BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023815
MLLGRVKSEDDNKLKSFQAGFLKNLKSLYRFTRPNTLNGLVIAVTSICCLPLQNLGDLTP
TFFMEVFKTVVPAALMAIYMTAINQLVDVKIDKINKPDLPLASGDFSIKTGVAITLTCAM
MSLAMGIMIGSPPLAWGLILWFILVTAYSIDLPFLRWKRNAFLAAISIMIGYGVGIQFSF
FIHIQKYVLGRSVVITRSLIFTTGVITCMSLAKALLKDLHDVDGDKEYGIRTFSVMLGKE
RMIKELLNLFKNMDLEDESPLPGEGIDKPRGCEHVG

High Scoring Gene Products

Symbol, full name Information P value
HPT1
homogentisate phytyltransferase 1
protein from Arabidopsis thaliana 1.9e-53
SfN8DT-2
Naringenin 8-dimethylallyltransferase
protein from Sophora flavescens 2.1e-38
N8DT-1
Naringenin 8-dimethylallyltransferase 1, chloroplastic
protein from Sophora flavescens 1.0e-36
HST
homogentisate prenyltransferase
protein from Arabidopsis thaliana 9.3e-20

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023815
        (276 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044440 - symbol:HPT1 "homogentisate phytyltra...   553  1.9e-53   1
UNIPROTKB|B1B5P4 - symbol:SfN8DT-2 "Naringenin 8-dimethyl...   411  2.1e-38   1
UNIPROTKB|B1B3P3 - symbol:N8DT-1 "Naringenin 8-dimethylal...   395  1.0e-36   1
TAIR|locus:4010713740 - symbol:HST "homogentisate prenylt...   238  9.3e-20   1


>TAIR|locus:2044440 [details] [associations]
            symbol:HPT1 "homogentisate phytyltransferase 1"
            species:3702 "Arabidopsis thaliana" [GO:0004659 "prenyltransferase
            activity" evidence=IEA;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0010189 "vitamin E biosynthetic process"
            evidence=IMP;TAS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISS] [GO:0010176 "homogentisate
            phytyltransferase activity" evidence=IMP;IDA] [GO:0042362
            "fat-soluble vitamin biosynthetic process" evidence=TAS]
            [GO:0009266 "response to temperature stimulus" evidence=IMP]
            [GO:0009915 "phloem sucrose loading" evidence=IMP] [GO:0031347
            "regulation of defense response" evidence=IMP] [GO:0006636
            "unsaturated fatty acid biosynthetic process" evidence=RCA;IMP]
            [GO:0071555 "cell wall organization" evidence=IMP] [GO:0000096
            "sulfur amino acid metabolic process" evidence=RCA] [GO:0006546
            "glycine catabolic process" evidence=RCA] [GO:0006733
            "oxidoreduction coenzyme metabolic process" evidence=RCA]
            [GO:0006766 "vitamin metabolic process" evidence=RCA] [GO:0008652
            "cellular amino acid biosynthetic process" evidence=RCA]
            [GO:0009072 "aromatic amino acid family metabolic process"
            evidence=RCA] [GO:0009106 "lipoate metabolic process" evidence=RCA]
            [GO:0009108 "coenzyme biosynthetic process" evidence=RCA]
            [GO:0009117 "nucleotide metabolic process" evidence=RCA]
            [GO:0009416 "response to light stimulus" evidence=RCA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
            "leaf morphogenesis" evidence=RCA] [GO:0015994 "chlorophyll
            metabolic process" evidence=RCA] [GO:0019216 "regulation of lipid
            metabolic process" evidence=RCA] [GO:0019288 "isopentenyl
            diphosphate biosynthetic process, mevalonate-independent pathway"
            evidence=RCA] [GO:0019748 "secondary metabolic process"
            evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
            [GO:0031408 "oxylipin biosynthetic process" evidence=RCA]
            [GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR000537 Pfam:PF01040 UniPathway:UPA00160
            GO:GO:0016021 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006636 EMBL:AC003673 GO:GO:0071555 GO:GO:0009535
            GO:GO:0009266 GO:GO:0009915 GO:GO:0031347 eggNOG:COG0382
            GO:GO:0010189 EMBL:AF324344 EMBL:AY089963 EMBL:GU198365
            EMBL:AY063893 EMBL:AY113993 IPI:IPI00546170 PIR:T01623
            RefSeq:NP_849984.1 UniGene:At.27152 STRING:Q8VWJ1 PRIDE:Q8VWJ1
            GeneID:816412 KEGG:ath:AT2G18950 TAIR:At2g18950
            HOGENOM:HOG000264578 InParanoid:Q8VWJ1 KO:K09833 OMA:YQFIWKL
            PhylomeDB:Q8VWJ1 ProtClustDB:PLN02878 Genevestigator:Q8VWJ1
            GO:GO:0010176 Uniprot:Q8VWJ1
        Length = 393

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 108/248 (43%), Positives = 169/248 (68%)

Query:     4 GRVKSEDDNKLKSFQAGFLKNLKSLYRFTRPNTLNGLVIAVTSICCLPLQNLGDLTPTFF 63
             G+ ++ D N   S Q  F  +L + YRF+RP+T+ G V+++ S+  L ++ + D++P  F
Sbjct:    79 GQPEAFDSN---SKQKSFRDSLDAFYRFSRPHTVIGTVLSILSVSFLAVEKVSDISPLLF 135

Query:    64 MEVFKTVVPAALMAIYMTAINQLVDVKIDKINKPDLPLASGDFSIKTGVAITLTCAMMSL 123
               + + VV A +M IY+  +NQL DV+IDK+NKP LPLASG++S+ TG+AI  + ++MS 
Sbjct:   136 TGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSIMSF 195

Query:   124 AMGIMIGSPPLAWGLILWFILVTAYSIDLPFLRWKRNAFLAAISIMIGYGVGIQFSFFIH 183
              +G ++GS PL W L + F+L TAYSI+LP LRWKR A +AA+ I+    + +Q +F++H
Sbjct:   196 WLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYLH 255

Query:   184 IQKYVLGRSVVITRSLIFTTGVITCMSLAKALLKDLHDVDGDKEYGIRTFSVMLGKERMI 243
             IQ +V GR ++ TR LIF T  ++  S+  AL KD+ D++GDK +GIR+FSV LG++R+ 
Sbjct:   256 IQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRVF 315

Query:   244 KELLNLFK 251
                + L +
Sbjct:   316 WTCVTLLQ 323


>UNIPROTKB|B1B5P4 [details] [associations]
            symbol:SfN8DT-2 "Naringenin 8-dimethylallyltransferase"
            species:49840 "Sophora flavescens" [GO:0004659 "prenyltransferase
            activity" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR000537 Pfam:PF01040 GO:GO:0016021 GO:GO:0009507
            GO:GO:0004659 EMBL:AB370330 BioCyc:MetaCyc:MONOMER-16838
            Uniprot:B1B5P4
        Length = 407

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 81/218 (37%), Positives = 129/218 (59%)

Query:    25 LKSLYRFTRPNTLNGLVIAVTSICCLPLQNLGDLTPTFFMEVFKTVVPAALMAIYMTAIN 84
             L + Y+F RP  +  +V+  T    + ++ L DL+  FF+   + VV    + I+   +N
Sbjct:   111 LDTFYKFCRPYAIFSVVLGATFKSLVAVERLSDLSLAFFIGWLQVVVAVICIHIFDVGLN 170

Query:    85 QLVDVKIDKINKPDLPLASGDFSIKTGVAITLTCAMMSLAMGIMIGSPPLAWGLILWFIL 144
             QL D++IDKINKPDLPLASG+ S +  V IT +  ++ L    ++GS PL W + +  + 
Sbjct:   171 QLCDIEIDKINKPDLPLASGNLSFRNVVIITASSLILGLGFAWIVGSWPLFWTVFICCMF 230

Query:   145 VTAYSIDLPFLRWKRNAFLAAISIMIGYGVGIQFSFFIHIQKYVLGRSVVITRSLIFTTG 204
               AY++DLP LRWK+   L AIS +    V     FF+H+Q  V  R     R LIF T 
Sbjct:   231 AAAYNVDLPLLRWKKYPVLTAISFIANVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTA 290

Query:   205 VITCMSLAKALLKDLHDVDGDKEYGIRTFSVMLGKERM 242
             +++  ++  AL KD+ D++GD+++GI++ S+ LG +R+
Sbjct:   291 IVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRV 328


>UNIPROTKB|B1B3P3 [details] [associations]
            symbol:N8DT-1 "Naringenin 8-dimethylallyltransferase 1,
            chloroplastic" species:49840 "Sophora flavescens" [GO:0004659
            "prenyltransferase activity" evidence=IDA] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 GO:GO:0009507 GO:GO:0031969 GO:GO:0004659
            EMBL:AB325579 BioCyc:MetaCyc:MONOMER-16837 Uniprot:B1B3P3
        Length = 410

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 79/218 (36%), Positives = 128/218 (58%)

Query:    25 LKSLYRFTRPNTLNGLVIAVTSICCLPLQNLGDLTPTFFMEVFKTVVPAALMAIYMTAIN 84
             L   Y+F RP  +  +V+  T    + ++ L DL+  FF+   + VV    + I+   +N
Sbjct:   114 LDIFYKFCRPYAMFTIVLGATFKSLVAVEKLSDLSLAFFIGWLQVVVAVICIHIFGVGLN 173

Query:    85 QLVDVKIDKINKPDLPLASGDFSIKTGVAITLTCAMMSLAMGIMIGSPPLAWGLILWFIL 144
             QL D++IDKINKPDLPLASG  S +  V IT +  ++ L    ++ S PL W + +  ++
Sbjct:   174 QLCDIEIDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAWIVDSWPLFWTVFISCMV 233

Query:   145 VTAYSIDLPFLRWKRNAFLAAISIMIGYGVGIQFSFFIHIQKYVLGRSVVITRSLIFTTG 204
              +AY++DLP LRWK+   L AI+ +    V     FF+H+Q  V  R     R LIF T 
Sbjct:   234 ASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTA 293

Query:   205 VITCMSLAKALLKDLHDVDGDKEYGIRTFSVMLGKERM 242
             +++  ++  AL KD+ D++GD+++GI++ S+ LG +R+
Sbjct:   294 IVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRV 331


>TAIR|locus:4010713740 [details] [associations]
            symbol:HST "homogentisate prenyltransferase"
            species:3702 "Arabidopsis thaliana" [GO:0004161
            "dimethylallyltranstransferase activity" evidence=NAS] [GO:0004659
            "prenyltransferase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0010236 "plastoquinone biosynthetic process"
            evidence=IMP] [GO:0010355 "homogentisate farnesyltransferase
            activity" evidence=IDA] [GO:0010356 "homogentisate
            geranylgeranyltransferase activity" evidence=IDA] [GO:0010357
            "homogentisate solanesyltransferase activity" evidence=IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009536
            "plastid" evidence=IDA] [GO:0016117 "carotenoid biosynthetic
            process" evidence=IMP] InterPro:IPR000537 Pfam:PF01040
            GO:GO:0016021 EMBL:CP002686 GO:GO:0009941 GO:GO:0016117
            GO:GO:0010236 IPI:IPI00938788 RefSeq:NP_001154609.1
            UniGene:At.71046 PRIDE:F4J8K0 EnsemblPlants:AT3G11945.2
            GeneID:5007993 KEGG:ath:AT3G11945 KO:K12501 OMA:TIYSVPP
            GO:GO:0010355 GO:GO:0010356 GO:GO:0010357 Uniprot:F4J8K0
        Length = 393

 Score = 238 (88.8 bits), Expect = 9.3e-20, P = 9.3e-20
 Identities = 71/243 (29%), Positives = 120/243 (49%)

Query:     1 MLLGRVKSEDD--NKLKSFQAGFLKNLKSLYRFTRPNTLNGLVIAVTSICCLPL-QNLGD 57
             +L+G  +S+D   +++  FQ        + +RF RP+T+ G  +  T++    L +N   
Sbjct:    79 ILVGAAESDDPVLDRIARFQ-------NACWRFLRPHTIRGTALGSTALVTRALIENTHL 131

Query:    58 LTPTFFMEVFKTVVPAALMAIYMTAINQLVDVKIDKINKPDLPLASGDFSIKTGVAITLT 117
             +  +  ++    ++       Y+  INQ+ D+ IDK+NKP LP+A+GD S+++   + + 
Sbjct:   132 IKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIF 191

Query:   118 CAMMSL-AMGIMIGSPPLAWGLI-LWFILVTAYSIDLPFLRWKRNAFLAAISIMIGYGVG 175
              A+  L  +G   G  P    L  L   L T YS+  P LR KR    A + I    G  
Sbjct:   192 FAIAGLLVVGFNFG--PFITSLYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFL 247

Query:   176 IQFSFFIHIQKYVLGRSVVITRSLIFTTGVITCMSLAKALLKDLHDVDGDKEYGIRTFSV 235
             + F  + H  +  LG     +  + F T  +T  +L  A+ KDL DV+GD+++ I T + 
Sbjct:   248 LNFGVY-HATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLAT 306

Query:   236 MLG 238
              LG
Sbjct:   307 KLG 309


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.142   0.424    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      276       276   0.00079  115 3  11 22  0.42    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  184 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.62u 0.10s 21.72t   Elapsed:  00:00:02
  Total cpu time:  21.62u 0.10s 21.72t   Elapsed:  00:00:02
  Start:  Fri May 10 22:31:10 2013   End:  Fri May 10 22:31:12 2013

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