Query 023810
Match_columns 277
No_of_seqs 270 out of 1726
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 13:10:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023810.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023810hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 4.7E-21 1.6E-25 152.1 13.4 123 4-137 9-132 (136)
2 2dmh_A Myoferlin; beta-sandwic 99.8 4.3E-20 1.5E-24 147.2 17.4 124 3-135 5-133 (140)
3 3b7y_A E3 ubiquitin-protein li 99.8 1.9E-20 6.3E-25 151.7 15.0 125 4-134 19-152 (153)
4 2ep6_A MCTP2 protein; beta san 99.8 2E-20 7E-25 148.0 13.1 119 4-135 12-132 (133)
5 2fk9_A Protein kinase C, ETA t 99.8 8.3E-21 2.8E-25 155.1 11.2 119 5-134 29-156 (157)
6 3m7f_B E3 ubiquitin-protein li 99.8 5.3E-20 1.8E-24 152.7 14.8 127 4-136 7-142 (176)
7 1gmi_A Protein kinase C, epsil 99.8 3.9E-20 1.3E-24 147.1 11.8 118 5-136 6-134 (136)
8 3kwu_A MUNC13-1; calcium bindi 99.8 4E-19 1.4E-23 143.0 16.8 118 5-134 17-146 (148)
9 3pyc_A E3 ubiquitin-protein li 99.8 2E-19 6.9E-24 142.1 14.2 121 4-134 4-132 (132)
10 2nq3_A Itchy homolog E3 ubiqui 99.8 2.7E-19 9.4E-24 148.4 14.6 125 5-137 36-163 (173)
11 1rlw_A Phospholipase A2, CALB 99.8 6.3E-19 2.2E-23 137.8 13.8 116 4-132 2-122 (126)
12 2cjt_A UNC-13 homolog A, MUNC1 99.8 3.1E-19 1.1E-23 141.5 11.0 120 1-133 2-130 (131)
13 1ugk_A Synaptotagmin IV, KIAA1 99.8 5.1E-18 1.7E-22 135.0 13.5 110 4-118 21-133 (138)
14 3f04_A Synaptotagmin-1; C2A, c 99.8 2.8E-18 9.5E-23 137.2 11.1 107 4-117 33-141 (143)
15 1rsy_A Synaptotagmin I; calciu 99.8 4.5E-18 1.5E-22 137.6 12.4 107 5-118 42-150 (152)
16 2d8k_A Synaptotagmin VII; exoc 99.8 5.3E-18 1.8E-22 135.3 12.6 109 4-119 25-136 (141)
17 2b3r_A Phosphatidylinositol-4- 99.8 6.8E-18 2.3E-22 134.0 11.9 106 5-118 20-130 (134)
18 1v27_A Regulating synaptic mem 99.8 5.8E-18 2E-22 134.7 11.4 112 5-124 21-140 (141)
19 3fbk_A RGS3, RGP3, regulator o 99.7 3.9E-18 1.3E-22 138.2 9.7 118 4-129 26-148 (153)
20 2z0u_A WW domain-containing pr 99.7 1.3E-18 4.6E-23 141.7 6.4 108 4-117 42-154 (155)
21 2cjs_A UNC-13 homolog A, MUNC1 99.7 2.4E-17 8.4E-22 135.9 13.9 119 5-135 14-141 (167)
22 3fdw_A Synaptotagmin-like prot 99.7 7.6E-18 2.6E-22 135.6 10.4 109 5-119 23-135 (148)
23 2dmg_A KIAA1228 protein; beta- 99.7 4.2E-18 1.4E-22 136.0 8.7 112 4-122 23-139 (142)
24 1a25_A CALB, protein kinase C 99.7 1.9E-17 6.5E-22 133.4 12.2 105 5-118 31-139 (149)
25 2chd_A Rabphilin-3A, exophilin 99.7 7.6E-18 2.6E-22 134.5 9.5 108 4-118 28-140 (142)
26 2bwq_A Regulating synaptic mem 99.7 1.5E-17 5.3E-22 130.4 11.0 105 4-116 17-128 (129)
27 2r83_A Synaptotagmin-1; C2A-C2 99.7 8.4E-17 2.9E-21 142.6 16.8 125 4-135 18-147 (284)
28 1wfm_A Synaptotagmin XIII; C2 99.7 3.2E-17 1.1E-21 130.6 12.3 106 4-119 25-133 (138)
29 2enp_A B/K protein; C2 type 1, 99.7 1.1E-17 3.7E-22 134.5 9.6 109 4-118 25-141 (147)
30 1w15_A Synaptotagmin IV; metal 99.7 4E-17 1.4E-21 132.0 12.3 92 5-99 30-125 (153)
31 1rh8_A Piccolo protein; beta-s 99.7 4.1E-18 1.4E-22 136.0 6.2 108 5-119 18-139 (142)
32 3rdl_A Protein kinase C alpha 99.7 3.5E-17 1.2E-21 129.5 11.5 105 5-118 16-124 (137)
33 1tjx_A Similar to synaptotagmi 99.7 3.9E-17 1.4E-21 133.0 11.6 109 5-118 25-147 (159)
34 3n5a_A Synaptotagmin-7; calciu 99.7 2.9E-17 9.8E-22 130.1 10.5 95 4-101 15-113 (138)
35 2cm5_A Rabphilin-3A; protein t 99.7 6.2E-17 2.1E-21 132.8 12.7 95 4-101 36-134 (166)
36 2q3x_A Regulating synaptic mem 99.7 5.3E-17 1.8E-21 134.1 12.0 107 5-120 30-141 (171)
37 1dqv_A Synaptotagmin III; beta 99.7 2.8E-16 9.7E-21 140.5 13.7 126 4-135 19-149 (296)
38 3l9b_A Otoferlin; C2-domain, b 99.7 5.4E-16 1.9E-20 123.1 13.5 119 5-136 21-141 (144)
39 3jzy_A Intersectin 2; C2 domai 99.6 8.2E-16 2.8E-20 147.0 13.2 121 5-134 387-507 (510)
40 1djx_A PLC-D1, phosphoinositid 99.6 1.5E-14 5.1E-19 141.7 16.1 121 4-135 496-624 (624)
41 3nsj_A Perforin-1; pore formin 99.6 1.7E-14 5.7E-19 138.9 14.4 112 5-136 394-505 (540)
42 2r83_A Synaptotagmin-1; C2A-C2 99.5 2.9E-14 1E-18 126.2 12.3 111 5-118 150-272 (284)
43 1cjy_A CPLA2, protein (cytosol 99.5 1.6E-13 5.5E-18 136.1 11.1 104 4-117 17-125 (749)
44 3bxj_A RAS GTPase-activating p 99.5 6.2E-15 2.1E-19 140.5 0.4 118 5-136 11-158 (483)
45 1dqv_A Synaptotagmin III; beta 99.4 5.5E-14 1.9E-18 125.6 5.1 94 5-101 152-249 (296)
46 3ohm_B 1-phosphatidylinositol- 99.4 6.3E-12 2.1E-16 126.6 14.7 113 5-136 725-846 (885)
47 2zkm_X 1-phosphatidylinositol- 99.3 2.3E-11 7.8E-16 122.1 15.7 111 5-134 678-798 (799)
48 3qr0_A Phospholipase C-beta (P 99.3 2E-11 7E-16 122.2 15.2 113 5-136 650-772 (816)
49 3pfq_A PKC-B, PKC-beta, protei 99.3 1.4E-11 4.8E-16 121.8 11.5 106 5-119 172-281 (674)
50 1yrk_A NPKC-delta, protein kin 99.2 3.3E-10 1.1E-14 87.4 13.9 114 6-134 7-124 (126)
51 2enj_A NPKC-theta, protein kin 99.1 4.4E-10 1.5E-14 87.9 11.1 116 6-135 11-130 (138)
52 1dx0_A Prion protein; brain, r 98.4 6.3E-09 2.1E-13 86.2 -3.4 31 223-253 95-125 (219)
53 2yrb_A Protein fantom; beta sa 97.2 0.0017 5.8E-08 52.0 8.6 125 5-136 18-151 (156)
54 3l4c_A Dedicator of cytokinesi 96.7 0.033 1.1E-06 47.0 13.2 58 40-98 78-138 (220)
55 3heq_A Major prion protein; ce 96.0 0.00037 1.3E-08 53.0 -2.7 46 220-265 14-59 (142)
56 2wxf_A Phosphatidylinositol-4, 93.2 0.51 1.7E-05 48.0 10.9 91 5-100 217-324 (940)
57 2lbg_A Major prion protein; co 93.2 0.094 3.2E-06 28.5 3.0 21 232-252 6-26 (27)
58 1dx0_A Prion protein; brain, r 93.1 0.006 2E-07 50.6 -2.7 46 221-267 90-139 (219)
59 3hhm_A Phosphatidylinositol-4, 92.4 0.66 2.3E-05 47.8 10.4 94 5-102 355-457 (1091)
60 1tpx_A Prion protein, major pr 90.8 0.013 4.5E-07 44.3 -2.9 35 232-266 5-39 (121)
61 2y3a_A Phosphatidylinositol-4, 87.2 0.63 2.2E-05 48.0 5.4 72 5-81 353-430 (1092)
62 1e7u_A Phosphatidylinositol 3- 86.8 1.3 4.4E-05 45.2 7.4 94 5-101 218-331 (961)
63 1xu0_A Prion protein, XLPRP; a 86.3 0.035 1.2E-06 42.4 -3.3 35 232-266 19-53 (130)
64 2qzq_A Axin interactor, dorsal 75.4 5.5 0.00019 31.3 5.6 94 6-103 15-116 (152)
65 1u3m_A CHPRP, prion-like prote 71.3 0.087 3E-06 39.2 -5.3 31 236-266 1-31 (117)
66 1u5l_A Prion protein; pRNP, PR 62.4 0.19 6.5E-06 37.0 -4.9 30 237-266 2-31 (108)
67 2k1k_A Ephrin type-A receptor 58.0 11 0.00037 22.3 3.2 19 228-246 7-25 (38)
68 2knc_B Integrin beta-3; transm 36.3 51 0.0017 22.7 4.3 9 232-240 12-20 (79)
69 1q5l_A Chaperone protein DNAK; 32.5 1.6E+02 0.0053 22.1 9.8 67 56-132 49-117 (135)
70 3dob_A Heat shock 70 kDa prote 30.0 1.9E+02 0.0064 22.2 9.5 74 48-132 25-100 (152)
71 3h0x_A 78 kDa glucose-regulate 28.7 1.9E+02 0.0067 22.0 9.4 55 70-132 44-100 (152)
72 3dqg_A Heat shock 70 kDa prote 25.7 2.2E+02 0.0076 21.7 9.6 74 48-132 25-100 (151)
73 3n8e_A Stress-70 protein, mito 22.3 2.9E+02 0.0099 21.8 8.8 79 43-132 40-120 (182)
74 3iz5_t 60S acidic ribosomal pr 20.1 23 0.0008 26.1 0.2 9 265-273 99-107 (110)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.86 E-value=4.7e-21 Score=152.09 Aligned_cols=123 Identities=21% Similarity=0.334 Sum_probs=104.3
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCC-CCCCCccceeEEEecCCCCCCCceEEEEEEEccC
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDE-GDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGN 82 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~-~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~ 82 (277)
...|+|+|++|++|...+.. +.+||||+++++ ..+.+|++ ++ ++.||+|||+|.|.+.. ....|.|+|||++.
T Consensus 9 ~~~L~v~v~~a~~L~~~d~~-g~~dpyv~v~~~-~~~~kT~~-~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLEDADFL-NNMDPYVQLTCR-TQDQKSNV-AEGMGTTPEWNETFIFTVSE---GTTELKAKIFDKDV 82 (136)
T ss_dssp EEEEEEEEEEEEECSSCCSS-CSSCCCEEEESS-SCEEECCC-CTTCCSSCEEEEEEEEEEES---SCCEEEEEECCSSS
T ss_pred cEEEEEEEEeccCCCCcccC-CCcCceEEEEEC-CccceeEe-ccCCCCCCccCcEEEEEECC---CCCEEEEEEEECCC
Confidence 36899999999999988865 899999999996 45779998 55 89999999999999975 35789999999986
Q ss_pred CCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCCceEEEEEEEEEecC
Q 023810 83 EEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPHGKVDVKVAVRESR 137 (277)
Q Consensus 83 ~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~~G~L~l~v~~~~~~ 137 (277)
..+++|||++.|+|.++... ++....||.|. +.++..|+|+|+++|.+..
T Consensus 83 -~~~d~~lG~~~i~l~~l~~~---~~~~~~w~~L~-~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 83 -GTEDDAVGEATIPLEPVFVE---GSIPPTAYNVV-KDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp -CTTTCCSEEEEEESHHHHHH---SEEEEEEEEEE-ETTEEEEEEEEEEEEEECC
T ss_pred -CCCCceEEEEEEEHHHhccC---CCCCcEEEEee-cCCccCEEEEEEEEEEeCC
Confidence 46889999999999998654 23456789987 5677899999999998763
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=4.3e-20 Score=147.18 Aligned_cols=124 Identities=27% Similarity=0.353 Sum_probs=101.3
Q ss_pred CceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCC-CCceEEEEEEEcc
Q 023810 3 SRYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVD-DDTTLIIDVVHAG 81 (277)
Q Consensus 3 ~~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l-~~~~L~v~V~d~~ 81 (277)
....|+|+|++|++|...+. +.+||||+++++ ..+.+|++ ++++.||+|||+|.|.+....+ ....|.|+|||++
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~--g~~dpyv~v~~~-~~~~kT~v-~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF--GKPDPIVSVIFK-DEKKKTKK-VDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS--SCCCEEEEEECS-SCEEECCC-CCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCcEEEEEEEEeeCCCCCCC--CCCCeEEEEEEC-CEeEEeee-ecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 45689999999999998874 899999999996 56789999 7889999999999999975322 3578999999999
Q ss_pred CCCCCCceeEEEEEecceeccccCCCceeeEEEE---eecCCC-CCceEEEEEEEEEe
Q 023810 82 NEEDTKKLIGSAKLKLKDVINDVGLGERASLTLK---LKRPSG-RPHGKVDVKVAVRE 135 (277)
Q Consensus 82 ~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~---L~~~sg-~~~G~L~l~v~~~~ 135 (277)
. .++++|||++.|+|.+|.... ....|+. |....+ ..+|+|+|+++|.+
T Consensus 81 ~-~~~~~~lG~~~i~l~~l~~~~----~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 81 T-IGQNKLIGTATVALKDLTGDQ----SRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp C-SSSCCCCEEEEEEGGGTCSSS----CEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred C-CCCCceEEEEEEEHHHhccCC----CceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 6 468899999999999986543 2345555 655443 46799999999965
No 3
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.85 E-value=1.9e-20 Score=151.65 Aligned_cols=125 Identities=15% Similarity=0.214 Sum_probs=96.3
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCC-----CeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPN-----KKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVV 78 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~-----~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~ 78 (277)
...|+|+|++|++|...+.. +++||||++++... .+.+|++ ++++.||+|||+|.|.+.. ....|.|+||
T Consensus 19 ~~~L~V~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~---~~~~l~~~V~ 93 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDIL-GASDPYVRVTLYDPMNGVLTSVQTKT-IKKSLNPKWNEEILFRVHP---QQHRLLFEVF 93 (153)
T ss_dssp CEEEEEEEEEEESCC--------CCEEEEEEEEETTTEEEEEEECCC-CSSCSSCCCCEEEEEEECT---TTCEEEEEEE
T ss_pred ccEEEEEEEEeeCCCCCCCC-CCCCcEEEEEEECCCCccceeeeCcc-ccCCCCCCCCCEEEEEecC---CCCEEEEEEE
Confidence 46899999999999988754 89999999999532 4679998 7789999999999999975 3568999999
Q ss_pred EccCCCCCCceeEEEEEecceeccccCCC--ceeeEEEEeecC--CCCCceEEEEEEEEE
Q 023810 79 HAGNEEDTKKLIGSAKLKLKDVINDVGLG--ERASLTLKLKRP--SGRPHGKVDVKVAVR 134 (277)
Q Consensus 79 d~~~~~~~d~~iG~~~v~L~~l~~~~~~~--~~~~~~~~L~~~--sg~~~G~L~l~v~~~ 134 (277)
|++. .++++|||++.|+|.+|....... .....||.|... ..+.+|+|+|+++|.
T Consensus 94 d~d~-~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 94 DENR-LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp ECCS-SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred ECCC-CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 9986 468999999999999988764321 112478888543 456789999999985
No 4
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=2e-20 Score=148.02 Aligned_cols=119 Identities=16% Similarity=0.293 Sum_probs=99.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccCC
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGNE 83 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~~ 83 (277)
...|+|+|++|++|...+.. +.+||||+++++ ..+.+|++ ++++.||+|||+|.|.+.. ....|.|+|||++.
T Consensus 12 ~~~L~v~v~~a~~L~~~d~~-g~~dpyv~v~~~-~~~~kT~~-~~~t~nP~wne~f~f~~~~---~~~~l~i~V~d~d~- 84 (133)
T 2ep6_A 12 VGILQVKVLKAADLLAADFS-GKSDPFCLLELG-NDRLQTHT-VYKNLNPEWNKVFTFPIKD---IHDVLEVTVFDEDG- 84 (133)
T ss_dssp SEEEEEEEEEEESCCCSSSS-SCCCEEEEEEET-TEEEECCC-CSSCSSCCCCEEEEEEESC---TTCEEEEEEEEEET-
T ss_pred ceEEEEEEEeeECCCCCCCC-CCcCeEEEEEEC-CEEEEeee-ecCCCCCccccEEEEEecC---CCCEEEEEEEECCC-
Confidence 47899999999999988865 899999999995 56789999 7789999999999999975 24689999999986
Q ss_pred CCCCceeEEEEEecceeccccCCCceeeEEEEeecC--CCCCceEEEEEEEEEe
Q 023810 84 EDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRP--SGRPHGKVDVKVAVRE 135 (277)
Q Consensus 84 ~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~--sg~~~G~L~l~v~~~~ 135 (277)
.++++|||++.|+|.++.... ..|++|... .++.+|+|+|+++|.-
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~~------~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDGQ------PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSSC------CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCCCeeEEEEEEHHHccCCC------ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 467899999999999986431 367888654 3467899999999864
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.84 E-value=8.3e-21 Score=155.10 Aligned_cols=119 Identities=19% Similarity=0.308 Sum_probs=97.1
Q ss_pred eEEEEEEEEeeCCCCCCCC---------CCCCCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEE
Q 023810 5 YEVEVTITSAKDLKNVNWR---------HGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLII 75 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~---------~g~~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v 75 (277)
..|+|+|++|++|...++. .+.+||||+++++.....+|++ +++++||+|||+|.|.|.. ...|.|
T Consensus 29 g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v-~~ktlnP~WNE~F~f~v~~----~~~L~~ 103 (157)
T 2fk9_A 29 GYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTST-KQKTNKPTYNEEFCANVTD----GGHLEL 103 (157)
T ss_dssp EEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCC-CSSCSSCEEEEEEEEEEEE----ECEEEE
T ss_pred cEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeee-cCCCCCCccCcEEEEEcCC----CCEEEE
Confidence 6899999999999876521 2568999999997545579998 7889999999999999964 358999
Q ss_pred EEEEccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCCceEEEEEEEEE
Q 023810 76 DVVHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPHGKVDVKVAVR 134 (277)
Q Consensus 76 ~V~d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~~G~L~l~v~~~ 134 (277)
+|||++. .++++|||++.|+|.+|....+.+.....||+|.. +|+|.|+++|.
T Consensus 104 ~V~D~d~-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-----~G~i~l~l~~~ 156 (157)
T 2fk9_A 104 AVFHETP-LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-----EGKVFVVITLT 156 (157)
T ss_dssp EEEECCS-SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-----SCEEEEEEEEC
T ss_pred EEEECCC-CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-----CcEEEEEEEEE
Confidence 9999986 47899999999999998865212344678999843 79999999874
No 6
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.83 E-value=5.3e-20 Score=152.69 Aligned_cols=127 Identities=14% Similarity=0.201 Sum_probs=96.3
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC-C----CeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP-N----KKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVV 78 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~-~----~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~ 78 (277)
..+|+|+|++|++|...+.. +++||||++++.. . .+++|++ +++++||+|||+|.|.+.. ....|.|+||
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~-g~~DPyv~v~l~~~~~~~~~~~kT~v-~~~t~nP~Wne~f~f~v~~---~~~~L~~~V~ 81 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDIL-GASDPYVRVTLYDPMSGILTSVQTKT-IKKSLNPKWNEEILFRVLP---QRHRILFEVF 81 (176)
T ss_dssp CEEEEEEEEEEESCC---CC-CCCCEEEEEEEEETTTEEEEEEECCC-CSSCSSCEEEEEEEEEECT---TTCEEEEEEE
T ss_pred cEEEEEEEEEeeCCCCcCCC-CCcCcEEEEEEECCCCCcccceeCce-ECCCCCCcccceEEEEEcC---CCCEEEEEEE
Confidence 36899999999999988764 8999999999942 2 4579999 7789999999999999975 3468999999
Q ss_pred EccCCCCCCceeEEEEEecceeccccCCC--ceeeEEEEeec--CCCCCceEEEEEEEEEec
Q 023810 79 HAGNEEDTKKLIGSAKLKLKDVINDVGLG--ERASLTLKLKR--PSGRPHGKVDVKVAVRES 136 (277)
Q Consensus 79 d~~~~~~~d~~iG~~~v~L~~l~~~~~~~--~~~~~~~~L~~--~sg~~~G~L~l~v~~~~~ 136 (277)
|++. .++++|||++.|+|.+|....... .....||.|.. ..++.+|+|.|+++|.+.
T Consensus 82 d~d~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 82 DENR-LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp ECC-----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred ECCC-CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 9986 468899999999999998664321 11236888864 356678999999999765
No 7
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.83 E-value=3.9e-20 Score=147.13 Aligned_cols=118 Identities=19% Similarity=0.339 Sum_probs=96.7
Q ss_pred eEEEEEEEEeeCCCCCCCCCCC-----------CCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGP-----------NRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTL 73 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~-----------~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L 73 (277)
..|+|+|++|++|...+.+ ++ +||||+++++.....+|++ +.++.||+|||+|.|.+.. ...|
T Consensus 6 g~L~v~v~~a~~L~~~d~~-~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~-~~~t~nP~WnE~f~f~v~~----~~~L 79 (136)
T 1gmi_A 6 GLLKIKICEAVSLKPTAWS-LRDAVGPRPQTFLLDPYIALNVDDSRIGQTAT-KQKTNSPAWHDEFVTDVCN----GRKI 79 (136)
T ss_dssp EEEEEEEEEEESCCCCHHH-HCC-CCSSCCCCCCCEEEEEEETTEEEEECCC-CSSCSSCEEEEEEEEEEEE----ECEE
T ss_pred eEEEEEEEeCcCCCCcccc-cccccccccCCcCcCcEEEEEECCeEeeeeeE-ECCCcCCccCCEEEEEecC----CCEE
Confidence 6899999999999977643 33 8999999997555568888 7789999999999999965 2689
Q ss_pred EEEEEEccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCCceEEEEEEEEEec
Q 023810 74 IIDVVHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPHGKVDVKVAVRES 136 (277)
Q Consensus 74 ~v~V~d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~~G~L~l~v~~~~~ 136 (277)
.|+|||++. .++++|||++.|+|.++.... ......|+.|. .+|+|.|+++|...
T Consensus 80 ~~~V~d~d~-~~~dd~iG~~~i~l~~l~~~~--~~~~~~w~~L~-----~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 80 ELAVFHDAP-IGYDDFVANCTIQFEELLQNG--SRHFEDWIDLE-----PEGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEEECCS-SSSCEEEEEEEEEHHHHTSTT--CSEEEEEEECB-----SSCEEEEEEEEEEE
T ss_pred EEEEEeCCC-CCCCCEEEEEEEEHHHhcccC--CCCccEEEEcC-----CCeEEEEEEEEEec
Confidence 999999996 468899999999999988653 12346788874 37999999999753
No 8
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=4e-19 Score=142.99 Aligned_cols=118 Identities=16% Similarity=0.392 Sum_probs=98.3
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccCC-
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGNE- 83 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~~- 83 (277)
..|+|+|++|++|...+.. +.+||||+++++ ..+.+|++ +.++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 17 ~~L~V~v~~a~~L~~~d~~-g~~dpyv~v~~~-~~~~kT~~-~~~t~nP~Wne~f~f~v~~---~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKT-GSSDPYVTVQVG-KTKKRTKT-IYGNLNPVWEENFHFECHN---SSDRIKVRVLDEDDDI 90 (148)
T ss_dssp EEEEEEEEEEESCCCCSTT-SCCCEEEEEEET-TEEEECCC-CCSCSSCEEEEEEEEEECS---TTCEEEEEEEECCCSH
T ss_pred cEEEEEEEeeeCCCCCCCC-CCcCeEEEEEEC-CEEEECCc-cCCCCCCCcccEEEEEecC---CCCEEEEEEEECCCCc
Confidence 5899999999999988754 899999999995 67889999 7889999999999999975 246899999999852
Q ss_pred ---------CCCCceeEEEEEecceeccccCCCceeeEEEEeecC--CCCCceEEEEEEEEE
Q 023810 84 ---------EDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRP--SGRPHGKVDVKVAVR 134 (277)
Q Consensus 84 ---------~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~--sg~~~G~L~l~v~~~ 134 (277)
.+.++|||++.|+|.++.. ....||.|... ..+.+|+|.|+++|.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~~------~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLSG------EMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCCS------EEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHCcC------CCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 1578999999999999832 24578888643 345689999999985
No 9
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.82 E-value=2e-19 Score=142.07 Aligned_cols=121 Identities=18% Similarity=0.267 Sum_probs=95.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC-CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccC
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP-NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGN 82 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~-~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~ 82 (277)
...|+|+|++|++|...+.. +.+||||+++++. ..+.+|++ +++++||+|||+|.|.+.. ...|.|+|||++.
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~-g~sDpyv~v~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~----~~~l~~~v~d~d~ 77 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFF-RLPDPFAKIVVDGSGQCHSTDT-VKNTLDPKWNQHYDLYVGK----TDSITISVWNHKK 77 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTT-CCCCEEEEEEETTTCCEEECCC-CSSCSSCEEEEEEEEEEET----TCCEEEEEEEGGG
T ss_pred eEEEEEEEEEeECCCCCCCC-CCcCeEEEEEECCCCceEECCc-cCCCCCCCccCEEEEEeCC----CCEEEEEEEECCC
Confidence 35799999999999988865 8999999999964 47789999 7899999999999999965 2359999999986
Q ss_pred CCCC---CceeEEEEEecceeccccCCCceeeEEEEeecC----CCCCceEEEEEEEEE
Q 023810 83 EEDT---KKLIGSAKLKLKDVINDVGLGERASLTLKLKRP----SGRPHGKVDVKVAVR 134 (277)
Q Consensus 83 ~~~~---d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~----sg~~~G~L~l~v~~~ 134 (277)
+ .+ ++|||++.|+|.+|......+ ..+++|... ..+.+|+|.|+++.+
T Consensus 78 ~-~~~~~d~~lG~~~i~l~~l~~~~~~~---~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 78 I-HKKQGAGFLGCVRLLSNAISRLKDTG---YQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp T-TSSTTTTEEEEEEECHHHHHHHTTSC---CEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred C-CCCCCCCceEEEEEeHHHhhcccccC---cEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 4 33 789999999999885443222 345666443 234689999999863
No 10
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=2.7e-19 Score=148.41 Aligned_cols=125 Identities=19% Similarity=0.253 Sum_probs=100.2
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccCCC
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGNEE 84 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~~~ 84 (277)
..|+|+|++|++|...... +.+||||+++++. .+.+|++ +++++||+|||+|.|.+.. ...|.|+|||++. .
T Consensus 36 ~~L~V~V~~A~~L~~~~~~-~~sDPYv~v~~~~-~~~kT~v-~~~tlnP~Wne~f~f~v~~----~~~L~~~V~D~d~-~ 107 (173)
T 2nq3_A 36 SQLQITVISAKLKENKKNW-FGPSPYVEVTVDG-QSKKTEK-CNNTNSPKWKQPLTVIVTP----VSKLHFRVWSHQT-L 107 (173)
T ss_dssp EEEEEEEEEEEECCCC--C-CCCCEEEEEEETT-EEEECCC-CSSCSSCEEEEEEEEEECT----TCEEEEEEEECCS-S
T ss_pred eEEEEEEEEeECCCCcccC-CCCCeEEEEEECC-EEeEccc-cCCCCCCeECCEEEEEeCC----CCEEEEEEEECCC-C
Confidence 5799999999999843323 4599999999964 7889999 7789999999999999953 5789999999996 4
Q ss_pred CCCceeEEEEEecceeccccCCC-ceeeEEEEeecC--CCCCceEEEEEEEEEecC
Q 023810 85 DTKKLIGSAKLKLKDVINDVGLG-ERASLTLKLKRP--SGRPHGKVDVKVAVRESR 137 (277)
Q Consensus 85 ~~d~~iG~~~v~L~~l~~~~~~~-~~~~~~~~L~~~--sg~~~G~L~l~v~~~~~~ 137 (277)
+.++|||++.|+|.+|....... +...+|++|... ..+..|+|.|++++..-+
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEECC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeecc
Confidence 68899999999999987653211 223678888664 345689999999988653
No 11
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.80 E-value=6.3e-19 Score=137.81 Aligned_cols=116 Identities=16% Similarity=0.322 Sum_probs=91.2
Q ss_pred ceEEEEEEEEeeCCCCC---CCCCCCCCcEEEEEECC--CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNV---NWRHGPNRPYAVLWVDP--NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVV 78 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~---~~~~g~~dpYv~v~ld~--~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~ 78 (277)
...|+|+|++|++|... +.. +++||||++++.+ ..+.+|++ ++++.||+|||+|.|.+... +...|.|+||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~-g~~dpyv~v~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~--~~~~l~i~V~ 77 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDML-DTPDPYVELFISTTPDSRKRTRH-FNNDINPVWNETFEFILDPN--QENVLEITLM 77 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHH-CCCCEEEEEECTTSTTCCEECCC-CTTCSSCEEEEEEEEEECTT--SCCEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccC-CCCCCEEEEEEccCCCceEEccc-cCCCCCCcccceEEEEecCC--CCCEEEEEEE
Confidence 46899999999999873 433 7899999999964 47789999 77899999999999999642 3578999999
Q ss_pred EccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCCceEEEEEEE
Q 023810 79 HAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPHGKVDVKVA 132 (277)
Q Consensus 79 d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~~G~L~l~v~ 132 (277)
|++.. ++++||++.|+|.+|.. +.....|+.|.. ..+|+|.|++.
T Consensus 78 d~d~~--~~~~iG~~~i~l~~l~~----~~~~~~~~~L~~---~~~g~i~~~le 122 (126)
T 1rlw_A 78 DANYV--MDETLGTATFTVSSMKV----GEKKEVPFIFNQ---VTEMVLEMSLE 122 (126)
T ss_dssp ECCSS--CCEEEEEEEEEGGGSCT----TCEEEEEEEETT---TEEEEEEEEEE
T ss_pred ECCCC--CCceeEEEEEEHHHccC----CCcEEEEEEcCC---CceEEEEEEEE
Confidence 99863 58899999999999864 344578898843 23444444443
No 12
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.80 E-value=3.1e-19 Score=141.46 Aligned_cols=120 Identities=15% Similarity=0.165 Sum_probs=85.4
Q ss_pred CCCceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 1 MASRYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 1 m~~~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
|+.. .|+|+|++|++|.. ++.+||||+++. .+.+|++..+++.||+|||+|.|.+.. ....|.|+|||+
T Consensus 2 ~~~~-~L~V~V~~A~~l~~----~g~~DPYv~v~~---~~~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~ 70 (131)
T 2cjt_A 2 GVMS-LLCVGVKKAKFDGA----QEKFNTYVTLKV---QNVKSTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNK 70 (131)
T ss_dssp CCCE-EEEEEEEEEECSSC----GGGCEEEEEEEE---TTEEEECCCEESSSCEEEEEEEEEECC---CSSEEEEEEEEC
T ss_pred Ccce-EEEEEEEEeECCCC----CCCcCeEEEEEe---cCEEEeEecCCCCCceECCEEEEEEeC---CCCeEEEEEEEC
Confidence 5554 89999999998852 378999999993 234555534578999999999999975 245799999999
Q ss_pred cCCCCCCceeEEEEEecceeccccCCC--ceeeEEEEeecCCCCCceE-------EEEEEEE
Q 023810 81 GNEEDTKKLIGSAKLKLKDVINDVGLG--ERASLTLKLKRPSGRPHGK-------VDVKVAV 133 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~~~~~~~--~~~~~~~~L~~~sg~~~G~-------L~l~v~~ 133 (277)
+ + ..|+|||++.|+|++|......+ .|..+++.+..++++.+|+ |.++++|
T Consensus 71 d-~-~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 71 G-L-IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp C-S-SCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred C-C-CCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 8 4 68999999999999987654323 4556677766667776666 8888776
No 13
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=5.1e-18 Score=134.97 Aligned_cols=110 Identities=17% Similarity=0.224 Sum_probs=88.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC--CCCeEEeeecCCCCCCCccceeEEEe-cCCCCCCCceEEEEEEEc
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD--PNKKCSTKVDDEGDTCPYWDETLAIP-LPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld--~~~~~~T~v~~~~~~nP~WnE~f~f~-v~~~~l~~~~L~v~V~d~ 80 (277)
...|+|+|++|++|...+...+.+||||++++. ...+.+|++ ++++.||+|||+|.|. +....+....|.|+|||+
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRV-LRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCC-CSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCc-CcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 357999999999999877533789999999994 346889999 7789999999999996 765444557899999999
Q ss_pred cCCCCCCceeEEEEEecceeccccCCCceeeEEEEeec
Q 023810 81 GNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKR 118 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~ 118 (277)
+. ..+++|||++.|+|.+|.... .....|+.|..
T Consensus 100 d~-~~~~~~lG~~~i~l~~l~~~~---~~~~~~~~l~~ 133 (138)
T 1ugk_A 100 DR-FSRDDIIGEVLIPLSGIELSE---GKMLMNREIIS 133 (138)
T ss_dssp CS-SCCCCCCEEEEEECTTCCCTT---CCEEEEEECBS
T ss_pred CC-CCCCcEEEEEEEehhHccCCC---Ccchhhhhhhc
Confidence 86 468899999999999987652 23456777754
No 14
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.76 E-value=2.8e-18 Score=137.22 Aligned_cols=107 Identities=22% Similarity=0.320 Sum_probs=88.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEE--CCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEcc
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWV--DPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAG 81 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~l--d~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~ 81 (277)
...|+|+|++|++|...+.. +.+||||++++ +...+.+|++ ++++.||+|||+|.|.+....+....|.|+|||++
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~-g~~dpyv~v~l~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMG-GTSDPYVKVFLLPDKKKKFETKV-HRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 110 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGG-BCCCEEEEEEEESCCSCCEECCC-CCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCEEEEEEEEecCCCCCCCC-CCcCcEEEEEEECCCCccEECcc-CcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCC
Confidence 35899999999999987754 89999999999 3356789999 78899999999999998753344578999999999
Q ss_pred CCCCCCceeEEEEEecceeccccCCCceeeEEEEee
Q 023810 82 NEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLK 117 (277)
Q Consensus 82 ~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~ 117 (277)
. ..+++|||++.|+|.++... .....|+.|.
T Consensus 111 ~-~~~~~~iG~~~i~l~~l~~~----~~~~~W~~L~ 141 (143)
T 3f04_A 111 R-FSKHDIIGEFKVPMNTVDFG----HVTEEWRDLQ 141 (143)
T ss_dssp S-SSCCEEEEEEEEEGGGCCTT----SCEEEEEECB
T ss_pred C-CCCCceEEEEEEEHHHccCC----CCcceEEECc
Confidence 6 46889999999999998653 2356788874
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=4.5e-18 Score=137.63 Aligned_cols=107 Identities=21% Similarity=0.291 Sum_probs=88.6
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC--CCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccC
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD--PNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGN 82 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld--~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~ 82 (277)
..|+|+|++|++|...+.. +.+||||++++. ...+.+|++ ++++.||+|||+|.|.|....+....|.|+|||++.
T Consensus 42 ~~L~V~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 42 NQLLVGIIQAAELPALDMG-GTSDPYVKVFLLPDKKKKFETKV-HRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp TEEEEEEEEEESCCCCSTT-SCCCEEEEEEEETTCCSCEECCC-CTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CEEEEEEEEeECCCCccCC-CCcCeEEEEEEEcCCCceEeccc-cCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC
Confidence 5899999999999988754 899999999993 346789999 778999999999999986533345789999999996
Q ss_pred CCCCCceeEEEEEecceeccccCCCceeeEEEEeec
Q 023810 83 EEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKR 118 (277)
Q Consensus 83 ~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~ 118 (277)
..+++|||++.|+|.++... .....||.|..
T Consensus 120 -~~~~~~iG~~~i~l~~l~~~----~~~~~W~~L~~ 150 (152)
T 1rsy_A 120 -FSKHDIIGEFKVPMNTVDFG----HVTEEWRDLQS 150 (152)
T ss_dssp -SSCCEEEEEEEEEGGGCCCS----SCEEEEEECBC
T ss_pred -CCCCcEEEEEEEEchhccCC----CCcceEEECCC
Confidence 46889999999999998543 33567888854
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=5.3e-18 Score=135.34 Aligned_cols=109 Identities=20% Similarity=0.274 Sum_probs=89.1
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC--CCCeEEeeecCCCCCCCccceeEEEecCC-CCCCCceEEEEEEEc
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD--PNKKCSTKVDDEGDTCPYWDETLAIPLPG-PVDDDTTLIIDVVHA 80 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld--~~~~~~T~v~~~~~~nP~WnE~f~f~v~~-~~l~~~~L~v~V~d~ 80 (277)
...|+|+|++|++|...+.. +.+||||++++. ...+.+|++ ++++.||+|||+|.|.+.. ..+....|.|+|||+
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFS-GTSDPFVKIYLLPDKKHKLETKV-KRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSS-SCCCEEEEEEEESCCSSEEECCC-CTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCCCCC-CCCCcEEEEEEECCCCccEeCce-EcCCCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 35799999999999988754 899999999993 356789999 7889999999999999532 223457899999999
Q ss_pred cCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecC
Q 023810 81 GNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRP 119 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~ 119 (277)
+. ..+++|||++.|+|.++.... ....||.|...
T Consensus 103 d~-~~~~~~iG~~~i~l~~l~~~~----~~~~W~~L~~~ 136 (141)
T 2d8k_A 103 DR-FSRNDPIGEVSIPLNKVDLTQ----MQTFWKDLKPS 136 (141)
T ss_dssp CS-SSSCEEEEEEEEETTTSCTTS----CEEEEECCEEC
T ss_pred CC-CCCCcEEEEEEEEhhhhcCCC----CccEEEECcCC
Confidence 96 468899999999999987642 35678988654
No 17
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.75 E-value=6.8e-18 Score=133.95 Aligned_cols=106 Identities=20% Similarity=0.238 Sum_probs=86.7
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEE--C--CCCeEEeeecCCCCCCCccceeEEEe-cCCCCCCCceEEEEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWV--D--PNKKCSTKVDDEGDTCPYWDETLAIP-LPGPVDDDTTLIIDVVH 79 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~l--d--~~~~~~T~v~~~~~~nP~WnE~f~f~-v~~~~l~~~~L~v~V~d 79 (277)
..|+|+|++|++|.. +. ++.+||||++++ + ...+.+|++ ++++.||+|||+|.|. +....+....|.|+|||
T Consensus 20 ~~L~V~V~~a~~L~~-~~-~g~~DPyv~v~l~~~~~~~~~~kT~v-~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 20 GTLFIMVMHIKDLVT-ED-GADPNPYVKTYLLPDTHKTSKRKTKI-SRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp TEEEEEEEEEECCCC-TT-SCCCCEEEEEEEESCSSSCCCEECCC-CCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred CEEEEEEEEeeCCCC-CC-CCCCCeEEEEEEEcCCCCCceecCCc-CcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 589999999999986 43 388999999999 2 245689999 7789999999999999 76433445789999999
Q ss_pred ccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeec
Q 023810 80 AGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKR 118 (277)
Q Consensus 80 ~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~ 118 (277)
++. .++++|||++.|+|.++... .....||.|..
T Consensus 97 ~d~-~~~~~~lG~~~i~l~~l~~~----~~~~~W~~L~~ 130 (134)
T 2b3r_A 97 AES-LRENFFLGGITLPLKDFNLS----KETVKWYQLTA 130 (134)
T ss_dssp CCS-SSCCEEEEEEEEEGGGSCTT----SCEEEEEECBC
T ss_pred CCC-CCCCcEEEEEEEEhhhccCC----CCcceeEECCC
Confidence 996 46789999999999998653 23568898854
No 18
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=5.8e-18 Score=134.70 Aligned_cols=112 Identities=22% Similarity=0.281 Sum_probs=89.3
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC----CCCeEEeeecCCCCCCCccceeEEEec-CCCCCCCceEEEEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD----PNKKCSTKVDDEGDTCPYWDETLAIPL-PGPVDDDTTLIIDVVH 79 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld----~~~~~~T~v~~~~~~nP~WnE~f~f~v-~~~~l~~~~L~v~V~d 79 (277)
..|+|+|++|++|...+.. +.+||||++++. ...+.+|++ ++++.||+|||+|.|.+ ....+....|.|+|||
T Consensus 21 ~~L~v~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~~~kT~~-~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 21 HQLIVTILGAKDLPSREDG-RPRNPYVKIYFLPDRSDKNKRRTKT-VKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TEEEEEEEEEESCCCCSSS-CCCCEEEECCCSSCCSSSSCCBCCC-CSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CEEEEEEEEccCCCCcCCC-CCCCCEEEEEEecCCCCCcceeCcc-ccCCCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 5799999999999988854 889999999993 245789999 77899999999999994 4333445789999999
Q ss_pred ccCCCCC--CceeEEEEEecceeccccCCCceeeEEEEeecC-CCCCc
Q 023810 80 AGNEEDT--KKLIGSAKLKLKDVINDVGLGERASLTLKLKRP-SGRPH 124 (277)
Q Consensus 80 ~~~~~~~--d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~-sg~~~ 124 (277)
++.+ .. ++|||++.|+|.++... . ...||.|... +++..
T Consensus 99 ~d~~-~~~~~~~lG~~~i~l~~l~~~---~--~~~W~~L~~~~~g~~s 140 (141)
T 1v27_A 99 QARV-REEESEFLGEILIELETALLD---D--EPHWYKLQTHDSGPSS 140 (141)
T ss_dssp BCSS-SSCCBCCCEEEEEEGGGCCCS---S--EEEEEECBCCSSCCCC
T ss_pred CCCC-cCCCCceEEEEEEEccccCCC---C--CCceEECcccccCCCC
Confidence 9864 44 89999999999998653 1 5689998653 34433
No 19
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.75 E-value=3.9e-18 Score=138.25 Aligned_cols=118 Identities=18% Similarity=0.213 Sum_probs=91.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP----NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVH 79 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~----~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d 79 (277)
...|+|+|++|++|...+ . +.+||||++++.+ ..+.+|++ ++++.||+|||+|.|.+....+. ..|.|+|||
T Consensus 26 ~~~L~V~v~~a~~L~~~d-~-g~~Dpyv~v~l~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~~~-~~L~i~V~d 101 (153)
T 3fbk_A 26 DRVLLLHIIEGKGLISKQ-P-GTCDPYVKISLIPEDSRLRHQKTQT-VPDCRDPAFHEHFFFPVQEEDDQ-KRLLVTVWN 101 (153)
T ss_dssp SSEEEEEEEEEESCCCCS-S-SCCCEEEEEEEESCSCCTTCEECCC-CTTCSSCEEEEEEEEECCGGGTT-SEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCC-C-CCCCEEEEEEEEcCCCCccEEeccc-cCCCCCCccccEEEEecccHHhC-CEEEEEEEe
Confidence 358999999999999887 4 8999999999932 35689999 78899999999999999654443 459999999
Q ss_pred ccCCCCC-CceeEEEEEecceeccccCCCceeeEEEEeecCCCCCceEEEE
Q 023810 80 AGNEEDT-KKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPHGKVDV 129 (277)
Q Consensus 80 ~~~~~~~-d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~~G~L~l 129 (277)
.+.+ .+ ++|||++.|+|.+|... +.....||.|........+.|.+
T Consensus 102 ~d~~-~~~d~~lG~~~i~l~~l~~~---~~~~~~W~~L~~~~~g~~~~lkv 148 (153)
T 3fbk_A 102 RASQ-SRQSGLIGCMSFGVKSLLTP---DKEISGWYYLLGEHLGRTKHLKV 148 (153)
T ss_dssp CCSS-GGGCEEEEEEEEEHHHHTC-----CCEEEEEECBCTTGGGTCCCBC
T ss_pred CCCC-CCCCcEEEEEEEEHHHhcCC---CCccccEEECCChhhccccccee
Confidence 9864 44 89999999999998752 23356899997654433344433
No 20
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.74 E-value=1.3e-18 Score=141.74 Aligned_cols=108 Identities=18% Similarity=0.234 Sum_probs=87.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC---C--CeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP---N--KKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVV 78 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~---~--~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~ 78 (277)
...|+|+|++|++|...+.. +.+||||++++.+ . .+++|++ +++++||+|||+|.|.|....+....|.|+||
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~-g~sDPyVkv~l~~~~~~~~~~~kT~v-~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~ 119 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQ-QDQKVNIRVAVLPCSESTTCLFRTRP-LDASDTLVFNEVFWVSMSYPALHQKTLRVDVC 119 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCS-CCSEEEEEEEEESCSCHHHHEEECCC-EECCSSEEEEEEEEEECCHHHHHHCEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccC-CCCCEEEEEEEecCCCCCccceeCCc-CCCCCCCccccEEEEEcCHHHhCcCEEEEEEE
Confidence 35899999999999988754 8999999999943 2 3689999 78899999999999998753344568999999
Q ss_pred EccCCCCCCceeEEEEEecceeccccCCCceeeEEEEee
Q 023810 79 HAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLK 117 (277)
Q Consensus 79 d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~ 117 (277)
|++. .++++|||++.|+|.++... +.....||.|.
T Consensus 120 d~d~-~~~~d~iG~~~i~l~~l~~~---~~~~~~W~~L~ 154 (155)
T 2z0u_A 120 TTDR-SHLEECLGGAQISLAEVCRS---GERSTRWYNLL 154 (155)
T ss_dssp EECT-TSCEEEEEEEEEECTTSCTT---CCCEEEEEEEB
T ss_pred ECCC-CCCCcEEEEEEEEHHHccCC---CCccccceEcc
Confidence 9997 47899999999999998532 23356788874
No 21
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.74 E-value=2.4e-17 Score=135.88 Aligned_cols=119 Identities=15% Similarity=0.169 Sum_probs=91.0
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccCCC
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGNEE 84 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~~~ 84 (277)
..|.|+|++|++|.. ++++||||+++. .+.+|++..+++.||+|||+|.|.+.. ....|.|+|||++ +
T Consensus 14 ~~L~V~V~~A~~l~~----~g~~DPYV~v~~---~~~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~d-~- 81 (167)
T 2cjs_A 14 SLLCVGVKKAKFDGA----QEKFNTYVTLKV---QNVESTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNKG-L- 81 (167)
T ss_dssp CEEEEEEEEEECSSC----GGGCEEEEEEEE---TTEEEECCCEESSSCEEEEEEEEECCC---TTSEEEEEEEECC-S-
T ss_pred EEEEEEEEEEECCCC----CCCCCeEEEEEe---cceEEEEecCCCCCCCCCCEEEEEeeC---CCCEEEEEEEECC-C-
Confidence 589999999998842 378999999993 234566634468999999999999975 2457999999998 4
Q ss_pred CCCceeEEEEEecceeccccCCC--ceeeEEEEeecCCCCCceE-------EEEEEEEEe
Q 023810 85 DTKKLIGSAKLKLKDVINDVGLG--ERASLTLKLKRPSGRPHGK-------VDVKVAVRE 135 (277)
Q Consensus 85 ~~d~~iG~~~v~L~~l~~~~~~~--~~~~~~~~L~~~sg~~~G~-------L~l~v~~~~ 135 (277)
..|+|||++.|+|.++......+ .|..+++.+..++++.+|+ |.++++|..
T Consensus 82 ~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~ 141 (167)
T 2cjs_A 82 IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFEL 141 (167)
T ss_dssp SCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEC
T ss_pred CCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeec
Confidence 68999999999999987654323 4667788876666665554 667777744
No 22
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.74 E-value=7.6e-18 Score=135.62 Aligned_cols=109 Identities=21% Similarity=0.330 Sum_probs=89.1
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP----NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~----~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
..|+|+|++|++|...+..++.+||||++++.+ ..+.+|++ ++++.||+|||+|.|.|....+....|.|+|||.
T Consensus 23 ~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~ 101 (148)
T 3fdw_A 23 QSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSI-KRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHH 101 (148)
T ss_dssp TEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCC-CSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEE
T ss_pred CEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCcccccc-CCCCCCCcEeeEEEEEeChhHhCceEEEEEEEEC
Confidence 579999999999997763348899999999943 23789999 7889999999999999977555556799999999
Q ss_pred cCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecC
Q 023810 81 GNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRP 119 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~ 119 (277)
+. .++++|||++.|+|.++.... ....||.|..+
T Consensus 102 d~-~~~~~~iG~~~i~l~~l~~~~----~~~~W~~L~~~ 135 (148)
T 3fdw_A 102 GR-FGRNTFLGEAEIQMDSWKLDK----KLDHCLPLHGK 135 (148)
T ss_dssp CG-GGCEEEEEEEEEEHHHHHHHC----CSEEEEECBCC
T ss_pred CC-CcCCcEEEEEEEEcccccccC----CccceEECcCc
Confidence 86 468899999999999986542 24578998654
No 23
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=4.2e-18 Score=136.01 Aligned_cols=112 Identities=20% Similarity=0.266 Sum_probs=87.3
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC--CC--CeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD--PN--KKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVH 79 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld--~~--~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d 79 (277)
...|+|+|++|++|...+.. + +||||++++. .. .+.+|++ ++++.||+|||+|.|.|....+....|.|+|||
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~-g-~dpyv~v~l~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 99 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSED-G-SDPYVRMYLLPDKRRSGRRKTHV-SKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKN 99 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTT-C-CCEEEEEEEESCCCSSSCEECCC-CCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEE
T ss_pred CCEEEEEEEEeECCCCCCCC-C-CCeeEEEEEEcCCCCCCcccCCc-cCCCCCCCcCceEEEEecHHHhCcCEEEEEEEE
Confidence 35799999999999988865 7 9999999993 22 5789999 778999999999999986433334589999999
Q ss_pred ccCCCC-CCceeEEEEEecceeccccCCCceeeEEEEeecCCCC
Q 023810 80 AGNEED-TKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGR 122 (277)
Q Consensus 80 ~~~~~~-~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~ 122 (277)
++.+.. .++|||++.|+|.++.... ....|+.|...+..
T Consensus 100 ~d~~~~~~~~~iG~~~i~l~~~~~~~----~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 100 SGGFLSKDKGLLGKVLVALASEELAK----GWTQWYDLTEDSGP 139 (142)
T ss_dssp CCCSSCCSCCCCEEEEEECCCSTTTT----CBCCBCCCBCSCSC
T ss_pred CCCccccCCcEEEEEEEecccccccc----cccceeeccCCCCC
Confidence 986433 3579999999999886542 23567878655443
No 24
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.9e-17 Score=133.42 Aligned_cols=105 Identities=22% Similarity=0.283 Sum_probs=87.3
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP----NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~----~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
..|+|+|++|++|...+.. +.+||||++++.. ..+.+|++ ++++.||+|||+|.|.+....+ ...|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~~-~~~L~i~V~d~ 107 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDPN-GLSDPYVKLKLIPDPKSESKQKTKT-IKCSLNPEWNETFRFQLKESDK-DRRLSVEIWDW 107 (149)
T ss_dssp SEEEEEEEEEESCCCCSTT-SCCCEEEEEEEESCTTCSSCEECCC-CSSCSSCEEEEEEEEECCSGGG-GCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCCC-CCcCeEEEEEEECCCCCcceEecce-eCCCCCCcCCcEEEEEeccccC-CCEEEEEEEEC
Confidence 4799999999999988754 8999999999943 45789999 7789999999999999975322 35799999999
Q ss_pred cCCCCCCceeEEEEEecceeccccCCCceeeEEEEeec
Q 023810 81 GNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKR 118 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~ 118 (277)
+. ..+++|||++.|+|.+|.... ...||.|..
T Consensus 108 d~-~~~~~~iG~~~i~l~~l~~~~-----~~~W~~L~~ 139 (149)
T 1a25_A 108 DL-TSRNDFMGSLSFGISELQKAG-----VDGWFKLLS 139 (149)
T ss_dssp CS-SSCCEEEEEEEEEHHHHTTCC-----EEEEEECBC
T ss_pred CC-CCCCCEEEEEEEEHHHhCcCc-----cCCeEEccC
Confidence 96 468899999999999987541 467898854
No 25
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.73 E-value=7.6e-18 Score=134.51 Aligned_cols=108 Identities=28% Similarity=0.413 Sum_probs=86.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCccceeEEEe-cCCCCCCCceEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP----NKKCSTKVDDEGDTCPYWDETLAIP-LPGPVDDDTTLIIDVV 78 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~----~~~~~T~v~~~~~~nP~WnE~f~f~-v~~~~l~~~~L~v~V~ 78 (277)
...|+|+|++|++|...+.. +.+||||++++.+ ..+.+|++ ++++.||+|||+|.|. +....+....|.|+||
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSN-GLADPYVKLHLLPGASKSNKLRTKT-LRNTRNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTT-SCCCEEEEEEEESCCSGGGEEECCC-CCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCEEEEEEEEecCCCCCCCC-CCCCCEEEEEEEcCCCCcceeeCCc-CCCCCCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 35899999999999988754 8999999999943 36789999 7789999999999998 6432222368999999
Q ss_pred EccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeec
Q 023810 79 HAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKR 118 (277)
Q Consensus 79 d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~ 118 (277)
|++. .++++|||++.|+|.++.... ....|+.|.+
T Consensus 106 d~d~-~~~d~~iG~~~i~l~~l~~~~----~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDK-FGHNEFIGETRFSLKKLKANQ----RKNFNICLER 140 (142)
T ss_dssp EECT-TSCEEEEEEEEEEGGGCCTTC----CEEEEEECBC
T ss_pred ECCC-CCCCcEEEEEEEEHHHcCCCC----ccEEEEeccc
Confidence 9986 467899999999999987542 3456676654
No 26
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=1.5e-17 Score=130.36 Aligned_cols=105 Identities=22% Similarity=0.260 Sum_probs=82.2
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC----CCCeEEeeecCCCCCCCccceeEEEec-CCCCCCCceEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD----PNKKCSTKVDDEGDTCPYWDETLAIPL-PGPVDDDTTLIIDVV 78 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld----~~~~~~T~v~~~~~~nP~WnE~f~f~v-~~~~l~~~~L~v~V~ 78 (277)
...|+|+|++|++|...+.. +.+||||++++. ...+.+|++ ++++.||+|||+|.|.+ ....+....|.|+||
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~-~~~dpyv~v~~~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~ 94 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDG-RPRNPYVKIYFLPDRSDKNKRRTKT-VKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 94 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTS-CCBCEEEEEEEESSCSGGGEEECCC-CSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCC-CCCCCEEEEEEecCCCCCcceeccc-ccCCCCCccccEEEEccCCHHHhcCCeEEEEEE
Confidence 35799999999999988754 889999999992 246789999 77899999999999995 322334578999999
Q ss_pred EccCCCCC--CceeEEEEEecceeccccCCCceeeEEEEe
Q 023810 79 HAGNEEDT--KKLIGSAKLKLKDVINDVGLGERASLTLKL 116 (277)
Q Consensus 79 d~~~~~~~--d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L 116 (277)
|++.. ++ +++||++.|+|.++.... ...||.|
T Consensus 95 d~d~~-~~~~~~~lG~~~i~l~~l~~~~-----~~~W~~L 128 (129)
T 2bwq_A 95 DQARV-REEESEFLGEILIELETALLDD-----EPHWYKL 128 (129)
T ss_dssp EC--------CEEEEEEEEEGGGCCCSS-----CEEEEEC
T ss_pred ECCcC-cCcCCceeEEEEEEccccCCCc-----CCccEEC
Confidence 99864 44 899999999999987542 4567776
No 27
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=8.4e-17 Score=142.63 Aligned_cols=125 Identities=20% Similarity=0.277 Sum_probs=101.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC--CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEcc
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP--NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAG 81 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~--~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~ 81 (277)
...|+|+|++|++|...+.. +.+||||++++.+ ..+.+|++ +.++.||+|||+|.|.+...++....|.|+|||.+
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~-~~~dpyv~v~~~~~~~~~~~T~~-~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMG-GTSDPYVKVFLLPDKKKKFETKV-HRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSS-SSCCEEEEEEEETCTTSCEECCC-CCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCCCCC-CCCCeEEEEEEEcCCCceEeCCc-ccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 35899999999999988754 8999999999943 45789999 77899999999999998764455678999999999
Q ss_pred CCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCC---CCCceEEEEEEEEEe
Q 023810 82 NEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPS---GRPHGKVDVKVAVRE 135 (277)
Q Consensus 82 ~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~s---g~~~G~L~l~v~~~~ 135 (277)
. .++++|||++.|+|.++... .....|+.|.... ....|+|.+++++..
T Consensus 96 ~-~~~~~~lG~~~i~l~~l~~~----~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 96 R-FSKHDIIGEFKVPMNTVDFG----HVTEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp S-SSCCCEEEEEEEEGGGCCCS----SCEEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred C-CCCCceeEEEEEcchhcccC----CcceeEEEeeccccccccccccEEEEEEecC
Confidence 6 46889999999999998654 2356788886542 346799999888764
No 28
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=3.2e-17 Score=130.63 Aligned_cols=106 Identities=21% Similarity=0.183 Sum_probs=85.2
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC---CCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD---PNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld---~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
...|+|+|++|++ .+. ++.+||||++++. ...+.+|++ +++++||+|||+|.|.+....+....|.|+|||+
T Consensus 25 ~~~L~V~v~~a~~---~d~-~g~sDPyv~v~l~~~~~~~~~kT~v-~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~ 99 (138)
T 1wfm_A 25 KAELFVTRLEAVT---SNH-DGGCDCYVQGSVANRTGSVEAQTAL-KKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTC 99 (138)
T ss_dssp TTEEEEEEEEEEC---CCC-SSCCCEEEEEEEEETTEEEEEECCC-CCCCSSEECSSCEEEECCTTSSTTCEEEEEEEEC
T ss_pred CCEEEEEEEEEEc---CCC-CCCcceEEEEEEEcCCCcccEeccc-CcCCCCCcCCceEEEEecHHHcCCCEEEEEEEEC
Confidence 3589999999994 343 3889999999993 234578999 7889999999999999977556667899999999
Q ss_pred cCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecC
Q 023810 81 GNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRP 119 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~ 119 (277)
+. ..+++|||++.|+|.++... .....|+.|...
T Consensus 100 d~-~~~dd~lG~~~i~l~~l~~~----~~~~~W~~L~~~ 133 (138)
T 1wfm_A 100 DR-FSRHSVAGELRLGLDGTSVP----LGAAQWGELKTS 133 (138)
T ss_dssp CS-SCTTSCSEEEEEESSSSSSC----TTCCEEEECCCC
T ss_pred CC-CCCCcEEEEEEEEcccccCc----ccccceeeCcCC
Confidence 96 47899999999999998543 224678888653
No 29
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=134.49 Aligned_cols=109 Identities=19% Similarity=0.224 Sum_probs=85.1
Q ss_pred ceEEEEEEEEeeCCCCC-CC-----CCCCCCcEEEEEECC--CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEE
Q 023810 4 RYEVEVTITSAKDLKNV-NW-----RHGPNRPYAVLWVDP--NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLII 75 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~-~~-----~~g~~dpYv~v~ld~--~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v 75 (277)
...|+|+|++|++|... +. ..+.+||||++++.+ ..+.+|++ ++++.||+|||+|.|.|....+....|.|
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGV-KRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCC-CCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeec-ccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 35899999999999874 21 125899999999943 46789999 78899999999999998653333458999
Q ss_pred EEEEccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeec
Q 023810 76 DVVHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKR 118 (277)
Q Consensus 76 ~V~d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~ 118 (277)
+|||++. ..+++|||++.|+|.++.... ....|+.|..
T Consensus 104 ~V~d~d~-~~~~~~iG~~~i~l~~l~~~~----~~~~w~~L~~ 141 (147)
T 2enp_A 104 TVVDFDK-FSRHCVIGKVSVPLCEVDLVK----GGHWWKALIP 141 (147)
T ss_dssp EEECCST-TCCSCCCEEEEEETTTSCTTT----CCCEEECCBC
T ss_pred EEEECCC-CcCCcEEEEEEEechhcCCCC----CccEEEEeec
Confidence 9999986 467889999999999986542 2356777753
No 30
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.72 E-value=4e-17 Score=132.02 Aligned_cols=92 Identities=16% Similarity=0.268 Sum_probs=74.7
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEE--CCCC--eEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWV--DPNK--KCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~l--d~~~--~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
..|+|+|++|++|...+.. +.+||||++++ +... +++|++ ++++.||+|||+|.|.|....+....|.|+|||+
T Consensus 30 ~~L~v~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 30 NTLTVVVLKARHLPKSDVS-GLSDPYVKVNLYHAKKRISKKKTHV-KKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TEEEEEEEEEESCC-------CCCEEEEEEEEETTEEEEEEECCC-CCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CEEEEEEEEeECCCCcCCC-CCCCeEEEEEEEeCCeEeceEecCc-ccCCCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 5899999999999988754 88999999999 3222 569999 7789999999999999987555567899999999
Q ss_pred cCCCCCCceeEEEEEecce
Q 023810 81 GNEEDTKKLIGSAKLKLKD 99 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~ 99 (277)
+. ..+++|||++.|+|.+
T Consensus 108 d~-~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 108 ER-GSRNEVIGRLVLGATA 125 (153)
T ss_dssp CT-TSCCEEEEEEEESTTC
T ss_pred CC-CCCCcEEEEEEECCCC
Confidence 86 4688999999999987
No 31
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=4.1e-18 Score=135.98 Aligned_cols=108 Identities=18% Similarity=0.209 Sum_probs=87.0
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCC-------------CeEEeeecCCCCCCCccceeEEEe-cCCCCCCC
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPN-------------KKCSTKVDDEGDTCPYWDETLAIP-LPGPVDDD 70 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~-------------~~~~T~v~~~~~~nP~WnE~f~f~-v~~~~l~~ 70 (277)
..|+|+|++|++|...+.. +.+||||++++... .+.+|++ ++++.||+|||+|.|. +....+..
T Consensus 18 ~~L~V~v~~a~~L~~~d~~-g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~~v~~~~l~~ 95 (142)
T 1rh8_A 18 GNLIIHILQARNLVPRDNN-GYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKY-VQKSLNPEWNQTVIYKSISMEQLMK 95 (142)
T ss_dssp TEEEEEEEEEESCCCCSSS-SCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTT-THHHHSCEEEEEEEECSCCHHHHTT
T ss_pred CEEEEEEEEecCCCCCCCC-CCCCceEEEEEecCCCcccccccccccceeeccc-cCCCCCCCCCCEEEECCcCHHHccC
Confidence 4799999999999988854 89999999999542 2468888 6789999999999997 65323345
Q ss_pred ceEEEEEEEccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecC
Q 023810 71 TTLIIDVVHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRP 119 (277)
Q Consensus 71 ~~L~v~V~d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~ 119 (277)
..|.|+|||++. .++++|||++.|+|.++.... ....||.|...
T Consensus 96 ~~l~i~V~d~d~-~~~~~~lG~~~i~l~~l~~~~----~~~~W~~L~~~ 139 (142)
T 1rh8_A 96 KTLEVTVWDYDR-FSSNDFLGEVLIDLSSTSHLD----NTPRWYPLKEQ 139 (142)
T ss_dssp CEEEEEEEEECS-SSCEEEEEEEEEETTSCGGGT----TCCEEEECBCC
T ss_pred CEEEEEEEECCC-CCCCceEEEEEEeccccccCC----CCCeEEECCcc
Confidence 789999999996 468899999999999986542 24578988654
No 32
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=3.5e-17 Score=129.50 Aligned_cols=105 Identities=23% Similarity=0.309 Sum_probs=87.5
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC----CCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD----PNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld----~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
..|+|+|++|++|...+.. +.+||||++++. ...+.+|++ +.++.||+|||+|.|.+..... ...|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~d~~-~~~dpyv~v~~~~~~~~~~~~kT~~-~~~t~nP~wne~f~f~~~~~~~-~~~l~i~v~d~ 92 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPN-GLSDPYVKLKLIPDPKNESKQKTKT-IRSTLNPQWNESFTFKLKPSDK-DRRLSVEIWDW 92 (137)
T ss_dssp TEEEEEEEEEESCCCCSTT-SCCCEEEEEEEECCTTCCCCEECCC-CCSCSSCEEEEEEEEECCGGGG-GCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCCC-CCCCeeEEEEEEcCCCCCeeecCce-EcCCCCCCcccEEEEEcCchhc-CCEEEEEEEEC
Confidence 5799999999999988754 899999999993 245789999 7889999999999999875322 35799999999
Q ss_pred cCCCCCCceeEEEEEecceeccccCCCceeeEEEEeec
Q 023810 81 GNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKR 118 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~ 118 (277)
+. .++++|||++.|+|.+|.... ...||.|..
T Consensus 93 d~-~~~~~~iG~~~i~l~~l~~~~-----~~~W~~L~~ 124 (137)
T 3rdl_A 93 DR-TTRNDFMGSLSFGVSELMKMP-----ASGWYKLLN 124 (137)
T ss_dssp CS-SSCCEEEEEEEEEHHHHHHSC-----EEEEEECBC
T ss_pred CC-CCCCceEEEEEEeHHHhccCc-----cCceEECcC
Confidence 86 468999999999999997642 467888854
No 33
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.72 E-value=3.9e-17 Score=132.95 Aligned_cols=109 Identities=19% Similarity=0.309 Sum_probs=87.1
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCC----CeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPN----KKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~----~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
..|+|+|++|++|...+.. +.+||||++++... .+.+|++ ++++.||+|||+|.|.|....+....|.|+|||.
T Consensus 25 ~~L~V~v~~a~~L~~~d~~-g~~dpyv~v~l~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 25 GKLTVVILEAKNLKKMDVG-GLSDPYVKIHLMQNGKRLKKKKTTI-KKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 102 (159)
T ss_dssp TEEEEEEEEEESCCCCSTT-SCCCEEEEEEEEETTEEEEEEECCC-CCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCccCC-CCCCeEEEEEEEeCCceeceeeCce-ecCCCCCcccceEEEEcCHHHhCCcEEEEEEEEC
Confidence 5899999999999988854 89999999999432 3578998 7789999999999999975444456799999999
Q ss_pred cCCCCCCceeEEEEEeccee----------ccccCCCceeeEEEEeec
Q 023810 81 GNEEDTKKLIGSAKLKLKDV----------INDVGLGERASLTLKLKR 118 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l----------~~~~~~~~~~~~~~~L~~ 118 (277)
+. .++++|||++.|+|..+ .... +.....|+.|..
T Consensus 103 d~-~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~--~~~~~~W~~L~~ 147 (159)
T 1tjx_A 103 DK-IGKNDAIGKVFVGYNSTGAELRHWSDMLANP--RRPIAQWHTLQV 147 (159)
T ss_dssp CS-SSCCEEEEEEEEETTCCHHHHHHHHHHHHST--TCCEEEEEECBC
T ss_pred CC-CCCCceEEEEEECCCCCCcHHHHHHHHHHCC--CCeeeeEEECcC
Confidence 96 46899999999999853 2221 234568888854
No 34
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.72 E-value=2.9e-17 Score=130.09 Aligned_cols=95 Identities=25% Similarity=0.410 Sum_probs=79.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCC----CeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPN----KKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVH 79 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~----~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d 79 (277)
...|+|+|++|++|...+.. +.+||||++++... .+.+|++ +.++.||+|||+|.|.+....+....|.|+|||
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~-g~~dpyv~v~~~~~~~~~~~~kT~~-~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIG-GTSDPYVKVWLMYKDKRVEKKKTVT-KKRNLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTT-TBCCEEEEEEEEETTEEEEEEECCC-CSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCeEEEEEEEeeCCCCcCCC-CCcCeEEEEEEEeCCCccceEeCcc-ccCCCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 35899999999999988754 89999999999432 4678888 788999999999999987644445689999999
Q ss_pred ccCCCCCCceeEEEEEecceec
Q 023810 80 AGNEEDTKKLIGSAKLKLKDVI 101 (277)
Q Consensus 80 ~~~~~~~d~~iG~~~v~L~~l~ 101 (277)
.+. .++++|||++.|+|.++.
T Consensus 93 ~~~-~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 93 KDK-LSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp CCS-SSCCEEEEEEEESSSSCH
T ss_pred CCC-CCCCcEEEEEEEccccCC
Confidence 996 468899999999998643
No 35
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.72 E-value=6.2e-17 Score=132.80 Aligned_cols=95 Identities=19% Similarity=0.279 Sum_probs=80.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP----NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVH 79 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~----~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d 79 (277)
...|+|+|++|++|...+.. +.+||||++++.. ..+.+|++ ++++.||+|||+|.|.+....+....|.|+|||
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~-g~~DPyv~v~l~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 113 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDAN-GYSDPFVKLWLKPDMGKKAKHKTQI-KKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWD 113 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTT-SCCCEEEEEEEETC---CCEEECCC-CCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCEEEEEEEEeECCCCccCC-CCCCcEEEEEEECCCCccceEeCCc-ccCCCCCcccceEEEEcchHhcCCCEEEEEEEE
Confidence 35899999999999988754 8999999999953 36789999 788999999999999997544445689999999
Q ss_pred ccCCCCCCceeEEEEEecceec
Q 023810 80 AGNEEDTKKLIGSAKLKLKDVI 101 (277)
Q Consensus 80 ~~~~~~~d~~iG~~~v~L~~l~ 101 (277)
++. .++++|||++.|+|.++.
T Consensus 114 ~d~-~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 114 YDI-GKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp CCS-SSCCEEEEEEEEETTCCH
T ss_pred CCC-CCCCcEEEeEEEecccCC
Confidence 996 468899999999998753
No 36
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.71 E-value=5.3e-17 Score=134.09 Aligned_cols=107 Identities=21% Similarity=0.260 Sum_probs=86.5
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCC----CeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEE-E
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPN----KKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVV-H 79 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~----~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~-d 79 (277)
..|+|+|++|++|...+..++.+||||++++... .+.+|++ ++++.||+|||+|.|.+.. ....|.|+|| |
T Consensus 30 ~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~---~~~~L~~~V~~d 105 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRI-ARKTLDPLYQQSLVFDESP---QGKVLQVIVWGD 105 (171)
T ss_dssp TEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCC-CCSCSSCEEEEEEECSSCC---TTEEEEEEEEEE
T ss_pred CEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCcc-CCCCCCCCCCcEEEEEecC---CCCEEEEEEEEc
Confidence 4799999999999987742389999999999432 3678999 7889999999999999864 4678999999 8
Q ss_pred ccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCC
Q 023810 80 AGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPS 120 (277)
Q Consensus 80 ~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~s 120 (277)
++. .++++|||++.|+|.++... .....||.|...+
T Consensus 106 ~d~-~~~d~~iG~~~i~l~~l~~~----~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 106 YGR-MDHKCFMGVAQILLEELDLS----SMVIGWYKLFPPS 141 (171)
T ss_dssp CST-TCSSEEEEEEEECGGGSCTT----SCEEEEEECBCGG
T ss_pred CCC-CCCCCEEEEEEEEHHHcccC----CCcceeEECCCcc
Confidence 886 46889999999999998643 2356899996543
No 37
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.68 E-value=2.8e-16 Score=140.52 Aligned_cols=126 Identities=21% Similarity=0.274 Sum_probs=97.2
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCCCcEEEEEE--CCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEcc
Q 023810 4 RYEVEVTITSAKDLKNVNWRHGPNRPYAVLWV--DPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAG 81 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~l--d~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~ 81 (277)
...|+|+|++|++|...+.. +.+||||++++ +...+.+|++ ++++.||+|||+|.|.+...++....|.|+|||.+
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~-g~~dPyv~v~l~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSN-GFSDPYVKIYLLPDRKKKFQTKV-HRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTT-SCCCEEEEEECTTSTTSCEECCC-CCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCEEEEEEEEeECCCCcCCC-CCcCeEEEEEEEcCCCeeEeCCc-cCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 35899999999999988754 89999999999 4467789999 78899999999999998754445568999999999
Q ss_pred CCCCCCceeEEEEEe-cceeccccCCCceeeEEEEeecC--CCCCceEEEEEEEEEe
Q 023810 82 NEEDTKKLIGSAKLK-LKDVINDVGLGERASLTLKLKRP--SGRPHGKVDVKVAVRE 135 (277)
Q Consensus 82 ~~~~~d~~iG~~~v~-L~~l~~~~~~~~~~~~~~~L~~~--sg~~~G~L~l~v~~~~ 135 (277)
. .++++|||++.|+ |.++.... .....|+.|... .....|+|.+++++..
T Consensus 97 ~-~~~~~~iG~~~i~~l~~~~~~~---~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 97 R-FSRHDLIGQVVLDNLLELAEQP---PDRPLWRDILEGGSEKADLGELNFSLCYLP 149 (296)
T ss_dssp S-SSCCCEEEEEECCCTTGGGSSC---SSCCCCEECBCCSSCCSCCCEEEEEEEEET
T ss_pred C-CCCCceEEEEEeccccccccCC---ccceeeeccccccccccccceEEEEEEecc
Confidence 6 4789999999996 44444321 123456666443 3345799988888754
No 38
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.68 E-value=5.4e-16 Score=123.11 Aligned_cols=119 Identities=18% Similarity=0.307 Sum_probs=98.4
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCC-CCCCCccceeEEEecCCCCCCCceEEEEEEEccCC
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDE-GDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGNE 83 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~-~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~~ 83 (277)
=.|+|+|.+|++|+ ++.|||+++.+ +..+++|++ ++ ++.||+|||.|+|++......++.|.|.|++++++
T Consensus 21 msL~V~l~~a~~Lp------g~~Dp~akv~F-Rg~k~kTkv-i~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 21 MALIVHLKTVSELR------GRADRIAKVTF-RGQSFYSRV-LENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEEESCC------SCEEEEEEEEE-TTEEEECCC-EEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEEecCCC------CCCCCeEEEEE-eccceeeEE-eccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 36899999999997 57799999999 588899999 65 79999999999999987545578899999999985
Q ss_pred CCCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCC-ceEEEEEEEEEec
Q 023810 84 EDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRP-HGKVDVKVAVRES 136 (277)
Q Consensus 84 ~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~-~G~L~l~v~~~~~ 136 (277)
.+++|||++.|+|+++.... ...++-.|.+.+.++ .++|.++|+|..+
T Consensus 93 -~~nrlIG~~~i~Lq~lv~~~----~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 93 -FSNKLIGTFRMVLQKVVEEN----RVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp -SCCEEEEEEEEESHHHHHHS----EEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred -cCCCEEEEEEEEhHHhccCC----eEEEeecccCCCCCccccEEEEEEEecCC
Confidence 68999999999999998764 234566677766554 5888888888654
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.65 E-value=8.2e-16 Score=146.96 Aligned_cols=121 Identities=15% Similarity=0.252 Sum_probs=98.3
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccCCC
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGNEE 84 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~~~ 84 (277)
.+|+|+|++|++|+..+.. +.+||||+++++ ..+.+|++ +.++.||+|||+|.|.+.. .....|.|+|||++. .
T Consensus 387 ~~l~v~v~~a~~L~~~d~~-~~sdpyv~v~~~-~~~~~T~~-~~~t~nP~w~e~f~f~~~~--~~~~~l~~~v~d~d~-~ 460 (510)
T 3jzy_A 387 GRLMVHVIEATELKACKPN-GKSNPYCEISMG-SQSYTTRT-IQDTLNPKWNFNCQFFIKD--LYQDVLCLTLFDRDQ-F 460 (510)
T ss_dssp EEEEEEEEEEESCCCCSTT-SCCCEEEEEEET-TEEEECCC-CSSCSSCEEEEEEEEEESC--TTTCEEEEEEEECCS-S
T ss_pred ceEEEEeceeecCCCCCCC-CCCCeEEEEEEC-CeeccCCc-cCCCCCCccCceEEEEecC--CCCCEEEEEEEeCCC-C
Confidence 5799999999999988754 899999999994 67889999 7889999999999999965 345679999999997 4
Q ss_pred CCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCCceEEEEEEEEE
Q 023810 85 DTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPHGKVDVKVAVR 134 (277)
Q Consensus 85 ~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~~G~L~l~v~~~ 134 (277)
+.++|||++.|+|.++............|+.|. ++..|+|.|++.+.
T Consensus 461 ~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~---~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH---EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB---SSSSCEEEEEEEEE
T ss_pred CCCCceEEEEEEHHHhccccCCCCceeeeecCC---CCCCceEEEEEEEE
Confidence 789999999999999876532112245677764 34679998888764
No 40
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.59 E-value=1.5e-14 Score=141.71 Aligned_cols=121 Identities=17% Similarity=0.241 Sum_probs=97.4
Q ss_pred ceEEEEEEEEeeCCCCCCC-CCCCCCcEEEEEECC----CCeEEeeecCCCC-CCCccceeEEEecCCCCCCCceEEEEE
Q 023810 4 RYEVEVTITSAKDLKNVNW-RHGPNRPYAVLWVDP----NKKCSTKVDDEGD-TCPYWDETLAIPLPGPVDDDTTLIIDV 77 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~~~~-~~g~~dpYv~v~ld~----~~~~~T~v~~~~~-~nP~WnE~f~f~v~~~~l~~~~L~v~V 77 (277)
...|+|+|++|++|...+. .++..||||++++.+ ..+.+|++ ++++ .||+|||+|.|.|.... ...|+|+|
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkv-i~~ng~NP~WnE~f~F~v~~~e--l~~L~~~V 572 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAV-ITNNGFNPRWDMEFEFEVTVPD--LALVRFMV 572 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCC-CTTCSSSCEEEEEEEEEESCGG--GCEEEEEE
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeeccc-ccCCCCCCccCceEEEEEecCC--CCEEEEEE
Confidence 3589999999999987763 237899999999943 25679999 5554 99999999999997532 35799999
Q ss_pred EEccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCC--ceEEEEEEEEEe
Q 023810 78 VHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRP--HGKVDVKVAVRE 135 (277)
Q Consensus 78 ~d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~--~G~L~l~v~~~~ 135 (277)
||++. .++++|||++.|+|..|..+ .++++|++..+.. .++|.|+++|.+
T Consensus 573 ~D~D~-~~~dd~iG~~~ipl~~L~~G-------~r~v~L~d~~g~~~~~~~L~v~i~~~~ 624 (624)
T 1djx_A 573 EDYDS-SSKNDFIGQSTIPWNSLKQG-------YRHVHLLSKNGDQHPSATLFVKISIQD 624 (624)
T ss_dssp EECCS-SSCCEEEEEEEEEGGGBCCE-------EEEEEEECTTSCEEEEEEEEEEEEEEC
T ss_pred EEcCC-CCCCceeEEEEEEHHHcCCC-------cEEEeCCCCCcCCCCceEEEEEEEEEC
Confidence 99986 47899999999999998653 2578888877764 588889888853
No 41
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.58 E-value=1.7e-14 Score=138.86 Aligned_cols=112 Identities=18% Similarity=0.224 Sum_probs=89.7
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccCCC
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGNEE 84 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~~~ 84 (277)
..|+|+|++|++|+. +++ +++||||++++. ..+.+|++ +++++||+|||+|.|.+... .....|.|+|||++. .
T Consensus 394 ~~L~V~V~~A~~L~~-D~~-g~sDPYV~v~l~-~~~~kTkv-ik~tlNP~Wne~f~f~~~~~-~~~~~L~~~V~D~D~-~ 467 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYT-TATDAYLKVFFG-GQEFRTGV-VWNNNNPRWTDKMDFENVLL-STGGPLRVQVWDADY-G 467 (540)
T ss_dssp EEEEEEEEEEESCCC-SSC-SCCCEEEEEEET-TEEEECCC-BCSCSSCBCCCCEEEEEEET-TTCCCEEEEEEECCS-S
T ss_pred cEEEEEEEEccCCCc-ccC-CCcCeEEEEEEC-CEeeeeee-ecCCCCCCCCeEEEEEEecC-CCCCEEEEEEEECCC-C
Confidence 479999999999998 765 899999999995 56799999 88899999999999985321 135689999999996 4
Q ss_pred CCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCCceEEEEEEEEEec
Q 023810 85 DTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRPHGKVDVKVAVRES 136 (277)
Q Consensus 85 ~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~~G~L~l~v~~~~~ 136 (277)
.+++|||++.++|.. +. ...|+.| .+|+|.+++++.=.
T Consensus 468 ~~dD~LG~~~~~L~~-------g~-~~~~~~l------~~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 468 WDDDLLGSCDRSPHS-------GF-HEVTCEL------NHGRVKFSYHAKCL 505 (540)
T ss_dssp SCCEEEEEEEECCCS-------EE-EEEEEEC------SSSEEEEEEEEEEC
T ss_pred CCCCEEEEEEEEeeC-------Cc-EEEEEEc------CCeEEEEEEEEEEC
Confidence 688999999999873 22 3456665 25899988887543
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=2.9e-14 Score=126.18 Aligned_cols=111 Identities=18% Similarity=0.275 Sum_probs=87.0
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC--CC--CeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD--PN--KKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld--~~--~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
..|+|+|++|++|...+.. +.+||||++++. +. .+.+|++ ++++.||+|||+|.|.+....+....|.|+|||+
T Consensus 150 ~~l~v~v~~a~~L~~~d~~-~~~dpyv~v~~~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 150 GKLTVVILEAKNLKKMDVG-GLSDPYVKIHLMQNGKRLKKKKTTI-KKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TEEEEEEEEEESCCCCSTT-SCCCEEEEEEEEETTEEEEEEECCC-CCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred CceEEEEEEeECCCCcCCC-CCcCeEEEEEEEeCCcEeeeeccce-ecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 4799999999999988754 889999999983 22 3568888 7889999999999999976545456799999999
Q ss_pred cCCCCCCceeEEEEEecceecccc--------CCCceeeEEEEeec
Q 023810 81 GNEEDTKKLIGSAKLKLKDVINDV--------GLGERASLTLKLKR 118 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~~~~--------~~~~~~~~~~~L~~ 118 (277)
+. .++++|||++.|+|..+.... ..+.....|+.|..
T Consensus 228 d~-~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 228 DK-IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp CS-SSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred CC-CCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 96 478999999999997642210 11234568888854
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.46 E-value=1.6e-13 Score=136.11 Aligned_cols=104 Identities=17% Similarity=0.321 Sum_probs=86.3
Q ss_pred ceEEEEEEEEeeCCCC---CCCCCCCCCcEEEEEECC--CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEE
Q 023810 4 RYEVEVTITSAKDLKN---VNWRHGPNRPYAVLWVDP--NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVV 78 (277)
Q Consensus 4 ~~~L~V~v~~A~~L~~---~~~~~g~~dpYv~v~ld~--~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~ 78 (277)
...|+|+|++|++|.. .+.. +++||||++++.+ ..+.+|++ ++++.||+|||+|.|.|... ....|.|+||
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~-g~sDPYV~V~l~~~~~~k~kTkv-ik~tlNPvWNEtF~F~v~~~--~~~~L~~~V~ 92 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDML-DTPDPYVELFISTTPDSRKRTRH-FNNDINPVWNETFEFILDPN--QENVLEITLM 92 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHH-CCCCEEEEEECTTSTTCCEECCC-CTTCSSCEEEEEEEEEECTT--SCCBCEEEEE
T ss_pred ccEEEEEEEEEECCCCccccCCC-CCcCeEEEEEEecCCCCeEecce-EcCCCCCeeeeEEEEEecCC--CCCEEEEEEE
Confidence 3589999999999987 6644 8899999999953 46789999 77899999999999999752 3568999999
Q ss_pred EccCCCCCCceeEEEEEecceeccccCCCceeeEEEEee
Q 023810 79 HAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLK 117 (277)
Q Consensus 79 d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~ 117 (277)
|++.+ + ++|||++.|+|.+|... .....|+.|.
T Consensus 93 D~D~~-~-ddfIG~v~I~L~~L~~g----~~~~~w~~L~ 125 (749)
T 1cjy_A 93 DANYV-M-DETLGTATFTVSSMKVG----EKKEVPFIFN 125 (749)
T ss_dssp ECCSS-S-CEEEEEECCBSTTSCTT----CCCCEEEEET
T ss_pred ECCCC-C-CceeEEEEEEHHHcCCC----CceEEEEecC
Confidence 99974 5 99999999999998653 2345788884
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.46 E-value=6.2e-15 Score=140.54 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=18.1
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCC---CCCccceeEEEecCCCCCCCceEEEEEEEc-
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNKKCSTKVDDEGD---TCPYWDETLAIPLPGPVDDDTTLIIDVVHA- 80 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~~~~T~v~~~~~---~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~- 80 (277)
..|+|+|++|++|...+ ||||+++++...+.||++ ++++ .||+|||+|.|.+... ...|.|+|||+
T Consensus 11 ~~L~V~VieAk~L~~~d------dpYv~v~l~~~~~~kT~v-~~kt~~glnP~WnE~F~f~~~~~---~~~L~v~V~d~~ 80 (483)
T 3bxj_A 11 NVLKLWIIEARELPPKK------RYYCELCLDDMLYARTTS-KPRSASGDTVFWGEHFEFNNLPA---VRALRLHLYRDS 80 (483)
T ss_dssp ECC----------------------------------------------------CCEECC-------------------
T ss_pred cEEEEEEEEcCCcCCCC------CCeEEEEECCeEEeeeeE-EeCCCCCCCCccccEEEEecCCC---ccEEEEEEEecC
Confidence 46899999999998643 899999997555678998 6667 9999999999997542 36799999994
Q ss_pred cC--CCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCC------------------------CCceEEEEEEEEE
Q 023810 81 GN--EEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSG------------------------RPHGKVDVKVAVR 134 (277)
Q Consensus 81 ~~--~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg------------------------~~~G~L~l~v~~~ 134 (277)
+. ...+++|||++.|+|.++.... ....||+|..+.. +..|+|+|+++|.
T Consensus 81 d~~~~~~~d~~lG~v~i~l~~l~~~~----~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~ 156 (483)
T 3bxj_A 81 DKKRKKDKAGYVGLVTVPVATLAGRH----FTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQ 156 (483)
T ss_dssp ------------------------------CCEECC--------------------------------------CEEEEE
T ss_pred CccccCCCCceEEEEEEEHHHhcCCC----CCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEee
Confidence 31 1357899999999999987542 2456777743211 2469999999998
Q ss_pred ec
Q 023810 135 ES 136 (277)
Q Consensus 135 ~~ 136 (277)
+.
T Consensus 157 ~~ 158 (483)
T 3bxj_A 157 TM 158 (483)
T ss_dssp EC
T ss_pred ee
Confidence 75
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.44 E-value=5.5e-14 Score=125.60 Aligned_cols=94 Identities=22% Similarity=0.260 Sum_probs=79.8
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC--C--CCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD--P--NKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld--~--~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
..|+|+|++|++|...+.. +.+||||++++. + ..+.+|++ ++++.||+|||+|.|.|....+....|.|+|||+
T Consensus 152 ~~l~v~v~~a~~L~~~d~~-g~~Dpyv~v~l~~~~~~~~~~kT~v-~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 152 GLLTVTIIKASNLKAMDLT-GFSDPYVKASLISEGRRLKKRKTSI-KKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TEEEEEEEEEESCCCCSSS-SCCCEEEEECCCTTCCTTSCEECCC-CCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ceeEEEEEEeecCCccCCC-CCCCcEEEEEEEeCCcCccceecce-ecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 5799999999999988865 889999999994 2 25679998 7889999999999999976445456799999999
Q ss_pred cCCCCCCceeEEEEEecceec
Q 023810 81 GNEEDTKKLIGSAKLKLKDVI 101 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~ 101 (277)
+. .++++|||++.|+|.++.
T Consensus 230 d~-~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 230 DC-IGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp CS-SSCCEEEEECCCSSCTTC
T ss_pred CC-CCCCceEEEEEECCccCC
Confidence 96 478999999999998754
No 46
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.36 E-value=6.3e-12 Score=126.61 Aligned_cols=113 Identities=18% Similarity=0.263 Sum_probs=89.4
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC-----CCeEEeeecCCCCCCCccce-eEEEe-cCCCCCCCceEEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP-----NKKCSTKVDDEGDTCPYWDE-TLAIP-LPGPVDDDTTLIIDV 77 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~-----~~~~~T~v~~~~~~nP~WnE-~f~f~-v~~~~l~~~~L~v~V 77 (277)
.+|+|+|++|++|.. .+.||||+|.+.+ ..+++|++..+++.||+||| +|.|. |... +...|+|+|
T Consensus 725 ~~L~V~Visaq~L~~-----~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~p--ela~Lrf~V 797 (885)
T 3ohm_B 725 NALRVKVISGQFLSD-----RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLP--TLASLRIAA 797 (885)
T ss_dssp EEEEEEEEEEESCCS-----SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCG--GGCEEEEEE
T ss_pred eEEEEEEEEeccCcc-----cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcC--CcCEEEEEE
Confidence 479999999999974 3579999999932 13578998445679999999 69998 6542 235799999
Q ss_pred EEccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCC--ceEEEEEEEEEec
Q 023810 78 VHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRP--HGKVDVKVAVRES 136 (277)
Q Consensus 78 ~d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~--~G~L~l~v~~~~~ 136 (277)
||++ ++|||++.|+|..|..+ .+.++|++..+.. .++|.|.|.+.+.
T Consensus 798 ~D~d-----ddfiG~~~lpL~~L~~G-------yR~vpL~~~~g~~l~~atLfv~i~~~~~ 846 (885)
T 3ohm_B 798 FEEG-----GKFVGHRILPVSAIRSG-------YHYVCLRNEANQPLCLPALLIYTEASDY 846 (885)
T ss_dssp EETT-----TEEEEEEEEETTTCCCE-------EEEEEEECTTSCEEEEEEEEEEEEEEEC
T ss_pred EcCC-----ccEEeeEEEEHHHcCCC-------ceEEEecCCCCCccCceEEEEEEEEEec
Confidence 9976 58999999999998654 3467888877764 7999999999874
No 47
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.32 E-value=2.3e-11 Score=122.06 Aligned_cols=111 Identities=17% Similarity=0.263 Sum_probs=86.3
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC-----CCeEEee-ecCCCCCCCccce-eEEE-ecCCCCCCCceEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP-----NKKCSTK-VDDEGDTCPYWDE-TLAI-PLPGPVDDDTTLIID 76 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~-----~~~~~T~-v~~~~~~nP~WnE-~f~f-~v~~~~l~~~~L~v~ 76 (277)
..|+|+|++|++|.. .+.||||+|.+.+ ..+.+|+ +..+++.||+||| +|.| .|...+ -..|+|+
T Consensus 678 ~~L~V~Visa~~L~~-----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e--l~~Lr~~ 750 (799)
T 2zkm_X 678 TTLSITVISGQFLSE-----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPE--LASLRVA 750 (799)
T ss_dssp EEEEEEEEEEESCCS-----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGG--GCEEEEE
T ss_pred eeEEEEEEeccccCc-----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCC--ccEEEEE
Confidence 479999999999974 3679999999932 2367999 7445679999999 6999 785432 2479999
Q ss_pred EEEccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCCC--CceEEEEEEEEE
Q 023810 77 VVHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGR--PHGKVDVKVAVR 134 (277)
Q Consensus 77 V~d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~--~~G~L~l~v~~~ 134 (277)
|||++ ++|||++.|+|+.|..+ .++++|.+..+. ..++|.|++.+.
T Consensus 751 V~D~d-----~d~iG~~~ipl~~L~~G-------~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 751 VMEEG-----NKFLGHRIIPINALNSG-------YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEETT-----TEEEEEEEEEGGGBCCE-------EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEEeC-----CCccceEeeehhhcCCC-------cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 99985 58999999999998653 356778776665 357888888775
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.31 E-value=2e-11 Score=122.18 Aligned_cols=113 Identities=23% Similarity=0.291 Sum_probs=89.3
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEECC----C--CeEEeeecCCCCCCCcccee-EEEe-cCCCCCCCceEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVDP----N--KKCSTKVDDEGDTCPYWDET-LAIP-LPGPVDDDTTLIID 76 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~----~--~~~~T~v~~~~~~nP~WnE~-f~f~-v~~~~l~~~~L~v~ 76 (277)
.+|+|+|++|++|.. .+.||||+|.+.+ . .+++|++..+++.||+|||+ |.|. |...+ -..|+|+
T Consensus 650 ~~L~V~Visaq~L~~-----~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pe--la~Lrf~ 722 (816)
T 3qr0_A 650 GTIEIKIISAQFLSD-----KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPD--LAVVRII 722 (816)
T ss_dssp EEEEEEEEEEECCCS-----SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGG--GCEEEEE
T ss_pred eEEEEEEEEcccCCC-----CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCC--ccEEEEE
Confidence 579999999999974 3679999999932 1 46789985556799999998 9998 75422 3579999
Q ss_pred EEEccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCCCC--ceEEEEEEEEEec
Q 023810 77 VVHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSGRP--HGKVDVKVAVRES 136 (277)
Q Consensus 77 V~d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg~~--~G~L~l~v~~~~~ 136 (277)
|||++ ++|||++.|+|+.|..+ .+.++|++..+.. .++|.|.|++.+.
T Consensus 723 V~D~d-----ddfiG~~~ipL~~L~~G-------yR~vpL~~~~g~~~~~atLfv~i~~~~~ 772 (816)
T 3qr0_A 723 VSEEN-----GKFIGHRVMPLDGIKPG-------YRHVPLRNESNRPLGLASVFAHIVAKDY 772 (816)
T ss_dssp EEETT-----SCEEEEEEEESTTCCCE-------EEEEEEECTTSCEEEEEEEEEEEEEEEC
T ss_pred EEecC-----CCeeeEEEEEHHHcCCc-------ceEEEEeCCCCCCCCceEEEEEEEEEec
Confidence 99974 58999999999998754 3467888877765 3788888888774
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.27 E-value=1.4e-11 Score=121.81 Aligned_cols=106 Identities=21% Similarity=0.265 Sum_probs=87.2
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC----CCCeEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEc
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD----PNKKCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHA 80 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld----~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~ 80 (277)
..|+|+|++|++|...+.. +.+||||++++. ...+.+|++ +++++||+|||+|.|.+.... ....|.|+|||+
T Consensus 172 ~~L~V~v~~a~~L~~~d~~-g~sDPyvkv~l~p~~~~~~k~kT~v-~~~tlnP~wne~f~f~~~~~~-~~~~L~v~v~d~ 248 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMDPN-GLSDPYVKLKLIPDPKSESKQKTKT-IKSSLNPEWNETFRFQLKESD-KDRRLSVEIWDW 248 (674)
T ss_dssp SEEEEEEEEEESCCCCSTT-SSCCEEEEEEEESCSSCCSCEECCC-CSSCSSCEEEEEEEEECCSTT-TTCEEEEEEEEC
T ss_pred ceeeeeeecccccCCCCcc-cccCcccccccccCccccccccccc-cccccCCCccceeeeecccCC-ccceeeeEEeec
Confidence 4789999999999988865 899999999992 235689999 788999999999999987643 345699999999
Q ss_pred cCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecC
Q 023810 81 GNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRP 119 (277)
Q Consensus 81 ~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~ 119 (277)
+. .++++|||++.|+|+++.... ...|+.|...
T Consensus 249 d~-~~~dd~iG~~~i~l~~l~~~~-----~~~w~~Lls~ 281 (674)
T 3pfq_A 249 DL-TSRNDFMGSLSFGISELQKAG-----VDGWFKLLSQ 281 (674)
T ss_dssp CS-SSCCEECCBCCCBTTHHHHCC-----EEEEEECBCT
T ss_pred cc-ccccccccccccchhhhccCC-----cccceeeccc
Confidence 96 578999999999999987653 2567777543
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.22 E-value=3.3e-10 Score=87.41 Aligned_cols=114 Identities=15% Similarity=0.207 Sum_probs=83.0
Q ss_pred EEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCC---eEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccC
Q 023810 6 EVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNK---KCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGN 82 (277)
Q Consensus 6 ~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~---~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~ 82 (277)
.|+|.+.++..-.... .....||||.+.++-.. +.+|-+..+.+..|+|||+|.-.|.+ .+.|.|.|++...
T Consensus 7 flRi~~~~~~~~~~~~-~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~----Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 7 FLRIAFNSYELGSLQA-EDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE----GRVIQIVLMRAAE 81 (126)
T ss_dssp EEEEEEEEEECSSCCC-SSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT----TCEEEEEEEEETT
T ss_pred cEEeeeccccccccCC-ccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC----CEEEEEEEEcCCC
Confidence 6788876665322111 11368999999995322 22553436789999999999999975 6789999998773
Q ss_pred CCCCCceeEEEEEecceeccccCC-CceeeEEEEeecCCCCCceEEEEEEEEE
Q 023810 83 EEDTKKLIGSAKLKLKDVINDVGL-GERASLTLKLKRPSGRPHGKVDVKVAVR 134 (277)
Q Consensus 83 ~~~~d~~iG~~~v~L~~l~~~~~~-~~~~~~~~~L~~~sg~~~G~L~l~v~~~ 134 (277)
+||..|+|.+++|+.+... +.....|+.| +++|+|.+.+.+.
T Consensus 82 -----~fvAn~tV~~edL~~~c~~~~g~~e~WvdL-----eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 -----EPVSEVTVGVSVLAERCKKNNGKAEFWLDL-----QPQAKVLMSVQYF 124 (126)
T ss_dssp -----EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC-----BSSCEEEEEEEEE
T ss_pred -----CeeeEEEEEHHHHHhhhccCCCceEEEEec-----ccCcEEEEEEEEe
Confidence 8999999999999966211 2345789998 3478999988875
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.13 E-value=4.4e-10 Score=87.88 Aligned_cols=116 Identities=14% Similarity=0.207 Sum_probs=82.9
Q ss_pred EEEEEEEEeeCCCCCCCCCCCCCcEEEEEECCCC---eEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccC
Q 023810 6 EVEVTITSAKDLKNVNWRHGPNRPYAVLWVDPNK---KCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGN 82 (277)
Q Consensus 6 ~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld~~~---~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~ 82 (277)
.|+|.+.+..............||||.+.++-.. +.+|-+.++.+..|+|||+|.-.|.+ .+.|.|.|+|...
T Consensus 11 flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~----Gr~l~i~Vfh~a~ 86 (138)
T 2enj_A 11 FLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK----GRVMQIIVKGKNV 86 (138)
T ss_dssp CEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS----SCEEEEEEECSSC
T ss_pred ceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC----CeEEEEEEEcCCC
Confidence 5788887766543221111368999999995322 24552225568899999999999975 6789999997763
Q ss_pred CCCCCceeEEEEEecceeccccCC-CceeeEEEEeecCCCCCceEEEEEEEEEe
Q 023810 83 EEDTKKLIGSAKLKLKDVINDVGL-GERASLTLKLKRPSGRPHGKVDVKVAVRE 135 (277)
Q Consensus 83 ~~~~d~~iG~~~v~L~~l~~~~~~-~~~~~~~~~L~~~sg~~~G~L~l~v~~~~ 135 (277)
+||..|+|.+.+|+.+... +.....|+.| +++|+|.+.+.+.-
T Consensus 87 -----~fVAn~tV~~edL~~~ck~~~g~~e~WvdL-----eP~Gkl~v~i~~~~ 130 (138)
T 2enj_A 87 -----DLISETTVELYSLAERCRKNNGKTEIWLEL-----KPQGRMLMNARYFL 130 (138)
T ss_dssp -----SCCEEEEEESHHHHHHHHHTTTCEEEEEEC-----BSSCEEEEEEEECC
T ss_pred -----CeeeEEEEEHHHHHhhhccCCCceEEEEec-----ccCcEEEEEEEEEE
Confidence 7999999999999965211 2345789998 34788999888854
No 52
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A
Probab=98.44 E-value=6.3e-09 Score=86.24 Aligned_cols=31 Identities=32% Similarity=0.451 Sum_probs=11.3
Q ss_pred cccCCCchhHHHHHHHHHHHhHhhhhhhhhh
Q 023810 223 KSKFGGMGTGLAVGAVGGILGGLALAEGVDA 253 (277)
Q Consensus 223 ~~~~~g~g~g~~~g~~~g~~gg~~~~~~~~~ 253 (277)
++.+++|++++|+||++|+|+|++|+++++.
T Consensus 95 ~kg~~g~a~aAa~Gag~G~LGGalLG~a~~~ 125 (219)
T 1dx0_A 95 KTNMKHVAGAAAAGAVVGGLGGYMLGSAMSR 125 (219)
T ss_dssp ------------------CCCSCEECCCCCC
T ss_pred CCCcchHHHHHHHHHHhhhhhhhhhhccccc
Confidence 3445577778999999999999999987765
No 53
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=97.18 E-value=0.0017 Score=51.96 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=84.6
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEEC--CCCeEEeeecCCCCCCCccceeEEEecCCC-----CCCCceEEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWVD--PNKKCSTKVDDEGDTCPYWDETLAIPLPGP-----VDDDTTLIIDV 77 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~ld--~~~~~~T~v~~~~~~nP~WnE~f~f~v~~~-----~l~~~~L~v~V 77 (277)
..++|.|.++.--...-...+..+|...+.++ .-+.+.|.+ .. +.+|.+|.+..|.|..+ -++...|.|++
T Consensus 18 nlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv-~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lEL 95 (156)
T 2yrb_A 18 NLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPV-VR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEV 95 (156)
T ss_dssp EEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCC-EE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEE
T ss_pred cEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccc-cc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEE
Confidence 46788888775321110001344665555542 356778887 43 88999999988888654 13345789999
Q ss_pred EEccCCCCCCceeEEEEEecceeccccCCCceeeEEEEeecCCC--CCceEEEEEEEEEec
Q 023810 78 VHAGNEEDTKKLIGSAKLKLKDVINDVGLGERASLTLKLKRPSG--RPHGKVDVKVAVRES 136 (277)
Q Consensus 78 ~d~~~~~~~d~~iG~~~v~L~~l~~~~~~~~~~~~~~~L~~~sg--~~~G~L~l~v~~~~~ 136 (277)
..... ..-+.||.++|+|.+|+... ++......|....+ ..-|.|.+.|+++-+
T Consensus 96 hqa~g--~~~~tla~~~I~l~~lLe~~---~~i~g~~~L~g~~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 96 HQAYS--TEYETIAACQLKFHEILEKS---GRIFCTASLIGTKGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEECS--SCEEEEEEEEECCSHHHHCC---SCEEEEEEECBSSSCCTTSEEEEEEEEEEEC
T ss_pred EEeeC--CCceEEEEEEEEhHHhhCcC---CceEEEEEEEcCCCCcceEEEEEEEEEEecc
Confidence 88653 35578999999999999763 23445567766666 568999999999765
No 54
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.74 E-value=0.033 Score=46.98 Aligned_cols=58 Identities=19% Similarity=0.279 Sum_probs=44.5
Q ss_pred eEEeeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccCCC---CCCceeEEEEEecc
Q 023810 40 KCSTKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGNEE---DTKKLIGSAKLKLK 98 (277)
Q Consensus 40 ~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~~~---~~d~~iG~~~v~L~ 98 (277)
..+|.| ...+.+|.|+|+|++.|+........|.|++++..... ..+..+|.+.+||-
T Consensus 78 e~~S~V-~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVI-YYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCC-CTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eEEEEE-EEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 457777 67789999999999999886666788999999865321 12357899999874
No 55
>3heq_A Major prion protein; cell membrane, disease mutation, disulfide bond, glycoprotein, golgi apparatus, GPI-anchor, lipoprotein, membrane, polymorphism; 1.80A {Homo sapiens} PDB: 2lsb_A 2k1d_A 2lej_A 2lv1_A 2lft_A 1fkc_A 1fo7_A 3haf_A 3hj5_A 1qm0_A 1qm1_A 2kun_A 3hes_A 3her_A 1b10_A 2joh_A 2fj3_A 2jom_A 2l1h_A 2l39_A ...
Probab=95.97 E-value=0.00037 Score=53.04 Aligned_cols=46 Identities=28% Similarity=0.381 Sum_probs=16.2
Q ss_pred ccccccCCCchhHHHHHHHHHHHhHhhhhhhhhhhhhhhhHHHHhh
Q 023810 220 EKKKSKFGGMGTGLAVGAVGGILGGLALAEGVDALEDHIADEAAEK 265 (277)
Q Consensus 220 ~~~~~~~~g~g~g~~~g~~~g~~gg~~~~~~~~~~~~~~~~~~~~~ 265 (277)
.+.+..||.++.++++|+++|.|+|.+|+.++....-++..+.||.
T Consensus 14 ~k~Ktn~k~vAgaAaAGAVvGGlgGy~lG~amsrp~~~F~~~~Ed~ 59 (142)
T 3heq_A 14 SKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDR 59 (142)
T ss_dssp -----------------------CCCEECCCCCCCCCCCSSHHHHH
T ss_pred CCCcccHHHHHHHHHhhhhhhccchHHHHhhccCCccCCCChHHHH
Confidence 3456778888889999999999999999998865555555555554
No 56
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=93.19 E-value=0.51 Score=48.01 Aligned_cols=91 Identities=12% Similarity=0.066 Sum_probs=56.8
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEE--CCC---CeEEeeecCCCCCCCccceeEEEecCCCCCC-CceEEEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWV--DPN---KKCSTKVDDEGDTCPYWDETLAIPLPGPVDD-DTTLIIDVV 78 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~l--d~~---~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~-~~~L~v~V~ 78 (277)
..+.|+|.++.++... ...+.||.+.+ +.. ....|+. +.-..++.|||.+.|++.-.++. ...|.|+||
T Consensus 217 ~~f~i~i~~~~~~~~~----~~~~~~V~~~l~~g~~~l~~~~~T~~-~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD----ERMKLVVQAGLFHGNEMLCKTVSSSE-VNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp SEEEEEEEEEECCCC-------CEEEEEEEEEETTEESSCCEECCC-EESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CceEEEEEEecccCCC----CCceEEEEEEEEECCEEccCceeccc-ccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 4689999999887532 34567888777 321 1233433 33367899999999987554333 567999999
Q ss_pred EccCC--C---------CCCceeEEEEEeccee
Q 023810 79 HAGNE--E---------DTKKLIGSAKLKLKDV 100 (277)
Q Consensus 79 d~~~~--~---------~~d~~iG~~~v~L~~l 100 (277)
+.... . .....||.+.++|-+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECC
Confidence 85321 0 0234788888877653
No 57
>2lbg_A Major prion protein; conserved hydrophobic region, membrane protei; NMR {Homo sapiens}
Probab=93.17 E-value=0.094 Score=28.51 Aligned_cols=21 Identities=43% Similarity=0.585 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhHhhhhhhhh
Q 023810 232 GLAVGAVGGILGGLALAEGVD 252 (277)
Q Consensus 232 g~~~g~~~g~~gg~~~~~~~~ 252 (277)
.+++|++.|.|||.+++.+|+
T Consensus 6 a~AAGaVvGglGgy~lg~~ms 26 (27)
T 2lbg_A 6 AAAAGAVVGGLGGYMLGSAMS 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHHHhc
Confidence 678888888899999988775
No 58
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A
Probab=93.10 E-value=0.006 Score=50.62 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=14.3
Q ss_pred cccccCCCchhHHHHHHHHHHHhHhhhhhhhhh-hhh---hhhHHHHhhhh
Q 023810 221 KKKSKFGGMGTGLAVGAVGGILGGLALAEGVDA-LED---HIADEAAEKVE 267 (277)
Q Consensus 221 ~~~~~~~g~g~g~~~g~~~g~~gg~~~~~~~~~-~~~---~~~~~~~~~~~ 267 (277)
+.++.+|+|+ ++++++++|+++|++.+.++.+ +++ ++.+..+|.+.
T Consensus 90 kp~k~~kg~~-g~a~aAa~Gag~G~LGGalLG~a~~~p~~~f~~~yee~YY 139 (219)
T 1dx0_A 90 KPSKPKTNMK-HVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGSDYEDRYY 139 (219)
T ss_dssp ------------------------CCCSCEECCCCCCCCCCCSSHHHHHHH
T ss_pred CCCCCCCCcc-hHHHHHHHHHHhhhhhhhhhhccccccccccCchhhhhhh
Confidence 3456666766 7888888888888888877754 666 55545555543
No 59
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=92.36 E-value=0.66 Score=47.77 Aligned_cols=94 Identities=15% Similarity=0.175 Sum_probs=60.3
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEE--CCCC---eEEeeecCCCCCCCccceeEEEecCCCCC-CCceEEEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWV--DPNK---KCSTKVDDEGDTCPYWDETLAIPLPGPVD-DDTTLIIDVV 78 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~l--d~~~---~~~T~v~~~~~~nP~WnE~f~f~v~~~~l-~~~~L~v~V~ 78 (277)
..++|+|+++..+.. ++. ...+.||.+.+ +.+. ..+|+. ....++.|||.++|++.-..+ ....|.|+||
T Consensus 355 ~~f~v~i~~~~~~n~-~~~-~~~~~~V~~~l~hG~~~L~~~~~T~~--~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~ 430 (1091)
T 3hhm_A 355 SALRIKILCATYVNV-NIR-DIDKIYVRTGIYHGGEPLCDNVNTQR--VPCSNPRWNEWLNYDIYIPDLPRAARLCLSIC 430 (1091)
T ss_dssp SEEEEEEEEESCCCC-CCS-SCCCCCEEEEEESSSCSSCCEECCCC--CCTTSCEEEEEEEEEEEGGGCCTTCEEEEEEC
T ss_pred CCEEEEEEEecCCCC-Ccc-ccceEEEEEEEEECCEEccCceeccc--cCCCCCCCCeeEEecCccccCChhcEEEEEEE
Confidence 368999999988753 222 35678888887 3222 233432 335678899999998755433 3567999999
Q ss_pred EccCCCC---CCceeEEEEEecceecc
Q 023810 79 HAGNEED---TKKLIGSAKLKLKDVIN 102 (277)
Q Consensus 79 d~~~~~~---~d~~iG~~~v~L~~l~~ 102 (277)
+.....+ ....||.+.++|-+...
T Consensus 431 ~~~~~~~~~~~~~~lg~~n~~lfd~~~ 457 (1091)
T 3hhm_A 431 SVKGRKGAKEEHCPLAWGNINLFDYTD 457 (1091)
T ss_dssp CCCCCC-------CCEEEEEESBCTTC
T ss_pred EecCccCcccccceeEEeeeeeEccCC
Confidence 8543111 23479999998877543
No 60
>1tpx_A Prion protein, major prion protein; antibody, unknown function; 2.56A {Ovis aries} SCOP: d.6.1.1
Probab=90.79 E-value=0.013 Score=44.28 Aligned_cols=35 Identities=29% Similarity=0.399 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhHHHHhhh
Q 023810 232 GLAVGAVGGILGGLALAEGVDALEDHIADEAAEKV 266 (277)
Q Consensus 232 g~~~g~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~ 266 (277)
++++|+++|.|+|.+|+.+|....-++..+.|+.+
T Consensus 5 aaaaGAvvGgl~Gy~lg~a~~r~~~~F~~~~EdrY 39 (121)
T 1tpx_A 5 AAAAGAVVGGLGGYMLGSAMSRPLIHFGNDYEDRY 39 (121)
T ss_dssp ---------CCTTCEECCCCCCCCCCCSSHHHHHH
T ss_pred hHHHhHHhhcchhHHHHhcccCCCCCCCCcHHHHH
Confidence 68889999999999999998766666666666553
No 61
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=87.23 E-value=0.63 Score=48.04 Aligned_cols=72 Identities=13% Similarity=0.074 Sum_probs=46.6
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEE--CCC---CeEEeeecCCCCCCCccceeEEEecCCCCCC-CceEEEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWV--DPN---KKCSTKVDDEGDTCPYWDETLAIPLPGPVDD-DTTLIIDVV 78 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~l--d~~---~~~~T~v~~~~~~nP~WnE~f~f~v~~~~l~-~~~L~v~V~ 78 (277)
..+.|+|.++.++... ...+.||.+.+ +.+ ....|+. +....++.|||.+.|++.-.++. ...|.|+||
T Consensus 353 ~~f~i~i~~~~~~~~~----~~~~~~V~~~l~~g~~~L~~~~~T~~-~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE----ETVKVHVRAGLFHGTELLCKTVVSSE-ISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp SEEEEEECCCCCCCCC----SSCCCCCBCCEEETTEESSCCCBCCC-CCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred CCEEEEEEEeccCCCC----CCceEEEEEEEEECCEEccCceeccc-ccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 4688999998887532 24466776555 321 1223433 34467899999999987654343 567999999
Q ss_pred Ecc
Q 023810 79 HAG 81 (277)
Q Consensus 79 d~~ 81 (277)
+..
T Consensus 428 ~~~ 430 (1092)
T 2y3a_A 428 AVL 430 (1092)
T ss_dssp CC-
T ss_pred Eec
Confidence 853
No 62
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=86.79 E-value=1.3 Score=45.17 Aligned_cols=94 Identities=11% Similarity=-0.011 Sum_probs=54.0
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCCcEEEEEE-CCCCe---EEeeecCCCCCCCccceeEEEecCCCCC-CCceEEEEEEE
Q 023810 5 YEVEVTITSAKDLKNVNWRHGPNRPYAVLWV-DPNKK---CSTKVDDEGDTCPYWDETLAIPLPGPVD-DDTTLIIDVVH 79 (277)
Q Consensus 5 ~~L~V~v~~A~~L~~~~~~~g~~dpYv~v~l-d~~~~---~~T~v~~~~~~nP~WnE~f~f~v~~~~l-~~~~L~v~V~d 79 (277)
..++|+|+.+....... +...+.||.+.| .+.+. .+|+. +.-+.++.|||.+.|++.-.++ ....|.|+||+
T Consensus 218 ~~f~i~i~~~~~~~~~~--~~~~~~~V~~~l~~G~~~l~~~~t~~-~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 294 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR--TADLTVFVEANIQYGQQVLCQRRTSP-KPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYC 294 (961)
T ss_dssp SEEEEEEEEEECSSCCT--TSCEEEEEEEEEEETTEEEEEEECCC-EECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CceEEEEeecccccccC--CCCceEEEEEEEEECCEEcccceeec-cccCCCcccceeEEeccccccCCcccEEEEEEEe
Confidence 35778888775422111 134567887766 22222 23322 2335679999999998655433 35679999997
Q ss_pred ccCCC---------------CCCceeEEEEEecceec
Q 023810 80 AGNEE---------------DTKKLIGSAKLKLKDVI 101 (277)
Q Consensus 80 ~~~~~---------------~~d~~iG~~~v~L~~l~ 101 (277)
..... .....||.+.++|-+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 295 GAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EEC--------------------CEEEEEEEESBCTT
T ss_pred cccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 43210 12336888888776643
No 63
>1xu0_A Prion protein, XLPRP; amphibian, polymorphism, glycoprotein, membrane protein; NMR {Xenopus laevis} SCOP: d.6.1.1
Probab=86.28 E-value=0.035 Score=42.39 Aligned_cols=35 Identities=23% Similarity=0.497 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhHHHHhhh
Q 023810 232 GLAVGAVGGILGGLALAEGVDALEDHIADEAAEKV 266 (277)
Q Consensus 232 g~~~g~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~ 266 (277)
.+++|++||+++|.+|+.+|....-++....++++
T Consensus 19 ~va~aA~Ag~~~GY~lG~~~~rp~~~F~npeEerY 53 (130)
T 1xu0_A 19 SVAIGAAAGAIGGYMLGNAVGRMSYQFNNPMESRY 53 (130)
T ss_dssp ----------CCEEEEEEECCSCCCCCSSHHHHHH
T ss_pred HHHHHHHhhccchhhhcccCCCCCCCCCChHHHHH
Confidence 45667788889999999998877777776666553
No 64
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=75.45 E-value=5.5 Score=31.32 Aligned_cols=94 Identities=17% Similarity=0.141 Sum_probs=55.8
Q ss_pred EEEEEEEEeeCCCCCCCCCCCCCcEEEEEE-CCC-----CeEEeeec-CCCCCCCccceeEEEecCCCCC-CCceEEEEE
Q 023810 6 EVEVTITSAKDLKNVNWRHGPNRPYAVLWV-DPN-----KKCSTKVD-DEGDTCPYWDETLAIPLPGPVD-DDTTLIIDV 77 (277)
Q Consensus 6 ~L~V~v~~A~~L~~~~~~~g~~dpYv~v~l-d~~-----~~~~T~v~-~~~~~nP~WnE~f~f~v~~~~l-~~~~L~v~V 77 (277)
.|.|.|.+- +|++.. ...+||+.+++ |.+ ..+.|.+. ...+..-.||.++.+...-+.+ ++..|.||+
T Consensus 15 ~l~v~Ie~i-glkda~---~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfEl 90 (152)
T 2qzq_A 15 LLTLTIEKI-GLKDAG---QCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEF 90 (152)
T ss_dssp EEEEEEEEE-ECTTGG---GCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEEE
T ss_pred EEEEEEEEE-EeCCHH---HccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEEE
Confidence 355555554 776533 35689999998 432 34567663 2233445566666655433323 356788999
Q ss_pred EEccCCCCCCceeEEEEEecceeccc
Q 023810 78 VHAGNEEDTKKLIGSAKLKLKDVIND 103 (277)
Q Consensus 78 ~d~~~~~~~d~~iG~~~v~L~~l~~~ 103 (277)
.|.......-+..+.+-+.+++|..+
T Consensus 91 kH~k~kkkk~S~kCw~f~~~d~i~~g 116 (152)
T 2qzq_A 91 KHYKPKKRFTSTKCFAFMEMDEIKPG 116 (152)
T ss_dssp EEEETTTTEEEEEEEEEEEGGGCCSE
T ss_pred EEecccceeeeeeeEEEEEhhhcccC
Confidence 98764222223567788888877653
No 65
>1u3m_A CHPRP, prion-like protein; prion protein, TSE, membrane protein; NMR {Gallus gallus} SCOP: d.6.1.1
Probab=71.29 E-value=0.087 Score=39.22 Aligned_cols=31 Identities=26% Similarity=0.393 Sum_probs=25.1
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhHHHHhhh
Q 023810 236 GAVGGILGGLALAEGVDALEDHIADEAAEKV 266 (277)
Q Consensus 236 g~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~ 266 (277)
|+++|.|||.+|+.+|+..+-|+.++.++++
T Consensus 1 GAvvG~~gGY~lG~~m~r~~~~Fgnp~E~RY 31 (117)
T 1u3m_A 1 GSVVGGLGGYAMGRVMSGMNYHFDRPDEYRW 31 (117)
T ss_dssp CCSSSCSSCCEECCCCCCCSCCCCSHHHHHH
T ss_pred CcccccchhhhhcccCCCCCcCCCChHHHHH
Confidence 4567889999999999988888887777664
No 66
>1u5l_A Prion protein; pRNP, PRP, TSE, membrane protein; NMR {Trachemys scripta} SCOP: d.6.1.1
Probab=62.35 E-value=0.19 Score=36.96 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=22.4
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhHHHHhhh
Q 023810 237 AVGGILGGLALAEGVDALEDHIADEAAEKV 266 (277)
Q Consensus 237 ~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~ 266 (277)
+++|.|||.+|+.+|+...-|+..+.++++
T Consensus 2 avvgglggy~lg~ams~~~i~Fg~~~e~RY 31 (108)
T 1u5l_A 2 SVVGGLGGYALGSAMSGMRMNFDRPEERQW 31 (108)
T ss_dssp CSCSSCTTSEECCCCSSCCCCCSSHHHHHH
T ss_pred CceechhHHHHhhhhcCCccccCChHHHHH
Confidence 455668899999999887777777666553
No 67
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=58.02 E-value=11 Score=22.32 Aligned_cols=19 Identities=37% Similarity=0.508 Sum_probs=11.6
Q ss_pred CchhHHHHHHHHHHHhHhh
Q 023810 228 GMGTGLAVGAVGGILGGLA 246 (277)
Q Consensus 228 g~g~g~~~g~~~g~~gg~~ 246 (277)
|+..|+.+|++.|.+.|.+
T Consensus 7 ~ls~GaIAGiVvG~v~gv~ 25 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAA 25 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeeehHHHHHHH
Confidence 5555677777776655544
No 68
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=36.31 E-value=51 Score=22.69 Aligned_cols=9 Identities=11% Similarity=0.309 Sum_probs=4.6
Q ss_pred HHHHHHHHH
Q 023810 232 GLAVGAVGG 240 (277)
Q Consensus 232 g~~~g~~~g 240 (277)
++++|+++|
T Consensus 12 ~Iv~gvi~g 20 (79)
T 2knc_B 12 VVLLSVMGA 20 (79)
T ss_dssp HHHHHHHHH
T ss_pred hhHHHHHHH
Confidence 344555555
No 69
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=32.53 E-value=1.6e+02 Score=22.05 Aligned_cols=67 Identities=13% Similarity=0.255 Sum_probs=36.6
Q ss_pred ceeEEEecCCCCCCCceEEEEEEEccC-CCCCCceeEEEEEecceeccccCCCc-eeeEEEEeecCCCCCceEEEEEEE
Q 023810 56 DETLAIPLPGPVDDDTTLIIDVVHAGN-EEDTKKLIGSAKLKLKDVINDVGLGE-RASLTLKLKRPSGRPHGKVDVKVA 132 (277)
Q Consensus 56 nE~f~f~v~~~~l~~~~L~v~V~d~~~-~~~~d~~iG~~~v~L~~l~~~~~~~~-~~~~~~~L~~~sg~~~G~L~l~v~ 132 (277)
..+..|.... + ....+.|.||.-+. ....+.+||++.|. .+... ..+. ...+.|.+. ..|.|+|+++
T Consensus 49 ~k~~~f~t~~-d-nQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~--gipp~-p~G~~~IeVtf~iD-----~nGiL~V~a~ 117 (135)
T 1q5l_A 49 KHSQVFSTAE-D-NQSAVTIHVLQGERKRAADNKSLGQFNLD--GINPA-PRGMPQIEVTFDID-----ADGILHVSAK 117 (135)
T ss_dssp CCEEEECCCS-S-SCSSCEEEEEECCSSSCSSSEEEEEEECC--CCCSC-CSSSCCEEEEEEEC-----TTSEEEEEEE
T ss_pred eEeEEEEecc-C-CceEEEEEEEEeCCcccccCcEEEEEEEe--CCCCC-CCceeEEEEEEEEC-----CCCEEEEEEE
Confidence 3455555432 1 24568899998443 23456899997754 33322 1232 345666652 2566666654
No 70
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=29.96 E-value=1.9e+02 Score=22.15 Aligned_cols=74 Identities=12% Similarity=0.197 Sum_probs=38.9
Q ss_pred CCCCCCccceeEEEecCCCCCCCceEEEEEEEccC-CCCCCceeEEEEEecceeccccCCCc-eeeEEEEeecCCCCCce
Q 023810 48 EGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGN-EEDTKKLIGSAKLKLKDVINDVGLGE-RASLTLKLKRPSGRPHG 125 (277)
Q Consensus 48 ~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~-~~~~d~~iG~~~v~L~~l~~~~~~~~-~~~~~~~L~~~sg~~~G 125 (277)
.++.=|. ..+..|.-.. + ....+.|.||.-.+ ....+.+||++.|. .+.... .+. ...+.|.+. ..|
T Consensus 25 rnt~iP~-~k~~~f~t~~-d-nQ~~v~I~VyqGe~~~~~dn~~LG~f~l~--gipp~p-~G~~~IeVtf~iD-----~nG 93 (152)
T 3dob_A 25 RNTRIPT-KACKTFTTYA-D-NQPGVSIQVYEGERAMTRDNHRLGTFELS--GIPPAP-RGVPQIEVTFNID-----ANG 93 (152)
T ss_dssp TTCBSSE-EEEEEEEESS-T-TCCEEEEEEEESSCSBGGGSEEEEEEEEE--CCCCCC-TTCCCEEEEEEEC-----TTC
T ss_pred CcCccCE-EEEEEEEECC-C-CceEEEEEEEEcCccccccCceeEEEEEe--CCCCCC-CCCceEEEEEEeC-----CCC
Confidence 3344443 3444555432 1 24578899998442 23466899998775 333221 132 245566652 245
Q ss_pred EEEEEEE
Q 023810 126 KVDVKVA 132 (277)
Q Consensus 126 ~L~l~v~ 132 (277)
.|+|+..
T Consensus 94 iL~Vsa~ 100 (152)
T 3dob_A 94 ILNVSAE 100 (152)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 5555554
No 71
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=28.71 E-value=1.9e+02 Score=21.98 Aligned_cols=55 Identities=20% Similarity=0.339 Sum_probs=31.7
Q ss_pred CceEEEEEEEccC-CCCCCceeEEEEEecceeccccCCCc-eeeEEEEeecCCCCCceEEEEEEE
Q 023810 70 DTTLIIDVVHAGN-EEDTKKLIGSAKLKLKDVINDVGLGE-RASLTLKLKRPSGRPHGKVDVKVA 132 (277)
Q Consensus 70 ~~~L~v~V~d~~~-~~~~d~~iG~~~v~L~~l~~~~~~~~-~~~~~~~L~~~sg~~~G~L~l~v~ 132 (277)
...+.|.||.-.+ ....+.+||++.|. .+.... .+. ...+.|.+. ..|.|+|+..
T Consensus 44 Q~~v~i~VyqGe~~~~~dn~~LG~f~l~--gipp~p-~G~~~I~Vtf~iD-----~nGiL~V~a~ 100 (152)
T 3h0x_A 44 QPTVMIKVYEGERAMSKDNNLLGKFELT--GIPPAP-RGVPQIEVTFALD-----ANGILKVSAT 100 (152)
T ss_dssp CCCEEEEEEESSCSBGGGSEEEEEEEEC--CCCCCC-TTCSCEEEEEEEC-----TTSEEEEEEE
T ss_pred cceeeeeEEEcCccccccCcEEEEEEEe--CCCCCC-CCCceEEEEEEEc-----CCCEEEEEEE
Confidence 3568899998543 23466899998774 333221 232 345666652 2566666554
No 72
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=25.70 E-value=2.2e+02 Score=21.66 Aligned_cols=74 Identities=19% Similarity=0.290 Sum_probs=39.3
Q ss_pred CCCCCCccceeEEEecCCCCCCCceEEEEEEEccC-CCCCCceeEEEEEecceeccccCCCc-eeeEEEEeecCCCCCce
Q 023810 48 EGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGN-EEDTKKLIGSAKLKLKDVINDVGLGE-RASLTLKLKRPSGRPHG 125 (277)
Q Consensus 48 ~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~-~~~~d~~iG~~~v~L~~l~~~~~~~~-~~~~~~~L~~~sg~~~G 125 (277)
.++.=|. ..+..|.-.. + ....+.|.||.-.. ....+.+||++.|. .+.... .+. ...+.|.+. ..|
T Consensus 25 rnt~iP~-~k~~~f~t~~-d-nQ~~v~i~VyqGe~~~~~dn~~LG~f~l~--gipp~p-~G~~~IeVtf~iD-----~nG 93 (151)
T 3dqg_A 25 RNTTIPT-KKSQVFSTAA-D-GQTQVQIKVFQGEREMATSNKLLGQFSLV--GIPPAP-RGVPQVEVTFDID-----ANG 93 (151)
T ss_dssp TTCBSSE-EEEEEEEESS-T-TCCEEEEEEEESSCSBGGGSEEEEEEEEE--CCCCCC-TTCSCEEEEEEEC-----TTS
T ss_pred CcCccCE-EEEEEEEECC-C-CcceEEEEEEEcCCcccccCcEEEEEEEe--CCCCCC-CCCcEEEEEEEec-----cCc
Confidence 3344443 3444555432 1 24578899998543 23466799998774 333221 232 345666652 256
Q ss_pred EEEEEEE
Q 023810 126 KVDVKVA 132 (277)
Q Consensus 126 ~L~l~v~ 132 (277)
.|+|+..
T Consensus 94 iL~Vsa~ 100 (151)
T 3dqg_A 94 IVNVSAR 100 (151)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6666554
No 73
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=22.29 E-value=2.9e+02 Score=21.79 Aligned_cols=79 Identities=20% Similarity=0.275 Sum_probs=41.2
Q ss_pred eeecCCCCCCCccceeEEEecCCCCCCCceEEEEEEEccC-CCCCCceeEEEEEecceeccccCCCc-eeeEEEEeecCC
Q 023810 43 TKVDDEGDTCPYWDETLAIPLPGPVDDDTTLIIDVVHAGN-EEDTKKLIGSAKLKLKDVINDVGLGE-RASLTLKLKRPS 120 (277)
Q Consensus 43 T~v~~~~~~nP~WnE~f~f~v~~~~l~~~~L~v~V~d~~~-~~~~d~~iG~~~v~L~~l~~~~~~~~-~~~~~~~L~~~s 120 (277)
+.+-.+++.=|. ..+..|.-.. + ....+.|.||.-.+ ....+.+||++.|. .+.... .+. ...+.|.+.
T Consensus 40 ~~lI~rnt~iP~-~k~~~f~T~~-D-nQ~~v~I~VyqGE~~~~~dn~~LG~f~l~--gipp~p-~G~~~IeVtf~iD--- 110 (182)
T 3n8e_A 40 TKLINRNTTIPT-KKSQVFSTAA-D-GQTQVEIKVCQGEREMAGDNKLLGQFTLI--GIPPAP-RGVPQIEVTFDID--- 110 (182)
T ss_dssp EEEECTTCBSSE-EEEEEECCSS-T-TCCCEEEEEEESSCSBGGGSEEEEEEEEC--CCCCCC-TTCSCEEEEEEEC---
T ss_pred EEEEeCCCccCE-EEEEEEEECC-C-CccEEEEEEEEcCccccccCceEEEEEEc--CCCCCC-CCCeeEEEEEEEe---
Confidence 344234444453 3445554322 1 23568999998543 23466799987764 333221 132 345666652
Q ss_pred CCCceEEEEEEE
Q 023810 121 GRPHGKVDVKVA 132 (277)
Q Consensus 121 g~~~G~L~l~v~ 132 (277)
..|.|+|+..
T Consensus 111 --~nGiL~VsA~ 120 (182)
T 3n8e_A 111 --ANGIVHVSAK 120 (182)
T ss_dssp --TTCCEEEEEE
T ss_pred --cCCEEEEEEE
Confidence 2466666554
No 74
>3iz5_t 60S acidic ribosomal protein P11 - P1 (L12P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_t
Probab=20.08 E-value=23 Score=26.12 Aligned_cols=9 Identities=33% Similarity=1.010 Sum_probs=0.0
Q ss_pred hhhcccCCC
Q 023810 265 KVEDDLGYD 273 (277)
Q Consensus 265 ~~~~~~~~~ 273 (277)
+.|||++|+
T Consensus 99 EsddDmGfg 107 (110)
T 3iz5_t 99 ESDDDMGFS 107 (110)
T ss_dssp ---------
T ss_pred ccccccccc
Confidence 345566664
Done!