BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023808
(277 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 179 bits (454), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 142/226 (62%), Gaps = 3/226 (1%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+S H NL+ L G C+ T R+LVY Y+ N S+ L ++ L+W KR I +G
Sbjct: 89 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 148
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+GLA+LH+ P I+HRD+KA+NILLD+EF +GDFGLAKL H+ + GT G
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK--AMWGQMNKFLLEWAWQLHQEEK 180
++APEY+ G+ + K DV+ +GV++LE+I+G+ + + + LL+W L +E+K
Sbjct: 209 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 268
Query: 181 PLELVDPEL-GEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 225
LVD +L G Y E+ + ++VA CTQ++ RP+M++V++ML
Sbjct: 269 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 177 bits (449), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 142/229 (62%), Gaps = 3/229 (1%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+S H NL+ L G C+ T R+LVY Y+ N S+ L ++ L+W KR I +G
Sbjct: 81 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 140
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+GLA+LH+ P I+HRD+KA+NILLD+EF +GDFGLAKL H+ + G G
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK--AMWGQMNKFLLEWAWQLHQEEK 180
++APEY+ G+ + K DV+ +GV++LE+I+G+ + + + LL+W L +E+K
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260
Query: 181 PLELVDPEL-GEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKN 228
LVD +L G Y E+ + ++VA CTQ++ RP+M++V++ML +
Sbjct: 261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 174 bits (441), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 140/233 (60%), Gaps = 5/233 (2%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
LS RHP+LV LIG C + IL+Y+Y+EN +L R L G+ + ++WE+R +IC+G
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+GL +LH I+HRD+K+ NILLD+ F PKI DFG++K + + TH+ + GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKP 181
GY+ PEY + G+LT K+DVYSFGV++ E++ R++ + L EWA + H +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 182 LELVDPELGE-YPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNE 233
++VDP L + P + ++ A C ++ RP M V+ L +RL E
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 173 bits (438), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 139/233 (59%), Gaps = 5/233 (2%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
LS RHP+LV LIG C + IL+Y+Y+EN +L R L G+ + ++WE+R +IC+G
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+GL +LH I+HRD+K+ NILLD+ F PKI DFG++K + TH+ + GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKP 181
GY+ PEY + G+LT K+DVYSFGV++ E++ R++ + L EWA + H +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 182 LELVDPELGE-YPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNE 233
++VDP L + P + ++ A C ++ RP M V+ L +RL E
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 13/227 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG 61
++ +H NLVEL+G G LVY Y+ N SL DR L L+W R I G
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSWHMRCKIAQG 141
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPDNITHITTRIA 118
A G+ FLHE H +HRDIK++NILLD+ F KI DFGLA+ F + + +RI
Sbjct: 142 AANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV--MXSRIV 196
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQE 178
GTT Y+APE L G++T K+D+YSFGV++LEII+G + + L +E
Sbjct: 197 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLLDIKEEIEDEE 254
Query: 179 EKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 225
+ + +D ++ + + VA C ++RP + +V ++L
Sbjct: 255 KTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 13/227 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG 61
++ +H NLVEL+G G LVY Y+ N SL DR L L+W R I G
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSWHMRCKIAQG 141
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPDNITHITTRIA 118
A G+ FLHE H +HRDIK++NILLD+ F KI DFGLA+ F + + RI
Sbjct: 142 AANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV--MXXRIV 196
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQE 178
GTT Y+APE L G++T K+D+YSFGV++LEII+G + + L +E
Sbjct: 197 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLLDIKEEIEDEE 254
Query: 179 EKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 225
+ + +D ++ + + VA C ++RP + +V ++L
Sbjct: 255 KTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 13/227 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG 61
++ +H NLVEL+G G LVY Y+ N SL DR L L+W R I G
Sbjct: 78 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSWHMRCKIAQG 135
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPDNITHITTRIA 118
A G+ FLHE H +HRDIK++NILLD+ F KI DFGLA+ F + + RI
Sbjct: 136 AANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV--MXXRIV 190
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQE 178
GTT Y+APE L G++T K+D+YSFGV++LEII+G + + L +E
Sbjct: 191 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLLDIKEEIEDEE 248
Query: 179 EKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 225
+ + +D ++ + + VA C ++RP + +V ++L
Sbjct: 249 KTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGI 62
+ +H NLVEL+G G LVY Y N SL DR L L+W R I G
Sbjct: 76 AKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDR--LSCLDGTPPLSWHXRCKIAQGA 133
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI-TTRIAGTT 121
A G+ FLHE H +HRDIK++NILLD+ F KI DFGLA+ + +RI GTT
Sbjct: 134 ANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTT 190
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKP 181
Y APE L G++T K+D+YSFGV++LEII+G + + L +E+
Sbjct: 191 AYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLLDIKEEIEDEEKTI 248
Query: 182 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 225
+ +D + + + VA C ++RP + +V ++L
Sbjct: 249 EDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RHPN+V +G Q +V EY+ SL R LL + A +L+ +R + +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDV 146
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
AKG+ +LH P IVHRD+K+ N+L+D+++ K+ DFGL++L + AGT
Sbjct: 147 AKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL-XSKXAAGTPE 204
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
++APE + K+DVYSFGV++ E+ + + WG +N
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP----WGNLN 243
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 22/159 (13%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGA-TKANIKLNWEKRSDICVGIAK 64
++HPN++ L G C++ LV E+ L+RVL G +I +NW V IA+
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIAR 116
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP--------KIGDFGLAKLFPDNITHITTR 116
G+ +LH+E + I+HRD+K+SNIL+ Q+ KI DFGLA+ + H TT+
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-----HRTTK 171
Query: 117 I--AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ AG ++APE + + +DV+S+GVL+ E+++G
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RHPN+V +G Q +V EY+ SL R LL + A +L+ +R + +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDV 146
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR-IAGTT 121
AKG+ +LH P IVHR++K+ N+L+D+++ K+ DFGL++L T ++++ AGT
Sbjct: 147 AKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTP 203
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
++APE + K+DVYSFGV++ E+ + + WG +N
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP----WGNLN 243
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 31/234 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGAT-----KANIKLNWEKRSD 57
LS V HPN+V+L G C+ LV EY E SL VL GA A ++W
Sbjct: 56 LSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW----- 108
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTR 116
C+ ++G+A+LH ++HRD+K N+LL KI DFG A D TH+T
Sbjct: 109 -CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN 164
Query: 117 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLH 176
G+ ++APE G + K DV+S+G+++ E+I+ R + G + + W +H
Sbjct: 165 -KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVH 219
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
+ P L + P I M C S+RP M +++K++T +R
Sbjct: 220 NGTR------PPLIKNLPKPIESLMTR---CWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 31/234 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGAT-----KANIKLNWEKRSD 57
LS V HPN+V+L G C+ LV EY E SL VL GA A ++W
Sbjct: 55 LSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW----- 107
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTR 116
C+ ++G+A+LH ++HRD+K N+LL KI DFG A D TH+T
Sbjct: 108 -CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN 163
Query: 117 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLH 176
G+ ++APE G + K DV+S+G+++ E+I+ R + G + + W +H
Sbjct: 164 -KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVH 218
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
+ P L + P I M C S+RP M +++K++T +R
Sbjct: 219 NGTR------PPLIKNLPKPIESLMTR---CWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 68 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 125 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 181
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 70 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 126
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 127 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 183
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 71 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 127
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 128 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 184
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 118
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 119 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 72 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 128
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 129 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 185
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 68 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 125 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 181
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 64 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 120
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 121 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 177
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 63 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 119
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 120 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 176
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 67 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 124 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 180
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 118
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 119 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 118
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 119 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 175
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 57 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN
Sbjct: 114 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 170
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 118
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L D
Sbjct: 119 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK 175
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L Q I+ EY+EN SL L T + IKL K D+ I
Sbjct: 58 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQI 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ E + +HR+++A+NIL+ + KI DFGLA+L DN
Sbjct: 115 AEGMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 171
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 22/230 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ HPN++ L G + ++V EY+EN SLD L K + + + + GI
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGI 133
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-- 120
+ G+ +L + VHRD+ A NIL++ K+ DFGL+++ D+ T G
Sbjct: 134 SAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEK 180
+ APE + + T +DV+S+G+++ E++S + W N+ +++ + ++
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS--YGERPYWEMTNQDVIKAVEEGYRLPS 248
Query: 181 PLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P++ P + + M C Q + RP+ ++++ ML K IR
Sbjct: 249 PMDC---------PAALYQLM---LDCWQKERNSRPKFDEIVNMLDKLIR 286
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGLA++ D+ T G + +
Sbjct: 162 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 275
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 22/230 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ HPN+V L G +G ++V E++EN +LD L K + + + + GI
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL---RKHDGQFTVIQLVGMLRGI 154
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-- 120
A G+ +L + VHRD+ A NIL++ K+ DFGL+++ D+ + T G
Sbjct: 155 AAGMRYLADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEK 180
+ APE + + T +DV+S+G+++ E++S + W N+ +++ + ++
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS--YGERPYWDMSNQDVIKAIEEGYRLPA 269
Query: 181 PLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P++ P + + M C Q + RP+ Q++ +L K IR
Sbjct: 270 PMDC---------PAGLHQLM---LDCWQKERAERPKFEQIVGILDKMIR 307
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 22/176 (12%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL---------DRVLLGATKANIKLNWE 53
L+N++H ++V+ G CV+G I+V+EY+++ L D VL+ +L
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
+ I IA G+ +L + H VHRD+ N L+ + KIGDFG+++ D +
Sbjct: 129 QMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSR---DVYSTD 182
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
R+ G T ++ PE ++ + T ++DV+S GV++ EI + GK W Q++
Sbjct: 183 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT---YGKQPWYQLS 235
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 24/232 (10%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ HPN++ L G + T +++ E++EN SLD L + + + + + GI
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGI 144
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGT 120
A G+ +L + + VHRD+ A NIL++ K+ DFGL++ D+ + T+ + G
Sbjct: 145 AAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 201
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQE 178
+ APE + + T +DV+S+G+++ E++S + W N+ ++ Q ++
Sbjct: 202 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS--YGERPYWDMTNQDVINAIEQDYRL 259
Query: 179 EKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P++ P+ + + M C Q + RP+ Q++ L K IR
Sbjct: 260 PPPMDC---------PSALHQLM---LDCWQKDRNHRPKFGQIVNTLDKMIR 299
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 162 YLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 275
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 159
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 160 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 273
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 274 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 149
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 150 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 206
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 207 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 263
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 264 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 297
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 162 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 275
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 162 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 275
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 162 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 275
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L + I V EY+ SL L G T ++L + D+ I
Sbjct: 57 MKKLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQI 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 114 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK 170
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 171 WTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 162 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 275
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + +++ EY+EN SLD L K + + + + GI G+
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMK 145
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFG++++ D+ T G + A
Sbjct: 146 YLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 202
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 203 PEAIAYRKFTSASDVWSYGIVMWEVMS--YGERPYWDMSNQDVIKAIEEGYRLPPPMDCP 260
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
I ++ C Q S RP+ Q++ ML K IR
Sbjct: 261 ------------IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 293
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 132
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 133 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 246
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 247 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V EY+EN SLD L K + + + + GIA G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL ++ D+ T G + +
Sbjct: 162 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 275
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + +++ EY+EN SLD L K + + + + GI G+
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMK 124
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFG++++ D+ T G + A
Sbjct: 125 YLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 181
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMS--YGERPYWDMSNQDVIKAIEEGYRLPPPMDCP 239
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
I ++ C Q S RP+ Q++ ML K IR
Sbjct: 240 ------------IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 272
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G T ++L + D+ I
Sbjct: 60 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQI 116
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 117 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 173
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 174 WTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + +++ EY+EN SLD L K + + + + GI G+
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMK 130
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFG++++ D+ T G + A
Sbjct: 131 YLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 187
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMS--YGERPYWDMSNQDVIKAIEEGYRLPPPMDCP 245
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
I ++ C Q S RP+ Q++ ML K IR
Sbjct: 246 ------------IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 278
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G T ++L + D+ I
Sbjct: 64 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQI 120
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 121 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK 177
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G T ++L + D+ I
Sbjct: 64 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQI 120
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 121 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 177
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G T ++L + D+ I
Sbjct: 233 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQI 289
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 290 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G T ++L + D+ I
Sbjct: 233 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQI 289
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 290 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G T ++L + D+ I
Sbjct: 233 MKKLRHEKLVQLYAV-VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQI 289
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 290 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G ++L + D+ I
Sbjct: 67 MKKIRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 124 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G T ++L + D+ I
Sbjct: 316 MKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQI 372
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 373 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 429
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L + I++ EY+ SL L G ++L + D+ I
Sbjct: 67 MKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 124 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK 180
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 38/240 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLG------------ATKANIKL 50
L+N++H ++V+ G C G I+V+EY+++ L++ L +A +L
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 51 NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 110
+ I IA G+ +L + H VHRD+ N L+ KIGDFG+++ D
Sbjct: 131 GLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSR---DVY 184
Query: 111 THITTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQM-N 165
+ R+ G T ++ PE ++ + T ++DV+SFGV++ EI + GK W Q+ N
Sbjct: 185 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT---YGKQPWFQLSN 241
Query: 166 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 225
++E Q E+P P E+ V C Q +R + ++ K+L
Sbjct: 242 TEVIECITQGRVLERP---------RVCPKEV---YDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G +G ++V EY+EN SLD L + + + + G+ G+
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A N+L+D K+ DFGL+++ D+ T G + A
Sbjct: 166 YLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTA 222
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + +DV+SFGV++ E+++ + W N+ ++ + ++ P+
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLA--YGERPYWNMTNRDVISSVEEGYRLPAPMGC- 279
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNE 233
P+ + + M C ++RP+ +Q++ +L IR E
Sbjct: 280 --------PHALHQLM---LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L + I++ EY+ SL L G ++L + D+ I
Sbjct: 67 MKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 124 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G +G ++V EY+EN SLD L + + + + G+ G+
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A N+L+D K+ DFGL+++ D+ T G + A
Sbjct: 166 YLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTA 222
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + +DV+SFGV++ E+++ + W N+ ++ + ++ P+
Sbjct: 223 PEAIAFRTFSSASDVWSFGVVMWEVLA--YGERPYWNMTNRDVISSVEEGYRLPAPMGC- 279
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNE 233
P+ + + M C ++RP+ +Q++ +L IR E
Sbjct: 280 --------PHALHQLM---LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G ++L + D+ I
Sbjct: 58 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 115 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 171
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+ LS V HP ++ + G + ++ +Y+E L +L + + + +++C+
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL 117
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
L +LH + I++RD+K NILLD+ + KI DFG AK PD +T + GT
Sbjct: 118 A----LEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGT 166
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
Y+APE V D +SFG+L+ E+++G
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G ++L + D+ I
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 124 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G ++L + D+ I
Sbjct: 56 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 113 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 169
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 23/164 (14%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+++ IG + R + EY++ +L ++ + + W +R IA G+A
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKDIASGMA 122
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---------------PDNITH 112
+LH +I+HRD+ + N L+ + N + DFGLA+L PD
Sbjct: 123 YLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 113 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS 156
T + G ++APE + G K DV+SFG+++ EII N+
Sbjct: 180 YT--VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA 221
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 24/227 (10%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + T +++ E++EN SLD L + + + + + GIA G+
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGT--TGY 123
+L + + VHR + A NIL++ K+ DFGL++ D+ + T+ + G +
Sbjct: 124 YLADM---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 180
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLE 183
APE + + T +DV+S+G+++ E++S + W N+ ++ Q ++ P++
Sbjct: 181 TAPEAIQYRKFTSASDVWSYGIVMWEVMS--YGERPYWDMTNQDVINAIEQDYRLPPPMD 238
Query: 184 LVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P+ + + M C Q + RP+ Q++ L K IR
Sbjct: 239 C---------PSALHQLM---LDCWQKDRNHRPKFGQIVNTLDKMIR 273
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G ++L + D+ I
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 124 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V E +EN SLD L K + + + + GIA G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 162 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 275
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V E +EN SLD L K + + + + GIA G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 161
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 162 YLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 275
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN++ L G + ++V E +EN SLD L K + + + + GIA G+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMK 132
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 125
+L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +
Sbjct: 133 YLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 185
PE + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC- 246
Query: 186 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 247 --------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G ++L + D+ I
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD+ A+NIL+ + K+ DFGLA+L DN
Sbjct: 124 ASGMAYVERM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDIC 59
+ + HP LV+L G C++ LV+E++E+ L R G A L +C
Sbjct: 59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MC 112
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
+ + +G+A+L E V +HRD+ A N L+ + K+ DFG+ + D+ +T
Sbjct: 113 LDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 169
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ +PE + + K+DV+SFGVL+ E+ S
Sbjct: 170 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ L L G ++L + D+ I
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 124 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDIC 59
+ + HP LV+L G C++ LV+E++E+ L R G A L +C
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MC 109
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
+ + +G+A+L E V +HRD+ A N L+ + K+ DFG+ + D+ +T
Sbjct: 110 LDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 166
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ +PE + + K+DV+SFGVL+ E+ S
Sbjct: 167 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDIC 59
+ + HP LV+L G C++ LV+E++E+ L R G A L +C
Sbjct: 54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MC 107
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
+ + +G+A+L E V +HRD+ A N L+ + K+ DFG+ + D+ +T
Sbjct: 108 LDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 164
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ +PE + + K+DV+SFGVL+ E+ S
Sbjct: 165 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ L L G ++L + D+ I
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGLA+L DN
Sbjct: 124 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDIC 59
+ + HP LV+L G C++ LV+E++E+ L R G A L +C
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MC 129
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
+ + +G+A+L E V +HRD+ A N L+ + K+ DFG+ + D+ +T
Sbjct: 130 LDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 186
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ +PE + + K+DV+SFGVL+ E+ S
Sbjct: 187 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDICVG 61
+ HP LV+L G C++ LV+E++E+ L R G A L +C+
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLD 111
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ +G+A+L E ++HRD+ A N L+ + K+ DFG+ + D+ +T
Sbjct: 112 VCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ +PE + + K+DV+SFGVL+ E+ S
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ +RH LV+L V +V EY+ SL L G ++L + D+ I
Sbjct: 234 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQI 290
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + VHRD++A+NIL+ + K+ DFGL +L DN
Sbjct: 291 ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIK 347
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE L G+ T+K+DV+SFG+L+ E+ +
Sbjct: 348 WTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 119
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + T ++GT Y
Sbjct: 120 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLSGTLDY 173
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 118
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 119 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TELCGTLDY 172
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 144
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 145 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 198
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 121
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 175
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 117
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 118 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 171
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 135
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 136 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 189
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 118
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TXLCGTLDY 172
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 123
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 177
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 118
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDY 172
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L + ++ EY+ SL L + L K D I
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQI 119
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+A++ + + +HRD++A+N+L+ + KI DFGLA++ DN
Sbjct: 120 AEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK 176
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L+ EI++
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 42/242 (17%)
Query: 3 LSNVRHPNLVELIGCCV-QGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L + H ++++ GCC QG + + LV EYV SL L + +L +
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---- 125
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I +G+A+LH + H +HR++ A N+LLD + KIGDFGLAK P+ + R G
Sbjct: 126 -ICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA-----------MWGQMNKF 167
+ + APE + + +DV+SFGV + E+++ +S ++ GQM
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 241
Query: 168 ----LLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIK 223
LLE +L + +K P E+ MK C + AS RP +I
Sbjct: 242 RLTELLERGERLPRPDK------------CPCEVYHLMKN---CWETEASFRPTFENLIP 286
Query: 224 ML 225
+L
Sbjct: 287 IL 288
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL-----------GATKANIKLN 51
L+ ++H ++V G C +G ++V+EY+ + L+R L G A L
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 52 WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNI 110
+ + +A G+ +L H VHRD+ N L+ Q KIGDFG+++ ++ +
Sbjct: 134 LGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 190
Query: 111 THITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ R ++ PE +L + T ++DV+SFGV++ EI + GK W Q++
Sbjct: 191 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT---YGKQPWYQLS 242
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 121
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 175
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 118
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 172
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 118
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDY 172
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 123
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 124 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDY 177
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 119
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 120 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDY 173
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 123
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 124 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 177
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 122
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 123 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 176
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL-----------GATKANIKLN 51
L+ ++H ++V G C +G ++V+EY+ + L+R L G A L
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 52 WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNI 110
+ + +A G+ +L H VHRD+ N L+ Q KIGDFG+++ ++ +
Sbjct: 128 LGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 184
Query: 111 THITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ R ++ PE +L + T ++DV+SFGV++ EI + GK W Q++
Sbjct: 185 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT---YGKQPWYQLS 236
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 115
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 116 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 169
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDIC 59
+ + HP LV+L G C++ LV E++E+ L R G A L +C
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG------MC 110
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
+ + +G+A+L E V +HRD+ A N L+ + K+ DFG+ + D+ +T
Sbjct: 111 LDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 167
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ +PE + + K+DV+SFGVL+ E+ S
Sbjct: 168 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 44/243 (18%)
Query: 3 LSNVRHPNLVELIGCCV-QGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L + H ++V+ GCC QG + + LV EYV SL L CV
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------------PRHCV 108
Query: 61 GIAK----------GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 110
G+A+ G+A+LH + H +HR + A N+LLD + KIGDFGLAK P+
Sbjct: 109 GLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 165
Query: 111 THITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFL 168
+ R G + + APE + + +DV+SFGV + E+++ +S ++ + + +
Sbjct: 166 EYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 225
Query: 169 LEWAWQL------HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVI 222
Q+ E+ L P+ P EI MK C + AS RP ++
Sbjct: 226 GHTQGQMTVLRLTELLERGERLPRPDRC---PCEIYHLMKN---CWETEASFRPTFQNLV 279
Query: 223 KML 225
+L
Sbjct: 280 PIL 282
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 44/243 (18%)
Query: 3 LSNVRHPNLVELIGCCV-QGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L + H ++V+ GCC QG + + LV EYV SL L CV
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------------PRHCV 109
Query: 61 GIAK----------GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 110
G+A+ G+A+LH + H +HR + A N+LLD + KIGDFGLAK P+
Sbjct: 110 GLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 166
Query: 111 THITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFL 168
+ R G + + APE + + +DV+SFGV + E+++ +S ++ + + +
Sbjct: 167 EYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 226
Query: 169 LEWAWQL------HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVI 222
Q+ E+ L P+ P EI MK C + AS RP ++
Sbjct: 227 GHTQGQMTVLRLTELLERGERLPRPDRC---PCEIYHLMKN---CWETEASFRPTFQNLV 280
Query: 223 KML 225
+L
Sbjct: 281 PIL 283
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL-----------GATKANIKLN 51
L+ ++H ++V G C +G ++V+EY+ + L+R L G A L
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 52 WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNI 110
+ + +A G+ +L H VHRD+ N L+ Q KIGDFG+++ ++ +
Sbjct: 157 LGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 213
Query: 111 THITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ R ++ PE +L + T ++DV+SFGV++ EI + GK W Q++
Sbjct: 214 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT---YGKQPWYQLS 265
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 42/242 (17%)
Query: 3 LSNVRHPNLVELIGCCV-QGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L + H ++++ GCC QG + + LV EYV SL L + +L +
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---- 125
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I +G+A+LH + H +HR++ A N+LLD + KIGDFGLAK P+ + R G
Sbjct: 126 -ICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA-----------MWGQMNKF 167
+ + APE + + +DV+SFGV + E+++ +S ++ GQM
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 241
Query: 168 ----LLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIK 223
LLE +L + +K P E+ MK C + AS RP +I
Sbjct: 242 RLTELLERGERLPRPDK------------CPCEVYHLMKN---CWETEASFRPTFENLIP 286
Query: 224 ML 225
+L
Sbjct: 287 IL 288
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
T+ + HP LV+ G C + +V EY+ N L L K L + ++C
Sbjct: 56 TMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYD 112
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN--ITHITTRIAG 119
+ +G+AFL +HRD+ A N L+D++ K+ DFG+ + D+ ++ + T+
Sbjct: 113 VCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP- 168
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + K+DV++FG+L+ E+ S
Sbjct: 169 -VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY + + L +K + ++ + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELA 123
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 124 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDY 177
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%), Gaps = 34/237 (14%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV-- 60
+ HPN++ L G +++ E++EN +LD L +LN + + I +
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--------RLNDGQFTVIQLVG 120
Query: 61 ---GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITT 115
GIA G+ +L E VHRD+ A NIL++ K+ DFGL++ +N + T+
Sbjct: 121 MLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTS 177
Query: 116 RIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAW 173
+ G + APE + + T +D +S+G+++ E++S + W N+ ++
Sbjct: 178 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS--FGERPYWDMSNQDVIN--- 232
Query: 174 QLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
+ Q+ + + P PP+ ++ C Q + RP+ QV+ L K IR
Sbjct: 233 AIEQDYR----LPP-----PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 280
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTR----RILVYEYVENNSLDRVLLGATKANIKLNWEKRSD 57
+L ++H N+++ IG +GT L+ + E SL L KAN+ ++W +
Sbjct: 71 SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KANV-VSWNELCH 125
Query: 58 ICVGIAKGLAFLHEEL-------VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 110
I +A+GLA+LHE++ P I HRDIK+ N+LL I DFGLA F
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 111 THITTR-IAGTTGYLAPEYVLGG-----QLTMKADVYSFGVLVLEIIS 152
+ T GT Y+APE + G ++ D+Y+ G+++ E+ S
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 118
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDY 172
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 40/249 (16%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
+H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 58 ---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I HI
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 204
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPVEELF 262
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 263 KLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIV 310
Query: 230 RL--NEEEL 236
L N+E L
Sbjct: 311 ALTSNQEXL 319
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV+L + I+ E++ SL L + L K D I
Sbjct: 64 MKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQI 120
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+AF+ + + +HRD++A+NIL+ KI DFGLA++ DN
Sbjct: 121 AEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 177
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GR 154
+ APE + G T+K+DV+SFG+L++EI++ GR
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 120
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI +FG + P + T + GT Y
Sbjct: 121 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDY 174
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 121
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDY 175
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 144
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 145 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDY 198
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 15/151 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L +RHPN ++ GC ++ LV EY ++ D LL K L + + + G
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKK--PLQEVEIAAVTHGA 163
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLA+LH +++HRD+KA NILL + K+GDFG A +I GT
Sbjct: 164 LQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANXFVGTPY 215
Query: 123 YLAPEYVLG---GQLTMKADVYSFGVLVLEI 150
++APE +L GQ K DV+S G+ +E+
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 120
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 121 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDY 174
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L ++ + ++ + +A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELA 122
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + T + GT Y
Sbjct: 123 NALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---TTLCGTLDY 176
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
L PE + G K D++S GVL E + G
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 119
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 120 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCGTLDY 173
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 121
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI +FG + P + T + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDY 175
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 121
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDY 175
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENN---SLDRVLLGATKANIKLNWEKRSDIC 59
+ ++H N+V L + LV+E+++N+ +D +G T ++LN K
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY--FQ 114
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
+ +GLAF HE I+HRD+K N+L+++ K+GDFGLA+ F + ++ +
Sbjct: 115 WQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV- 170
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGR 154
T Y AP+ ++G + + D++S G ++ E+I+G+
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 118
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDY 172
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 22/230 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ H N++ L G + +++ EY+EN +LD+ L + + + + + + GI
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGI 156
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN--ITHITTRIAGT 120
A G+ +L + VHRD+ A NIL++ K+ DFGL+++ D+ T+ T+
Sbjct: 157 AAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEK 180
+ APE + + T +DV+SFG+++ E+++ + W N +++ +
Sbjct: 214 IRWTAPEAISYRKFTSASDVWSFGIVMWEVMT--YGERPYWELSNHEVMKAINDGFRLPT 271
Query: 181 PLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
P++ P+ I + M C Q +RRP+ ++ +L K IR
Sbjct: 272 PMDC---------PSAIYQLM---MQCWQQERARRPKFADIVSILDKLIR 309
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 42/242 (17%)
Query: 3 LSNVRHPNLVELIGCC--VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L + H ++++ GCC LV EYV SL L + +L +
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---- 142
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I +G+A+LH + H +HRD+ A N+LLD + KIGDFGLAK P+ R G
Sbjct: 143 -ICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA-----------MWGQMNKF 167
+ + APE + + +DV+SFGV + E+++ +S ++ GQM
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 258
Query: 168 ----LLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIK 223
LLE +L + +K P E+ MK C + AS RP +I
Sbjct: 259 RLTELLERGERLPRPDK------------CPAEVYHLMKN---CWETEASFRPTFENLIP 303
Query: 224 ML 225
+L
Sbjct: 304 IL 305
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 34/237 (14%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV-- 60
+ HPN++ L G +++ E++EN +LD L +LN + + I +
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--------RLNDGQFTVIQLVG 122
Query: 61 ---GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI--TT 115
GIA G+ +L E VHRD+ A NIL++ K+ DFGL++ +N + T+
Sbjct: 123 MLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETS 179
Query: 116 RIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAW 173
+ G + APE + + T +D +S+G+++ E++S + W N+ ++
Sbjct: 180 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS--FGERPYWDMSNQDVINAIE 237
Query: 174 QLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
Q ++ + P PP+ ++ C Q + RP+ QV+ L K IR
Sbjct: 238 QDYR-------LPP-----PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 282
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 15/151 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L +RHPN ++ GC ++ LV EY ++ D LL K L + + + G
Sbjct: 69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKK--PLQEVEIAAVTHGA 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLA+LH +++HRD+KA NILL + K+GDFG A +I GT
Sbjct: 125 LQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANXFVGTPY 176
Query: 123 YLAPEYVLG---GQLTMKADVYSFGVLVLEI 150
++APE +L GQ K DV+S G+ +E+
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV+L + I V EY+ SL L +KL D+ +
Sbjct: 58 MKKLKHDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQV 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A++ + +HRD++++NIL+ KI DFGLA+L DN
Sbjct: 115 AAGMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK 171
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ APE L G+ T+K+DV+SFG+L+ E+++ G+ + MN
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVT---KGRVPYPGMN 211
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 118
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 119 NALSYCHSKKV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDY 172
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----------ANIKLNWEKRS 56
+H N+V L+G C G +++ EY L L ++ AN L+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 57 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 116
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +I
Sbjct: 168 HFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 117 IAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
A ++APE + T+++DV+S+G+L+ EI S
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L +K + ++ + +A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELA 121
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + ++HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDY 175
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK------LNWEKRSDICV 60
+H N+V L+G C G +++ EY L L +A++ L
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG- 119
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +I A
Sbjct: 160 QVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
++APE + T+++DV+S+G+L+ EI S
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
+H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 58 ---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I HI
Sbjct: 193 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 245
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPVEELF 303
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 304 KLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIV 351
Query: 230 RLNEEE 235
L +
Sbjct: 352 ALTSNQ 357
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY + + L +K + ++ + +A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELA 123
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 124 NALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLXGTLDY 177
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
L PE + G K D++S GVL E + G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + +H N+VE+ + G ++ E+++ +L ++ + ++LN E+ + +C +
Sbjct: 96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAV 150
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ LA+LH + ++HRDIK+ +ILL + K+ DFG ++ + GT
Sbjct: 151 LQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPY 206
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + + D++S G++V+E++ G
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK------LNWEKRSDICV 60
+H N+V L+G C G +++ EY L L +A++ L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG- 119
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +I A
Sbjct: 168 QVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
++APE + T+++DV+S+G+L+ EI S
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 57 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 116
D IA+G+AF+ + + +HRD++A+NIL+ KI DFGLA++ DN
Sbjct: 288 DFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344
Query: 117 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K+DV+SFG+L++EI++
Sbjct: 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 142 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 196
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHIT 114
G +AKG+ FL + VHRD+ A N +LD++F K+ DFGLA+ D + H
Sbjct: 197 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 308
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + M C A RP ++++ ++
Sbjct: 309 LLQGRR---LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 351
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
+H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 58 ---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I HI
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 204
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPVEELF 262
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 263 KLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIV 310
Query: 230 RLNEEE 235
L +
Sbjct: 311 ALTSNQ 316
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
+H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 58 ---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I HI
Sbjct: 144 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 196
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPVEELF 254
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 255 KLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIV 302
Query: 230 RLNEEE 235
L +
Sbjct: 303 ALTSNQ 308
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
+H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 58 ---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I HI
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 204
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPVEELF 262
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 263 KLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIV 310
Query: 230 RLNEEE 235
L +
Sbjct: 311 ALTSNQ 316
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 137
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHIT 114
G +AKG+ FL + VHRD+ A N +LD++F K+ DFGLA+ D + H
Sbjct: 138 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 249
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + M C A RP ++++ ++
Sbjct: 250 LLQGRR---LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 292
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
+H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 58 ---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I HI
Sbjct: 141 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 193
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPVEELF 251
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 252 KLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIV 299
Query: 230 RLNEEE 235
L +
Sbjct: 300 ALTSNQ 305
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 135
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHIT 114
G +AKG+ FL + VHRD+ A N +LD++F K+ DFGLA+ D + H
Sbjct: 136 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 192
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 247
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + M C A RP ++++ ++
Sbjct: 248 LLQGRR---LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 290
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 88 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 142
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHIT 114
G +AKG+ FL + VHRD+ A N +LD++F K+ DFGLA+ D + H
Sbjct: 143 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 200 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 254
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + M C A RP ++++ ++
Sbjct: 255 LLQGRR---LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 297
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
+H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 58 ---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I HI
Sbjct: 145 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 197
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPVEELF 255
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 256 KLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIV 303
Query: 230 RLNEEE 235
L +
Sbjct: 304 ALTSNQ 309
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 137
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHIT 114
G +AKG+ FL + VHRD+ A N +LD++F K+ DFGLA+ D + H
Sbjct: 138 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 249
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + M C A RP ++++ ++
Sbjct: 250 LLQGRR---LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 292
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWE 53
H N+V L+G C G +++ EY L D + T I L+ E
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++
Sbjct: 169 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 114 TTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLL 169
A ++APE + T ++DV+S+G+ + E+ S +S G + + K +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 286 EGFRMLSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 329
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 138
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHIT 114
G +AKG+ FL + VHRD+ A N +LD++F K+ DFGLA+ D + H
Sbjct: 139 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 250
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + M C A RP ++++ ++
Sbjct: 251 LLQGRR---LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 293
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 138
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHIT 114
G +AKG+ FL + VHRD+ A N +LD++F K+ DFGLA+ D + H
Sbjct: 139 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 250
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + M C A RP ++++ ++
Sbjct: 251 LLQGRR---LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 293
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 88/156 (56%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L + K +K DI
Sbjct: 62 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQT 117
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 118 ARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWE 53
H N+V L+G C G +++ EY L D + T I L+ E
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++
Sbjct: 169 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 114 TTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLL 169
A ++APE + T ++DV+S+G+ + E+ S +S G + + K +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 286 EGFRMLSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 329
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWE 53
H N+V L+G C G +++ EY L D + T I L+ E
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++
Sbjct: 164 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 114 TTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLL 169
A ++APE + T ++DV+S+G+ + E+ S +S G + + K +
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 281 EGFRMLSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 324
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV L + ++ E++ SL L + L K D I
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQI 118
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A+G+A++ + + +HRD++A+N+L+ + KI DFGLA++ DN
Sbjct: 119 AEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK 175
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + G T+K++V+SFG+L+ EI++
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HP LV L C +R V EYV L + + KL E I+ L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLA 125
+LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+A
Sbjct: 136 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 189
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRN 155
PE + G D ++ GVL+ E+++GR+
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 219
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWE 53
H N+V L+G C G +++ EY L D + T I L+ E
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++
Sbjct: 162 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 114 TTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLL 169
A ++APE + T ++DV+S+G+ + E+ S +S G + + K +
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 279 EGFRMLSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 322
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 121
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 122 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HP LV L C +R V EYV L + + KL E I+ L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLA 125
+LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+A
Sbjct: 121 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 174
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRN 155
PE + G D ++ GVL+ E+++GR+
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 204
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWE 53
H N+V L+G C G +++ EY L D + T I L+ E
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++
Sbjct: 146 DLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 114 TTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLL 169
A ++APE + T ++DV+S+G+ + E+ S +S G + + K +
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 263 EGFRMLSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 306
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HP LV L C +R V EYV L + + KL E I+ L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLA 125
+LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+A
Sbjct: 125 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 178
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRN 155
PE + G D ++ GVL+ E+++GR+
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L P +V G + E+++ SLD+VL K ++ E + + +
Sbjct: 68 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAV 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLA+L E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT
Sbjct: 124 LRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRS 178
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y+APE + G ++++D++S G+ ++E+ GR
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 14/156 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATK--ANIKLNWEKRSDI 58
L +++H N+V+ G C RR L+ EY+ SL L + +IKL + S I
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL-LQYTSQI 126
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
C KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + +
Sbjct: 127 C----KGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 119 GTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
G + + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 40/249 (16%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI------------KLNWEK 54
+H N++ L+G C Q ++ EY +L L + +L+ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 55 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I HI
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 204
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPVEELF 262
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 263 KLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIV 310
Query: 230 RL--NEEEL 236
L N+E L
Sbjct: 311 ALTSNQEYL 319
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ L G TR L+ EY ++ R L ++ + ++ + +A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELA 122
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L++ H + V +HRDIK N+LL KI DFG + P + + GT Y
Sbjct: 123 NALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDY 176
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
L PE + G K D++S GVL E + G
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 152
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 153 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 209
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HP LV L C +R V EYV L + + KL E I+ L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLA 125
+LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+A
Sbjct: 168 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIA 221
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRN 155
PE + G D ++ GVL+ E+++GR+
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 251
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 127
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 128 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI------------KLNWEK 54
+H N++ L+G C Q ++ EY +L L + +L+ +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 55 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I HI
Sbjct: 137 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHID 189
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPVEELF 247
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 248 KLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIV 295
Query: 230 RLNEEE 235
L +
Sbjct: 296 ALTSNQ 301
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 126
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 127 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 119
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 120 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 125
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 126 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 121
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 122 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 120
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 121 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + H N+V++ + G +V E++E +L ++ + ++N E+ + +C+ +
Sbjct: 96 MRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIATVCLSV 150
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ L++LH + ++HRDIK+ +ILL + K+ DFG + + GT
Sbjct: 151 LRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RKXLVGTPY 206
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + + D++S G++V+E+I G
Sbjct: 207 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 128
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 129 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 185
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 186 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 124
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 125 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 121
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 122 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 139
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 140 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 139
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 140 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 196
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 3 LSNVRHPNLVELIGCCVQ--GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L N+ H N+V+ G C + G L+ E++ + SL L K K+N +++ V
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAV 133
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L VHRD+ A N+L++ E KIGDFGL K + T +
Sbjct: 134 QICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRD 190
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 159
+ + APE ++ + + +DV+SFGV + E+++ +S +
Sbjct: 191 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 3 LSNVRHPNLVELIGCCVQ--GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L N+ H N+V+ G C + G L+ E++ + SL L K K+N +++ V
Sbjct: 65 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAV 121
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L VHRD+ A N+L++ E KIGDFGL K + T +
Sbjct: 122 QICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRD 178
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 159
+ + APE ++ + + +DV+SFGV + E+++ +S +
Sbjct: 179 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS 219
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----------ANIKLNWEKRS 56
+H N+V L+G C G +++ EY L L ++ AN +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 57 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 116
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +I
Sbjct: 168 HFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 117 IAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
A ++APE + T+++DV+S+G+L+ EI S
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 40/249 (16%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 269
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 270 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 317
Query: 230 RL--NEEEL 236
L NEE L
Sbjct: 318 TLTTNEEYL 326
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ EY+ SL L K +++ K
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTS 122
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HR++ NIL++ E KIGDFGL K+ P + + + G
Sbjct: 123 QICKGMEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 179
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 180 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 40/249 (16%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 269
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 270 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 317
Query: 230 RL--NEEEL 236
L NEE L
Sbjct: 318 TLTTNEEYL 326
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 102 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 156
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 157 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 214 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 268
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + +V C A RP ++++ ++
Sbjct: 269 LLQGRR---LLQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 87/156 (55%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L + K +K DI
Sbjct: 74 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQT 129
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + +H +++G+
Sbjct: 130 ARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 136
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 137 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNK 193
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 248
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + M C A RP ++++ ++
Sbjct: 249 LLQGRR---LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 291
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L +++H N+V+ G C RR L+ E++ SL L K +++ K
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTS 124
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 120
I KG+ +L +HRD+ NIL++ E KIGDFGL K+ P + + G
Sbjct: 125 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 121 TG--YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + APE + + ++ +DV+SFGV++ E+ +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 101 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 155
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 156 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 212
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 213 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 267
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + M C A RP ++++ ++
Sbjct: 268 LLQGRR---LLQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 310
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 80 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 134
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 135 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 191
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 246
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + +V C A RP ++++ ++
Sbjct: 247 LLQGRR---LLQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 137
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 138 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 249
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + +V C A RP ++++ ++
Sbjct: 250 LLQGRR---LLQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 75 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 129
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 130 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 187 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 241
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + +V C A RP ++++ ++
Sbjct: 242 LLQGRR---LLQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 136
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 137 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 193
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 248
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + +V C A RP ++++ ++
Sbjct: 249 LLQGRR---LLQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + +H N+VE+ + G +V E++E +L ++ + ++N E+ + +C+ +
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAV 134
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ L+ LH + ++HRDIK+ +ILL + K+ DFG + + GT
Sbjct: 135 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPY 190
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + + D++S G++V+E++ G
Sbjct: 191 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 135
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 136 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 192
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 247
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + +V C A RP ++++ ++
Sbjct: 248 LLQGRR---LLQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + +H N+VE+ + G +V E++E +L ++ + ++N E+ + +C+ +
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAV 136
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ L+ LH + ++HRDIK+ +ILL + K+ DFG + + GT
Sbjct: 137 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPY 192
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + + D++S G++V+E++ G
Sbjct: 193 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + +V ++ E +SL L + K +K DI
Sbjct: 74 LRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQT 129
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + +H +++G+
Sbjct: 130 ARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 137
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 138 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 249
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + +V C A RP ++++ ++
Sbjct: 250 LLQGRR---LLQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVG 61
S + H N+V +I + LV EY+E +L + G + +N+ +
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQ------ 119
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I G+ H+ IVHRDIK NIL+D KI DFG+AK + T + GT
Sbjct: 120 ILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y +PE G D+YS G+++ E++ G
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 8 HPNLVELIGCCVQGTRRIL-VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
HP L + C Q + V EY+ L + ++ K + + + I GL
Sbjct: 78 HPFLTHMF-CTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI--THITTRIAGTTGYL 124
FLH + IV+RD+K NILLD++ + KI DFG+ K +N+ T GT Y+
Sbjct: 133 QFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEFCGTPDYI 186
Query: 125 APEYVLGGQLTMKADVYSFGVLVLEIISGRN 155
APE +LG + D +SFGVL+ E++ G++
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRR-ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
+ + + HPN++ L+G C++ ++V Y+++ L + T N + I
Sbjct: 78 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIG 132
Query: 60 VG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHIT 114
G +AKG+ +L + VHRD+ A N +LD++F K+ DFGLA+ D H
Sbjct: 133 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 189
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
T ++A E + + T K+DV+SFGVL+ E+++ G + +N F +
Sbjct: 190 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVY 244
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 226
L Q + L+ P EY P+ + +V C A RP ++++ ++
Sbjct: 245 LLQGRR---LLQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + +H N+VE+ + G +V E++E +L ++ + ++N E+ + +C+ +
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAV 125
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ L+ LH + ++HRDIK+ +ILL + K+ DFG + + GT
Sbjct: 126 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPY 181
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + + D++S G++V+E++ G
Sbjct: 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + +H N+VE+ + G +V E++E +L ++ + ++N E+ + +C+ +
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAV 179
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ L+ LH + ++HRDIK+ +ILL + K+ DFG + + GT
Sbjct: 180 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPY 235
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + + D++S G++V+E++ G
Sbjct: 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L +RH NLV L+ C + R LV+E+V++ LD + L L+++ I
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQI 133
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
G+ F H +I+HRDIK NIL+ Q K+ DFG A+ +A T
Sbjct: 134 INGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRW 189
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISG 153
Y APE ++G KA DV++ G LV E+ G
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + +H N+VE+ + G +V E++E +L ++ + ++N E+ + +C+ +
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAV 256
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ L+ LH + ++HRDIK+ +ILL + K+ DFG + + GT
Sbjct: 257 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPY 312
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + + D++S G++V+E++ G
Sbjct: 313 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 32/243 (13%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +NI +
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 260
Query: 115 TRIAG--TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWA 172
G ++APE + T ++DV+SFGVL+ EI + G G + L +
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL--GGSPYPGIPVEELFKLL 318
Query: 173 WQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLN 232
+ H+ +KP NE+ M+ C A S+RP Q+++ L + + L
Sbjct: 319 KEGHRMDKPANCT---------NELYMMMR---DCWHAVPSQRPTFKQLVEDLDRILTLT 366
Query: 233 EEE 235
E
Sbjct: 367 TNE 369
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + +H N+VE+ + G +V E++E +L ++ + ++N E+ + +C+ +
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAV 129
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ L+ LH + ++HRDIK+ +ILL + K+ DFG + + GT
Sbjct: 130 LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPY 185
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + + D++S G++V+E++ G
Sbjct: 186 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 8 HPNLVELIGCCVQGTRRIL-VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
HP L + C Q + V EY+ L + ++ K + + + I GL
Sbjct: 77 HPFLTHMF-CTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI--THITTRIAGTTGYL 124
FLH + IV+RD+K NILLD++ + KI DFG+ K +N+ T GT Y+
Sbjct: 132 QFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFCGTPDYI 185
Query: 125 APEYVLGGQLTMKADVYSFGVLVLEIISGRN 155
APE +LG + D +SFGVL+ E++ G++
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL---DRVLLGATKANIKLNWEKRSD 57
+ + ++ H ++V L+G C G+ LV +Y+ SL R GA + LNW
Sbjct: 85 LAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW----- 138
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
V IAKG+ +L E +VHR++ A N+LL ++ DFG+A L P + +
Sbjct: 139 -GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
A T ++A E + G+ T ++DV+S+GV V E+++
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 34/244 (13%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +NI +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 214
Query: 115 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWA 172
G ++APE + T ++DV+SFGVL+ EI + G G + L +
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELFKLL 272
Query: 173 WQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRL- 231
+ H+ +KP NE+ M+ C A S+RP Q+++ L + + L
Sbjct: 273 KEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRILTLT 320
Query: 232 -NEE 234
NEE
Sbjct: 321 TNEE 324
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 40/247 (16%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 269
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 270 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 317
Query: 230 RL--NEE 234
L NEE
Sbjct: 318 TLTTNEE 324
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
I + K L L E L I+HRDIK SNILLD+ N K+ DFG++ D+I TR
Sbjct: 130 ITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TRD 185
Query: 118 AGTTGYLAPEYVLGGQ----LTMKADVYSFGVLVLEIISGR---NSGKAMWGQMNKFLLE 170
AG Y+APE + +++DV+S G+ + E+ +GR +++ Q+ + +
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-- 243
Query: 171 WAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIK 223
+ P +L + E E+ P+ ++ C S+RP+ +++K
Sbjct: 244 -------KGDPPQLSNSEEREFSPS----FINFVNLCLTKDESKRPKYKELLK 285
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
+H N+V L+G C G +++ EY L L ++ ++ +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 58 ---ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +I
Sbjct: 168 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 115 TRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
A ++APE + T+++DV+S+G+L+ EI S
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 148 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNID 200
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 258
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 259 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 306
Query: 230 RLNEEE 235
L E
Sbjct: 307 TLTTNE 312
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 151 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNID 203
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 261
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 262 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 309
Query: 230 RLNEEE 235
L E
Sbjct: 310 TLTTNE 315
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 40/247 (16%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 269
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 270 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 317
Query: 230 RL--NEE 234
L NEE
Sbjct: 318 TLTTNEE 324
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL---DRVLLGATKANIKLNWEKRSD 57
+ + ++ H ++V L+G C G+ LV +Y+ SL R GA + LNW
Sbjct: 67 LAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW----- 120
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
V IAKG+ +L E +VHR++ A N+LL ++ DFG+A L P + +
Sbjct: 121 -GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
A T ++A E + G+ T ++DV+S+GV V E+++
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++ HPN++++ +V E E L ++ A L+ +++ +
Sbjct: 74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIA 118
LA+ H + H+VH+D+K NIL Q+ +P KI DFGLA+LF + +T A
Sbjct: 134 MNALAYFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSD--EHSTNAA 187
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE V +T K D++S GV++ +++G
Sbjct: 188 GTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 269
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 270 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 317
Query: 230 RLNEEE 235
L E
Sbjct: 318 TLTTNE 323
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L P +V G + E+++ SLD+VL K ++ + + +
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA 131
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ KGL +L E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT
Sbjct: 132 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTR 186
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKF-LLEW 171
Y++PE + G ++++D++S G+ ++E+ GR + G M F LL++
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDY 237
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 26/171 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG- 61
+ + +P +V LIG C Q +LV E L + L+G KR +I V
Sbjct: 64 MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG-----------KREEIPVSN 111
Query: 62 -------IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
++ G+ +L E+ + VHRD+ A N+LL KI DFGL+K + ++ T
Sbjct: 112 VAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168
Query: 115 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWG 162
R AG + APE + + + ++DV+S+GV + E +S G+ K M G
Sbjct: 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 219
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 58 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 114 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 31/233 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+SN+ HPN+V+L G R +V E+V L LL + W + + + I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDI 131
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLD--QEFNP---KIGDFGLAKLFPDNITHITTRI 117
A G+ ++ + P IVHRD+++ NI L E P K+ DFGL++ H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGL 186
Query: 118 AGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEIISGRNS-GKAMWGQMNKFLLEWAWQ 174
G ++APE + + T KAD YSF +++ I++G + +G++ KF+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFI-----N 240
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 227
+ +EE L PE + PP R V C +RP + ++K L++
Sbjct: 241 MIREEG-LRPTIPE--DCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 38/242 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 146 LVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLAR----DINNID 198
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 256
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 257 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 304
Query: 230 RL 231
L
Sbjct: 305 TL 306
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 63 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 118
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 119 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 60 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 115
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 116 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 40/247 (16%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ EY +L L ++ +++ K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + +I DFGLA+ +I +I
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLAR----DINNID 211
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 269
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 270 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 317
Query: 230 RL--NEE 234
L NEE
Sbjct: 318 TLTTNEE 324
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 63 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 118
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 119 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L P +V G + E+++ SLD+VL K ++ + + + +
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAV 175
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
KGL +L E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT
Sbjct: 176 IKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRS 230
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
+V EYV+ +L ++ K E +D C + L F H+ I+HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPA 145
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSF 143
NI++ K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVLVLEIISG 153
G ++ E+++G
Sbjct: 206 GCVLYEVLTG 215
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + +V ++ E +SL L K K DI
Sbjct: 58 LRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 114 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
+V EYV+ +L ++ K E +D C + L F H+ I+HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPA 145
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSF 143
NI++ K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVLVLEIISG 153
G ++ E+++G
Sbjct: 206 GCVLYEVLTG 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 32/226 (14%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVG 61
LS P + G ++ T+ ++ EY+ S LD + G L + I
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP------LEETYIATILRE 124
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-TRIAGT 120
I KGL +LH E +HRDIKA+N+LL ++ + K+ DFG+A D T I GT
Sbjct: 125 ILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGT 179
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG-----------------RNSGKAMWGQ 163
++APE + KAD++S G+ +E+ G +NS + GQ
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQ 239
Query: 164 MNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQ 209
+K E+ ++ EL ++ I RY K F T+
Sbjct: 240 HSKPFKEFVEACLNKDPRFRPTAKELLKH--KFITRYTKKTSFLTE 283
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 85 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 140
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 141 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
+V EYV+ +L ++ K E +D C + L F H+ I+HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPA 145
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSF 143
NI++ K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVLVLEIISG 153
G ++ E+++G
Sbjct: 206 GCVLYEVLTG 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
+V EYV+ +L ++ K E +D C + L F H+ I+HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPA 145
Query: 86 NILLDQEFNPKIGDFGLAKLFPD--NITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSF 143
NIL+ K+ DFG+A+ D N T + GT YL+PE G + ++DVYS
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVLVLEIISG 153
G ++ E+++G
Sbjct: 206 GCVLYEVLTG 215
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVG 61
LS P + + G ++ T+ ++ EY+ S LD + G L+ + + I
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIATILRE 112
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I KGL +LH E +HRDIKA+N+LL + K+ DFG+A D T + GT
Sbjct: 113 ILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTP 168
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + KAD++S G+ +E+ G
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
+V EYV+ +L ++ K E +D C + L F H+ I+HRD+K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPA 145
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSF 143
NI++ K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVLVLEIISG 153
G ++ E+++G
Sbjct: 206 GCVLYEVLTG 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 86 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 141
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 142 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
+V EYV+ +L ++ K E +D C + L F H+ I+HRD+K +
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSHQN---GIIHRDVKPA 162
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTTGYLAPEYVLGGQLTMKADVYSF 143
NI++ K+ DFG+A+ D+ +T A GT YL+PE G + ++DVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 144 GVLVLEIISG 153
G ++ E+++G
Sbjct: 223 GCVLYEVLTG 232
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L P +V G + E+++ SLD+VL K ++ + + +
Sbjct: 84 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA 139
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ KGL +L E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT
Sbjct: 140 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTR 194
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
++PN+V + + G +V EY+ SL V+ ++ + + +C + L
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQAL 129
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLA 125
FLH ++HRDIK+ NILL + + K+ DFG A++ P+ T + GT ++A
Sbjct: 130 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMA 184
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISG 153
PE V K D++S G++ +E+I G
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L ++HPN+V + T L V EY E L V+ TK L+ E +
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 61 GIAKGLAFLHE--ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ L H + ++HRD+K +N+ LD + N K+GDFGLA++ + + T
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FV 177
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
GT Y++PE + K+D++S G L+ E+ +
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRIL--------VYEYVENNSLDRVLLGATKANIKLNW 52
+ ++++ HP+LV L+G C+ T +++ + EYV + D + + + LNW
Sbjct: 92 LIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHK-DNI-----GSQLLLNW 145
Query: 53 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNIT 111
CV IAKG+ +L E +VHRD+ A N+L+ + KI DFGLA+L D
Sbjct: 146 ------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 196
Query: 112 HITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEW 171
+ ++A E + + T ++DV+S+GV + E+++ GK G
Sbjct: 197 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT--FGGKPYDG--------- 245
Query: 172 AWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRL 231
+ E P L E PP I V C A RP+ ++ ++ R
Sbjct: 246 ---IPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 302
Query: 232 NEEELTAPG 240
+ L G
Sbjct: 303 PQRYLVIQG 311
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L P +V G + E+++ SLD+VL K ++ + + +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA 112
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ KGL +L E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTR 167
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L P +V G + E+++ SLD+VL K ++ + + +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA 112
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ KGL +L E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTR 167
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 24/161 (14%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRIL--------VYEYVENNSLDRVLLGATKANIKLNW 52
+ ++++ HP+LV L+G C+ T +++ + EYV + D + + + LNW
Sbjct: 69 LIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHK-DNI-----GSQLLLNW 122
Query: 53 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNIT 111
CV IAKG+ +L E +VHRD+ A N+L+ + KI DFGLA+L D
Sbjct: 123 ------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 173
Query: 112 HITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ ++A E + + T ++DV+S+GV + E+++
Sbjct: 174 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L P +V G + E+++ SLD+VL K ++ + + +
Sbjct: 60 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA 115
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ KGL +L E+ I+HRD+K SNIL++ K+ DFG++ I + GT
Sbjct: 116 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGTR 170
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L P +V G + E+++ SLD+VL A + + + + +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ KGL +L E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTR 167
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L ++HPN+V + T L V EY E L V+ TK L+ E +
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 61 GIAKGLAFLHE--ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ L H + ++HRD+K +N+ LD + N K+GDFGLA++ ++ T
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKAFV 177
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
GT Y++PE + K+D++S G L+ E+ +
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L P +V G + E+++ SLD+VL K ++ + + +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA 112
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ KGL +L E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT
Sbjct: 113 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTR 167
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L P +V G + E+++ SLD+VL K ++ + + +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA 112
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ KGL +L E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT
Sbjct: 113 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTR 167
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y++PE + G ++++D++S G+ ++E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
++PN+V + + G +V EY+ SL V+ ++ + + +C + L
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQAL 129
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLA 125
FLH ++HRDIK+ NILL + + K+ DFG A++ P+ + + GT ++A
Sbjct: 130 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMA 184
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISG 153
PE V K D++S G++ +E+I G
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVG 61
LS P + + G ++ T+ ++ EY+ S LD + G L+ + + I
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIATILRE 132
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I KGL +LH E +HRDIKA+N+LL + K+ DFG+A D T + GT
Sbjct: 133 ILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTP 188
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
++APE + KAD++S G+ +E+ G
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 3 LSNVRHPNLVELIGCCV-----QGTRRILVYEYVENN---SLDRVLL-GATKANIKLNWE 53
L HPN+V L C + T+ LV+E+V+ + LD+V G IK
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---- 123
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
D+ + +GL FLH +VHRD+K NIL+ K+ DFGLA+++ +
Sbjct: 124 ---DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMA 175
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T + T Y APE +L D++S G + E+ + G + Q+ K L
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
++PN+V + + G +V EY+ SL V+ ++ + + +C + L
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQAL 130
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLA 125
FLH ++HRDIK+ NILL + + K+ DFG A++ P+ + + GT ++A
Sbjct: 131 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMA 185
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISG 153
PE V K D++S G++ +E+I G
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
++PN+V + + G +V EY+ SL V+ ++ + + +C + L
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQAL 129
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLA 125
FLH ++HRDIK+ NILL + + K+ DFG A++ P+ + + GT ++A
Sbjct: 130 EFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMA 184
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISG 153
PE V K D++S G++ +E+I G
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 26/183 (14%)
Query: 5 NVRHPNLVELIGCCVQGT----RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
++H NL++ I +G+ L+ + + SL L K NI + W + +
Sbjct: 65 GMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL----KGNI-ITWNELCHVAE 119
Query: 61 GIAKGLAFLHEEL--------VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNIT 111
+++GL++LHE++ P I HRD K+ N+LL + + DFGLA F P
Sbjct: 120 TMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPP 179
Query: 112 HITTRIAGTTGYLAPEYVLGG-----QLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNK 166
T GT Y+APE + G ++ D+Y+ G+++ E++S KA G +++
Sbjct: 180 GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS---RCKAADGPVDE 236
Query: 167 FLL 169
++L
Sbjct: 237 YML 239
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ Y +L L ++ +++ K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 269
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 270 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 317
Query: 230 RLNEEE 235
L E
Sbjct: 318 TLTTNE 323
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 3 LSNVRHPNLVELIGCCV-----QGTRRILVYEYVENN---SLDRVLL-GATKANIKLNWE 53
L HPN+V L C + T+ LV+E+V+ + LD+V G IK
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---- 123
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
D+ + +GL FLH +VHRD+K NIL+ K+ DFGLA+++ +
Sbjct: 124 ---DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMA 175
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T + T Y APE +L D++S G + E+ + G + Q+ K L
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
+H N+V L+G C G +++ EY L L +A + + D
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 58 ----------ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 108 DNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
++ +I A ++APE + T+++DV+S+G+L+ EI S
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVG 61
LS P + + G ++ T+ ++ EY+ S LD + G L+ + + I
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIATILRE 127
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-TRIAGT 120
I KGL +LH E +HRDIKA+N+LL + K+ DFG+A D T I GT
Sbjct: 128 ILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGT 182
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + KAD++S G+ +E+ G
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 58 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + +H +++G+
Sbjct: 114 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 170
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 3 LSNVRHPNLVELIGCCV-----QGTRRILVYEYVENN---SLDRVLL-GATKANIKLNWE 53
L HPN+V L C + T+ LV+E+V+ + LD+V G IK
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---- 123
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
D+ + +GL FLH +VHRD+K NIL+ K+ DFGLA+++ +
Sbjct: 124 ---DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMA 175
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T + T Y APE +L D++S G + E+ + G + Q+ K L
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
RHP++++L + +V EYV L N +L+ ++ + I G+
Sbjct: 74 RHPHIIKLYQVISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGV 129
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 126
+ H +V VHRD+K N+LLD N KI DFGL+ + D G+ Y AP
Sbjct: 130 DYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAP 184
Query: 127 EYVLGGQLTM--KADVYSFGVLVLEIISG 153
E V+ G+L + D++S GV++ ++ G
Sbjct: 185 E-VISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVG 61
LS P + + G ++ T+ ++ EY+ S LD + G L+ + + I
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIATILRE 112
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-TRIAGT 120
I KGL +LH E +HRDIKA+N+LL + K+ DFG+A D T I GT
Sbjct: 113 ILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGT 167
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + KAD++S G+ +E+ G
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 78 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 133
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + +H +++G+
Sbjct: 134 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 191 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 86 LRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQT 141
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + +H +++G+
Sbjct: 142 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 154
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 31/233 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+SN+ HPN+V+L G R +V E+V L LL + W + + + I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDI 131
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLD--QEFNP---KIGDFGLAKLFPDNITHITTRI 117
A G+ ++ + P IVHRD+++ NI L E P K+ DFG ++ H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGL 186
Query: 118 AGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEIISGRNS-GKAMWGQMNKFLLEWAWQ 174
G ++APE + + T KAD YSF +++ I++G + +G++ KF+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFI-----N 240
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 227
+ +EE L PE + PP R V C +RP + ++K L++
Sbjct: 241 MIREEG-LRPTIPE--DCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 31/233 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+SN+ HPN+V+L G R +V E+V L LL + W + + + I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDI 131
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLD--QEFNP---KIGDFGLAKLFPDNITHITTRI 117
A G+ ++ + P IVHRD+++ NI L E P K+ DF L++ H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGL 186
Query: 118 AGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEIISGRNS-GKAMWGQMNKFLLEWAWQ 174
G ++APE + + T KAD YSF +++ I++G + +G++ KF+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFI-----N 240
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 227
+ +EE L PE + PP R V C +RP + ++K L++
Sbjct: 241 MIREEG-LRPTIPE--DCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 38/246 (15%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE-----------KR 55
+H N++ L+G C Q ++ Y +L L ++ +++ K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 56 SDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I +I
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 115 TRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 169
T G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPVEELF 269
Query: 170 EWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
+ + H+ +KP NE+ M+ C A S+RP Q+++ L + +
Sbjct: 270 KLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRIL 317
Query: 230 RLNEEE 235
L E
Sbjct: 318 TLTTNE 323
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 26/171 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG- 61
+ + +P +V LIG C Q +LV E L + L+G KR +I V
Sbjct: 390 MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG-----------KREEIPVSN 437
Query: 62 -------IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
++ G+ +L E+ + VHR++ A N+LL KI DFGL+K + ++ T
Sbjct: 438 VAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494
Query: 115 TRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWG 162
R AG + APE + + + ++DV+S+GV + E +S G+ K M G
Sbjct: 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 545
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
LS + + G ++G++ ++ EY+ S +L ++ + + I
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI-----ATMLKEI 129
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
KGL +LH E +HRDIKA+N+LL ++ + K+ DFG+A D T + GT
Sbjct: 130 LKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPF 185
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + KAD++S G+ +E+ G
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKG 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 119
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 120 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 175
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
L ++HPN+V + T L V EY E L V+ TK L+ E +
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 61 GIAKGLAFLHE--ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ L H + ++HRD+K +N+ LD + N K+GDFGLA++ ++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAKEFV 177
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
GT Y++PE + K+D++S G L+ E+ +
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 23/156 (14%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++H LV+L + I+ E++ SL L + L K D I
Sbjct: 231 MKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQI 287
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPDNITHITTRIAG 119
A+G+AF+ + + +HRD++A+NIL+ KI DFGLA++ FP T
Sbjct: 288 AEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT-------- 336
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GR 154
APE + G T+K+DV+SFG+L++EI++ GR
Sbjct: 337 -----APEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
++PN+V + + G +V EY+ SL V+ ++ + + +C + L
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQAL 130
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLA 125
FLH ++HR+IK+ NILL + + K+ DFG A++ P+ T + GT ++A
Sbjct: 131 EFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMA 185
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISG 153
PE V K D++S G++ +E+I G
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 111
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 167
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 111
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 167
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 111
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 167
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENN---SLDRVLLGATKANIKLNWEKRSDIC 59
L + HPN+V LI LV+E++E + LD G + IK+
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-------YL 125
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
+ +G+A H+ I+HRD+K N+L++ + K+ DFGLA+ F + T +
Sbjct: 126 YQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV- 181
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
T Y AP+ ++G + + D++S G + E+I+G+
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENN---SLDRVLLGATKANIKLNWEKRSDIC 59
L + HPN+V LI LV+E++E + LD G + IK+
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-------YL 125
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
+ +G+A H+ I+HRD+K N+L++ + K+ DFGLA+ F + T +
Sbjct: 126 YQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV- 181
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
T Y AP+ ++G + + D++S G + E+I+G+
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 116
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 117 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 172
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 119
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 120 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 175
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 169
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I GL LH E IV+RD+K NILLD + +I D GLA P+ T I R+ GT
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTV 349
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 155
GY+APE V + T D ++ G L+ E+I+G++
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T AGT
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 159
G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E+V + L + + I L K +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEHVHQD-LKTFMDASALTGIPLPLIK--SYLFQL 111
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 167
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T AGT
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 159
G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I GL LH E IV+RD+K NILLD + +I D GLA P+ T I R+ GT
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTV 349
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 155
GY+APE V + T D ++ G L+ E+I+G++
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T AGT
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 159
G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T AGT
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 159
G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 84/159 (52%), Gaps = 24/159 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL----GATKANIKLNWEKRSDI 58
L+ HP +V+L+G + ++ E+ ++D ++L G T+ I++ +
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-------V 122
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
C + + L FLH + I+HRD+KA N+L+ E + ++ DFG++ N+ + R +
Sbjct: 123 CRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDS 176
Query: 119 --GTTGYLAPEYVLGGQL-----TMKADVYSFGVLVLEI 150
GT ++APE V+ + KAD++S G+ ++E+
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E+V+ + L + + + I L K +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEHVDQD-LKKFMDASALTGIPLPLIK--SYLFQL 115
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 125
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 182
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 9 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 68
P++V+ G + T +V EY S+ ++ K L ++ + I KGL +
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQSTLKGLEY 140
Query: 69 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 128
LH +HRDIKA NILL+ E + K+ DFG+A D + + GT ++APE
Sbjct: 141 LH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEV 196
Query: 129 VLGGQLTMKADVYSFGVLVLEIISGR 154
+ AD++S G+ +E+ G+
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 84/159 (52%), Gaps = 24/159 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL----GATKANIKLNWEKRSDI 58
L+ HP +V+L+G + ++ E+ ++D ++L G T+ I++ +
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-------V 114
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
C + + L FLH + I+HRD+KA N+L+ E + ++ DFG++ N+ + R +
Sbjct: 115 CRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDS 168
Query: 119 --GTTGYLAPEYVLGGQL-----TMKADVYSFGVLVLEI 150
GT ++APE V+ + KAD++S G+ ++E+
Sbjct: 169 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++ HPN+++L LV E+ E L ++ K + ++I I
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANIMKQI 155
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQE---FNPKIGDFGLAKLFPDNITHITTRIAG 119
G+ +LH+ +IVHRDIK NILL+ + N KI DFGL+ F + + R+ G
Sbjct: 156 LSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL-G 210
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y+APE VL + K DV+S GV++ ++ G
Sbjct: 211 TAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GL+F H ++HRD+K N+L++ E K+ DFGLA+ F + T + T
Sbjct: 113 LQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 125
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 125
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 121
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 122 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 178
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 24/162 (14%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + ++ D
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 58 --ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNI 110
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 149 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 111 THITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 206 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 121
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 122 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK 178
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 125 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 181
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 120
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLG--------------ATKANI 48
++ +PN+V+L+G C G L++EY+ L+ L +T+A +
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 49 K------LNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL 102
L+ ++ I +A G+A+L E VHRD+ N L+ + KI DFGL
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 103 AK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
++ ++ + A ++ PE + + T ++DV+++GV++ EI S
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 120
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 122
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK 179
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 133
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 134 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 190
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 125
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 122
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 122
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L+N++HPN+V+ + +V +Y E L + + + + ++ D V I
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQI 134
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
L +H+ I+HRDIK+ NI L ++ ++GDFG+A++ ++ + GT
Sbjct: 135 CLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPY 190
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLE 170
YL+PE K+D+++ G ++ E+ + +++ +A G M +L+
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--GSMKNLVLK 236
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L RH N++ +G + I V ++ E +SL + L K + DI
Sbjct: 86 LRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHL---HVQETKFQMFQLIDIARQT 141
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTT 121
A+G+ +LH + +I+HRD+K++NI L + KIGDFGLA + + + + G+
Sbjct: 142 AQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 122 GYLAPEYVL---GGQLTMKADVYSFGVLVLEIISG 153
++APE + + ++DVYS+G+++ E+++G
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYV--REHKDNIGSQYLLNW----- 123
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 124 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 239
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 240 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 284
Query: 236 LTAPG 240
L G
Sbjct: 285 LVIQG 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ N+ H LV+L G C + ++ EY+ N L L + + ++ ++C +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 129
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L + +HRD+ A N L++ + K+ DFGL++ D+ +
Sbjct: 130 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR 186
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ PE ++ + + K+D+++FGVL+ EI S
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYV--REHKDNIGSQYLLNW----- 122
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 123 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 239 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283
Query: 236 LTAPG 240
L G
Sbjct: 284 LVIQG 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ N+ H LV+L G C + ++ EY+ N L L + + ++ ++C +
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L + +HRD+ A N L++ + K+ DFGL++ D+ +
Sbjct: 115 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 171
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ PE ++ + + K+D+++FGVL+ EI S
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ N+ H LV+L G C + ++ EY+ N L L + + ++ ++C +
Sbjct: 57 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L + +HRD+ A N L++ + K+ DFGL++ D+ +
Sbjct: 114 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 170
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ PE ++ + + K+D+++FGVL+ EI S
Sbjct: 171 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 115 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 170
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 111
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 167
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 115 LQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 170
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ N+ H LV+L G C + ++ EY+ N L L + + ++ ++C +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 129
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L + +HRD+ A N L++ + K+ DFGL++ D+ +
Sbjct: 130 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ PE ++ + + K+D+++FGVL+ EI S
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 111
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 167
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 115
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 115 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 170
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW----- 122
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 123 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 239 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283
Query: 236 LTAPG 240
L G
Sbjct: 284 LVIQG 288
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 169
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 169
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ N+ H LV+L G C + ++ EY+ N L L + + ++ ++C +
Sbjct: 53 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 109
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L + +HRD+ A N L++ + K+ DFGL++ D+ +
Sbjct: 110 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 166
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ PE ++ + + K+D+++FGVL+ EI S
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW----- 123
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 124 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 239
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 240 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 284
Query: 236 LTAPG 240
L G
Sbjct: 285 LVIQG 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 169
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------ 156
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 157 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 273
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 274 Q---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 318
Query: 237 TAPG 240
G
Sbjct: 319 VIQG 322
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 116
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 117 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 172
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ N+ H LV+L G C + ++ EY+ N L L + + ++ ++C +
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 120
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L + +HRD+ A N L++ + K+ DFGL++ D+ +
Sbjct: 121 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 177
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ PE ++ + + K+D+++FGVL+ EI S
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQL 115
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR--EHKDNIGSQYLLNW----- 124
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 125 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 240
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 241 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 285
Query: 236 LTAPG 240
L G
Sbjct: 286 LVIQG 290
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
+RHP++++L I+V EY N D ++ K++ ++ I
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISA 115
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 125
+ + H IVHRD+K N+LLD+ N KI DFGL+ + D T+ G+ Y A
Sbjct: 116 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAA 170
Query: 126 PEYVLGGQLTM--KADVYSFGVLVLEIISGR 154
PE V+ G+L + DV+S GV++ ++ R
Sbjct: 171 PE-VISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR--EHKDNIGSQYLLNW----- 125
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 126 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 241
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 242 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 286
Query: 236 LTAPG 240
L G
Sbjct: 287 LVIQG 291
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ + +P +V +IG C + +LV E E L++ L + N + + ++
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQ 135
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT- 120
++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + + + G
Sbjct: 136 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 121 -TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ + +P +V +IG C + +LV E E L++ L + N + + ++
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQ 135
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT- 120
++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + + + G
Sbjct: 136 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 121 -TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR--EHKDNIGSQYLLNW----- 129
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 130 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 245
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 246 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 290
Query: 236 LTAPG 240
L G
Sbjct: 291 LVIQG 295
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
LV EY+ + L L + +L+ + I KG+ +L VHRD+ A
Sbjct: 90 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 143
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSF 143
NIL++ E + KI DFGLAKL P + + R G + + APE + + ++DV+SF
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 203
Query: 144 GVLVLEIIS 152
GV++ E+ +
Sbjct: 204 GVVLYELFT 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK---LNWEKRSDIC 59
+ ++HPNLV+L+G C + ++ E++ +L L + + L + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MA 115
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
I+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 116 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW----- 122
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 123 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 239 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283
Query: 236 LTAPG 240
L G
Sbjct: 284 LVIQG 288
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
LV EY+ + L L + +L+ + I KG+ +L VHRD+ A
Sbjct: 91 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 144
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSF 143
NIL++ E + KI DFGLAKL P + + R G + + APE + + ++DV+SF
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 204
Query: 144 GVLVLEIIS 152
GV++ E+ +
Sbjct: 205 GVVLYELFT 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR--EHKDNIGSQYLLNW----- 126
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 127 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 182
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 242
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 243 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 287
Query: 236 LTAPG 240
L G
Sbjct: 288 LVIQG 292
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
+RHP++++L I+V EY N D ++ K++ ++ I
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISA 125
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 125
+ + H IVHRD+K N+LLD+ N KI DFGL+ + D T+ G+ Y A
Sbjct: 126 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAA 180
Query: 126 PEYVLGGQLTM--KADVYSFGVLVLEIISGR 154
PE V+ G+L + DV+S GV++ ++ R
Sbjct: 181 PE-VISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
+RHP++++L I+V EY N D ++ K++ ++ I
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISA 124
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 125
+ + H IVHRD+K N+LLD+ N KI DFGL+ + D T+ G+ Y A
Sbjct: 125 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAA 179
Query: 126 PEYVLGGQLTM--KADVYSFGVLVLEIISGR 154
PE V+ G+L + DV+S GV++ ++ R
Sbjct: 180 PE-VISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 33/175 (18%)
Query: 6 VRHPNLVELIGCCVQGT----RRILVYEYVENNSLDRVLLGAT---KANIKLNWEKRSDI 58
+RH N++ I ++GT + L+ +Y EN SL L T K+ +KL + S
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVS-- 145
Query: 59 CVGIAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
GL LH E+ P I HRD+K+ NIL+ + I D GLA F + +
Sbjct: 146 ------GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV 199
Query: 114 ----TTRIAGTTGYLAPEYVLGGQLT-------MKADVYSFGVLVLEIISGRNSG 157
TR+ GT Y+ PE VL L + AD+YSFG+++ E+ SG
Sbjct: 200 DIPPNTRV-GTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW----- 116
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 117 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 232
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 233 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 277
Query: 236 LTAPG 240
L G
Sbjct: 278 LVIQG 282
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------ 122
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 239
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 240 Q---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 284
Query: 237 TAPG 240
G
Sbjct: 285 VIQG 288
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 31/232 (13%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL------------DRVLLGATKANIKLNWEKR 55
HPN++ L+G C L EY + +L D A L+ ++
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 115
+A+G+ +L ++ +HRD+ A NIL+ + + KI DFGL++ +
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 116 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL 175
R+ ++A E + T +DV+S+GVL+ EI+S G G L E Q
Sbjct: 192 RLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--LGGTPYCGMTCAELYEKLPQG 247
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 227
++ EKPL D E+ M+ C + RP Q++ L +
Sbjct: 248 YRLEKPLNCDD---------EVYDLMRQ---CWREKPYERPSFAQILVSLNR 287
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
+RHP++++L I+V EY N D ++ K++ ++ I
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISA 119
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 125
+ + H IVHRD+K N+LLD+ N KI DFGL+ + D T+ G+ Y A
Sbjct: 120 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAA 174
Query: 126 PEYVLGGQLTM--KADVYSFGVLVLEIISGR 154
PE V+ G+L + DV+S GV++ ++ R
Sbjct: 175 PE-VISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
LV EY+ + L L + +L+ + I KG+ +L VHRD+ A
Sbjct: 103 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 156
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSF 143
NIL++ E + KI DFGLAKL P + + R G + + APE + + ++DV+SF
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216
Query: 144 GVLVLEIIS 152
GV++ E+ +
Sbjct: 217 GVVLYELFT 225
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 31/232 (13%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL------------DRVLLGATKANIKLNWEKR 55
HPN++ L+G C L EY + +L D A L+ ++
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 115
+A+G+ +L ++ +HRD+ A NIL+ + + KI DFGL++ +
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 116 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL 175
R+ ++A E + T +DV+S+GVL+ EI+S G G L E Q
Sbjct: 202 RLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--LGGTPYCGMTCAELYEKLPQG 257
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 227
++ EKPL D E+ M+ C + RP Q++ L +
Sbjct: 258 YRLEKPLNCDD---------EVYDLMRQ---CWREKPYERPSFAQILVSLNR 297
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ N+ H LV+L G C + ++ EY+ N L L + + ++ ++C +
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L + +HRD+ A N L++ + K+ DFGL++ D+ +
Sbjct: 115 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR 171
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ PE ++ + + K+D+++FGVL+ EI S
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ + +P +V +IG C + +LV E E L++ L + N + + ++
Sbjct: 79 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQ 133
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT- 120
++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + + + G
Sbjct: 134 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 121 -TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
++ V P + L+G C+ T +++ LD V G + LNW C+
Sbjct: 73 MAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CM 126
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAG 119
IAKG+++L + +VHRD+ A N+L+ + KI DFGLA+L D +
Sbjct: 127 QIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
++A E +L + T ++DV+S+GV V E+++
Sbjct: 184 PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + + I
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQI 118
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 119 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW------ 147
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 148 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 264
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 265 Q---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 309
Query: 237 TAPG 240
G
Sbjct: 310 VIQG 313
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW------ 124
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 241
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 242 Q---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 286
Query: 237 TAPG 240
G
Sbjct: 287 VIQG 290
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++H N+V+L R +LV+E+++ + + LL + ++ K + +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK--SFLLQL 109
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
G+A+ H+ ++HRD+K N+L+++E KI DFGLA+ F + T I T
Sbjct: 110 LNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLW 165
Query: 123 YLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
Y AP+ ++G + + D++S G + E+++G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ + +P +V +IG C + +LV E E L++ L + N + + ++
Sbjct: 71 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQ 125
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT- 120
++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + + + G
Sbjct: 126 VSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 121 -TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVEN---NSLDRVLLGATKANIK-LNWEKRSDI 58
L ++HPNLV L+ + R LV+EY ++ + LDR G + +K + W+
Sbjct: 56 LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ----- 110
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ + F H+ + +HRD+K NIL+ + K+ DFG A+L + +A
Sbjct: 111 ---TLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA 164
Query: 119 GTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
T Y +PE ++G Q DV++ G + E++SG
Sbjct: 165 -TRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIK--------LNWEKRSDI 58
H N+V L+G C + G +++ E+ + +L L + L E
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITT 115
+AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 150 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 116 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 207 RLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW----- 125
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 126 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 241
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 242 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 286
Query: 236 LTAPG 240
L G
Sbjct: 287 LVIQG 291
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW------ 125
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 242
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 243 Q---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 287
Query: 237 TAPG 240
G
Sbjct: 288 VIQG 291
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + + I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQI 120
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW------ 128
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 129 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 245
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 246 Q---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 290
Query: 237 TAPG 240
G
Sbjct: 291 VIQG 294
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW------ 129
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 246
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 247 Q---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 291
Query: 237 TAPG 240
G
Sbjct: 292 VIQG 295
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L + +V E Y D ++ + + + I
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQ 129
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ G+ ++H+ +IVHRD+K NILL +++ + KI DFGL+ F N T + RI
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 36/233 (15%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 62
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A+L+ + VHRD+ A N ++ +F KIGDFG+ + +I G G
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKG 192
Query: 123 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 177
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 237
Query: 178 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E+ L+ V D + P N R + C Q + RP +++ +L ++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW----- 129
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 130 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 245
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 246 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 290
Query: 236 LTAPG 240
L G
Sbjct: 291 LVIQG 295
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK---LNWEKRSDIC 59
+ ++HPNLV+L+G C + ++ E++ +L L + + L + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MA 122
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
I+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 123 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK---LNWEKRSDIC 59
+ ++HPNLV+L+G C + ++ E++ +L L + + L + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MA 117
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
I+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ + +P +V +IG C + +LV E E L++ L + N + + ++
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQ 119
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT- 120
++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + + + G
Sbjct: 120 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 121 -TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+V+L LV EY + L+ + K E R+ I +
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR-QIVSAVQ 128
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 127
+ H++ +IVHRD+KA N+LLD + N KI DFG + F + + G+ Y APE
Sbjct: 129 YCHQK---YIVHRDLKAENLLLDGDMNIKIADFGFSNEF--TVGNKLDTFCGSPPYAAPE 183
Query: 128 YVLGGQLTM-KADVYSFGVLVLEIISG 153
G + + DV+S GV++ ++SG
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK---LNWEKRSDIC 59
+ ++HPNLV+L+G C + ++ E++ +L L + + L + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-----MA 117
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
I+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ + +P +V +IG C + +LV E E L++ L + N + + ++
Sbjct: 61 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQ 115
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT- 120
++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + + + G
Sbjct: 116 VSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 121 -TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK---LNWEKRSDIC 59
+ ++HPNLV+L+G C + ++ E++ +L L + + L + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MA 117
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
I+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 118 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 62
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A+L+ + VHRD+ A N ++ +F KIGDFG+ + +I G G
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKG 192
Query: 123 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 177
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 237
Query: 178 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E+ L+ V D + P N R + C Q RP +++ +L ++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L + +V E Y D ++ + + + I
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQ 129
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ G+ ++H+ +IVHRD+K NILL +++ + KI DFGL+ F N T + RI
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ + +P +V +IG C + +LV E E L++ L + N + + ++
Sbjct: 59 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQ 113
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT- 120
++ G+ +L E + VHRD+ A N+LL + KI DFGL+K + + + G
Sbjct: 114 VSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 121 -TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L + +V E Y D ++ + + + I
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQ 129
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ G+ ++H+ +IVHRD+K NILL +++ + KI DFGL+ F N T + RI
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 62
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A+L+ + VHRD+ A N ++ +F KIGDFG+ + +I G G
Sbjct: 137 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKG 189
Query: 123 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 177
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 190 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 234
Query: 178 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E+ L+ V D + P N R + C Q RP +++ +L ++
Sbjct: 235 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 287
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK---LNWEKRSDIC 59
+ ++HPNLV+L+G C + ++ E++ +L L + + L + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MA 115
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
I+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 116 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF 172
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + +P +V +IG C + +LV E E L++ L + N + + ++ +
Sbjct: 424 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQV 478
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-- 120
+ G+ +L E + VHRD+ A N+LL + KI DFGL+K + + + G
Sbjct: 479 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 536 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGA----TKANIKLNWEKRSD------ 57
H N+V L+G C L++EY L L ++ I+ +KR +
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 58 -------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 108
+C +AKG+ FL VHRD+ A N+L+ KI DFGLA+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 109 NITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ ++ A ++APE + G T+K+DV+S+G+L+ EI S
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ + +P +V +IG C + +LV E E L++ L + N + + ++ +
Sbjct: 425 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQV 479
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-- 120
+ G+ +L E + VHRD+ A N+LL + KI DFGL+K + + + G
Sbjct: 480 SMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 537 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIK--SYLFQL 115
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + + I L K +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIK--SYLFQL 113
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 169
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++H N+V+L R +LV+E+++ + + LL + ++ K + +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK--SFLLQL 109
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
G+A+ H+ ++HRD+K N+L+++E KI DFGLA+ F + T + T
Sbjct: 110 LNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLW 165
Query: 123 YLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
Y AP+ ++G + + D++S G + E+++G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++H N+V+L R +LV+E+++ + + LL + ++ K + +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK--SFLLQL 109
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
G+A+ H+ ++HRD+K N+L+++E KI DFGLA+ F + T + T
Sbjct: 110 LNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLW 165
Query: 123 YLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
Y AP+ ++G + + D++S G + E+++G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
LV EY+ + L L + +L+ + I KG+ +L VHRD+ A
Sbjct: 87 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAAR 140
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSF 143
NIL++ E + KI DFGLAKL P + R G + + APE + + ++DV+SF
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 200
Query: 144 GVLVLEIIS 152
GV++ E+ +
Sbjct: 201 GVVLYELFT 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 25/163 (15%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + +++ +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 58 ---ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDN 109
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD
Sbjct: 150 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 207 VRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 26/173 (15%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKAN------------IK 49
L V HP++++L G C Q +L+ EY + SL L + K
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 50 LNWEKRSDICVG--------IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFG 101
L+ + +G I++G+ +L E +VHRD+ A NIL+ + KI DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFG 195
Query: 102 LAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
L++ + +++ R G ++A E + T ++DV+SFGVL+ EI++
Sbjct: 196 LSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------ 132
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 133 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 249
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 250 Q---------------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYL 294
Query: 237 TAPG 240
G
Sbjct: 295 VIQG 298
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ + +P +V +IG C + +LV E E L++ L + N + + ++
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQ 119
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--PDNITHITTRIAG 119
++ G+ +L E + VHRD+ A N+LL + KI DFGL+K +N T
Sbjct: 120 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 170
+ APE + + + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+V+L LV EY + L+ + K E R+ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKF-RQIVSAVQ 127
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 127
+ H++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGSPPYAAPE 182
Query: 128 YVLGGQLTM-KADVYSFGVLVLEIISG 153
G + + DV+S GV++ ++SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIK----------LNWEKRS 56
H N+V L+G C + G +++ E+ + +L L + L E
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 57 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHI 113
+AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 152 XYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 209 DARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW------ 125
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 242
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 243 Q---------------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYL 287
Query: 237 TAPG 240
G
Sbjct: 288 VIQG 291
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW----- 122
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 123 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 239 PQ---------------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRY 283
Query: 236 LTAPG 240
L G
Sbjct: 284 LVIQG 288
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + I L K +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPLPLIK--SYLFQL 112
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
++HP+++EL LV E N ++R L K + + I G
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP---FSENEARHFMHQIITG 124
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYL 124
+ +LH I+HRD+ SN+LL + N KI DFGLA +L + H T + GT Y+
Sbjct: 125 MLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYI 179
Query: 125 APEYVLGGQLTMKADVYSFGVLVLEIISGR 154
+PE +++DV+S G + ++ GR
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C +V EY+ +L L + + + I
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV--VLLYMATQI 139
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 140 SSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK 196
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + ++K+DV++FGVL+ EI +
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
+ P L +L C R V EYV L + + K + I+ GL
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDL----MYHIQQVGKFKEPQAVFYAAEISIGL 133
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR-IAGTTGYLA 125
FLH+ I++RD+K N++LD E + KI DFG+ K + +TTR GT Y+A
Sbjct: 134 FFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIA 188
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGR 154
PE + D +++GVL+ E+++G+
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + I L K +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKTFMDASALTGIPLPLIK--SYLFQL 115
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+V+L LV EY + L+ + K E R+ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKF-RQIVSAVQ 127
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 127
+ H++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPE 182
Query: 128 YVLGGQLTM-KADVYSFGVLVLEIISG 153
G + + DV+S GV++ ++SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+V+L LV EY + L+ + K E R+ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKF-RQIVSAVQ 127
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 127
+ H++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPE 182
Query: 128 YVLGGQLTM-KADVYSFGVLVLEIISG 153
G + + DV+S GV++ ++SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIK--------LNWEKRSDI 58
H N+V L+G C + G +++ E+ + +L L + L E
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITT 115
+AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 150 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 116 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 207 RLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL-LGATKANIKLNWEKRS--- 56
M + ++HPN+V L+G + +++ Y + L L + + +++ + R+
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 57 --------DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFP 107
+ IA G+ +L H+VH+D+ N+L+ + N KI D GL + ++
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + ++APE ++ G+ ++ +D++S+GV++ E+ S
Sbjct: 198 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+V+L LV EY + L+ + K E R+ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKF-RQIVSAVQ 127
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 127
+ H++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPE 182
Query: 128 YVLGGQLTM-KADVYSFGVLVLEIISG 153
G + + DV+S GV++ ++SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+V+L L+ EY + L+ + K E RS I +
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKF-RQIVSAVQ 125
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 127
+ H++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 126 YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDTFCGSPPYAAPE 180
Query: 128 YVLGGQLTM-KADVYSFGVLVLEIISG 153
G + + DV+S GV++ ++SG
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 36/241 (14%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 62
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A+L+ + VHRD+ A N ++ +F KIGDFG+ + +I G G
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGGKG 192
Query: 123 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 177
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 237
Query: 178 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
E+ L+ V D + P N R + C Q RP +++ +L ++ + E+
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 297
Query: 237 T 237
+
Sbjct: 298 S 298
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 58 ---ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDN 109
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD
Sbjct: 148 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 205 VRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW----- 119
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IA+G+ +L + +VHRD+ A N+L+ + KI DFGLAKL
Sbjct: 120 -CVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 235
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 236 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 280
Query: 236 LTAPG 240
L G
Sbjct: 281 LVIQG 285
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 58 ---ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDN 109
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD
Sbjct: 139 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 196 VRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL-LGATKANIKLNWEKRS--- 56
M + ++HPN+V L+G + +++ Y + L L + + +++ + R+
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 57 --------DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFP 107
+ IA G+ +L H+VH+D+ N+L+ + N KI D GL + ++
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ + ++APE ++ G+ ++ +D++S+GV++ E+ S
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 58 ---ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDN 109
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD
Sbjct: 139 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 196 VRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 62
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A+L+ + VHRD+ A N ++ +F KIGDFG+ + +I G G
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKG 192
Query: 123 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 177
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 237
Query: 178 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E+ L+ V D + P N R + C Q RP +++ +L ++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 58 ---ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDN 109
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD
Sbjct: 148 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 205 VRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKAN------------IK 49
L V HP++++L G C Q +L+ EY + SL L + K
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 50 LNWEKRSDICVG--------IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFG 101
L+ + +G I++G+ +L E +VHRD+ A NIL+ + KI DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFG 195
Query: 102 LAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
L++ ++ + + + G ++A E + T ++DV+SFGVL+ EI++
Sbjct: 196 LSR----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 3 LSNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKANIKLNWEKRSD 57
L HPN+V L+ C + R I LV+E+V+ + L L A L E D
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG--LPAETIKD 124
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
+ +GL FLH IVHRD+K NIL+ K+ DFGLA+++ + T +
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPV 179
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFLLEWAWQL 175
T Y APE +L D++S G + E+ + G + Q+ K + +
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK-IFDLIGLP 238
Query: 176 HQEEKPLELVDPELGEYPPN 195
+++ P ++ P G +PP
Sbjct: 239 PEDDWPRDVSLPR-GAFPPR 257
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L +RHP++++L T ++V EY D ++ ++ ++ I
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIV-----EKKRMTEDEGRRFFQQI 117
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + H IVHRD+K N+LLD N KI DFGL+ + D T+ G+
Sbjct: 118 ICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPN 172
Query: 123 YLAPEYVLGGQLTM--KADVYSFGVLVLEIISGR 154
Y APE V+ G+L + DV+S G+++ ++ GR
Sbjct: 173 YAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKAN------------IK 49
L V HP++++L G C Q +L+ EY + SL L + K
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 50 LNWEKRSDICVG--------IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFG 101
L+ + +G I++G+ +L E +VHRD+ A NIL+ + KI DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFG 195
Query: 102 LAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
L++ ++ + + + G ++A E + T ++DV+SFGVL+ EI++
Sbjct: 196 LSR----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 116
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + I L K +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIK--SYLFQL 115
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 62
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A+L+ + VHRD+ A N ++ +F KIGDFG+ + +I G G
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKG 191
Query: 123 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 177
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 192 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 236
Query: 178 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E+ L+ V D + P N R + C Q RP +++ +L ++
Sbjct: 237 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 289
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 31/232 (13%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL------------DRVLLGATKANIKLNWEKR 55
HPN++ L+G C L EY + +L D A L+ ++
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 115
+A+G+ +L ++ +HR++ A NIL+ + + KI DFGL++ +
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 116 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL 175
R+ ++A E + T +DV+S+GVL+ EI+S G G L E Q
Sbjct: 199 RLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--LGGTPYCGMTCAELYEKLPQG 254
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 227
++ EKPL D E+ M+ C + RP Q++ L +
Sbjct: 255 YRLEKPLNCDD---------EVYDLMRQ---CWREKPYERPSFAQILVSLNR 294
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 117
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 116
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+V+L LV EY + L+ + K E R+ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKF-RQIVSAVQ 127
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 127
+ H++ IVHRD+KA N+LLD + N KI DFG + F + G Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPE 182
Query: 128 YVLGGQLTM-KADVYSFGVLVLEIISG 153
G + + DV+S GV++ ++SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 116
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+V+L+ + LV+E++ + L + + I L K +
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIK--SYLFQL 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+GLAF H ++HRD+K N+L++ E K+ DFGLA+ F + + T
Sbjct: 115 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 170
Query: 123 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGR 154
Y APE +LG + A D++S G + E+++ R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 58 ---ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDN 109
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD
Sbjct: 185 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 242 VRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 115
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 117
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 58 ---ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDN 109
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD
Sbjct: 148 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 205 VRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 117
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 117
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 116
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 116
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 117
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 58 ---ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDN 109
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD
Sbjct: 139 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 196 VRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 115
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 115
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 116
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 117 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 115
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 118
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 118
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 8 HPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--------- 57
H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 58 ---ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDN 109
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD
Sbjct: 139 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 196 VRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 118
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 115
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L++V HP +V+L + L+ +++ L + E +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAEL 139
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A GL LH I++RD+K NILLD+E + K+ DFGL+K D+ + GT
Sbjct: 140 ALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVE 195
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
Y+APE V + AD +S+GVL+ E+++G
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+V+L L+ EY + L+ + K E RS I +
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKF-RQIVSAVQ 128
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 127
+ H++ IVHRD+KA N+LLD + N KI DFG + F + G Y APE
Sbjct: 129 YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDAFCGAPPYAAPE 183
Query: 128 YVLGGQLTM-KADVYSFGVLVLEIISG 153
G + + DV+S GV++ ++SG
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW----- 126
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFG AKL
Sbjct: 127 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 242
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 243 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 287
Query: 236 LTAPG 240
L G
Sbjct: 288 LVIQG 292
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR--EHKDNIGSQYLLNW----- 124
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFG AKL
Sbjct: 125 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 240
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 241 PQ---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 285
Query: 236 LTAPG 240
L G
Sbjct: 286 LVIQG 290
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
H N+V+ G +G + L EY L DR+ + +I + + G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGV 117
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 125
+LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 126 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
PE + + + DV+S G+++ +++G
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 324
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HR++ A N L+ + K+ DFGL++L +
Sbjct: 325 SSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 381
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 64
+ H N+V+ G +G + L EY L DR+ + +I + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMA 115
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGY 123
G+ +LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 124 LAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
+APE + + + DV+S G+++ +++G
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 366
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + +L ++ + +HR++ A N L+ + K+ DFGL++L +
Sbjct: 367 SSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 423
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L V HP +V+L + L+ +++ L L + E +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAEL 135
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGT 120
A L LH I++RD+K NILLD+E + K+ DFGL+K ++I H GT
Sbjct: 136 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGT 189
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
Y+APE V T AD +SFGVL+ E+++G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
RHP++++L T +V EYV L + + E R + I +
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE---EMEARR-LFQQILSAV 124
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 126
+ H +V VHRD+K N+LLD N KI DFGL+ + D T+ G+ Y AP
Sbjct: 125 DYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAP 179
Query: 127 EYVLGGQLTM--KADVYSFGVLVLEIISG 153
E V+ G+L + D++S GV++ ++ G
Sbjct: 180 E-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW------ 122
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFG AKL
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 239
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 240 Q---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 284
Query: 237 TAPG 240
G
Sbjct: 285 VIQG 288
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L HPN+V LIG C Q +V E V+ L +L + +
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDA 222
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-T 121
A G+ +L + +HRD+ A N L+ ++ KI DFG+++ D + + +
Sbjct: 223 AAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV 279
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEK 180
+ APE + G+ + ++DV+SFG+L+ E S G + + Q + + EK
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV---------EK 330
Query: 181 PLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
L PEL P+ + R M+ C +RP + + + L ++IR
Sbjct: 331 GGRLPCPELC---PDAVFRLMEQ---CWAYEPGQRPSFSTIYQEL-QSIR 373
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+V+L LV EY + L+ + K E R+ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK---EARAKF-RQIVSAVQ 127
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 127
+ H++ IVHRD+KA N+LLD + N KI DFG + F + G Y APE
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPE 182
Query: 128 YVLGGQLTM-KADVYSFGVLVLEIISG 153
G + + DV+S GV++ ++SG
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + + ++ I
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEI 260
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTT 121
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T T GT
Sbjct: 261 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTP 316
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGTTGYLAPEYVLGGQL 134
I++RD+K NILLD+E + K+ DFGL+K ++I H GT Y+APE V
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 135 TMKADVYSFGVLVLEIISG 153
T AD +SFGVL+ E+++G
Sbjct: 205 TQSADWWSFGVLMFEMLTG 223
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + + ++ I
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEI 257
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTT 121
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T T GT
Sbjct: 258 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTP 313
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 139 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 130 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW------ 129
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFG AKL
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 246
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 247 Q---------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYL 291
Query: 237 TAPG 240
G
Sbjct: 292 VIQG 295
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGTTGYLAPEYVLGGQL 134
I++RD+K NILLD+E + K+ DFGL+K ++I H GT Y+APE V
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 135 TMKADVYSFGVLVLEIISG 153
T AD +SFGVL+ E+++G
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 32/245 (13%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSD 57
+++V +P++ L+G C+ T ++++ LD V K NI LNW
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR--EHKDNIGSQYLLNW----- 124
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFG AKL
Sbjct: 125 -CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 118 AGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQL 175
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 240
Query: 176 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEE 235
Q PP I + C A RP+ ++I +K R +
Sbjct: 241 PQ---------------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRY 285
Query: 236 LTAPG 240
L G
Sbjct: 286 LVIQG 290
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG---I 62
+ HPN+V+L LV EY + L+ W K + I
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-------GWMKEKEARAKFRQI 115
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ + H++ IVHRD+KA N+LLD + N KI DFG + F + G+
Sbjct: 116 VSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPP 170
Query: 123 YLAPEYVLGGQLTM-KADVYSFGVLVLEIISG 153
Y APE G + + DV+S GV++ ++SG
Sbjct: 171 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L HPN+V LIG C Q +V E V+ L +L + +
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDA 222
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-T 121
A G+ +L + +HRD+ A N L+ ++ KI DFG+++ D + + +
Sbjct: 223 AAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV 279
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEK 180
+ APE + G+ + ++DV+SFG+L+ E S G + + Q + + EK
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV---------EK 330
Query: 181 PLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 230
L PEL P+ + R M+ C +RP + + + L ++IR
Sbjct: 331 GGRLPCPELC---PDAVFRLMEQ---CWAYEPGQRPSFSTIYQEL-QSIR 373
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 141 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
RHP++++L T +V EYV L + + E R + I +
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE---EMEARR-LFQQILSAV 124
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 126
+ H +V VHRD+K N+LLD N KI DFGL+ + D G+ Y AP
Sbjct: 125 DYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCGSPNYAAP 179
Query: 127 EYVLGGQLTM--KADVYSFGVLVLEIISG 153
E V+ G+L + D++S GV++ ++ G
Sbjct: 180 E-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGA----TKANIKLNWEKRSDI 58
L++ HPN+V+L+ ++ E+ ++D V+L T++ I++ +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------V 113
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
C L +LH+ I+HRD+KA NIL + + K+ DFG++
Sbjct: 114 CKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI 170
Query: 119 GTTGYLAPEYVL-----GGQLTMKADVYSFGVLVLEI 150
GT ++APE V+ KADV+S G+ ++E+
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T T
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 8 HPNLVELIGCCVQGTRRIL-VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 66
HP L +L CC Q R+ V E+V L + + + + + + I L
Sbjct: 83 HPFLTQLF-CCFQTPDRLFFVMEFVNGGDL----MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGTTGYL 124
FLH++ I++RD+K N+LLD E + K+ DFG+ K + I + T GT Y+
Sbjct: 138 MFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYI 191
Query: 125 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 159
APE + D ++ GVL+ E++ G +A
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ + R L+ E+ L + L + + + + ++ + +A
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELA 124
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L + HE V +HRDIK N+L+ + KI DFG + P + + GT Y
Sbjct: 125 DALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDY 178
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
L PE + G K D++ GVL E + G
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 22/163 (13%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 69
N V+ + + + + EY EN +L ++ N+ ++ + I + L+++
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENRTLYDLI---HSENLNQQRDEYWRLFRQILEALSYI 132
Query: 70 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--------------LFPDNITHITT 115
H + I+HRD+K NI +D+ N KIGDFGLAK P + ++T+
Sbjct: 133 HSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 116 RIAGTTGYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRNSG 157
I GT Y+A E + G G K D+YS G++ E+I ++G
Sbjct: 190 AI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + E+ I
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEI 117
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTT 121
L +LH +V+RDIK N++LD++ + KI DFGL K D T T GT
Sbjct: 118 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTP 172
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ + R L+ E+ L + L + + + + ++ + +A
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELA 125
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L + HE V +HRDIK N+L+ + KI DFG + P + + GT Y
Sbjct: 126 DALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDY 179
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
L PE + G K D++ GVL E + G
Sbjct: 180 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK---LNWEKRSDIC 59
+ ++HPNLV+L+G C + ++ E++ +L L + + L + +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MA 324
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG 119
I+ + +L ++ + +HR++ A N L+ + K+ DFGL++L +
Sbjct: 325 TQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 381
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + E+ I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEI 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTT 121
L +LH +V+RDIK N++LD++ + KI DFGL K D T T GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTP 169
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
S++RHPN++ + R L+ E+ L + L + + + + ++ + +A
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELA 124
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L + HE V +HRDIK N+L+ + KI DFG + P + + GT Y
Sbjct: 125 DALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDY 178
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
L PE + G K D++ GVL E + G
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 32/244 (13%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDI 58
+++V +P++ L+G C+ T +++ LD V K NI LNW
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR--EHKDNIGSQYLLNW------ 124
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
CV IAKG+ +L + +VHRD+ A N+L+ + KI DFG AKL
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 119 GT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLH 176
++A E +L T ++DV+S+GV V E+++ G + +LE +L
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 241
Query: 177 QEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEEL 236
Q PP I + C A RP+ ++I +K R + L
Sbjct: 242 Q---------------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYL 286
Query: 237 TAPG 240
G
Sbjct: 287 VIQG 290
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
+ V I K L +L E+ ++HRD+K SNILLD+ K+ DFG++ D+ R
Sbjct: 129 MTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--KAKDRS 184
Query: 118 AGTTGYLAPEYVLGGQLT-----MKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWA 172
AG Y+APE + T ++ADV+S G+ ++E+ +G+ K K E
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC-----KTDFEVL 239
Query: 173 WQLHQEEKPL 182
++ QEE PL
Sbjct: 240 TKVLQEEPPL 249
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + E+ I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEI 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTT 121
L +LH +V+RDIK N++LD++ + KI DFGL K D T T GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTP 169
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 22/163 (13%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 69
N V+ + + + + EY EN +L ++ N+ ++ + I + L+++
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENGTLYDLI---HSENLNQQRDEYWRLFRQILEALSYI 132
Query: 70 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--------------LFPDNITHITT 115
H + I+HRD+K NI +D+ N KIGDFGLAK P + ++T+
Sbjct: 133 HSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 116 RIAGTTGYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRNSG 157
I GT Y+A E + G G K D+YS G++ E+I ++G
Sbjct: 190 AI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDI 58
L +++H N++ L+ T E + L L+GA NI KL + +
Sbjct: 104 LKHMKHENVIGLLDVFTPATS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 159
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRI 117
I +GL ++H I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR
Sbjct: 160 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 215
Query: 118 AGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE +L M D++S G ++ E+++GR
Sbjct: 216 ----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 36/233 (15%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 62
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A+L+ + VHR++ A N ++ +F KIGDFG+ + +I G G
Sbjct: 141 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKG 193
Query: 123 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 177
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 194 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 238
Query: 178 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E+ L+ V D + P N R + C Q + RP +++ +L ++
Sbjct: 239 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 24/159 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGA----TKANIKLNWEKRSDI 58
L++ HPN+V+L+ ++ E+ ++D V+L T++ I++ +
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------V 140
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
C L +LH+ I+HRD+KA NIL + + K+ DFG++ N I R +
Sbjct: 141 CKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDS 194
Query: 119 --GTTGYLAPEYVL-----GGQLTMKADVYSFGVLVLEI 150
GT ++APE V+ KADV+S G+ ++E+
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGA----TKANIKLNWEKRSDI 58
L++ HPN+V+L+ ++ E+ ++D V+L T++ I++ +
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------V 140
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
C L +LH+ I+HRD+KA NIL + + K+ DFG++ I + I
Sbjct: 141 CKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI- 196
Query: 119 GTTGYLAPEYVL-----GGQLTMKADVYSFGVLVLEI 150
GT ++APE V+ KADV+S G+ ++E+
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 25 ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKA 84
+L EY E L R L + L + I+ L +LHE I+HRD+K
Sbjct: 95 LLAMEYCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKP 150
Query: 85 SNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVY 141
NI+L Q KI D G AK + + T GT YLAPE + + T+ D +
Sbjct: 151 ENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYW 208
Query: 142 SFGVLVLEIISG 153
SFG L E I+G
Sbjct: 209 SFGTLAFECITG 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + E+ I
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEI 119
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--RIAGT 120
L +LH +V+RDIK N++LD++ + KI DFGL K + I+ T GT
Sbjct: 120 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGT 173
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + E+ I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEI 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--RIAGT 120
L +LH +V+RDIK N++LD++ + KI DFGL K + I+ T GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGT 168
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 36/233 (15%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 62
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
A G+A+L+ + VHR++ A N ++ +F KIGDFG+ + +I G G
Sbjct: 140 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKG 192
Query: 123 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 177
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 237
Query: 178 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 229
E+ L+ V D + P N R + C Q + RP +++ +L ++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
++ +RH NLV+L+G V+ + +V EY+ SL L ++ L + +
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLD 110
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ + + +L + VHRD+ A N+L+ ++ K+ DFGL K + T T ++
Sbjct: 111 VCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--V 163
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + + K+DV+SFG+L+ EI S
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 25 ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKA 84
+L EY E L R L + L + I+ L +LHE I+HRD+K
Sbjct: 94 LLAMEYCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKP 149
Query: 85 SNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVY 141
NI+L Q KI D G AK + + T GT YLAPE + + T+ D +
Sbjct: 150 ENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYW 207
Query: 142 SFGVLVLEIISG 153
SFG L E I+G
Sbjct: 208 SFGTLAFECITG 219
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
++ +RH NLV+L+G V+ + +V EY+ SL L ++ L + +
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLD 125
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ + + +L + VHRD+ A N+L+ ++ K+ DFGL K + T T ++
Sbjct: 126 VCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--V 178
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + + K+DV+SFG+L+ EI S
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 24/159 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGA----TKANIKLNWEKRSDI 58
L++ HPN+V+L+ ++ E+ ++D V+L T++ I++ +
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------V 140
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR-- 116
C L +LH+ I+HRD+KA NIL + + K+ DFG++ N I R
Sbjct: 141 CKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDX 194
Query: 117 IAGTTGYLAPEYVL-----GGQLTMKADVYSFGVLVLEI 150
GT ++APE V+ KADV+S G+ ++E+
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDI 58
N H +V L+G QG +++ E + L R L A N L + K +
Sbjct: 86 NCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 143
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 144 AGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRK 196
Query: 119 GTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + E+ I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEI 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--RIAGT 120
L +LH +V+RDIK N++LD++ + KI DFGL K + I+ T GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGT 168
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 9 PNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGL 66
P L +L C R V EYV L + +G K + + IA GL
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAEIAIGL 134
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI-THITTR-IAGTTGYL 124
FL + I++RD+K N++LD E + KI DFG+ K +NI +TT+ GT Y+
Sbjct: 135 FFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYI 188
Query: 125 APEYVLGGQLTMKADVYSFGVLVLEIISGR 154
APE + D ++FGVL+ E+++G+
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + E+ I
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEI 114
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--RIAGT 120
L +LH +V+RDIK N++LD++ + KI DFGL K + I+ T GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGT 168
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
++ +RH NLV+L+G V+ + +V EY+ SL L ++ L + +
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLD 116
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ + + +L + VHRD+ A N+L+ ++ K+ DFGL K + T T ++
Sbjct: 117 VCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PV 169
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + K+DV+SFG+L+ EI S
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 3 LSNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKANIKLNWEKRSD 57
L HPN+V L+ C + R I LV+E+V+ + L L A L E D
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG--LPAETIKD 116
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
+ +GL FLH IVHRD+K NIL+ K+ DFGLA+++ + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFLLEWAWQL 175
T Y APE +L D++S G + E+ + G + Q+ K + +
Sbjct: 174 --TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK-IFDLIGLP 230
Query: 176 HQEEKPLELVDPELGEYPPN 195
+++ P ++ P G +PP
Sbjct: 231 PEDDWPRDVSLPR-GAFPPR 249
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 64
+++H N+V+ +G + + E V SL LL + +K N + I +
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILE 133
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGY 123
GL +LH+ IVHRDIK N+L++ KI DFG +K I T GT Y
Sbjct: 134 GLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQY 189
Query: 124 LAPEYVLGG--QLTMKADVYSFGVLVLEIISGR 154
+APE + G AD++S G ++E+ +G+
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L C + Y +N L + + +G+ +
Sbjct: 91 MSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 144
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 145 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 3 LSNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKANIKLNWEKRSD 57
L HPN+V L+ C + R I LV+E+V+ + L L A L E D
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG--LPAETIKD 116
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
+ +GL FLH IVHRD+K NIL+ K+ DFGLA+++ + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPV 171
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFLLEWAWQL 175
T Y APE +L D++S G + E+ + G + Q+ K + +
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK-IFDLIGLP 230
Query: 176 HQEEKPLELVDPELGEYPPN 195
+++ P ++ P G +PP
Sbjct: 231 PEDDWPRDVSLPR-GAFPPR 249
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
++ +RH NLV+L+G V+ + +V EY+ SL L ++ L + +
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLD 297
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ + + +L + VHRD+ A N+L+ ++ K+ DFGL K + T T ++
Sbjct: 298 VCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--V 350
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+ APE + + + K+DV+SFG+L+ EI S
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 64
+++H N+V+ +G + + E V SL LL + +K N + I +
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILE 119
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGY 123
GL +LH+ IVHRDIK N+L++ KI DFG +K I T GT Y
Sbjct: 120 GLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQY 175
Query: 124 LAPEYVLGG--QLTMKADVYSFGVLVLEIISGR 154
+APE + G AD++S G ++E+ +G+
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDICVGIA 63
++V L+G QG +++ E + L R L A N L + K + IA
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG- 122
G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I G G
Sbjct: 139 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGL 191
Query: 123 ----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+++PE + G T +DV+SFGV++ EI +
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 9 PNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGL 66
P L +L C R V EYV L + +G K + + IA GL
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAEIAIGL 455
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI-THITTR-IAGTTGYL 124
FL + I++RD+K N++LD E + KI DFG+ K +NI +TT+ GT Y+
Sbjct: 456 FFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYI 509
Query: 125 APEYVLGGQLTMKADVYSFGVLVLEIISGR 154
APE + D ++FGVL+ E+++G+
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 58 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 112
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 201 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 113 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 258 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S + H N+V IG +Q R ++ E + L L + + D
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 160 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 212
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 58 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 112
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 203 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 113 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 260 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL------DRVLLGATKANIKLNWEKRS 56
L NV+HP LV L + V +Y+ L +R L E R+
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL-----------EPRA 141
Query: 57 DICVG-IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--I 113
IA L +LH +IV+RD+K NILLD + + + DFGL K +NI H
Sbjct: 142 RFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNST 195
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG------RNSGKAMWGQMNK 166
T+ GT YLAPE + D + G ++ E++ G RN+ + +NK
Sbjct: 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S + H N+V IG +Q R ++ E + L L + + D
Sbjct: 86 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 146 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 198
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 58 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 112
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 196 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 113 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 253 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDICVGIA 63
++V L+G QG +++ E + L R L + N L + K + IA
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG- 122
G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I G G
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGL 186
Query: 123 ----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+++PE + G T +DV+SFGV++ EI +
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 3 LSNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKANIKLNWEKRSD 57
L HPN+V L+ C + R I LV+E+V+ + L L A L E D
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG--LPAETIKD 116
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
+ +GL FLH IVHRD+K NIL+ K+ DFGLA+++ + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPV 171
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
T Y APE +L D++S G + E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 58 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 112
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 194 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 113 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 251 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L V+HP +V+LI G + L+ EY+ L + + I + + I
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAEI 130
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ L LH++ I++RD+K NI+L+ + + K+ DFGL K + T +T GT
Sbjct: 131 SMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIE 186
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
Y+APE ++ D +S G L+ ++++G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L V+HP +V+LI G + L+ EY+ L + + I + + I
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAEI 130
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
+ L LH++ I++RD+K NI+L+ + + K+ DFGL K + T +T GT
Sbjct: 131 SMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIE 186
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
Y+APE ++ D +S G L+ ++++G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 172 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 224
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 225 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIA 118
+A+G+ FL +HRD+ A NILL + KI DFGLA+ PD + TR+
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
++APE + + K+DV+S+GVL+ EI S
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 145 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 197
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDI 58
N H +V L+G QG +++ E + L R L + N L + K +
Sbjct: 80 NCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 138 AGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRK 190
Query: 119 GTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 30/229 (13%)
Query: 1 MTLSNVRHPNLVELIGCCV--QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 58
+ + + HPN++ LIG + +G +L+ + L + +K
Sbjct: 74 LLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVK----DLISF 129
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN-----ITHI 113
+ +A+G+ +L E+ VHRD+ A N +LD+ F K+ DFGLA+ D H
Sbjct: 130 GLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR 186
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAW 173
R+ + A E + + T K+DV+SFGVL+ E+++ G + ++ F L
Sbjct: 187 HARLP--VKWTALESLQTYRFTTKSDVWSFGVLLWELLT---RGAPPYRHIDPFDLT--- 238
Query: 174 QLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVI 222
H + L P EY P+ + + M+ C +A + RP ++
Sbjct: 239 --HFLAQGRRLPQP---EYCPDSLYQVMQQ---CWEADPAVRPTFRVLV 279
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
T+S +RHP LV L +++YE++ L + K++ ++ +
Sbjct: 101 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQ 157
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGL-AKLFPDNITHITTRIA 118
+ KGL +HE + VH D+K NI+ + + K+ DFGL A L P +TT
Sbjct: 158 VCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 211
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT + APE G + D++S GVL ++SG
Sbjct: 212 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 145 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 197
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 17/175 (9%)
Query: 3 LSNVRHPNLVE----LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 58
L RH N++ L ++ R + + + + L ++L +N + +
Sbjct: 95 LLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----F 149
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTR 116
I +GL ++H +++HRD+K SN+L++ + KI DFGLA++ H T
Sbjct: 150 LYQILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTE 206
Query: 117 IAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 207 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 160 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 212
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 160 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 212
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 77 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 136
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 137 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 189
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 190 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 146 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 198
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 161
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 162 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 214
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 215 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + + ++ I
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEI 118
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTT 121
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T GT
Sbjct: 119 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTP 174
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + + ++ I
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEI 119
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTT 121
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T GT
Sbjct: 120 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTP 175
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L N RHP L L R V EY L ++ + + ++ I
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEI 117
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTT 121
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T GT
Sbjct: 118 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTP 173
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
YLAPE + D + GV++ E++ GR
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
T+S +RHP LV L +++YE++ L + K++ ++ +
Sbjct: 207 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQ 263
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGL-AKLFPDNITHITTRIA 118
+ KGL +HE + VH D+K NI+ + + K+ DFGL A L P +TT
Sbjct: 264 VCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 317
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT + APE G + D++S GVL ++SG
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 92 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 151
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 152 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAS 204
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 205 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L + HPN+++ ++ +V E + L R++ K + V +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
L +H ++HRDIK +N+ + K+GD GL + F T + + GT
Sbjct: 146 CSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPY 201
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
Y++PE + K+D++S G L+ E+ +
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAG 119
I +GL ++H +++HRD+K SN+LL+ + KI DFGLA++ PD + T
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 120 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
T Y APE +L + T D++S G ++ E++S R GK Q+N L
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L N+RH ++ +L + +V EY L ++ + L+ E+ +
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR----LSEEETRVVFRQ 116
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I +A++H + HRD+K N+L D+ K+ DFGL N + G+
Sbjct: 117 IVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSL 173
Query: 122 GYLAPEYVLG-GQLTMKADVYSFGVLVLEIISG 153
Y APE + G L +ADV+S G+L+ ++ G
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 146 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQ---DIYRAS 198
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 185
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 186 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAG 238
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 239 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDI 58
N H +V L+G QG +++ E + L R L + N L + K +
Sbjct: 86 NCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 143
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 144 AGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRK 196
Query: 119 GTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+T+ HP++V+LIG + I++ E L R L K ++ L S I
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILY 116
Query: 61 G--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + ++
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
++APE + + T +DV+ FGV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+T+ HP++V+LIG + I++ E L R L K ++ L S I
Sbjct: 60 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILY 113
Query: 61 G--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + ++
Sbjct: 114 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 170
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
++APE + + T +DV+ FGV + EI+
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD--- 57
+ +S H N+V IG +Q R ++ E + L L + + D
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 162
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHI 113
+ IA G +L E H +HRDI A N LL P KIGDFG+A+ D
Sbjct: 163 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAG 215
Query: 114 TTRIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
R G ++ PE + G T K D +SFGVL+ EI S
Sbjct: 216 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+T+ HP++V+LIG + I++ E L R L K ++ L S I
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILY 116
Query: 61 G--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + ++
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
++APE + + T +DV+ FGV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+T+ HP++V+LIG + I++ E L R L K ++ L S I
Sbjct: 91 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILY 144
Query: 61 G--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + ++
Sbjct: 145 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
++APE + + T +DV+ FGV + EI+
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL---GGQ 133
I+HRD+K NILLD+ + I DF +A + P T ITT +AGT Y+APE G
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT-MAGTKPYMAPEMFSSRKGAG 193
Query: 134 LTMKADVYSFGVLVLEIISGR 154
+ D +S GV E++ GR
Sbjct: 194 YSFAVDWWSLGVTAYELLRGR 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+T+ HP++V+LIG + I++ E L R L K ++ L S I
Sbjct: 65 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILY 118
Query: 61 G--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + ++
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
++APE + + T +DV+ FGV + EI+
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+T+ HP++V+LIG + I++ E L R L K ++ L S I
Sbjct: 66 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILY 119
Query: 61 G--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + ++
Sbjct: 120 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
++APE + + T +DV+ FGV + EI+
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDICVGIA 63
++V L+G QG +++ E + L R L + N L + K + IA
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG- 122
G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I G G
Sbjct: 140 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGL 192
Query: 123 ----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+++PE + G T +DV+SFGV++ EI +
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+T+ HP++V+LIG + I++ E L R L K ++ L S I
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILY 121
Query: 61 G--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + ++
Sbjct: 122 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
++APE + + T +DV+ FGV + EI+
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDI 58
N H +V L+G QG +++ E + L R L + N L + K +
Sbjct: 79 NCHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 137 AGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRK 189
Query: 119 GTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDICVGIA 63
++V L+G QG +++ E + L R L + N L + K + IA
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG- 122
G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I G G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGL 188
Query: 123 ----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+++PE + G T +DV+SFGV++ EI +
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDICVGIA 63
++V L+G QG +++ E + L R L + N L + K + IA
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG- 122
G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I G G
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGL 194
Query: 123 ----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+++PE + G T +DV+SFGV++ EI +
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL-----GATKANIKLNWEKRS 56
+S HPN+V V LV + + S+ ++ G K+ + L+ +
Sbjct: 66 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV-LDESTIA 124
Query: 57 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP--DNITHIT 114
I + +GL +LH+ +HRD+KA NILL ++ + +I DFG++ +IT
Sbjct: 125 TILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 181
Query: 115 TR--IAGTTGYLAPEY---VLGGQLTMKADVYSFGVLVLEIISG 153
R GT ++APE V G KAD++SFG+ +E+ +G
Sbjct: 182 VRKTFVGTPCWMAPEVMEQVRG--YDFKADIWSFGITAIELATG 223
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDICVGIA 63
++V L+G QG +++ E + L R L + N L + K + IA
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG- 122
G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I G G
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGL 195
Query: 123 ----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+++PE + G T +DV+SFGV++ EI +
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+T+ HP++V+LIG + I++ E L R L K ++ L S I
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKFSLDLA----SLILY 116
Query: 61 G--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + ++
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
++APE + + T +DV+ FGV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL-----GATKANIKLNWEKRS 56
+S HPN+V V LV + + S+ ++ G K+ + L+ +
Sbjct: 61 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV-LDESTIA 119
Query: 57 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP--DNITHIT 114
I + +GL +LH+ +HRD+KA NILL ++ + +I DFG++ +IT
Sbjct: 120 TILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 115 TR--IAGTTGYLAPEY---VLGGQLTMKADVYSFGVLVLEIISG 153
R GT ++APE V G KAD++SFG+ +E+ +G
Sbjct: 177 VRKTFVGTPCWMAPEVMEQVRG--YDFKADIWSFGITAIELATG 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI---KLNWEKRSD 57
+T+ HP++V+LIG + I+ ++ LG ++ + K + + S
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASL 493
Query: 58 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 115
I ++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + +
Sbjct: 494 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 550
Query: 116 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
+ ++APE + + T +DV+ FGV + EI+
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 34/171 (19%)
Query: 8 HPNLVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
H N+V L+ R LV++Y+E + L +ANI L + + + K
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETD-----LHAVIRANI-LEPVHKQYVVYQLIKV 121
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI-------- 117
+ +LH ++HRD+K SNILL+ E + K+ DFGL++ F NI +T I
Sbjct: 122 IKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFV-NIRRVTNNIPLSINENT 177
Query: 118 -------------AGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
T Y APE +LG + T D++S G ++ EI+ G+
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 3 LSNVRHPNLVELIGC---CVQGTRRI-LVYEYVENNSLDRVLLGATKANIKL--NWEKRS 56
L ++HPN+V V+G + I LV E + +L L IK+ +W
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW---- 134
Query: 57 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITT 115
C I KGL FLH P I+HRD+K NI + KIGD GLA L
Sbjct: 135 --CRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAK 188
Query: 116 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLE 149
+ GT + APE + DVY+FG LE
Sbjct: 189 AVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLE 221
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDICVGIA 63
++V L+G QG +++ E + L R L + N L + K + IA
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG- 122
G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I G G
Sbjct: 171 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGL 223
Query: 123 ----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+++PE + G T +DV+SFGV++ EI +
Sbjct: 224 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
I V I K L LH +L ++HRD+K SN+L++ K+ DFG++ D++ T
Sbjct: 158 IAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK--TID 213
Query: 118 AGTTGYLAPEYV---LGGQ-LTMKADVYSFGVLVLEIISGR---NSGKAMWGQMNKFLLE 170
AG Y+APE + L + ++K+D++S G+ ++E+ R +S + Q+ + + E
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273
Query: 171 WAWQLHQEEKPLELVD 186
+ QL ++ E VD
Sbjct: 274 PSPQLPADKFSAEFVD 289
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 6 VRHPNLVELIGCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+RH N++ I + T+ LV +Y E+ SL L T + E + +
Sbjct: 55 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALS 109
Query: 62 IAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHI 113
A GLA LH E+V P I HRD+K+ NIL+ + I D GLA D I
Sbjct: 110 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 169
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMK-------ADVYSFGVLVLEI 150
GT Y+APE VL + MK AD+Y+ G++ EI
Sbjct: 170 PNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+T+ HP++V+LIG + I++ E L R L K ++ L S I
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKFSLDLA----SLILY 116
Query: 61 G--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ ++
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
++APE + + T +DV+ FGV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 6 VRHPNLVELIGCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+RH N++ I + T+ LV +Y E+ SL L T + E + +
Sbjct: 93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALS 147
Query: 62 IAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHI 113
A GLA LH E+V P I HRD+K+ NIL+ + I D GLA D I
Sbjct: 148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 207
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMK-------ADVYSFGVLVLEI 150
GT Y+APE VL + MK AD+Y+ G++ EI
Sbjct: 208 PNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 6 VRHPNLVELIGCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+RH N++ I + T+ LV +Y E+ SL L T + E + +
Sbjct: 60 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALS 114
Query: 62 IAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHI 113
A GLA LH E+V P I HRD+K+ NIL+ + I D GLA D I
Sbjct: 115 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 174
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMK-------ADVYSFGVLVLEI 150
GT Y+APE VL + MK AD+Y+ G++ EI
Sbjct: 175 PNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 6 VRHPNLVELIGCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+RH N++ I + T+ LV +Y E+ SL L T + E + +
Sbjct: 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALS 108
Query: 62 IAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHI 113
A GLA LH E+V P I HRD+K+ NIL+ + I D GLA D I
Sbjct: 109 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 168
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMK-------ADVYSFGVLVLEI 150
GT Y+APE VL + MK AD+Y+ G++ EI
Sbjct: 169 PNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 6 VRHPNLVELIGCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+RH N++ I + T+ LV +Y E+ SL L T + E + +
Sbjct: 80 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALS 134
Query: 62 IAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHI 113
A GLA LH E+V P I HRD+K+ NIL+ + I D GLA D I
Sbjct: 135 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 194
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMK-------ADVYSFGVLVLEI 150
GT Y+APE VL + MK AD+Y+ G++ EI
Sbjct: 195 PNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
HPN+++L LV E + L D ++ +K N + I + G+
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII-----HRMKFNEVDAAVIIKQVLSGV 149
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGY 123
+LH+ +IVHRD+K N+LL+ + KI DFGL+ +F +N + R+ GT Y
Sbjct: 150 TYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYY 204
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+APE VL + K DV+S GV++ +++G
Sbjct: 205 IAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI---KLNWEKRSD 57
+T+ HP++V+LIG + I+ ++ LG ++ + K + + S
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASL 493
Query: 58 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 115
I ++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + +
Sbjct: 494 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS 550
Query: 116 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
+ ++APE + + T +DV+ FGV + EI+
Sbjct: 551 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 6 VRHPNLVELIGCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+RH N++ I + T+ LV +Y E+ SL L T + E + +
Sbjct: 57 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALS 111
Query: 62 IAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHI 113
A GLA LH E+V P I HRD+K+ NIL+ + I D GLA D I
Sbjct: 112 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 171
Query: 114 TTRIAGTTGYLAPEYVLGGQLTMK-------ADVYSFGVLVLEI 150
GT Y+APE VL + MK AD+Y+ G++ EI
Sbjct: 172 PNHRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L T LV E V L DR++ + +D
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE-----RDAADAVKQ 156
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQ---EFNPKIGDFGLAKLFPDNITHITTRIA 118
I + +A+LHE IVHRD+K N+L + KI DFGL+K+ + T +
Sbjct: 157 ILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VC 211
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT GY APE + G + D++S G++ ++ G
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV 60
L ++HPN+V L G L+ + V L DR++ S +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-----RDASRLIF 123
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNIL---LDQEFNPKIGDFGLAKLFPDNITHITTRI 117
+ + +LH+ IVHRD+K N+L LD++ I DFGL+K+ ++ + +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT GY+APE + + D +S GV+ ++ G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWEKRSDICVGIA 63
++V L+G QG +++ E + L R L + N L + K + IA
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG- 122
G+A+L+ VHRD+ A N + ++F KIGDFG+ + +I G G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGL 188
Query: 123 ----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+++PE + G T +DV+SFGV++ EI +
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG 61
L ++HPN+V L G L+ + V L DR++ S +
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-----RDASRLIFQ 124
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNIL---LDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ + +LH+ IVHRD+K N+L LD++ I DFGL+K+ ++ + +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTAC 179
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT GY+APE + + D +S GV+ ++ G
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 69
N V+ + + + EY EN +L ++ N+ ++ + I + L+++
Sbjct: 76 NFVKPXTAVKKKSTLFIQXEYCENRTLYDLI---HSENLNQQRDEYWRLFRQILEALSYI 132
Query: 70 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--------------LFPDNITHITT 115
H + I+HR++K NI +D+ N KIGDFGLAK P + ++T+
Sbjct: 133 HSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 116 RIAGTTGYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRNSG 157
I GT Y+A E + G G K D YS G++ E I ++G
Sbjct: 190 AI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTG 231
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV 60
L ++HPN+V L G L+ + V L DR++ S +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-----RDASRLIF 123
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNIL---LDQEFNPKIGDFGLAKLFPDNITHITTRI 117
+ + +LH+ IVHRD+K N+L LD++ I DFGL+K+ ++ + +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT GY+APE + + D +S GV+ ++ G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV 60
L ++HPN+V L G L+ + V L DR++ S +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-----RDASRLIF 123
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNIL---LDQEFNPKIGDFGLAKLFPDNITHITTRI 117
+ + +LH+ IVHRD+K N+L LD++ I DFGL+K+ ++ + +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT GY+APE + + D +S GV+ ++ G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 27/148 (18%)
Query: 25 ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL------VPHIV 78
+LV EY N SL + L T +W + + +GLA+LH EL P I
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAIS 142
Query: 79 HRDIKASNILLDQEFNPKIGDFGLAKLF-------PDNITHITTRIAGTTGYLAPEYVLG 131
HRD+ + N+L+ + I DFGL+ P + GT Y+APE VL
Sbjct: 143 HRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLE 201
Query: 132 GQLTMK--------ADVYSFGVLVLEII 151
G + ++ D+Y+ G++ EI
Sbjct: 202 GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFY------TA 139
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + + +D+++ G ++ ++++G
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
I V I K L LH +L ++HRD+K SN+L++ K+ DFG++ D++
Sbjct: 114 IAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-- 169
Query: 118 AGTTGYLAPEYV---LGGQ-LTMKADVYSFGVLVLEIISGRNSGKAMWG----QMNKFLL 169
AG Y+APE + L + ++K+D++S G+ ++E+ R + WG Q+ + +
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-WGTPFQQLKQVVE 228
Query: 170 EWAWQLHQEEKPLELVD 186
E + QL ++ E VD
Sbjct: 229 EPSPQLPADKFSAEFVD 245
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 124
GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT GY+
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 125 APEYVLGG-QLTMKADVYSFGVLVLEIISGRN 155
APE + G AD +S G ++ +++ G +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 124
GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT GY+
Sbjct: 303 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 356
Query: 125 APEYVLGG-QLTMKADVYSFGVLVLEIISGRN 155
APE + G AD +S G ++ +++ G +
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 388
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 124
GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT GY+
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 125 APEYVLGG-QLTMKADVYSFGVLVLEIISGRN 155
APE + G AD +S G ++ +++ G +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 124
GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT GY+
Sbjct: 304 GLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 125 APEYVLGG-QLTMKADVYSFGVLVLEIISGRN 155
APE + G AD +S G ++ +++ G +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
LV E+ S+ ++ +K W + IC I +GL+ LH+ V +HRDIK
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEW--IAYICREILRGLSHLHQHKV---IHRDIKGQ 158
Query: 86 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ-----LTMKADV 140
N+LL + K+ DFG++ + T I GT ++APE + + K+D+
Sbjct: 159 NVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDL 217
Query: 141 YSFGVLVLEIISG 153
+S G+ +E+ G
Sbjct: 218 WSLGITAIEMAEG 230
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 31/163 (19%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++H N++EL R L++EY EN ++K +K D+ + +
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAEN-------------DLKKYMDKNPDVSMRV 133
Query: 63 AK--------GLAFLHEELVPHIVHRDIKASNILL---DQEFNP--KIGDFGLAKLFPDN 109
K G+ F H +HRD+K N+LL D P KIGDFGLA+ F
Sbjct: 134 IKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190
Query: 110 ITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 151
I T I T Y PE +LG + + D++S + E++
Sbjct: 191 IRQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 115 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 171
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 172 KILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 154 R 154
R
Sbjct: 227 R 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDI 58
L +++H N++ L+ R L E + L L+GA NI KL + +
Sbjct: 75 LKHMKHENVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRI 117
I +GL ++H I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 186
Query: 118 AGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE +L D++S G ++ E+++GR
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 115 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 171
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 172 KILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 154 R 154
R
Sbjct: 227 R 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 113 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXEL 169
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 170 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 154 R 154
R
Sbjct: 225 R 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDI 58
L +++H N++ L+ R L E + L L+GA NI KL + +
Sbjct: 86 LKHMKHENVIGLLDVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRI 117
I +GL ++H I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR
Sbjct: 142 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 197
Query: 118 AGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE +L D++S G ++ E+++GR
Sbjct: 198 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 113 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXEL 169
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 170 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 154 R 154
R
Sbjct: 225 R 225
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 116
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 117 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 117
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 118 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I KG+ ++H + ++HRD+K SNI L KIGDFGL ++ TR GT
Sbjct: 145 ITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--TRSKGTL 199
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
Y++PE + + D+Y+ G+++ E++
Sbjct: 200 RYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 115 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 171
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 172 KILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 154 R 154
R
Sbjct: 227 R 227
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 115
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 116 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 115 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 171
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 172 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
Query: 154 R 154
R
Sbjct: 227 R 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 113 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 169
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 170 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 154 R 154
R
Sbjct: 225 R 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 107 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 163
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 164 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
Query: 154 R 154
R
Sbjct: 219 R 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 114
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 115 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 114 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 170
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 171 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 154 R 154
R
Sbjct: 226 R 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 110 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 166
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 167 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 154 R 154
R
Sbjct: 222 R 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 110 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 166
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 167 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 154 R 154
R
Sbjct: 222 R 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 120 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 176
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 177 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 154 R 154
R
Sbjct: 232 R 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 114 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSEL 170
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 171 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 154 R 154
R
Sbjct: 226 R 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 120 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 176
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 177 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 154 R 154
R
Sbjct: 232 R 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 119 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 175
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 176 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
Query: 154 R 154
R
Sbjct: 231 R 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 118 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 174
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 175 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
Query: 154 R 154
R
Sbjct: 230 R 230
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 136
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 137 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 120 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 176
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 177 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
Query: 154 R 154
R
Sbjct: 232 R 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 113 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 169
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 170 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
Query: 154 R 154
R
Sbjct: 225 R 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL------------ 105
I + IA+ + FLH + ++HRD+K SNI + K+GDFGL
Sbjct: 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 106 -FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
P TH GT Y++PE + G + K D++S G+++ E++
Sbjct: 226 PMPAYATHXGQ--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 140
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 141 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 110 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 166
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 167 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 154 R 154
R
Sbjct: 222 R 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 110 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSEL 166
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 167 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
Query: 154 R 154
R
Sbjct: 222 R 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 114 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 170
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 171 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 154 R 154
R
Sbjct: 226 R 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 131 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 187
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 188 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
Query: 154 R 154
R
Sbjct: 243 R 243
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 47 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF 106
+++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 120 HMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
Query: 107 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
N + T T Y APE +LG D++S G ++ E++ G
Sbjct: 177 CTNF--MMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 105 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 161
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 162 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
Query: 154 R 154
R
Sbjct: 217 R 217
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 139
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 137
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 138 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 128 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 184
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 185 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 154 R 154
R
Sbjct: 240 R 240
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 137
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 138 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 104 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 160
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 161 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
Query: 154 R 154
R
Sbjct: 216 R 216
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 137
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 138 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 127 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 183
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 184 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 154 R 154
R
Sbjct: 239 R 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 140
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 141 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 104 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 160
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 161 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
Query: 154 R 154
R
Sbjct: 216 R 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 128 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 184
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 185 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
Query: 154 R 154
R
Sbjct: 240 R 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 106 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 162
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 163 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
Query: 154 R 154
R
Sbjct: 218 R 218
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 114 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 170
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 171 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
Query: 154 R 154
R
Sbjct: 226 R 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 105 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 161
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 162 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
Query: 154 R 154
R
Sbjct: 217 R 217
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 136
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 137 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 127 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 183
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 184 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
Query: 154 R 154
R
Sbjct: 239 R 239
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 139
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 139
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 121
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 122 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 142
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 143 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 137
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 138 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L V HPN++ L T +L+ E V L L A K + L+ E+ + I
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L + P K+ DFGLA D + I
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 104 LMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 160
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 161 KILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
Query: 154 R 154
R
Sbjct: 216 R 216
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 139
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICV 60
+S + HP V+L + Y +N L + + +G+ +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TA 139
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 119
I L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ G
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y++PE + +D+++ G ++ ++++G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
M + + P +V L G +G + E +E SL +++ K L E R+ +
Sbjct: 118 MACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLP-EDRALYYL 172
Query: 61 GIA-KGLAFLHEELVPHIVHRDIKASNILLDQE-FNPKIGDFGLA-KLFPDNITH---IT 114
G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 173 GQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
I GT ++APE VLG K DV+S ++L +++G
Sbjct: 230 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 47 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF 106
+++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 118 HMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 174
Query: 107 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
N + T T Y APE +LG D++S G ++ E++ G
Sbjct: 175 STNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S GV++ E+I G
Sbjct: 177 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
M + + P +V L G +G + E +E SL +++ K L E R+ +
Sbjct: 137 MACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLP-EDRALYYL 191
Query: 61 GIA-KGLAFLHEELVPHIVHRDIKASNILLDQE-FNPKIGDFGLA-KLFPDNITH---IT 114
G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 192 GQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
I GT ++APE VLG K DV+S ++L +++G
Sbjct: 249 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
KI DFGLA+ D + T T Y APE +L D++S G ++ E+++GR
Sbjct: 165 KILDFGLARHTDDEM----TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART-- 175
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S GV++ E+I G
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG 61
L ++H N+V L T LV + V L DR+L EK + + +
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYT------EKDASLVIQ 113
Query: 62 -IAKGLAFLHEELVPHIVHRDIKASNIL-LDQEFNPKI--GDFGLAKLFPDNITHITTRI 117
+ + +LHE IVHRD+K N+L L E N KI DFGL+K+ + I +
Sbjct: 114 QVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM---STA 167
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT GY+APE + + D +S GV+ ++ G
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HP+++ LI + LV++ + L L + L+ ++ I + + ++
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVS 214
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAP 126
FLH +IVHRD+K NILLD ++ DFG + L P + GT GYLAP
Sbjct: 215 FLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAP 268
Query: 127 EYVLGGQLT-------MKADVYSFGVLVLEIISG 153
E +L + + D+++ GV++ +++G
Sbjct: 269 E-ILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 53 EKRSDICVGI----AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 108
E+ +C+ I A+ + FLH + ++HRD+K SNI + K+GDFGL
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 170
Query: 109 NITHIT-----------TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
+ T T GT Y++PE + G + K D++S G+++ E++
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 64
++RHPN+V + T +V EY L + A + + ++ +
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLIS 126
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTRIA-GTT 121
G+++ H + HRD+K N LLD P KI DFG +K ++ H + A GT
Sbjct: 127 GVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SVLHSQPKSAVGTP 180
Query: 122 GYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
Y+APE +L + K ADV+S GV + ++ G
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL-- 134
I++RDIK NILLD + + DFGL+K F + T GT Y+AP+ V GG
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH 239
Query: 135 TMKADVYSFGVLVLEIISG 153
D +S GVL+ E+++G
Sbjct: 240 DKAVDWWSLGVLMYELLTG 258
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
++HP++VEL+ +V+E+++ L ++ A + S I +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTG 122
L + H+ +I+HRD+K N+LL + N K+GDFG+A ++ R+ GT
Sbjct: 143 LRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPH 198
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE V DV+ GV++ ++SG
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ K+ DFGLAK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG 61
++ + HP L+ L +L+ E++ L DR+ + K++ + +
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI----AAEDYKMSEAEVINYMRQ 157
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLD--QEFNPKIGDFGLA-KLFPDNITHITTRIA 118
+GL +HE IVH DIK NI+ + + + KI DFGLA KL PD I +TT
Sbjct: 158 ACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT--- 211
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T + APE V + D+++ GVL ++SG
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI D+GLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 18/123 (14%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEII 151
KI DFGLA+ H +AG T Y APE +L D++S G ++ E++
Sbjct: 165 KILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 152 SGR 154
+GR
Sbjct: 218 TGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 18/123 (14%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEII 151
KI DFGLA+ H +AG T Y APE +L D++S G ++ E++
Sbjct: 165 KILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 152 SGR 154
+GR
Sbjct: 218 TGR 220
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T +AGT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
+G+ +LH ++HRD+K N+ L+ + + KIGDFGLA + T + GT Y
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNY 208
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
+APE + + + D++S G ++ ++ G+
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++H N+V L + LV+E+ + + L + N L+ E +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LKKYF---DSCNGDLDPEIVKSFLFQL 110
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
KGL F H +++HRD+K N+L+++ K+ DFGLA+ F + + + T
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLW 166
Query: 123 YLAPEYVLGGQL-TMKADVYSFGVLVLEIISG 153
Y P+ + G +L + D++S G + E+ +
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL----LGATKANIKLNWEKRSDI 58
L + HPN++ L+ + LV++++E + L+ ++ L T ++IK
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSLVLTPSHIKA-------Y 117
Query: 59 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ +GL +LH+ I+HRD+K +N+LLD+ K+ DFGLAK F ++
Sbjct: 118 MLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 119 GTTGYLAPEYVLGGQL-TMKADVYSFGVLVLEII 151
T Y APE + G ++ + D+++ G ++ E++
Sbjct: 175 -TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 18/123 (14%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 104 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 160
Query: 96 KIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEII 151
KI DFGLA+ H +AG T Y APE +L D++S G ++ E++
Sbjct: 161 KILDFGLAR-------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 152 SGR 154
+GR
Sbjct: 214 TGR 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 4 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 63
+++ HPN++ L R L+ EY L + L + + + ++ + I +A
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELA 133
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 123
L + H + V +HRDIK N+LL + KI DFG + P ++ T + GT Y
Sbjct: 134 DALMYCHGKKV---IHRDIKPENLLLGLKGELKIADFGWSVHAP-SLRRKT--MCGTLDY 187
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
L PE + G K D++ GVL E++ G
Sbjct: 188 LPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGL + D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I G +LH ++HRD+K N+ L+++ KIGDFGLA + T + GT
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTP 181
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y+APE + + + DV+S G ++ ++ G+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGT 120
+GL ++H ++HRD+K SN+L+++ KIGDFG+A+ P + T T
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 121 TGYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRN 155
Y APE +L + T D++S G + E+++ R
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I G +LH ++HRD+K N+ L+++ KIGDFGLA + T + GT
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTP 181
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y+APE + + + DV+S G ++ ++ G+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I G +LH ++HRD+K N+ L+++ KIGDFGLA + T + GT
Sbjct: 130 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTP 185
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y+APE + + + DV+S G ++ ++ G+
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 122
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 177
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 122
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 177
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 117
I V I K L LH +L ++HRD+K SN+L++ K DFG++ D++
Sbjct: 141 IAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-- 196
Query: 118 AGTTGYLAPEYV---LGGQ-LTMKADVYSFGVLVLEIISGR---NSGKAMWGQMNKFLLE 170
AG Y APE + L + ++K+D++S G+ +E+ R +S + Q+ + + E
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE 256
Query: 171 WAWQLHQEEKPLELVD 186
+ QL ++ E VD
Sbjct: 257 PSPQLPADKFSAEFVD 272
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGT 120
+GL ++H ++HRD+K SN+L+++ KIGDFG+A+ P + T T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 121 TGYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRN 155
Y APE +L + T D++S G + E+++ R
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 175
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S G ++ E+I G
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 131 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 187
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DFGLA+ D + ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 188 KILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
Query: 154 R 154
R
Sbjct: 243 R 243
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 122 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA- 177
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S G ++ E+I G
Sbjct: 178 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++H N+V L + LV+E+ + + L + N L+ E +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LKKYF---DSCNGDLDPEIVKSFLFQL 110
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 122
KGL F H +++HRD+K N+L+++ K+ +FGLA+ F + + + T
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLW 166
Query: 123 YLAPEYVLGGQL-TMKADVYSFGVLVLEIISGRNSGKAMW 161
Y P+ + G +L + D++S G + E+ N+G+ ++
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELA---NAGRPLF 203
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-- 175
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S G ++ E+I G
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S G ++ E+I G
Sbjct: 177 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S G ++ E+I G
Sbjct: 177 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ ++ DFGLAK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L LV E Y D ++ + + + + I
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQ 140
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ G+ ++H+ IVHRD+K N+LL+ ++ N +I DFGL+ F + + +I
Sbjct: 141 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI- 195
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 196 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEY-----VENNSLDRVLLGATKANIKLNWEKR 55
+ L +++H N++ L+ + Y++ L +++ +K + EK
Sbjct: 75 LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM------GLKFSEEKI 128
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 115
+ + KGL ++H +VHRD+K N+ ++++ KI DFGLA+ H
Sbjct: 129 QYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADA 178
Query: 116 RIAG---TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
+ G T Y APE +L D++S G ++ E+++G+ GK Q+ + L
Sbjct: 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 237
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S G ++ E+I G
Sbjct: 177 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTA- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S G ++ E+I G
Sbjct: 177 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+S + H +LV G CV G ILV E+V+ SLD L K I + W + ++ +
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD-TYLKKNKNCINILW--KLEVAKQL 122
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR----IA 118
A + FL E ++H ++ A NILL +E + K G+ KL I+ IT +
Sbjct: 123 AAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQ 178
Query: 119 GTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISG 153
++ PE + + L + D +SFG + EI SG
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 23/156 (14%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+++L T LV++ ++ L L + L+ ++ I + + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 125
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAP 126
LH+ +IVHRD+K NILLD + N K+ DFG + +L P + GT YLAP
Sbjct: 126 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAP 179
Query: 127 EYVLGGQLTM---------KADVYSFGVLVLEIISG 153
E + + +M + D++S GV++ +++G
Sbjct: 180 EII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEIILSKGYNK 238
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTG 122
+G+ +LH ++HRD+K N+ L+ + + KIGDFGLA K+ D + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKXLCGTPN 207
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y+APE + + + D++S G ++ ++ G+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L +RHPN++ L T +L+ E V L L A K + L ++ + I
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES--LTEDEATQFLKQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNI-LLDQEF-NPKIG--DFGLA-KLFPDNITHITTRI 117
G+ +LH + I H D+K NI LLD+ NP+I DFG+A K+ N I
Sbjct: 125 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNI 178
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 23/156 (14%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+++L T LV++ ++ L L + L+ ++ I + + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAP 126
LH+ +IVHRD+K NILLD + N K+ DFG + +L P + GT YLAP
Sbjct: 139 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAP 192
Query: 127 EYVLGGQLTM---------KADVYSFGVLVLEIISG 153
E + + +M + D++S GV++ +++G
Sbjct: 193 EII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 128 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 184
Query: 96 KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
KI DFGLA+ D + T Y APE +L D++S G ++ E+++GR
Sbjct: 185 KILDFGLARHTDDEM----XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTG 122
+G+ +LH ++HRD+K N+ L+ + + KIGDFGLA K+ D + GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPN 191
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y+APE + + + D++S G ++ ++ G+
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTG 122
+G+ +LH ++HRD+K N+ L+ + + KIGDFGLA K+ D + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPN 207
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
Y+APE + + + D++S G ++ ++ G+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR---IA 118
I G +LH ++HRD+K N+ L+++ KIGDFGLA + + R +
Sbjct: 148 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT----KVEYDGERKKVLC 200
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
GT Y+APE + + + DV+S G ++ ++ G+
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR---IA 118
I G +LH ++HRD+K N+ L+++ KIGDFGLA + + R +
Sbjct: 150 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT----KVEYDGERKKVLC 202
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
GT Y+APE + + + DV+S G ++ ++ G+
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L ++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQI 123
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L PK I DFGLA + + I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIF 178
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 175
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T T Y APE +LG D++S G ++ E+I G
Sbjct: 176 AGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 23/156 (14%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 67
HPN+++L T LV++ ++ L L + L+ ++ I + + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 68 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAP 126
LH+ +IVHRD+K NILLD + N K+ DFG + +L P + GT YLAP
Sbjct: 139 ALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTPSYLAP 192
Query: 127 EYVLGGQLTM---------KADVYSFGVLVLEIISG 153
E + + +M + D++S GV++ +++G
Sbjct: 193 EII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 211 AVDWWALGVLIYEMAAG 227
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR---IA 118
I G +LH ++HRD+K N+ L+++ KIGDFGLA + + R +
Sbjct: 124 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLC 176
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
GT Y+APE + + + DV+S G ++ ++ G+
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 211 AVDWWALGVLIYEMAAG 227
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L LV E Y D ++ + + + + I
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQ 134
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ G+ ++H+ IVHRD+K N+LL+ ++ N +I DFGL+ F + + +I
Sbjct: 135 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI- 189
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 190 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 212
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 213 AVDWWALGVLIYEMAAG 229
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 64
++RHPN+V + T ++ EY L + A + + ++ +
Sbjct: 72 SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR----FSEDEARFFFQQLLS 127
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTT 121
G+++ H I HRD+K N LLD P KI DFG +K ++ H + GT
Sbjct: 128 GVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 181
Query: 122 GYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
Y+APE +L + K ADV+S GV + ++ G
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L +RHPN++ L T +L+ E V L L A K + L ++ + I
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES--LTEDEATQFLKQI 117
Query: 63 AKGLAFLHEELVPHIVHRDIKASNI-LLDQEF-NPKIG--DFGLA-KLFPDNITHITTRI 117
G+ +LH + I H D+K NI LLD+ NP+I DFG+A K+ N I
Sbjct: 118 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNI 171
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIILSKGYNK 203
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 204 AVDWWALGVLIYEMAAG 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI FGLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L +RHPN++ L T +L+ E V L L A K + L ++ + I
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES--LTEDEATQFLKQI 138
Query: 63 AKGLAFLHEELVPHIVHRDIKASNI-LLDQEF-NPKIG--DFGLA-KLFPDNITHITTRI 117
G+ +LH + I H D+K NI LLD+ NP+I DFG+A K+ N I
Sbjct: 139 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNI 192
Query: 118 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 64
++RHPN+V + T +V EY L + A + + ++ +
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLIS 126
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTT 121
G+++ H + HRD+K N LLD P KI DFG +K ++ H + GT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 180
Query: 122 GYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
Y+APE +L + K ADV+S GV + ++ G
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 64
++RHPN+V + T +V EY L + A + + ++ +
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLIS 125
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTT 121
G+++ H + HRD+K N LLD P KI DFG +K ++ H + GT
Sbjct: 126 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 179
Query: 122 GYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
Y+APE +L + K ADV+S GV + ++ G
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI DF LA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDFYLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI D GLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 177 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 166 KFL 168
K +
Sbjct: 236 KVI 238
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 114 MELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART-- 168
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228
Query: 166 KFL 168
K +
Sbjct: 229 KVI 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVY--------EYVENNSLDRVLLGATKANIKLNWEK 54
+ N+ HP++V+LIG + I++ Y+E N +L +++
Sbjct: 79 MKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ----- 133
Query: 55 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
I K +A+L + VHRDI NIL+ K+GDFGL++ D +
Sbjct: 134 -------ICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 183
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
+ +++PE + + T +DV+ F V + EI+S +G+ F LE
Sbjct: 184 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS--------FGKQPFFWLENKDV 235
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEE 234
+ EK L P+L PP + Y + C S RP+ +++ L+ ++ ++
Sbjct: 236 IGVLEKGDRLPKPDLC--PP---VLYTLMT-RCWDYDPSDRPRFTELVCSLSDVYQMEKD 289
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L LV E Y D ++ + + + + I
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQ 157
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ G+ ++H+ IVHRD+K N+LL+ ++ N +I DFGL+ F + + +I
Sbjct: 158 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI- 212
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 213 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVY--------EYVENNSLDRVLLGATKANIKLNWEK 54
+ N+ HP++V+LIG + I++ Y+E N +L +++
Sbjct: 63 MKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ----- 117
Query: 55 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
I K +A+L + VHRDI NIL+ K+GDFGL++ D +
Sbjct: 118 -------ICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 167
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
+ +++PE + + T +DV+ F V + EI+S +G+ F LE
Sbjct: 168 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS--------FGKQPFFWLENKDV 219
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEE 234
+ EK L P+L PP + Y + C S RP+ +++ L+ ++ ++
Sbjct: 220 IGVLEKGDRLPKPDLC--PP---VLYTLMT-RCWDYDPSDRPRFTELVCSLSDVYQMEKD 273
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 177 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 166 KFL 168
K +
Sbjct: 236 KVI 238
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 123 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA- 178
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
+ + T Y APE +LG D++S G ++ E+I G
Sbjct: 179 -GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVY--------EYVENNSLDRVLLGATKANIKLNWEK 54
+ N+ HP++V+LIG + I++ Y+E N +L +++
Sbjct: 67 MKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ----- 121
Query: 55 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
I K +A+L + VHRDI NIL+ K+GDFGL++ D +
Sbjct: 122 -------ICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQ 174
+ +++PE + + T +DV+ F V + EI+S +G+ F LE
Sbjct: 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS--------FGKQPFFWLENKDV 223
Query: 175 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEE 234
+ EK L P+L PP + Y + C S RP+ +++ L+ ++ ++
Sbjct: 224 IGVLEKGDRLPKPDLC--PP---VLYTLMT-RCWDYDPSDRPRFTELVCSLSDVYQMEKD 277
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L LV E Y D ++ + + + + I
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQ 158
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ G+ ++H+ IVHRD+K N+LL+ ++ N +I DFGL+ F + + +I
Sbjct: 159 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI- 213
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 214 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI D GLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+ + + P +V L G +G + E +E SL +++ + E R+ +
Sbjct: 118 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYL 172
Query: 61 GIA-KGLAFLHEELVPHIVHRDIKASNILLDQEFN-PKIGDFGLA-KLFPDNITH---IT 114
G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 173 GQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
I GT ++APE V+G K D++S ++L +++G
Sbjct: 230 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+ + + P +V L G +G + E +E SL +++ + E R+ +
Sbjct: 102 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYL 156
Query: 61 GIA-KGLAFLHEELVPHIVHRDIKASNILLDQEFN-PKIGDFGLA-KLFPDNITH---IT 114
G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 157 GQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 213
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
I GT ++APE V+G K D++S ++L +++G
Sbjct: 214 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRR-----ILVYEYVENNSLDRVLLGA--TKANIKLNWEKR 55
+ + HPN++ L+G C++ + + +++ +++ L LL + + +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 115
V IA G+ +L + +HRD+ A N +L + + DFGL+K +
Sbjct: 150 LKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
Query: 116 RIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMW-GQMNKFLLEWAW 173
RIA ++A E + T K+DV++FGV + EI + G + G N + ++
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT---RGMTPYPGVQNHEMYDYLL 263
Query: 174 QLHQEEKPLELVD 186
H+ ++P + +D
Sbjct: 264 HGHRLKQPEDCLD 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L V H N++ L T +L+ E V L L A K + L+ E+ + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L + P K+ DFGLA D + I
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
+ + + P +V L G +G + E +E SL +++ + E R+ +
Sbjct: 116 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYL 170
Query: 61 GIA-KGLAFLHEELVPHIVHRDIKASNILLDQEFN-PKIGDFGLA-KLFPDNITH---IT 114
G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 171 GQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 227
Query: 115 TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
I GT ++APE V+G K D++S ++L +++G
Sbjct: 228 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L V H N++ L T +L+ E V L L A K + L+ E+ + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L + P K+ DFGLA D + I
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ ++ H NL+ L G + +++ + LDR L + + L S V
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQ 119
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+A+G+ +L + +HRD+ A N+LL KIGDFGL + P N H +
Sbjct: 120 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 122 --GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ APE + + +D + FGV + E+ + G+ W +N
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNS---LDRVLLGATKANI----KLNWEKR 55
L +++H N++ L+ T +E+ S L L+GA NI L+ E
Sbjct: 73 LKHLKHENVIGLLDVFTPATS-------IEDFSEVYLVTTLMGADLNNIVKCQALSDEHV 125
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HIT 114
+ + +GL ++H I+HRD+K SN+ ++++ +I DFGLA+ + +T ++
Sbjct: 126 QFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVA 182
Query: 115 TRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
TR Y APE +L D++S G ++ E++ G+
Sbjct: 183 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNS---LDRVLLGATKANI----KLNWEKR 55
L +++H N++ L+ T +E+ S L L+GA NI L+ E
Sbjct: 81 LKHLKHENVIGLLDVFTPATS-------IEDFSEVYLVTTLMGADLNNIVKSQALSDEHV 133
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HIT 114
+ + +GL ++H I+HRD+K SN+ ++++ +I DFGLA+ + +T ++
Sbjct: 134 QFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA 190
Query: 115 TRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
TR Y APE +L D++S G ++ E++ G+
Sbjct: 191 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 40 LLGATKANI----KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP 95
L+GA NI KL + + I +GL ++H I+HRD+K SN+ ++++
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCEL 164
Query: 96 KIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISG 153
KI D GLA+ D +T ++ TR Y APE +L D++S G ++ E+++G
Sbjct: 165 KILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
Query: 154 R 154
R
Sbjct: 220 R 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L V H N++ L T +L+ E V L L A K + L+ E+ + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L + P K+ DFGLA D + I
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ ++ H NL+ L G + +++ + LDR L + + L S V
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQ 119
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+A+G+ +L + +HRD+ A N+LL KIGDFGL + P N H +
Sbjct: 120 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 122 --GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ APE + + +D + FGV + E+ + G+ W +N
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 219
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLG-ATKAN---IKLNWEKRS 56
L ++HPN++ L + R L+++Y E++ + A+KAN ++L
Sbjct: 72 LRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK 131
Query: 57 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-----KIGDFGLAKLFPDNIT 111
+ I G+ +LH V +HRD+K +NIL+ E P KI D G A+LF +
Sbjct: 132 SLLYQILDGIHYLHANWV---LHRDLKPANILVMGE-GPERGRVKIADMGFARLFNSPLK 187
Query: 112 HIT--TRIAGTTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIISG 153
+ + T Y APE +LG + KA D+++ G + E+++
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ ++ H NL+ L G + +++ + LDR L + + L S V
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQ 119
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+A+G+ +L + +HRD+ A N+LL KIGDFGL + P N H +
Sbjct: 120 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 122 --GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ APE + + +D + FGV + E+ + G+ W +N
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ ++ H NL+ L G + +++ + LDR L + + L R V
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLGTLSR--YAVQ 129
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+A+G+ +L + +HRD+ A N+LL KIGDFGL + P N H +
Sbjct: 130 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 122 --GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ APE + + +D + FGV + E+ + G+ W +N
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNS---LDRVLLGATKANI----KLNWEKR 55
L +++H N++ L+ T +E+ S L L+GA NI L+ E
Sbjct: 81 LKHLKHENVIGLLDVFTPATS-------IEDFSEVYLVTTLMGADLNNIVKCQALSDEHV 133
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HIT 114
+ + +GL ++H I+HRD+K SN+ ++++ +I DFGLA+ + +T ++
Sbjct: 134 QFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA 190
Query: 115 TRIAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
TR Y APE +L D++S G ++ E++ G+
Sbjct: 191 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 114 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 168
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228
Query: 166 KFL 168
K +
Sbjct: 229 KVI 231
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ ++ H NL+ L G + +++ + LDR L + + L R V
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLGTLSR--YAVQ 129
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+A+G+ +L + +HRD+ A N+LL KIGDFGL + P N H +
Sbjct: 130 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 122 --GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ APE + + +D + FGV + E+ + G+ W +N
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 229
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L V H N++ L T +L+ E V L L A K + L+ E+ + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L + P K+ DFGLA D + I
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 169
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 170 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 229
Query: 166 KFL 168
K +
Sbjct: 230 KVI 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 169
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 170 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 229
Query: 166 KFL 168
K +
Sbjct: 230 KVI 232
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ ++ H NL+ L G + +++ + LDR L + + L S V
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQ 123
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+A+G+ +L + +HRD+ A N+LL KIGDFGL + P N H +
Sbjct: 124 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 122 --GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ APE + + +D + FGV + E+ + G+ W +N
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 223
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 2 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+ ++ H NL+ L G + +++ + LDR L + + L R V
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLGTLSR--YAVQ 123
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+A+G+ +L + +HRD+ A N+LL KIGDFGL + P N H +
Sbjct: 124 VAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 122 --GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
+ APE + + +D + FGV + E+ + G+ W +N
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 122 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 236
Query: 166 KFL 168
K +
Sbjct: 237 KVI 239
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 177 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 166 KFL 168
K +
Sbjct: 236 KVI 238
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 120 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 174
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 175 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 234
Query: 166 KFL 168
K +
Sbjct: 235 KVI 237
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
L V H N++ L T +L+ E V L L A K + L+ E+ + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIA 118
G+ +LH I H D+K NI+L + P K+ DFGLA D + I
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 10 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 69
N++ELI TR LV+E ++ S+ L + N + S + +A L FL
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSI----LAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 70 HEELVPHIVHRDIKASNILLD--QEFNP-KIGDFGLAK--LFPDNITHIT----TRIAGT 120
H I HRD+K NIL + ++ +P KI DF L ++ T IT T G+
Sbjct: 128 H---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 121 TGYLAPEY--VLGGQLTM---KADVYSFGVLVLEIISG 153
Y+APE V Q T + D++S GV++ ++SG
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 27/165 (16%)
Query: 6 VRHPNLVELIGCCV----QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+RH N++ I + T+ L+ Y E SL L T + I +
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLS 113
Query: 62 IAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT- 115
IA GLA LH E+ P I HRD+K+ NIL+ + I D GLA + + +
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 116 ---RIAGTTGYLAPEYVLGGQLTM-------KADVYSFGVLVLEI 150
R+ GT Y+APE VL + + + D+++FG+++ E+
Sbjct: 174 NNPRV-GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 175
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 166 KFL 168
K +
Sbjct: 236 KVI 238
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 122 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 236
Query: 166 KFL 168
K +
Sbjct: 237 KVI 239
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV-GIAK 64
+HPN++ L G LV E + L D++L K E+ + + I K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGK 132
Query: 65 GLAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAK-LFPDNITHITTRIAG 119
+ +LH + V VHRD+K SNIL +D+ NP +I DFG AK L +N +T
Sbjct: 133 TVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CY 187
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T ++APE + D++S G+L+ +++G
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 27/165 (16%)
Query: 6 VRHPNLVELIGCCV----QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
+RH N++ I + T+ L+ Y E SL L T + I +
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLS 113
Query: 62 IAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT- 115
IA GLA LH E+ P I HRD+K+ NIL+ + I D GLA + + +
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 116 ---RIAGTTGYLAPEYVLGGQLTM-------KADVYSFGVLVLEI 150
R+ GT Y+APE VL + + + D+++FG+++ E+
Sbjct: 174 NNPRV-GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ ++ +G
Sbjct: 218 AVDWWALGVLIYQMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+D++ ++ DFG AK + T + GT YLAPE +L
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 204
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 205 AVDWWALGVLIYEMAAG 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEY-----VENNSLDRVLLGATKANIKLNWEKR 55
+ L +++H N++ L+ + Y++ L +++ ++ + EK
Sbjct: 93 LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM------GMEFSEEKI 146
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 115
+ + KGL ++H +VHRD+K N+ ++++ KI DFGLA+ H
Sbjct: 147 QYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADA 196
Query: 116 RIAG---TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
+ G T Y APE +L D++S G ++ E+++G+ GK Q+ + L
Sbjct: 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--T 175
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 166 KFL 168
K +
Sbjct: 236 KVI 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-- 175
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 235
Query: 166 KFL 168
K +
Sbjct: 236 KVI 238
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 159 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 213
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 273
Query: 166 KFL 168
K +
Sbjct: 274 KVI 276
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKG 65
+HPN++ L G +V E ++ L D++L + + S + I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-----FSEREASAVLFTITKT 128
Query: 66 LAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAK-LFPDNITHITTRIAGT 120
+ +LH + V VHRD+K SNIL +D+ NP +I DFG AK L +N +T T
Sbjct: 129 VEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYT 183
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + D++S GVL+ +++G
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV-GIAK 64
+HPN++ L G LV E + L D++L K E+ + + I K
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGK 132
Query: 65 GLAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAK-LFPDNITHITTRIAG 119
+ +LH + V VHRD+K SNIL +D+ NP +I DFG AK L +N +T
Sbjct: 133 TVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CY 187
Query: 120 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T ++APE + D++S G+L+ +++G
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 159 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA- 214
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 215 -GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 273
Query: 166 KFL 168
K +
Sbjct: 274 KVI 276
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 169
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 170 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 229
Query: 166 KFL 168
K +
Sbjct: 230 KVI 232
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 62
+S + H +LV G C G ILV E+V+ SLD L K I + W + ++ +
Sbjct: 66 MSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLD-TYLKKNKNCINILW--KLEVAKQL 122
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR----IA 118
A + FL E ++H ++ A NILL +E + K G+ KL I+ IT +
Sbjct: 123 AWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQ 178
Query: 119 GTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISG 153
++ PE + + L + D +SFG + EI SG
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 18/109 (16%)
Query: 58 ICVGIAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 112
I + IA GLA LH E+ P I HRD+K+ NIL+ + I D GLA + +
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
Query: 113 ITT----RIAGTTGYLAPEYVLGGQLTM-------KADVYSFGVLVLEI 150
+ R+ GT Y+APE VL + + + D+++FG+++ E+
Sbjct: 199 LDVGNNPRV-GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
I KG+ ++H + +++RD+K SNI L KIGDFGL ++ R GT
Sbjct: 131 ITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XRSKGTL 185
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEII 151
Y++PE + + D+Y+ G+++ E++
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 126 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART-- 180
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 181 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 240
Query: 166 KFL 168
K +
Sbjct: 241 KVI 243
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+++DQ+ ++ DFG AK + T + GT YLAPE ++
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIISKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 29/166 (17%)
Query: 6 VRHPNLVELIGCCV----QGTRRILVYEYVENNSLDRVLLGAT-KANIKLNWEKRSDICV 60
+RH N++ I + T+ L+ Y E+ SL L T + ++ L + V
Sbjct: 59 LRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR------LAV 112
Query: 61 GIAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI-- 113
A GLA LH E+ P I HRD K+ N+L+ I D GLA + ++
Sbjct: 113 SAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDI 172
Query: 114 --TTRIAGTTGYLAPEYVLGGQLTMKA-------DVYSFGVLVLEI 150
R+ GT Y+APE VL Q+ D+++FG+++ EI
Sbjct: 173 GNNPRV-GTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 3 LSNVRHPNLVELIGCCVQG------TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 56
L ++RH N++ L+ T LV ++ + LG + KL ++
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD------LGKLMKHEKLGEDRIQ 131
Query: 57 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 116
+ + KGL ++H I+HRD+K N+ ++++ KI DFGLA+ +
Sbjct: 132 FLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV- 187
Query: 117 IAGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGRN 155
T Y APE +L + T D++S G ++ E+I+G+
Sbjct: 188 ---TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAP +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIA 118
+ G+ + H+ IVHRD+K N+LL+ ++ N +I DFGL+ F +
Sbjct: 135 VLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKI 189
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL G K DV+S GV++ ++SG
Sbjct: 190 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENN---SLDRVLLGATKANIKLNWEKRSDIC 59
L +++H N+V L LV+EY++ + LD N+KL
Sbjct: 54 LKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL-------FL 106
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL--AKLFPDNITHITTRI 117
+ +GLA+ H + ++HRD+K N+L+++ K+ DFGL AK P T
Sbjct: 107 FQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTYDNE 160
Query: 118 AGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
T Y P+ +LG + + D++ G + E+ +GR
Sbjct: 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L LV E L D ++L + + + I
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA-----AVIMKQ 129
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIA 118
+ G +LH+ +IVHRD+K N+LL+ + KI DFGL+ F +
Sbjct: 130 VLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERL 184
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL + K DV+S GV++ ++ G
Sbjct: 185 GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 64
++RHPN+V + T +V EY L + A + + ++ +
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLIS 126
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTT 121
G+++ H + HRD+K N LLD P KI FG +K ++ H + GT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTP 180
Query: 122 GYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
Y+APE +L + K ADV+S GV + ++ G
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 64
++RHPN+V + T +V EY L + A + + ++ +
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----FSEDEARFFFQQLIS 126
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTT 121
G+++ H + HRD+K N LLD P KI FG +K ++ H + GT
Sbjct: 127 GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTP 180
Query: 122 GYLAPEYVLGGQLTMK-ADVYSFGVLVLEIISG 153
Y+APE +L + K ADV+S GV + ++ G
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 136
+++RD+K N+L+DQ+ ++ DFG AK + T + GT LAPE +L
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALAPEIILSKGYNK 217
Query: 137 KADVYSFGVLVLEIISG 153
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 76 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG---- 131
H VHRDIK N+LLD + ++ DFG D+ T ++ GT Y++PE +
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 132 -GQLTMKADVYSFGVLVLEIISG 153
G+ + D +S GV + E++ G
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYG 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 7 RHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKG 65
+HPN++ L G +V E + L D++L + + S + I K
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF-----FSEREASAVLFTITKT 128
Query: 66 LAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ +LH + V VHRD+K SNIL +D+ NP +I DFG AK + T T
Sbjct: 129 VEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TA 184
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE + D++S GVL+ ++G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 76 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG---- 131
H VHRDIK N+LLD + ++ DFG D+ T ++ GT Y++PE +
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 132 -GQLTMKADVYSFGVLVLEIISG 153
G+ + D +S GV + E++ G
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
++HP++VEL+ +V+E+++ L ++ A + S I +
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTG 122
L + H+ +I+HRD+K +LL + N K+G FG+A ++ R+ GT
Sbjct: 145 LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPH 200
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE V DV+ GV++ ++SG
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG 61
L + HPN+++L LV E L D ++L + + + I
Sbjct: 58 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA-----AVIMKQ 112
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIA 118
+ G +LH+ +IVHRD+K N+LL+ + KI DFGL+ F +
Sbjct: 113 VLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERL 167
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GT Y+APE VL + K DV+S GV++ ++ G
Sbjct: 168 GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 77 IVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 133
IVHRD+K N+L D+E I DFGL+K+ + + + GT GY+APE +
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 134 LTMKADVYSFGVLVLEIISG 153
+ D +S GV+ ++ G
Sbjct: 199 YSKAVDCWSIGVIAYILLCG 218
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
++HP++VEL+ +V+E+++ L ++ A + S I +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTG 122
L + H+ +I+HRD+K +LL + N K+G FG+A ++ R+ GT
Sbjct: 143 LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPH 198
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
++APE V DV+ GV++ ++SG
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IA 63
++HPN+V L + + LV++ V L ++ + E + C+ I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQIL 115
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGT 120
+ +A+ H IVHR++K N+LL + K+ DFGLA N + AGT
Sbjct: 116 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT 170
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GYL+PE + + D+++ GV++ ++ G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAK 64
++HPN+V L + + LV++ V L ++ + E + C+ I +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILE 139
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+A+ H IVHR++K N+LL + K+ DFGLA N + AGT
Sbjct: 140 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 194
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GYL+PE + + D+++ GV++ ++ G
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-- 175
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 176 AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWN 235
Query: 166 KFL 168
K +
Sbjct: 236 KVI 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQE-FNPKIGDFGLAKLFPDNITHITTRIAG- 119
+ +GL ++H +++HRD+K +N+ ++ E KIGDFGLA++ + +H G
Sbjct: 129 LLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 120 -TTGYLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGRN--SGKAMWGQMNKFLLEWAWQL 175
T Y +P +L KA D+++ G + E+++G+ +G QM + +LE +
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM-QLILESIPVV 244
Query: 176 HQEEK 180
H+E++
Sbjct: 245 HEEDR 249
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IA 63
++HPN+V L + + LV++ V L ++ + E + C+ I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQIL 115
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGT 120
+ +A+ H IVHR++K N+LL + K+ DFGLA N + AGT
Sbjct: 116 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT 170
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GYL+PE + + D+++ GV++ ++ G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 5 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IA 63
++HPN+V L + + LV++ V L ++ + E + C+ I
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQIL 114
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGT 120
+ +A+ H IVHR++K N+LL + K+ DFGLA N + AGT
Sbjct: 115 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT 169
Query: 121 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GYL+PE + + D+++ GV++ ++ G
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ KG+ +LH + I+HRDIK SN+L+ ++ + KI DFG++ F + ++ + GT
Sbjct: 146 LIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-GTP 201
Query: 122 GYLAPEYVLGGQ--LTMKA-DVYSFGVLVLEIISGR 154
++APE + + + KA DV++ GV + + G+
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 48 IKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP 107
++L+ E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA- 176
Query: 108 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR--NSGKAMWGQMN 165
+ + T Y APE +LG D++S G ++ E++ + G+ Q N
Sbjct: 177 -GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 235
Query: 166 KFL 168
K +
Sbjct: 236 KVI 238
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 76 HIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLG--- 131
H VHRDIK NIL+D + ++ DFG KL D + + GT Y++PE +
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAMEG 253
Query: 132 --GQLTMKADVYSFGVLVLEIISG 153
G+ + D +S GV + E++ G
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAW 173
Y APE + G T DV+S G ++ E++ G+ +SG ++ K L
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 174 QLHQEEKP--LELVDPELGEYPPNEIIR 199
+ +E P E P++ +P ++ R
Sbjct: 245 EQIREMNPNYTEFAFPQIKAHPWTKVFR 272
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 8 HPNLVELIGCCVQGTRR------ILVYEYVENNSLDRVLL----GATKANIKLNWEKRSD 57
HP++ +L+G ++ + +++ ++++ L LL G N+ L R
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR-- 141
Query: 58 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTR 116
V IA G+ +L + +HRD+ A N +L ++ + DFGL+ K++ +
Sbjct: 142 FMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 117 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
+LA E + T+ +DV++FGV + EI++
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 216 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 226 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 224 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 267 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAW 173
Y APE + G T DV+S G ++ E++ G+ +SG ++ K L
Sbjct: 193 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 249
Query: 174 QLHQEEKP--LELVDPELGEYPPNEIIR 199
+ +E P E P++ +P ++ R
Sbjct: 250 EQIREMNPNYTEFKFPQIKAHPWTKVFR 277
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 125
LA LH + +VH D+K +NI L K+GDFGL L G Y+A
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 126 PEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFLL 169
PE +L G ADV+S G+ +LE+ G W Q+ + L
Sbjct: 225 PE-LLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL 269
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 146 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 200
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 201 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 37/184 (20%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGI 62
HPN++ C + T R L Y +E +L+ L +K N+KL E + I
Sbjct: 68 HPNVIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDN 109
A G+A LH I+HRD+K NIL+ DQ+ + I DFGL K
Sbjct: 125 ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 110 ITHITTRI---AGTTGYLAPEYV-------LGGQLTMKADVYSFGVLVLEIISGRNSGKA 159
+ T + +GT+G+ APE + +LT D++S G + I+S GK
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS---KGKH 238
Query: 160 MWGQ 163
+G
Sbjct: 239 PFGD 242
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 101/257 (39%), Gaps = 39/257 (15%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 60
M RH N+V +G C+ ++ + +L V+ A I L+ K I
Sbjct: 81 MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV---RDAKIVLDVNKTRQIAQ 137
Query: 61 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK--IGDFGL---AKLFPDNITHITT 115
I KG+ +LH + I+H+D+K+ N+ D N K I DFGL + +
Sbjct: 138 EIVKGMGYLHAK---GILHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKL 191
Query: 116 RIA-GTTGYLAPEYVLGGQ---------LTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 165
RI G +LAPE + + +DV++ G + E+ + W
Sbjct: 192 RIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE------WPFKT 245
Query: 166 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 225
+ WQ+ KP L +G+ + + FC RP +++ ML
Sbjct: 246 QPAEAIIWQMGTGMKP-NLSQIGMGKEISD-------ILLFCWAFEQEERPTFTKLMDML 297
Query: 226 TKNIRLNEEELTAPGLF 242
K + N L+ PG F
Sbjct: 298 EKLPKRN-RRLSHPGHF 313
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 1 MTLSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
M +N P +V+L C Q + + +V EY+ L ++ + ++ W K
Sbjct: 129 MAFAN--SPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAE 182
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIA 118
V +A L +H ++HRD+K N+LLD+ + K+ DFG K+ + H T +
Sbjct: 183 VVLA--LDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV- 236
Query: 119 GTTGYLAPEYVLG----GQLTMKADVYSFGVLVLEIISG 153
GT Y++PE + G + D +S GV + E++ G
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N+++I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ +LHE I+HRD+K N+LL + KI DFG +K+ + T + + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 180
Query: 122 GYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 153
YLAPE ++ D +S GV++ +SG
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ +LHE I+HRD+K N+LL + KI DFG +K+ + T + + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 180
Query: 122 GYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 153
YLAPE ++ D +S GV++ +SG
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ +LHE I+HRD+K N+LL + KI DFG +K+ + T + + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 180
Query: 122 GYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 153
YLAPE ++ D +S GV++ +SG
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ +LHE I+HRD+K N+LL + KI DFG +K+ + T + + GT
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 179
Query: 122 GYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 153
YLAPE ++ D +S GV++ +SG
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAW 173
Y APE + G T DV+S G ++ E++ G+ +SG ++ K L
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 174 QLHQEEKP--LELVDPELGEYPPNEIIR 199
+ +E P E P++ +P ++ R
Sbjct: 245 EQIREMNPNYTEFAFPQIKAHPWTKVFR 272
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ +LHE I+HRD+K N+LL + KI DFG +K+ + T + + GT
Sbjct: 132 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 186
Query: 122 GYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 153
YLAPE ++ D +S GV++ +SG
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ +LHE I+HRD+K N+LL + KI DFG +K+ + T + + GT
Sbjct: 251 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 305
Query: 122 GYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 153
YLAPE ++ D +S GV++ +SG
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ +LHE I+HRD+K N+LL + KI DFG +K+ + T + + GT
Sbjct: 265 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 319
Query: 122 GYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 153
YLAPE ++ D +S GV++ +SG
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 221
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 3 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV- 60
++ + H NL++L +LV EYV+ L DR++ + N + I
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII------DESYNLTELDTILFM 193
Query: 61 -GIAKGLAFLHEELVPHIVHRDIKASNIL-LDQEFNP-KIGDFGLAKLF-PDNITHITTR 116
I +G+ +H+ +I+H D+K NIL ++++ KI DFGLA+ + P +
Sbjct: 194 KQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF- 249
Query: 117 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS--GKAMWGQMNKFLLEWAWQ 174
GT +LAPE V ++ D++S GV+ ++SG + G +N +L W
Sbjct: 250 --GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNN-ILACRWD 306
Query: 175 LHQEE 179
L EE
Sbjct: 307 LEDEE 311
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 152 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 206
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 207 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 200 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQ-----EFNPKIGDFGLAKLFPDNITHITTR--I 117
GLA LH +IVHRD+K NIL+ + I DFGL K + R +
Sbjct: 130 GLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 118 AGTTGYLAPEYV---LGGQLTMKADVYSFGVLVLEIISGRNS--GKAMWGQMNKFLLEWA 172
GT G++APE + T D++S G + +IS + GK++ Q N L +
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACS 246
Query: 173 WQLHQEEKPLELVDPELGE 191
EK +++ EL E
Sbjct: 247 LDCLHPEKHEDVIARELIE 265
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 141 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 195
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 196 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 200 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 137 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 191
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 192 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 134 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 188
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 189 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD + K+ DFG AK N++ I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T DV+S G ++ E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 66
HPN+V+L LV E + L +R+ K + + S I + +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-----KKKKHFSETEASYIMRKLVSAV 119
Query: 67 AFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGY 123
+ +H+ +VHRD+K N+L E + KI DFG A+L P + + T T Y
Sbjct: 120 SHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHY 175
Query: 124 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 154
APE + D++S GV++ ++SG+
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
Query: 76 HIVHRDIKASNILLDQ-EFNPKIGDFGLA-KLFPD--NITHITTRIAGTTGYLAPEYVLG 131
++ HRDIK N+L+++ + K+ DFG A KL P N+ +I +R Y APE + G
Sbjct: 151 NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-----YRAPELIFG 205
Query: 132 GQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
Q T D++S G + E++ G G GQ+++ +
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 25/135 (18%)
Query: 26 LVYEYVENNSLDR------VLLGATKANIKLNWEKRSDICV--GIAKGLAFLHEELVPHI 77
++YEY+EN+S+ + VL I + K C+ + +++H E +I
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK----CIIKSVLNSFSYIHNE--KNI 173
Query: 78 VHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG---YLAPEYVLGGQL 134
HRD+K SNIL+D+ K+ DFG ++ D +I G+ G ++ PE+
Sbjct: 174 CHRDVKPSNILMDKNGRVKLSDFGESEYMVD------KKIKGSRGTYEFMPPEFFSNESS 227
Query: 135 T--MKADVYSFGVLV 147
K D++S G+ +
Sbjct: 228 YNGAKVDIWSLGICL 242
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 33/180 (18%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGI 62
HPN++ C + T R L Y +E +L+ L +K N+KL E + I
Sbjct: 86 HPNVIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDN 109
A G+A LH I+HRD+K NIL+ DQ+ + I DFGL K
Sbjct: 143 ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 110 ITHITTRI---AGTTGYLAPEYV---LGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 163
+ +GT+G+ APE + +LT D++S G + I+S GK +G
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS---KGKHPFGD 256
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 33/180 (18%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGI 62
HPN++ C + T R L Y +E +L+ L +K N+KL E + I
Sbjct: 86 HPNVIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDN 109
A G+A LH I+HRD+K NIL+ DQ+ + I DFGL K
Sbjct: 143 ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 110 ITHITTRI---AGTTGYLAPEYV---LGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 163
+ +GT+G+ APE + +LT D++S G + I+S GK +G
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS---KGKHPFGD 256
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 64 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAG 119
+ LA++H I HRDIK N+LLD K+ DFG AK+ N++ I +R
Sbjct: 152 RSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-- 206
Query: 120 TTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 154
Y APE + G T D++S G ++ E++ G+
Sbjct: 207 ---YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP------KIGDFGLAKLFPDNITHITTRIA 118
GL ++H I+H DIK N+L++ +P KI D G A + + H T I
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQ 197
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y +PE +LG AD++S L+ E+I+G
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP------KIGDFGLAKLFPDNITHITTRIA 118
GL ++H I+H DIK N+L++ +P KI D G A + + H T I
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQ 197
Query: 119 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
T Y +PE +LG AD++S L+ E+I+G
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 76 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT---------TRIAGTTGYLAP 126
+++HRD+K SN+L++ + K+ DFGLA++ ++ + T T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 127 EYVL-GGQLTMKADVYSFGVLVLEIISGR 154
E +L + + DV+S G ++ E+ R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 6 VRHPNLVELIGCC---------VQGTRRILVYEYVENNS---LDRVLLGATKANIKLNWE 53
++H N+V LI C +G+ LV+++ E++ L VL+ T + IK
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIK---- 128
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
+ + GL ++H I+HRD+KA+N+L+ ++ K+ DFGLA+ F
Sbjct: 129 ---RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 114 TTRIAG---TTGYLAPEYVLG 131
R T Y PE +LG
Sbjct: 183 PNRYXNRVVTLWYRPPELLLG 203
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 76 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT---------TRIAGTTGYLAP 126
+++HRD+K SN+L++ + K+ DFGLA++ ++ + T T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 127 EYVL-GGQLTMKADVYSFGVLVLEIISGR 154
E +L + + DV+S G ++ E+ R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 6 VRHPNLVELIGCC---------VQGTRRILVYEYVENNS---LDRVLLGATKANIKLNWE 53
++H N+V LI C +G+ LV+++ E++ L VL+ T + IK
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIK---- 127
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
+ + GL ++H I+HRD+KA+N+L+ ++ K+ DFGLA+ F
Sbjct: 128 ---RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 181
Query: 114 TTRIAG---TTGYLAPEYVLG 131
R T Y PE +LG
Sbjct: 182 PNRYXNRVVTLWYRPPELLLG 202
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAK 64
++HPN+V L + LV++ V L ++ + E + C+ I +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIHQILE 141
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ +H+ IVHRD+K N+LL + K+ DFGLA + AGT
Sbjct: 142 SVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTP 197
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GYL+PE + D+++ GV++ ++ G
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 26 LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKAS 85
++ EYV + +L +VL ++ + S + + + F+H I HRDIK
Sbjct: 115 VIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---GICHRDIKPQ 170
Query: 86 NILLDQEFNP-KIGDFGLA-KLFPD--NITHITTRIAGTTGYLAPEYVLGG-QLTMKADV 140
N+L++ + N K+ DFG A KL P ++ I +R Y APE +LG + T D+
Sbjct: 171 NLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRF-----YRAPELMLGATEYTPSIDL 225
Query: 141 YSFGVLVLEIISGR 154
+S G + E+I G+
Sbjct: 226 WSIGCVFGELILGK 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 6 VRHPNLVELIGCC---------VQGTRRILVYEYVENNS---LDRVLLGATKANIKLNWE 53
++H N+V LI C +G+ LV+++ E++ L VL+ T + IK
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIK---- 128
Query: 54 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 113
+ + GL ++H I+HRD+KA+N+L+ ++ K+ DFGLA+ F
Sbjct: 129 ---RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 114 TTRIAG---TTGYLAPEYVLG 131
R T Y PE +LG
Sbjct: 183 PNRYXNRVVTLWYRPPELLLG 203
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 6 VRHPNLVELIGCCVQGTRRI--------LVYEYVENNS---LDRVLLGATKANIKLNWEK 54
++H N+V LI C LV+++ E++ L VL+ T + IK
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK----- 128
Query: 55 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 114
+ + GL ++H I+HRD+KA+N+L+ ++ K+ DFGLA+ F
Sbjct: 129 --RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 115 TRIAG---TTGYLAPEYVLG 131
R T Y PE +LG
Sbjct: 184 NRYXNRVVTLWYRPPELLLG 203
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEF---NPKIGDFGLAKLFPDNITHITT--R 116
I +G+ +LH+ +IVH D+K NILL + + KI DFG+++ I H
Sbjct: 140 ILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELRE 192
Query: 117 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 152
I GT YLAPE + +T D+++ G++ +++
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 77 IVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNI-THITTRIAGTTGYLAPEYVLGGQ 133
I+H D+K NILL Q+ K+ DFG + + T I +R Y APE +LG +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGAR 275
Query: 134 LTMKADVYSFGVLVLEIISG 153
M D++S G ++ E+++G
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 77 IVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNI-THITTRIAGTTGYLAPEYVLGGQ 133
I+H D+K NILL Q+ K+ DFG + + T I +R Y APE +LG +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGAR 275
Query: 134 LTMKADVYSFGVLVLEIISG 153
M D++S G ++ E+++G
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL- 134
+VHRDIK NIL+D + K+ DFG L D T GT Y PE++ Q
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYH 216
Query: 135 TMKADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 217 ALPATVWSLGILLYDMVCG 235
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 37/184 (20%)
Query: 8 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGI 62
HPN++ C + T R L Y +E +L+ L +K N+KL E + I
Sbjct: 68 HPNVIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 63 AKGLAFLHEELVPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDN 109
A G+A LH I+HRD+K NIL+ DQ+ + I DFGL K
Sbjct: 125 ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 110 ITHITTRI---AGTTGYLAPEYV-------LGGQLTMKADVYSFGVLVLEIISGRNSGKA 159
+ +GT+G+ APE + +LT D++S G + I+S GK
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS---KGKH 238
Query: 160 MWGQ 163
+G
Sbjct: 239 PFGD 242
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLG---- 131
+HRD+K N+LLD+ + K+ DFG K+ + + T + GT Y++PE +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 132 GQLTMKADVYSFGVLVLEIISG 153
G + D +S GV + E++ G
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLG---- 131
+HRD+K N+LLD+ + K+ DFG K+ + + T + GT Y++PE +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 247
Query: 132 GQLTMKADVYSFGVLVLEIISG 153
G + D +S GV + E++ G
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVG 269
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
++HPN+V L + LV++ V L + + + +D I +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAREYYSEADASHCIQQI 112
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTG 122
L ++ + IVHRD+K N+LL + K+ DFGLA + AGT G
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
YL+PE + D+++ GV++ ++ G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 78 VHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 137
HRD+K NIL+ + + DFG+A D GT Y APE T +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 138 ADVYSFGVLVLEIISG 153
AD+Y+ ++ E ++G
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 77 IVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYVLG---- 131
+HRD+K N+LLD+ + K+ DFG K+ + + T + GT Y++PE +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 132 GQLTMKADVYSFGVLVLEIISG 153
G + D +S GV + E++ G
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVG 274
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAK 64
++HPN+V L + L+++ V L ++ + E + C+ I +
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-----EADASHCIQQILE 132
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 121
+ H+ V VHRD+K N+LL + K+ DFGLA + + AGT
Sbjct: 133 AVLHCHQMGV---VHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTP 188
Query: 122 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
GYL+PE + D+++ GV++ ++ G
Sbjct: 189 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 6 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
++HPN+V L + LV++ V L ++ + +D I +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQQI 112
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTG 122
L ++ + IVHRD+K N+LL + K+ DFGLA + AGT G
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 123 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
YL+PE + D+++ GV++ ++ G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 3 LSNVRHPNLVELIGCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 61
LS V H N+++++ QG ++++ ++ + LD L + +L+ S I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKH--GSGLD--LFAFIDRHPRLDEPLASYIFRQ 138
Query: 62 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 121
+ + +L + I+HRDIK NI++ ++F K+ DFG A T GT
Sbjct: 139 LVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTI 193
Query: 122 GYLAPEYVLGGQLTM-KADVYSFGVLVLEIISGRN 155
Y APE ++G + +++S GV + ++ N
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 76 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG---------YLAP 126
+++HRD+K SN+L++ + K+ DFGLA++ ++ + +G Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 127 EYVL-GGQLTMKADVYSFGVLVLEIISGR 154
E +L + + DV+S G ++ E+ R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 8 HPNLVELIGCCVQ--GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 65
HPN++ ++G C L+ ++ SL VL T N ++ + + +A+G
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARG 123
Query: 66 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 125
+AFLH L P I + + ++++D++ +I ++ + A
Sbjct: 124 MAFLHT-LEPLIPRHALNSRSVMIDEDMTARI-----------SMADVKFSFQSPGRMYA 171
Query: 126 PEYVLGGQLTMK--------ADVYSFGVLVLEIIS 152
P +V L K AD++SF VL+ E+++
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 21/145 (14%)
Query: 23 RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDI 82
R LV+E + S+ L N + S + +A L FLH + I HRD+
Sbjct: 85 RFYLVFEKMRGGSI----LSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDL 137
Query: 83 KASNILLDQ--EFNP-KIGDFGLA---KLFPDNITHITTRI---AGTTGYLAPEYVLGGQ 133
K NIL + + +P KI DFGL KL D T + G+ Y+APE V
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 134 -----LTMKADVYSFGVLVLEIISG 153
+ D++S GV++ ++SG
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 35/143 (24%)
Query: 37 DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPK 96
D L K I L E I + G F+HE I+HRD+K +N LL+Q+ + K
Sbjct: 113 DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVK 169
Query: 97 IGDFGLAKLF-------------------PDN-------ITHITTRIAGTTGYLAPEYVL 130
+ DFGLA+ P N +H+ TR Y APE +L
Sbjct: 170 VCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELIL 224
Query: 131 GGQ-LTMKADVYSFGVLVLEIIS 152
+ T D++S G + E+++
Sbjct: 225 LQENYTKSIDIWSTGCIFAELLN 247
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITH 112
++I I + FLH +I HRD+K N+L +++ K+ DFG AK N
Sbjct: 112 AEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 168
Query: 113 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG-----RNSGKAMWGQMNK 166
T Y+APE + + D++S GV++ ++ G N+G+A+ M +
Sbjct: 169 TPCY---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR 224
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 124
GL LHE V VHRD+ NILL + I DF LA+ D T Y
Sbjct: 146 GLHVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYR 200
Query: 125 APEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
APE V+ + T D++S G ++ E+ + + G + Q+NK +
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITH 112
++I I + FLH +I HRD+K N+L +++ K+ DFG AK N
Sbjct: 131 AEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 187
Query: 113 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG-----RNSGKAMWGQMNK 166
T Y+APE + + D++S GV++ ++ G N+G+A+ M +
Sbjct: 188 TPCY---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR 243
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 124
GL LHE V VHRD+ NILL + I DF LA+ D T Y
Sbjct: 146 GLHVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYR 200
Query: 125 APEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 168
APE V+ + T D++S G ++ E+ + + G + Q+NK +
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 3 LSNVRH-PNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 59
L N+R PN++ L R LV+E+V N ++ T +I+
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YM 137
Query: 60 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIA 118
I K L + H I+HRD+K N+L+D E ++ D+GLA+ + + R+A
Sbjct: 138 YEILKALDYCHS---MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA 193
Query: 119 GTTGYLAPEYVLGGQL-TMKADVYSFGVLVLEII 151
+ + PE ++ Q+ D++S G ++ +I
Sbjct: 194 -SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 65 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG---- 119
G F+HE I+HRD+K +N LL+Q+ + KI DFGLA+ + D HI +
Sbjct: 143 GEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 120 -------------------TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIIS 152
T Y APE +L + T D++S G + E+++
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 190
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 191 GRSAAVWSLGILLYDMVCG 209
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 29/165 (17%)
Query: 3 LSNVRHPNLVELIGCCV--QGTRRILVYEYV---ENNSLDRVLLGATKANIKLNWEKRSD 57
L +RH N+++L+ + + +V EY LD V EKR
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP------------EKRFP 107
Query: 58 ICVG------IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT 111
+C + GL +LH + IVH+DIK N+LL KI G+A+
Sbjct: 108 VCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164
Query: 112 HITTRIAGTTGYLAPEYVLGGQLT---MKADVYSFGVLVLEIISG 153
T R + + P + G T K D++S GV + I +G
Sbjct: 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 77 IVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNI-THITTRIAGTTGYLAPEYVLGGQ 133
I+H D+K NILL Q+ K+ DFG + + I +R Y APE +LG +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF-----YRAPEVILGAR 275
Query: 134 LTMKADVYSFGVLVLEIISG 153
M D++S G ++ E+++G
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 191
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 192 GRSAAVWSLGILLYDMVCG 210
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 192
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 191
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 192 GRSAAVWSLGILLYDMVCG 210
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 192
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 239
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 240 GRSAAVWSLGILLYDMVCG 258
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 206
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 207 GRSAAVWSLGILLYDMVCG 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 207
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 221 GRSAAVWSLGILLYDMVCG 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 206
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 207 GRSAAVWSLGILLYDMVCG 225
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 207
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 77 IVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 135
++HRDIK NIL+D K+ DFG L D + T GT Y PE++ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 192
Query: 136 MK-ADVYSFGVLVLEIISG 153
+ A V+S G+L+ +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 56 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNIT 111
S+I I + + +LH +I HRD+K N+L + P K+ DFG AK + +
Sbjct: 118 SEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAK---ETTS 170
Query: 112 HIT-TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 153
H + T T Y+APE + + D++S GV++ ++ G
Sbjct: 171 HNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,643,925
Number of Sequences: 62578
Number of extensions: 311304
Number of successful extensions: 3003
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 183
Number of HSP's that attempted gapping in prelim test: 851
Number of HSP's gapped (non-prelim): 1098
length of query: 277
length of database: 14,973,337
effective HSP length: 98
effective length of query: 179
effective length of database: 8,840,693
effective search space: 1582484047
effective search space used: 1582484047
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)