BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023810
MASRYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLA
IPLPGPVDDDTTLIIDVVHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPS
GRPHGKVDVKVAVRESRYAPPGAYHTPPYGVPPSGSRDYPAPPPYGYPYGRPPQDPYYAT
APPPSGYPYGAYNAPPAYGQPSYGAYGAAPPGGYYGQVEEKKKSKFGGMGTGLAVGAVGG
ILGGLALAEGVDALEDHIADEAAEKVEDDLGYDGDDF

High Scoring Gene Products

Symbol, full name Information P value
AT5G23950 protein from Arabidopsis thaliana 4.1e-43
AT1G07310 protein from Arabidopsis thaliana 1.0e-20
AT4G01200 protein from Arabidopsis thaliana 4.2e-06
AT2G13350 protein from Arabidopsis thaliana 6.2e-06
SRC2
AT1G09070
protein from Arabidopsis thaliana 0.00035

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023810
        (277 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2172828 - symbol:AT5G23950 "AT5G23950" species...   437  4.1e-43   2
TAIR|locus:2025002 - symbol:AT1G07310 "AT1G07310" species...   244  1.0e-20   1
TAIR|locus:2124933 - symbol:AT4G01200 "AT4G01200" species...   121  4.2e-06   1
TAIR|locus:2041654 - symbol:AT2G13350 "AT2G13350" species...   123  6.2e-06   1
TAIR|locus:2036004 - symbol:SRC2 "AT1G09070" species:3702...    95  0.00035   2


>TAIR|locus:2172828 [details] [associations]
            symbol:AT5G23950 "AT5G23950" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002688 SUPFAM:SSF49562 EMBL:BT020351
            IPI:IPI00516888 RefSeq:NP_197783.2 UniGene:At.30986
            ProteinModelPortal:Q5PNU6 PaxDb:Q5PNU6 PRIDE:Q5PNU6
            EnsemblPlants:AT5G23950.1 GeneID:832460 KEGG:ath:AT5G23950
            eggNOG:NOG237651 OMA:GASYVED ProtClustDB:CLSN2918243
            Genevestigator:Q5PNU6 Uniprot:Q5PNU6
        Length = 219

 Score = 437 (158.9 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
 Identities = 86/147 (58%), Positives = 104/147 (70%)

Query:     6 EVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPG 65
             EVEVTI+SAKD+KNVNWR+GPN+PYAV+W+DP  K ST+VD++G+TC  W+ET  I LP 
Sbjct:     7 EVEVTISSAKDIKNVNWRNGPNKPYAVVWIDPKFKSSTRVDEDGNTCTTWNETFVIALPP 66

Query:    66 PXXXXXXXXXXXXHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPHG 125
                          HAG EE+TK LIGSA L L+DVI+DVG G     TLKLKRPSGRP G
Sbjct:    67 ANDDDDKVYINIVHAGREENTKPLIGSAHLSLRDVIDDVGFGVPFMKTLKLKRPSGRPQG 126

Query:   126 KVDVKVAVRESRYAPPGAYHTPPYGVP 152
             K+DV V VRE+    PG+ +  PYG P
Sbjct:   127 KLDVTVTVRET----PGSNYALPYGDP 149

 Score = 35 (17.4 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:   255 EDHIADEAAEKVEDDLGYDGDD 276
             +D  A  AA+  +DD   D DD
Sbjct:   196 DDAAAAAAADDDDDDDDDDDDD 217


>TAIR|locus:2025002 [details] [associations]
            symbol:AT1G07310 "AT1G07310" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 HSSP:P05696
            EMBL:AC022464 UniGene:At.32199 EMBL:AY054646 EMBL:AY081489
            IPI:IPI00524174 RefSeq:NP_563785.1 UniGene:At.23050
            ProteinModelPortal:Q9LNV0 SMR:Q9LNV0 IntAct:Q9LNV0 PaxDb:Q9LNV0
            PRIDE:Q9LNV0 EnsemblPlants:AT1G07310.1 GeneID:837242
            KEGG:ath:AT1G07310 TAIR:At1g07310 eggNOG:NOG262238
            HOGENOM:HOG000238477 InParanoid:Q9LNV0 OMA:VWNERIT PhylomeDB:Q9LNV0
            ProtClustDB:CLSN2916980 ArrayExpress:Q9LNV0 Genevestigator:Q9LNV0
            Uniprot:Q9LNV0
        Length = 352

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 53/145 (36%), Positives = 82/145 (56%)

Query:     6 EVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPG 65
             ++ VT+ SAK LKNVNWR+G  +PY VL++D +   ST+ DD     P W+E + +PL  
Sbjct:     8 DLVVTVVSAKHLKNVNWRNGDLKPYVVLYLDQDHPLSTRSDDSSSIKPVWNERITLPLTR 67

Query:    66 PXXXXXXXXXXXXHAGNEEDTKKLIGSAKLKLKDVINDVG--LGERASLTLKLKRPSGRP 123
                          H+ + +  K L+GS +  L  +I+  G  + E  + +L+L RPSGRP
Sbjct:    68 -SVHESVLNIEVFHSNSSDLAKTLVGSVRFPLARLIDSDGSMIPELIN-SLELVRPSGRP 125

Query:   124 HGKVDVKVAVRESRYAPPGAYHTPP 148
              GK+ +K+A+++    PP   H PP
Sbjct:   126 QGKIRLKLAIKDRPIPPP--QHPPP 148


>TAIR|locus:2124933 [details] [associations]
            symbol:AT4G01200 "AT4G01200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002687 GenomeReviews:CT486007_GR
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AL161491
            EMBL:AY080883 EMBL:AY114050 IPI:IPI00528057 PIR:G85015
            RefSeq:NP_192029.1 UniGene:At.34467 ProteinModelPortal:Q9M148
            SMR:Q9M148 EnsemblPlants:AT4G01200.1 GeneID:828043
            KEGG:ath:AT4G01200 TAIR:At4g01200 eggNOG:NOG299143
            HOGENOM:HOG000153213 InParanoid:Q9M148 OMA:GSENPIW PhylomeDB:Q9M148
            ProtClustDB:CLSN2685478 Genevestigator:Q9M148 Uniprot:Q9M148
        Length = 250

 Score = 121 (47.7 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 32/136 (23%), Positives = 63/136 (46%)

Query:     7 VEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPL-PG 65
             +E+ + SA+ LK    +    + YA +WVD + K  T++D  G   P W++     + P 
Sbjct:     7 LEINLISAQGLKEPTGKLRRLQTYASVWVDSSSKLRTRIDRIGSENPIWNDKFVFQVSPE 66

Query:    66 PXXXXXXXXXXXXHA-GNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPH 124
                          +A G   D   LIG+ +  + + +    +   + + L+++RPSG+ H
Sbjct:    67 FLSSETSGVSIEIYAVGYLRD--HLIGTVRFLVSNFLPTAAVKVPSLVALQIRRPSGKFH 124

Query:   125 GKVDVKVAVRESRYAP 140
             G +++   V ++   P
Sbjct:   125 GVLNIAAMVMDASELP 140


>TAIR|locus:2041654 [details] [associations]
            symbol:AT2G13350 "AT2G13350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006944 "cellular membrane
            fusion" evidence=RCA] InterPro:IPR000008 InterPro:IPR008973
            Pfam:PF00168 SMART:SM00239 EMBL:CP002685 SUPFAM:SSF49562
            EMBL:AC007209 EMBL:AC006446 EMBL:BT005348 EMBL:AK118570
            IPI:IPI00536425 PIR:A84507 RefSeq:NP_178968.1 UniGene:At.40669
            ProteinModelPortal:Q9SI42 SMR:Q9SI42 STRING:Q9SI42
            EnsemblPlants:AT2G13350.1 GeneID:815821 KEGG:ath:AT2G13350
            TAIR:At2g13350 HOGENOM:HOG000114072 InParanoid:Q9SI42 OMA:NICGIEC
            PhylomeDB:Q9SI42 ProtClustDB:CLSN2912990 ArrayExpress:Q9SI42
            Genevestigator:Q9SI42 Uniprot:Q9SI42
        Length = 401

 Score = 123 (48.4 bits), Expect = 6.2e-06, P = 6.2e-06
 Identities = 32/127 (25%), Positives = 59/127 (46%)

Query:     7 VEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGP 66
             +E+ I SA++L  V       + YA+ W+DP +K +T+VD+ G T P W++     L   
Sbjct:    10 LELNIISAQELAPVA---RCMKTYAIAWIDPERKLTTRVDNTGGTSPTWNDKFVFRLDEE 66

Query:    67 XXXXXXXXXXXXHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPHGK 126
                                    +G+ +  + D+++         +TL++ R SGRPHG 
Sbjct:    67 ALYDATSIVVIEIYALHWFKDIHVGTVQALISDLVSPSSA--MRFVTLEVLRASGRPHGL 124

Query:   127 VDVKVAV 133
             +++ V +
Sbjct:   125 LNIAVGL 131


>TAIR|locus:2036004 [details] [associations]
            symbol:SRC2 "AT1G09070" species:3702 "Arabidopsis
            thaliana" [GO:0000326 "protein storage vacuole" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0006623 "protein
            targeting to vacuole" evidence=RCA;TAS] [GO:0006612 "protein
            targeting to membrane" evidence=RCA] [GO:0006820 "anion transport"
            evidence=RCA] [GO:0006862 "nucleotide transport" evidence=RCA]
            [GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
            [GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009611
            "response to wounding" evidence=RCA] [GO:0009612 "response to
            mechanical stimulus" evidence=RCA] [GO:0009646 "response to absence
            of light" evidence=RCA] [GO:0010200 "response to chitin"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] [GO:0015696 "ammonium transport"
            evidence=RCA] [GO:0015802 "basic amino acid transport"
            evidence=RCA] [GO:0043069 "negative regulation of programmed cell
            death" evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
            [GO:0043269 "regulation of ion transport" evidence=RCA] [GO:0005886
            "plasma membrane" evidence=IDA] InterPro:IPR000008
            InterPro:IPR008973 Pfam:PF00168 SMART:SM00239 GO:GO:0005783
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            SUPFAM:SSF49562 EMBL:AC000106 GO:GO:0006623 UniGene:At.71449
            GO:GO:0000326 UniGene:At.24245 EMBL:AY045580 EMBL:AY142027
            IPI:IPI00527850 PIR:G86222 RefSeq:NP_563835.1 UniGene:At.31705
            UniGene:At.5402 UniGene:At.74046 ProteinModelPortal:O04023
            SMR:O04023 STRING:O04023 PaxDb:O04023 PRIDE:O04023
            EnsemblPlants:AT1G09070.1 GeneID:837428 KEGG:ath:AT1G09070
            TAIR:At1g09070 eggNOG:NOG246378 HOGENOM:HOG000238638
            InParanoid:O04023 OMA:QGPYGYP PhylomeDB:O04023
            ProtClustDB:CLSN2916988 Genevestigator:O04023 Uniprot:O04023
        Length = 324

 Score = 95 (38.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
 Identities = 33/145 (22%), Positives = 59/145 (40%)

Query:     7 VEVTITSAKDLKNVNWRHGPNRPYAVLWV--DPNKKCSTKVDDEGDTCPYWDETLAIPLP 64
             +++TI SA+DLK+V    G    YAV+ +  D   K  TKVD +  T P W   + + + 
Sbjct:     6 LDLTIISAEDLKDVQLI-GKQDLYAVVSINGDARTKQKTKVDKDCGTKPKWKHQMKLTVD 64

Query:    65 GPXXXXXXXXXXXXHAGNEEDT-KKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRP 123
                              +      K +G   + +K++++     E  ++T  ++ P+G+ 
Sbjct:    65 DAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNKGDEEKTVTYAVRLPNGKA 124

Query:   124 HGKVDVKVAVRES-RYAPPGAYHTP 147
              G +       E   Y      H P
Sbjct:   125 KGSLKFSFKFGEKYTYGSSSGPHAP 149

 Score = 50 (22.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
 Identities = 9/18 (50%), Positives = 9/18 (50%)

Query:   138 YAPPGAYHTPPYGVPPSG 155
             Y P G Y  P  G PP G
Sbjct:   241 YPPQGPYGYPQQGYPPQG 258


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.134   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      277       180   0.00092  109 3  11 23  0.40    33
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  168 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.82u 0.10s 14.92t   Elapsed:  00:00:01
  Total cpu time:  14.82u 0.10s 14.92t   Elapsed:  00:00:01
  Start:  Fri May 10 22:11:00 2013   End:  Fri May 10 22:11:01 2013

Back to top