Your job contains 1 sequence.
>023803
MAASSKVIGPETHMLNEDWTIVLPRRGKQRRNLRRIRSPEEQQKPWFPTEIESDPHRVSK
LLQRIEMSIKKMESSEFYRTLLDQIQTPEVLNSFYNVLGSESNMQMVIYGIGCLESYGPP
RLQLSLAILMKRKFSWIGDIEVFDPILSSTEARVLEALGCSVLSVNEQGRRCAIKPTLFY
MPHCEAELYNNLLQANWGAMLKQMVLFGNSFEMYHQHVLEFKGSIVVDTARHILAARRFT
HEFGIKTVSDDYFAGFHDSSWLFFRPDLESELQPKEI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023803
(277 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2148333 - symbol:SRR1 "AT5G59560" species:3702... 763 1.0e-75 1
ZFIN|ZDB-GENE-060825-269 - symbol:srrd "SRR1 domain conta... 248 3.9e-21 1
MGI|MGI:1917368 - symbol:Srrd "SRR1 domain containing" sp... 242 1.7e-20 1
UNIPROTKB|Q9UH36 - symbol:SRRD "SRR1-like protein" specie... 210 6.7e-17 1
FB|FBgn0038582 - symbol:CG7988 species:7227 "Drosophila m... 158 1.5e-09 1
POMBASE|SPBC14C8.13 - symbol:SPBC14C8.13 "SRR1 family pro... 118 7.4e-05 1
>TAIR|locus:2148333 [details] [associations]
symbol:SRR1 "AT5G59560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0010017 "red or
far-red light signaling pathway" evidence=IMP] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] EMBL:AY127047
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GO:GO:0007623
GO:GO:0042752 EMBL:AB025604 GO:GO:0009585 eggNOG:NOG279172
InterPro:IPR012942 Pfam:PF07985 EMBL:AY084714 EMBL:AK118532
IPI:IPI00534448 RefSeq:NP_200764.1 RefSeq:NP_851224.1
UniGene:At.28233 STRING:Q8GWZ6 EnsemblPlants:AT5G59560.1
EnsemblPlants:AT5G59560.2 GeneID:836075 KEGG:ath:AT5G59560
TAIR:At5g59560 InParanoid:Q8GWZ6 OMA:CEASLYD PhylomeDB:Q8GWZ6
ProtClustDB:PLN03093 Genevestigator:Q8GWZ6 GermOnline:AT5G59560
Uniprot:Q8GWZ6
Length = 275
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 148/259 (57%), Positives = 194/259 (74%)
Query: 18 DWTIVLPRRGKQ--RRNLRRIRSPEEQQKPWFPTEIESDPHRVSKLLQRIEMSIKKMESS 75
+W +VLP +G+Q RR + EE+++PW ++E DP R ++L Q++E+S+KK+ESS
Sbjct: 13 EWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEISLKKIESS 72
Query: 76 EFYRTLLDQIQTPEVLNSFYNVLGSESNMQMVIYGIGCLESYGPPRLQLSLAILMKRKFS 135
FY L+Q+++PEV N VLGSE+ +QMV+YGIG +ESY PR QLS+AILMKR+F
Sbjct: 73 SFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIAILMKREFD 132
Query: 136 WIGD-IEVFDPILSSTEARVLEALGCSVLSVNEQGRRCAIKPTLFYMPHCEAELYNNLLQ 194
W+GD IEVFDP+LS+TE+ LE+LGCSVLSVNEQ RR A+KPTLF+MPHCEA LY+NLLQ
Sbjct: 133 WVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEANLYSNLLQ 192
Query: 195 ANWGA-MLKQMVLFGNSFEMYHQHVLEFKGSIVVDTARHILAARRFTHEFGIKTVSDDYF 253
ANW L ++ LFGNSF+MY + V F ++ T R I+AA+R T EF I+T SDDYF
Sbjct: 193 ANWRMDRLSKIALFGNSFQMYEEQV-SFDAEVICATKR-IIAAQRVTSEFAIETESDDYF 250
Query: 254 AGFHDSSWLFFRPDLESEL 272
A FHDSSW FF ++SEL
Sbjct: 251 AAFHDSSWHFFSSGIDSEL 269
>ZFIN|ZDB-GENE-060825-269 [details] [associations]
symbol:srrd "SRR1 domain containing" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] ZFIN:ZDB-GENE-060825-269
InterPro:IPR012942 Pfam:PF07985 CTD:402055 EMBL:BC122414
IPI:IPI00786537 RefSeq:NP_001038892.1 UniGene:Dr.82946
GeneID:751717 KEGG:dre:751717 HOVERGEN:HBG100667 InParanoid:Q0P3W1
NextBio:20917859 Uniprot:Q0P3W1
Length = 274
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 64/207 (30%), Positives = 109/207 (52%)
Query: 16 NEDWTIVLPRRGKQRRNLRRIRSPEEQQKPWFPTEIESDPHRVSKLLQRIEMSIKKMESS 75
NE W + R+G RR +++ +P+ ++ +SD ++ + Q+I ++ ++
Sbjct: 4 NEGWQVAGRRKGAARRG-KQVLNPK------LDSQQDSDC-KIDQ--QKIIHAMNELRGE 53
Query: 76 EFYRTLLDQIQTPEVLNSFYNVLGSESNMQMVIYGIGCLESYGPPRLQLSLAILMKRKFS 135
F+ D + +L+S S +Q V YG+G ES R QL++ +L+
Sbjct: 54 SFWMEWKDLLCV-RLLSSTSEQSEDASLLQCVCYGLGHFESCVSARFQLAMLLLLLETLQ 112
Query: 136 W-IGDIEVFDPILSSTEARVLEALGCSVLSVNEQGRRCAIKPTLFYMPHCEAELYNNLLQ 194
+ V+DP+ S +E L+ LG +VL+ NE+G+R +PTLFY+ HC LYNNLL
Sbjct: 113 IPMSSCCVYDPVFSPSECDALKELGFTVLTENEEGKRAVYQPTLFYLMHCGKALYNNLLW 172
Query: 195 ANWGAM-LKQMVLFGNSFEMYHQHVLE 220
NW L++M + GNSF + +L+
Sbjct: 173 RNWTPRTLQKMTIIGNSFNGIQERMLQ 199
>MGI|MGI:1917368 [details] [associations]
symbol:Srrd "SRR1 domain containing" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048511 "rhythmic process" evidence=IEA]
MGI:MGI:1917368 GO:GO:0048511 eggNOG:NOG279172
GeneTree:ENSGT00390000003948 InterPro:IPR012942 Pfam:PF07985
CTD:402055 HOGENOM:HOG000154422 HOVERGEN:HBG062240
OrthoDB:EOG48GW3S EMBL:AC123848 EMBL:BC030678 EMBL:BC125007
EMBL:AK012640 IPI:IPI00659252 IPI:IPI00659764 RefSeq:NP_081599.2
UniGene:Mm.172947 UniGene:Mm.486479 PhosphoSite:Q8K2M3 PRIDE:Q8K2M3
Ensembl:ENSMUST00000031289 GeneID:70118 KEGG:mmu:70118
UCSC:uc008ysz.2 InParanoid:Q8K2M3 ChiTaRS:SRRD NextBio:331024
Bgee:Q8K2M3 CleanEx:MM_SRRD Genevestigator:Q8K2M3
GermOnline:ENSMUSG00000029346 Uniprot:Q8K2M3
Length = 249
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 64/192 (33%), Positives = 101/192 (52%)
Query: 33 LRRIRSPEEQQK--PWFPTEIESDPHRVSKLLQRIEMSIKKMESSEFYRTLLDQIQTPEV 90
LRR+R EE + + + +E+ + K L++++ + + +L Q P
Sbjct: 43 LRRLREAEEDLRISDFCSSALETITECLRKQLEQLQPLTEALGRLHLGSSLPSASQEP-- 100
Query: 91 LNSFYNVLGSESNMQMVIYGIGCLESYGPPRLQLSLAILMKRKFSWI-GDIEVFDPILSS 149
+ S S+++ V YG+G S R+QL+ +L K V+DP+ S
Sbjct: 101 ------LASSASHVKCVCYGLGTFASCPTARIQLAFMLLFLEKCQVPRSHCWVYDPLFSQ 154
Query: 150 TEARVLEALGCSVLSVNEQGRRCAI-KPTLFYMPHCEAELYNNLLQANWGA-MLKQMVLF 207
TE VL +LG +VLS NE+G+R +PT+FYMPHC LYNNLL +NW A L ++++
Sbjct: 155 TEVSVLTSLGVTVLSENEEGKRSVQGQPTVFYMPHCGTALYNNLLWSNWSADALSRVLII 214
Query: 208 GNSFEMYHQHVL 219
GNSF + +L
Sbjct: 215 GNSFRGLEERLL 226
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 74/212 (34%), Positives = 105/212 (49%)
Query: 17 EDWTIVLPRRGKQRRNLRRIRSPEEQQKPWFPTEIESDPHRVSKLLQRIEMSIK------ 70
E W+ V PRR K+ RR R P E + E E+D V + L+ E ++
Sbjct: 7 EPWSAVAPRRRKRAAG-RRPR-PGEGPR----AEPEADGEAVLRRLREAEEDLRISDFCS 60
Query: 71 -KMES-SEFYRTLLDQIQT-PEVLNSFY-----------NVLGSESNMQMVIYGIGCLES 116
+E+ +E R L+Q+Q E L + + S S+++ V YG+G S
Sbjct: 61 SALETITECLRKQLEQLQPLTEALGRLHLGSSLPSASQEPLASSASHVKCVCYGLGTFAS 120
Query: 117 YGPPRLQLSLAILMKRKFSWI-GDIEVFDPILSSTEARVLEALGCSVLSVNEQGRRCAI- 174
R+QL+ +L K V+DP+ S TE VL +LG +VLS NE+G+R
Sbjct: 121 CPTARIQLAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSENEEGKRSVQG 180
Query: 175 KPTLFYMPHCEAELYNNLLQANWGAMLKQMVL 206
+PT+FYMPHC LYNNLL +NW A VL
Sbjct: 181 QPTVFYMPHCGTALYNNLLWSNWSADALSRVL 212
>UNIPROTKB|Q9UH36 [details] [associations]
symbol:SRRD "SRR1-like protein" species:9606 "Homo sapiens"
[GO:0048511 "rhythmic process" evidence=IEA] GO:GO:0048511
EMBL:Z99714 eggNOG:NOG279172 InterPro:IPR012942 Pfam:PF07985
EMBL:BC066962 IPI:IPI00295865 RefSeq:NP_001013716.2
UniGene:Hs.709914 ProteinModelPortal:Q9UH36 STRING:Q9UH36
PhosphoSite:Q9UH36 DMDM:31340433 PRIDE:Q9UH36
Ensembl:ENST00000215917 GeneID:402055 KEGG:hsa:402055
UCSC:uc010gve.3 CTD:402055 GeneCards:GC22P026879 HGNC:HGNC:33910
HPA:HPA002945 neXtProt:NX_Q9UH36 PharmGKB:PA162404806
HOGENOM:HOG000154422 HOVERGEN:HBG062240 InParanoid:Q9UH36
OMA:IGNFATC OrthoDB:EOG48GW3S PhylomeDB:Q9UH36 GenomeRNAi:402055
NextBio:107272 Bgee:Q9UH36 CleanEx:HS_SRRD Genevestigator:Q9UH36
GermOnline:ENSG00000100104 Uniprot:Q9UH36
Length = 339
Score = 210 (79.0 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 62/196 (31%), Positives = 102/196 (52%)
Query: 33 LRRIRSPEEQQ--KPWFPTEIESDPHRVSKLLQRIEMSIKKMESSEFYRTLLDQI--QTP 88
LRRI E+ ++ + +E+ ++K L++++ + + S F LD + ++
Sbjct: 63 LRRIWEAEKDLFISDFWSSALETINRCLTKHLEQLKAPVGTL-SDIFGNLHLDSLPEESD 121
Query: 89 EVLNSFYN--VLGSESNMQMVIYGIGCLESYGPPRLQLSLAILMKRKFSWI-GDIEVFDP 145
+S ++ +++ V YGIG + R QL+ +L+ K V+DP
Sbjct: 122 VATDSIPREILVTGTCHLKCVCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDP 181
Query: 146 ILSSTEARVLEALGCSVLSVNEQGRRCAI-KPTLFYMPHCEAELYNNLLQANWGA-MLKQ 203
+ S E VL LG +VLS NE+G+R +PT+FYM HC LYNNLL +NW L +
Sbjct: 182 LFSQLEIEVLNTLGVTVLSENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSK 241
Query: 204 MVLFGNSFEMYHQHVL 219
MV+ GNSF+ + +L
Sbjct: 242 MVIIGNSFKGLEERLL 257
>FB|FBgn0038582 [details] [associations]
symbol:CG7988 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0007623 "circadian rhythm"
evidence=ISS] EMBL:AE014297 GO:GO:0007623 EMBL:AY118957
RefSeq:NP_650691.1 UniGene:Dm.20211 PRIDE:Q9VEB5
EnsemblMetazoa:FBtr0083561 GeneID:42180 KEGG:dme:Dmel_CG7988
UCSC:CG7988-RA FlyBase:FBgn0038582 eggNOG:NOG279172
GeneTree:ENSGT00390000003948 InParanoid:Q9VEB5 OMA:NSFEMLT
OrthoDB:EOG46Q588 PhylomeDB:Q9VEB5 GenomeRNAi:42180 NextBio:827543
Bgee:Q9VEB5 GermOnline:CG7988 InterPro:IPR012942 Pfam:PF07985
Uniprot:Q9VEB5
Length = 276
Score = 158 (60.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 53/199 (26%), Positives = 91/199 (45%)
Query: 17 EDWTIVLPRRGKQRRNLRRIRSPEEQQKPWFPTEIESDPHRVSKLLQRIEMSIKKMESSE 76
ED+ +V ++ R+ LRR R + + + I+ V K R+E +M S+
Sbjct: 6 EDFQVVTRKKWMARKCLRR-RDRHKSESDYL---IDCPDVNVEKFQPRLENLCTEMCQSD 61
Query: 77 FYRTLLDQIQTPEVLNSFYNVLGSESNMQMVIYGIGCLESYGPPRLQLSLAILMKRKFSW 136
++ ++ +Q + L L ++V G+G Q + I + R
Sbjct: 62 YFLVAMEALQ--QQLEGIRKPLE-----RIVCLGLGPFSRTYHALHQAAFVIGLHRHHK- 113
Query: 137 IGDIEVFDPILSSTEARVLEAL-GCSVLSVNEQGRRCAIKPTLFYMPHCEAELYNNLLQA 195
I + FDP+ +E ++ GC ++S + G+ A PTL+Y+PHC L +N+L +
Sbjct: 114 IREALYFDPVFRDSEKELIRLFDGC-IMSKDCAGKHEATVPTLYYLPHCPYALMHNILWS 172
Query: 196 NWGA-MLKQMVLFGNSFEM 213
NW L + L NSFEM
Sbjct: 173 NWKRETLPNVFLISNSFEM 191
>POMBASE|SPBC14C8.13 [details] [associations]
symbol:SPBC14C8.13 "SRR1 family protein" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] PomBase:SPBC14C8.13 GO:GO:0005829 GO:GO:0005634
EMBL:CU329671 InterPro:IPR012942 Pfam:PF07985 PIR:T39441
RefSeq:NP_595916.1 EnsemblFungi:SPBC14C8.13.1 GeneID:2540090
KEGG:spo:SPBC14C8.13 eggNOG:KOG3131 OrthoDB:EOG418FXX
NextBio:20801227 Uniprot:O60093
Length = 251
Score = 118 (46.6 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 44/167 (26%), Positives = 77/167 (46%)
Query: 49 TEIESDPHRVSKLLQRIEMSIKKMESSEFYRTLLDQIQTPEVLNSFYNVLGSESNMQMVI 108
T+ ++D L ++++ S +K+E SEF +++ Q L+ F + + + +I
Sbjct: 27 TQGDTDLWSQDTLQRKLDNSREKLEYSEFLKSVQSQ------LSEFKDPIH-----KCII 75
Query: 109 YGIGCLESYGPPRLQLSLAILMKRKFSWIGDI-EVFDPILSSTEARVLEALGCSVLSVNE 167
G+G + + LQLSL + + F+ +DP + LE G VL +
Sbjct: 76 LGLGRIHTL-TASLQLSLFFEIMKIFNLQPRFCSFYDPAFLKDDVEFLENKGFCVLP-DP 133
Query: 168 QGRRCAIKPTLFYMPHCEAELYNNLLQANWGAMLKQMVLFGNSFEMY 214
C +K TL YMPHC LY L A + ++ GN+ ++Y
Sbjct: 134 PTPSC-LKYTLLYMPHCPTSLYETWLAAYVNDDPRHFIMCGNNLQLY 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 277 277 0.00080 115 3 11 22 0.46 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 614 (65 KB)
Total size of DFA: 215 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.00u 0.09s 25.09t Elapsed: 00:00:02
Total cpu time: 25.00u 0.09s 25.09t Elapsed: 00:00:02
Start: Tue May 21 00:49:49 2013 End: Tue May 21 00:49:51 2013