Query 023802
Match_columns 277
No_of_seqs 112 out of 147
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 13:02:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023802.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023802hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1j1ja_ a.118.16.1 (A:) Transl 67.3 14 0.001 29.5 8.9 38 124-161 32-81 (217)
2 d1gs9a_ a.24.1.1 (A:) Apolipop 56.5 5.3 0.00039 29.9 4.0 56 99-154 3-63 (144)
3 d1sumb_ a.7.12.1 (B:) PhoU hom 49.5 48 0.0035 25.3 9.0 66 103-175 6-71 (225)
4 d1xuva_ d.129.3.5 (A:) Hypothe 45.5 7.8 0.00057 28.2 3.3 23 97-119 140-162 (163)
5 d1qsda_ a.7.5.1 (A:) Tubulin c 37.5 44 0.0032 24.5 6.6 53 103-157 22-78 (102)
6 d1gg2g_ a.137.3.1 (G:) Transdu 35.6 13 0.00094 24.8 2.9 39 134-176 5-43 (54)
7 d1qc7a_ a.118.14.1 (A:) FliG { 35.1 28 0.002 24.8 5.0 45 121-165 41-89 (101)
8 d1pq4a_ c.92.2.2 (A:) Periplas 31.7 32 0.0024 27.7 5.4 51 99-149 139-189 (289)
9 d1tbge_ a.137.3.1 (E:) Transdu 27.6 16 0.0012 25.5 2.4 44 132-179 13-56 (68)
10 d1seta1 a.2.7.1 (A:1-110) Sery 25.0 16 0.0012 26.0 2.0 21 141-161 40-60 (110)
11 d1cqxa1 a.1.1.2 (A:1-150) Flav 24.9 30 0.0022 25.2 3.6 32 94-128 115-146 (150)
12 d1xvla1 c.92.2.2 (A:49-327) Mn 24.1 64 0.0047 25.6 5.8 90 97-186 110-212 (279)
13 d2e74g1 f.23.26.1 (G:9-35) Pet 23.3 54 0.004 19.2 3.8 24 228-252 2-25 (27)
14 d1nzna_ a.118.8.1 (A:) Mitocho 22.1 1.2E+02 0.0086 21.0 7.9 79 96-175 10-103 (122)
15 d1t72a_ a.7.12.1 (A:) Phosphat 21.7 1.5E+02 0.011 22.0 7.7 65 104-175 12-76 (215)
16 d1wa8a1 a.25.3.1 (A:1-99) ESAT 21.6 1.1E+02 0.0079 20.4 6.4 30 137-166 53-82 (99)
17 d3ehbb2 f.17.2.1 (B:1-107) Bac 21.1 57 0.0042 23.2 4.5 28 193-220 30-57 (107)
No 1
>d1j1ja_ a.118.16.1 (A:) Translin {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.31 E-value=14 Score=29.46 Aligned_cols=38 Identities=11% Similarity=0.170 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHH------------HHHHHHHHHHHHhhHHHHHHHHhhh
Q 023802 124 EIYSKRATAILKE------------TAEQLKIEAEKARKDLTVVAKELSE 161 (277)
Q Consensus 124 ~vys~ka~~vL~e------------tse~L~iqa~ka~~~L~~~ake~~e 161 (277)
..+|||+.-.|.. ..++.+...+++++.+..+++++..
T Consensus 32 ~~~sk~~I~~Lhr~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~l~~~~~~ 81 (217)
T d1j1ja_ 32 EQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTVKTHLTSLKTKFPA 81 (217)
T ss_dssp HHHHHHHHHHHGGGGSSSSSTTHHHHHHHHHHHHHHHHHHHHHHHHTSCG
T ss_pred HHHHHHHHHHHHHhhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 5678888877753 3455566666666677777777644
No 2
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=56.48 E-value=5.3 Score=29.93 Aligned_cols=56 Identities=23% Similarity=0.361 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 023802 99 EAWKQTLAAFREQAIKMQSVSQEAYE-----IYSKRATAILKETAEQLKIEAEKARKDLTV 154 (277)
Q Consensus 99 E~Wkq~L~~fkeqa~kmq~~s~eaY~-----vys~ka~~vL~etse~L~iqa~ka~~~L~~ 154 (277)
.-|.++.+.|..-+.+++....++=+ .++++-...+.++.+++..+++..+..|.-
T Consensus 3 ~~~e~~~d~f~~y~~~l~~~a~~~~~~l~~sel~~el~~~l~e~~~~l~~~~~~l~~~l~p 63 (144)
T d1gs9a_ 3 QRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTP 63 (144)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CcHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999888888887777654 455666666777777777766666554443
No 3
>d1sumb_ a.7.12.1 (B:) PhoU homolog TM1734 {Thermotoga maritima [TaxId: 2336]}
Probab=49.47 E-value=48 Score=25.34 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhHhHHhhcCc
Q 023802 103 QTLAAFREQAIKMQSVSQEAYEIYSKRATAILKETAEQLKIEAEKARKDLTVVAKELSEDGKKYLTEATENNP 175 (277)
Q Consensus 103 q~L~~fkeqa~kmq~~s~eaY~vys~ka~~vL~etse~L~iqa~ka~~~L~~~ake~~e~gkeyl~~aaensp 175 (277)
+-|+++|.+..+|-.+..+.++ .|+..|.+--+++-.+.-+....+...-.+|.+ .++...+..+|
T Consensus 6 ~~l~~l~~~i~~M~~~v~~~l~----~a~~al~~~D~~~a~~V~~~d~~Id~l~~~I~~---~~~~~la~~~p 71 (225)
T d1sumb_ 6 EKVEEFKKGVLKAGWFIEKMFR----NSISSLVERNESLAREVIADEEVVDQMEVEIQE---KAMEVLGLFSP 71 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhCCHHHHHHHHHhHHHHHHHHHHHHH---HHHHHHhccCC
Confidence 4588999999999998888875 566666655555555555555556666666644 23444556667
No 4
>d1xuva_ d.129.3.5 (A:) Hypothetical protein MM0500 {Methanosarcina mazei [TaxId: 2209]}
Probab=45.54 E-value=7.8 Score=28.16 Aligned_cols=23 Identities=22% Similarity=0.263 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q 023802 97 SEEAWKQTLAAFREQAIKMQSVS 119 (277)
Q Consensus 97 s~E~Wkq~L~~fkeqa~kmq~~s 119 (277)
.++-|+++|+++|+-+.||+.++
T Consensus 140 ~~~GW~~~L~~L~~~le~~~~~~ 162 (163)
T d1xuva_ 140 MEEGINDSYERLDELLEKMKKLE 162 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccc
Confidence 36779999999999999998764
No 5
>d1qsda_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Baker's yeast (Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]}
Probab=37.54 E-value=44 Score=24.54 Aligned_cols=53 Identities=23% Similarity=0.364 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhhHHHHHHH
Q 023802 103 QTLAAFREQAIKMQS-VSQEAYEIYSKRATAILKETAE---QLKIEAEKARKDLTVVAK 157 (277)
Q Consensus 103 q~L~~fkeqa~kmq~-~s~eaY~vys~ka~~vL~etse---~L~iqa~ka~~~L~~~ak 157 (277)
+=+++-.+.+.+|.. -...-|++ ||..+||.||.- ..+....+|-.||...-.
T Consensus 22 kE~~~q~~kv~k~kad~~~dey~i--Kkq~evL~Es~~mipd~~~RL~~a~~~L~~~l~ 78 (102)
T d1qsda_ 22 QELKDQEAHVAKLKEDKSVDPYDL--KKQEEVLDDTKRLLPTLYEKIREFKEDLEQFLK 78 (102)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHH--HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 334444555555552 23345665 889999999864 456666777777766553
No 6
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=35.55 E-value=13 Score=24.78 Aligned_cols=39 Identities=28% Similarity=0.418 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhHhHHhhcCch
Q 023802 134 LKETAEQLKIEAEKARKDLTVVAKELSEDGKKYLTEATENNPE 176 (277)
Q Consensus 134 L~etse~L~iqa~ka~~~L~~~ake~~e~gkeyl~~aaensp~ 176 (277)
++.+.||||.+++--|.-.+..|+++ +.|...-+++.|=
T Consensus 5 ~rk~VeqLr~e~~~~RikvS~aa~~l----~~y~e~~~~~Dpl 43 (54)
T d1gg2g_ 5 ARKLVEQLKMEANIDRIKVSKAAADL----MAYCEAHAKEDPL 43 (54)
T ss_dssp HHHHHHHHHHHHSSCCCCHHHHHHHH----HHHHHHHGGGCTT
T ss_pred HHHHHHHHHHHhCCchhhHHHHHHHH----HHHHHhcCcCCCC
Confidence 45688999999999999999998888 4588888888883
No 7
>d1qc7a_ a.118.14.1 (A:) FliG {Thermotoga maritima [TaxId: 2336]}
Probab=35.13 E-value=28 Score=24.85 Aligned_cols=45 Identities=29% Similarity=0.469 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHHHHhhHHHHHHHHhhhhhhh
Q 023802 121 EAYEIYSKRATAILKETAEQL----KIEAEKARKDLTVVAKELSEDGKK 165 (277)
Q Consensus 121 eaY~vys~ka~~vL~etse~L----~iqa~ka~~~L~~~ake~~e~gke 165 (277)
--+.--|+|+...|+|--+.+ ..+.+.||+++-.+++++.++|+=
T Consensus 41 ~il~nms~R~~~~l~ee~~~~g~v~~~dve~Aq~~Iv~~~r~l~~~G~I 89 (101)
T d1qc7a_ 41 KIFKNMSKRAAALLKDELEYMGPVRLKDVEEAQQKIINIIRRLEEAGEI 89 (101)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 345667899999999888766 478999999999999999999864
No 8
>d1pq4a_ c.92.2.2 (A:) Periplasmic zinc binding protein ZnuA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=31.70 E-value=32 Score=27.74 Aligned_cols=51 Identities=12% Similarity=0.101 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023802 99 EAWKQTLAAFREQAIKMQSVSQEAYEIYSKRATAILKETAEQLKIEAEKAR 149 (277)
Q Consensus 99 E~Wkq~L~~fkeqa~kmq~~s~eaY~vys~ka~~vL~etse~L~iqa~ka~ 149 (277)
..|+++.+.+.+.-.++..-..+.|+.+.++...=|.+..++++.+.++.+
T Consensus 139 ~n~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~l~~~~~~~l~~~~ 189 (289)
T d1pq4a_ 139 TLVKRQATTIAKELAELDPDNRDQYEANLAAFLAELERLNQELGQILQPLP 189 (289)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ccHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhHHHHHHHHHHHhcccc
Confidence 568999999999999999999999999999977777777777776666544
No 9
>d1tbge_ a.137.3.1 (E:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=27.56 E-value=16 Score=25.54 Aligned_cols=44 Identities=30% Similarity=0.403 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhHhHHhhcCchhhH
Q 023802 132 AILKETAEQLKIEAEKARKDLTVVAKELSEDGKKYLTEATENNPEVKE 179 (277)
Q Consensus 132 ~vL~etse~L~iqa~ka~~~L~~~ake~~e~gkeyl~~aaensp~vK~ 179 (277)
..|+.+.||||.++.--|.-.+..|+++ ++|...-+.+.|-|+-
T Consensus 13 ~~lk~~VeQLr~Ea~i~R~~VS~aa~dl----~~yce~~~~~DpLl~g 56 (68)
T d1tbge_ 13 DKLKMEVDQLKKEVTLERMLVSKCCEEF----RDYVEERSGEDPLVKG 56 (68)
T ss_dssp HHHHHHHHHHHHHHTCCCCCHHHHHHHH----HHHHHTTTTSCHHHHC
T ss_pred HHHHHHHHHHHHHhcCchhhHHHHHHHH----HHHHHhcCCCCCcccC
Confidence 4678899999999999999999999988 4588777777775443
No 10
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=25.03 E-value=16 Score=26.03 Aligned_cols=21 Identities=24% Similarity=0.338 Sum_probs=11.0
Q ss_pred HHHHHHHHhhHHHHHHHHhhh
Q 023802 141 LKIEAEKARKDLTVVAKELSE 161 (277)
Q Consensus 141 L~iqa~ka~~~L~~~ake~~e 161 (277)
++.+.|..+.+-..++++||.
T Consensus 40 l~~~~e~l~~~rN~~sk~i~k 60 (110)
T d1seta1 40 LKKRLQEVQTERNQVAKRVPK 60 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555543
No 11
>d1cqxa1 a.1.1.2 (A:1-150) Flavohemoglobin, N-terminal domain {Alcaligenes eutrophus [TaxId: 106590]}
Probab=24.88 E-value=30 Score=25.23 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=20.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 023802 94 AKESEEAWKQTLAAFREQAIKMQSVSQEAYEIYSK 128 (277)
Q Consensus 94 ~ees~E~Wkq~L~~fkeqa~kmq~~s~eaY~vys~ 128 (277)
..+.+++|+..++.+- .-|.+...+.|+.+++
T Consensus 115 t~e~~~AW~~~~~~i~---~~li~~e~~~~~~~~~ 146 (150)
T d1cqxa1 115 TDDIISAWAQAYGNLA---DVLMGMESELYERSAE 146 (150)
T ss_dssp CHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcc
Confidence 4467788888777665 4455666666665543
No 12
>d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=24.10 E-value=64 Score=25.56 Aligned_cols=90 Identities=13% Similarity=0.168 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------HHHHHHHHhhhhhhhh
Q 023802 97 SEEAWKQTLAAFREQAIKMQSVSQEAYEIYSKRATAILKETAEQLKIEAEKARK----------DLTVVAKELSEDGKKY 166 (277)
Q Consensus 97 s~E~Wkq~L~~fkeqa~kmq~~s~eaY~vys~ka~~vL~etse~L~iqa~ka~~----------~L~~~ake~~e~gkey 166 (277)
+=+.|+++.+.+.++..++---..+.|+...++-..-|++...+++.+.+++.. .+.=.++..|=+-.-.
T Consensus 110 dp~~~~~~a~~Ia~~L~~~dP~~~~~y~~n~~~~~~~l~~l~~~~~~~l~~~~~~~~~~v~~H~a~~Yf~~~~gl~~~~~ 189 (279)
T d1xvla1 110 SPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYM 189 (279)
T ss_dssp SHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEE
T ss_pred ChHHHHHHHHHHHHHHHHhChhhhhHHHHHHHHHhhhhhhhHHHHHHHHhhCCccccEEEEecccchhhhhhcCceeeee
Confidence 556788899999999999988999999999988887787777777766654311 2455666665433222
Q ss_pred HhHHhhcCc---hhhHHHhhcCC
Q 023802 167 LTEATENNP---EVKEIVETFTL 186 (277)
Q Consensus 167 l~~aaensp---~vK~i~et~~~ 186 (277)
+....|..| .++++.+.+..
T Consensus 190 ~~~~~~~~ps~~~l~~l~~~ik~ 212 (279)
T d1xvla1 190 WPINAEQQFTPKQVQTVIEEVKT 212 (279)
T ss_dssp ESSSSSCSCCHHHHHHHHHHHHT
T ss_pred cccCCcccCCHHHHHHHHHHHHh
Confidence 222234444 66666665544
No 13
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=23.33 E-value=54 Score=19.23 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC
Q 023802 228 RFGVILGGTLLALSIASLRSHKKGK 252 (277)
Q Consensus 228 ~aGl~fG~lLl~aGygSLk~~k~gk 252 (277)
+.|+++-.+ ..+-|.+||-+|+|.
T Consensus 2 vlgli~~tl-~glf~aayqqykrpn 25 (27)
T d2e74g1 2 VLGLVFATL-GGLFYAAYQQYKRPN 25 (27)
T ss_dssp HHHHHHHHH-HHHHHHHHHHTTSCC
T ss_pred eeeehHHHH-HHHHHHHHHHhcCCC
Confidence 345555433 334578899999875
No 14
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.15 E-value=1.2e+02 Score=20.99 Aligned_cols=79 Identities=23% Similarity=0.190 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH------------HHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHhh--
Q 023802 96 ESEEAWKQTLAAFREQAIKMQSVSQEAYEIYS------------KRATAILKETAEQL-KIEAEKARKDLTVVAKELS-- 160 (277)
Q Consensus 96 es~E~Wkq~L~~fkeqa~kmq~~s~eaY~vys------------~ka~~vL~etse~L-~iqa~ka~~~L~~~ake~~-- 160 (277)
-++|.|+++-+.|+ +|+++...+.+++--|. ++|..+|+++-+.- .-.--.+--.|+.+-...|
T Consensus 10 ~~~~~l~~Ae~~Y~-~aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~ 88 (122)
T d1nzna_ 10 VSVEDLLKFEKKFQ-SEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEY 88 (122)
T ss_dssp HHHHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cCHHHHHHHHHHHH-HHHhhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhh
Confidence 46788999988887 67788888888766544 35666666652210 0111123446888878887
Q ss_pred hhhhhhHhHHhhcCc
Q 023802 161 EDGKKYLTEATENNP 175 (277)
Q Consensus 161 e~gkeyl~~aaensp 175 (277)
++..+|+..+-+-.|
T Consensus 89 ~~A~~~~~~aL~~~P 103 (122)
T d1nzna_ 89 EKALKYVRGLLQTEP 103 (122)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCc
Confidence 467899999999999
No 15
>d1t72a_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Aquifex aeolicus [TaxId: 63363]}
Probab=21.66 E-value=1.5e+02 Score=21.98 Aligned_cols=65 Identities=25% Similarity=0.309 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhhhHhHHhhcCc
Q 023802 104 TLAAFREQAIKMQSVSQEAYEIYSKRATAILKETAEQLKIEAEKARKDLTVVAKELSEDGKKYLTEATENNP 175 (277)
Q Consensus 104 ~L~~fkeqa~kmq~~s~eaY~vys~ka~~vL~etse~L~iqa~ka~~~L~~~ake~~e~gkeyl~~aaensp 175 (277)
-|++.|.+..+|-....+.++ .++..|++--+++-.++-+....+.....+|-+.-- ...+.+.|
T Consensus 12 ~L~~l~~~l~~M~~~v~~~l~----~~~~al~~~D~~~a~~v~~~d~~id~l~~~I~~~~~---~~l~~~~p 76 (215)
T d1t72a_ 12 ELEETKEQVIKMAKLVQEAID----KATEALNKQNVELAEEVIKGDDTIDLLEVDIERRCI---RMIALYQP 76 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----HHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHH---HHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCHHHHHHHHHhHHHHHHHHHHHHHHHH---HHHhhcCc
Confidence 388899999999888877775 455555554444444444444455555555544222 23455566
No 16
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.63 E-value=1.1e+02 Score=20.39 Aligned_cols=30 Identities=17% Similarity=0.443 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhhhhhhhh
Q 023802 137 TAEQLKIEAEKARKDLTVVAKELSEDGKKY 166 (277)
Q Consensus 137 tse~L~iqa~ka~~~L~~~ake~~e~gkey 166 (277)
.-++.+..+.+..+.|..++..+..-+..|
T Consensus 53 ~~~~w~~~~~~l~~~L~~i~~~L~~aa~~y 82 (99)
T d1wa8a1 53 AVVRFQEAANKQKQELDEISTNIRQAGVQY 82 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344477777888888888888777766655
No 17
>d3ehbb2 f.17.2.1 (B:1-107) Bacterial aa3 type cytochrome c oxidase subunit II {Paracoccus denitrificans [TaxId: 266]}
Probab=21.08 E-value=57 Score=23.24 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=19.9
Q ss_pred cccccccceechhhHHHHHHhhHHHHHh
Q 023802 193 EFSTLRDFYLGIPYGLLLTLGGFISFMV 220 (277)
Q Consensus 193 ~~s~mHDFclgipYg~LVa~GGiiGY~k 220 (277)
+.-.+||+-+.+....++.+.|++-|+.
T Consensus 30 ~i~~lh~~v~~i~~~I~~~V~~~~~~~~ 57 (107)
T d3ehbb2 30 DQQWLDHFVLYIITAVTIFVCLLLLICI 57 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556788888887777777777766543
Done!