Your job contains 1 sequence.
>023816
MTTTNGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVD
SGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTII
VFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGA
EDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPSS
PSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMTISD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023816
(276 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025911 - symbol:ARR3 "response regulator 3" s... 351 3.3e-55 2
TAIR|locus:2194584 - symbol:ARR4 "response regulator 4" s... 352 1.4e-54 2
TAIR|locus:2170723 - symbol:ARR6 "response regulator 6" s... 300 1.6e-47 2
TAIR|locus:2097870 - symbol:RR5 "response regulator 5" sp... 294 2.9e-46 2
TAIR|locus:2027237 - symbol:ARR15 "response regulator 15"... 311 1.2e-45 2
TAIR|locus:2011286 - symbol:ARR7 "response regulator 7" s... 295 1.2e-45 2
TAIR|locus:2102509 - symbol:RR17 "response regulator 17" ... 274 3.5e-38 2
TAIR|locus:2080590 - symbol:ARR9 "response regulator 9" s... 247 7.3e-38 2
TAIR|locus:2040282 - symbol:RR3 "response regulator 3" sp... 246 2.4e-37 2
UNIPROTKB|Q4GZK2 - symbol:rr9 "Type A response regulator ... 239 2.7e-36 2
UNIPROTKB|Q4GZK7 - symbol:rr4 "Type A response regulator ... 222 2.7e-36 2
UNIPROTKB|Q4GZK8 - symbol:rr3 "Type A response regulator ... 205 1.1e-31 2
UNIPROTKB|Q4GZK5 - symbol:rr6 "Type A response regulator ... 187 1.3e-30 2
UNIPROTKB|Q4GZL0 - symbol:rr1 "Type A response regulator ... 201 4.7e-29 2
UNIPROTKB|Q4GZK4 - symbol:rr7 "Type A response regulator ... 163 8.4e-28 2
UNIPROTKB|Q4GZK3 - symbol:rr8 "Type A response regulator ... 159 1.9e-24 2
UNIPROTKB|Q4GZK9 - symbol:rr2 "Type A response regulator ... 136 4.5e-17 2
TAIR|locus:2054895 - symbol:AT2G07440 species:3702 "Arabi... 147 2.0e-10 1
TIGR_CMR|CPS_1520 - symbol:CPS_1520 "chemotaxis protein C... 93 3.3e-08 2
UNIPROTKB|Q48GG3 - symbol:cheY2 "Chemotaxis protein CheY"... 91 5.7e-08 2
TIGR_CMR|GSU_1286 - symbol:GSU_1286 "chemotaxis protein C... 102 1.0e-07 2
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 100 2.5e-07 2
TIGR_CMR|GSU_0403 - symbol:GSU_0403 "chemotaxis protein C... 93 3.5e-07 2
UNIPROTKB|Q4KG39 - symbol:cheY "Chemotaxis protein CheY" ... 88 1.7e-06 2
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 95 3.1e-06 2
DICTYBASE|DDB_G0284331 - symbol:regA "response regulator ... 115 4.0e-06 2
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 91 6.5e-06 2
TIGR_CMR|GSU_1285 - symbol:GSU_1285 "sensory box sensor h... 91 8.2e-06 2
UNIPROTKB|Q8EC92 - symbol:cheV "Chemotaxis signal transdu... 118 8.8e-06 2
TIGR_CMR|SO_3252 - symbol:SO_3252 "chemotaxis protein Che... 118 8.8e-06 2
TIGR_CMR|GSU_2535 - symbol:GSU_2535 "response regulator" ... 92 1.1e-05 2
TIGR_CMR|CJE_1261 - symbol:CJE_1261 "chemotaxis protein C... 85 1.1e-05 2
ASPGD|ASPL0000016988 - symbol:srrC species:162425 "Emeric... 102 2.0e-05 2
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 102 2.4e-05 2
TIGR_CMR|GSU_0598 - symbol:GSU_0598 "sigma-54 dependent D... 107 2.6e-05 2
TIGR_CMR|CJE_1664 - symbol:CJE_1664 "DNA-binding response... 81 2.8e-05 2
TIGR_CMR|SPO_1953 - symbol:SPO_1953 "phosphate regulon tr... 81 2.9e-05 2
TIGR_CMR|SO_0549 - symbol:SO_0549 "chemotaxis protein Che... 111 3.1e-05 2
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp... 88 3.4e-05 3
TAIR|locus:2061971 - symbol:CKI1 "CYTOKININ-INDEPENDENT 1... 126 3.6e-05 1
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 88 5.5e-05 2
TIGR_CMR|GSU_1038 - symbol:GSU_1038 "sensory box histidin... 91 0.00013 2
UNIPROTKB|Q3ADB1 - symbol:cheY1 "Chemotaxis protein CheY"... 81 0.00014 2
TIGR_CMR|CHY_1026 - symbol:CHY_1026 "chemotaxis protein C... 81 0.00014 2
TIGR_CMR|SO_3209 - symbol:SO_3209 "chemotaxis protein Che... 81 0.00015 2
UNIPROTKB|P71403 - symbol:cheY "Chemotaxis protein CheY h... 71 0.00018 2
UNIPROTKB|Q9KKK8 - symbol:VC_A1096 "Chemotaxis protein Ch... 94 0.00020 1
TIGR_CMR|VC_A1096 - symbol:VC_A1096 "chemotaxis protein C... 94 0.00020 1
UNIPROTKB|Q9KQD5 - symbol:VC_2065 "Chemotaxis protein Che... 80 0.00023 2
TIGR_CMR|VC_2065 - symbol:VC_2065 "chemotaxis protein Che... 80 0.00023 2
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 82 0.00029 2
TIGR_CMR|GSU_2219 - symbol:GSU_2219 "response regulator" ... 71 0.00034 2
DICTYBASE|DDB_G0282927 - symbol:dhkL "histidine kinase L"... 95 0.00042 2
UNIPROTKB|Q7Y0W3 - symbol:Q7Y0W3 "Two-component response ... 76 0.00050 2
UNIPROTKB|Q7Y0W5 - symbol:EHD1 "Two-component response re... 76 0.00050 2
TIGR_CMR|GSU_1316 - symbol:GSU_1316 "response regulator" ... 94 0.00054 2
TAIR|locus:2163198 - symbol:TOC1 "TIMING OF CAB EXPRESSIO... 90 0.00056 2
TIGR_CMR|SPO_3037 - symbol:SPO_3037 "DNA-binding response... 85 0.00069 2
TIGR_CMR|BA_0571 - symbol:BA_0571 "DNA-binding response r... 75 0.00092 2
TIGR_CMR|BA_4920 - symbol:BA_4920 "DNA-binding response r... 76 0.00095 2
TIGR_CMR|CPS_3950 - symbol:CPS_3950 "response regulator/G... 101 0.00095 2
>TAIR|locus:2025911 [details] [associations]
symbol:ARR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IDA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IDA;TAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=TAS] [GO:0010114
"response to red light" evidence=IMP] [GO:0010161 "red light
signaling pathway" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0042752 "regulation of circadian rhythm"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0007623 GO:GO:0006351 GO:GO:0042752 EMBL:AC007258
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008486 IPI:IPI00532280
PIR:T50853 RefSeq:NP_176202.1 UniGene:At.237
ProteinModelPortal:Q9ZWS9 SMR:Q9ZWS9 IntAct:Q9ZWS9 STRING:Q9ZWS9
EnsemblPlants:AT1G59940.1 GeneID:842288 KEGG:ath:AT1G59940
GeneFarm:4120 TAIR:At1g59940 eggNOG:COG3706 InParanoid:Q9ZWS9
OMA:RSEMIGI PhylomeDB:Q9ZWS9 ProtClustDB:CLSN2912722
Genevestigator:Q9ZWS9 GermOnline:AT1G59940 GO:GO:0010161
Uniprot:Q9ZWS9
Length = 231
Score = 351 (128.6 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 75/115 (65%), Positives = 88/115 (76%)
Query: 1 MTTTNGVASLR---LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVT 57
M GV+ LR +I I + P D+++VHVLAVDDS VDR VIERLL I+SCKVT
Sbjct: 1 MAKDGGVSCLRRSEMIGIGIGELESPPLDSDQVHVLAVDDSLVDRIVIERLLRITSCKVT 60
Query: 58 AVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPF 112
AVDSG RAL+FLGLD++++ FD LKVDLIITDYCMPGMTGYELLKKIK +T F
Sbjct: 61 AVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSF 115
Score = 236 (88.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
++S++ +E+PVVIMSSEN++ RIDRCLE+GAEDF++KPVKL+DVKR++ YLTRDV + E
Sbjct: 110 KESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLADVKRLRSYLTRDVKVAAE 169
Query: 210 GRGINKRK 217
G NKRK
Sbjct: 170 G---NKRK 174
>TAIR|locus:2194584 [details] [associations]
symbol:ARR4 "response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010017
"red or far-red light signaling pathway" evidence=IMP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;IMP;TAS]
[GO:0010114 "response to red light" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA;IMP] [GO:0042752
"regulation of circadian rhythm" evidence=IGI] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009963 "positive
regulation of flavonoid biosynthetic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0007623 GO:GO:0004674
GO:GO:0046777 GO:GO:0006351 GO:GO:0042752 GO:GO:0010114
GO:GO:0009793 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC007067 GO:GO:0010017
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2912722
EMBL:AB008487 EMBL:AB010915 EMBL:AF057282 IPI:IPI00523637
PIR:T48851 RefSeq:NP_172517.1 UniGene:At.22981 UniGene:At.67259
ProteinModelPortal:O82798 SMR:O82798 IntAct:O82798 STRING:O82798
EnsemblPlants:AT1G10470.1 GeneID:837587 KEGG:ath:AT1G10470
GeneFarm:4121 TAIR:At1g10470 InParanoid:O82798 OMA:KRIRDYM
PhylomeDB:O82798 Genevestigator:O82798 GermOnline:AT1G10470
Uniprot:O82798
Length = 259
Score = 352 (129.0 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 77/116 (66%), Positives = 89/116 (76%)
Query: 1 MTTTNGVASLR---LIS-DEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKV 56
M GV+ LR ++S I G + +P D +EVHVLAVDDS VDR VIERLL I+SCKV
Sbjct: 1 MARDGGVSCLRRSEMMSVGGIGGIESAPLDLDEVHVLAVDDSLVDRIVIERLLRITSCKV 60
Query: 57 TAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPF 112
TAVDSG RAL+FLGLD E++ FD LKVDLIITDYCMPGMTGYELLKKIK ++ F
Sbjct: 61 TAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNF 116
Score = 229 (85.7 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 46/71 (64%), Positives = 59/71 (83%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
++SS RE+PVVIMSSEN+L RIDRCLE+GA+DF++KPVKL+DVKR++ +LT+DV L N
Sbjct: 111 KESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVKRLRSHLTKDVKLSN- 169
Query: 210 GRGINKRKARE 220
G NKRK E
Sbjct: 170 G---NKRKLPE 177
>TAIR|locus:2170723 [details] [associations]
symbol:ARR6 "response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;TAS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009536 GO:GO:0006355 GO:GO:0006351 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K14492 ProtClustDB:CLSN2684027
EMBL:AB008489 EMBL:AB008491 EMBL:AB009053 EMBL:BT004799
IPI:IPI00547780 PIR:T50857 PIR:T50860 RefSeq:NP_201097.1
UniGene:At.24207 ProteinModelPortal:Q9ZWS6 SMR:Q9ZWS6 IntAct:Q9ZWS6
STRING:Q9ZWS6 EnsemblPlants:AT5G62920.1 GeneID:836412
KEGG:ath:AT5G62920 GeneFarm:4123 TAIR:At5g62920 InParanoid:Q9ZWS6
OMA:DDSQEIK PhylomeDB:Q9ZWS6 Genevestigator:Q9ZWS6
GermOnline:AT5G62920 Uniprot:Q9ZWS6
Length = 186
Score = 300 (110.7 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 60/85 (70%), Positives = 70/85 (82%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+ +HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E+ GF+ LKV+L
Sbjct: 23 DPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNL 82
Query: 88 IITDYCMPGMTGYELLKKIKVTTPF 112
I+TDY MPGMTGYELLKKIK ++ F
Sbjct: 83 IMTDYSMPGMTGYELLKKIKESSAF 107
Score = 214 (80.4 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 44/68 (64%), Positives = 56/68 (82%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
++SSA RE+PVVIMSSENIL RIDRCLE+GAEDF++KPVKLSDVKR++D L + +L
Sbjct: 102 KESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDVKRLRDSLMKVEDLSFT 161
Query: 210 GRGINKRK 217
+ I KR+
Sbjct: 162 -KSIQKRE 168
>TAIR|locus:2097870 [details] [associations]
symbol:RR5 "response regulator 5" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS;IMP] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=RCA;IMP;TAS] [GO:0010114 "response to red light"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0009536
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0010114 GO:GO:0009736 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AL049658
HOGENOM:HOG000034820 KO:K14492 EMBL:AB008488 EMBL:AB010916
EMBL:AF057281 EMBL:AY072390 EMBL:AY114698 IPI:IPI00516847
PIR:T06673 PIR:T50855 PIR:T50856 RefSeq:NP_190393.1
UniGene:At.24915 ProteinModelPortal:Q9SB04 SMR:Q9SB04 IntAct:Q9SB04
STRING:Q9SB04 EnsemblPlants:AT3G48100.1 GeneID:823965
KEGG:ath:AT3G48100 GeneFarm:4122 TAIR:At3g48100 InParanoid:Q9SB04
OMA:LEANDIY PhylomeDB:Q9SB04 ProtClustDB:CLSN2684027
Genevestigator:Q9SB04 GermOnline:AT3G48100 Uniprot:Q9SB04
Length = 184
Score = 294 (108.6 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 60/84 (71%), Positives = 69/84 (82%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDGLKVDLI 88
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E S GF+ LK++LI
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84
Query: 89 ITDYCMPGMTGYELLKKIKVTTPF 112
+TDY MPGMTGYELLKKIK ++ F
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSAF 108
Score = 208 (78.3 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++SSA REIPVVIMSSENIL RIDRCLE+GAEDF++KPVKL+DVKR++D L +
Sbjct: 103 KESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADVKRLRDSLMK 155
>TAIR|locus:2027237 [details] [associations]
symbol:ARR15 "response regulator 15" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=IGI;RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007623
"circadian rhythm" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AC008263 EMBL:AC013258
EMBL:AF305720 IPI:IPI00538856 RefSeq:NP_177627.1 UniGene:At.11589
ProteinModelPortal:Q7G8V2 SMR:Q7G8V2 IntAct:Q7G8V2 STRING:Q7G8V2
EnsemblPlants:AT1G74890.1 GeneID:843828 KEGG:ath:AT1G74890
GeneFarm:4128 TAIR:At1g74890 HOGENOM:HOG000034820 InParanoid:Q7G8V2
KO:K14492 OMA:KISACKV PhylomeDB:Q7G8V2 ProtClustDB:CLSN2914197
Genevestigator:Q7G8V2 GermOnline:AT1G74890 Uniprot:Q7G8V2
Length = 206
Score = 311 (114.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 62/86 (72%), Positives = 72/86 (83%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
LS S + E+HVLAVDDSFVDRKVIERLL IS+CKVT V+SG RALQ+LGLD + +G
Sbjct: 10 LSSSSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLK 69
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIK 107
LKV+LI+TDY MPG+TGYELLKKIK
Sbjct: 70 DLKVNLIVTDYSMPGLTGYELLKKIK 95
Score = 185 (70.2 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 35/53 (66%), Positives = 48/53 (90%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++SSALREIPVVIMSSENI RI++C+ +GAE+F++KPVKL+DVKR+K+ + R
Sbjct: 95 KESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLADVKRLKELIMR 147
>TAIR|locus:2011286 [details] [associations]
symbol:ARR7 "response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0009735 "response to cytokinin
stimulus" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=RCA] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0010200 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492
ProtClustDB:CLSN2914197 eggNOG:COG3706 EMBL:AB008490 EMBL:AC068602
IPI:IPI00536268 PIR:T50854 RefSeq:NP_173339.1 UniGene:At.238
ProteinModelPortal:Q9ZWS7 SMR:Q9ZWS7 IntAct:Q9ZWS7 STRING:Q9ZWS7
EnsemblPlants:AT1G19050.1 GeneID:838487 KEGG:ath:AT1G19050
GeneFarm:4124 TAIR:At1g19050 InParanoid:Q9ZWS7 OMA:LRISSCK
PhylomeDB:Q9ZWS7 Genevestigator:Q9ZWS7 GermOnline:AT1G19050
GO:GO:0019827 Uniprot:Q9ZWS7
Length = 206
Score = 295 (108.9 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 61/94 (64%), Positives = 75/94 (79%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
G DL+ + T E+HVLAVDDS VDRKVIERLL ISSCKVT V+SG RALQ+LGLD + +
Sbjct: 14 GGDLTVT-TPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGAS 72
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPF 112
LKV+LI+TDY MPG++GY+LLKKIK ++ F
Sbjct: 73 NLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAF 106
Score = 201 (75.8 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 44/77 (57%), Positives = 57/77 (74%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
++SSA RE+PVVIMSSENIL RI CL++GAE+F++KPVKL+DVKRIK + R N E
Sbjct: 101 KESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLADVKRIKQLIMR--NEAEE 158
Query: 210 GRGI---NKRKARESCD 223
+ + NKRK +E D
Sbjct: 159 CKILSHSNKRKLQEDSD 175
>TAIR|locus:2102509 [details] [associations]
symbol:RR17 "response regulator 17" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=TAS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005739 GO:GO:0005634
GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K14492
EMBL:AF305722 EMBL:AL163972 IPI:IPI00540746 PIR:T49039
RefSeq:NP_567037.1 UniGene:At.5240 ProteinModelPortal:Q9FPR6
SMR:Q9FPR6 STRING:Q9FPR6 EnsemblPlants:AT3G56380.1 GeneID:824805
KEGG:ath:AT3G56380 GeneFarm:4130 TAIR:At3g56380 InParanoid:Q9FPR6
OMA:MEEELHV PhylomeDB:Q9FPR6 ProtClustDB:CLSN2917444
Genevestigator:Q9FPR6 GermOnline:AT3G56380 Uniprot:Q9FPR6
Length = 153
Score = 274 (101.5 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 51/81 (62%), Positives = 67/81 (82%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG-LKVD 86
EE+HVLAVDD+ +DRK++ER+L ISSCKVT ++G RAL++LGL + Q + +KV+
Sbjct: 18 EELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVN 77
Query: 87 LIITDYCMPGMTGYELLKKIK 107
LIITDYCMPGMTG+ELLKK+K
Sbjct: 78 LIITDYCMPGMTGFELLKKVK 98
Score = 151 (58.2 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 29/51 (56%), Positives = 43/51 (84%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
++SS L+E+PVVI+SSENI RI++CL GA+ F+ KP+KLSDV+++K +L
Sbjct: 98 KESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLSDVEKLKCHL 148
>TAIR|locus:2080590 [details] [associations]
symbol:ARR9 "response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;IPI] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;IMP;TAS] [GO:0007623 "circadian rhythm"
evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 GO:GO:0009536 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0007623 GO:GO:0006351
GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
ProtClustDB:CLSN2683767 EMBL:AB010918 EMBL:AL138655 EMBL:AY090234
EMBL:AY133571 IPI:IPI00543561 PIR:T47764 RefSeq:NP_191263.1
UniGene:At.245 ProteinModelPortal:O80366 SMR:O80366 IntAct:O80366
STRING:O80366 EnsemblPlants:AT3G57040.1 GeneID:824871
KEGG:ath:AT3G57040 GeneFarm:4126 TAIR:At3g57040 InParanoid:O80366
OMA:GISTDRA PhylomeDB:O80366 Genevestigator:O80366
GermOnline:AT3G57040 Uniprot:O80366
Length = 234
Score = 247 (92.0 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 54/94 (57%), Positives = 67/94 (71%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL---DEEQSINGFDG--- 82
+ HVLAVDDS DRK+IERLL SSC+VT VDSG +AL+FLGL + N F
Sbjct: 8 QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPV 67
Query: 83 ----LKVDLIITDYCMPGMTGYELLKKIKVTTPF 112
++V+LIITDYCMPGMTGY+LLKK+K ++ F
Sbjct: 68 NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAF 101
Score = 175 (66.7 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 33/60 (55%), Positives = 49/60 (81%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
++SSA R+IPVVIMSSEN+ ARI RCLE+GAE+F +KPV+L+D+ ++K ++ + L N+
Sbjct: 96 KESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPVRLADLNKLKPHMMK-TKLKNQ 154
>TAIR|locus:2040282 [details] [associations]
symbol:RR3 "response regulator 3" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA;IMP;TAS] [GO:0007623 "circadian
rhythm" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=RCA] [GO:0048831 "regulation of shoot system
development" evidence=RCA] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009536
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0007623
GO:GO:0006351 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K14492 eggNOG:COG3706
EMBL:AB010917 EMBL:AC005662 EMBL:AY074643 IPI:IPI00535987
PIR:T48853 RefSeq:NP_181663.1 UniGene:At.244
ProteinModelPortal:O80365 SMR:O80365 IntAct:O80365 STRING:O80365
EnsemblPlants:AT2G41310.1 GeneID:818730 KEGG:ath:AT2G41310
GeneFarm:4125 TAIR:At2g41310 InParanoid:O80365 OMA:METESKF
PhylomeDB:O80365 ProtClustDB:CLSN2683767 Genevestigator:O80365
GermOnline:AT2G41310 Uniprot:O80365
Length = 225
Score = 246 (91.7 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 54/96 (56%), Positives = 69/96 (71%)
Query: 26 DTE-EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDG- 82
+TE + HVLAVDDS DRK+IERLL SSC+VT VDSG +AL+FLGL ++ N
Sbjct: 4 ETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTS 63
Query: 83 ------LKVDLIITDYCMPGMTGYELLKKIKVTTPF 112
++++LIITDYCMPGMTGY+LLKK+K + F
Sbjct: 64 PQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAF 99
Score = 171 (65.3 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 31/53 (58%), Positives = 45/53 (84%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++S+A R IPVVIMSSEN+ ARI RCLE+GAE+F +KPVKL+D+ ++K ++ +
Sbjct: 94 KESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLKPVKLADLTKLKPHMMK 146
>UNIPROTKB|Q4GZK2 [details] [associations]
symbol:rr9 "Type A response regulator 9" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0009735
GO:GO:0006355 GO:GO:0035556 GO:GO:0007623 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
EMBL:CM000136 EMBL:AJ938078 STRING:Q4GZK2 Uniprot:Q4GZK2
Length = 201
Score = 239 (89.2 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 54/82 (65%), Positives = 61/82 (74%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSINGFDG----LKV 85
HVLAVDDS DRK+IERLL SS +VT VDSG +AL+FLGL D E S + V
Sbjct: 10 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVAV 69
Query: 86 DLIITDYCMPGMTGYELLKKIK 107
+LIITDYCMPGMTGY+LLKKIK
Sbjct: 70 NLIITDYCMPGMTGYDLLKKIK 91
Score = 168 (64.2 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 30/53 (56%), Positives = 47/53 (88%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++SS LR+IPVVIMSS+NI +RI+RCLE+GA++F +KPV+LSD+ ++K ++ +
Sbjct: 91 KESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILK 143
>UNIPROTKB|Q4GZK7 [details] [associations]
symbol:rr4 "Type A response regulator 4" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000126
EMBL:AJ938073 Uniprot:Q4GZK7
Length = 232
Score = 222 (83.2 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 52/92 (56%), Positives = 64/92 (69%)
Query: 26 DTEE-VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE-------QSI 77
D E HVLAVDDS +DRK+IE LL SS +VT VDSG +AL+ LGL +E S
Sbjct: 5 DAESRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSS 64
Query: 78 NGFDGLKVD--LIITDYCMPGMTGYELLKKIK 107
+ D ++D LIITDYCMPGMTGY+LLK++K
Sbjct: 65 SSPDHQEIDVNLIITDYCMPGMTGYDLLKRVK 96
Score = 185 (70.2 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 34/51 (66%), Positives = 47/51 (92%)
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
SS+L++IPVVIMSSEN+ ARI+RCLEDGAE+F +KPVKL+D+K++K +L +
Sbjct: 98 SSSLKDIPVVIMSSENVPARINRCLEDGAEEFFLKPVKLADMKKLKSHLLK 148
>UNIPROTKB|Q4GZK8 [details] [associations]
symbol:rr3 "Type A response regulator 3" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 EMBL:CM000127 EMBL:AJ938072
STRING:Q4GZK8 Uniprot:Q4GZK8
Length = 131
Score = 205 (77.2 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 46/79 (58%), Positives = 54/79 (68%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E HVLAVDDS VDR VI RLL S +VT VDSG+RAL+ L LD V +I
Sbjct: 10 EPHVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSLDRN----------VHMI 59
Query: 89 ITDYCMPGMTGYELLKKIK 107
ITDYCMP MTG++LLK++K
Sbjct: 60 ITDYCMPEMTGFDLLKRVK 78
Score = 158 (60.7 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
++S+ L+EIPVV+MSSEN RI RCLE+GAEDF++KPV+ SDV R+
Sbjct: 78 KESAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLIKPVRPSDVSRL 124
>UNIPROTKB|Q4GZK5 [details] [associations]
symbol:rr6 "Type A response regulator 6" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0005737
GO:GO:0009735 GO:GO:0006355 GO:GO:0035556 GO:GO:0007623
GO:GO:0010114 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AJ938075 ProteinModelPortal:Q4GZK5 KEGG:dosa:Os04t0673300-01
Gramene:Q4GZK5 Uniprot:Q4GZK5
Length = 170
Score = 187 (70.9 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 43/79 (54%), Positives = 54/79 (68%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+HVLAVDDS VDR VI ++L S +VT V+S RAL+ L L ++N +I
Sbjct: 49 EMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLVPNVN--------MI 100
Query: 89 ITDYCMPGMTGYELLKKIK 107
ITDY MPGMTGYELLK++K
Sbjct: 101 ITDYWMPGMTGYELLKRVK 119
Score = 166 (63.5 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 32/47 (68%), Positives = 41/47 (87%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
++SS L+EIPVVIMSSEN+ RI RCLE+GAEDF++KPV+ SDV R+
Sbjct: 119 KESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRL 165
>UNIPROTKB|Q4GZL0 [details] [associations]
symbol:rr1 "Type A response regulator 1" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CM000129 EMBL:AJ938070 eggNOG:NOG76823
Uniprot:Q4GZL0
Length = 231
Score = 201 (75.8 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCK----VTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
VL VDDS VDR+V++ LL+ S+C V AVDS ++A++FLGL EE +D+
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQA-----IDM 64
Query: 88 IITDYCMPGMTGYELLKKIKVTTP 111
++TDYCMP MTGYELLK IK +P
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSP 88
Score = 137 (53.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 153 SALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL---TRDVNLGNE 209
S L+ IPV++MSSEN RI RC+ GAEDFIVKP++ DV+R++ T+ + G++
Sbjct: 87 SPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQSKDVQRLRKCSPANTQCCDAGSD 146
Query: 210 GR 211
G+
Sbjct: 147 GK 148
>UNIPROTKB|Q4GZK4 [details] [associations]
symbol:rr7 "Type A response regulator 7" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938076
ProteinModelPortal:Q4GZK4 KEGG:dosa:Os07t0449700-01 Gramene:Q4GZK4
Uniprot:Q4GZK4
Length = 206
Score = 163 (62.4 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 30/47 (63%), Positives = 41/47 (87%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
++SS L++IPVVIMSSEN+ RI RCLE+GAEDF++KPV+ +D+ RI
Sbjct: 154 KESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 200
Score = 163 (62.4 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 47/96 (48%), Positives = 55/96 (57%)
Query: 15 DEIDGFDLSPSDTEEV---HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL 71
DE D D D EE +V+AVDDS VDR VI LL S + DSG+RAL+ LG
Sbjct: 73 DEDDDDDDDEDDEEEAAPPYVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILGS 128
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ V +IITDY MP MTGY+LLKKIK
Sbjct: 129 EPN----------VSMIITDYWMPEMTGYDLLKKIK 154
>UNIPROTKB|Q4GZK3 [details] [associations]
symbol:rr8 "Type A response regulator 8" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:AJ938077 ProteinModelPortal:Q4GZK3
STRING:Q4GZK3 KEGG:dosa:Os08t0376700-01 KEGG:dosa:Os08t0377200-01
Gramene:Q4GZK3 Uniprot:Q4GZK3
Length = 121
Score = 159 (61.0 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDD+ VDR V+ L + +VTAV+S +AL FL D E VD+I++
Sbjct: 5 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL--DSEHD--------VDMIVS 54
Query: 91 DYCMPGMTGYELLKKIK 107
DYCMP MTGY LL ++K
Sbjct: 55 DYCMPDMTGYNLLMEVK 71
Score = 135 (52.6 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
S L +PVVI SS+NI RI +CL+ GA+D+I+KPVK+ DV RI Y+
Sbjct: 73 SPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDVPRIMKYI 121
>UNIPROTKB|Q4GZK9 [details] [associations]
symbol:rr2 "Type A response regulator 2" species:39946
"Oryza sativa Indica Group" [GO:0009735 "response to cytokinin
stimulus" evidence=IC] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0009735 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 EMBL:AJ938071
ProteinModelPortal:Q4GZK9 KEGG:dosa:Os02t0557800-01 Gramene:Q4GZK9
Uniprot:Q4GZK9
Length = 252
Score = 136 (52.9 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 158 IPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
IPVV+MSSEN RI RCL GAEDFI+KP+K++DV+R++
Sbjct: 114 IPVVVMSSENEPQRISRCLTAGAEDFILKPLKMNDVQRLR 153
Score = 119 (46.9 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 56 VTAVDSGRRALQFLGL---DEEQ-------SINGFDGLKVDLIITDYCMPGMTGYELLKK 105
VTAVDSG++A++ LG D + + + +D+++TDYCMP MTGY+LLK
Sbjct: 45 VTAVDSGKKAMELLGRRRGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKA 104
Query: 106 IK 107
IK
Sbjct: 105 IK 106
Score = 85 (35.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSC--------------KVTAVDSGRRALQFLG 70
E V VL VDDS VDR+V+E LL + C VTAVDSG++A++ LG
Sbjct: 4 EAVRVLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLG 59
>TAIR|locus:2054895 [details] [associations]
symbol:AT2G07440 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006217
IPI:IPI00531473 PIR:H84485 RefSeq:NP_178754.1 UniGene:At.63414
ProteinModelPortal:Q9ZQJ8 SMR:Q9ZQJ8 EnsemblPlants:AT2G07440.1
GeneID:815313 KEGG:ath:AT2G07440 TAIR:At2g07440 InParanoid:Q9ZQJ8
PhylomeDB:Q9ZQJ8 ArrayExpress:Q9ZQJ8 Genevestigator:Q9ZQJ8
Uniprot:Q9ZQJ8
Length = 136
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+S+A R I VVIMSSEN+ RI RCLE GAE+F +KPVKL D ++K ++ +
Sbjct: 9 ESAAFRSIHVVIMSSENVPTRISRCLEKGAEEFFLKPVKLVDHTKLKPHMMK 60
>TIGR_CMR|CPS_1520 [details] [associations]
symbol:CPS_1520 "chemotaxis protein CheY" species:167879
"Colwellia psychrerythraea 34H" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 OMA:LEANDIY
KO:K03413 RefSeq:YP_268262.1 ProteinModelPortal:Q485K3 SMR:Q485K3
STRING:Q485K3 GeneID:3522501 KEGG:cps:CPS_1520 PATRIC:21466247
BioCyc:CPSY167879:GI48-1601-MONOMER Uniprot:Q485K3
Length = 127
Score = 93 (37.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+ + VL VDD R++++ LL + + D G AL L G D D
Sbjct: 3 KNMKVLVVDDFSTMRRIVKNLLRDLGFTNIQEADDGNTALPML--------QGGD---FD 51
Query: 87 LIITDYCMPGMTGYELLKKIK 107
++TD+ MPGM G +LLK I+
Sbjct: 52 FVVTDWNMPGMQGIDLLKAIR 72
Score = 52 (23.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 155 LREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
L IPV+++++E +I + G +IVKP + +K
Sbjct: 77 LSHIPVLLITAEAKKEQIIMAAQAGVNGYIVKPFTAATLK 116
>UNIPROTKB|Q48GG3 [details] [associations]
symbol:cheY2 "Chemotaxis protein CheY" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413 RefSeq:YP_275520.1
ProteinModelPortal:Q48GG3 SMR:Q48GG3 STRING:Q48GG3 GeneID:3558182
KEGG:psp:PSPPH_3362 PATRIC:19976130 OMA:GHYDFLV
ProtClustDB:CLSK642753 Uniprot:Q48GG3
Length = 124
Score = 91 (37.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 32 VLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L VDD R++I+ LL + + D G AL L QS FD ++T
Sbjct: 3 ILIVDDFSTMRRIIKNLLRDLGFTNTSEADDGLTALPML-----QS-GAFD-----FLVT 51
Query: 91 DYCMPGMTGYELLKKIK 107
D+ MPGMTG +LL++++
Sbjct: 52 DWNMPGMTGIDLLRQVR 68
Score = 52 (23.4 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 155 LREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVN 205
L+ +PV+++++E +I + G ++VKP +K + + VN
Sbjct: 73 LKSLPVLMVTAEAKREQIIEAAQAGVNGYVVKPFTAQALKEKIEKIFERVN 123
>TIGR_CMR|GSU_1286 [details] [associations]
symbol:GSU_1286 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 RefSeq:NP_952339.1
ProteinModelPortal:Q74DN0 GeneID:2686542 KEGG:gsu:GSU1286
PATRIC:22025343 OMA:CMDIMMP ProtClustDB:CLSK2522233
BioCyc:GSUL243231:GH27-1254-MONOMER Uniprot:Q74DN0
Length = 131
Score = 102 (41.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 33 LAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQ-F-LGLDEEQSINGFDGLKVDLII 89
L V+D F+ RK+++ LLT + C + A D G A+Q F L LDE + DL+
Sbjct: 4 LIVEDDFISRKIMKELLTSLGECDI-ATD-GEEAVQAFRLALDEHRPY--------DLVC 53
Query: 90 TDYCMPGMTGYELLKKIK 107
D MP M G+E L++I+
Sbjct: 54 MDIMMPNMDGHEALEQIR 71
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/46 (21%), Positives = 26/46 (56%)
Query: 156 REIPVVIMSS-ENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDY 199
+E+ V++ ++ ++ ++ GA ++VKP+ K +K I+ +
Sbjct: 83 QEVKVIMTTALDDPKNVVEAFYRGGATSYLVKPITKQRLMKEIRSH 128
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 100 (40.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 16/59 (27%), Positives = 40/59 (67%)
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
+ A + IPV++MSS++ + + +C+ GA D+++KP++ +++K + ++ R + L ++
Sbjct: 106 EHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTLRDD 164
Score = 83 (34.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ + R++I LL KV AV G A + L +E+S N +DLI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL---KEKSHN------IDLIL 87
Query: 90 TDYCMPGMTGYELL 103
T+ +P ++G+ LL
Sbjct: 88 TELDLPSISGFALL 101
>TIGR_CMR|GSU_0403 [details] [associations]
symbol:GSU_0403 "chemotaxis protein CheY" species:243231
"Geobacter sulfurreducens PCA" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 HSSP:P06143
RefSeq:NP_951462.1 ProteinModelPortal:Q74G46 GeneID:2685717
KEGG:gsu:GSU0403 PATRIC:22023550 OMA:MEGKSID ProtClustDB:CLSK827806
BioCyc:GSUL243231:GH27-435-MONOMER Uniprot:Q74G46
Length = 120
Score = 93 (37.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+VL VDDS RK+I R L + V + F D + +N G VDLI++
Sbjct: 3 NVLIVDDSSTMRKIISRSLRQAGLPVDEI--------FEAGDGIEGLNVLSGKSVDLILS 54
Query: 91 DYCMPGMTGYELLKKIK 107
D MP M G E +K+ +
Sbjct: 55 DINMPNMDGLEFIKQAR 71
Score = 42 (19.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 159 PVVIMSSENILARIDRCLEDGAEDFIVKP 187
P+V++++E + + GA D I KP
Sbjct: 78 PIVMITTEGGEDILKEAISSGASDSIKKP 106
>UNIPROTKB|Q4KG39 [details] [associations]
symbol:cheY "Chemotaxis protein CheY" species:220664
"Pseudomonas protegens Pf-5" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0005622 GO:GO:0006935
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 KO:K03413 OMA:FGFVISD RefSeq:YP_258794.1
ProteinModelPortal:Q4KG39 SMR:Q4KG39 STRING:Q4KG39 GeneID:3477601
KEGG:pfl:PFL_1668 PATRIC:19872565 ProtClustDB:CLSK715044
BioCyc:PFLU220664:GIX8-1676-MONOMER Uniprot:Q4KG39
Length = 123
Score = 88 (36.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 32 VLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L VDD R++I+ LL + D G A+ L +G +D ++T
Sbjct: 3 ILIVDDFSTMRRIIKNLLRDLGFTNTVEADDGTTAIPVLN-------SG----SIDFLVT 51
Query: 91 DYCMPGMTGYELLKKIK 107
D+ MPGMTG +LL+ ++
Sbjct: 52 DWNMPGMTGIDLLRHVR 68
Score = 50 (22.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 155 LREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
L+ +PV+++++E +I + G ++VKP +K
Sbjct: 73 LKHLPVLMVTAEAKREQIIEAAQAGVNGYVVKPFTAQALK 112
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 95 (38.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VLAVDD K++E LL VT + ++AL+ L ++ N FD L+I
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELL----RENKNKFD-----LVI 67
Query: 90 TDYCMPGMTGYELLKKI 106
+D MP M G++LL+ +
Sbjct: 68 SDVDMPDMDGFKLLELV 84
Score = 81 (33.6 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 18/63 (28%), Positives = 39/63 (61%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR---DVNLGNEGRGI 213
++PV+++S+ + + + + GA D+++KPV++ ++K I ++ R D N G+ G
Sbjct: 89 DLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNG- 147
Query: 214 NKR 216
+KR
Sbjct: 148 DKR 150
>DICTYBASE|DDB_G0284331 [details] [associations]
symbol:regA "response regulator receiver
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0051281
"positive regulation of release of sequestered calcium ion into
cytosol" evidence=IMP] [GO:0051279 "regulation of release of
sequestered calcium ion into cytosol" evidence=IMP] [GO:0046058
"cAMP metabolic process" evidence=IMP] [GO:0031276 "negative
regulation of lateral pseudopodium assembly" evidence=IMP]
[GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity"
evidence=IDA;IMP] [GO:0005622 "intracellular" evidence=TAS]
[GO:0006970 "response to osmotic stress" evidence=TAS] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0047555 "3',5'-cyclic-GMP phosphodiesterase
activity" evidence=IDA] [GO:0006198 "cAMP catabolic process"
evidence=IDA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0004114 "3',5'-cyclic-nucleotide
phosphodiesterase activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0000156 "phosphorelay
response regulator activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030552 "cAMP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001789 InterPro:IPR002073 InterPro:IPR003607
InterPro:IPR023088 InterPro:IPR023174 Pfam:PF00072 Pfam:PF00233
PRINTS:PR00387 PROSITE:PS00126 PROSITE:PS50110 SMART:SM00448
SMART:SM00471 dictyBase:DDB_G0284331 GO:GO:0005829
GenomeReviews:CM000153_GR GO:GO:0006355 GO:GO:0035556 GO:GO:0046872
GO:GO:0030435 GO:GO:0030587 GO:GO:0005622 GO:GO:0006970
GO:GO:0051281 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG3706 EMBL:AAFI02000064 GO:GO:0030552 GO:GO:0031276
GO:GO:0004115 GO:GO:0006198 Gene3D:1.10.1300.10 EMBL:U60170
EMBL:AJ005398 RefSeq:XP_638612.1 ProteinModelPortal:Q23917
STRING:Q23917 EnsemblProtists:DDB0191479 GeneID:8624583
KEGG:ddi:DDB_G0284331 OMA:SHYETIC ProtClustDB:CLSZ2728943
Uniprot:Q23917
Length = 793
Score = 115 (45.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
+SD D + SPS +V +L DD V RK++ LL VT V +G A +++
Sbjct: 148 VSDFSDEY--SPS---KVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKG 202
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKI 106
++ K DL++TD MP +TG++LL++I
Sbjct: 203 QQ---------KYDLVLTDVMMPHITGFDLLQRI 227
Score = 59 (25.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 151 DSSALREIPVVIMSSENILARI-DRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDV 204
D R IPV++MS + + + ++ G +DF+ KP+ +K+ D + + +
Sbjct: 229 DHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSI 283
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 91 (37.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDD K++E++L S +VT R AL+ L E+ DG D++I
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL---RERK----DGY--DIVI 61
Query: 90 TDYCMPGMTGYELLKKI 106
+D MP M G++LL+ +
Sbjct: 62 SDVNMPDMDGFKLLEHV 78
Score = 81 (33.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 13/46 (28%), Positives = 33/46 (71%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++PV++MS + +R+ + ++ GA D+++KP+++ ++K I ++ R
Sbjct: 83 DLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLR 128
>TIGR_CMR|GSU_1285 [details] [associations]
symbol:GSU_1285 "sensory box sensor histidine
kinase/response regulator" species:243231 "Geobacter sulfurreducens
PCA" [GO:0000155 "phosphorelay sensor kinase activity"
evidence=ISS] [GO:0000156 "phosphorelay response regulator
activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR000014
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR008207 InterPro:IPR009082
Pfam:PF00072 Pfam:PF00512 Pfam:PF02518 PRINTS:PR00344
PROSITE:PS50110 PROSITE:PS50112 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 InterPro:IPR001610
GO:GO:0005524 GO:GO:0016020 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0000155 Gene3D:1.10.287.130
Gene3D:3.30.565.10 SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109
SUPFAM:SSF47226 InterPro:IPR013656 Pfam:PF08448 RefSeq:NP_952338.1
PDB:2R78 PDBsum:2R78 ProteinModelPortal:Q74DN1 SMR:Q74DN1
GeneID:2688111 KEGG:gsu:GSU1285 PATRIC:22025341
HOGENOM:HOG000144300 OMA:AHTNSER
BioCyc:GSUL243231:GH27-1253-MONOMER EvolutionaryTrace:Q74DN1
Uniprot:Q74DN1
Length = 772
Score = 91 (37.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 28/76 (36%), Positives = 38/76 (50%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDDS V RKV+ LL +VT G AL +G + FD L++ D
Sbjct: 548 VLLVDDSAVSRKVVSLLLESDGHRVTFAGDGVEALAAIGRE------AFD-----LVLMD 596
Query: 92 YCMPGMTGYELLKKIK 107
MP M G+E ++ I+
Sbjct: 597 VQMPVMDGFEAMRAIR 612
Score = 84 (34.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 12/39 (30%), Positives = 27/39 (69%)
Query: 158 IPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+P++ +++ + + CLE GA+D++ KPV S+++R+
Sbjct: 622 LPIIALTARALAGDRELCLEAGADDYLAKPVNFSELRRV 660
>UNIPROTKB|Q8EC92 [details] [associations]
symbol:cheV "Chemotaxis signal transduction system response
regulator CheV" species:211586 "Shewanella oneidensis MR-1"
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 InterPro:IPR002545
Pfam:PF00072 Pfam:PF01584 PROSITE:PS50110 PROSITE:PS50851
SMART:SM00260 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0016740 GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928 SUPFAM:SSF50341
HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181 PIRSF:PIRSF002867
OMA:QVSRCLQ RefSeq:NP_718806.1 ProteinModelPortal:Q8EC92
GeneID:1170945 KEGG:son:SO_3252 PATRIC:23526188
ProtClustDB:CLSK2304491 Uniprot:Q8EC92
Length = 306
Score = 118 (46.6 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
IS+E++ L+ T+ H++ +DDS V RK I R L + ++ GR AL L
Sbjct: 163 ISEEVNQ-QLTIDRTQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAI 221
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ N D ++ LII+D MP M GY L +I+
Sbjct: 222 ASEMNNVAD--EIPLIISDIEMPEMDGYTLTAEIR 254
Score = 40 (19.1 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVK 186
+D L+ I VV+ +S + + + GA DFI K
Sbjct: 254 RDDPKLKNIKVVLHTSLSGVFNQAMVQKVGANDFIAK 290
>TIGR_CMR|SO_3252 [details] [associations]
symbol:SO_3252 "chemotaxis protein CheV" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 InterPro:IPR002545 Pfam:PF00072 Pfam:PF01584
PROSITE:PS50110 PROSITE:PS50851 SMART:SM00260 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0016740 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P39928
SUPFAM:SSF50341 HOGENOM:HOG000255027 KO:K03415 InterPro:IPR024181
PIRSF:PIRSF002867 OMA:QVSRCLQ RefSeq:NP_718806.1
ProteinModelPortal:Q8EC92 GeneID:1170945 KEGG:son:SO_3252
PATRIC:23526188 ProtClustDB:CLSK2304491 Uniprot:Q8EC92
Length = 306
Score = 118 (46.6 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
IS+E++ L+ T+ H++ +DDS V RK I R L + ++ GR AL L
Sbjct: 163 ISEEVNQ-QLTIDRTQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAI 221
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ N D ++ LII+D MP M GY L +I+
Sbjct: 222 ASEMNNVAD--EIPLIISDIEMPEMDGYTLTAEIR 254
Score = 40 (19.1 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVK 186
+D L+ I VV+ +S + + + GA DFI K
Sbjct: 254 RDDPKLKNIKVVLHTSLSGVFNQAMVQKVGANDFIAK 290
>TIGR_CMR|GSU_2535 [details] [associations]
symbol:GSU_2535 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820
RefSeq:NP_953581.1 ProteinModelPortal:Q74A55 GeneID:2687797
KEGG:gsu:GSU2535 PATRIC:22027919 OMA:DLGCNVY
BioCyc:GSUL243231:GH27-2511-MONOMER Uniprot:Q74A55
Length = 147
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 32 VLAVDDSFVDRKVIER-LLTISSCK-VTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+L VDD ++IE+ L + + V +D+GRRAL F+ EE G L+ L+I
Sbjct: 9 ILLVDDDRGHARLIEKHLARMGGMQHVIWLDNGRRALDFIF--EEGEFEGVKTLRPCLVI 66
Query: 90 TDYCMPGMTGYELLKKIK 107
D MP + G +L ++K
Sbjct: 67 ADLNMPELGGVHVLSRLK 84
Score = 54 (24.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 158 IPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
I VVI+++ + A I+ C E G + F+ KP+
Sbjct: 92 IAVVILTTSDNPAEIEACHELGCDAFLRKPM 122
>TIGR_CMR|CJE_1261 [details] [associations]
symbol:CJE_1261 "chemotaxis protein CheY" species:195099
"Campylobacter jejuni RM1221" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 HOGENOM:HOG000034820 KO:K03413
OMA:DVLITDW ProtClustDB:CLSK872349 RefSeq:YP_179249.1
ProteinModelPortal:Q5HTY6 STRING:Q5HTY6 GeneID:3231768
KEGG:cjr:CJE1261 PATRIC:20044318
BioCyc:CJEJ195099:GJC0-1287-MONOMER Uniprot:Q5HTY6
Length = 130
Score = 85 (35.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 32 VLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L VDDS R++I+ LT + V + G A L +E+ V ++IT
Sbjct: 3 LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED----------VKVLIT 52
Query: 91 DYCMPGMTGYELLKKIK 107
D+ MP M G EL+KK++
Sbjct: 53 DWNMPEMNGLELVKKVR 69
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/45 (26%), Positives = 28/45 (62%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
++P++++++E A + L+ G ++IVKP +K +++D L
Sbjct: 76 DMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEDVL 120
>ASPGD|ASPL0000016988 [details] [associations]
symbol:srrC species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000160 "phosphorelay signal transduction system"
evidence=IEA] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:BN001302 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 EMBL:AACD01000067 RefSeq:XP_661738.1
ProteinModelPortal:Q5B5P6 EnsemblFungi:CADANIAT00004538
GeneID:2873550 KEGG:ani:AN4134.2 HOGENOM:HOG000200821
OrthoDB:EOG412QGQ Uniprot:Q5B5P6
Length = 171
Score = 102 (41.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+H+L +D+ V++K++ RLL SC V+ +G+ AL +L S + + D+I+
Sbjct: 2 MHILVAEDNKVNQKLVTRLLQRLSCTVSIAHNGQEALDYL------SASPATHHRPDVIL 55
Query: 90 TDYCMPGMTGYELLKKIKVTTPF 112
D MP M G ++ + PF
Sbjct: 56 MDTAMPVMDGIRATSILRTSLPF 78
Score = 43 (20.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/46 (21%), Positives = 25/46 (54%)
Query: 159 PVVIMS--SENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
P++ M+ S + + + L+ G +D + KP +L ++ + Y ++
Sbjct: 88 PIIAMTPISLRVPGQTEEWLKRGFDDVLPKPFRLETLRMMLLYWSK 133
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 102 (41.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 156 REIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
R IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 152 RNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWR 198
Score = 66 (28.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V++ R ++ LL S +V +G +A + L + +N +D+++
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL-----EDLNNH----IDIVL 128
Query: 90 TDYCMPGMTGYELLKKI 106
T+ MP ++G LL KI
Sbjct: 129 TEVIMPYLSGIGLLCKI 145
>TIGR_CMR|GSU_0598 [details] [associations]
symbol:GSU_0598 "sigma-54 dependent DNA-binding response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR002078
InterPro:IPR002197 InterPro:IPR003593 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00158 Pfam:PF02954 PROSITE:PS50045
PROSITE:PS50110 SMART:SM00382 SMART:SM00448 GO:GO:0005524
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000058489
InterPro:IPR025662 InterPro:IPR025943 InterPro:IPR025944
PROSITE:PS00675 PROSITE:PS00676 PROSITE:PS00688 HSSP:P06143
RefSeq:NP_951656.1 ProteinModelPortal:Q74FK9 GeneID:2688651
KEGG:gsu:GSU0598 PATRIC:22023947 OMA:SGMEVLK ProtClustDB:CLSK827940
BioCyc:GSUL243231:GH27-583-MONOMER Uniprot:Q74FK9
Length = 470
Score = 107 (42.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 33/84 (39%), Positives = 43/84 (51%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E + VL VDD + R+ + R+L V SG+ AL+ L DE L
Sbjct: 2 ENIDVLVVDDEAIIREGLRRILEKEGYHVETSASGQIALERLQ-DENYG----------L 50
Query: 88 IITDYCMPGMTGYELLKKIKVTTP 111
+ITD MPGM+G E+LK IKV P
Sbjct: 51 VITDLKMPGMSGMEVLKAIKVLQP 74
Score = 55 (24.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
E+PV+I++ + + +++GA D+I KP
Sbjct: 75 EVPVIIITGFSTVDTAVEAMKNGAFDYIAKP 105
>TIGR_CMR|CJE_1664 [details] [associations]
symbol:CJE_1664 "DNA-binding response regulator"
species:195099 "Campylobacter jejuni RM1221" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001789
InterPro:IPR001867 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0745
HOGENOM:HOG000034819 RefSeq:YP_179645.1 ProteinModelPortal:Q5HSU0
STRING:Q5HSU0 GeneID:3232292 KEGG:cjr:CJE1664 PATRIC:20045123
OMA:KRNICEL ProtClustDB:CLSK879286
BioCyc:CJEJ195099:GJC0-1694-MONOMER Uniprot:Q5HSU0
Length = 226
Score = 81 (33.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 12/44 (27%), Positives = 31/44 (70%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
++P+V++S+ + R+ R ++ G + +++KPV + ++ ++ DYL
Sbjct: 79 DVPIVVLSAYSEKERLLRSIDIGIDKYLIKPVDIEELFKVLDYL 122
Score = 76 (31.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ +E+ +L V+D R+ + +L+ KV +G ++ + F K
Sbjct: 4 ECKELIILVVEDEVKARESMINILSERFSKVIGAQNG-----------DEGLKKFKKFKP 52
Query: 86 DLIITDYCMPGMTGYELLKKIK 107
DL+ITD MP M G ++ ++IK
Sbjct: 53 DLVITDIAMPIMDGLDMAREIK 74
>TIGR_CMR|SPO_1953 [details] [associations]
symbol:SPO_1953 "phosphate regulon transcriptional
regulatory protein PhoB" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] [GO:0006817 "phosphate ion transport" evidence=ISS]
InterPro:IPR001789 InterPro:IPR001867 InterPro:IPR011879
Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110 SMART:SM00448
SMART:SM00862 GO:GO:0006355 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0006817 HOGENOM:HOG000034819 KO:K07657
TIGRFAMs:TIGR02154 RefSeq:YP_167188.1 ProteinModelPortal:Q5LS17
GeneID:3193549 KEGG:sil:SPO1953 PATRIC:23377237 OMA:STLMEKP
ProtClustDB:CLSK933701 Uniprot:Q5LS17
Length = 229
Score = 81 (33.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
++ VL V+D R+V+ L +V ++G A+ L +DE+ D+
Sbjct: 4 DQPSVLVVEDEMAQREVLAYNLEAEGFRVIRAENGEEAM--LLVDEDTP---------DI 52
Query: 88 IITDYCMPGMTGYELLKKIKVTTP 111
I+ D+ MP ++G E+ +++K T P
Sbjct: 53 IVLDWMMPNLSGIEVCRRLK-TRP 75
Score = 76 (31.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 156 REIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLTR 202
R IPV+++S+ + R LE GA+D++VKP + ++ R++ L R
Sbjct: 78 RSIPVIMLSARSEEVDKVRGLETGADDYVVKPYSVVELMARVRSQLRR 125
>TIGR_CMR|SO_0549 [details] [associations]
symbol:SO_0549 "chemotaxis protein CheY/response regulator
receiver domain protein" species:211586 "Shewanella oneidensis
MR-1" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0006935 "chemotaxis" evidence=ISS] InterPro:IPR001789
Pfam:PF00072 PROSITE:PS50110 SMART:SM00448 GO:GO:0006355
GO:GO:0035556 GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 HSSP:P06657
KO:K03413 RefSeq:NP_716185.2 ProteinModelPortal:Q8EJB8
GeneID:1168418 KEGG:son:SO_0549 PATRIC:23520780
HOGENOM:HOG000221832 OMA:SEANDAH ProtClustDB:CLSK905805
Uniprot:Q8EJB8
Length = 265
Score = 111 (44.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 37/101 (36%), Positives = 53/101 (52%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCK-VTAVDSGRRAL 66
A++ L+S D DLS D +V VL VDDS + R VI+R + K +T + G +A+
Sbjct: 125 ATIDLLSH--DELDLSHFDVHDVRVLVVDDSRMARNVIKRTIGNLGIKLITEAEDGAQAI 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ + N FD LIITDY MP + G L + I+
Sbjct: 183 ELM------RHNMFD-----LIITDYNMPSVDGLALTQFIR 212
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+ S +P++++SSE A + + G KP + VK++
Sbjct: 212 RSESQQSHVPILMVSSEANDAHLSNVSQAGVNALCDKPFEPKLVKQL 258
>TAIR|locus:2130095 [details] [associations]
symbol:RR2 "response regulator 2" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010029 "regulation of seed germination" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
GermOnline:AT4G16110 Uniprot:Q9ZWJ9
Length = 664
Score = 88 (36.0 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDD ++ER+L +VT + AL L ++ NGFD ++I
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLL----RKNKNGFD-----IVI 78
Query: 90 TDYCMPGMTGYELLKKI 106
+D MP M G++LL+ +
Sbjct: 79 SDVHMPDMDGFKLLEHV 95
Score = 78 (32.5 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 13/46 (28%), Positives = 32/46 (69%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++PV++MS+++ + + + + GA D+++KPV++ +K I ++ R
Sbjct: 100 DLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVR 145
Score = 37 (18.1 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 208 NEGRGINKRKARE 220
NEG G + RK +E
Sbjct: 186 NEGNGRSSRKRKE 198
>TAIR|locus:2061971 [details] [associations]
symbol:CKI1 "CYTOKININ-INDEPENDENT 1" species:3702
"Arabidopsis thaliana" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0000156 "phosphorelay response
regulator activity" evidence=IEA;TAS] [GO:0000160 "phosphorelay
signal transduction system" evidence=IEA] [GO:0004673 "protein
histidine kinase activity" evidence=IEA;ISS;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0018106 "peptidyl-histidine phosphorylation" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=TAS] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0080117 "secondary
growth" evidence=IMP] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001789 InterPro:IPR003594 InterPro:IPR003661
InterPro:IPR004358 InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512
Pfam:PF02518 PRINTS:PR00344 PROSITE:PS50110 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 GO:GO:0042803
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 GO:GO:0009736 GO:GO:0023014 GO:GO:0010087
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642 GO:GO:0004673
GO:GO:0080117 GO:GO:0009553 EMBL:AC002535 EMBL:D87545 EMBL:EF598269
EMBL:EF598270 EMBL:EF598271 EMBL:EF598272 EMBL:EF598273
EMBL:EF598274 EMBL:EF598275 EMBL:EF598276 EMBL:EF598277
EMBL:EF598278 EMBL:EF598279 EMBL:EF598280 EMBL:EF598281
EMBL:EF598282 EMBL:EF598283 EMBL:EF598284 EMBL:EF598285
EMBL:EF598286 EMBL:EF598287 EMBL:EF598288 EMBL:EF598289
EMBL:EF598290 EMBL:EF598291 IPI:IPI00546838 PIR:T00441
RefSeq:NP_182265.1 UniGene:At.341 PDB:3MM4 PDB:3MMN PDBsum:3MM4
PDBsum:3MMN ProteinModelPortal:O22267 SMR:O22267 IntAct:O22267
STRING:O22267 PaxDb:O22267 PRIDE:O22267 EnsemblPlants:AT2G47430.1
GeneID:819356 KEGG:ath:AT2G47430 TAIR:At2g47430
HOGENOM:HOG000114067 InParanoid:O22267 OMA:CPSSREL PhylomeDB:O22267
ProtClustDB:CLSN2913155 Genevestigator:O22267 Uniprot:O22267
Length = 1122
Score = 126 (49.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 24 PSDTEEVH---VLAVDDSFVDRKVIE-RLLTISSCKVTAVDSGRRALQFL--GLDEEQSI 77
PSD E + VL VDD+F+ RKV +L + +V DSG+ AL+ + GL + +
Sbjct: 977 PSDDEFLRGKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQ 1036
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
D L D I D MP M GYE ++I+
Sbjct: 1037 GSVDKLPFDYIFMDCQMPEMDGYEATREIR 1066
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 88 (36.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
+ EI+ D P + VLAVDD ++++ LL VT + + AL+ L
Sbjct: 3 MEQEIEVLDQFPVG---MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELL--- 56
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKI 106
++ N FD L+I+D MP M G++LL+ +
Sbjct: 57 -RENKNKFD-----LVISDVDMPDMDGFKLLELV 84
Score = 76 (31.8 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 15/67 (22%), Positives = 38/67 (56%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKR 216
++PV+++S+ + + + ++ GA D+++KPV++ ++K I ++ R L ++
Sbjct: 89 DLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNKSNVSNG 148
Query: 217 KARESCD 223
+CD
Sbjct: 149 SG--NCD 153
>TIGR_CMR|GSU_1038 [details] [associations]
symbol:GSU_1038 "sensory box histidine kinase/response
regulator" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000155 "phosphorelay sensor kinase activity" evidence=ISS]
[GO:0000156 "phosphorelay response regulator activity"
evidence=ISS] [GO:0000160 "phosphorelay signal transduction system"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 SMART:SM00091 SMART:SM00387
SMART:SM00388 SMART:SM00448 InterPro:IPR005467 GO:GO:0005524
GO:GO:0016020 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0023014 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0000155
Gene3D:1.10.287.130 Gene3D:3.30.565.10 SUPFAM:SSF55874
SUPFAM:SSF47384 PROSITE:PS50109 InterPro:IPR013656 Pfam:PF08448
RefSeq:NP_952091.1 ProteinModelPortal:Q74EC5 GeneID:2688721
KEGG:gsu:GSU1038 PATRIC:22024844 OMA:ECALENA
BioCyc:GSUL243231:GH27-1025-MONOMER Uniprot:Q74EC5
Length = 513
Score = 91 (37.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V RK++ L T+S +V + G RA++ F L DL++ D
Sbjct: 23 ILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEM-----------FRELSPDLVLLD 71
Query: 92 YCMPGMTGY 100
MP M GY
Sbjct: 72 IMMPVMDGY 80
Score = 68 (29.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 158 IPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+P++IM++ + I R + GA DFI KPV + YL R
Sbjct: 95 VPIIIMTALDDANSIGRAFDAGATDFIEKPVNWMLLNHRLPYLLR 139
>UNIPROTKB|Q3ADB1 [details] [associations]
symbol:cheY1 "Chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000034820 RefSeq:YP_359873.1 ProteinModelPortal:Q3ADB1
STRING:Q3ADB1 GeneID:3728270 KEGG:chy:CHY_1026 PATRIC:21275187
OMA:GATAWIT BioCyc:CHYD246194:GJCN-1025-MONOMER Uniprot:Q3ADB1
Length = 120
Score = 81 (33.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+LA+DDS + I+ L +V G AL LG + K DLIITD
Sbjct: 4 ILALDDSATMLQSIKISLLRKGHQVATFTKGSEALDMLGKE-----------KFDLIITD 52
Query: 92 YCMPGMTGYELLKKIKVTTPFNF 114
MP M G ++K++ + + F
Sbjct: 53 LNMPEMDGITFIQKVRALSNYKF 75
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 159 PVVIMSSENILARIDRCLEDGAEDFIVKP 187
PV+++++E+ A+ ++ GA +I KP
Sbjct: 77 PVIVLTTESQAAKKEQARRAGATAWITKP 105
>TIGR_CMR|CHY_1026 [details] [associations]
symbol:CHY_1026 "chemotaxis protein CheY" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0006935
"chemotaxis" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
eggNOG:COG0784 HOGENOM:HOG000034820 RefSeq:YP_359873.1
ProteinModelPortal:Q3ADB1 STRING:Q3ADB1 GeneID:3728270
KEGG:chy:CHY_1026 PATRIC:21275187 OMA:GATAWIT
BioCyc:CHYD246194:GJCN-1025-MONOMER Uniprot:Q3ADB1
Length = 120
Score = 81 (33.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+LA+DDS + I+ L +V G AL LG + K DLIITD
Sbjct: 4 ILALDDSATMLQSIKISLLRKGHQVATFTKGSEALDMLGKE-----------KFDLIITD 52
Query: 92 YCMPGMTGYELLKKIKVTTPFNF 114
MP M G ++K++ + + F
Sbjct: 53 LNMPEMDGITFIQKVRALSNYKF 75
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 159 PVVIMSSENILARIDRCLEDGAEDFIVKP 187
PV+++++E+ A+ ++ GA +I KP
Sbjct: 77 PVIVLTTESQAAKKEQARRAGATAWITKP 105
>TIGR_CMR|SO_3209 [details] [associations]
symbol:SO_3209 "chemotaxis protein CheY" species:211586
"Shewanella oneidensis MR-1" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 HOGENOM:HOG000034820 KO:K03413 OMA:GHYDFLV
HSSP:P06143 RefSeq:NP_718764.1 ProteinModelPortal:Q8ECD4 SMR:Q8ECD4
GeneID:1170902 KEGG:son:SO_3209 PATRIC:23526102
ProtClustDB:CLSK907053 Uniprot:Q8ECD4
Length = 127
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+ + +L VDD R++I+ LL + D G AL L + D
Sbjct: 3 KNMKILIVDDFSTMRRIIKNLLRDLGFNNTQEADDGSTALPMLQKGD-----------FD 51
Query: 87 LIITDYCMPGMTGYELLKKIK 107
++TD+ MPGM G +LLK I+
Sbjct: 52 FVVTDWNMPGMQGIDLLKAIR 72
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/45 (24%), Positives = 25/45 (55%)
Query: 154 ALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
+L+ +PV+++++E +I + G ++VKP + +K D
Sbjct: 76 SLKHLPVLMVTAEAKREQIIAAAQAGVNGYVVKPFTAATLKEKLD 120
>UNIPROTKB|P71403 [details] [associations]
symbol:cheY "Chemotaxis protein CheY homolog" species:85962
"Helicobacter pylori 26695" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005737 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0006935 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 eggNOG:COG0784 EMBL:AE000511
GenomeReviews:AE000511_GR GO:GO:0001539 KO:K03413 EMBL:X81897
EMBL:U97567 EMBL:AF021090 PIR:C64653 RefSeq:NP_207858.1
RefSeq:YP_006934983.1 PDB:3GWG PDB:3H1E PDB:3H1F PDB:3H1G
PDBsum:3GWG PDBsum:3H1E PDBsum:3H1F PDBsum:3H1G
ProteinModelPortal:P71403 DIP:DIP-3256N MINT:MINT-160671
GeneID:13870261 GeneID:899603 KEGG:heo:C694_05515 KEGG:hpy:HP1067
PATRIC:20593473 OMA:DVLITDW ProtClustDB:CLSK872349
EvolutionaryTrace:P71403 Uniprot:P71403
Length = 124
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 32 VLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L VDDS R++I+ L+ + V + G A + L + + + +IT
Sbjct: 3 LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKV----------LIT 52
Query: 91 DYCMPGMTGYELLKKIKVTTPF 112
D+ MP M G +L+KK++ + F
Sbjct: 53 DWNMPEMNGLDLVKKVRSDSRF 74
Score = 67 (28.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+ S +EIP++++++E A + L+ G ++IVKP
Sbjct: 69 RSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKP 106
>UNIPROTKB|Q9KKK8 [details] [associations]
symbol:VC_A1096 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 GO:GO:0005622
GO:GO:0006935 GO:GO:0004871 EMBL:AE003853 GenomeReviews:AE003853_GR
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 OMA:MEEELHV
KO:K03413 HSSP:P06143 PIR:D82380 RefSeq:NP_233476.1
ProteinModelPortal:Q9KKK8 DNASU:2612407 GeneID:2612407
KEGG:vch:VCA1096 PATRIC:20086710 ProtClustDB:CLSK789264
Uniprot:Q9KKK8
Length = 125
Score = 94 (38.1 bits), Expect = 0.00020, P = 0.00020
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLAVDDS R+++ L + +V GR AL + Q + D+II+D
Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREALA-----KAQKA------RFDVIISD 58
Query: 92 YCMPGMTGYELLKKIKVTTPFNF 114
MP MTG+E +K +++ + + F
Sbjct: 59 VNMPVMTGFEFVKAVRMQSQYKF 81
>TIGR_CMR|VC_A1096 [details] [associations]
symbol:VC_A1096 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 GO:GO:0005622 GO:GO:0006935
GO:GO:0004871 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 OMA:MEEELHV KO:K03413
HSSP:P06143 PIR:D82380 RefSeq:NP_233476.1 ProteinModelPortal:Q9KKK8
DNASU:2612407 GeneID:2612407 KEGG:vch:VCA1096 PATRIC:20086710
ProtClustDB:CLSK789264 Uniprot:Q9KKK8
Length = 125
Score = 94 (38.1 bits), Expect = 0.00020, P = 0.00020
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLAVDDS R+++ L + +V GR AL + Q + D+II+D
Sbjct: 10 VLAVDDSISIRQMVSHTLQDAGYEVETAADGREALA-----KAQKA------RFDVIISD 58
Query: 92 YCMPGMTGYELLKKIKVTTPFNF 114
MP MTG+E +K +++ + + F
Sbjct: 59 VNMPVMTGFEFVKAVRMQSQYKF 81
>UNIPROTKB|Q9KQD5 [details] [associations]
symbol:VC_2065 "Chemotaxis protein CheY" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004871 "signal
transducer activity" evidence=ISS] [GO:0006935 "chemotaxis"
evidence=ISS] InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0006355 GO:GO:0035556 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0006935 GO:GO:0004871
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413
OMA:GHYDFLV HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1
ProteinModelPortal:Q9KQD5 SMR:Q9KQD5 DNASU:2613445 GeneID:2613445
KEGG:vch:VC2065 PATRIC:20083164 ProtClustDB:CLSK874661
Uniprot:Q9KQD5
Length = 130
Score = 80 (33.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+ + +L VDD R++++ LL + D G AL L + D
Sbjct: 7 KNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGD-----------FD 55
Query: 87 LIITDYCMPGMTGYELLKKIK 107
++TD+ MPGM G +LLK I+
Sbjct: 56 FVVTDWNMPGMQGIDLLKNIR 76
Score = 54 (24.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 155 LREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L+ +PV+++++E +I + G +IVKP + +K D
Sbjct: 81 LKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLD 124
>TIGR_CMR|VC_2065 [details] [associations]
symbol:VC_2065 "chemotaxis protein CheY" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006935 "chemotaxis" evidence=ISS]
InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
GO:GO:0006355 GO:GO:0035556 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005622 GO:GO:0006935 GO:GO:0004871 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 KO:K03413 OMA:GHYDFLV
HSSP:P06143 PIR:C82123 RefSeq:NP_231697.1 ProteinModelPortal:Q9KQD5
SMR:Q9KQD5 DNASU:2613445 GeneID:2613445 KEGG:vch:VC2065
PATRIC:20083164 ProtClustDB:CLSK874661 Uniprot:Q9KQD5
Length = 130
Score = 80 (33.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+ + +L VDD R++++ LL + D G AL L + D
Sbjct: 7 KNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGD-----------FD 55
Query: 87 LIITDYCMPGMTGYELLKKIK 107
++TD+ MPGM G +LLK I+
Sbjct: 56 FVVTDWNMPGMQGIDLLKNIR 76
Score = 54 (24.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 155 LREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L+ +PV+++++E +I + G +IVKP + +K D
Sbjct: 81 LKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLD 124
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 82 (33.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDD ++ER+L +VT + AL L ++ +GFD ++I
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL----RKNKHGFD-----IVI 87
Query: 90 TDYCMPGMTGYELLKKI 106
+D MP M G++LL+ +
Sbjct: 88 SDVHMPDMDGFKLLEHV 104
Score = 78 (32.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 13/46 (28%), Positives = 32/46 (69%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++PV++MS+++ + + + + GA D+++KPV++ +K I ++ R
Sbjct: 109 DLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVR 154
>TIGR_CMR|GSU_2219 [details] [associations]
symbol:GSU_2219 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR001789 Pfam:PF00072
PROSITE:PS50110 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034820 HSSP:P08402
RefSeq:NP_953268.1 ProteinModelPortal:Q74AY0 GeneID:2685652
KEGG:gsu:GSU2219 PATRIC:22027293 OMA:VMLTAKK ProtClustDB:CLSK828762
BioCyc:GSUL243231:GH27-2166-MONOMER Uniprot:Q74AY0
Length = 123
Score = 71 (30.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/80 (30%), Positives = 36/80 (45%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E+ +L V+D K+ LL+ V V G+ AL ++ DL
Sbjct: 2 EKKRILIVEDEESLLKLESILLSSRGYAVAGVTDGKSALDYIAATPP-----------DL 50
Query: 88 IITDYCMPGMTGYELLKKIK 107
II D +PGM G+E+ + IK
Sbjct: 51 IILDIMLPGMDGFEVCQMIK 70
Score = 64 (27.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 156 REIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
R IPVV+++++ D+ LE GA ++ KP K + + I
Sbjct: 76 RHIPVVMLTAKKSTQDRDKGLEAGASAYVTKPFKSARIIEI 116
>DICTYBASE|DDB_G0282927 [details] [associations]
symbol:dhkL "histidine kinase L" species:44689
"Dictyostelium discoideum" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0023014 "signal transduction by
phosphorylation" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0000160
"phosphorelay signal transduction system" evidence=IEA] [GO:0000156
"phosphorelay response regulator activity" evidence=IEA]
[GO:0000155 "phosphorelay sensor kinase activity" evidence=IEA]
[GO:0004673 "protein histidine kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001789
InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358
InterPro:IPR009082 Pfam:PF00072 Pfam:PF00512 Pfam:PF02518
PRINTS:PR00344 PROSITE:PS50110 PROSITE:PS50112 PROSITE:PS50113
SMART:SM00091 SMART:SM00387 SMART:SM00388 SMART:SM00448
InterPro:IPR005467 InterPro:IPR001610 dictyBase:DDB_G0282927
GO:GO:0005525 GO:GO:0005524 GenomeReviews:CM000153_GR GO:GO:0016020
GO:GO:0006355 GO:GO:0035556 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 EMBL:AAFI02000049 GO:GO:0023014 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
HSSP:P39928 GO:GO:0000155 Gene3D:1.10.287.130 Gene3D:3.30.565.10
SUPFAM:SSF55874 SUPFAM:SSF47384 PROSITE:PS50109 eggNOG:COG0642
EMBL:AF362373 EMBL:AF258796 RefSeq:XP_639305.1
ProteinModelPortal:Q54RP6 EnsemblProtists:DDB0191389 GeneID:8623876
KEGG:ddi:DDB_G0282927 OMA:FIERNDT Uniprot:Q54RP6
Length = 1709
Score = 95 (38.5 bits), Expect = 0.00043, Sum P(2) = 0.00042
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD+ ++ +++ ++L C+V +V SG AL IN G D I D
Sbjct: 1571 VLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALA--------KINQSSGDSYDAIFLD 1622
Query: 92 YCMPGMTGYELLKKIK 107
MP M G+++ +KI+
Sbjct: 1623 IQMPDMDGFQVSRKIR 1638
Score = 70 (29.7 bits), Expect = 0.00043, Sum P(2) = 0.00042
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 161 VIMSSENILARID-RCLEDGAEDFIVKPVKLSDVKRI-KDY 199
+I ++ N+ +C + G +DFI KP+K +++K I K Y
Sbjct: 1651 IIATTANVFKEDQLKCFDAGMDDFISKPIKRAEIKEIIKKY 1691
>UNIPROTKB|Q7Y0W3 [details] [associations]
symbol:Q7Y0W3 "Two-component response regulator EHD1"
species:39946 "Oryza sativa Indica Group" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0048576 "positive regulation of short-day
photoperiodism, flowering" evidence=IMP] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
eggNOG:NOG265546 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB092508
ProteinModelPortal:Q7Y0W3 SMR:Q7Y0W3 KEGG:dosa:Os10t0463400-01
Gramene:Q7Y0W3 HOGENOM:HOG000084878 GO:GO:0048576 Uniprot:Q7Y0W3
Length = 341
Score = 76 (31.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 158 IPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
IP VIM+S + + + +GA DF++KPV++ ++ I ++ R
Sbjct: 84 IPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFR 128
Score = 75 (31.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL +DD V+E LL S KVT + R A+ F+ LD Q VDL+I
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFI-LDNPQI--------VDLVI 61
Query: 90 TDYCMPGMTGYELLKKIKVTTPF 112
+D P G +L++ VT+ F
Sbjct: 62 SDAFFPTEDGLLILQE--VTSKF 82
>UNIPROTKB|Q7Y0W5 [details] [associations]
symbol:EHD1 "Two-component response regulator EHD1"
species:39947 "Oryza sativa Japonica Group" [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:DP000086 EMBL:CM000147 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
InterPro:IPR017053 PIRSF:PIRSF036392 GO:GO:0048576 EMBL:AB092506
EMBL:AB092507 EMBL:AC027038 ProteinModelPortal:Q7Y0W5
Gramene:Q7Y0W5 eggNOG:KOG1601 Uniprot:Q7Y0W5
Length = 341
Score = 76 (31.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 158 IPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
IP VIM+S + + + +GA DF++KPV++ ++ I ++ R
Sbjct: 84 IPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFR 128
Score = 75 (31.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL +DD V+E LL S KVT + R A+ F+ LD Q VDL+I
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFI-LDNPQI--------VDLVI 61
Query: 90 TDYCMPGMTGYELLKKIKVTTPF 112
+D P G +L++ VT+ F
Sbjct: 62 SDAFFPTEDGLLILQE--VTSKF 82
>TIGR_CMR|GSU_1316 [details] [associations]
symbol:GSU_1316 "response regulator" species:243231
"Geobacter sulfurreducens PCA" [GO:0000156 "phosphorelay response
regulator activity" evidence=ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=ISS] InterPro:IPR003018
InterPro:IPR001789 Pfam:PF00072 Pfam:PF13185 PROSITE:PS50110
SMART:SM00065 SMART:SM00448 GO:GO:0006355 GO:GO:0035556
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:NP_952369.1
ProteinModelPortal:Q74DK0 DNASU:2685737 GeneID:2685737
KEGG:gsu:GSU1316 PATRIC:22025407 HOGENOM:HOG000276092 OMA:NMVLTDI
ProtClustDB:CLSK828294 BioCyc:GSUL243231:GH27-1295-MONOMER
Uniprot:Q74DK0
Length = 324
Score = 94 (38.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+ VL VD+S R I L VT+V SG E++++ + D++
Sbjct: 6 EIQVLVVDESAPSRAFIASTLENGGYIVTSVASG-----------EEAVHEVNAAPFDIL 54
Query: 89 ITDYCMPGMTGYELLKKIKVTTP 111
+TD +PGM+G LLK +K + P
Sbjct: 55 VTDINLPGMSGLNLLKLLKDSFP 77
Score = 53 (23.7 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
++ VVI++S + L GA DFI+KPV
Sbjct: 78 DLEVVIVTSNASSFTAIKALRLGAYDFIIKPV 109
>TAIR|locus:2163198 [details] [associations]
symbol:TOC1 "TIMING OF CAB EXPRESSION 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010031 "circumnutation" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072
Pfam:PF06203 PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0006351
GO:GO:0010629 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AB041530 EMBL:AF272039 EMBL:AJ251086 EMBL:AB010073
EMBL:AY094393 EMBL:BT005816 IPI:IPI00517214 PIR:T52075 PIR:T52076
RefSeq:NP_200946.1 UniGene:At.21919 ProteinModelPortal:Q9LKL2
SMR:Q9LKL2 IntAct:Q9LKL2 STRING:Q9LKL2 EnsemblPlants:AT5G61380.1
GeneID:836259 KEGG:ath:AT5G61380 GeneFarm:4313 TAIR:At5g61380
eggNOG:NOG242953 HOGENOM:HOG000034017 InParanoid:Q9LKL2 KO:K12127
OMA:IPIIMMS PhylomeDB:Q9LKL2 ProtClustDB:CLSN2686914
Genevestigator:Q9LKL2 GermOnline:AT5G61380 GO:GO:0010031
Uniprot:Q9LKL2
Length = 618
Score = 90 (36.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 16/48 (33%), Positives = 34/48 (70%)
Query: 155 LREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
LR IPV++MS ++ + + +CL+ GA D++VKP++ +++ + ++ R
Sbjct: 92 LRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWR 139
Score = 65 (27.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 24/89 (26%), Positives = 42/89 (47%)
Query: 18 DGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI 77
DGF D V +L D+ + LL+ S +VTAV S R+ + ++
Sbjct: 11 DGF----IDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVID--------AL 58
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKI 106
N +G +D+I+ + +P G ++L+ I
Sbjct: 59 NA-EGPDIDIILAEIDLPMAKGMKMLRYI 86
>TIGR_CMR|SPO_3037 [details] [associations]
symbol:SPO_3037 "DNA-binding response regulator, LysR
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000847 InterPro:IPR001789
Pfam:PF00072 Pfam:PF00126 PRINTS:PR00039 PROSITE:PS50110
PROSITE:PS50931 SMART:SM00448 GO:GO:0035556 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 RefSeq:YP_168241.1
ProteinModelPortal:Q5LP15 DNASU:3195987 GeneID:3195987
KEGG:sil:SPO3037 PATRIC:23379513 Uniprot:Q5LP15
Length = 269
Score = 85 (35.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 30/87 (34%), Positives = 43/87 (49%)
Query: 24 PSDTEEV-HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
P D EE+ +L VDD+ + + LL + ++ SG+ AL FL G
Sbjct: 106 PGDDEELPSLLVVDDTPQNIHHLHGLLK-DAYRIIPQTSGKGALSFLS-----------G 153
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVT 109
DLI+ D MP M GYE+ ++IK T
Sbjct: 154 ELADLILLDIRMPDMDGYEVCRQIKST 180
Score = 60 (26.2 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 15/52 (28%), Positives = 33/52 (63%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
+ +++L +IPV+ ++S + + LE GA DFI +P+ + ++ RI+ ++
Sbjct: 178 KSTASLADIPVIFLTSLDDPMDETKGLEMGACDFITRPIVPAILRARIRSHI 229
>TIGR_CMR|BA_0571 [details] [associations]
symbol:BA_0571 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 SUPFAM:SSF46894
HOGENOM:HOG000034815 HSSP:P08402 RefSeq:NP_843105.1
RefSeq:YP_017194.1 RefSeq:YP_026818.1 ProteinModelPortal:Q81YR2
DNASU:1087909 EnsemblBacteria:EBBACT00000010289
EnsemblBacteria:EBBACT00000017976 EnsemblBacteria:EBBACT00000019549
GeneID:1087909 GeneID:2816056 GeneID:2852340 KEGG:ban:BA_0571
KEGG:bar:GBAA_0571 KEGG:bat:BAS0540 OMA:TQQTIRY
ProtClustDB:CLSK915864 BioCyc:BANT260799:GJAJ-600-MONOMER
BioCyc:BANT261594:GJ7F-626-MONOMER Uniprot:Q81YR2
Length = 223
Score = 75 (31.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 74 EQSINGFDGLKV------DLIITDYCMPGMTGYELLKKI---KVTTPFNFL 115
+ ++NG DGL + D I+ D MP M G+E+++KI K+ TP FL
Sbjct: 27 DTALNGEDGLFLALQNIYDAILLDVMMPEMDGFEVIQKIRDEKIETPVLFL 77
Score = 68 (29.0 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 157 EIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLTRDVNL 206
E PV+ +++ + L + L+ G +D+IVKP + ++K RI+ L R +L
Sbjct: 71 ETPVLFLTARDSLEDRVKGLDFGGDDYIVKPFQAPELKARIRALLRRSGSL 121
>TIGR_CMR|BA_4920 [details] [associations]
symbol:BA_4920 "DNA-binding response regulator"
species:198094 "Bacillus anthracis str. Ames" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001789 InterPro:IPR001867
InterPro:IPR016032 Pfam:PF00072 Pfam:PF00486 PROSITE:PS50110
SMART:SM00448 SMART:SM00862 GO:GO:0006355 GO:GO:0035556
EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0005622 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034819
SUPFAM:SSF46894 HSSP:P08402 RefSeq:NP_847118.1 RefSeq:YP_021563.2
ProteinModelPortal:Q81KS0 DNASU:1084104
EnsemblBacteria:EBBACT00000011298 EnsemblBacteria:EBBACT00000014550
GeneID:1084104 GeneID:2819868 KEGG:ban:BA_4920 KEGG:bar:GBAA_4920
PATRIC:18787418 OMA:FFVTHPN ProtClustDB:CLSK882384
BioCyc:BANT261594:GJ7F-4779-MONOMER Uniprot:Q81KS0
Length = 229
Score = 76 (31.8 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 21/58 (36%), Positives = 40/58 (68%)
Query: 154 ALREIPVVIMSSENI-LARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYLTR-DVNLGN 208
A+++IP++++S++ + +I R L GA+D+I KP S+ V R+K +++R + LGN
Sbjct: 69 AIKDIPILLVSAKKEDIDKI-RGLGLGADDYITKPFSPSELVARVKAHISRYERLLGN 125
Score = 67 (28.6 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L ++D ++ L I+ +V SG LQ + L E+ DLII D
Sbjct: 4 ILLIEDEVSIAELQRDYLEINDFQVDVEHSGETGLQ-MALQEDY----------DLIILD 52
Query: 92 YCMPGMTGYELLKKIK 107
+P M G+E+ K+I+
Sbjct: 53 IMLPKMNGFEICKQIR 68
>TIGR_CMR|CPS_3950 [details] [associations]
symbol:CPS_3950 "response regulator/GGDEF domain protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000156
"phosphorelay response regulator activity" evidence=ISS]
[GO:0000160 "phosphorelay signal transduction system" evidence=ISS]
InterPro:IPR001054 InterPro:IPR001789 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 Pfam:PF00990 Pfam:PF00563 GO:GO:0006355 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF55073
GO:GO:0016849 GO:GO:0009190 InterPro:IPR000160 SMART:SM00267
TIGRFAMs:TIGR00254 PROSITE:PS50887 Gene3D:3.20.20.450
InterPro:IPR001633 SMART:SM00052 SUPFAM:SSF141868 PROSITE:PS50883
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 eggNOG:COG0784
HOGENOM:HOG000136246 RefSeq:YP_270608.1 ProteinModelPortal:Q47X62
STRING:Q47X62 GeneID:3523052 KEGG:cps:CPS_3950 PATRIC:21470787
OMA:NITEVES ProtClustDB:CLSK768238
BioCyc:CPSY167879:GI48-3963-MONOMER Uniprot:Q47X62
Length = 566
Score = 101 (40.6 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTIS--SCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ + VL VDD VDR++I+R L S SC +T V+S AL+ L ++ S
Sbjct: 2 QHMKVLIVDDDIVDRELIKRTLKRSDISCNITEVESVDDALKNL---QDSSF-------- 50
Query: 86 DLIITDYCMPGMTGYELLKKIK 107
D I+ DY +P G ELL +IK
Sbjct: 51 DAILLDYNLPQRNGIELLLEIK 72
Score = 49 (22.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 160 VVIMSS--ENILARIDRCLEDGAEDFIVK 186
V++MS+ E+ LA C+ GA+DF+VK
Sbjct: 82 VIMMSTSKEDELAL--NCINAGAQDFLVK 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 276 209 0.00079 112 3 11 22 0.38 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 551 (59 KB)
Total size of DFA: 139 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.85u 0.15s 15.00t Elapsed: 00:00:01
Total cpu time: 14.86u 0.15s 15.01t Elapsed: 00:00:01
Start: Fri May 10 22:33:07 2013 End: Fri May 10 22:33:08 2013