.+.|.+++++...... ......++..|.++..+.. -.+.++..+...+..++.
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 3467899999999999999998899887774322111 1123344555777655432 123333334444444443
No 319
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=51.88 E-value=62 Score=26.69 Aligned_cols=73 Identities=12% Similarity=0.081 Sum_probs=46.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC---CHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~---~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 93 (277)
|+..|||..+|--|+++|..-.+.|.+++++..... .......++..|.++..+... .+.++..+...+..++
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999998776543311 112234456778888776532 2333334444444443
No 320
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=51.81 E-value=46 Score=25.75 Aligned_cols=50 Identities=6% Similarity=0.098 Sum_probs=38.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
+.+|+..+|.-|++++......|.+++++... +.+...+...+.+++..|
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~D 51 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD---PQKAADRLGATVATLVKE 51 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHTCTTSEEEECC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec---ccccccccCCCceEEecc
Confidence 45899999999999999999999998887653 344544444577777665
No 321
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=51.61 E-value=97 Score=25.24 Aligned_cols=29 Identities=14% Similarity=0.311 Sum_probs=24.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEE
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIIT 51 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vv 51 (277)
+.|||..+|--|+++|..-.+.|.+++++
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGANIVLN 55 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 67888899999999999998899876655
No 322
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=51.39 E-value=1.1e+02 Score=25.67 Aligned_cols=146 Identities=13% Similarity=0.044 Sum_probs=76.7
Q ss_pred HHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC-----------------CCCH-----HHHHH
Q 023801 6 YSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-----------------SMSL-----ERRII 63 (277)
Q Consensus 6 ~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~-----------------~~~~-----~~~~~ 63 (277)
...+.+++++..+ ..|+-..+.....+++-.+...+++.+..... ..+. .-.+.
T Consensus 78 ~~~~~~l~~~~~v----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (386)
T 3sg0_A 78 AQNARKLLSEEKV----DVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKY 153 (386)
T ss_dssp HHHHHHHHHTSCC----SEEECCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCc----eEEECCCCchhHHHHHHHHHhcCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHHH
Confidence 4456666666321 45666666667778888899999998875321 0111 11334
Q ss_pred HHHcCC-EEEEeCCCCChH-HHHHHHHHHHHhCCCeEecCC-CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 023801 64 LRAFGA-ELVLTDPAKGMK-GAVQKAEEILAKTPNAYMLQQ-FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 140 (277)
Q Consensus 64 ~~~~Ga-~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~ 140 (277)
+..+|. +|.++.....+. +..+..++..++. +...+.. ...+. ..-+.....+|.+ ..||+||++. .+..
T Consensus 154 l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~--~~d~~~~~~~~~~---~~~dav~~~~-~~~~ 226 (386)
T 3sg0_A 154 IAKTGAKKVGYIGFSDAYGEGYYKVLAAAAPKL-GFELTTHEVYARS--DASVTGQVLKIIA---TKPDAVFIAS-AGTP 226 (386)
T ss_dssp HHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-TCEECCCEEECTT--CSCCHHHHHHHHH---TCCSEEEEEC-CSGG
T ss_pred HHhcCCCEEEEEecCchHHHHHHHHHHHHHHHc-CCEEEEEEeeCCC--CCcHHHHHHHHHh---cCCCEEEEec-Ccch
Confidence 455674 455553222222 2233334444443 2222211 00000 0112222223322 3689988754 5567
Q ss_pred HHHHHHHHhhcCCCcEEEEEec
Q 023801 141 ITGAGKFLKEKNPNIKLYGIEP 162 (277)
Q Consensus 141 ~aGi~~~~~~~~~~~~vigV~~ 162 (277)
..++.+.+++.+.++++++...
T Consensus 227 a~~~~~~~~~~g~~~~~~~~~~ 248 (386)
T 3sg0_A 227 AVLPQKALRERGFKGAIYQTHG 248 (386)
T ss_dssp GHHHHHHHHHTTCCSEEECCGG
T ss_pred HHHHHHHHHHcCCCCcEEeccc
Confidence 7899999999887788876643
No 323
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=51.39 E-value=26 Score=25.45 Aligned_cols=25 Identities=16% Similarity=0.154 Sum_probs=19.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCe
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYR 47 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~ 47 (277)
+++..-.+|+.|.+++......|.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~ 46 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYK 46 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE
Confidence 3466667799999999888778877
No 324
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=51.27 E-value=55 Score=27.02 Aligned_cols=73 Identities=15% Similarity=0.078 Sum_probs=43.8
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEE--eCCCCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL--TDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~--~~~~~~~~~~~~~a~~~~~~~ 94 (277)
+...|||..+|.-|+++|..-.+.|.+++++...... ......++..|.++.. +|- .+.++..+...+..++.
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDV-TDEDGIQAMVAQIESEV 109 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-TCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecC-CCHHHHHHHHHHHHHHc
Confidence 3467999999999999999999999987776443211 1123344555655543 443 23344444444444444
No 325
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=51.11 E-value=62 Score=27.86 Aligned_cols=56 Identities=13% Similarity=0.185 Sum_probs=39.0
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHH----HHHcCCEEEEeCC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTDP 76 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~----~~~~Ga~v~~~~~ 76 (277)
|.+..++.=.+|.++|++.+++++|++++++-|++- ++.-+.. .+..|+.+..+..
T Consensus 175 glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d 236 (339)
T 4a8t_A 175 DCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDD 236 (339)
T ss_dssp GCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECC
T ss_pred CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 333333333389999999999999999999999854 2222222 3567888887763
No 326
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=51.09 E-value=62 Score=25.60 Aligned_cols=31 Identities=6% Similarity=0.129 Sum_probs=26.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
+.|||..+|--|+++|..-.+.|.+++++-.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 6789999999999999999999998776643
No 327
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=51.01 E-value=80 Score=25.01 Aligned_cols=72 Identities=10% Similarity=0.161 Sum_probs=43.3
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH--HHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~--~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
.+.|||..+|--|+++|..-.+.|.+++++...+... .....++..|.++..+.. -.+.++..+..++..++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3678899999999999999999999887765422111 123345556766655432 12333333344444333
No 328
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=50.96 E-value=54 Score=25.97 Aligned_cols=54 Identities=9% Similarity=0.098 Sum_probs=36.6
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~ 75 (277)
.+.||+..+|.-|+++|..-.+.|.+++++...... ......++..|.++..+.
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 66 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR 66 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEE
Confidence 367888899999999999999999887766443211 112334555677665543
No 329
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=50.56 E-value=22 Score=29.99 Aligned_cols=52 Identities=17% Similarity=-0.045 Sum_probs=36.4
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..++..+- ..-.-.|+++......-...++.+|++++.++.
T Consensus 86 ~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~ 137 (363)
T 3ffh_A 86 ELIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQYRQNALIEGAEVREIPL 137 (363)
T ss_dssp GEEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHHHHHHHHHHTCEEEEEEC
T ss_pred hEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHHHHHHHHHcCCEEEEecC
Confidence 4788888888888877664 222224555555556667778889999999874
No 330
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=50.36 E-value=78 Score=24.00 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=29.3
Q ss_pred CCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCCC
Q 023801 127 RIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 165 (277)
Q Consensus 127 ~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~~ 165 (277)
.++.||+..|.-+.+.|+..++-. ..||||.+...
T Consensus 58 ~~~ViIa~AG~aa~LpgvvA~~t~----~PVIgVP~~~~ 92 (159)
T 3rg8_A 58 RPKLYITIAGRSNALSGFVDGFVK----GATIACPPPSD 92 (159)
T ss_dssp SCEEEEEECCSSCCHHHHHHHHSS----SCEEECCCCCC
T ss_pred CCcEEEEECCchhhhHHHHHhccC----CCEEEeeCCCC
Confidence 489999999999999999988753 57999987654
No 331
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=50.24 E-value=1e+02 Score=25.13 Aligned_cols=30 Identities=17% Similarity=0.314 Sum_probs=23.8
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEE
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIIT 51 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vv 51 (277)
...|||..+|--|+++|..-.+.|.+++++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~ 38 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVT 38 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 367888888889999998888888875553
No 332
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=50.22 E-value=93 Score=24.59 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=40.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--HHHHHHHHHcCCEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTD 75 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~ 75 (277)
+.+.|||..+|--|+++|..-.+.|.++++....... ......++..|.++..+.
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEe
Confidence 3367888888999999999999999988776554432 233455677788887664
No 333
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=50.18 E-value=31 Score=30.67 Aligned_cols=50 Identities=12% Similarity=-0.082 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 3 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 3 R~a~~~v~~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
|++++.++.+++ .|.--.| .+|+....||-|..+|-....+|.+++.+..
T Consensus 191 ~Gv~~~~~~~~~~~g~~l~g-k~vaVqG~GnVG~~aa~~L~e~GakVVavsD 241 (421)
T 1v9l_A 191 FGVAVATREMAKKLWGGIEG-KTVAIQGMGNVGRWTAYWLEKMGAKVIAVSD 241 (421)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-CEEEEECCSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcCC-CEEEEECcCHHHHHHHHHHHHCCCEEEEEEC
Confidence 577777777764 4432234 5688889999999999999999988886543
No 334
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=50.14 E-value=86 Score=24.53 Aligned_cols=72 Identities=11% Similarity=0.145 Sum_probs=43.8
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH--HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 94 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 94 (277)
+.+|+..+|--|+++|..-.+.|.++++....+... .....++..|.++..+... .+.++..+...+..++.
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 568888999999999999999999887754333211 1123445567777665421 23333333444444443
No 335
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=50.09 E-value=94 Score=25.19 Aligned_cols=69 Identities=9% Similarity=-0.006 Sum_probs=46.7
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
+.|||.+++--|+++|..-.+.|.++++.- ..+.+...+...+.++..+.. -.+.++..+...+..++.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFID---IDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 568999999999999999999999977753 345666667666766655432 124444444455555544
No 336
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=50.02 E-value=27 Score=30.28 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=30.6
Q ss_pred CCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC
Q 023801 18 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 54 (277)
Q Consensus 18 l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~ 54 (277)
+.+| ++|..-.+|..|+.++.+++++|++++++-|.
T Consensus 11 ~~~~-k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 11 ILPG-KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4456 45888899999999999999999999988764
No 337
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=50.01 E-value=67 Score=25.82 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=42.8
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH-HHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~-~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
...|||..+|.-|+++|..-.+.|.+++++....... .....++..|.++..+.. -.+.++..+...+..++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999877764332111 112344455766655432 12333333344444343
No 338
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=50.00 E-value=1.1e+02 Score=25.54 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=22.5
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
+.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 249 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD 286 (355)
T 3e3m_A 249 PDTDCIFCV--SDMPAFGLLSRLKSIGVAVPEQVSVVGFG 286 (355)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEECSS
T ss_pred CCCcEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 468888864 45566788888887652 45566554
No 339
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=49.80 E-value=79 Score=25.64 Aligned_cols=71 Identities=14% Similarity=0.139 Sum_probs=44.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
+.|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 67888899999999999999999987766433211 1223455666887766532 12334444444444444
No 340
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=49.73 E-value=69 Score=25.66 Aligned_cols=72 Identities=17% Similarity=0.142 Sum_probs=45.9
Q ss_pred cEEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCCCH--HHHHHH-HHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023801 23 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIIL-RAFGAELVLTDPA-KGMKGAVQKAEEILAKT 94 (277)
Q Consensus 23 ~~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~~~--~~~~~~-~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 94 (277)
..|||..+ |--|+++|..-.+.|.+++++....... ..+..+ +.+|.++..+... .+.++..+...+..++.
T Consensus 22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (267)
T 3gdg_A 22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF 99 (267)
T ss_dssp EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 66777777 7889999999999999888776554432 334444 3558777766431 24444445555555554
No 341
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=49.71 E-value=62 Score=26.43 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=39.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCC-CeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~G-l~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
+.+|+..+|+-|.+++......| .+++++....... +...+...|.+++..|-
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~-~~~~l~~~~~~~~~~D~ 60 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK-AAKELRLQGAEVVQGDQ 60 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH-HHHHHHHTTCEEEECCT
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH-HHHHHHHCCCEEEEecC
Confidence 57899999999999999888888 8888877654332 33445567888887764
No 342
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=49.71 E-value=86 Score=25.07 Aligned_cols=69 Identities=14% Similarity=0.099 Sum_probs=43.2
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHH-HHHHHcCCEEEEe--CCCCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLT--DPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~-~~~~~~Ga~v~~~--~~~~~~~~~~~~a~~~~~~~ 94 (277)
.+.|||..+|--|+++|..-.+.|.+++++-.. ..+. ...+.++.++..+ |- .+.++..+...+..++.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADID---IERARQAAAEIGPAAYAVQMDV-TRQDSIDAAIAATVEHA 80 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCT-TCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCCceEEEeeC-CCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999987766432 2332 2334455555444 32 24444444555555554
No 343
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=49.66 E-value=66 Score=27.86 Aligned_cols=54 Identities=13% Similarity=0.210 Sum_probs=38.7
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHH----HHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~----~~~~Ga~v~~~~~ 76 (277)
+..++.=.+|.++|++.+++++|++++++-|++- ++.-+.. .+..|+.+..+..
T Consensus 155 kva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d 214 (355)
T 4a8p_A 155 KVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDD 214 (355)
T ss_dssp EEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECC
T ss_pred EEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 3333333489999999999999999999999854 2222222 3567998888763
No 344
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=49.63 E-value=1e+02 Score=25.00 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=26.1
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
+.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 196 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D 233 (303)
T 3kke_A 196 DGPTAVVVA--SVNAAVGALSTALRLGLRVPEDLSIVGIN 233 (303)
T ss_dssp TSCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEc
Confidence 568999986 45677799999998762 57788875
No 345
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=49.63 E-value=84 Score=25.13 Aligned_cols=54 Identities=19% Similarity=0.301 Sum_probs=34.9
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HH-HHHHHHHc-CCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LE-RRIILRAF-GAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~-~~~~~~~~-Ga~v~~~~ 75 (277)
+..|||..+|--|+++|..-.+.|.+++++...... .. ....++.. |.++..+.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEE
Confidence 367888899999999999999999987665433211 11 12223332 76766654
No 346
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=49.61 E-value=68 Score=30.98 Aligned_cols=58 Identities=22% Similarity=0.288 Sum_probs=42.4
Q ss_pred CCCCCcEEEeeCCchHHHHHHHHHH-HCCCeEEEEeCCC---C--CHHHHHHHHHcCCEEEEeC
Q 023801 18 ITPGESVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPAS---M--SLERRIILRAFGAELVLTD 75 (277)
Q Consensus 18 l~~g~~~vv~aSsGN~g~a~A~aa~-~~Gl~~~vvvp~~---~--~~~~~~~~~~~Ga~v~~~~ 75 (277)
+.++++-+|+..+|-.|+++|..-. +.|.+.++++..+ . ....++.++..|++++.+.
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~ 590 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQA 590 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEE
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEE
Confidence 3456677888888999999998776 7899766665443 1 2345677888999987764
No 347
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=49.40 E-value=97 Score=24.57 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=24.6
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
+.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 180 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 217 (275)
T 3d8u_A 180 SSLNALVCS--HEEIAIGALFECHRRVLKVPTDIAIICLE 217 (275)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEESS
T ss_pred CCCCEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEecC
Confidence 468999875 55677899999988763 45677765
No 348
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=49.37 E-value=80 Score=25.10 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=36.7
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH--HHHHHHHHcCCEEEEeC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTD 75 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~--~~~~~~~~~Ga~v~~~~ 75 (277)
+.||+..+|.-|+++|..-.+.|.+++++.....+. .....++..|.++..+.
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~ 63 (261)
T 1gee_A 9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63 (261)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEE
Confidence 678888999999999999999999877765422111 12334555677776553
No 349
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=49.18 E-value=1.1e+02 Score=25.01 Aligned_cols=72 Identities=10% Similarity=0.115 Sum_probs=47.8
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC--------HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHH
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILA 92 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~ 92 (277)
...|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..+
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 89 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE 89 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999987776544321 2335556777888876642 1234444444455544
Q ss_pred h
Q 023801 93 K 93 (277)
Q Consensus 93 ~ 93 (277)
+
T Consensus 90 ~ 90 (285)
T 3sc4_A 90 Q 90 (285)
T ss_dssp H
T ss_pred H
Confidence 4
No 350
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=49.12 E-value=58 Score=26.43 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=45.7
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC---------CCHHH----HHHHHHcCCEEEEeCC-CCChHHHHHH
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---------MSLER----RIILRAFGAELVLTDP-AKGMKGAVQK 86 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~---------~~~~~----~~~~~~~Ga~v~~~~~-~~~~~~~~~~ 86 (277)
|.+.|||..+|--|+++|..-.+.|.+++++-... ....+ ...++..|.++..+.. -.+.++..+.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 89 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE 89 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 34678999999999999999999999977764321 11222 3345567777766542 1234444444
Q ss_pred HHHHHHh
Q 023801 87 AEEILAK 93 (277)
Q Consensus 87 a~~~~~~ 93 (277)
..+..++
T Consensus 90 ~~~~~~~ 96 (287)
T 3pxx_A 90 LANAVAE 96 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555444
No 351
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=48.99 E-value=1e+02 Score=24.59 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=25.8
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|...|||..+|--|+++|..-.+.|.+++++-
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLG 43 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 34678888889999999998888898866654
No 352
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=48.80 E-value=1e+02 Score=24.77 Aligned_cols=43 Identities=9% Similarity=0.129 Sum_probs=30.7
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEecC
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIEPT 163 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~~~ 163 (277)
.+++++ .+.||+|||. +...+.|+..++++.+. ++.|+|.+-.
T Consensus 181 ~~~l~~-~~~~~ai~~~--~d~~A~g~~~al~~~G~~vP~di~vvg~D~~ 227 (290)
T 2rgy_A 181 CQLLES-KAPFTGLFCA--NDTMAVSALARFQQLGISVPGDVSVIGYDDD 227 (290)
T ss_dssp HHHHHH-TCCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred HHHHhC-CCCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEeCCc
Confidence 344444 2579999974 56678899999998763 5779888743
No 353
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=48.58 E-value=45 Score=28.09 Aligned_cols=53 Identities=17% Similarity=0.228 Sum_probs=32.7
Q ss_pred cEEEeeCCchHHHHHHHHHHH----CCCeEEEEe-CCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAA----KQYRLIITM-PASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~----~Gl~~~vvv-p~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
..++..++|..+..++..+-. -|= -+++. +..........++..|++++.++.
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd-~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNK-NVLVVSTGTFSDRFADCLRSYGAQVDVVRP 117 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCC-EEEEECSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCC-eEEEEcCCcchHHHHHHHHHcCCceEEEec
Confidence 358888888888888877653 232 22333 222222223566788999998874
No 354
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=48.35 E-value=69 Score=26.12 Aligned_cols=71 Identities=13% Similarity=0.074 Sum_probs=44.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
..|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999987665433211 1224455666777765532 12334444444444444
No 355
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=48.12 E-value=50 Score=29.85 Aligned_cols=68 Identities=16% Similarity=0.153 Sum_probs=38.3
Q ss_pred ChhHHHHHHHHHHcCCCCCCCcEEEeeCCchHH-H--HHHHHHHHCCCeEEEEeCCCC-CH---HHHHHHHHcCCEEE
Q 023801 2 CRIGYSMISDAEAKGLITPGESVLIEPTSGNTG-I--GLAFMAAAKQYRLIITMPASM-SL---ERRIILRAFGAELV 72 (277)
Q Consensus 2 dR~a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g-~--a~A~aa~~~Gl~~~vvvp~~~-~~---~~~~~~~~~Ga~v~ 72 (277)
.|.+........++ +.++.+.+|.+..||.| - .+|..-+.. +++.+|++... +. ...+.++..|..+.
T Consensus 29 E~Ag~ava~~i~~~--~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~-~~V~v~~~~~~~~~~a~~~~~~~~~~g~~~~ 103 (475)
T 3k5w_A 29 ENAAMALERAVLQN--ASLGAKVIILCGSGDNGGDGYALARRLVGR-FRVLVFEMKLTKSPMCQLQKERAKKAGVVIK 103 (475)
T ss_dssp HHHHHHHHHHHHTT--SCTTCEEEEEECSSHHHHHHHHHHHHHBTT-BEEEEEESSCCCSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHH--cCCCCeEEEEECCCCCHHHHHHHHHHHHcC-CceEEEEeCCCCCHHHHHHHHHHHHCCCcEe
Confidence 34444444443332 22334678888888877 3 333333333 78888887532 22 24566677787765
No 356
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=48.11 E-value=64 Score=26.65 Aligned_cols=73 Identities=11% Similarity=0.171 Sum_probs=46.3
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC---------CCHHH----HHHHHHcCCEEEEeCC-CCChHHHHHH
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---------MSLER----RIILRAFGAELVLTDP-AKGMKGAVQK 86 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~---------~~~~~----~~~~~~~Ga~v~~~~~-~~~~~~~~~~ 86 (277)
|...|||..+|--|+++|..-.+.|.+++++-... ....+ ...++..|.++..+.. -.+.++..+.
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 107 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA 107 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 34678999999999999999999999988764321 11222 3455677887766542 1234444444
Q ss_pred HHHHHHh
Q 023801 87 AEEILAK 93 (277)
Q Consensus 87 a~~~~~~ 93 (277)
..+..++
T Consensus 108 ~~~~~~~ 114 (299)
T 3t7c_A 108 VDDGVTQ 114 (299)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 357
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=48.04 E-value=78 Score=25.30 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=36.5
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEe
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLT 74 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~ 74 (277)
+++.|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 68 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGT 68 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 3467899999999999999999999987776443211 11233445567666544
No 358
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=47.81 E-value=1.2e+02 Score=25.20 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=27.3
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
.+++++. +.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 239 ~~ll~~~-~~~~ai~~~--nd~~A~g~~~al~~~g~~vP~disvvg~D 283 (344)
T 3kjx_A 239 QAMLERS-PDLDFLYYS--NDMIAAGGLLYLLEQGIDIPGQIGLAGFN 283 (344)
T ss_dssp HHHHHHS-TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHhcC-CCCCEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 3444442 568999865 45677888888888763 45676664
No 359
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=47.66 E-value=91 Score=25.74 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=46.7
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHH-HHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhCC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDP-AKGMKGAVQKAEEILAKTP 95 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~-~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~~ 95 (277)
|+..|||.+++--|+++|..-.+.|.++++.-. ...++ ...+.+|.+++.+.. -.+.++..+...+..++.+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r---~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGR---RKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 447799999999999999999999998776532 23333 334566766654431 1344555555566656553
No 360
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=47.62 E-value=1e+02 Score=24.75 Aligned_cols=54 Identities=15% Similarity=0.135 Sum_probs=38.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHH-HHHHHHcCCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER-RIILRAFGAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~-~~~~~~~Ga~v~~~~ 75 (277)
.+.||+..+|.-|.++|..-...|.+++++........+ ...++.+|.++..+.
T Consensus 35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 89 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYK 89 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEE
Confidence 367888899999999999999999988777654433332 344455677665543
No 361
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=47.55 E-value=1.5e+02 Score=26.47 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=62.1
Q ss_pred CCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023801 16 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 95 (277)
Q Consensus 16 g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 95 (277)
+..-.| ++|+...-|+-|+++|..++.+|.+++++=+ .+.+.......|.++. +.++ +.++ .
T Consensus 206 g~~L~G-ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~---~p~~a~~A~~~G~~~~------sL~e-------al~~-A 267 (436)
T 3h9u_A 206 DVMIAG-KTACVCGYGDVGKGCAAALRGFGARVVVTEV---DPINALQAAMEGYQVL------LVED-------VVEE-A 267 (436)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCEEC------CHHH-------HTTT-C
T ss_pred CCcccC-CEEEEEeeCHHHHHHHHHHHHCCCEEEEECC---ChhhhHHHHHhCCeec------CHHH-------HHhh-C
Confidence 444445 5689999999999999999999998666533 4455555566787643 2222 2223 2
Q ss_pred CeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh
Q 023801 96 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 140 (277)
Q Consensus 96 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~ 140 (277)
+.+...+.. . ..+..|.+++| +++.||+-+|.|..
T Consensus 268 DVVilt~gt-~-------~iI~~e~l~~M--K~gAIVINvgRg~v 302 (436)
T 3h9u_A 268 HIFVTTTGN-D-------DIITSEHFPRM--RDDAIVCNIGHFDT 302 (436)
T ss_dssp SEEEECSSC-S-------CSBCTTTGGGC--CTTEEEEECSSSGG
T ss_pred CEEEECCCC-c-------CccCHHHHhhc--CCCcEEEEeCCCCC
Confidence 555543321 1 11224567777 57899999999875
No 362
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=47.49 E-value=45 Score=26.81 Aligned_cols=72 Identities=21% Similarity=0.255 Sum_probs=43.0
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
.+.|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367888889999999999999999987765433211 1122334455766665532 12334444444444444
No 363
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=47.05 E-value=1.2e+02 Score=25.00 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=27.8
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC--CcEEEEEe
Q 023801 117 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGIE 161 (277)
Q Consensus 117 ~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~--~~~vigV~ 161 (277)
..+++++..+.||+|||. +...+.|+..++++.+. ++.|+|++
T Consensus 187 ~~~ll~~~~~~~~aI~~~--nd~~A~g~~~al~~~G~~~di~vvg~D 231 (332)
T 2rjo_A 187 MQAWMTRFNSKIKGVWAA--NDDMALGAIEALRAEGLAGQIPVTGMD 231 (332)
T ss_dssp HHHHHHHHGGGEEEEEES--SHHHHHHHHHHHHHTTCBTTBCEECSB
T ss_pred HHHHHHhcCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCCEEEeec
Confidence 345555412468888874 45677888888888764 46666654
No 364
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=47.01 E-value=77 Score=25.27 Aligned_cols=69 Identities=16% Similarity=0.121 Sum_probs=42.5
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHH-HHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~-~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
.+.|||..+|--|+++|..-.+.|.+++++-.. ..+.+ ..+.++.++..+.. -.+.++..+...+..++
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 367889899999999999999999987666432 23333 23455666655432 12334444444444444
No 365
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=46.75 E-value=85 Score=25.11 Aligned_cols=54 Identities=15% Similarity=0.089 Sum_probs=36.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~ 75 (277)
...|||..+|--|+++|..-.+.|.+++++...... ......++..|.++..+.
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 60 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV 60 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEE
Confidence 367889899999999999999999887766432111 112334445577776553
No 366
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=46.69 E-value=1.1e+02 Score=24.43 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=22.5
Q ss_pred cEEEeeCCc-hHHHHHHHHHHHCCCeEEEEe
Q 023801 23 SVLIEPTSG-NTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 23 ~~vv~aSsG-N~g~a~A~aa~~~Gl~~~vvv 52 (277)
+.||+..+| --|.++|..-.+.|.+++++-
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~ 54 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISD 54 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEec
Confidence 556666666 489999988888888866653
No 367
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=46.69 E-value=40 Score=28.34 Aligned_cols=41 Identities=7% Similarity=-0.064 Sum_probs=32.3
Q ss_pred HcCCCCCCCcEEEeeCC---chHHHHHHHHHHHCCCeEEEEeCCCC
Q 023801 14 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAKQYRLIITMPASM 56 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSs---GN~g~a~A~aa~~~Gl~~~vvvp~~~ 56 (277)
+.|.++ | .+|+-... +|.++|++.+++++|++++++-|++-
T Consensus 140 ~~g~l~-g-l~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~ 183 (291)
T 3d6n_B 140 HFGEVK-D-LRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTL 183 (291)
T ss_dssp HHSCCT-T-CEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGG
T ss_pred HhCCcC-C-cEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchh
Confidence 457654 4 34555554 99999999999999999999999754
No 368
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=46.66 E-value=99 Score=24.72 Aligned_cols=71 Identities=7% Similarity=0.053 Sum_probs=43.5
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHH-HHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~-~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
|++.|||..+|--|+++|..-.+.|.+++++-.. +.+++.+ +.+|.++..+.. -.+.++..+...+..++.
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN---ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 3367899999999999999999999987766432 3333333 344666554432 123444444444444443
No 369
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=46.52 E-value=48 Score=28.20 Aligned_cols=53 Identities=9% Similarity=-0.059 Sum_probs=36.5
Q ss_pred EEEeeCCchHHHHHHHH-HHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFM-AAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~a-a~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.|+..++|..+..++.- .+.+.-.-.|+++......-...++..|++++.++.
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 150 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPW 150 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEee
Confidence 58888889999888842 222222224555555566667788899999999875
No 370
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=46.51 E-value=1.3e+02 Score=26.11 Aligned_cols=54 Identities=9% Similarity=0.038 Sum_probs=37.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH-----------------HHHHHHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-----------------ERRIILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~-----------------~~~~~~~~~Ga~v~~~~~ 76 (277)
.+|....+|..|+.++.+++++|++++++-+....+ .-++.++..+.++++...
T Consensus 20 ~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~ 90 (433)
T 2dwc_A 20 QKILLLGSGELGKEIAIEAQRLGVEVVAVDRYANAPAMQVAHRSYVGNMMDKDFLWSVVEREKPDAIIPEI 90 (433)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTTCHHHHHSSEEEESCTTCHHHHHHHHHHHCCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhcceEEECCCCCHHHHHHHHHHcCCCEEEECc
Confidence 456667778999999999999999998876542221 223344556777777654
No 371
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=46.44 E-value=52 Score=28.26 Aligned_cols=59 Identities=12% Similarity=0.152 Sum_probs=40.7
Q ss_pred CCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH----HHHHHHHHcCCEEEEeCC
Q 023801 17 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL----ERRIILRAFGAELVLTDP 76 (277)
Q Consensus 17 ~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~----~~~~~~~~~Ga~v~~~~~ 76 (277)
.+.+| .+|.|.+...+..++=..|...|.+..|++.++.|. .....+...|-.+.++..
T Consensus 138 ~I~~g-~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qGrltA~eL~~~GI~vtlI~D 200 (338)
T 3a11_A 138 RIEDG-DVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQGKITAKELASYGIPVIYVVD 200 (338)
T ss_dssp TCCTT-CEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHHHHHHHHHHHTTCCEEEECG
T ss_pred HhCCC-CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhhHHHHHHHHhCCCCEEEEeh
Confidence 34444 567777666666666667778888888888876653 224556778988888874
No 372
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=46.37 E-value=33 Score=30.52 Aligned_cols=51 Identities=8% Similarity=-0.070 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC
Q 023801 3 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 54 (277)
Q Consensus 3 R~a~~~v~~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~ 54 (277)
|++++.++.+++ .|.--+| .+|+....||-|..+|-...++|.+++.+...
T Consensus 193 ~Gv~~~~~~~~~~~g~~l~g-~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~ 244 (421)
T 2yfq_A 193 FGVAVVVRESAKRFGIKMED-AKIAVQGFGNVGTFTVKNIERQGGKVCAIAEW 244 (421)
T ss_dssp HHHHHHHHHHHHHTTCCGGG-SCEEEECCSHHHHHHHHHHHHTTCCEEECCBC
T ss_pred HHHHHHHHHHHHhcCCCccC-CEEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 567777777775 3331134 46888999999999999999999887765443
No 373
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=46.31 E-value=1.1e+02 Score=24.47 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=23.9
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
+.||+|||. +.....|+..++++.+. ++.|+|.+
T Consensus 183 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vvg~d 220 (285)
T 3c3k_A 183 VKPDAIFAI--SDVLAAGAIQALTESGLSIPQDVAVVGFD 220 (285)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CCCeEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 468999875 45677888888888753 45566654
No 374
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=46.30 E-value=71 Score=26.17 Aligned_cols=71 Identities=13% Similarity=0.053 Sum_probs=43.8
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
..|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++..+.. -.+.++..+...+..++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999987776433211 1123344456777665542 12334444444444444
No 375
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=46.29 E-value=65 Score=26.11 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=45.7
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC---------CCHHH----HHHHHHcCCEEEEeCC-CCChHHHHHH
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---------MSLER----RIILRAFGAELVLTDP-AKGMKGAVQK 86 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~---------~~~~~----~~~~~~~Ga~v~~~~~-~~~~~~~~~~ 86 (277)
|...|||..+|--|+++|..-.+.|.+++++-... ....+ ...++..|.++..+.. -.+.++..+.
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 92 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAA 92 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 34678999999999999999999999987764321 11222 3345566777766542 1233444444
Q ss_pred HHHHHHh
Q 023801 87 AEEILAK 93 (277)
Q Consensus 87 a~~~~~~ 93 (277)
..+..++
T Consensus 93 ~~~~~~~ 99 (278)
T 3sx2_A 93 LQAGLDE 99 (278)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 376
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=46.03 E-value=34 Score=28.71 Aligned_cols=54 Identities=15% Similarity=0.086 Sum_probs=33.8
Q ss_pred cEEEeeCCchHHHHHHHHHHHC---CCeEEEEeCCCCCHHHHH---HHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAK---QYRLIITMPASMSLERRI---ILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~---Gl~~~vvvp~~~~~~~~~---~~~~~Ga~v~~~~~ 76 (277)
..++..++|..+..++..+-.. +-.-.|+++....+.... .++..|++++.++.
T Consensus 61 ~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 120 (382)
T 4hvk_A 61 GTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPV 120 (382)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECB
T ss_pred CeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEecc
Confidence 3588888888888777665431 222345555544444433 44557999999974
No 377
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=46.03 E-value=1.5e+02 Score=26.86 Aligned_cols=123 Identities=13% Similarity=0.037 Sum_probs=68.7
Q ss_pred HHHHHHHCCCeEEE---------EeCCCCCH--HHHHHHHHcCCEEEEeCCCC---Ch-HHHHHHHHHHHHhCCC-eEec
Q 023801 37 LAFMAAAKQYRLII---------TMPASMSL--ERRIILRAFGAELVLTDPAK---GM-KGAVQKAEEILAKTPN-AYML 100 (277)
Q Consensus 37 ~A~aa~~~Gl~~~v---------vvp~~~~~--~~~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~~~~~~~~-~~~~ 100 (277)
+..+|+.+|.++.+ .-|..+.. .........|++.+...++. .| .++.+...+.+++-.. .+|-
T Consensus 283 ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~ 362 (500)
T 1a3w_A 283 LIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYL 362 (500)
T ss_dssp HHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhh
Confidence 55788899999764 22332211 13445556899999986532 23 3455444444332212 1111
Q ss_pred ------CC-CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCCC
Q 023801 101 ------QQ-FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 165 (277)
Q Consensus 101 ------~~-~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~~ 165 (277)
.. ...+......-...+.++.+++ ...+||+.+-+|.|.-=++ ...|...|+++.+...
T Consensus 363 ~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~--~a~aIv~~T~sG~ta~~is----r~RP~~pI~a~t~~~~ 428 (500)
T 1a3w_A 363 PNYDDMRNCTPKPTSTTETVAASAVAAVFEQ--KAKAIIVLSTSGTTPRLVS----KYRPNCPIILVTRCPR 428 (500)
T ss_dssp HHHHHHTTSCCSSCCHHHHHHHHHHHHHHHH--TCSCEEEECSSSHHHHHHH----HTCCSSCEEEEESCTT
T ss_pred hHHHhhhhccccccchHHHHHHHHHHHHHhc--CCCEEEEECCCchHHHHHH----hhCCCCCEEEEcCCHH
Confidence 00 0111121222334445777777 3568999999998765443 3468899999987654
No 378
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=46.02 E-value=39 Score=28.49 Aligned_cols=53 Identities=9% Similarity=0.008 Sum_probs=34.5
Q ss_pred EEEeeCCchHHHHHHHHHHHC---CCeEEEEeCCCCCHHHHH---HHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAK---QYRLIITMPASMSLERRI---ILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~---Gl~~~vvvp~~~~~~~~~---~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..++..+-.. .-.-.|+++......... .++..|++++.++.
T Consensus 63 ~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 121 (384)
T 1eg5_A 63 EIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPV 121 (384)
T ss_dssp GEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCB
T ss_pred eEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEcc
Confidence 478888888888887777651 112345556555544333 34778999999874
No 379
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=45.86 E-value=31 Score=29.47 Aligned_cols=110 Identities=9% Similarity=0.038 Sum_probs=61.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC-----------------CHHHHHHHHHcCCEEEEeCCCCChHHHHH
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-----------------SLERRIILRAFGAELVLTDPAKGMKGAVQ 85 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~-----------------~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~ 85 (277)
++|..-.+|-.|+.++.+|+++|++++++-+... ...++. ....+.+++.... +......
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~-~~~~~~D~v~~~~--~~~~~~~ 78 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDVIKEPEKLL-ELSKRVDAVLPVN--ENLACIE 78 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCTTTCHHHHH-HHHTSSSEEEECC--CCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCCCcCHHHHH-HHhcCCCEEEECC--CChhHHH
Confidence 3577778899999999999999999998854311 111221 2234566665543 1222333
Q ss_pred HHHHHHHhCCCeEecCCCCCCcc-hhhhhhchHHHHHhhhCC--------CCCEEEEecCCch
Q 023801 86 KAEEILAKTPNAYMLQQFENPAN-PKIHYETTGPELWKGSGG--------RIDALVSGIGTGG 139 (277)
Q Consensus 86 ~a~~~~~~~~~~~~~~~~~~~~~-~~~g~~t~~~Ei~~Q~~~--------~~d~iv~pvG~Gg 139 (277)
.+.++.++. +.. +.+ ++.. -..+-+....+++++.+- .+-.|+=|..+||
T Consensus 79 ~~~~~~~~~-~~~-~g~--~~~a~~~~~dK~~~k~~l~~~gip~~~~~~ig~P~vvKp~~g~g 137 (363)
T 4ffl_A 79 FLNSIKEKF-SCP-VLF--DFEAYRISRDKKKSKDYFKSIGVPTPQDRPSKPPYFVKPPCESS 137 (363)
T ss_dssp HHHHHGGGC-SSC-BCC--CHHHHHHHTSHHHHHHHHHHTTCCCCCBSCSSSCEEEECSSCCT
T ss_pred HHHHHHHHC-CCc-cCC--CHHHHHHhhCHHHHHHHHHhcCCCCCCceecCCCEEEEECCCCC
Confidence 444454443 322 111 1211 133556777788887631 1236666766554
No 380
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=45.80 E-value=30 Score=24.60 Aligned_cols=43 Identities=7% Similarity=-0.032 Sum_probs=28.4
Q ss_pred EEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCE
Q 023801 25 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE 70 (277)
Q Consensus 25 vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~ 70 (277)
++....|+.|..+|......|.+++++-. .+.+.+.++..|.+
T Consensus 9 v~I~G~G~iG~~~a~~l~~~g~~v~~~d~---~~~~~~~~~~~~~~ 51 (144)
T 2hmt_A 9 FAVIGLGRFGGSIVKELHRMGHEVLAVDI---NEEKVNAYASYATH 51 (144)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEES---CHHHHHTTTTTCSE
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhCCE
Confidence 44455699999999999999988776643 23444444334443
No 381
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=45.23 E-value=69 Score=23.28 Aligned_cols=96 Identities=10% Similarity=0.008 Sum_probs=55.7
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH---HcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEec
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR---AFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML 100 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~---~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 100 (277)
+++....|+.|..++..-...|.+++++-+.. +.+.+.++ ..|.+++.-+
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~--~~~~~~~~~~~~~~~~~i~gd------------------------- 57 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLP--EDDIKQLEQRLGDNADVIPGD------------------------- 57 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCC--HHHHHHHHHHHCTTCEEEESC-------------------------
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECCC--hHHHHHHHHhhcCCCeEEEcC-------------------------
Confidence 35666789999999999888888888775532 23222221 1233322221
Q ss_pred CCCCCCcchhhhhhchHHHHHhhh-CCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEE
Q 023801 101 QQFENPANPKIHYETTGPELWKGS-GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 160 (277)
Q Consensus 101 ~~~~~~~~~~~g~~t~~~Ei~~Q~-~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV 160 (277)
+.. .+.+++. -...|.||+.++.-..-.-+....+..++..+|+..
T Consensus 58 -----~~~---------~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 58 -----SND---------SSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp -----TTS---------HHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred -----CCC---------HHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 111 1122222 135788888887765555555666777777777764
No 382
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=45.17 E-value=84 Score=25.08 Aligned_cols=54 Identities=11% Similarity=-0.015 Sum_probs=36.0
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEe
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLT 74 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~~ 74 (277)
+.+.||+..+|--|+++|..-.+.|.+++++...... ......++..|.++..+
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 68 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGS 68 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEE
Confidence 3467888899999999999999999987776543211 11233345557666544
No 383
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=45.13 E-value=73 Score=25.79 Aligned_cols=50 Identities=20% Similarity=0.110 Sum_probs=34.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
+.|||..+|--|.++|..-.+.|.+++++....... ....+.++.++..+
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~ 56 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL--DDLVAAYPDRAEAI 56 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG--HHHHHHCTTTEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHhccCCceEE
Confidence 678888999999999999999999887775543222 22334555555444
No 384
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=44.66 E-value=1.3e+02 Score=24.68 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=41.8
Q ss_pred CCcEEEeeCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHH-HHcCC-EEEEeCCCCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSG--NTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGA-ELVLTDPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsG--N~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~-~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~ 93 (277)
|.+.|||..+| --|+++|..-.+.|.+++++-.......++..+ +..|. ..+.+|- .+.++..+...+..++
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDV-SDAESVDNMFKVLAEE 105 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCC-CCHHHHHHHHHHHHHH
Confidence 33567777776 788889999999999977765543333333333 33443 3344443 3444444445555444
No 385
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=44.51 E-value=1.2e+02 Score=24.06 Aligned_cols=67 Identities=24% Similarity=0.131 Sum_probs=43.4
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHH-HHcCCEEEEeCCCCChHHHHHHHHHHHH
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVLTDPAKGMKGAVQKAEEILA 92 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~-~~~Ga~v~~~~~~~~~~~~~~~a~~~~~ 92 (277)
.+.||+..+|--|+++|..-.+.|.+++++... ..+...+ +..|...+.+|-. +.++..+...+..+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~ 73 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAVGAHPVVMDVA-DPASVERGFAEALA 73 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTTCEEEECCTT-CHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCEEEEecCC-CHHHHHHHHHHHHH
Confidence 367999999999999999999999987776443 3333333 3447777777642 33333333444433
No 386
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=44.45 E-value=61 Score=29.12 Aligned_cols=64 Identities=14% Similarity=0.035 Sum_probs=36.6
Q ss_pred eEecCCCCCCcchhhhhhchHHHHHhhhC----------CCCCEEEEecC-CchhHHHHHHH----HhhcCCCcEEEEE
Q 023801 97 AYMLQQFENPANPKIHYETTGPELWKGSG----------GRIDALVSGIG-TGGTITGAGKF----LKEKNPNIKLYGI 160 (277)
Q Consensus 97 ~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~----------~~~d~iv~pvG-~Gg~~aGi~~~----~~~~~~~~~vigV 160 (277)
.++....+...||..||.+.|.|+.++.- ..++.+++-.+ +|||=+|+... +++.+|+..++.+
T Consensus 91 ~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~ 169 (451)
T 3ryc_A 91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEF 169 (451)
T ss_dssp GEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcceEEEE
Confidence 34555556666778899999998876641 12444444333 34455565554 4445665444443
No 387
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=44.44 E-value=98 Score=25.01 Aligned_cols=70 Identities=17% Similarity=0.152 Sum_probs=43.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHH-HHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~-~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
|.+.|||..+|--|+++|..-.+.|.+++++-. +..+.+ ..+.+|.++..+.. -.+.++..+...+..++
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGT---REDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 346788888899999999999999988776633 233333 34556777665542 12334444444444443
No 388
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=44.42 E-value=1.2e+02 Score=24.39 Aligned_cols=32 Identities=16% Similarity=0.208 Sum_probs=27.5
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
.+.||+..+|.-|+++|......|.+++++..
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence 36789999999999999999999998777654
No 389
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=44.38 E-value=1.2e+02 Score=24.06 Aligned_cols=72 Identities=11% Similarity=0.143 Sum_probs=43.5
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH-HHHHHH-HHcCCEEEEeCC-CCChHHHHHHHHHHHHhC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIIL-RAFGAELVLTDP-AKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~-~~~~~~-~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~ 94 (277)
+.||+..+|.-|+++|..-.+.|.+++++....... .....+ +.++.++..+.. -.+.++..+..++..++.
T Consensus 16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 678999999999999999999998877776533332 222233 334666654432 123333444444544444
No 390
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=44.37 E-value=79 Score=25.79 Aligned_cols=68 Identities=9% Similarity=0.085 Sum_probs=41.0
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHH-HHHHcCCEEE--EeCCCCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELV--LTDPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~-~~~~~Ga~v~--~~~~~~~~~~~~~~a~~~~~~ 93 (277)
+..|||..+|--|+++|..-.+.|.+++++-.. ..+.+ ..+.+|.++. .+|- .+.++..+...+..++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADID---GDAADAAATKIGCGAAACRVDV-SDEQQIIAMVDACVAA 100 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCSSCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCcceEEEecC-CCHHHHHHHHHHHHHH
Confidence 367888888999999999999999987776432 22322 2334455444 4443 2344444444444443
No 391
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=44.22 E-value=12 Score=31.84 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=38.6
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC-CHHHHHHHHHcCCEEEEeC
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTD 75 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~-~~~~~~~~~~~Ga~v~~~~ 75 (277)
+.|.++ |.+..++.=.+|.++|++.+++++|++++++-|++- ++..+. .+..|+.+..+.
T Consensus 148 ~~g~l~-glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~-~~~~g~~v~~~~ 208 (309)
T 4f2g_A 148 HRGPIR-GKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLV-DAESAPFYQVFD 208 (309)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGS-CGGGGGGEEECS
T ss_pred HhCCCC-CCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHH-HHHcCCeEEEEc
Confidence 457654 434333444489999999999999999999999753 222111 124566665554
No 392
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=44.19 E-value=42 Score=28.44 Aligned_cols=53 Identities=17% Similarity=0.128 Sum_probs=38.2
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..+|..+...+-.-.|++|..........++..|++++.++-
T Consensus 52 ~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~ 104 (367)
T 3nyt_A 52 YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDI 104 (367)
T ss_dssp EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECB
T ss_pred cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHcCCEEEEEec
Confidence 57778888888777776653333345666666666677778899999999874
No 393
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=44.17 E-value=1.2e+02 Score=24.20 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=26.2
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcC----CCcEEEEEec
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEP 162 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~----~~~~vigV~~ 162 (277)
+.||+|||. +.....|+..++++.+ .++.|+|.+-
T Consensus 199 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 237 (296)
T 3brq_A 199 AKFSALVAS--NDDMAIGAMKALHERGVAVPEQVSVIGFDD 237 (296)
T ss_dssp -CCSEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEESC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEeecC
Confidence 468999976 5667789999998876 3567888864
No 394
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=44.14 E-value=94 Score=24.83 Aligned_cols=76 Identities=17% Similarity=0.176 Sum_probs=45.5
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCc
Q 023801 59 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 138 (277)
Q Consensus 59 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~G 138 (277)
.-.+.+...|++|+.+..... ....+...++.++.+......+.| ... ......+..++.++. +.+|.+|..+|..
T Consensus 37 ~~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~D-l~~-~~~v~~~~~~~~~~~-g~id~li~nAg~~ 112 (267)
T 3gdg_A 37 EAARGCAEMGAAVAITYASRA-QGAEENVKELEKTYGIKAKAYKCQ-VDS-YESCEKLVKDVVADF-GQIDAFIANAGAT 112 (267)
T ss_dssp HHHHHHHHTSCEEEECBSSSS-SHHHHHHHHHHHHHCCCEECCBCC-TTC-HHHHHHHHHHHHHHT-SCCSEEEECCCCC
T ss_pred HHHHHHHHCCCeEEEEeCCcc-hhHHHHHHHHHHhcCCceeEEecC-CCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcC
Confidence 346666778999999875321 222344445544433333333333 222 344566777888877 6899999998854
No 395
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=43.95 E-value=53 Score=26.51 Aligned_cols=41 Identities=20% Similarity=0.356 Sum_probs=27.7
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC-CcEEEEEe
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP-NIKLYGIE 161 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~-~~~vigV~ 161 (277)
.+++++- +.||+|||. +...+.|+..++++.+. ++.|+|++
T Consensus 183 ~~ll~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~dv~vig~d 224 (290)
T 2fn9_A 183 EQILQAH-PEIKAIWCG--NDAMALGAMKACEAAGRTDIYIFGFD 224 (290)
T ss_dssp HHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTCEEECCB
T ss_pred HHHHHhC-CCCcEEEEC--CchHHHHHHHHHHHCCCCCeEEEEeC
Confidence 4444432 568999975 45667799999988763 56666654
No 396
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=43.74 E-value=1.4e+02 Score=27.08 Aligned_cols=54 Identities=20% Similarity=0.219 Sum_probs=40.2
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC-----CCHHHHHHHHHcCCEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-----MSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~-----~~~~~~~~~~~~Ga~v~~~~ 75 (277)
++.|||..+|--|.++|..-.+.|.+.++++... ........++..|+++..+.
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~ 298 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAA 298 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEE
Confidence 6789999999999999999889998555554332 12344667788999987764
No 397
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=43.70 E-value=1.1e+02 Score=24.68 Aligned_cols=72 Identities=15% Similarity=0.119 Sum_probs=43.9
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCC---EEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGA---ELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga---~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
.+.|||..+|--|+++|..-.+.|.+++++-..... ......++..|. ++..+.. -.+.++..+...+..++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999987766432211 122445566665 6655432 12334444444444443
No 398
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=43.60 E-value=1.4e+02 Score=25.32 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=67.7
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-..||-|.++|..++.+|++++++-+..... .|.. ... +.+ ++.++- +...+.-
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~--------~g~~--~~~---~l~-------ell~~a-DvVil~v 223 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN--------TNYT--YYG---SVV-------ELASNS-DILVVAC 223 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT--------CCSE--EES---CHH-------HHHHTC-SEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc--------cCce--ecC---CHH-------HHHhcC-CEEEEec
Confidence 357778899999999999999999988775543221 1432 122 222 233333 5554432
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHhhcCCCcEEEEEecC
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEPT 163 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~--aGi~~~~~~~~~~~~vigV~~~ 163 (277)
-.++.. ...+..|+++.+ +++.+++-+++|... ..+..++++. ..+-.+.+..
T Consensus 224 P~~~~t----~~li~~~~l~~m--k~gailIn~srG~~vd~~aL~~aL~~g--~i~ga~lDv~ 278 (333)
T 3ba1_A 224 PLTPET----THIINREVIDAL--GPKGVLINIGRGPHVDEPELVSALVEG--RLGGAGLDVF 278 (333)
T ss_dssp CCCGGG----TTCBCHHHHHHH--CTTCEEEECSCGGGBCHHHHHHHHHHT--SSCEEEESCC
T ss_pred CCChHH----HHHhhHHHHhcC--CCCCEEEECCCCchhCHHHHHHHHHcC--CCeEEEEecC
Confidence 222211 233445677777 467899999999876 5677777653 3455555543
No 399
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=43.58 E-value=91 Score=22.62 Aligned_cols=13 Identities=31% Similarity=0.575 Sum_probs=6.1
Q ss_pred HHHHHHHHHHcCC
Q 023801 5 GYSMISDAEAKGL 17 (277)
Q Consensus 5 a~~~v~~a~~~g~ 17 (277)
...++..+++.|.
T Consensus 30 G~~~~~~L~~~G~ 42 (138)
T 1y81_A 30 GNIILKDLLSKGF 42 (138)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCC
Confidence 3444455555443
No 400
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=43.44 E-value=74 Score=25.68 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=43.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH--HHHHHHHHcCCEEEEe--CCCCChHHHHHHHHHHHHh
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLT--DPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~--~~~~~~~~~Ga~v~~~--~~~~~~~~~~~~a~~~~~~ 93 (277)
..|||..+|--|+++|..-.+.|.+++++....... .....++..|.++..+ |- .+.++..+...+..++
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDV-ADFESCERCAEKVLAD 100 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecC-CCHHHHHHHHHHHHHH
Confidence 568888889999999999999999877765333211 1233445556665544 43 2444444445555444
No 401
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=43.37 E-value=1.3e+02 Score=24.36 Aligned_cols=72 Identities=15% Similarity=0.062 Sum_probs=43.1
Q ss_pred CcEEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
.+.|||..+ |--|+++|..-.+.|.+++++.........+..++. .| ...+.+|- .+.++..+...+..++.
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDV-SLDEDIKNLKKFLEENW 97 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence 356788776 889999999999999987776544322334444433 34 34444553 23444444445554444
No 402
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=43.29 E-value=1.6e+02 Score=25.28 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=73.0
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|-.-.-|+-|.++|..++.+|++++++-+...+.. ..+.+|++. ++ +.+ ++.++- +...++-
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvV~l~~ 228 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPE---LEKETGAKF--VE---DLN-------EMLPKC-DVIVINM 228 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHH---HHHHHCCEE--CS---CHH-------HHGGGC-SEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHH---HHHhCCCeE--cC---CHH-------HHHhcC-CEEEECC
Confidence 4688889999999999999999999777655443433 334457643 22 222 233443 5554433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHhhcCCCcEEEEEecCC
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEPTE 164 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~--aGi~~~~~~~~~~~~vigV~~~~ 164 (277)
-.++.+ ...+..+.+++| +++.+++-++.|+.. ..+..++++. ...-.+.++..
T Consensus 229 Plt~~t----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g--~i~ga~lDV~~ 284 (351)
T 3jtm_A 229 PLTEKT----RGMFNKELIGKL--KKGVLIVNNARGAIMERQAVVDAVESG--HIGGYSGDVWD 284 (351)
T ss_dssp CCCTTT----TTCBSHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHHT--SEEEEEESCCS
T ss_pred CCCHHH----HHhhcHHHHhcC--CCCCEEEECcCchhhCHHHHHHHHHhC--CccEEEeCCCC
Confidence 223322 234556888888 589999999999875 3445555542 24444555433
No 403
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=43.07 E-value=1.2e+02 Score=23.97 Aligned_cols=70 Identities=17% Similarity=0.129 Sum_probs=43.4
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHH-HHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~-~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 93 (277)
|...|||..+|--|+++|..-...|.+++++-. +..+. ...+.+|.++..+... .+.++..+...+..++
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDI---NAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 336788999999999999999999998766532 22332 3334557777766431 2333334444444443
No 404
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=43.06 E-value=81 Score=25.07 Aligned_cols=52 Identities=12% Similarity=0.048 Sum_probs=33.5
Q ss_pred CcEEEeeCCchHHHHHHHHHHH-CCCeEEEEeCCCCC-HHHHHHHHHcCCEEEE
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMS-LERRIILRAFGAELVL 73 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~~ 73 (277)
.+.||+..+|--|+++|..-.. .|.+++++...... ......++..|.++..
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~ 58 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF 58 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEE
Confidence 3678888999999999998888 89887766543211 1123344445554433
No 405
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=42.93 E-value=1.3e+02 Score=24.99 Aligned_cols=72 Identities=21% Similarity=0.236 Sum_probs=44.2
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH-HHHHHHHHcCC--EEEEe--CCCCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGA--ELVLT--DPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~-~~~~~~~~~Ga--~v~~~--~~~~~~~~~~~~a~~~~~~~ 94 (277)
.+.|||..+|--|.++|..-...|.+++++....... .....++..|. ++..+ |- .+.+...+...+..++.
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV-ASREGFKMAADEVEARF 85 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCT-TCHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCC-CCHHHHHHHHHHHHHhC
Confidence 3678999999999999999999999977765442211 12334444554 45444 43 23344444455555554
No 406
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=42.86 E-value=49 Score=28.12 Aligned_cols=51 Identities=8% Similarity=0.128 Sum_probs=33.7
Q ss_pred EEEeeCCchHHHHHHHHHHHC-CCeEEEEeCCCCCHH--HHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLE--RRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~-Gl~~~vvvp~~~~~~--~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..++..+-.- |= .|+++...... -...++..|++++.++.
T Consensus 87 ~v~~t~g~t~al~~~~~~~~~~gd--~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 140 (393)
T 1vjo_A 87 TIAVSGTGTAAMEATIANAVEPGD--VVLIGVAGYFGNRLVDMAGRYGADVRTISK 140 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCchHHHHHHHHHhccCCCC--EEEEEcCChhHHHHHHHHHHcCCceEEEec
Confidence 588888888888887776532 32 34444333333 45667889999998874
No 407
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=42.69 E-value=1e+02 Score=25.78 Aligned_cols=134 Identities=13% Similarity=0.063 Sum_probs=70.7
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCC----------------CCCHH-----HHHHHHHcCC-EEEEeCCCCC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA----------------SMSLE-----RRIILRAFGA-ELVLTDPAKG 79 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~----------------~~~~~-----~~~~~~~~Ga-~v~~~~~~~~ 79 (277)
...|+-..+.....+++-.+...++|.+.+... ..+.. -.+.+...|. +|.++.....
T Consensus 83 v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~ 162 (375)
T 4evq_A 83 ADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKAGLKKAVTVTWKYA 162 (375)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSH
T ss_pred ceEEEcCCccHHHHHHHHHHHHcCceEEecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHHHHHcCCcEEEEEecCch
Confidence 355666666677778888888999998754310 01111 1334445565 4544432122
Q ss_pred hH-HHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEE
Q 023801 80 MK-GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLY 158 (277)
Q Consensus 80 ~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vi 158 (277)
+. +..+..++..++.+..........+. ..-+......|.+ ..||+||+. +++....++.+.+++.+.++.++
T Consensus 163 ~~~~~~~~~~~~l~~~G~~v~~~~~~~~~--~~d~~~~~~~l~~---~~~dai~~~-~~~~~a~~~~~~~~~~g~~vp~~ 236 (375)
T 4evq_A 163 AGEEMVSGFKKSFTAGKGEVVKDITIAFP--DVEFQSALAEIAS---LKPDCVYAF-FSGGGALKFIKDYAAANLGIPLW 236 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECTT--CCCCHHHHHHHHH---HCCSEEEEE-CCTHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEEecCCC--CccHHHHHHHHHh---cCCCEEEEe-cCcchHHHHHHHHHHcCCCceEE
Confidence 21 23333444445553222111000000 0012222223322 258999986 45678889999999988888888
Q ss_pred EEe
Q 023801 159 GIE 161 (277)
Q Consensus 159 gV~ 161 (277)
+..
T Consensus 237 ~~~ 239 (375)
T 4evq_A 237 GPG 239 (375)
T ss_dssp EEG
T ss_pred ecC
Confidence 864
No 408
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=42.69 E-value=1.1e+02 Score=24.38 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=27.2
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
++.|||..+|.-|+++|..-.+.|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 36789999999999999999999998776644
No 409
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=42.62 E-value=1.3e+02 Score=24.15 Aligned_cols=42 Identities=10% Similarity=0.230 Sum_probs=30.2
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC--CcEEEEEe
Q 023801 117 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGIE 161 (277)
Q Consensus 117 ~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~--~~~vigV~ 161 (277)
..+++++- +.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 184 ~~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~~dv~vvGfD 227 (288)
T 1gud_A 184 ATNVLQRN-PNIKAIYCA--NDTMAMGVAQAVANAGKTGKVLVVGTD 227 (288)
T ss_dssp HHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTTSEEEEES
T ss_pred HHHHHHhC-CCceEEEEC--CCchHHHHHHHHHhcCCCCCeEEEEeC
Confidence 34555543 569999986 55677899999998763 57788875
No 410
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=42.62 E-value=1.2e+02 Score=23.91 Aligned_cols=51 Identities=12% Similarity=0.085 Sum_probs=35.8
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEe
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 74 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~ 74 (277)
.+.||+..+|.-|+++|..-.+.|.+++++......... ..+.+|.++..+
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~ 63 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--QAKKLGNNCVFA 63 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--HHHHHCTTEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHH--HHHHhCCceEEE
Confidence 467999999999999999999999998777554433222 223346655544
No 411
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=42.58 E-value=54 Score=28.17 Aligned_cols=54 Identities=13% Similarity=0.057 Sum_probs=38.7
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
..++..++|..+..++..+-..+-.-.|++|..........++..|+++++++-
T Consensus 54 ~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~ 107 (377)
T 3ju7_A 54 GAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIWCGLEPYFIDI 107 (377)
T ss_dssp SEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHHHTTCEEEEECB
T ss_pred CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec
Confidence 457888889888888776643333345666666666667778899999999874
No 412
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=42.49 E-value=1.7e+02 Score=26.52 Aligned_cols=31 Identities=13% Similarity=0.034 Sum_probs=27.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
.+|+....||-|..+|....++|.+++.+..
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~GakVVavsD 275 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRFGAKCITVGE 275 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEEc
Confidence 5689999999999999999999998887653
No 413
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=42.49 E-value=97 Score=25.04 Aligned_cols=68 Identities=15% Similarity=-0.002 Sum_probs=42.8
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
..|||..+|--|+++|..-.+.|.+++++-.. ..+++.+.......+.+|- .+.++..+...+..++.
T Consensus 18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 18 LVVITGASSGIGEAIARRFSEEGHPLLLLARR---VERLKALNLPNTLCAQVDV-TDKYTFDTAITRAEKIY 85 (266)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHTTCCTTEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHhhcCCceEEEecC-CCHHHHHHHHHHHHHHC
Confidence 67899999999999999999999988776432 3444433323444555554 24444444444444443
No 414
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=42.46 E-value=61 Score=27.40 Aligned_cols=52 Identities=8% Similarity=-0.059 Sum_probs=37.9
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.|+..++|..+..++..+- ..-.-.|+++......-...++..|++++.++.
T Consensus 87 ~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 138 (391)
T 3dzz_A 87 WCVFASGVVPAISAMVRQF-TSPGDQILVQEPVYNMFYSVIEGNGRRVISSDL 138 (391)
T ss_dssp GEEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCHHHHHHHHHTTCEEEECCC
T ss_pred HEEECCCHHHHHHHHHHHh-CCCCCeEEECCCCcHHHHHHHHHcCCEEEEeee
Confidence 4788888888888777765 322235666776667777788889999998874
No 415
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=42.44 E-value=95 Score=25.28 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=42.8
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHH-HHHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~-~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
+...|||..+|--|+++|..-.+.|.+++++-.. ..+.. ..+.+|.++..+.. -.+.++..+...+..++
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN---EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3467889999999999999999999987776432 23322 33445666655432 12334444444444443
No 416
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=42.40 E-value=81 Score=25.70 Aligned_cols=69 Identities=23% Similarity=0.152 Sum_probs=43.4
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHH-HHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~-~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
...|||..+|--|+++|..-.+.|.+++++-.. ..+.+. .+.+|.++..+.. -.+.++..+...+..++
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKS---AERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC---HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 367899999999999999999999987776432 333333 3456666655432 12444444444554444
No 417
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=42.29 E-value=1.3e+02 Score=24.08 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=26.4
Q ss_pred CCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEec
Q 023801 127 RIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIEP 162 (277)
Q Consensus 127 ~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~~ 162 (277)
.||+|||. +...+.|+..++++.+. ++.|+|.+-
T Consensus 188 ~~~ai~~~--~d~~a~g~~~al~~~G~~vP~di~vig~d~ 225 (287)
T 3bbl_A 188 RPTAIMTL--NDTMAIGAMAAARERGLTIGTDLAIIGFDD 225 (287)
T ss_dssp SCSEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESC
T ss_pred CCcEEEEC--CcHHHHHHHHHHHHcCCCCCCCEEEEEECC
Confidence 68999985 56678899999998763 567888864
No 418
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=42.13 E-value=1.3e+02 Score=23.86 Aligned_cols=65 Identities=15% Similarity=0.112 Sum_probs=43.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
++.||+..+|.-|+++|..-.+.|.+++++...... +..|...+.+|-. +.++..+...+..++.
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~D~~-d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-------EQYPFATEVMDVA-DAAQVAQVCQRLLAET 72 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-------SCCSSEEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-------hcCCceEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 367899999999999999999999988776544321 2245666666642 4444444445554444
No 419
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=42.10 E-value=1.9e+02 Score=26.81 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=46.9
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCh-HHHHHHHHHHHHhC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM-KGAVQKAEEILAKT 94 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~-~~~~~~a~~~~~~~ 94 (277)
|...|||..++--|+++|....+.|.++++.- ..........++..|.+++.+.. +. .+..+...+..++.
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~-~~~~~~~~~~i~~~g~~~~~~~~--Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVND-FKDATKTVDEIKAAGGEAWPDQH--DVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEC-SSCCHHHHHHHHHTTCEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEEe-CccHHHHHHHHHhcCCeEEEEEc--ChHHHHHHHHHHHHHhc
Confidence 44568888888899999999999999876642 22344556677778888877653 45 44333344444443
No 420
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=42.08 E-value=60 Score=27.87 Aligned_cols=84 Identities=12% Similarity=0.039 Sum_probs=44.8
Q ss_pred EEEeeCCchHHHHHHHHHHHC---CCeEEEEeCCCCCHHHHHHH---HHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe
Q 023801 24 VLIEPTSGNTGIGLAFMAAAK---QYRLIITMPASMSLERRIIL---RAFGAELVLTDPAKGMKGAVQKAEEILAKTPNA 97 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~---Gl~~~vvvp~~~~~~~~~~~---~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~ 97 (277)
.++..++|..+..+|..+-.. +-.-.|+++..........+ +..|++++.++...++.-..+..++...+....
T Consensus 87 ~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 166 (423)
T 3lvm_A 87 EIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTIL 166 (423)
T ss_dssp GEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEE
T ss_pred eEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEE
Confidence 478888888888877765441 21234555555555444333 666999999975322110111222222233345
Q ss_pred EecCCCCCCc
Q 023801 98 YMLQQFENPA 107 (277)
Q Consensus 98 ~~~~~~~~~~ 107 (277)
+++.+..||.
T Consensus 167 v~~~~~~npt 176 (423)
T 3lvm_A 167 VSIMHVNNEI 176 (423)
T ss_dssp EECCSBCTTT
T ss_pred EEEeCCCCCC
Confidence 5665555554
No 421
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=41.77 E-value=1.4e+02 Score=24.21 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=26.6
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEec
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIEP 162 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~~ 162 (277)
+.||+|||. +...+.|+..++++.+. ++.|+|.+-
T Consensus 190 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~ 228 (306)
T 2vk2_A 190 KNICMVYAH--NDDMVIGAIQAIKEAGLKPGKDILTGSIDG 228 (306)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEEEC
T ss_pred CCeeEEEEC--CchHHHHHHHHHHHcCCCCCCCeEEEeecC
Confidence 468999985 56678899999988763 567888864
No 422
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=41.74 E-value=1.6e+02 Score=24.97 Aligned_cols=115 Identities=13% Similarity=0.086 Sum_probs=73.4
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|-.-..|+-|+.+|-.++.+|+++..+=|...+ .....|.+. + +.+ ++.++- +...++-
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~-----~~~~~~~~~--~----~l~-------ell~~s-Divslh~ 202 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE-----DLKEKGCVY--T----SLD-------ELLKES-DVISLHV 202 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-----HHHHTTCEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccch-----hhhhcCcee--c----CHH-------HHHhhC-CEEEEcC
Confidence 46888899999999999999999999988654321 223345432 2 222 334444 4444332
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHhhcCCCcEEEEEecCC
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEPTE 164 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~--aGi~~~~~~~~~~~~vigV~~~~ 164 (277)
--++. -+.-+..|.+++| +++.+++=+|-|+.+ ..+..+++. ....=.+.++..
T Consensus 203 Plt~~----T~~li~~~~l~~m--k~~a~lIN~aRG~iVde~aL~~aL~~--g~i~gA~LDV~~ 258 (334)
T 3kb6_A 203 PYTKE----THHMINEERISLM--KDGVYLINTARGKVVDTDALYRAYQR--GKFSGLGLDVFE 258 (334)
T ss_dssp CCCTT----TTTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT--TCEEEEEESCCT
T ss_pred CCChh----hccCcCHHHHhhc--CCCeEEEecCccccccHHHHHHHHHh--CCceEEEEeCCC
Confidence 22222 2456778888998 579999999999987 556666664 224444555443
No 423
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=41.67 E-value=64 Score=27.95 Aligned_cols=46 Identities=15% Similarity=0.188 Sum_probs=33.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHH-cCCEE
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGAEL 71 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~-~Ga~v 71 (277)
.+|+.-..|+-|.++|..++.+|.+++++-+ ++.+++.++. +|+++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~---~~~~l~~~~~~~g~~~ 215 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDI---NIDKLRQLDAEFCGRI 215 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeC---CHHHHHHHHHhcCCee
Confidence 3466666799999999999999997665532 4556665654 78865
No 424
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=41.60 E-value=1.5e+02 Score=24.57 Aligned_cols=145 Identities=12% Similarity=0.031 Sum_probs=75.6
Q ss_pred HHHHHHHHH-cCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC--------------CCH-----HHHHHHH
Q 023801 6 YSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS--------------MSL-----ERRIILR 65 (277)
Q Consensus 6 ~~~v~~a~~-~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~--------------~~~-----~~~~~~~ 65 (277)
...+.++++ .+. ..|+-..+.....+++-.+...+++.+.+.... .+. .-.+.+.
T Consensus 61 ~~~~~~li~~~~v-----~~iiG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 135 (368)
T 4eyg_A 61 KRLAQELIVNDKV-----NVIAGFGITPAALAAAPLATQAKVPEIVMAAGTSIITERSPYIVRTSFTLAQSSIIIGDWAA 135 (368)
T ss_dssp HHHHHHHHHTSCC-----SEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCc-----EEEECCCccHHHHHHHHHHHhCCceEEeccCCChhhccCCCCEEEecCChHHHHHHHHHHHH
Confidence 345566665 443 456666667778888889999999987653110 111 1233445
Q ss_pred HcCC-EEEEeCCCCChH-HHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHH
Q 023801 66 AFGA-ELVLTDPAKGMK-GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 143 (277)
Q Consensus 66 ~~Ga-~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aG 143 (277)
.+|. +|.++.....+. ...+...+..++.+..........+. ..-+.....+|.+ ..||+|++... +....+
T Consensus 136 ~~g~~~ia~i~~~~~~g~~~~~~~~~~l~~~g~~v~~~~~~~~~--~~d~~~~~~~l~~---~~~d~v~~~~~-~~~a~~ 209 (368)
T 4eyg_A 136 KNGIKKVATLTSDYAPGNDALAFFKERFTAGGGEIVEEIKVPLA--NPDFAPFLQRMKD---AKPDAMFVFVP-AGQGGN 209 (368)
T ss_dssp HTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECSS--SCCCHHHHHHHHH---HCCSEEEEECC-TTCHHH
T ss_pred HcCCCEEEEEecCchHhHHHHHHHHHHHHHcCCEEEEEEeCCCC--CCcHHHHHHHHHh---cCCCEEEEecc-chHHHH
Confidence 5665 454443211221 22333444445553222111000000 0112223333332 25899998543 447889
Q ss_pred HHHHHhhcCCC---cEEEEEe
Q 023801 144 AGKFLKEKNPN---IKLYGIE 161 (277)
Q Consensus 144 i~~~~~~~~~~---~~vigV~ 161 (277)
+.+.+++.+.. +.+++..
T Consensus 210 ~~~~~~~~g~~~~~v~~~~~~ 230 (368)
T 4eyg_A 210 FMKQFAERGLDKSGIKVIGPG 230 (368)
T ss_dssp HHHHHHHTTGGGTTCEEEEET
T ss_pred HHHHHHHcCCCcCCceEEecC
Confidence 99999887644 6677765
No 425
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=41.60 E-value=65 Score=28.26 Aligned_cols=52 Identities=13% Similarity=-0.000 Sum_probs=39.3
Q ss_pred EEEeeCCchHHHHHHHHHHH---------CCC---eEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAA---------KQY---RLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~---------~Gl---~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..+|..+.+ -|+ +-.|++|. ....-...++.+|++++.++.
T Consensus 105 ~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~ 168 (452)
T 2dgk_A 105 VGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM 168 (452)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCC
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEec
Confidence 36777888888888776543 453 24677888 777777888999999999985
No 426
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=41.38 E-value=97 Score=26.81 Aligned_cols=52 Identities=19% Similarity=0.174 Sum_probs=38.4
Q ss_pred EEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCC--CHHHHHH----HHHcCCEEEEeC
Q 023801 24 VLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTD 75 (277)
Q Consensus 24 ~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~--~~~~~~~----~~~~Ga~v~~~~ 75 (277)
+|+-... +|.++|+..+++++|++++++-|+.- ++.-+.. .+..|+++.++.
T Consensus 183 ~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~ 242 (358)
T 4h31_A 183 QFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTE 242 (358)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceecc
Confidence 4555543 58999999999999999999999753 3333332 345799998887
No 427
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=41.22 E-value=89 Score=25.07 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=27.1
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
...|||..+|.-|+++|..-.+.|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 36789999999999999999999998776643
No 428
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=41.06 E-value=1.3e+02 Score=23.70 Aligned_cols=73 Identities=19% Similarity=0.166 Sum_probs=44.1
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCC
Q 023801 59 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 137 (277)
Q Consensus 59 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~ 137 (277)
.-.+.+...|++|+.++. +.+...+...++.+.. ......+.| ... ......+..++.+++ +.+|.+|..+|.
T Consensus 24 ~~a~~l~~~G~~V~~~~r--~~~~~~~~~~~~~~~~-~~~~~~~~D-~~~-~~~~~~~~~~~~~~~-g~id~li~~Ag~ 96 (253)
T 3qiv_A 24 AYAEALAREGAAVVVADI--NAEAAEAVAKQIVADG-GTAISVAVD-VSD-PESAKAMADRTLAEF-GGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTT-CEEEEEECC-TTS-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEcC--CHHHHHHHHHHHHhcC-CcEEEEEcc-CCC-HHHHHHHHHHHHHHc-CCCCEEEECCCc
Confidence 345666678999999985 3333344444444433 333322332 223 334566667777777 689999999986
No 429
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=41.02 E-value=78 Score=26.56 Aligned_cols=52 Identities=4% Similarity=-0.046 Sum_probs=37.7
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.|+..++|..+..++..+- ..-.-.|+++...-..-...++..|++++.++-
T Consensus 84 ~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 135 (383)
T 3kax_A 84 WIVFSAGIVPALSTSIQAF-TKENESVLVQPPIYPPFFEMVTTNNRQLCVSPL 135 (383)
T ss_dssp GEEEESCHHHHHHHHHHHH-CCTTCEEEECSSCCHHHHHHHHHTTCEEEECCC
T ss_pred hEEEcCCHHHHHHHHHHHh-CCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccc
Confidence 4788888888887777664 222235666666666777888899999998874
No 430
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=41.02 E-value=23 Score=30.17 Aligned_cols=101 Identities=18% Similarity=0.147 Sum_probs=53.6
Q ss_pred CCchHHHHHHHHHHHCCCeEEEEeCC-CCCHH-----HHHHHHH--------cCCEEEEeCC--CCChHHHHHHHHHHHH
Q 023801 29 TSGNTGIGLAFMAAAKQYRLIITMPA-SMSLE-----RRIILRA--------FGAELVLTDP--AKGMKGAVQKAEEILA 92 (277)
Q Consensus 29 SsGN~g~a~A~aa~~~Gl~~~vvvp~-~~~~~-----~~~~~~~--------~Ga~v~~~~~--~~~~~~~~~~a~~~~~ 92 (277)
|||..|.++|-++.+.|..++++... ..++. ....++. .|..++.++. ..++.++.....+...
T Consensus 63 SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~ 142 (313)
T 1p9o_A 63 SSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAA 142 (313)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEEEEEEETTTSTTHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccceeeeccccHHHHHHHHHHHhhhhc
Confidence 67999999999999999999987643 22221 1111221 3444555432 2344444443333333
Q ss_pred hCCCeEecCCCCCCcchhhhhhchHHHHHhhhC--CCCCEEEEec
Q 023801 93 KTPNAYMLQQFENPANPKIHYETTGPELWKGSG--GRIDALVSGI 135 (277)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~--~~~d~iv~pv 135 (277)
+ +.....+|.+ ..-|-..-.++.+.+. +..|.+|.++
T Consensus 143 ~--~~l~~i~f~t----v~eyl~~L~~~~~~l~~~~~~di~i~aA 181 (313)
T 1p9o_A 143 A--GTFLVVEFTT----LADYLHLLQAAAQALNPLGPSAMFYLAA 181 (313)
T ss_dssp H--TCEEEEEECB----HHHHHHHHHHHHHHHGGGGGGEEEEECS
T ss_pred c--ccceeecccc----HHHHHHHHHHhhHHhhccCCCCEEEECC
Confidence 3 3455555543 3334444444433332 3467777665
No 431
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=40.90 E-value=72 Score=27.69 Aligned_cols=55 Identities=20% Similarity=0.189 Sum_probs=38.9
Q ss_pred CCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCC------CHH----HHHHHHHcCCEEEE
Q 023801 18 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM------SLE----RRIILRAFGAELVL 73 (277)
Q Consensus 18 l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~------~~~----~~~~~~~~Ga~v~~ 73 (277)
+.++ +.++.-.+|+.|.-+|...+++|.+++++.+... ++. -.+.++..|.+++.
T Consensus 142 ~~~~-~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 206 (408)
T 2gqw_A 142 LRPQ-SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF 206 (408)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhcC-CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEe
Confidence 3344 4588889999999999999999999999876532 221 23345666766654
No 432
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=40.90 E-value=1.3e+02 Score=23.96 Aligned_cols=50 Identities=20% Similarity=0.173 Sum_probs=34.5
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHH-HHHcCCEEEEe
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGAELVLT 74 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~-~~~~Ga~v~~~ 74 (277)
.+.||+..+|--|+++|....+.|.+++++-.. ..+... .+.+|.++..+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 56 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARELGDAARYQ 56 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTGGGEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceeEE
Confidence 367899999999999999999999987776433 233332 23345555443
No 433
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=40.90 E-value=1.4e+02 Score=23.87 Aligned_cols=73 Identities=21% Similarity=0.214 Sum_probs=43.4
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCC
Q 023801 59 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 137 (277)
Q Consensus 59 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~ 137 (277)
.-.+.+...|++|+.++. +.+...+...++.+.. ......+.| ... ......+..++.++. +.+|.+|..+|.
T Consensus 44 ~la~~l~~~G~~V~~~~r--~~~~~~~~~~~~~~~~-~~~~~~~~D-~~~-~~~v~~~~~~~~~~~-g~id~lv~~Ag~ 116 (262)
T 3rkr_A 44 AIARKLGSLGARVVLTAR--DVEKLRAVEREIVAAG-GEAESHACD-LSH-SDAIAAFATGVLAAH-GRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTT-CEEEEEECC-TTC-HHHHHHHHHHHHHHH-SCCSEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEEC--CHHHHHHHHHHHHHhC-CceeEEEec-CCC-HHHHHHHHHHHHHhc-CCCCEEEECCCc
Confidence 345566677999999985 3333334444444332 333332332 222 334556666777777 689999999986
No 434
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=40.84 E-value=1.2e+02 Score=23.37 Aligned_cols=43 Identities=9% Similarity=0.223 Sum_probs=32.3
Q ss_pred HHHhhhC-CCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCCC
Q 023801 119 ELWKGSG-GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 165 (277)
Q Consensus 119 Ei~~Q~~-~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~~ 165 (277)
|+.++.. ...+.||+..|.-+.+.|+..++- ...||||.+...
T Consensus 58 ~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~ 101 (174)
T 3kuu_A 58 SFAEQAEANGLHVIIAGNGGAAHLPGMLAAKT----LVPVLGVPVQSA 101 (174)
T ss_dssp HHHHHTTTTTCSEEEEEEESSCCHHHHHHHTC----SSCEEEEEECCT
T ss_pred HHHHHHHhCCCcEEEEECChhhhhHHHHHhcc----CCCEEEeeCCCC
Confidence 4544442 247899999999999999988864 358999987654
No 435
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=40.80 E-value=1.3e+02 Score=24.66 Aligned_cols=87 Identities=13% Similarity=0.188 Sum_probs=48.6
Q ss_pred eEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhh
Q 023801 47 RLIITMPASMS--LERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGS 124 (277)
Q Consensus 47 ~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~ 124 (277)
+.++|.-...- ..-.+.+...|++|+.++... ....+...+..++.+......+.| ... ......+..++.+++
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~D-v~d-~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE--EGDANETKQYVEKEGVKCVLLPGD-LSD-EQHCKDIVQETVRQL 123 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HHHHHHHHHHHHTTTCCEEEEESC-TTS-HHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHHHhcCCcEEEEECC-CCC-HHHHHHHHHHHHHHc
Confidence 45555443321 234566667899999987532 223333344444433323222222 222 344566677888887
Q ss_pred CCCCCEEEEecCCc
Q 023801 125 GGRIDALVSGIGTG 138 (277)
Q Consensus 125 ~~~~d~iv~pvG~G 138 (277)
+.+|.+|..+|..
T Consensus 124 -g~iD~lvnnAg~~ 136 (291)
T 3ijr_A 124 -GSLNILVNNVAQQ 136 (291)
T ss_dssp -SSCCEEEECCCCC
T ss_pred -CCCCEEEECCCCc
Confidence 6899999988753
No 436
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=40.68 E-value=28 Score=29.48 Aligned_cols=28 Identities=18% Similarity=0.141 Sum_probs=26.3
Q ss_pred EEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 25 LIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 25 vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|+...+|-.|.++|...++.|++++|+=
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEe
Confidence 7888999999999999999999999884
No 437
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=40.65 E-value=76 Score=27.33 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=32.8
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHH-cCCEEE
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGAELV 72 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~-~Ga~v~ 72 (277)
+|+.-..|+-|+++|..++.+|.+++++-+ ++.+++.++. +|+++.
T Consensus 168 ~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~---~~~~~~~~~~~~g~~~~ 214 (369)
T 2eez_A 168 SVVILGGGTVGTNAAKIALGMGAQVTILDV---NHKRLQYLDDVFGGRVI 214 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHhcCceEE
Confidence 455555699999999999999997666533 3455555544 787743
No 438
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=40.62 E-value=1.2e+02 Score=23.08 Aligned_cols=43 Identities=14% Similarity=0.298 Sum_probs=32.5
Q ss_pred HHHhhhCC-CCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCCC
Q 023801 119 ELWKGSGG-RIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 165 (277)
Q Consensus 119 Ei~~Q~~~-~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~~ 165 (277)
|+.++... ..+.||+..|.-+.+.|+..++-. ..||||.+...
T Consensus 49 ~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~----~PVIgVP~~~~ 92 (163)
T 3ors_A 49 QFASEARERGINIIIAGAGGAAHLPGMVASLTT----LPVIGVPIETK 92 (163)
T ss_dssp HHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCS----SCEEEEEECCT
T ss_pred HHHHHHHhCCCcEEEEECCchhhhHHHHHhccC----CCEEEeeCCCC
Confidence 45554432 378999999999999999988743 57999987654
No 439
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=40.58 E-value=1.1e+02 Score=24.79 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=39.9
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHH-HHHHcCCEEE--EeCCCCChHHHHHHHHHHHHh
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELV--LTDPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~-~~~~~Ga~v~--~~~~~~~~~~~~~~a~~~~~~ 93 (277)
..|||..+|--|+++|..-.+.|.+++++-.. ..+.+ ..+.++.++. .+|- .+.++..+...+..++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEIGDDALCVPTDV-TDPDSVRALFTATVEK 99 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHTSCCEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhCCCeEEEEecC-CCHHHHHHHHHHHHHH
Confidence 56888888999999999999999987665432 23332 2334444444 4443 2334444444444444
No 440
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=40.42 E-value=33 Score=29.37 Aligned_cols=29 Identities=17% Similarity=0.005 Sum_probs=26.9
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
+|+...+|-.|.++|..-++.|++++||=
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEe
Confidence 48889999999999999999999999983
No 441
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=40.30 E-value=82 Score=25.87 Aligned_cols=27 Identities=19% Similarity=0.316 Sum_probs=16.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCe
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYR 47 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~ 47 (277)
|.+.+|+..+|-.|+++|......|.+
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~ 145 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAE 145 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCE
Confidence 334455555666666666666666655
No 442
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=40.14 E-value=1.1e+02 Score=22.38 Aligned_cols=21 Identities=10% Similarity=-0.021 Sum_probs=8.6
Q ss_pred chHHHHHHHHHHHCCCeEEEE
Q 023801 31 GNTGIGLAFMAAAKQYRLIIT 51 (277)
Q Consensus 31 GN~g~a~A~aa~~~Gl~~~vv 51 (277)
-.....++-.|...|++.+++
T Consensus 87 ~~~~~~vv~~~~~~gi~~i~~ 107 (144)
T 2d59_A 87 PKLTMEYVEQAIKKGAKVVWF 107 (144)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEE
Confidence 334444443444444444333
No 443
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=40.04 E-value=1.2e+02 Score=26.32 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=36.7
Q ss_pred EEeeCCchHHHHHHHHHHHC--CCeEEEEeCCCCCHHHHHHHHHcCCEEEEeC
Q 023801 25 LIEPTSGNTGIGLAFMAAAK--QYRLIITMPASMSLERRIILRAFGAELVLTD 75 (277)
Q Consensus 25 vv~aSsGN~g~a~A~aa~~~--Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~ 75 (277)
++..++|+.+..++..+-.. . + .|++|.-.-..-...++..|++++.++
T Consensus 100 i~~t~G~~~al~~~~~~l~~~~~-d-~Vlv~~P~y~~~~~~~~~~g~~~~~v~ 150 (405)
T 3k7y_A 100 TIQCIGGTGAIFVLLEFLKMLNV-E-TLYVTNPPYINHVNMIESRGFNLKYIN 150 (405)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTTC-C-EEEEESSCCHHHHHHHHTTTCEEEEEC
T ss_pred EEEcCchHHHHHHHHHHHHhcCC-C-EEEEeCCCCHhHHHHHHHcCCeEEEEe
Confidence 57777888888887765544 5 4 455666666677788899999999986
No 444
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=40.04 E-value=1.6e+02 Score=24.51 Aligned_cols=118 Identities=19% Similarity=0.155 Sum_probs=66.8
Q ss_pred EEeeCCchHHHHHHHHHHHCC----CeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEec
Q 023801 25 LIEPTSGNTGIGLAFMAAAKQ----YRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML 100 (277)
Q Consensus 25 vv~aSsGN~g~a~A~aa~~~G----l~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 100 (277)
|..-..||.|.++|..-.+.| .+++++-+.. ...+.+.++.+|..+ .. +.. +..+.- +..++
T Consensus 25 I~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~-~~~~~~~l~~~G~~~--~~---~~~-------e~~~~a-DvVil 90 (322)
T 2izz_A 25 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM-DLATVSALRKMGVKL--TP---HNK-------ETVQHS-DVLFL 90 (322)
T ss_dssp EEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT-TSHHHHHHHHHTCEE--ES---CHH-------HHHHHC-SEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc-cHHHHHHHHHcCCEE--eC---ChH-------HHhccC-CEEEE
Confidence 666788999999999999999 5666553322 213566666788764 22 111 122333 55554
Q ss_pred CCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCC
Q 023801 101 QQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTE 164 (277)
Q Consensus 101 ~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~ 164 (277)
.-- |. ....+..+|...+ .++.+|+.+.+|-...-+...+....+..+++..-|..
T Consensus 91 av~--~~----~~~~vl~~l~~~l--~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~ 146 (322)
T 2izz_A 91 AVK--PH----IIPFILDEIGADI--EDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNT 146 (322)
T ss_dssp CSC--GG----GHHHHHHHHGGGC--CTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCG
T ss_pred EeC--HH----HHHHHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCc
Confidence 321 11 1223334443333 35778888877765554444555443456788776643
No 445
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=39.84 E-value=1.5e+02 Score=23.90 Aligned_cols=72 Identities=11% Similarity=-0.024 Sum_probs=45.2
Q ss_pred CcEEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 22 ESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 22 ~~~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
.+.|||..+ |--|+++|....+.|.+++++-........++.++. .| ..++.+|- .+.++..+...+..++.
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDV-SKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence 367888877 889999999999999987776554333445555543 34 34455554 24444444455555554
No 446
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=39.80 E-value=2.2e+02 Score=25.88 Aligned_cols=104 Identities=15% Similarity=0.157 Sum_probs=64.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-..|+-|.++|...+.+|++++++-|.. +.. ..+.+|++.. +.+ ++.++- +...++-
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~-~~~---~a~~~g~~~~------~l~-------e~~~~a-DvV~l~~ 204 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYV-SPA---RAAQLGIELL------SLD-------DLLARA-DFISVHL 204 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTS-CHH---HHHHHTCEEC------CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCC-Chh---HHHhcCcEEc------CHH-------HHHhcC-CEEEECC
Confidence 468888999999999999999999988775543 332 2455687542 122 223333 5555433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHHH--HHHHHhh
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG--AGKFLKE 150 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~aG--i~~~~~~ 150 (277)
-.++.. ...+..+++.++ +++.+++-++.|+...- +..++++
T Consensus 205 P~~~~t----~~~i~~~~~~~~--k~g~ilin~arg~iv~~~aL~~al~~ 248 (529)
T 1ygy_A 205 PKTPET----AGLIDKEALAKT--KPGVIIVNAARGGLVDEAALADAITG 248 (529)
T ss_dssp CCSTTT----TTCBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred CCchHH----HHHhCHHHHhCC--CCCCEEEECCCCchhhHHHHHHHHHc
Confidence 222222 122334566666 57899999999987655 4455543
No 447
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=39.72 E-value=1.3e+02 Score=24.46 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=27.2
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
+.+.+|+..+|--|.++|......|.+++++..
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR 60 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 346788889999999999999999998776654
No 448
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=39.67 E-value=1.2e+02 Score=25.00 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=44.0
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcC-CEEEEe--CCCCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFG-AELVLT--DPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~G-a~v~~~--~~~~~~~~~~~~a~~~~~~ 93 (277)
|.+.|||..+|--|.++|..-.+.|.+++++-..... ......++..| .++..+ |- .+.++..+...+..++
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-SDPGSCADAARTVVDA 116 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-CCHHHHHHHHHHHHHH
Confidence 3467888888999999999999999987776544322 23344555555 455443 32 2344444444444444
No 449
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=39.54 E-value=1.4e+02 Score=23.74 Aligned_cols=71 Identities=14% Similarity=0.037 Sum_probs=42.9
Q ss_pred cEEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHH-cCC-EEEEeCCCCChHHHHHHHHHHHHhC
Q 023801 23 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGA-ELVLTDPAKGMKGAVQKAEEILAKT 94 (277)
Q Consensus 23 ~~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~-~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~ 94 (277)
+.|||..+ |--|+++|..-.+.|.+++++-........+..+.. .|. .++.+|- .+.++..+...+..++.
T Consensus 11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDV-AEDASIDTMFAELGKVW 85 (265)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccC-CCHHHHHHHHHHHHHHc
Confidence 56888877 889999999999999987776544333344454433 332 3444443 23344444445554444
No 450
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=39.50 E-value=21 Score=30.21 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=43.2
Q ss_pred cEEEeeCCchHHHHHHHHHHH-CCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChH-HHHHHHHHHHHhCCCeEec
Q 023801 23 SVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK-GAVQKAEEILAKTPNAYML 100 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~ 100 (277)
..++..++|..+..++..+-. -|=++++.-|... .-...++.+|++++.++...++. +..+..+.+.+......++
T Consensus 86 ~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~ 163 (367)
T 3euc_A 86 MEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFV--MYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYL 163 (367)
T ss_dssp CEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSC--CSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEE
T ss_pred ceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHH--HHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEE
Confidence 357888888888877766542 2433333333322 23445678999999987432211 1111112222213466666
Q ss_pred CCCCCCc
Q 023801 101 QQFENPA 107 (277)
Q Consensus 101 ~~~~~~~ 107 (277)
....||.
T Consensus 164 ~~~~npt 170 (367)
T 3euc_A 164 AYPNNPT 170 (367)
T ss_dssp ESSCTTT
T ss_pred cCCCCCC
Confidence 5445554
No 451
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=39.49 E-value=1.7e+02 Score=24.51 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=26.1
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
+.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 267 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD 304 (366)
T 3h5t_A 267 PDLTAVLCT--VDALAFGVLEYLKSVGKSAPADLSLTGFD 304 (366)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred CCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 568999985 45667799999988763 57788886
No 452
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=39.48 E-value=1.5e+02 Score=23.84 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=26.6
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEec
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIEP 162 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~~ 162 (277)
+.||+|||. +...+.|+..++++.+. ++.|+|.+-
T Consensus 194 ~~~~ai~~~--~d~~A~g~~~al~~~G~~vP~di~vvg~D~ 232 (289)
T 2fep_A 194 KKPTAILSA--TDEMALGIIHAAQDQGLSIPEDLDIIGFDN 232 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred CCCCEEEEC--CHHHHHHHHHHHHHcCCCCCCCeEEEEECC
Confidence 468999975 55677899999988763 567888874
No 453
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=39.39 E-value=1e+02 Score=34.12 Aligned_cols=58 Identities=33% Similarity=0.487 Sum_probs=41.9
Q ss_pred HcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHH----cCCEEEEe
Q 023801 14 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA----FGAELVLT 74 (277)
Q Consensus 14 ~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~----~Ga~v~~~ 74 (277)
+.+.+++|.+.+|...+|--|.+....|+.+|.++++... ++.|++.++. +|++.++.
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~---s~~k~~~l~~~~~~lga~~v~~ 1722 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVG---SAEKRAYLQARFPQLDETCFAN 1722 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHCTTCCSTTEEE
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeC---ChhhhHHHHhhcCCCCceEEec
Confidence 5678899976555556799999999999999998666543 4466666664 56654443
No 454
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=39.33 E-value=95 Score=21.62 Aligned_cols=47 Identities=15% Similarity=0.069 Sum_probs=30.9
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH-HcCCEEEE
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVL 73 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~-~~Ga~v~~ 73 (277)
+++....|+.|..+|......|.+++++-+ ++.+...++ .+|.+++.
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~---~~~~~~~~~~~~~~~~~~ 53 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDI---DKDICKKASAEIDALVIN 53 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHCSSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHhcCcEEEE
Confidence 355557799999999998888988777643 334444443 24554433
No 455
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=39.19 E-value=46 Score=25.80 Aligned_cols=82 Identities=16% Similarity=0.187 Sum_probs=48.8
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhc--hHHHHHhhhC-CCCCEEEEecCCchhHHHHHHHH
Q 023801 72 VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYET--TGPELWKGSG-GRIDALVSGIGTGGTITGAGKFL 148 (277)
Q Consensus 72 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t--~~~Ei~~Q~~-~~~d~iv~pvG~Gg~~aGi~~~~ 148 (277)
++.++..|+ ..++.+.+..++. +..|-- ...-+| +| -.+|+.++.. ..++.||+..|.-+.+.|+..++
T Consensus 27 IimGS~SD~-~v~~~a~~~L~~~-gI~~e~-----~V~SAH-Rtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvvAa~ 98 (181)
T 4b4k_A 27 VIMGSTSDW-ETMKYACDILDEL-NIPYEK-----KVVSAH-RTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAK 98 (181)
T ss_dssp EEESSGGGH-HHHHHHHHHHHHT-TCCEEE-----EECCTT-TSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHTT
T ss_pred EEECCHhHH-HHHHHHHHHHHHc-CCCeeE-----EEEccc-cChHHHHHHHHHHHhcCceEEEEeccccccchhhHHhc
Confidence 444543343 3466666667777 432211 110112 22 1245555542 34899999999999999998775
Q ss_pred hhcCCCcEEEEEecCCC
Q 023801 149 KEKNPNIKLYGIEPTES 165 (277)
Q Consensus 149 ~~~~~~~~vigV~~~~~ 165 (277)
- ...||||-+...
T Consensus 99 T----~~PVIGVPv~s~ 111 (181)
T 4b4k_A 99 T----NLPVIGVPVQSK 111 (181)
T ss_dssp C----CSCEEEEECCCT
T ss_pred C----CCCEEEEecCCC
Confidence 3 358999988654
No 456
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=39.08 E-value=1e+02 Score=24.97 Aligned_cols=32 Identities=22% Similarity=0.160 Sum_probs=26.7
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
+...|||..+|.-|+++|....+.|.+++++-
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~ 60 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICA 60 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 33678999999999999999999998866653
No 457
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=39.07 E-value=44 Score=28.41 Aligned_cols=51 Identities=12% Similarity=0.139 Sum_probs=33.8
Q ss_pred EEEeeCCchHHHHHHHHHHH-CCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.|+..++|..+..++..+-. -| + .|+++......-...++.+|++++.++.
T Consensus 92 ~v~~~~g~~~a~~~~~~~~~~~g-d-~vl~~~~~~~~~~~~~~~~g~~~~~v~~ 143 (388)
T 1j32_A 92 NILVTNGGKQSIFNLMLAMIEPG-D-EVIIPAPFWVSYPEMVKLAEGTPVILPT 143 (388)
T ss_dssp GEEEESHHHHHHHHHHHHHCCTT-C-EEEEESSCCTHHHHHHHHTTCEEEEECC
T ss_pred hEEEcCCHHHHHHHHHHHhcCCC-C-EEEEcCCCChhHHHHHHHcCCEEEEecC
Confidence 47777888888888776652 23 2 3444444444455667889999988874
No 458
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=39.00 E-value=50 Score=24.62 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=28.5
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 55 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~ 55 (277)
.++.-.+|..|..+|...++.|.+++++-+..
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 48889999999999999999999999987553
No 459
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=38.96 E-value=65 Score=27.43 Aligned_cols=53 Identities=15% Similarity=0.091 Sum_probs=32.8
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHH--HHHHHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLE--RRIILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~--~~~~~~~~Ga~v~~~~~ 76 (277)
..++..++|..+..++..+- +.-.-.|+++...... -...++..|++++.++.
T Consensus 65 ~~v~~~~sgt~al~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 119 (411)
T 3nnk_A 65 WTMLVDGTSRAGIEAILVSA-IRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV 119 (411)
T ss_dssp EEEEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cEEEECCCcHHHHHHHHHHh-cCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEec
Confidence 34677777787777777665 3222234444333322 56677889999998874
No 460
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=38.93 E-value=89 Score=26.76 Aligned_cols=52 Identities=13% Similarity=0.009 Sum_probs=34.0
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.|+..++|..+..++..+- .+-.-.|+++......-...++.+|++++.++.
T Consensus 101 ~v~~t~g~~~a~~~~~~~~-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T 2x5d_A 101 EAIVTIGSKEGLAHLMLAT-LDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPL 152 (412)
T ss_dssp SEEEESCHHHHHHHHHHHH-CCTTCEEEEEESCCHHHHHHHHHHTCEEEEEEC
T ss_pred CEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchhHHHHHHHcCCEEEEeec
Confidence 3777788888887777664 222124455554455666677788999888764
No 461
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=38.84 E-value=1.5e+02 Score=23.64 Aligned_cols=74 Identities=24% Similarity=0.216 Sum_probs=43.8
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCc
Q 023801 59 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 138 (277)
Q Consensus 59 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~G 138 (277)
.-.+.+...|++|+.++. +.+...+...++.+..+...+ .+.| ... ......+..++.+++ +.+|.+|..+|..
T Consensus 27 ~ia~~l~~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~-~~~D-v~d-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 100 (256)
T 3gaf_A 27 AIAGTFAKAGASVVVTDL--KSEGAEAVAAAIRQAGGKAIG-LECN-VTD-EQHREAVIKAALDQF-GKITVLVNNAGGG 100 (256)
T ss_dssp HHHHHHHHHTCEEEEEES--SHHHHHHHHHHHHHTTCCEEE-EECC-TTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHHHCCCEEEEEeC--CHHHHHHHHHHHHhcCCcEEE-EECC-CCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 345556667999999985 223333344444333323222 2222 222 344566677888887 6899999999864
No 462
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=38.78 E-value=1.8e+02 Score=24.54 Aligned_cols=105 Identities=15% Similarity=0.093 Sum_probs=64.2
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
.+|..-..|+-|.++|..++.+|++++++-+...... ..+.+|.+.. +.++ +.++- +...+.-
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~~------~l~e-------~l~~a-DvVi~~v 218 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPE---EAAEFQAEFV------STPE-------LAAQS-DFIVVAC 218 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHH---HHHTTTCEEC------CHHH-------HHHHC-SEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchh---HHHhcCceeC------CHHH-------HHhhC-CEEEEeC
Confidence 4577788999999999999999999888876543332 2345665431 1222 22333 4444432
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchh--HHHHHHHHhh
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT--ITGAGKFLKE 150 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~--~aGi~~~~~~ 150 (277)
-.++.. ...+..++++.+ +++.+++-+++|.. ..-+...++.
T Consensus 219 p~~~~t----~~~i~~~~~~~m--k~gailIn~srg~~v~~~aL~~aL~~ 262 (330)
T 2gcg_A 219 SLTPAT----EGLCNKDFFQKM--KETAVFINISRGDVVNQDDLYQALAS 262 (330)
T ss_dssp CCCTTT----TTCBSHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH----HHhhCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHHHc
Confidence 222221 122335677777 46788899999854 3566777765
No 463
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=38.74 E-value=98 Score=25.07 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=26.9
Q ss_pred CcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 22 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 22 ~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
.+.|||..+|--|+++|..-.+.|.+++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 36788889999999999999999998777643
No 464
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=38.71 E-value=1.5e+02 Score=23.76 Aligned_cols=42 Identities=31% Similarity=0.418 Sum_probs=28.5
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC--CcEEEEEe
Q 023801 117 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGIE 161 (277)
Q Consensus 117 ~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~--~~~vigV~ 161 (277)
..+++++- +.||+|||. +.....|+..++++.+. ++.|+|.+
T Consensus 180 ~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~~dv~vig~d 223 (303)
T 3d02_A 180 TLDLMKTY-PDLKAVVSF--GSNGPIGAGRAVKEKRAKNKVAVYGMM 223 (303)
T ss_dssp HHHHHHHC-TTEEEEEES--STTHHHHHHHHHHHTTCTTTCEEEECC
T ss_pred HHHHHHhC-CCCCEEEEe--CCcchhHHHHHHHhcCCCCCeEEEEeC
Confidence 34555443 468888876 34567788999988764 57777764
No 465
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=38.70 E-value=1.2e+02 Score=23.42 Aligned_cols=37 Identities=5% Similarity=-0.032 Sum_probs=23.9
Q ss_pred HHHHHHHCCCeEEEEeCCCC---CHHHHHHHHHcCCEEEE
Q 023801 37 LAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVL 73 (277)
Q Consensus 37 ~A~aa~~~Gl~~~vvvp~~~---~~~~~~~~~~~Ga~v~~ 73 (277)
.+-.+...|.+.+++..... ...-++.++.+|.++..
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEE
Confidence 46677778888877743322 13345667788888765
No 466
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=38.66 E-value=21 Score=32.00 Aligned_cols=53 Identities=17% Similarity=0.118 Sum_probs=40.9
Q ss_pred EEEeeCCchHHHHHHHHHHHC------CC-eEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAK------QY-RLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~------Gl-~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..+|..+.+. |+ +-.|++|......-...++.+|++++.++.
T Consensus 128 ~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~ 187 (497)
T 3mc6_A 128 CGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVEL 187 (497)
T ss_dssp CEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECB
T ss_pred eEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEec
Confidence 477788888888888776542 53 136778888888888889999999999874
No 467
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=38.62 E-value=2e+02 Score=25.15 Aligned_cols=101 Identities=16% Similarity=0.155 Sum_probs=65.5
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcC-CEEEEeCCCCChHHHHHHHHHHHHhCCCeEecC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFG-AELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 101 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~G-a~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 101 (277)
++|-.-.-|+-|.++|..++.+|++++++=|..... .| ++ .+. +.+ ++.++- +...++
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--------~~~~~--~~~---~l~-------ell~~a-DvV~l~ 204 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP--------LGNAT--QVQ---HLS-------DLLNMS-DVVSLH 204 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC--------CTTCE--ECS---CHH-------HHHHHC-SEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc--------cCCce--ecC---CHH-------HHHhcC-CEEEEc
Confidence 468888999999999999999999998886643221 22 22 221 222 333443 555544
Q ss_pred CCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhHH--HHHHHHhh
Q 023801 102 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 150 (277)
Q Consensus 102 ~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~a--Gi~~~~~~ 150 (277)
--.++.+ ...+..+.++++ ++..+++-++.|+..- .+..+++.
T Consensus 205 ~P~t~~t----~~li~~~~l~~m--k~ga~lIN~aRg~~vd~~aL~~aL~~ 249 (404)
T 1sc6_A 205 VPENPST----KNMMGAKEISLM--KPGSLLINASRGTVVDIPALADALAS 249 (404)
T ss_dssp CCSSTTT----TTCBCHHHHHHS--CTTEEEEECSCSSSBCHHHHHHHHHT
T ss_pred cCCChHH----HHHhhHHHHhhc--CCCeEEEECCCChHHhHHHHHHHHHc
Confidence 3333332 223446777887 5799999999998765 56666665
No 468
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=38.61 E-value=1.5e+02 Score=23.63 Aligned_cols=71 Identities=13% Similarity=0.051 Sum_probs=42.2
Q ss_pred CcEEEeeCC--chHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHHHh
Q 023801 22 ESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 22 ~~~vv~aSs--GN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~ 93 (277)
.+.|||..+ |--|+++|..-.+.|.+++++........+.+.+.. .| ...+.+|- .+.++..+...+..++
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADV-TQDEELDALFAGVKEA 83 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCC-CCHHHHHHHHHHHHHH
Confidence 367888877 889999999998999987776544322334444433 34 44455553 2334433444444444
No 469
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=38.57 E-value=1.1e+02 Score=23.94 Aligned_cols=51 Identities=25% Similarity=0.227 Sum_probs=34.1
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH--HHHHHHHHcCCEEEE
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVL 73 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~--~~~~~~~~~Ga~v~~ 73 (277)
+.+|+..+|.-|+++|..-.+.|.+++++...+.+. .....++..|.++..
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~ 55 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVA 55 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEE
Confidence 568888999999999999999998877763333211 112334555665543
No 470
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=38.53 E-value=1.2e+02 Score=23.87 Aligned_cols=49 Identities=27% Similarity=0.289 Sum_probs=35.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
+.||+..+|.-|+++|..-.+.|.+++++.... .. ..+..|...+.+|-
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~--~~---~~~~~~~~~~~~D~ 52 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNP--EE---AAQSLGAVPLPTDL 52 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HH---HHHHHTCEEEECCT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--HH---HHHhhCcEEEecCC
Confidence 678999999999999999999999877765432 21 12333666666664
No 471
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=38.45 E-value=1.7e+02 Score=24.32 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=28.5
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
.+++++ .+.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 230 ~~ll~~-~~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvvGfD 274 (349)
T 1jye_A 230 MQMLNE-GIVPTAMLVA--NDQMALGAMRAITESGLRVGADISVVGYD 274 (349)
T ss_dssp HHHHHT-TCCCSEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEECSB
T ss_pred HHHHhC-CCCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCcEEEEEEC
Confidence 444444 2569999986 56678899999998763 45676665
No 472
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=38.44 E-value=1.5e+02 Score=25.14 Aligned_cols=54 Identities=11% Similarity=0.051 Sum_probs=37.6
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-----------------HHHHHHHHHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-----------------LERRIILRAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-----------------~~~~~~~~~~Ga~v~~~~~ 76 (277)
.+|....+|..|+.++.+++++|++++++-+.... ..-++.++..+.++++...
T Consensus 12 ~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~ 82 (391)
T 1kjq_A 12 TRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEI 82 (391)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCCchhhhccceEECCCCCHHHHHHHHHHcCCCEEEECC
Confidence 35666778899999999999999998877653211 1223445566778777754
No 473
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=38.40 E-value=38 Score=28.89 Aligned_cols=132 Identities=11% Similarity=0.040 Sum_probs=68.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHH--------HHHHHHcCCEEEEeCCCCChHHHHHH---HHHHH
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER--------RIILRAFGAELVLTDPAKGMKGAVQK---AEEIL 91 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~--------~~~~~~~Ga~v~~~~~~~~~~~~~~~---a~~~~ 91 (277)
..|..-.+|-.|.++|+.++..|++++++=+......+ +..+...|. .......++.... ...+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~----~~~~~~~~~~l~~i~~~~~l~ 82 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGS----LKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTC----CCSSSCHHHHHHTEEEECCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCC----CCCccCHHHHHhhcccccchH
Confidence 46888899999999999999999999998543211111 111111111 0000011111000 00111
Q ss_pred HhCCCeEecCCCCCCcchhhhhhchHHHHHhhhC--CCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCCCCc
Q 023801 92 AKTPNAYMLQQFENPANPKIHYETTGPELWKGSG--GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPV 167 (277)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~--~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~~~~ 167 (277)
+.-.+.-++.. .-|.+ .. +=.++++++. .++|.|+.+--|+=.++-++.+.+. .-|++|.-+.+.+.
T Consensus 83 ~a~~~ad~ViE-av~E~-l~----iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~---p~r~ig~HffNP~~ 151 (319)
T 3ado_A 83 EAVEGVVHIQE-CVPEN-LD----LKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAH---VKQCIVAHPVNPPY 151 (319)
T ss_dssp HHTTTEEEEEE-CCCSC-HH----HHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTT---GGGEEEEEECSSTT
T ss_pred hHhccCcEEee-ccccH-HH----HHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccC---CCcEEEecCCCCcc
Confidence 11112222211 11222 11 2235555553 3589999998888788777766542 34788887776654
No 474
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=38.35 E-value=1.5e+02 Score=23.76 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=41.5
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHH-Hc-CCEEEEeCCCCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AF-GAELVLTDPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~-~~-Ga~v~~~~~~~~~~~~~~~a~~~~~~ 93 (277)
++..||+..+|--|+++|..-.+.|.+++++-. .+.+.+.+. .. +...+.+|- .+.++..+..++..++
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK---DESGGRALEQELPGAVFILCDV-TQEDDVKTLVSETIRR 79 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHCTTEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhcCCeEEEcCC-CCHHHHHHHHHHHHHH
Confidence 346799999999999999999999998776633 233333332 22 344455553 2334433444444343
No 475
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=38.33 E-value=36 Score=26.96 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=27.6
Q ss_pred EEeeCCchHHHHHHHHHHHCCCeEEEEeCC
Q 023801 25 LIEPTSGNTGIGLAFMAAAKQYRLIITMPA 54 (277)
Q Consensus 25 vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~ 54 (277)
|+.-.+|..|.++|...++.|++++++-..
T Consensus 6 VvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 6 VLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 888999999999999999999999998654
No 476
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=38.32 E-value=47 Score=25.56 Aligned_cols=44 Identities=11% Similarity=0.226 Sum_probs=33.3
Q ss_pred HHHHhhhC-CCCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCCC
Q 023801 118 PELWKGSG-GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 165 (277)
Q Consensus 118 ~Ei~~Q~~-~~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~~ 165 (277)
.|+.++.. ..++.||+..|.-+.+.|+..++-. ..||||-+...
T Consensus 57 ~~~~~~a~~~g~~ViIa~AG~aahLpgvvA~~t~----~PVIgVPv~~~ 101 (173)
T 4grd_A 57 FDYAEKARERGLRAIIAGAGGAAHLPGMLAAKTT----VPVLGVPVASK 101 (173)
T ss_dssp HHHHHHHTTTTCSEEEEEEESSCCHHHHHHHHCC----SCEEEEEECCT
T ss_pred HHHHHHHHhcCCeEEEEeccccccchhhheecCC----CCEEEEEcCCC
Confidence 35555543 3489999999999999999988753 57999976544
No 477
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=38.08 E-value=69 Score=25.64 Aligned_cols=68 Identities=9% Similarity=-0.042 Sum_probs=37.3
Q ss_pred cEEEeeCCchHHHHHHHHHHHCC--CeEEEEeCCCCCHHHHHH-HHHcCCEEEEeCC-CCChHHHHHHHHHHHHh
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQ--YRLIITMPASMSLERRII-LRAFGAELVLTDP-AKGMKGAVQKAEEILAK 93 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~G--l~~~vvvp~~~~~~~~~~-~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~ 93 (277)
..|||..+|--|+++|..-.+.| ..++++-. +..+.+. .+.+|.++..+.. -.+.++..+...+..++
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR---SEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES---CHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeEEEEecC---CHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 56888888888999988777765 44444322 2333333 2345666655432 12344444444444444
No 478
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=37.99 E-value=95 Score=25.57 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=30.4
Q ss_pred HHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeC
Q 023801 9 ISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 9 v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp 53 (277)
+....+.|. .+..++++.-.+|-.++|++++...+|.+.+.++.
T Consensus 113 ~~~L~~~g~-~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~n 156 (269)
T 3tum_A 113 LGAAHKHGF-EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCD 156 (269)
T ss_dssp HHHHHHTTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHhCC-CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeC
Confidence 344444443 33335678888899999999999999987665554
No 479
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=37.80 E-value=1.6e+02 Score=23.65 Aligned_cols=38 Identities=24% Similarity=0.338 Sum_probs=25.1
Q ss_pred HHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcCC--CcEEEEE
Q 023801 118 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGI 160 (277)
Q Consensus 118 ~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~~--~~~vigV 160 (277)
.+++ +. +.||+ ||. +.....|+..++++.+. ++.|+|.
T Consensus 187 ~~~l-~~-~~~~a-i~~--~d~~a~g~~~al~~~g~~~di~vvg~ 226 (304)
T 3o1i_D 187 QRVI-DM-GNIDY-IVG--SAVAIEAAISELRSADKTHDIGLVSV 226 (304)
T ss_dssp HHHH-HH-SCCSE-EEE--CHHHHHHHHHHHTTTTCGGGSEEBCS
T ss_pred HHHH-cC-CCCCE-EEe--cCcchHHHHHHHHhcCCCCCeEEEEe
Confidence 3444 33 56888 654 56777888888888764 5666654
No 480
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=37.76 E-value=61 Score=29.05 Aligned_cols=66 Identities=23% Similarity=0.367 Sum_probs=37.2
Q ss_pred eEecCCCCCCcchhhhhhchHHHHHhhhC-------CC---CCEE--EEecCCchhHHHHHHH----HhhcCCCcEEE--
Q 023801 97 AYMLQQFENPANPKIHYETTGPELWKGSG-------GR---IDAL--VSGIGTGGTITGAGKF----LKEKNPNIKLY-- 158 (277)
Q Consensus 97 ~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~-------~~---~d~i--v~pvG~Gg~~aGi~~~----~~~~~~~~~vi-- 158 (277)
.++..+.+...||..||.+.|.|+.++.- +. ++.+ +.+.| |||=+|+... +++.+|+..+.
T Consensus 89 ~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlg-GGTGSG~gs~lle~L~~ey~kk~~~~~ 167 (445)
T 3ryc_B 89 NFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLG-GGTGSGMGTLLISKIREEYPDRIMNTF 167 (445)
T ss_dssp GEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESS-SSHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecC-CCCCCcHHHHHHHHHHHHcCccccceE
Confidence 34455666666778899999998876541 12 3333 33444 4454566554 44456654443
Q ss_pred EEecC
Q 023801 159 GIEPT 163 (277)
Q Consensus 159 gV~~~ 163 (277)
+|-|.
T Consensus 168 sV~Ps 172 (445)
T 3ryc_B 168 SVMPS 172 (445)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 44443
No 481
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=37.76 E-value=1.6e+02 Score=23.60 Aligned_cols=85 Identities=13% Similarity=0.122 Sum_probs=49.5
Q ss_pred eEEEEeCCCCC--HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhh
Q 023801 47 RLIITMPASMS--LERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGS 124 (277)
Q Consensus 47 ~~~vvvp~~~~--~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~ 124 (277)
+.++|.-...- ..-.+.+...|++|+.++. +.+...+...++.+.. ......+.| ... ......+..++.+++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r--~~~~~~~~~~~~~~~~-~~~~~~~~D-v~~-~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAAR--TVERLEDVAKQVTDTG-RRALSVGTD-ITD-DAQVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTT-CCEEEEECC-TTC-HHHHHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC--CHHHHHHHHHHHHhcC-CcEEEEEcC-CCC-HHHHHHHHHHHHHHc
Confidence 55555544332 3445666778999999985 3333334444444433 223222222 222 344566677888877
Q ss_pred CCCCCEEEEecCC
Q 023801 125 GGRIDALVSGIGT 137 (277)
Q Consensus 125 ~~~~d~iv~pvG~ 137 (277)
+.+|.+|..+|.
T Consensus 87 -g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 -GRVDVVINNAFR 98 (264)
T ss_dssp -SCCSEEEECCCS
T ss_pred -CCCcEEEECCCC
Confidence 689999998876
No 482
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=37.71 E-value=1e+02 Score=26.16 Aligned_cols=51 Identities=12% Similarity=0.107 Sum_probs=30.9
Q ss_pred EEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHH--HHHHHHHcCCEEEEeCC
Q 023801 25 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLE--RRIILRAFGAELVLTDP 76 (277)
Q Consensus 25 vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~--~~~~~~~~Ga~v~~~~~ 76 (277)
++..++|..+..++..+- +.=.-.|+++...... -...++..|++++.++.
T Consensus 65 ~~~~~s~t~al~~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (416)
T 3isl_A 65 YPIDGTSRAGIEAVLASV-IEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLEC 117 (416)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEecCcHHHHHHHHHHHh-cCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEec
Confidence 447777777777776654 3222234444333232 44567889999998874
No 483
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=37.55 E-value=1.7e+02 Score=24.05 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=24.5
Q ss_pred CCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 127 RIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 127 ~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 239 ~~~ai~~~--~d~~A~g~~~al~~~G~~vP~disvig~D 275 (332)
T 2o20_A 239 GATSAVVS--HDTVAVGLLSAMMDKGVKVPEDFEIISGA 275 (332)
T ss_dssp TCCEEEES--CHHHHHHHHHHHHHTTCCTTTTCEEEESS
T ss_pred CCCEEEEC--ChHHHHHHHHHHHHcCCCCccCEEEEEeC
Confidence 68999984 55677899999988763 45677664
No 484
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=37.50 E-value=42 Score=25.78 Aligned_cols=38 Identities=13% Similarity=-0.021 Sum_probs=30.2
Q ss_pred CCCCCCCcEEEeeCCchHH--HHHHHHHHHCCCeEEEEeC
Q 023801 16 GLITPGESVLIEPTSGNTG--IGLAFMAAAKQYRLIITMP 53 (277)
Q Consensus 16 g~l~~g~~~vv~aSsGN~g--~a~A~aa~~~Gl~~~vvvp 53 (277)
..++|+...++.+.||+.. ..+|..++..|++++.+.+
T Consensus 73 ~~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 73 KTLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 3678886667777677655 7788889999999999998
No 485
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=37.47 E-value=98 Score=26.81 Aligned_cols=50 Identities=20% Similarity=0.149 Sum_probs=37.2
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCH----------HHHHHHHHcCCEEE
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL----------ERRIILRAFGAELV 72 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~----------~~~~~~~~~Ga~v~ 72 (277)
+.++.-.+|+.|.-+|...+++|.+++++.+..... .-.+.++..|.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~ 203 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVE 203 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEE
Confidence 458888999999999999999999999987664321 11344556676665
No 486
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=37.42 E-value=71 Score=26.80 Aligned_cols=52 Identities=15% Similarity=0.066 Sum_probs=33.9
Q ss_pred cEEEeeCCchHHHHHHHHHHH-----CCCeEEEEeCCCCCHHHHHHH---HHcCCEEEEeCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAA-----KQYRLIITMPASMSLERRIIL---RAFGAELVLTDP 76 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~-----~Gl~~~vvvp~~~~~~~~~~~---~~~Ga~v~~~~~ 76 (277)
..++..++|..+..++..+-. -| -.|+++..........+ +..|++++.++.
T Consensus 61 ~~v~~~~g~t~a~~~~~~~l~~~~~~~g--d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 120 (382)
T 4eb5_A 61 GTVVFTSGATEANNLAIIGYAMRNARKG--KHILVSAVEHMSVINPAKFLQKQGFEVEYIPV 120 (382)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHGGGC--CEEEEETTCCHHHHHHHHHHTTTTCEEEEECB
T ss_pred CeEEEcCchHHHHHHHHHHHHhhccCCC--CEEEECCCcchHHHHHHHHHHhCCcEEEEecc
Confidence 357888888888887777653 34 24555555444443333 347999999874
No 487
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=37.36 E-value=92 Score=25.23 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=42.8
Q ss_pred CCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCC-HHHHHHHHHcCCEEE--EeCCCCChHHHHHHHHHHHHh
Q 023801 21 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELV--LTDPAKGMKGAVQKAEEILAK 93 (277)
Q Consensus 21 g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~-~~~~~~~~~~Ga~v~--~~~~~~~~~~~~~~a~~~~~~ 93 (277)
+...|||..+|--|+++|..-.+.|.+++++-..... ......++..|.++. .+|- .+.++..+...+..++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-NDATAVDALVESTLKE 102 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-CCHHHHHHHHHHHHHH
Confidence 3367888888999999999999999987776543211 122334455565544 4443 2334444444444444
No 488
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=37.32 E-value=55 Score=27.67 Aligned_cols=53 Identities=13% Similarity=0.214 Sum_probs=36.3
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..++..+-..+-.-.|+++..........++..|++++.++.
T Consensus 53 ~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~ 105 (373)
T 3frk_A 53 YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAVSYTGAKPIFVEP 105 (373)
T ss_dssp EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHHHHHSCEEEEECE
T ss_pred eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec
Confidence 47777888887776665542332235666666666677778889999998874
No 489
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=37.29 E-value=1.8e+02 Score=24.16 Aligned_cols=147 Identities=10% Similarity=0.034 Sum_probs=80.8
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCC--------------CCHH-----HHHHH-
Q 023801 5 GYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS--------------MSLE-----RRIIL- 64 (277)
Q Consensus 5 a~~~v~~a~~~g~l~~g~~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~--------------~~~~-----~~~~~- 64 (277)
+...+.++++++.+ ..|+-..+.+...+++-.+...+++.+...... .+.. -.+.+
T Consensus 69 ~~~~~~~l~~~~~v----~~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~ 144 (366)
T 3td9_A 69 AANAAARAIDKEKV----LAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAY 144 (366)
T ss_dssp HHHHHHHHHHTSCC----SEEEECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCe----EEEEccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 44556667766532 456766677778888889999999987653210 1111 12333
Q ss_pred HHcCC-EEEEe-CCCCChHH-HHHHHHHHHHhCCCeEecCCCCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH
Q 023801 65 RAFGA-ELVLT-DPAKGMKG-AVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 141 (277)
Q Consensus 65 ~~~Ga-~v~~~-~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~ 141 (277)
+.+|. +|.++ +...++.. ..+...+..++.+.......+.. . ..-+.....+|.+ ..||+||++ +++...
T Consensus 145 ~~~g~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~-~--~~d~~~~~~~l~~---~~~d~v~~~-~~~~~a 217 (366)
T 3td9_A 145 KNLGAKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFRS-G--DQDFSAQLSVAMS---FNPDAIYIT-GYYPEI 217 (366)
T ss_dssp HTSCCCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEECT-T--CCCCHHHHHHHHH---TCCSEEEEC-SCHHHH
T ss_pred HhcCCcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEeCC-C--CccHHHHHHHHHh---cCCCEEEEc-cchhHH
Confidence 44574 55555 22223332 22333444455533221111111 0 0112223333332 469999885 567788
Q ss_pred HHHHHHHhhcCCCcEEEEEec
Q 023801 142 TGAGKFLKEKNPNIKLYGIEP 162 (277)
Q Consensus 142 aGi~~~~~~~~~~~~vigV~~ 162 (277)
.++.+.+++.+.++++++...
T Consensus 218 ~~~~~~~~~~g~~~~~~~~~~ 238 (366)
T 3td9_A 218 ALISRQARQLGFTGYILAGDG 238 (366)
T ss_dssp HHHHHHHHHTTCCSEEEECGG
T ss_pred HHHHHHHHHcCCCceEEeeCC
Confidence 899999999888888887654
No 490
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=37.27 E-value=1.3e+02 Score=25.38 Aligned_cols=52 Identities=8% Similarity=-0.214 Sum_probs=37.8
Q ss_pred EEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..++..+- .+-.-.|+++..........++..|++++.++.
T Consensus 105 ~v~~~~ggt~a~~~~~~~~-~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~ 156 (398)
T 3a2b_A 105 AAILFSTGFQSNLGPLSCL-MGRNDYILLDERDHASIIDGSRLSFSKVIKYGH 156 (398)
T ss_dssp EEEEESSHHHHHHHHHHHS-SCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT
T ss_pred cEEEECCHHHHHHHHHHHH-hCCCCEEEECCccCHHHHHHHHHcCCceEEeCC
Confidence 5788888888877766653 232335666666677777888899999999985
No 491
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=37.21 E-value=1.9e+02 Score=24.50 Aligned_cols=117 Identities=11% Similarity=0.151 Sum_probs=67.2
Q ss_pred cEEEeeCCchHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023801 23 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 102 (277)
Q Consensus 23 ~~vv~aSsGN~g~a~A~aa~~~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 102 (277)
++|..-.-|+-|+++|..++.+|++++++-+...... .+ .... . +.+ ..++.++- +...++-
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~-~~~~--~----~~~----l~ell~~a-DvV~l~l 202 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERA------GF-DQVY--Q----LPA----LNKMLAQA-DVIVSVL 202 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCT------TC-SEEE--C----GGG----HHHHHHTC-SEEEECC
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhh------hh-hccc--c----cCC----HHHHHhhC-CEEEEeC
Confidence 4688889999999999999999999888754431110 01 1111 1 111 12344443 5554433
Q ss_pred CCCCcchhhhhhchHHHHHhhhCCCCCEEEEecCCchhH--HHHHHHHhhcCCCcEEEEEecCCC
Q 023801 103 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEPTES 165 (277)
Q Consensus 103 ~~~~~~~~~g~~t~~~Ei~~Q~~~~~d~iv~pvG~Gg~~--aGi~~~~~~~~~~~~vigV~~~~~ 165 (277)
-.++.+ +..+..+.++++ +++.+++-+|.|+.. ..++.++++. ...-.+.+....
T Consensus 203 Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g--~i~ga~lDV~~~ 259 (324)
T 3hg7_A 203 PATRET----HHLFTASRFEHC--KPGAILFNVGRGNAINEGDLLTALRTG--KLGMAVLDVFEQ 259 (324)
T ss_dssp CCCSSS----TTSBCTTTTTCS--CTTCEEEECSCGGGBCHHHHHHHHHTT--SSSEEEESCCSS
T ss_pred CCCHHH----HHHhHHHHHhcC--CCCcEEEECCCchhhCHHHHHHHHHcC--CceEEEeccCCC
Confidence 223322 122334556666 578999999999976 3455566542 234455554443
No 492
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=37.21 E-value=1.4e+02 Score=22.81 Aligned_cols=44 Identities=11% Similarity=0.238 Sum_probs=33.2
Q ss_pred HHHHhhhCC-CCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCCC
Q 023801 118 PELWKGSGG-RIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 165 (277)
Q Consensus 118 ~Ei~~Q~~~-~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~~ 165 (277)
.|+.++... ..+.||+..|.-+.+.|+..++- ...||||.+...
T Consensus 50 ~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~ 94 (166)
T 3oow_A 50 FDYAETAKERGLKVIIAGAGGAAHLPGMVAAKT----TLPVLGVPVKSS 94 (166)
T ss_dssp HHHHHHTTTTTCCEEEEEECSSCCHHHHHHHTC----SSCEEEEECCCT
T ss_pred HHHHHHHHhCCCcEEEEECCcchhhHHHHHhcc----CCCEEEeecCcC
Confidence 455555532 37999999999999999988864 358999987554
No 493
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=37.21 E-value=36 Score=28.04 Aligned_cols=28 Identities=7% Similarity=0.140 Sum_probs=25.6
Q ss_pred EEeeCCchHHHHHHHHHHHCCCeEEEEe
Q 023801 25 LIEPTSGNTGIGLAFMAAAKQYRLIITM 52 (277)
Q Consensus 25 vv~aSsGN~g~a~A~aa~~~Gl~~~vvv 52 (277)
|+.-.+|-.|.+.|.++++.|+++++|=
T Consensus 9 VvIIGaGpAGlsAA~~lar~g~~v~lie 36 (304)
T 4fk1_A 9 CAVIGAGPAGLNASLVLGRARKQIALFD 36 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 7888999999999999999999998883
No 494
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=37.17 E-value=1.5e+02 Score=23.38 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=24.9
Q ss_pred CCCCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 126 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 126 ~~~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
+.||+|||. +...+.|+..++++.+. ++.|+|.+
T Consensus 176 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 213 (277)
T 3e61_A 176 LSIDSIICS--NDLLAINVLGIVQRYHFKVPAEIQIIGYD 213 (277)
T ss_dssp HTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CCCCEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEeeC
Confidence 468999886 55677799999988763 45666664
No 495
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=36.77 E-value=67 Score=27.23 Aligned_cols=51 Identities=10% Similarity=-0.037 Sum_probs=31.6
Q ss_pred EEEeeCCchHHHHHHHHHHH-CCCeEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~-~Gl~~~vvvp~~~~~~~~~~~~~~Ga~v~~~~~ 76 (277)
.|+..++|..+..++..+-. -|=++++.-|... .-...++.+|++++.++.
T Consensus 93 ~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~--~~~~~~~~~g~~~~~v~~ 144 (386)
T 1u08_A 93 DITVTAGATEALYAAITALVRNGDEVICFDPSYD--SYAPAIALSGGIVKRMAL 144 (386)
T ss_dssp TEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCT--THHHHHHHTTCEEEEEEC
T ss_pred CEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCch--hHHHHHHHcCCEEEEeec
Confidence 47778888888877766642 2433333333333 344567788999988764
No 496
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=36.68 E-value=1.4e+02 Score=22.81 Aligned_cols=35 Identities=9% Similarity=0.132 Sum_probs=28.7
Q ss_pred CCCEEEEecCCchhHHHHHHHHhhcCCCcEEEEEecCCC
Q 023801 127 RIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 165 (277)
Q Consensus 127 ~~d~iv~pvG~Gg~~aGi~~~~~~~~~~~~vigV~~~~~ 165 (277)
..+.||+..|.-+.+.|+..++- ...||||.+...
T Consensus 61 g~~ViIa~AG~aa~LpgvvA~~t----~~PVIgVP~~~~ 95 (169)
T 3trh_A 61 GCAVFIAAAGLAAHLAGTIAAHT----LKPVIGVPMAGG 95 (169)
T ss_dssp TEEEEEEEECSSCCHHHHHHHTC----SSCEEEEECCCS
T ss_pred CCcEEEEECChhhhhHHHHHhcC----CCCEEEeecCCC
Confidence 46899999999999999988864 358999987654
No 497
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=36.65 E-value=1.8e+02 Score=23.89 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=30.9
Q ss_pred HHHHHhhhCCCCCEEEEecCCchhHHHHHHHHhhcC--CCcEEEEEecC
Q 023801 117 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN--PNIKLYGIEPT 163 (277)
Q Consensus 117 ~~Ei~~Q~~~~~d~iv~pvG~Gg~~aGi~~~~~~~~--~~~~vigV~~~ 163 (277)
..+++++- +.||+|||. +.....|+..++++.+ .++.|+|++-.
T Consensus 179 ~~~ll~~~-~~~~aI~~~--nd~~A~g~~~al~~~Gip~dv~vig~D~~ 224 (325)
T 2x7x_A 179 MDSMLRRH-PKIDAVYAH--NDRIAPGAYQAAKMAGREKEMIFVGIDAL 224 (325)
T ss_dssp HHHHHHHC-SCCCEEEES--STTHHHHHHHHHHHTTCTTSSEEEEEECC
T ss_pred HHHHHHhC-CCCCEEEEC--CCchHHHHHHHHHHcCCCCCeEEEEECCC
Confidence 34454443 569999975 4557789999998876 35788888754
No 498
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=36.60 E-value=1.2e+02 Score=22.23 Aligned_cols=51 Identities=8% Similarity=0.031 Sum_probs=22.9
Q ss_pred CCeEEEE-eCCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEec
Q 023801 45 QYRLIIT-MPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML 100 (277)
Q Consensus 45 Gl~~~vv-vp~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 100 (277)
.++.+++ +|...-+.-++.+...|..-+++... .+ .+...+.+++. +..++
T Consensus 70 ~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~~-~~---~~~l~~~a~~~-Gi~~i 121 (145)
T 2duw_A 70 KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLG-VI---NEQAAVLAREA-GLSVV 121 (145)
T ss_dssp CCSEEECCSCSTHHHHHHHHHHHHTCCEEECCTT-CC---CHHHHHHHHTT-TCEEE
T ss_pred CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC-hH---HHHHHHHHHHc-CCEEE
Confidence 3444433 35433334444444566665555432 22 23334444555 45555
No 499
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=36.48 E-value=41 Score=28.77 Aligned_cols=53 Identities=11% Similarity=0.039 Sum_probs=33.3
Q ss_pred EEEeeCCchHHHHHHHHHHH---CCCeEEEEeCCCCCHH----HHHHHHHcCCEEEEeCC
Q 023801 24 VLIEPTSGNTGIGLAFMAAA---KQYRLIITMPASMSLE----RRIILRAFGAELVLTDP 76 (277)
Q Consensus 24 ~vv~aSsGN~g~a~A~aa~~---~Gl~~~vvvp~~~~~~----~~~~~~~~Ga~v~~~~~ 76 (277)
.++..++|..+..++..+-. ..-.-.|+++...... -....+..|++++.++.
T Consensus 92 ~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 151 (420)
T 1t3i_A 92 EIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL 151 (420)
T ss_dssp GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB
T ss_pred eEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEecc
Confidence 47778888888888777652 3222344455443333 23455678999999874
No 500
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=36.47 E-value=1.6e+02 Score=23.43 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=23.5
Q ss_pred CCEEEEecCCchhHHHHHHHHhhcCC----CcEEEEEe
Q 023801 128 IDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 161 (277)
Q Consensus 128 ~d~iv~pvG~Gg~~aGi~~~~~~~~~----~~~vigV~ 161 (277)
||+|||. +..++.|+..++++.+. ++.|+|.+
T Consensus 202 ~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 237 (298)
T 3tb6_A 202 PTAILCY--NDEIALKVIDMLREMDLKVPEDMSIVGYD 237 (298)
T ss_dssp CSEEECS--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CeEEEEe--CcHHHHHHHHHHHHcCCCCCCceEEEecC
Confidence 8999876 56677799999988763 45666654
Done!