BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023816
(276 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296086487|emb|CBI32076.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/273 (59%), Positives = 178/273 (65%), Gaps = 56/273 (20%)
Query: 5 NGVASLRLISDEIDGFDLSPSDTEE-VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGR 63
+GV S R + DEI GFDLSP +EE HVLAVDDS VDRKVIERLL ISSCKVTAVDSGR
Sbjct: 4 SGVLSRRNMPDEIGGFDLSPGHSEEEAHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGR 63
Query: 64 RALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFL 123
RALQFLGLDEE++ G DGLKVDLIITDYCMPGMTGYELLKKIK ++ F
Sbjct: 64 RALQFLGLDEEKNSAGLDGLKVDLIITDYCMPGMTGYELLKKIKESSTF----------- 112
Query: 124 NLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDF 183
RE PVVIMSSENIL RIDRCLE+GAEDF
Sbjct: 113 --------------------------------RETPVVIMSSENILTRIDRCLEEGAEDF 140
Query: 184 IVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSS 243
IVKPVKLSDVKR+KDY+TR+ GNEGRGINKRK E+CD+S S S S SS SS S
Sbjct: 141 IVKPVKLSDVKRLKDYMTREDRDGNEGRGINKRKLGEACDVSPSLSSSPPSISSSSSSWS 200
Query: 244 PFRSPSILSSSAPCSPPSTLDSPTSRLKMTISD 276
S P++LDSPT RLK + D
Sbjct: 201 AP------------SSPTSLDSPTRRLKTSTCD 221
>gi|147768948|emb|CAN69259.1| hypothetical protein VITISV_026384 [Vitis vinifera]
Length = 210
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 149/211 (70%), Gaps = 44/211 (20%)
Query: 15 DEIDGFDLSPSDTEE-VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE 73
DEI GFDLSP +EE HVLAVDDS VDRKVIERLL ISSCKVTAVDSGRRALQFLGLDE
Sbjct: 3 DEIGGFDLSPGHSEEEAHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGLDE 62
Query: 74 EQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFIL 133
E++ G DGLKVDLIITDYCMPGMTGYELLKKIK
Sbjct: 63 EKNSAGLDGLKVDLIITDYCMPGMTGYELLKKIK-------------------------- 96
Query: 134 SICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
+SS RE PVVIMSSENIL RIDRCLE+GAEDFIVKPVKLSDV
Sbjct: 97 -----------------ESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKLSDV 139
Query: 194 KRIKDYLTRDVNLGNEGRGINKRKARESCDL 224
KR+KDY+TR+ GNEGRGINKRK E+CD+
Sbjct: 140 KRLKDYMTREDRDGNEGRGINKRKLGEACDV 170
>gi|255558348|ref|XP_002520201.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223540693|gb|EEF42256.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 258
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 191/294 (64%), Gaps = 70/294 (23%)
Query: 5 NGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRR 64
NG+AS R S++I+GF+ S D +EVHVLAVDDS VDRKVIERLL I+SCKVTAVDSGRR
Sbjct: 4 NGIASRRWRSEKIEGFEFSSCDNDEVHVLAVDDSLVDRKVIERLLKITSCKVTAVDSGRR 63
Query: 65 ALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLN 124
ALQFLGLDEE+S + GLKVDLIITDYCMPGMTGYELLKKIK
Sbjct: 64 ALQFLGLDEEKSTS-IQGLKVDLIITDYCMPGMTGYELLKKIK----------------- 105
Query: 125 LQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFI 184
+SS REIPVVIMSSEN++ARIDRCLE+GAEDF+
Sbjct: 106 --------------------------ESSTFREIPVVIMSSENVMARIDRCLEEGAEDFL 139
Query: 185 VKPVKLSDVKRIKDYLT-RDVNLGNE----------GRGINKRKARESCDLSSSPPSVIT 233
VKPVKLSDVKRI+DY+T R++ L ++ G +NKRK+R+S DLSSSPPS+
Sbjct: 140 VKPVKLSDVKRIRDYMTARELKLKSQQTSHNFNNSTGNNVNKRKSRDSFDLSSSPPSISF 199
Query: 234 SSSSPSSPSSPFRSPSILSS--------------SAPCSPPSTLDSPTSRLKMT 273
SSSS S S SPS S SAPCSP S LDSPT RLKM+
Sbjct: 200 SSSSLSPSPSSLSSPSSPSPCGSPSWSPSPMLSFSAPCSPTS-LDSPTRRLKMS 252
>gi|449434875|ref|XP_004135221.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
gi|449478516|ref|XP_004155339.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
Length = 233
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 147/220 (66%), Gaps = 44/220 (20%)
Query: 5 NGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRR 64
N + S R SD++DG D P+ EVHVLAVDDS VDR VIERLL +++C+VTAVDSG R
Sbjct: 4 NHIFSRRRRSDQLDGLDRFPTSDSEVHVLAVDDSLVDRTVIERLLRLTACRVTAVDSGIR 63
Query: 65 ALQFLGL-DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFL 123
ALQ+LGL DE S GFDGLKVD+IITDYCMPGMTGYELLKKIK
Sbjct: 64 ALQYLGLQDETNSQVGFDGLKVDMIITDYCMPGMTGYELLKKIK---------------- 107
Query: 124 NLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDF 183
+SS LREIPVVIMSSEN++ARIDRCLE+GAEDF
Sbjct: 108 ---------------------------ESSTLREIPVVIMSSENVVARIDRCLEEGAEDF 140
Query: 184 IVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCD 223
IVKPVKLSDVKR+++Y+ D GNE GINKRK RE CD
Sbjct: 141 IVKPVKLSDVKRLREYMVGDEKTGNERSGINKRKLREPCD 180
>gi|148608690|gb|ABQ95669.1| response regulator, partial [Malus x domestica]
Length = 209
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/252 (58%), Positives = 163/252 (64%), Gaps = 49/252 (19%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS-INGFDGLKVDLII 89
HVLAVDDS VDRKVIERLL ISSC+VT VDSGRRALQFLGLDEE+S GFDGLKVDLII
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGLDEEKSSTAGFDGLKVDLII 60
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TDYCMPGMTGYELLKKIK
Sbjct: 61 TDYCMPGMTGYELLKKIK------------------------------------------ 78
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT--RDVNLG 207
+SS + PVVIMSSEN+LARIDRCLE+GAEDFIVKPVKL+DVKR+KDY+T RDV +
Sbjct: 79 -ESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLADVKRLKDYMTTARDVGVE 137
Query: 208 NEGRGINKRKARESCD---LSSSPPSVITSSSSPSSPSSPFRSPSILSSSAPCSPPSTLD 264
G G+NKRK RE CD S P +S SS SS S SP + SS + S P+ LD
Sbjct: 138 ESGGGMNKRKLREPCDPTIAPSPPSIFPSSPSSSSSSPSKSPSPPLSSSFSAPSSPTPLD 197
Query: 265 SPTSRLKMTISD 276
SP RLKMT +D
Sbjct: 198 SPIRRLKMTNAD 209
>gi|148608687|gb|ABQ95668.1| response regulator, partial [Malus x domestica]
Length = 212
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 134/196 (68%), Gaps = 46/196 (23%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS-INGFDGLKVDLII 89
HVLAVDDS VDRKVIERLL ISSC+VT VDSGRRALQFLGLDEE+S GFDGLKVDLII
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGLDEEKSSTAGFDGLKVDLII 60
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TDYCMPGMTGYELLKKIK
Sbjct: 61 TDYCMPGMTGYELLKKIK------------------------------------------ 78
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT--RDVNLG 207
+SS + PVVIMSSEN+LARIDRCLE+GAEDFIVKPVKL+DVKR+KDY+T RDV +
Sbjct: 79 -ESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLADVKRLKDYMTTARDVGVE 137
Query: 208 NEGRGINKRKARESCD 223
G G+NKRK RE CD
Sbjct: 138 ESGGGMNKRKLREPCD 153
>gi|309951224|emb|CBX43982.1| putative A-type response regulator 1a [Populus x canadensis]
Length = 255
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 183/294 (62%), Gaps = 66/294 (22%)
Query: 3 TTNGVASLRLISDEIDGFDLSP---SDTEE--VHVLAVDDSFVDRKVIERLLTISSCKVT 57
++N +AS R +S+++DGFDLSP SD EE VHVLAVDDS VDRKVIERLL ISSCKVT
Sbjct: 2 SSNSIASNRWMSEKMDGFDLSPNSNSDNEEEGVHVLAVDDSLVDRKVIERLLKISSCKVT 61
Query: 58 AVDSGRRALQFLG-LDEEQSIN--------GFDGLKVDLIITDYCMPGMTGYELLKKIKV 108
AVDSG RAL+ LG LDEE + GFD LKVDLIITDYCMPGMTGYELLKKIK
Sbjct: 62 AVDSGWRALKLLGLLDEEDKSSSSSSSSSAGFDVLKVDLIITDYCMPGMTGYELLKKIKE 121
Query: 109 TTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENI 168
+T F REIPVVIMSSEN+
Sbjct: 122 STTF-------------------------------------------REIPVVIMSSENV 138
Query: 169 LARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL-TRDVN--LGNEGR---GINKRKARESC 222
+ARIDRCLE+GAEDFIVKPVKLSDVKRI+DY+ +R+V E R INKRK +E
Sbjct: 139 VARIDRCLEEGAEDFIVKPVKLSDVKRIRDYMASREVRSVQNQEERSSSNINKRKLQECF 198
Query: 223 D---LSSSPPSVITSSSSPSSPSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMT 273
D SS P +S S PS S SP L SS+ PS+LDSPT RLKMT
Sbjct: 199 DLSLSSSPPSISSSSLSYPSRSPSLTPSPPSLFSSSAPCSPSSLDSPTRRLKMT 252
>gi|309951226|emb|CBX43983.1| putative A-type response regulator 1b [Populus x canadensis]
Length = 257
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/239 (57%), Positives = 155/239 (64%), Gaps = 61/239 (25%)
Query: 3 TTNGVASLRLISDEIDGFDLSP---SDTEE--VHVLAVDDSFVDRKVIERLLTISSCKVT 57
++N +AS R +S+++DGFDLSP SD EE VHVLAVDDS VDRKVIERLL ISSCKVT
Sbjct: 2 SSNSIASNRWMSEKMDGFDLSPNSNSDNEEEGVHVLAVDDSLVDRKVIERLLKISSCKVT 61
Query: 58 AVDSGRRALQFLG-LDEEQSIN------GFDGLKVDLIITDYCMPGMTGYELLKKIKVTT 110
AVDSG RAL+ LG LDEE + GFD LKVDLIITDYCMPGMTGYELLKKIK +T
Sbjct: 62 AVDSGWRALKLLGLLDEEDKSSSSSSSAGFDVLKVDLIITDYCMPGMTGYELLKKIKEST 121
Query: 111 PFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILA 170
F REIPVVIMSSEN++A
Sbjct: 122 TF-------------------------------------------REIPVVIMSSENVVA 138
Query: 171 RIDRCLEDGAEDFIVKPVKLSDVKRIKDYL-TRDVN--LGNEGR---GINKRKARESCD 223
RIDRCLE+GAEDFIVKPVKLSDVKRI+DY+ +R+V E R INKRK +E D
Sbjct: 139 RIDRCLEEGAEDFIVKPVKLSDVKRIRDYMASREVRSVQNQEERSSSNINKRKLQECFD 197
>gi|297849384|ref|XP_002892573.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
gi|297338415|gb|EFH68832.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 142/302 (47%), Positives = 173/302 (57%), Gaps = 80/302 (26%)
Query: 1 MTTTNGVASLRLISD-EIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAV 59
M GV+ LR+ + G + +P D +EVHVLAVDDS VDR VIERLL I+SCKVTAV
Sbjct: 1 MARDGGVSCLRMSEMMNVGGIESAPLDLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAV 60
Query: 60 DSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
DSG RAL+FLGLD E++ FD LKVDLIITDYCMPGMTGYELLKKIK
Sbjct: 61 DSGWRALEFLGLDNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIK------------ 108
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
+SS RE+PVVIMSSEN+L RIDRCLE+G
Sbjct: 109 -------------------------------ESSNFREVPVVIMSSENVLTRIDRCLEEG 137
Query: 180 AEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCD---------------- 223
A+DF++KPVKL+DVKR++++LT+DV L N NKRK + D
Sbjct: 138 AQDFLLKPVKLADVKRLRNHLTKDVKLSNG----NKRKLPDDSDSVNSSLPPPSPPLTIS 193
Query: 224 LSSSPPSVITSSSSPSSP---------SSPFRSP----SILSSSAPCSPPSTLDSPTSRL 270
SSPP I++ SS SSP +SP +P +L++S SP DSP R
Sbjct: 194 PESSPPLTISTESSDSSPQLSPVEMFSTSPLSTPIDDDDVLTTSPESSPE---DSPIRRQ 250
Query: 271 KM 272
KM
Sbjct: 251 KM 252
>gi|224135721|ref|XP_002322144.1| type-a response regulator [Populus trichocarpa]
gi|222869140|gb|EEF06271.1| type-a response regulator [Populus trichocarpa]
gi|309951242|emb|CBX43991.1| putative A-type response regulator 10 [Populus x canadensis]
Length = 223
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/264 (51%), Positives = 160/264 (60%), Gaps = 48/264 (18%)
Query: 3 TTNGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
T G R +++E+ S S +EE+HVLAVDDSFVDRKVIERLL ISSCKVT V+SG
Sbjct: 2 ATAGEILRRSLTEEVGFSKGSVSGSEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESG 61
Query: 63 RRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
RALQ+LGLD E+S GF+ LK++LI+TDY MPGMTGYELLKKIK
Sbjct: 62 SRALQYLGLDGEKSSVGFNDLKINLIMTDYSMPGMTGYELLKKIK--------------- 106
Query: 123 LNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAED 182
+SSA REIPVVIMSSENILARIDRCLE+GAE+
Sbjct: 107 ----------------------------ESSAFREIPVVIMSSENILARIDRCLEEGAEE 138
Query: 183 FIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPS 242
+I+KPVKLSDVKRIKD + + R + KR RE C S S P ++ SSSSP+
Sbjct: 139 YILKPVKLSDVKRIKDVIMGGDGEQKKRRSVRKR-GREDCFYSLSQPQLVQSSSSPAFDF 197
Query: 243 SPFRSPSILSSSAPCSPPSTLDSP 266
PS L SS+P S S P
Sbjct: 198 ----LPSELQSSSPFSTLSLSKRP 217
>gi|224102663|ref|XP_002312769.1| type-a response regulator [Populus trichocarpa]
gi|222852589|gb|EEE90136.1| type-a response regulator [Populus trichocarpa]
Length = 258
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/241 (56%), Positives = 154/241 (63%), Gaps = 63/241 (26%)
Query: 3 TTNGVASLRLISDEIDGFDLSP---SDTEE--VHVLAVDDSFVDRKVIERLLTISSCKVT 57
++N +AS R +S+++DGFD SP SD EE VHVLAVDDS VDRKVIERLL ISSCKVT
Sbjct: 2 SSNSIASNRWMSEKMDGFDPSPNSNSDNEEEGVHVLAVDDSLVDRKVIERLLKISSCKVT 61
Query: 58 AVDSGRRALQFLG-LDEEQSIN--------GFDGLKVDLIITDYCMPGMTGYELLKKIKV 108
AVDSG RAL+ LG LDEE + GFD LKVDLIITDYCMPGMTGYELLKKIK
Sbjct: 62 AVDSGWRALKLLGLLDEEDKSSSSSSSSSAGFDVLKVDLIITDYCMPGMTGYELLKKIKE 121
Query: 109 TTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENI 168
+T F REIPVVIMSSEN+
Sbjct: 122 STTF-------------------------------------------REIPVVIMSSENV 138
Query: 169 LARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL-TRDVN--LGNEGR---GINKRKARESC 222
+ARIDRCLE+GAEDFIVKPVKLSDVKRI+DY+ +R+V E R INKRK +E
Sbjct: 139 VARIDRCLEEGAEDFIVKPVKLSDVKRIRDYMASREVRSVQNQEERSSSNINKRKLQECF 198
Query: 223 D 223
D
Sbjct: 199 D 199
>gi|224102495|ref|XP_002312699.1| type-a response regulator [Populus trichocarpa]
gi|222852519|gb|EEE90066.1| type-a response regulator [Populus trichocarpa]
Length = 247
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/289 (51%), Positives = 178/289 (61%), Gaps = 66/289 (22%)
Query: 4 TNGVASLRLISDEIDGFDLSPS-----DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTA 58
+N + S R +S++++ DLSP+ + EEVHVLAVDDSFVDRKVIERLL ISSCKVTA
Sbjct: 3 SNSIVSNRWMSEKMNCLDLSPNSNSDNEEEEVHVLAVDDSFVDRKVIERLLKISSCKVTA 62
Query: 59 VDSGRRALQFLGL--DEEQ----------SINGFDGLKVDLIITDYCMPGMTGYELLKKI 106
VDSG AL+ LGL DEE+ S GF+GLKVDLIITDYCMPGMTGYELLKKI
Sbjct: 63 VDSGWGALKLLGLLDDEEEDKSSSSSSSSSSAGFEGLKVDLIITDYCMPGMTGYELLKKI 122
Query: 107 KVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSE 166
K +SS+ REIPVVIMSSE
Sbjct: 123 K-------------------------------------------ESSSFREIPVVIMSSE 139
Query: 167 NILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL--TRDVNLGNEGRGINKRKARESCDL 224
N++ARIDRCLE+GAE+FI KPVKLSDVKR++DY TR++ +NKRK +ES D+
Sbjct: 140 NVMARIDRCLEEGAEEFIAKPVKLSDVKRLRDYYMATREIRSVQSSSNVNKRKLQESFDV 199
Query: 225 SSSPPSVITSSSSPSSPSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMT 273
S+S S S S + SP L SS+ PS+LDSPT R+KMT
Sbjct: 200 STSSSPPSISPSPSPSSA----SPPSLFSSSAPCSPSSLDSPTRRIKMT 244
>gi|15218957|ref|NP_176202.1| two-component response regulator ARR3 [Arabidopsis thaliana]
gi|51316126|sp|Q9ZWS9.1|ARR3_ARATH RecName: Full=Two-component response regulator ARR3
gi|5080824|gb|AAD39333.1|AC007258_22 response regulator 3 [Arabidopsis thaliana]
gi|3953595|dbj|BAA34725.1| response regulator 3 [Arabidopsis thaliana]
gi|89111918|gb|ABD60731.1| At1g59940 [Arabidopsis thaliana]
gi|110737841|dbj|BAF00859.1| hypothetical protein [Arabidopsis thaliana]
gi|332195521|gb|AEE33642.1| two-component response regulator ARR3 [Arabidopsis thaliana]
Length = 231
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/271 (49%), Positives = 163/271 (60%), Gaps = 52/271 (19%)
Query: 1 MTTTNGVASLR---LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVT 57
M GV+ LR +I I + P D+++VHVLAVDDS VDR VIERLL I+SCKVT
Sbjct: 1 MAKDGGVSCLRRSEMIGIGIGELESPPLDSDQVHVLAVDDSLVDRIVIERLLRITSCKVT 60
Query: 58 AVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYS 117
AVDSG RAL+FLGLD++++ FD LKVDLIITDYCMPGMTGYELLKKIK +T F
Sbjct: 61 AVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSF----- 115
Query: 118 TIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLE 177
+E+PVVIMSSEN++ RIDRCLE
Sbjct: 116 --------------------------------------KEVPVVIMSSENVMTRIDRCLE 137
Query: 178 DGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLS--SSPPSVITSS 235
+GAEDF++KPVKL+DVKR++ YLTRDV + EG NKRK S+ S+ +S
Sbjct: 138 EGAEDFLLKPVKLADVKRLRSYLTRDVKVAAEG---NKRKLTTPPPPPPLSATSSMESSD 194
Query: 236 SSPSSPSSPFRSPSILSSSAPCSPPSTLDSP 266
S+ SP S L+ S P S S +DSP
Sbjct: 195 STVESPLSMVDDEDSLTMS-PESATSLVDSP 224
>gi|224135725|ref|XP_002322145.1| type-a arp3-like response regulator [Populus trichocarpa]
gi|222869141|gb|EEF06272.1| type-a arp3-like response regulator [Populus trichocarpa]
Length = 192
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 148/235 (62%), Gaps = 44/235 (18%)
Query: 3 TTNGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
T G R +++E+ S S +EE+HVLAVDDSFVDRKVIERLL ISSCKVT V+SG
Sbjct: 2 ATAGEILRRSLTEEVGFSKGSVSGSEELHVLAVDDSFVDRKVIERLLKISSCKVTVVESG 61
Query: 63 RRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
RALQ+LGLD E+S GF+ LK++LI+TDY MPGMTGYELLKKIK
Sbjct: 62 SRALQYLGLDGEKSSVGFNDLKINLIMTDYSMPGMTGYELLKKIK--------------- 106
Query: 123 LNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAED 182
+SSA REIPVVIMSSENILARIDRCLE+GAE+
Sbjct: 107 ----------------------------ESSAFREIPVVIMSSENILARIDRCLEEGAEE 138
Query: 183 FIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLSSSPPSVITSSSS 237
+I+KPVKLSDVKRIKD + + R + KR RE C S S P ++ SSSS
Sbjct: 139 YILKPVKLSDVKRIKDVIMGGDGEQKKRRSVRKR-GREDCFYSLSQPQLVQSSSS 192
>gi|125658123|gb|ABN48988.1| type A response regulator RR1 [Phaseolus vulgaris]
Length = 227
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 141/219 (64%), Gaps = 54/219 (24%)
Query: 14 SDEIDGFD-LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
+D + FD +SP D+ EVHVLAVDDS VDRKVIERLL IS+CKVTAVDSG RALQFLGLD
Sbjct: 3 TDGLVSFDHISPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLD 62
Query: 73 EEQSINGFDG----LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNL 128
E++ + DG LKVDLIITDYCMP MTGYELLKKIK
Sbjct: 63 EQRRTSESDGFVPSLKVDLIITDYCMPEMTGYELLKKIK--------------------- 101
Query: 129 FLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+SS REIPVVIMSSENIL RIDRCLE+GAEDFIVKPV
Sbjct: 102 ----------------------ESSMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPV 139
Query: 189 KLSDVKRIKDYL-TRDVNLGNEGRGI-----NKRKARES 221
KLSDVKR+K Y+ TR+V +G+ RG NKRK E
Sbjct: 140 KLSDVKRLKGYMTTREVKVGSHDRGSGVEINNKRKLEEE 178
>gi|13173408|gb|AAK14395.1|AF339732_1 response regulator protein [Dianthus caryophyllus]
Length = 264
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/227 (53%), Positives = 138/227 (60%), Gaps = 47/227 (20%)
Query: 2 TTTNGVASLRLISDEIDGFDLSPSDTE-EVHVLAVDDSFVDRKVIERLLTISSCKVTAVD 60
T NGV S R + DL PSD E HVLAVDDS +DRKVIERLL +SCKVT VD
Sbjct: 7 TARNGVVSTRRWKSDT-CIDLGPSDVRSEAHVLAVDDSLIDRKVIERLLKTTSCKVTVVD 65
Query: 61 SGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTII 120
SG RAL+FLGLD EQ + DGLK+DLIITDYCMPGMTGYELLKKIK
Sbjct: 66 SGMRALEFLGLDAEQRTSVVDGLKIDLIITDYCMPGMTGYELLKKIK------------- 112
Query: 121 VFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGA 180
+SS +E PVVIMSSEN++ARIDRCLE+GA
Sbjct: 113 ------------------------------ESSTFKETPVVIMSSENVIARIDRCLEEGA 142
Query: 181 EDFIVKPVKLSDVKRIKDYLTRDVNLGNEG--RGINKRKARESCDLS 225
EDFI+KPVKLSDVKR++DY+T + N G NKRK + D S
Sbjct: 143 EDFILKPVKLSDVKRLRDYMTNKYDKSNSRVISGTNKRKQMDGSDQS 189
>gi|15218550|ref|NP_172517.1| two-component response regulator ARR4 [Arabidopsis thaliana]
gi|51315817|sp|O82798.1|ARR4_ARATH RecName: Full=Two-component response regulator ARR4; AltName:
Full=Response regulator 1
gi|5091539|gb|AAD39568.1|AC007067_8 T10O24.8 [Arabidopsis thaliana]
gi|3273196|dbj|BAA31143.1| responce regulator1 [Arabidopsis thaliana]
gi|3323583|gb|AAC26636.1| two-component response regulator homolog [Arabidopsis thaliana]
gi|3953597|dbj|BAA34726.1| response regulator 4 [Arabidopsis thaliana]
gi|87116590|gb|ABD19659.1| At1g10470 [Arabidopsis thaliana]
gi|110740750|dbj|BAE98474.1| putative response regulator 3 [Arabidopsis thaliana]
gi|332190462|gb|AEE28583.1| two-component response regulator ARR4 [Arabidopsis thaliana]
Length = 259
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 140/221 (63%), Gaps = 51/221 (23%)
Query: 1 MTTTNGVASLR----LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKV 56
M GV+ LR + I G + +P D +EVHVLAVDDS VDR VIERLL I+SCKV
Sbjct: 1 MARDGGVSCLRRSEMMSVGGIGGIESAPLDLDEVHVLAVDDSLVDRIVIERLLRITSCKV 60
Query: 57 TAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLY 116
TAVDSG RAL+FLGLD E++ FD LKVDLIITDYCMPGMTGYELLKKIK
Sbjct: 61 TAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIK--------- 111
Query: 117 STIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCL 176
+SS RE+PVVIMSSEN+L RIDRCL
Sbjct: 112 ----------------------------------ESSNFREVPVVIMSSENVLTRIDRCL 137
Query: 177 EDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRK 217
E+GA+DF++KPVKL+DVKR++ +LT+DV L N NKRK
Sbjct: 138 EEGAQDFLLKPVKLADVKRLRSHLTKDVKLSNG----NKRK 174
>gi|297837533|ref|XP_002886648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332489|gb|EFH62907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 159/269 (59%), Gaps = 67/269 (24%)
Query: 1 MTTTNGVASLR---LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVT 57
M G + LR +I I + P D+++VHVLAVDDS +DR VIERLL I+SCKVT
Sbjct: 1 MAKDGGFSCLRRSEMIGIGIGELESPPLDSDQVHVLAVDDSLLDRIVIERLLRITSCKVT 60
Query: 58 AVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYS 117
AVDSG RAL+FLGLD++++ FD LKVDLIITDYCMPGMTGYELLKKIK +T F
Sbjct: 61 AVDSGWRALEFLGLDDKKAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSF----- 115
Query: 118 TIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLE 177
+E+PVVIMSSEN++ RIDRCLE
Sbjct: 116 --------------------------------------KEVPVVIMSSENVITRIDRCLE 137
Query: 178 DGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKAR-------------ESCD- 223
+GAEDF++KPVKL+DVKR+++YLT+DV + +G NKRK ES D
Sbjct: 138 EGAEDFLLKPVKLADVKRLRNYLTKDVKVAADG---NKRKLTTPPPPPLSSTSSMESLDS 194
Query: 224 -LSSSPPSVITSSS---SPSSPSSPFRSP 248
+ SS V+ S SP S +SP SP
Sbjct: 195 TVESSLSLVVDDDSLIMSPESSTSPVNSP 223
>gi|388507854|gb|AFK41993.1| unknown [Lotus japonicus]
Length = 209
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/242 (53%), Positives = 151/242 (62%), Gaps = 52/242 (21%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDGLK 84
D++E+HVLAVDDS VDRKVIERLL ISSCKVT VDSG RALQ+LGLD EE S GFDG+K
Sbjct: 16 DSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVK 75
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
V+LI+TDY MPGMTGYELLKKIK
Sbjct: 76 VNLIMTDYSMPGMTGYELLKKIK------------------------------------- 98
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDV 204
+SSA REIPVV+MSSENIL RIDRCLE+GAEDF++KPVKLSDV+R++D++
Sbjct: 99 ------ESSAFREIPVVVMSSENILTRIDRCLEEGAEDFLLKPVKLSDVRRLRDFIMSGE 152
Query: 205 NLGNEGRGINKRKARESCDLSSSPPSV---ITSSSSPSSPSSPFRSPSILSSSAPCSPPS 261
E R +KR + C SS PS+ + S+P PSSP SP LS S CS S
Sbjct: 153 VKKGEKRS-HKRNRSDDC--SSCRPSLSNTFSPMSNPCDPSSPLVSP--LSPSTLCSKKS 207
Query: 262 TL 263
L
Sbjct: 208 RL 209
>gi|255540813|ref|XP_002511471.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223550586|gb|EEF52073.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 221
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 138/217 (63%), Gaps = 46/217 (21%)
Query: 1 MTTTNGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVD 60
M T G R + E+ +S + +EE+HVLAVDDS VDRKVIERLL ISSCKVTAVD
Sbjct: 1 MATAAGEVFRRSLPHEVG---VSSNGSEELHVLAVDDSLVDRKVIERLLKISSCKVTAVD 57
Query: 61 SGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTII 120
SG RALQ+LGLD E+S GF+ LKV+LI+TDY MPGMTGYELLKKIK
Sbjct: 58 SGTRALQYLGLDGEKSSVGFNDLKVNLIMTDYSMPGMTGYELLKKIK------------- 104
Query: 121 VFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGA 180
+SSA REIPVVIMSSENIL RIDRCLE+GA
Sbjct: 105 ------------------------------ESSAFREIPVVIMSSENILTRIDRCLEEGA 134
Query: 181 EDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRK 217
E+FIVKPVKLSDVKR+K+++ R E R I KRK
Sbjct: 135 EEFIVKPVKLSDVKRLKNFVMRGEGDEKEKRSILKRK 171
>gi|118489969|gb|ABK96781.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 248
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 144/290 (49%), Positives = 176/290 (60%), Gaps = 67/290 (23%)
Query: 4 TNGVASLRLISDEIDGFDLSPS-----DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTA 58
+N + S R +S++++ DLSP+ + EEVHVLAVDDSFVDRKVIERLL ISSCKVTA
Sbjct: 3 SNSIVSNRWMSEKMNCLDLSPNSKSDNEEEEVHVLAVDDSFVDRKVIERLLKISSCKVTA 62
Query: 59 VDSGRRALQFLGLDEEQSIN-------------GFDGLKVDLIITDYCMPGMTGYELLKK 105
VDSG AL+ LGL ++ + GF+GLKVDLIITDYCMPGMTGYELLKK
Sbjct: 63 VDSGWGALKLLGLLDDDEEDKSSSSSSSSSSSAGFEGLKVDLIITDYCMPGMTGYELLKK 122
Query: 106 IKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSS 165
IK +SS+ REIPVVIMSS
Sbjct: 123 IK-------------------------------------------ESSSFREIPVVIMSS 139
Query: 166 ENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL--TRDVNLGNEGRGINKRKARESCD 223
EN++ARIDRCLE+GAE+FI KPVKLSDVKR++DY TR++ +NKRK +ES D
Sbjct: 140 ENVMARIDRCLEEGAEEFIAKPVKLSDVKRLRDYYMATREIRSVQSSSNVNKRKLQESFD 199
Query: 224 LSSSPPSVITSSSSPSSPSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMT 273
+S+S S S S + SP L SS+ PS+LDSPT R+KMT
Sbjct: 200 VSTSSSPPSISPSPSPSSA----SPPSLFSSSAPCSPSSLDSPTRRIKMT 245
>gi|357486271|ref|XP_003613423.1| Two-component response regulator ARR3 [Medicago truncatula]
gi|355514758|gb|AES96381.1| Two-component response regulator ARR3 [Medicago truncatula]
Length = 237
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/273 (52%), Positives = 166/273 (60%), Gaps = 75/273 (27%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD---- 81
D++EVHVLAVDDS VDRKVIERLL IS+CKVTAVDSG RALQFLGL +E+ + D
Sbjct: 12 DSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKETSESDAFVP 71
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
GLKVDL+ITDYCMPGMTGYELLKKIK
Sbjct: 72 GLKVDLVITDYCMPGMTGYELLKKIK---------------------------------- 97
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL- 200
+S+ R IPVVIMSSENIL RIDRCLE+GAEDFIVKPVKLSDVKR+K Y+
Sbjct: 98 ---------ESTTFRAIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMT 148
Query: 201 TRDVNLG---------------NEGRGI-----NKRKARESCDLSSSPPSVITSSSSPSS 240
T++VN+G N+G G+ NKRK E+ DLSSS PS+ +S+ S S
Sbjct: 149 TKEVNVGSQDTEVIVTNNVGNDNDGDGVGIGINNKRKLEEASDLSSSEPSISSSTLSSPS 208
Query: 241 PSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMT 273
S SS+P S P LDSP RLKMT
Sbjct: 209 SSPS-------PSSSPLSSPDVLDSPIRRLKMT 234
>gi|297733851|emb|CBI15098.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 141/222 (63%), Gaps = 47/222 (21%)
Query: 10 LRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL 69
LR + E G + E+HVLAVDDS VDRKVIERLL ISSCKVTAV+SG RALQFL
Sbjct: 83 LRHVLPEKVGVSDHSAAGSELHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFL 142
Query: 70 GLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
GLD E++ GFDGLKV+LI+TDY MPGMTGYELLKKIK
Sbjct: 143 GLDGEENSVGFDGLKVNLIMTDYSMPGMTGYELLKKIK---------------------- 180
Query: 130 LFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
+S A R+IPVVIMSSENIL RIDRCLE+GAE+FIVKPVK
Sbjct: 181 ---------------------ESKAFRKIPVVIMSSENILTRIDRCLEEGAEEFIVKPVK 219
Query: 190 LSDVKRIKDYLTR--DVNLGNEGRGINKRKARESCDLSSSPP 229
L+DV+R++D++ R + N +G +KRK ++ D S SPP
Sbjct: 220 LADVRRLRDFIMRGEEEGEENRKKGNHKRKLQD--DYSISPP 259
>gi|309951228|emb|CBX43984.1| putative A-type response regulator 2 [Populus x canadensis]
Length = 251
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/293 (49%), Positives = 175/293 (59%), Gaps = 70/293 (23%)
Query: 4 TNGVASLRLISDEIDGFDLSPS-----DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTA 58
+N + S R +S++++ DLSP+ + EEVHVLAVDDSFVDRKVIERLL ISSCKVTA
Sbjct: 3 SNSIVSNRWMSEKMNCLDLSPNSNSDNEEEEVHVLAVDDSFVDRKVIERLLKISSCKVTA 62
Query: 59 VDSGRRALQFLGLDEEQSIN----------------GFDGLKVDLIITDYCMPGMTGYEL 102
VDSG AL+ LGL ++ + GF+GLKVDLIITDYCMPGMTGYEL
Sbjct: 63 VDSGWGALKLLGLLDDDEEDKSSSSSSSSSSFSSSAGFEGLKVDLIITDYCMPGMTGYEL 122
Query: 103 LKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVI 162
LKKIK +SS+ REIPVVI
Sbjct: 123 LKKIK-------------------------------------------ESSSFREIPVVI 139
Query: 163 MSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL--TRDVNLGNEGRGINKRKARE 220
MSSEN++ARIDRCLE+GAE+FI KPVKLSDVKR++DY TR++ +NKRK +E
Sbjct: 140 MSSENVMARIDRCLEEGAEEFIAKPVKLSDVKRLRDYYMATREIRSVQSSSNVNKRKLQE 199
Query: 221 SCDLSSSPPSVITSSSSPSSPSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMT 273
S D S+S S S S + SP L SS+ PS+LDSPT R+KMT
Sbjct: 200 SFDASTSSSPPSISPSPSPSSA----SPPSLFSSSAPCSPSSLDSPTRRIKMT 248
>gi|33330864|gb|AAQ10675.1| type-A response regulator [Catharanthus roseus]
Length = 254
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 122/180 (67%), Gaps = 43/180 (23%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
S +E+HVLAVDDS VDRKVIERLL IS CKVTAV+SGRRALQ+LGLD E+S GFDG
Sbjct: 7 SSGSAKELHVLAVDDSLVDRKVIERLLKISCCKVTAVESGRRALQYLGLDGEKSTVGFDG 66
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
LKV+LI+TDY MPGMTGYELLKKIK
Sbjct: 67 LKVNLILTDYSMPGMTGYELLKKIK----------------------------------- 91
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
SS L+EIPVVIMSSENIL RIDRCLE+GAE+F+VKPVKLSDVKRIKD++ +
Sbjct: 92 --------GSSTLKEIPVVIMSSENILTRIDRCLEEGAEEFLVKPVKLSDVKRIKDFVLK 143
>gi|225457164|ref|XP_002283787.1| PREDICTED: two-component response regulator ARR5-like [Vitis
vinifera]
Length = 222
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 141/222 (63%), Gaps = 47/222 (21%)
Query: 10 LRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL 69
LR + E G + E+HVLAVDDS VDRKVIERLL ISSCKVTAV+SG RALQFL
Sbjct: 9 LRHVLPEKVGVSDHSAAGSELHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFL 68
Query: 70 GLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
GLD E++ GFDGLKV+LI+TDY MPGMTGYELLKKIK
Sbjct: 69 GLDGEENSVGFDGLKVNLIMTDYSMPGMTGYELLKKIK---------------------- 106
Query: 130 LFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
+S A R+IPVVIMSSENIL RIDRCLE+GAE+FIVKPVK
Sbjct: 107 ---------------------ESKAFRKIPVVIMSSENILTRIDRCLEEGAEEFIVKPVK 145
Query: 190 LSDVKRIKDYLTR--DVNLGNEGRGINKRKARESCDLSSSPP 229
L+DV+R++D++ R + N +G +KRK ++ D S SPP
Sbjct: 146 LADVRRLRDFIMRGEEEGEENRKKGNHKRKLQD--DYSISPP 185
>gi|356497802|ref|XP_003517746.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 244
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 123/184 (66%), Gaps = 47/184 (25%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
+SP D+ EVHVLAVDDS VDRKVIERLL IS+CKVTAVDSG RALQFLGLDE++ + D
Sbjct: 12 VSPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESD 71
Query: 82 G----LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
G LKVDLIITDYCMP MTGYELLKKIK +T F
Sbjct: 72 GFVPDLKVDLIITDYCMPEMTGYELLKKIKESTMF------------------------- 106
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
REIPVVIMSSENIL RIDRCLE+GAEDFIVKPVKLSDVKR+K
Sbjct: 107 ------------------REIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLK 148
Query: 198 DYLT 201
YLT
Sbjct: 149 GYLT 152
>gi|370988685|dbj|BAL43556.1| type-A response regulator [Petunia x hybrida]
Length = 258
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 130/201 (64%), Gaps = 46/201 (22%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
+ SP D EVHVLAVDDS VDR VIERLL I+SCKVT VDSG RALQFLGLDEE+S
Sbjct: 18 EFSPVD--EVHVLAVDDSLVDRIVIERLLKITSCKVTTVDSGMRALQFLGLDEEESSVRI 75
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
DGLKVDLIITDYCMPGMTGY+LLKKIK
Sbjct: 76 DGLKVDLIITDYCMPGMTGYDLLKKIK--------------------------------- 102
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
S+ REIPVVIMSSEN+L RIDRCLE+GAEDF++KPVKL+DVKR+K ++
Sbjct: 103 -----------GSSFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLADVKRLKSFM 151
Query: 201 TRDVNLGNEGRGINKRKARES 221
+ E +G+NKRK E+
Sbjct: 152 FSEDRAKTEEKGMNKRKLPET 172
>gi|356501005|ref|XP_003519320.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 240
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 125/187 (66%), Gaps = 48/187 (25%)
Query: 20 FD-LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
FD +SP D+ EVHVLAVDDS VDRKVIERLL IS+CKVTAVDSG RALQFLGLDE++ +
Sbjct: 9 FDHVSPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTS 68
Query: 79 GFDG----LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILS 134
DG LKVDLIITDYCMP MTGYELLKKIK +T F
Sbjct: 69 ESDGFVPDLKVDLIITDYCMPEMTGYELLKKIKESTMF---------------------- 106
Query: 135 ICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
REIPVVIMSSENIL RIDRCLE+GAEDFIVKPVKLSDVK
Sbjct: 107 ---------------------REIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVK 145
Query: 195 RIKDYLT 201
R+K Y+T
Sbjct: 146 RLKGYMT 152
>gi|351724253|ref|NP_001238075.1| uncharacterized protein LOC100527828 [Glycine max]
gi|255633320|gb|ACU17017.1| unknown [Glycine max]
Length = 222
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/281 (51%), Positives = 166/281 (59%), Gaps = 69/281 (24%)
Query: 4 TNGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGR 63
+N V S + + I+GF L + +EEVHVLAVDDS VDRKVIE LL + +CKVTAVDSG
Sbjct: 3 SNSVVSWPRMPENINGFGLKQNQSEEVHVLAVDDSTVDRKVIEHLLKVLACKVTAVDSGL 62
Query: 64 RALQFLGLDEEQSI----NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
RALQ LGL +EQ I NGF GLKVDLIITDYCMPGMTGYELLK+IK
Sbjct: 63 RALQLLGLLDEQKIPSETNGFVGLKVDLIITDYCMPGMTGYELLKRIK------------ 110
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
+SS +E PVVIMSSEN+L RIDRCLE+G
Sbjct: 111 -------------------------------ESSTFKETPVVIMSSENVLPRIDRCLEEG 139
Query: 180 AEDFIVKPVKLSDVKRIKDYLTRDVNLG----NEGRGINKRKARESCDLSSSPPSVITSS 235
AEDFIVKPVKLSDVKR+KDY+T G E GINKRK ++ D+S S P I+SS
Sbjct: 140 AEDFIVKPVKLSDVKRLKDYMTTKEVRGELSQEEREGINKRKLLDTSDVSPSSPPSISSS 199
Query: 236 SSPSSPSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMTISD 276
PSS S S +DSP RLKMT +D
Sbjct: 200 PLPSSLS------------------SVIDSPIRRLKMTNTD 222
>gi|351725357|ref|NP_001235042.1| uncharacterized protein LOC100305926 [Glycine max]
gi|255627003|gb|ACU13846.1| unknown [Glycine max]
Length = 223
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 145/282 (51%), Positives = 169/282 (59%), Gaps = 70/282 (24%)
Query: 4 TNGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGR 63
+N V S + + IDGF + +EEVHVLAVDDS VDRKVIE L + +CKVTAVDSG
Sbjct: 3 SNSVVSWPRLPENIDGFGIKQKQSEEVHVLAVDDSIVDRKVIEHSLKVLACKVTAVDSGL 62
Query: 64 RALQFLGLDEEQSI----NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
RALQ LGL +EQ I NGF GLKVDLIITDYCMPGMTGYELLKKIK
Sbjct: 63 RALQLLGLLDEQKIPSETNGFGGLKVDLIITDYCMPGMTGYELLKKIK------------ 110
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
+SS+ +E PVVIMSSEN+L RIDRCLE+G
Sbjct: 111 -------------------------------ESSSFKETPVVIMSSENVLPRIDRCLEEG 139
Query: 180 AEDFIVKPVKLSDVKRIKDYL-TRDVNLG----NEGRGINKRKARESCDLSSSPPSVITS 234
AEDFIVKPVKLSDVKR+KD++ T++V G E GINKRK ++ D+S S P I+S
Sbjct: 140 AEDFIVKPVKLSDVKRLKDFMTTKEVIRGELSQEEREGINKRKLLDTSDVSPSSPPSISS 199
Query: 235 SSSPSSPSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMTISD 276
S PSSPS S +DSP RLKMT +D
Sbjct: 200 SPLPSSPS------------------SVIDSPIRRLKMTGTD 223
>gi|357477303|ref|XP_003608937.1| Two-component response regulator ARR5 [Medicago truncatula]
gi|355509992|gb|AES91134.1| Two-component response regulator ARR5 [Medicago truncatula]
Length = 214
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 141/241 (58%), Gaps = 61/241 (25%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
SPS E+HVLAVDDS VDRKVIERLL ISSCKVT V+S RRALQFLGLD E S FD
Sbjct: 19 SPSGAGELHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGENSDVAFDA 78
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
+KV+LI+TDY MPGMTGYELLKKIK
Sbjct: 79 VKVNLIMTDYSMPGMTGYELLKKIK----------------------------------- 103
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS REIPVVIMSSEN+L RIDRCLE+GAEDF++KPVKLSDV+R+KD++ R
Sbjct: 104 --------ESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMR 155
Query: 203 DVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSSPFRSPSILSSSAPCSPPST 262
+G + ++ R S D S P S S+ SP R C PPS+
Sbjct: 156 --GEVKDGEKCSLKRMRSSDDCSPCP--------SLSTTFSPMRH--------SCDPPSS 197
Query: 263 L 263
+
Sbjct: 198 V 198
>gi|388492124|gb|AFK34128.1| unknown [Lotus japonicus]
gi|388498306|gb|AFK37219.1| unknown [Lotus japonicus]
Length = 207
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 140/237 (59%), Gaps = 69/237 (29%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D E+HVLAVDDS VDRKVIERLL ISSCKVT VDSG RALQ+LGLD E+S G D +KV
Sbjct: 16 DAGELHVLAVDDSHVDRKVIERLLRISSCKVTVVDSGTRALQYLGLDGEKSSIGLDSVKV 75
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LI+TDY MPGMTGYELLKKIK
Sbjct: 76 NLIMTDYSMPGMTGYELLKKIK-------------------------------------- 97
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVN 205
Q+SS REIPVV+MSSENIL RID CLE+GAEDF++KPVKLSDVKR+ D++ R
Sbjct: 98 ----QESSVFREIPVVVMSSENILTRIDSCLEEGAEDFLLKPVKLSDVKRLTDFIMR--- 150
Query: 206 LGNEGRGINKRKAR-------------------ESCDLSSSPPSVITSSSSPSSPSS 243
G E + + +R + CDLSSSP + S+ SPS+ SS
Sbjct: 151 -GGE-KKVEQRCQKRSRSDDCSSSLSTAFSLVSHPCDLSSSP---VLSTLSPSAMSS 202
>gi|351721065|ref|NP_001237197.1| uncharacterized protein LOC100527518 [Glycine max]
gi|255632528|gb|ACU16614.1| unknown [Glycine max]
Length = 211
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 136/216 (62%), Gaps = 49/216 (22%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
SPS E+ VLAVDDS VDRKVIERLL ISSCKVT V+SG RALQ+LGLD S GFD
Sbjct: 19 SPSGAPELQVLAVDDSLVDRKVIERLLRISSCKVTVVESGTRALQYLGLDGGNSSLGFDS 78
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
+KV+LI+TDY MPGMTGYELLKKIK
Sbjct: 79 VKVNLIMTDYSMPGMTGYELLKKIK----------------------------------- 103
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
Q+SS REIPVVIMSSEN+L RIDRCLE+GAEDF++KPVKLSDV+R+KD++ +
Sbjct: 104 -------QESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMK 156
Query: 203 DVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSP 238
EG I+ ++ R + SPP +T++ SP
Sbjct: 157 --GKVKEGEKISNKRMR---SIDCSPP--LTATCSP 185
>gi|356562779|ref|XP_003549646.1| PREDICTED: two-component response regulator ARR5-like isoform 1
[Glycine max]
Length = 206
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/213 (52%), Positives = 132/213 (61%), Gaps = 48/213 (22%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
SPS E+HVLAVDDS VDRKVIERLL ISSCKVT V+SG RALQ+LGL+ E GFD
Sbjct: 19 SPSGAPELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGFDS 78
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
+KV+LI+TDY MPGMTGYELLKKIK
Sbjct: 79 VKVNLIMTDYSMPGMTGYELLKKIK----------------------------------- 103
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS REIPVVIMSSEN+L RIDRCLE+GAEDF++KPVKLSDV+R+KD++ +
Sbjct: 104 --------ESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMK 155
Query: 203 DVNLGNEGRGINKRKARESCDLSSSPPSVITSS 235
EG I+ ++ R + SPP T S
Sbjct: 156 --GKVKEGEKISHKRMR---SIDCSPPLTATCS 183
>gi|351725781|ref|NP_001238384.1| uncharacterized protein LOC100306152 [Glycine max]
gi|255627697|gb|ACU14193.1| unknown [Glycine max]
Length = 201
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 140/223 (62%), Gaps = 47/223 (21%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
++HVLAVDDS VDRKVIERLL ISSCKVT V+SG RALQ+LGLD E+S G D +KV+LI
Sbjct: 20 KLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGLDSVKVNLI 79
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TDY MPGMTGYELLKKIK
Sbjct: 80 MTDYSMPGMTGYELLKKIK----------------------------------------- 98
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGN 208
+SS RE+PVV+MSSENIL RID CLE+GAE+F++KPVKLSDVKR+ D++ R G
Sbjct: 99 --ESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMR--GEGM 154
Query: 209 EGRGINKRKARESCDLSSSPPSVITSSSSPSSPSSPFRSPSIL 251
+G I+K+++R S D S + +S S P SSP SP +L
Sbjct: 155 KGVKISKKRSR-SDDCIPSLSTAFSSVSHPCDISSP-PSPCVL 195
>gi|148608693|gb|ABQ95670.1| type A response regulator, partial [Malus x domestica]
Length = 194
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 115/170 (67%), Gaps = 43/170 (25%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HV AVDDS VDRKVIERLL ISSCKVTAVDSG RAL++LGLD E+S GFD +KV+LIIT
Sbjct: 1 HVFAVDDSHVDRKVIERLLKISSCKVTAVDSGTRALEYLGLDGEKSSVGFDNMKVNLIIT 60
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MPGMTGYELLKKIK
Sbjct: 61 DYSMPGMTGYELLKKIK------------------------------------------- 77
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+SSA RE+PVVIMSSENIL RIDRCLE+GAE++IVKPVKLSDV R+K+++
Sbjct: 78 ESSAFREVPVVIMSSENILTRIDRCLEEGAEEYIVKPVKLSDVNRLKNFM 127
>gi|356516718|ref|XP_003527040.1| PREDICTED: two-component response regulator ARR6-like [Glycine max]
Length = 204
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 132/213 (61%), Gaps = 49/213 (23%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
++HVLAVDDS VDRKVIERLL ISSCKVT V+SG RALQ+LGLD E+S GFD + V+LI
Sbjct: 20 KLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVDVNLI 79
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TDY MPGMTGYELLKKIK
Sbjct: 80 MTDYSMPGMTGYELLKKIK----------------------------------------- 98
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGN 208
+SS RE+PVV+MSSENIL RID CLE+GAE+F++KPVKLSDVKR+ D++ R G
Sbjct: 99 --ESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMR----GE 152
Query: 209 EGRGINKRKARESCDLSSSPPSVITSSSSPSSP 241
+G+ + K R D PS+ T+ +S S P
Sbjct: 153 GMKGVKRSKKRSRSD--DCIPSLSTAFASVSHP 183
>gi|356562781|ref|XP_003549647.1| PREDICTED: two-component response regulator ARR5-like isoform 2
[Glycine max]
Length = 213
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 132/220 (60%), Gaps = 55/220 (25%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING--F 80
SPS E+HVLAVDDS VDRKVIERLL ISSCKVT V+SG RALQ+LGL+ E G F
Sbjct: 19 SPSGAPELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGCLF 78
Query: 81 DGL-----KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSI 135
D L KV+LI+TDY MPGMTGYELLKKIK
Sbjct: 79 DWLWLQSVKVNLIMTDYSMPGMTGYELLKKIK---------------------------- 110
Query: 136 CFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
+SS REIPVVIMSSEN+L RIDRCLE+GAEDF++KPVKLSDV+R
Sbjct: 111 ---------------ESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRR 155
Query: 196 IKDYLTRDVNLGNEGRGINKRKARESCDLSSSPPSVITSS 235
+KD++ + EG I+ ++ R + SPP T S
Sbjct: 156 LKDFIMK--GKVKEGEKISHKRMR---SIDCSPPLTATCS 190
>gi|297819426|ref|XP_002877596.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
gi|297323434|gb|EFH53855.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
Length = 183
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 117/180 (65%), Gaps = 43/180 (23%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
S S E +HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E S GF+
Sbjct: 18 SLSSPELLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENSSVGFED 77
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
LK++LI+TDY MPGMTGYELLKKIK
Sbjct: 78 LKINLIMTDYSMPGMTGYELLKKIK----------------------------------- 102
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SSA REIPVVIMSSENIL RIDRCLE+GAEDF++KPVKL+DVKR++D L +
Sbjct: 103 --------ESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADVKRLRDSLMK 154
>gi|15242000|ref|NP_201097.1| two-component response regulator ARR6 [Arabidopsis thaliana]
gi|51316124|sp|Q9ZWS6.2|ARR6_ARATH RecName: Full=Two-component response regulator ARR6
gi|3953601|dbj|BAA34728.1| response regulator 6 [Arabidopsis thaliana]
gi|10177470|dbj|BAB10861.1| response regulator 6 [Arabidopsis thaliana]
gi|28466913|gb|AAO44065.1| At5g62920 [Arabidopsis thaliana]
gi|110735683|dbj|BAE99822.1| response regulator 6 [Arabidopsis thaliana]
gi|332010291|gb|AED97674.1| two-component response regulator ARR6 [Arabidopsis thaliana]
Length = 186
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 121/188 (64%), Gaps = 44/188 (23%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E+ GF+ LKV+LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TDY MPGMTGYELLKKIK
Sbjct: 85 TDYSMPGMTGYELLKKIK------------------------------------------ 102
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
+SSA RE+PVVIMSSENIL RIDRCLE+GAEDF++KPVKLSDVKR++D L + +L
Sbjct: 103 -ESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDVKRLRDSLMKVEDLSF- 160
Query: 210 GRGINKRK 217
+ I KR+
Sbjct: 161 TKSIQKRE 168
>gi|441415442|dbj|BAM74645.1| type-A response regulator [Torenia fournieri]
Length = 213
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 132/208 (63%), Gaps = 51/208 (24%)
Query: 21 DLSPSD-TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE----- 74
D S SD +E HVLAVDDS VDRKVIE+L ISSCKVTAV+SG RALQ+LGLD +
Sbjct: 5 DCSSSDLNQEFHVLAVDDSLVDRKVIEKLFKISSCKVTAVESGSRALQYLGLDGDLNDAN 64
Query: 75 QSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILS 134
S+ ++G+K++LI+TDY MPGMTG+ELL+KIK
Sbjct: 65 NSVGSYEGVKLNLIVTDYSMPGMTGFELLQKIK--------------------------- 97
Query: 135 ICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
S ALREIPVV+MSSEN+LARIDRCLE+GAE+F+VKPVKLSDVK
Sbjct: 98 ----------------GSKALREIPVVVMSSENVLARIDRCLEEGAEEFLVKPVKLSDVK 141
Query: 195 RIKDYLTRD--VNLGNEGRGINKRKARE 220
R++D++ + NE + KRK+++
Sbjct: 142 RLRDFVIKGKMKKTNNEKQRCYKRKSQQ 169
>gi|3323581|gb|AAC26635.1| two-component response regulator homolog [Arabidopsis thaliana]
Length = 184
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 125/201 (62%), Gaps = 50/201 (24%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDGLKVDLI 88
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E S GF+ LK++LI
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TDY MPGMTGYELLKKIK
Sbjct: 85 MTDYSMPGMTGYELLKKIK----------------------------------------- 103
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGN 208
+SSA REIPVVIMSSENIL RIDRCLE+GAEDF++KPVKL+DVKR++D L +
Sbjct: 104 --ESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADVKRLRDSLMK----AE 157
Query: 209 EG--RGINKRKARESCDLSSS 227
EG + I ++ E+ D+ S
Sbjct: 158 EGAFKNIMHKRELEANDIYSQ 178
>gi|297850294|ref|XP_002893028.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
gi|297338870|gb|EFH69287.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
Length = 209
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 140/228 (61%), Gaps = 49/228 (21%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
G DL+ + T E+HVLAVDDS VDRKVIERLL ISSCKVT V+SG RALQ+LGLD + +
Sbjct: 14 GGDLTVT-TPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGAS 72
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
LKV+LI+TDY MPG+TGY+LLKKIK
Sbjct: 73 NLKDLKVNLIVTDYSMPGLTGYDLLKKIK------------------------------- 101
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
+SSA RE+PVVIMSSENIL RI+ CL++GAE+F++KPVKL+DVKRIK
Sbjct: 102 ------------ESSAFREVPVVIMSSENILPRIEECLKEGAEEFLLKPVKLADVKRIKQ 149
Query: 199 YLTRDVNLGNEGRGI---NKRKARESCDLSSSPPSVITSSSSPSSPSS 243
+ + N E + + NKRK +E CD SSS S SS +PSS
Sbjct: 150 LILK--NEAEECKTLSHSNKRKLQEDCDTSSSSSSSHDDSSVKDTPSS 195
>gi|449440724|ref|XP_004138134.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
gi|449477360|ref|XP_004155001.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
Length = 227
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 119/186 (63%), Gaps = 44/186 (23%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDGL 83
S + ++HVLAVDDSFVDRKVIERLL SSC+VT V+SGR ALQ+LGLD E S+ L
Sbjct: 25 SGSTQLHVLAVDDSFVDRKVIERLLKSSSCEVTVVESGRSALQYLGLDGETNSVQFSSAL 84
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
KV+LIITDY MP MTGYELLKKIK
Sbjct: 85 KVNLIITDYSMPEMTGYELLKKIK------------------------------------ 108
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRD 203
+SSA REIPVVIMSSENI+ARID CL++GAE+FIVKPVKLSDVKR+KD++
Sbjct: 109 -------ESSAFREIPVVIMSSENIMARIDSCLKEGAEEFIVKPVKLSDVKRLKDFIMEG 161
Query: 204 VNLGNE 209
N G +
Sbjct: 162 ENGGKK 167
>gi|15228338|ref|NP_190393.1| two-component response regulator ARR5 [Arabidopsis thaliana]
gi|51316111|sp|Q9SB04.2|ARR5_ARATH RecName: Full=Two-component response regulator ARR5; AltName:
Full=Response reactor 2
gi|3273198|dbj|BAA31144.1| responce reactor2 [Arabidopsis thaliana]
gi|4678318|emb|CAB41129.1| responce reactor2 [Arabidopsis thaliana]
gi|18252911|gb|AAL62382.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|21389637|gb|AAM48017.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|110741132|dbj|BAE98659.1| response reactor 2 [Arabidopsis thaliana]
gi|332644847|gb|AEE78368.1| two-component response regulator ARR5 [Arabidopsis thaliana]
Length = 184
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 114/174 (65%), Gaps = 44/174 (25%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDGLKVDLI 88
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E S GF+ LK++LI
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TDY MPGMTGYELLKKIK
Sbjct: 85 MTDYSMPGMTGYELLKKIK----------------------------------------- 103
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SSA REIPVVIMSSENIL RIDRCLE+GAEDF++KPVKL+DVKR++D L +
Sbjct: 104 --ESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADVKRLRDSLMK 155
>gi|3953599|dbj|BAA34727.1| response regulator 5 [Arabidopsis thaliana]
Length = 184
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 114/174 (65%), Gaps = 44/174 (25%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDGLKVDLI 88
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E S GF+ LK++LI
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TDY MPGMTGYELLKKIK
Sbjct: 85 MTDYSMPGMTGYELLKKIK----------------------------------------- 103
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SSA REIPVVIMSSENIL RIDRCLE+GAEDF++KPVKL+DVKR++D L +
Sbjct: 104 --ESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADVKRLRDSLMK 155
>gi|312283391|dbj|BAJ34561.1| unnamed protein product [Thellungiella halophila]
Length = 190
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 121/188 (64%), Gaps = 44/188 (23%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD ++ G + LKV+LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVDEKTVGLEDLKVNLIM 84
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TDY MPGMTGYELLKKIK
Sbjct: 85 TDYSMPGMTGYELLKKIK------------------------------------------ 102
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
+SSA ++IPVV+MSSENIL RIDRCLE+GAEDF++KPVKLSDV+R++D L + NL +
Sbjct: 103 -ESSAFKDIPVVVMSSENILPRIDRCLEEGAEDFLLKPVKLSDVRRLRDSLIKVENLSS- 160
Query: 210 GRGINKRK 217
+ I KR+
Sbjct: 161 TKSIKKRE 168
>gi|297842233|ref|XP_002888998.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
gi|297334839|gb|EFH65257.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 119/188 (63%), Gaps = 46/188 (24%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+HVLAVDDSFVDRKVIERLL IS+CKVT V+SG RALQ+LGLD + +G LKV+LI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDHGSSGLKDLKVNLI 76
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TDY MPG+TGYELLKKIK
Sbjct: 77 VTDYSMPGLTGYELLKKIK----------------------------------------- 95
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGN 208
+SSA REIPVVIMSSENI RI++C+ +GAEDF++KPVKL+DVKR+K+ + R G
Sbjct: 96 --ESSAFREIPVVIMSSENIQPRIEQCMIEGAEDFLLKPVKLADVKRLKELIMRG---GE 150
Query: 209 EGRGINKR 216
G G K+
Sbjct: 151 AGEGKTKK 158
>gi|109631204|gb|ABG35778.1| SRR201 [Striga asiatica]
Length = 223
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 137/234 (58%), Gaps = 58/234 (24%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+E+ VLAVDDS VDRKVIERLL IS CK +V+SG RALQ+LGLDEE++ +GFD LKV+
Sbjct: 16 AQELCVLAVDDSLVDRKVIERLLKISRCKAISVESGTRALQYLGLDEEKNSSGFDDLKVN 75
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LI+TDY MPGMTG+ELL+KIK
Sbjct: 76 LIMTDYSMPGMTGFELLQKIK--------------------------------------- 96
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNL 206
S+ L+ IPVVI+SSENI+ RIDRCLE+GAE+++VKPVKLSDV+R++D + R
Sbjct: 97 ----GSAKLKGIPVVILSSENIMTRIDRCLEEGAEEYLVKPVKLSDVERVRDCILR---- 148
Query: 207 GNEGRGINKRKARESCDLSSSPPS-------VITSSSSP---SSPSSPFRSPSI 250
EG+ N + + PP+ V +SS P SP+SP P +
Sbjct: 149 -GEGKTGNSLNPKRKIGVEPPPPALDCETDPVGPTSSEPISHESPTSPCPGPEL 201
>gi|297797275|ref|XP_002866522.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
gi|297312357|gb|EFH42781.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
Length = 186
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 112/173 (64%), Gaps = 43/173 (24%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGL E+ GF LKV+LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLGVEEKSVGFQDLKVNLIM 84
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TDY MPGMTGYELLKKIK
Sbjct: 85 TDYSMPGMTGYELLKKIK------------------------------------------ 102
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SSA R++PVVIMSSENIL RIDRCLE+GAEDF++KPVKLSDV+R++D L +
Sbjct: 103 -ESSAFRQVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDVERLRDSLMK 154
>gi|15222035|ref|NP_177627.1| two-component response regulator ARR15 [Arabidopsis thaliana]
gi|51315904|sp|Q7G8V2.1|ARR15_ARATH RecName: Full=Two-component response regulator ARR15
gi|5882734|gb|AAD55287.1|AC008263_18 Similar to gb|AB008490 response regulator 7 (ARR7) from Arabidopsis
thaliana. EST gb|AA042183 comes from this gene
[Arabidopsis thaliana]
gi|11870065|gb|AAG40611.1|AF305720_1 response regulator 15 [Arabidopsis thaliana]
gi|12323888|gb|AAG51914.1|AC013258_8 putative response regulator (two component phosphotransfer
signaling); 70657-71777 [Arabidopsis thaliana]
gi|332197523|gb|AEE35644.1| two-component response regulator ARR15 [Arabidopsis thaliana]
Length = 206
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 115/174 (66%), Gaps = 43/174 (24%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+HVLAVDDSFVDRKVIERLL IS+CKVT V+SG RALQ+LGLD + +G LKV+LI
Sbjct: 17 ELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLI 76
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TDY MPG+TGYELLKKIK
Sbjct: 77 VTDYSMPGLTGYELLKKIK----------------------------------------- 95
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SSALREIPVVIMSSENI RI++C+ +GAE+F++KPVKL+DVKR+K+ + R
Sbjct: 96 --ESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLADVKRLKELIMR 147
>gi|15221927|ref|NP_173339.1| two-component response regulator ARR7 [Arabidopsis thaliana]
gi|51316125|sp|Q9ZWS7.1|ARR7_ARATH RecName: Full=Two-component response regulator ARR7
gi|8778291|gb|AAF79300.1|AC068602_23 F14D16.20 [Arabidopsis thaliana]
gi|3953603|dbj|BAA34729.1| response regulator 7 [Arabidopsis thaliana]
gi|88193788|gb|ABD42983.1| At1g19050 [Arabidopsis thaliana]
gi|332191674|gb|AEE29795.1| two-component response regulator ARR7 [Arabidopsis thaliana]
Length = 206
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 127/205 (61%), Gaps = 49/205 (23%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
G DL+ + T E+HVLAVDDS VDRKVIERLL ISSCKVT V+SG RALQ+LGLD + +
Sbjct: 14 GGDLTVT-TPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGAS 72
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
LKV+LI+TDY MPG++GY+LLKKIK
Sbjct: 73 NLKDLKVNLIVTDYSMPGLSGYDLLKKIK------------------------------- 101
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
+SSA RE+PVVIMSSENIL RI CL++GAE+F++KPVKL+DVKRIK
Sbjct: 102 ------------ESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLADVKRIKQ 149
Query: 199 YLTRDVNLGNEGRGI---NKRKARE 220
+ R N E + + NKRK +E
Sbjct: 150 LIMR--NEAEECKILSHSNKRKLQE 172
>gi|370988687|dbj|BAL43557.1| type-A response regulator [Petunia x hybrida]
Length = 227
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 112/183 (61%), Gaps = 52/183 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ---------SING 79
+ HVLAVDDS +DRK+IERLL SSC+VT VDSG +AL+FLGL E + S++
Sbjct: 9 QFHVLAVDDSLIDRKLIERLLKTSSCQVTTVDSGSKALEFLGLQEHEQNKSNQPCVSLDN 68
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+++LIITDYCMPGMTGY+LLKKIK
Sbjct: 69 HQEAEINLIITDYCMPGMTGYDLLKKIK-------------------------------- 96
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSDV +++ +
Sbjct: 97 -----------ESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDVNKLRPH 145
Query: 200 LTR 202
+ +
Sbjct: 146 MMK 148
>gi|224713626|gb|ACN62086.1| response regulator 1 [Pinus pinea]
Length = 184
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 131/218 (60%), Gaps = 53/218 (24%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
T E HVL VDDS +DRK+IE+LL ISS +VTAVD R+ALQFLGL++++ D ++V+
Sbjct: 12 TSEFHVLVVDDSVLDRKLIEKLLKISSYRVTAVDRVRKALQFLGLEDDEDDLNVDNIQVN 71
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+IITDYCMPGMTGY+LL+++K
Sbjct: 72 MIITDYCMPGMTGYDLLRRVK--------------------------------------- 92
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNL 206
+SSA+++IPVVIMSSEN+ +RI RC+ +GAE+F++KPV+LSDVK+++ ++ +N
Sbjct: 93 ----ESSAVKDIPVVIMSSENVESRISRCMSEGAEEFLLKPVQLSDVKKLRSHI---LNK 145
Query: 207 GNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSSP 244
G + ++S LS++ +T S SP + P
Sbjct: 146 GGS-------RDQQSTSLSNNKRKTMTDSLSPPAERRP 176
>gi|370988689|dbj|BAL43558.1| type-A response regulator [Petunia x hybrida]
Length = 158
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 113/178 (63%), Gaps = 46/178 (25%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL--DEEQSING 79
+ + +E HVLAVDD+ VDRK++ERLL SSCKVT ++G RAL++LGL D+E S NG
Sbjct: 15 MGETTADEPHVLAVDDNLVDRKLVERLLKKSSCKVTTAENGLRALEYLGLGGDQEHSTNG 74
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+G KV++IITDYCMPGMTGYELLKKIK
Sbjct: 75 -NGSKVNMIITDYCMPGMTGYELLKKIK-------------------------------- 101
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+SS L+++PVVIMSSENI RID+C+E+GA+ F++KP+K SDVKR++
Sbjct: 102 -----------ESSILKDVPVVIMSSENIPTRIDQCMEEGAQMFMLKPLKHSDVKRLR 148
>gi|408795928|gb|AFU91979.1| response regulator 1 protein [Pinus pinaster]
Length = 184
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 131/218 (60%), Gaps = 53/218 (24%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
T E HVLAVDDS +DRK+IE+LL ISS +VT VDS R+ALQFLGL++++ D ++V+
Sbjct: 12 TSEFHVLAVDDSVLDRKLIEKLLKISSYRVTTVDSVRKALQFLGLEDDEDDLNVDNIQVN 71
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+IITDYCMPGMTGY+LL+++K
Sbjct: 72 MIITDYCMPGMTGYDLLRRVK--------------------------------------- 92
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNL 206
+SSA+++IPVVIMSSEN+ +R RC+ +GA++F++KPV+LSDVK+++ ++
Sbjct: 93 ----ESSAVKDIPVVIMSSENVESRKSRCMSEGAQEFLLKPVQLSDVKKLRSHIL----- 143
Query: 207 GNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSSP 244
N+GR + ++S S++ +T S SP + P
Sbjct: 144 -NKGRS----RDQQSTSPSNNKRKTMTDSLSPPAERRP 176
>gi|225465893|ref|XP_002268352.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090344|emb|CBI40163.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 119/197 (60%), Gaps = 47/197 (23%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF-DGLKVDL 87
+ HVLAVDD+ +DRK+IE+LL SS +VTAVDSG +AL+FLGL EE+ N ++V+L
Sbjct: 8 QFHVLAVDDNLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHPQEMEVNL 67
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
IITDY MPGMTGY+LL+KIK
Sbjct: 68 IITDYSMPGMTGYDLLRKIK---------------------------------------- 87
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR---DV 204
+SS+L++IPVVIMSSENI +RI+RCLE+GAEDF +KPV+LSDV +++ +L R +
Sbjct: 88 ---ESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVSKLRPHLLRRKAEE 144
Query: 205 NLGNEGRGINKRKARES 221
R I KRK E
Sbjct: 145 EEEKPKRNIRKRKTIEE 161
>gi|224137712|ref|XP_002322625.1| type-a response regulator [Populus trichocarpa]
gi|222867255|gb|EEF04386.1| type-a response regulator [Populus trichocarpa]
Length = 227
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 111/183 (60%), Gaps = 52/183 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ---------SING 79
+ HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLGL E++ S N
Sbjct: 10 QFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNPDTPYVSPNN 69
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+LIITDYCMPGMTGY+LLKK+K
Sbjct: 70 HQEMEVNLIITDYCMPGMTGYDLLKKVK-------------------------------- 97
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR IPVVIMSSEN+ +RI RCLE+GAE+F +KPV+LSD+ R+K +
Sbjct: 98 -----------ESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRLSDLNRLKPH 146
Query: 200 LTR 202
+ +
Sbjct: 147 MMK 149
>gi|255583668|ref|XP_002532588.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223527676|gb|EEF29785.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 221
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 110/181 (60%), Gaps = 52/181 (28%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ---------SINGFD 81
HVLAVDDS +DRK+IE+LL ISS +VT VDSG +ALQFLGL E+ S N
Sbjct: 10 HVLAVDDSLIDRKLIEKLLKISSYQVTTVDSGSKALQFLGLHEDDRSSPEIPSVSPNSHQ 69
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
++V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 70 EVEVNLIITDYCMPGMTGYDLLKKIK---------------------------------- 95
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
+SS+L+ IPVVIMSSEN+ ARI RCLE+GAE+F +KPV+LSD+ R++ ++
Sbjct: 96 ---------ESSSLKNIPVVIMSSENVPARITRCLEEGAEEFFLKPVQLSDLNRLRPHMM 146
Query: 202 R 202
+
Sbjct: 147 K 147
>gi|309951238|emb|CBX43989.1| putative A-type response regulator 7 [Populus x canadensis]
Length = 227
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 111/183 (60%), Gaps = 52/183 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ---------SING 79
+ HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLGL E++ S N
Sbjct: 10 QFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNPDTPFVSPNN 69
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+LIITDYCMPGMTGY+LLKK+K
Sbjct: 70 HQEVEVNLIITDYCMPGMTGYDLLKKVK-------------------------------- 97
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR IPVVIMSSEN+ +RI RCLE+GAE+F +KPV+LSD+ R+K +
Sbjct: 98 -----------ESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRLSDLNRLKPH 146
Query: 200 LTR 202
+ +
Sbjct: 147 MMK 149
>gi|224086847|ref|XP_002307983.1| type-a response regulator [Populus trichocarpa]
gi|222853959|gb|EEE91506.1| type-a response regulator [Populus trichocarpa]
Length = 233
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 112/185 (60%), Gaps = 54/185 (29%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ-----------SI 77
+ HVLAVDDS +DRK+IERLL SS +VTAVDSG +AL+FLGL EE S
Sbjct: 10 QFHVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDHSNPDTVPSVSP 69
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
N ++V+LIITDYCMPGMTGY+LLKK+K
Sbjct: 70 NDHREVEVNLIITDYCMPGMTGYDLLKKVK------------------------------ 99
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+SS+LR+IPVVIMSSEN+ +RI RCLE+GAE+F +KPV+L+D+ R+K
Sbjct: 100 -------------ESSSLRDIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRLADLNRLK 146
Query: 198 DYLTR 202
++ +
Sbjct: 147 PHMMK 151
>gi|388497694|gb|AFK36913.1| unknown [Medicago truncatula]
Length = 239
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 109/183 (59%), Gaps = 52/183 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI---------NG 79
+ HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLGL E N
Sbjct: 8 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNN 67
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+L+ITDYCMPGMTGY+LLKKIK
Sbjct: 68 HQEVEVNLVITDYCMPGMTGYDLLKKIK-------------------------------- 95
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSD+ R+K +
Sbjct: 96 -----------ESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNRLKPH 144
Query: 200 LTR 202
+ +
Sbjct: 145 MKK 147
>gi|441415444|dbj|BAM74646.1| type-A response regulator [Torenia fournieri]
Length = 141
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 112/173 (64%), Gaps = 46/173 (26%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL---K 84
E+VHVLAVDD+ +DR ++E+LL SSCKVT V++GRRAL++LGL ++Q+I+ D K
Sbjct: 6 EQVHVLAVDDNLIDRTIVEKLLKNSSCKVTTVENGRRALEYLGLGDDQNISSDDNAAASK 65
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
V++IITDYCMPGMTGYELLKKIK
Sbjct: 66 VNMIITDYCMPGMTGYELLKKIK------------------------------------- 88
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+SS ++++PVVIMSSEN+ RI++CLE+GAE F++KP+K SD+K++K
Sbjct: 89 ------ESSVMKDVPVVIMSSENVPTRINKCLEEGAEMFMLKPLKHSDMKKLK 135
>gi|334184846|ref|NP_001189722.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|330254769|gb|AEC09863.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 165
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 111/184 (60%), Gaps = 45/184 (24%)
Query: 20 FDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSIN 78
L EE+HVLAVDD+ +DRK++ERLL IS CKVT ++ RAL++LGL D+ Q I+
Sbjct: 19 HHLHHGHDEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHID 78
Query: 79 GF--DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSIC 136
+ +KV LIITDYCMPGMTG+ELLKK+K
Sbjct: 79 ALTCNVMKVSLIITDYCMPGMTGFELLKKVK----------------------------- 109
Query: 137 FCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
Q+SS LRE+PVVIMSSENI RI++CL GA+ F+ KP+KL+DV+++
Sbjct: 110 -------------QESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLKLADVEKL 156
Query: 197 KDYL 200
K +L
Sbjct: 157 KCHL 160
>gi|388495492|gb|AFK35812.1| unknown [Lotus japonicus]
Length = 239
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 110/183 (60%), Gaps = 52/183 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ---------SING 79
+ HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLGL E + S N
Sbjct: 9 QYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTPSISPNN 68
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+L+ITDYCMPGMTGY+LLKKIK
Sbjct: 69 HQEVEVNLVITDYCMPGMTGYDLLKKIK-------------------------------- 96
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+ SD+ R+K +
Sbjct: 97 -----------ESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRQSDLVRLKSH 145
Query: 200 LTR 202
+ +
Sbjct: 146 IKK 148
>gi|225465891|ref|XP_002267932.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 146
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 110/173 (63%), Gaps = 44/173 (25%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF-DGLKVDL 87
+ HVLAVDDS +DRK+IE+LL SS +VTAVDSG +AL+FLGL EE+ N +V+L
Sbjct: 8 QFHVLAVDDSLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHPQETEVNL 67
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
IITDY MPGMTGY+LL+KIK
Sbjct: 68 IITDYSMPGMTGYDLLRKIK---------------------------------------- 87
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+SS+L++IPVVIMSSENI +RI+RCLE+GAEDF +KPV+LSDV +++ +L
Sbjct: 88 ---ESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVNKLRPHL 137
>gi|225441254|ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 218
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 109/180 (60%), Gaps = 49/180 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ------SINGFDG 82
+ HVLAVDDS +DRK+IE+LL SS +VT VDSG +AL+FLGL E S N
Sbjct: 8 QFHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVSPNSHQE 67
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
++V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 68 VEVNLIITDYCMPGMTGYDLLKKIK----------------------------------- 92
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS+LR IPVVIMSSEN+ +RI RCLE+GAE+F +KPV++SDV R+K ++ +
Sbjct: 93 --------ESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVQISDVNRLKPHMMK 144
>gi|297824003|ref|XP_002879884.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
gi|297325723|gb|EFH56143.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 111/176 (63%), Gaps = 46/176 (26%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSINGF--DGLK 84
EE+HVLAVDD+ +DRK++ERLL ISSCKVT ++ RAL++LGL D+ Q I+ + +K
Sbjct: 26 EELHVLAVDDNLIDRKLVERLLKISSCKVTTAENAIRALEYLGLGDQNQHIDALTCNVMK 85
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
V+LIITDYCMPGMTG+ELLKK+K
Sbjct: 86 VNLIITDYCMPGMTGFELLKKVK------------------------------------- 108
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+SS LRE+PVVIMSSENI RI++CL GA+ F+ KP+KLSDV+++K +L
Sbjct: 109 ------ESSNLRELPVVIMSSENIPTRINKCLASGAQMFMQKPLKLSDVEKLKCHL 158
>gi|109631202|gb|ABG35777.1| SRR217 [Striga asiatica]
Length = 220
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 112/182 (61%), Gaps = 51/182 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL--DEEQSINGFDG---- 82
+ HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLG DE + N FD
Sbjct: 9 QFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGNKALEFLGWSKDESGNSNAFDSPKNH 68
Query: 83 --LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
++V+L+ITDYCMPGMTGYELLKK+K
Sbjct: 69 QVVEVNLVITDYCMPGMTGYELLKKVK--------------------------------- 95
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+S+ LR+IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSDV +++ ++
Sbjct: 96 ----------ESTFLRDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDVNKLRPHM 145
Query: 201 TR 202
+
Sbjct: 146 MK 147
>gi|297739924|emb|CBI30106.3| unnamed protein product [Vitis vinifera]
Length = 157
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 108/178 (60%), Gaps = 49/178 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ------SINGFDG 82
+ HVLAVDDS +DRK+IE+LL SS +VT VDSG +AL+FLGL E S N
Sbjct: 8 QFHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVSPNSHQE 67
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
++V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 68 VEVNLIITDYCMPGMTGYDLLKKIK----------------------------------- 92
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+SS+LR IPVVIMSSEN+ +RI RCLE+GAE+F +KPV++SDV R+K ++
Sbjct: 93 --------ESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKPVQISDVNRLKPHM 142
>gi|224144996|ref|XP_002325489.1| type-a response regulator [Populus trichocarpa]
gi|222862364|gb|EEE99870.1| type-a response regulator [Populus trichocarpa]
Length = 154
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 109/172 (63%), Gaps = 44/172 (25%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL-KV 85
TEE HVLAVDDS VDRK++ERLL SSCKVT ++G RAL++LGL +E+ + D + KV
Sbjct: 18 TEEPHVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNVSKV 77
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LIITDYCMPGMTGYELLKKIK
Sbjct: 78 NLIITDYCMPGMTGYELLKKIK-------------------------------------- 99
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+SS L+EIPVVIMSSENI RI++CLE+GA+ F++KP+K SDV +++
Sbjct: 100 -----ESSMLKEIPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDVVKLR 146
>gi|326518312|dbj|BAJ88185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 128/222 (57%), Gaps = 52/222 (23%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDG------L 83
HVLAVDDS +DRK+IERLL SS +VT VDSG +ALQFLGL E+ SI+ +
Sbjct: 55 HVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDASISSVHADQLDVEV 114
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 115 NVNLIITDYCMPGMTGYDLLKKIK------------------------------------ 138
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL--T 201
+SS+ R+IPVVIMSSENI +RI+RCLE+GA +F +KPV+LSD+ ++K ++ +
Sbjct: 139 -------ESSSFRDIPVVIMSSENIPSRINRCLEEGANEFFLKPVRLSDMSKLKPHIMKS 191
Query: 202 RDVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSS 243
R +E + + + SSS ++ SSS+P+ SS
Sbjct: 192 RCKEHSHEDQDLLSNSDTNPTNNSSSRDTITISSSNPTDHSS 233
>gi|388512609|gb|AFK44366.1| unknown [Lotus japonicus]
Length = 239
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 109/183 (59%), Gaps = 52/183 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ---------SING 79
+ HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLGL E + S N
Sbjct: 9 QYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTPSISPNN 68
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+L+ITDYCMPGMTGY+LLKKIK
Sbjct: 69 HQEVEVNLVITDYCMPGMTGYDLLKKIK-------------------------------- 96
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR IPVV MSSEN+ +RI+RCLE+GAE+F +KPV+ SD+ R+K +
Sbjct: 97 -----------ESSSLRNIPVVTMSSENVPSRINRCLEEGAEEFFLKPVRQSDLVRLKSH 145
Query: 200 LTR 202
+ +
Sbjct: 146 IKK 148
>gi|309951236|emb|CBX43988.1| putative A-type response regulator 6 [Populus x canadensis]
Length = 230
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 115/194 (59%), Gaps = 55/194 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI----------- 77
+ HVLAVDDS +DRK+IERLL SS +VTAVDSG +AL+FLGL EE
Sbjct: 10 QFHVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDQSNPDTVPSVCP 69
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
N ++V+LIITDYCMPGMTGY+LLKK+K
Sbjct: 70 NDHREVEVNLIITDYCMPGMTGYDLLKKVK------------------------------ 99
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+SS+LR+IPVVIMSSEN+ +RI RCLE+GAE+F +KPV+L+D+ R+K
Sbjct: 100 -------------ESSSLRDIPVVIMSSENVPSRITRCLEEGAEEFFLKPVRLADLNRLK 146
Query: 198 DYLTRDVNLGNEGR 211
++ + + NE +
Sbjct: 147 PHMMK-TKIKNEKQ 159
>gi|225465885|ref|XP_002267404.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 220
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 112/181 (61%), Gaps = 50/181 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN-------GFD 81
+ HVLAVDDS +DRK+IE+LL SS +VTAVDSG +AL+FLGL E + N
Sbjct: 8 QFHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQRNLSPPSLCPSQ 67
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
++V+LIITDYCMPGMTGY+LL+KIK
Sbjct: 68 EMEVNLIITDYCMPGMTGYDLLRKIK---------------------------------- 93
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
+S++L++IPVVIMSSENI +RI+RCLE+GAEDF +KPV+LSDV +++ +L
Sbjct: 94 ---------ESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVNKLRPHLL 144
Query: 202 R 202
+
Sbjct: 145 K 145
>gi|297824073|ref|XP_002879919.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
gi|297325758|gb|EFH56178.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 112/188 (59%), Gaps = 52/188 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGF-------DG 82
HVLAVDDS DRK+IERLL SSC+VT VDSG +AL+FLGL ++ + N
Sbjct: 10 HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNNPNALSTSPQIHQE 69
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
++++LIITDYCMPGMTGY+LLKK+K
Sbjct: 70 VEINLIITDYCMPGMTGYDLLKKVK----------------------------------- 94
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+S+ALR IPVVIMSSEN+ ARI RCLE+GAE+F +KPVKL+D+ ++K ++ +
Sbjct: 95 --------ESAALRSIPVVIMSSENVPARISRCLEEGAEEFFLKPVKLADLTKLKPHMMK 146
Query: 203 DVNLGNEG 210
L NE
Sbjct: 147 -TKLKNES 153
>gi|15226732|ref|NP_181599.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|51316112|sp|Q9SHC2.1|ARR16_ARATH RecName: Full=Two-component response regulator ARR16
gi|11870068|gb|AAG40612.1|AF305721_1 response regulator 16 [Arabidopsis thaliana]
gi|10443140|emb|CAC10396.1| putative type A response regulator [Arabidopsis thaliana]
gi|194708806|gb|ACF88487.1| At2g40670 [Arabidopsis thaliana]
gi|330254768|gb|AEC09862.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 164
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 110/184 (59%), Gaps = 46/184 (25%)
Query: 20 FDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSIN 78
L EE+HVLAVDD+ +DRK++ERLL IS CKVT ++ RAL++LGL D+ Q I+
Sbjct: 19 HHLHHGHDEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHID 78
Query: 79 GF--DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSIC 136
+ +KV LIITDYCMPGMTG+ELLKK+K
Sbjct: 79 ALTCNVMKVSLIITDYCMPGMTGFELLKKVK----------------------------- 109
Query: 137 FCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS LRE+PVVIMSSENI RI++CL GA+ F+ KP+KL+DV+++
Sbjct: 110 --------------ESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLKLADVEKL 155
Query: 197 KDYL 200
K +L
Sbjct: 156 KCHL 159
>gi|296090338|emb|CBI40157.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 112/181 (61%), Gaps = 50/181 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN-------GFD 81
+ HVLAVDDS +DRK+IE+LL SS +VTAVDSG +AL+FLGL E + N
Sbjct: 8 QFHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQRNLSPPSLCPSQ 67
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
++V+LIITDYCMPGMTGY+LL+KIK
Sbjct: 68 EMEVNLIITDYCMPGMTGYDLLRKIK---------------------------------- 93
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
+S++L++IPVVIMSSENI +RI+RCLE+GAEDF +KPV+LSDV +++ +L
Sbjct: 94 ---------ESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVNKLRPHLL 144
Query: 202 R 202
+
Sbjct: 145 K 145
>gi|388506210|gb|AFK41171.1| unknown [Lotus japonicus]
Length = 174
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 118/200 (59%), Gaps = 46/200 (23%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P +T+ HVLAVDDS +DR +IERLL SS VTAVDS +AL FLGL E+ +
Sbjct: 5 TPKETQ-FHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSASKALNFLGLVEDMASEIHQD 63
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
+ V+LIITDYCMPGMTGY+LL+KIK
Sbjct: 64 VDVNLIITDYCMPGMTGYDLLRKIK----------------------------------- 88
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+S +L++IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSDV ++K +L +
Sbjct: 89 --------ESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVHKLKPHLMK 140
Query: 203 DVNLGNEGRG--INKRKARE 220
+ R NKRK +E
Sbjct: 141 SRVKEEQDRQPINNKRKIKE 160
>gi|15230202|ref|NP_191263.1| two-component response regulator ARR9 [Arabidopsis thaliana]
gi|51315815|sp|O80366.1|ARR9_ARATH RecName: Full=Two-component response regulator ARR9; AltName:
Full=Response reactor 4
gi|3273202|dbj|BAA31146.1| responce reactor4 [Arabidopsis thaliana]
gi|6911874|emb|CAB72174.1| responce reactor 4 [Arabidopsis thaliana]
gi|19699061|gb|AAL90898.1| AT3g57040/F24I3_120 [Arabidopsis thaliana]
gi|22137112|gb|AAM91401.1| At3g57040/F24I3_120 [Arabidopsis thaliana]
gi|332646081|gb|AEE79602.1| two-component response regulator ARR9 [Arabidopsis thaliana]
Length = 234
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 108/184 (58%), Gaps = 53/184 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN---------- 78
+ HVLAVDDS DRK+IERLL SSC+VT VDSG +AL+FLGL + N
Sbjct: 8 QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPV 67
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
++V+LIITDYCMPGMTGY+LLKK+K
Sbjct: 68 NHQVVEVNLIITDYCMPGMTGYDLLKKVK------------------------------- 96
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
+SSA R+IPVVIMSSEN+ ARI RCLE+GAE+F +KPV+L+D+ ++K
Sbjct: 97 ------------ESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPVRLADLNKLKP 144
Query: 199 YLTR 202
++ +
Sbjct: 145 HMMK 148
>gi|359807137|ref|NP_001241095.1| uncharacterized protein LOC100814494 [Glycine max]
gi|255647755|gb|ACU24338.1| unknown [Glycine max]
Length = 244
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 114/193 (59%), Gaps = 53/193 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI---------NG 79
+ HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLGL E N
Sbjct: 6 QFHVLAVDDSLIDRKLIERLLRTSSYEVTTVDSGSKALEFLGLCENDESNPSTPYVCPNN 65
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+L+ITDYCMPGMTGY+LLKKIK
Sbjct: 66 HQEVEVNLVITDYCMPGMTGYDLLKKIK-------------------------------- 93
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSD+ ++K +
Sbjct: 94 -----------ESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNKLKPH 142
Query: 200 LTRDVNLGNEGRG 212
+ + L ++ +G
Sbjct: 143 MKK-TKLKDQKQG 154
>gi|309951240|emb|CBX43990.1| putative A-type response regulator 8 [Populus x canadensis]
Length = 154
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 109/172 (63%), Gaps = 44/172 (25%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL-KV 85
TEE HVLAVDDS VDRK++ERLL SSCKVT ++G RAL++LGL +E+ + D + KV
Sbjct: 18 TEEPHVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNVSKV 77
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LIITDYCMPGMTGYELLKKIK
Sbjct: 78 NLIITDYCMPGMTGYELLKKIK-------------------------------------- 99
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+SS L++IPVVIMSSENI RI++CLE+GA+ F++KP+K SDV +++
Sbjct: 100 -----ESSMLKKIPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDVVKLR 146
>gi|242084508|ref|XP_002442679.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
gi|241943372|gb|EES16517.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
Length = 236
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 110/177 (62%), Gaps = 49/177 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS-----INGFDGLKV 85
HVLAVDDS DRK+IERLL SS +VT VDSG +ALQFLGL ++ S + D + V
Sbjct: 46 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDDHSPVPVHTDQLD-VAV 104
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LIITDYCMPGMTGY+LLKKIK
Sbjct: 105 NLIITDYCMPGMTGYDLLKKIK-------------------------------------- 126
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS+LR+IPVVIMSSENI +RI+RCLE+GA++F +KPV+LSD+ ++K ++ +
Sbjct: 127 -----ESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPHILK 178
>gi|18410485|ref|NP_567037.1| two-component response regulator ARR17 [Arabidopsis thaliana]
gi|51316089|sp|Q9FPR6.1|ARR17_ARATH RecName: Full=Two-component response regulator ARR17
gi|11870071|gb|AAG40613.1|AF305722_1 response regulator 17 [Arabidopsis thaliana]
gi|332645994|gb|AEE79515.1| two-component response regulator ARR17 [Arabidopsis thaliana]
Length = 153
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 44/174 (25%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG-LKVD 86
EE+HVLAVDD+ +DRK++ER+L ISSCKVT ++G RAL++LGL + Q + +KV+
Sbjct: 18 EELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVN 77
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LIITDYCMPGMTG+ELLKK+K
Sbjct: 78 LIITDYCMPGMTGFELLKKVK--------------------------------------- 98
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+SS L+E+PVVI+SSENI RI++CL GA+ F+ KP+KLSDV+++K +L
Sbjct: 99 ----ESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLSDVEKLKCHL 148
>gi|309951232|emb|CBX43986.1| putative A-type response regulator 4 [Populus x canadensis]
Length = 193
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 118/203 (58%), Gaps = 55/203 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL---DEEQSIN------- 78
+ HVLAVDDS +DRK+IERLL SS +VTAVDSG +AL+FLGL DE++ N
Sbjct: 12 QFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLHGDDEQRDSNPSSVSPD 71
Query: 79 -GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
+++++IITDYCMPGMTGY+LLKKIK
Sbjct: 72 HHHQHIEINMIITDYCMPGMTGYDLLKKIK------------------------------ 101
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+S ++IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSDV +++
Sbjct: 102 -------------ESKYFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVNKLR 148
Query: 198 DYLTRDVNLGNEGRGINKRKARE 220
+L + E + NKRK E
Sbjct: 149 PHLMKG-RCKEEDQPSNKRKGME 170
>gi|297816962|ref|XP_002876364.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322202|gb|EFH52623.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 149
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 108/173 (62%), Gaps = 46/173 (26%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
EE+HVLAVDD+ +DRK +ER+L ISSCKVT ++G RAL++LGL + Q N +KV+L
Sbjct: 18 EELHVLAVDDNLIDRKFLERILKISSCKVTTAENGLRALEYLGLGDPQQTN---VMKVNL 74
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
IITDYCMPGMTG+ELLKK+K
Sbjct: 75 IITDYCMPGMTGFELLKKVK---------------------------------------- 94
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+SS L+E+PVVI+SSENI RI++CL GA+ F+ KP+KLSDV+++K +L
Sbjct: 95 ---ESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLSDVEKLKCHL 144
>gi|224033189|gb|ACN35670.1| unknown [Zea mays]
gi|413915889|gb|AFW55821.1| response regulator 6 [Zea mays]
Length = 262
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 109/183 (59%), Gaps = 54/183 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS-----------ING 79
HVLAVDDS DRK+IERLL SS +VT VDSG +ALQFLGL ++ S +
Sbjct: 70 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 129
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 130 NQDVAVNLIITDYCMPGMTGYDLLKKIK-------------------------------- 157
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR+IPVVIMSSENI +RI+RCLE+GA++F +KPV+LSD+ ++K +
Sbjct: 158 -----------ESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPH 206
Query: 200 LTR 202
+ +
Sbjct: 207 ILK 209
>gi|224075846|ref|XP_002304794.1| type-a response regulator [Populus trichocarpa]
gi|224075848|ref|XP_002304795.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
gi|222842226|gb|EEE79773.1| type-a response regulator [Populus trichocarpa]
gi|222842227|gb|EEE79774.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
Length = 193
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 118/203 (58%), Gaps = 55/203 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL---DEEQSIN------- 78
+ HVLAVDDS +DRK+IERLL SS +VTAVDSG +AL+FLGL DE++ N
Sbjct: 12 QFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRDSNPSSVSPD 71
Query: 79 -GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
+++++IITDYCMPGMTGY+LLKKIK
Sbjct: 72 HHHQHIEINMIITDYCMPGMTGYDLLKKIK------------------------------ 101
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+S ++IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSDV +++
Sbjct: 102 -------------ESKYFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVNKLR 148
Query: 198 DYLTRDVNLGNEGRGINKRKARE 220
+L + E + NKRK E
Sbjct: 149 PHLMKG-RCKEEDQPNNKRKGME 170
>gi|297817018|ref|XP_002876392.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
gi|297322230|gb|EFH52651.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 108/184 (58%), Gaps = 53/184 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL----- 83
+ HVLAVDDS DRK IERLL SSC+VT VDSG +AL+FLGL + N + L
Sbjct: 6 QFHVLAVDDSLFDRKYIERLLQKSSCQVTTVDSGSKALEFLGLRQGIDSNDPNALSKSPV 65
Query: 84 -----KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
+V+LIITDYCMPGMTGY+LLKK+K
Sbjct: 66 THQVVEVNLIITDYCMPGMTGYDLLKKVK------------------------------- 94
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
+SSA R+IPVVIMSSEN+ ARI RCLE+GAE+F +KPV+L+D+ ++K
Sbjct: 95 ------------ESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPVRLADLNKLKP 142
Query: 199 YLTR 202
++ +
Sbjct: 143 HMMK 146
>gi|358248966|ref|NP_001240226.1| uncharacterized protein LOC100788079 [Glycine max]
gi|255641691|gb|ACU21117.1| unknown [Glycine max]
Length = 248
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 109/185 (58%), Gaps = 54/185 (29%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN---------- 78
+ HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLGL E N
Sbjct: 9 QFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDESNPSIPSVCPNN 68
Query: 79 -GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
++V+L+ITDYCMPGMTGY+LLKKIK
Sbjct: 69 HQPQEVEVNLVITDYCMPGMTGYDLLKKIK------------------------------ 98
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+SS+LR IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSD+ ++K
Sbjct: 99 -------------ESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNKLK 145
Query: 198 DYLTR 202
++ +
Sbjct: 146 PHMKK 150
>gi|162459272|ref|NP_001104857.1| LOC541632 [Zea mays]
gi|12060388|dbj|BAB20581.1| response regulator 6 [Zea mays]
Length = 235
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 109/183 (59%), Gaps = 54/183 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS-----------ING 79
HVLAVDDS DRK+IERLL SS +VT VDSG +ALQFLGL ++ S +
Sbjct: 43 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 102
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 103 NQDVAVNLIITDYCMPGMTGYDLLKKIK-------------------------------- 130
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR+IPVVIMSSENI +RI+RCLE+GA++F +KPV+LSD+ ++K +
Sbjct: 131 -----------ESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPH 179
Query: 200 LTR 202
+ +
Sbjct: 180 ILK 182
>gi|194694438|gb|ACF81303.1| unknown [Zea mays]
Length = 235
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 109/183 (59%), Gaps = 54/183 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS-----------ING 79
HVLAVDDS DRK+IERLL SS +VT VDSG +ALQFLGL ++ S +
Sbjct: 43 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 102
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 103 NQDVAVNLIITDYCMPGMTGYDLLKKIK-------------------------------- 130
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR+IPVVIMSSENI +RI+RCLE+GA++F +KPV+LSD+ ++K +
Sbjct: 131 -----------ESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPH 179
Query: 200 LTR 202
+ +
Sbjct: 180 ILK 182
>gi|195622036|gb|ACG32848.1| RR10 - Corn type-A response regulator [Zea mays]
Length = 204
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 109/183 (59%), Gaps = 54/183 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS-----------ING 79
HVLAVDDS DRK+IERLL SS +VT VDSG +ALQFLGL ++ S +
Sbjct: 11 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVAA 70
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 71 NQDVAVNLIITDYCMPGMTGYDLLKKIK-------------------------------- 98
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+LR+IPVVIMSSENI +RI+RCLE+GA++F +KPV+LSD+ ++K +
Sbjct: 99 -----------ESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMNKLKPH 147
Query: 200 LTR 202
+ +
Sbjct: 148 ILK 150
>gi|15227325|ref|NP_181663.1| two-component response regulator ARR8 [Arabidopsis thaliana]
gi|51315814|sp|O80365.1|ARR8_ARATH RecName: Full=Two-component response regulator ARR8; AltName:
Full=Response reactor 3
gi|3273200|dbj|BAA31145.1| responce reactor3 [Arabidopsis thaliana]
gi|3894192|gb|AAC78541.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|18491269|gb|AAL69459.1| At2g41310/F13H10.14 [Arabidopsis thaliana]
gi|110736644|dbj|BAF00286.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|330254865|gb|AEC09959.1| two-component response regulator ARR8 [Arabidopsis thaliana]
Length = 225
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 107/180 (59%), Gaps = 51/180 (28%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGF-------DG 82
HVLAVDDS DRK+IERLL SSC+VT VDSG +AL+FLGL ++ N
Sbjct: 10 HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
++++LIITDYCMPGMTGY+LLKK+K
Sbjct: 70 VEINLIITDYCMPGMTGYDLLKKVK----------------------------------- 94
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+S+A R IPVVIMSSEN+ ARI RCLE+GAE+F +KPVKL+D+ ++K ++ +
Sbjct: 95 --------ESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLKPVKLADLTKLKPHMMK 146
>gi|449445057|ref|XP_004140290.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527697|ref|XP_004170846.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 156
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 111/189 (58%), Gaps = 54/189 (28%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ-----------SING 79
HVLAVDDSF+DRK+IERLL SS VTAVDSG +AL+FLGL + +
Sbjct: 11 HVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAPDQNHH 70
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDY MPGM+GYELL+KIK
Sbjct: 71 HQEVDVNLIITDYSMPGMSGYELLRKIK-------------------------------- 98
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+S +L++IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSDV++++ +
Sbjct: 99 -----------ESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPH 147
Query: 200 LTRDVNLGN 208
L ++ + N
Sbjct: 148 LIKEKSTNN 156
>gi|147837871|emb|CAN60564.1| hypothetical protein VITISV_013996 [Vitis vinifera]
Length = 154
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 108/176 (61%), Gaps = 43/176 (24%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSINGFDGLKVD 86
+E HVLAVDD+ +DRK+IE+LL SC+VT ++G RAL++LGL D +Q+ + KV+
Sbjct: 19 DEPHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVSKVN 78
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LIITDYCMPGMTGYELLK+ K
Sbjct: 79 LIITDYCMPGMTGYELLKRXK--------------------------------------- 99
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
Q SS L+E+PVVIMSSENI RI++CLE+GA+ F++KP+K SDVK+++ YL
Sbjct: 100 ---QQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDVKKLRCYLKH 152
>gi|225448707|ref|XP_002280746.1| PREDICTED: two-component response regulator ARR17 [Vitis vinifera]
Length = 153
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 44/176 (25%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSINGFDGLKVD 86
+E HVLAVDD+ +DRK+IE+LL SC+VT ++G RAL++LGL D +Q+ + KV+
Sbjct: 19 DEPHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVSKVN 78
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LIITDYCMPGMTGYELLK++K
Sbjct: 79 LIITDYCMPGMTGYELLKRVK--------------------------------------- 99
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
SS L+E+PVVIMSSENI RI++CLE+GA+ F++KP+K SDVK+++ YL
Sbjct: 100 ----QSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDVKKLRCYLKH 151
>gi|226532164|ref|NP_001149868.1| RR4 - Corn type-A response regulator [Zea mays]
gi|195635163|gb|ACG37050.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 236
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 105/176 (59%), Gaps = 47/176 (26%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE----EQSINGFDGLKVD 86
HVLAVDDS VDRK+IE LL SS +VT VDSG +AL+ LGL + S + V+
Sbjct: 11 HVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVN 70
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LIITDYCMPGMTGY+LLK++K
Sbjct: 71 LIITDYCMPGMTGYDLLKRVK--------------------------------------- 91
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
SS+L++IPVVIMSSEN+ ARI RCL+DGAE+F +KPVKL+D+K++K +L +
Sbjct: 92 ----GSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKLADMKKLKSHLLK 143
>gi|255544001|ref|XP_002513063.1| Two-component response regulator ARR8, putative [Ricinus communis]
gi|223548074|gb|EEF49566.1| Two-component response regulator ARR8, putative [Ricinus communis]
Length = 197
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 117/211 (55%), Gaps = 64/211 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI----------- 77
+ HVLAVDDS +DRK+IERLL SS VTAVDSG +AL+FLGL+EE+
Sbjct: 8 QFHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDSS 67
Query: 78 --------NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
L+V+LIITDYCMPGMTGY+LL+KIK
Sbjct: 68 PISVCPDDEHHQDLQVNLIITDYCMPGMTGYDLLRKIK---------------------- 105
Query: 130 LFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
+S + ++IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+
Sbjct: 106 ---------------------ESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQ 144
Query: 190 LSDVKRIKDYLTRDVNLGNEGRGINKRKARE 220
LSDV ++K ++ + NE NKRK E
Sbjct: 145 LSDVNKLKPHMMKGKTRENEPN--NKRKGME 173
>gi|162459124|ref|NP_001104856.1| response regulator 5 [Zea mays]
gi|12060386|dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 105/176 (59%), Gaps = 47/176 (26%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE----EQSINGFDGLKVD 86
HVLAVDDS VDRK+IE LL SS +VT VDSG +AL+ LGL + S + V+
Sbjct: 11 HVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVN 70
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LIITDYCMPGMTGY+LLK++K
Sbjct: 71 LIITDYCMPGMTGYDLLKRVK--------------------------------------- 91
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
SS+L++IPVVIMSSEN+ ARI RCL+DGAE+F +KPVKL+D+K++K +L +
Sbjct: 92 ----GSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKLADMKKLKSHLLK 143
>gi|33330868|gb|AAQ10677.1| type-A response regulator [Catharanthus roseus]
Length = 188
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 108/170 (63%), Gaps = 47/170 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG-LDEEQSINGFDG---LKVD 86
HVLAVDDS VDRK+IERLL S+ +VT VDSG +AL+FLG LDEE+ I+G + ++V+
Sbjct: 11 HVLAVDDSLVDRKLIERLLKTSAYQVTVVDSGIKALEFLGLLDEEKEISGSNHQQVVEVN 70
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LIITDY MPGMTGY+LL+K+K
Sbjct: 71 LIITDYSMPGMTGYDLLRKVK--------------------------------------- 91
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSENI +RI+RCLE+GA+DF +KPVK SDV ++
Sbjct: 92 ----ESSYLKDIPVVIMSSENIPSRINRCLEEGADDFFLKPVKQSDVNKL 137
>gi|212274883|ref|NP_001130159.1| uncharacterized protein LOC100191253 [Zea mays]
gi|194688426|gb|ACF78297.1| unknown [Zea mays]
gi|194695472|gb|ACF81820.1| unknown [Zea mays]
gi|223975127|gb|ACN31751.1| unknown [Zea mays]
Length = 242
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 105/176 (59%), Gaps = 47/176 (26%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE----EQSINGFDGLKVD 86
HVLAVDDS VDRK+IE LL SS +VT VDSG +AL+ LGL + S + V+
Sbjct: 11 HVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEIDVN 70
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LIITDYCMPGMTGY+LLK++K
Sbjct: 71 LIITDYCMPGMTGYDLLKRVK--------------------------------------- 91
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
SS+L++IPVVIMSSEN+ ARI RCL+DGAE+F +KPVKL+D+K++K +L +
Sbjct: 92 ----GSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKLADMKKLKSHLLK 143
>gi|116788845|gb|ABK25022.1| unknown [Picea sitchensis]
Length = 208
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 118/232 (50%), Gaps = 70/232 (30%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI-NGFDG 82
P +E+HVLAVDD ++RKVIE+LL + KVT VDS RAL+ LG EEQS +
Sbjct: 27 PVQCDEMHVLAVDDCLIERKVIEKLLKTNFFKVTTVDSAERALEVLGFHEEQSTCAASNA 86
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
KV++IITDYCMPGMTGY+LLKK+
Sbjct: 87 FKVNMIITDYCMPGMTGYDLLKKV------------------------------------ 110
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
Q++ L+EIPVVI+SSEN+ RI CL GA+DFI+KP+KL+DV ++K ++
Sbjct: 111 -------QETKCLKEIPVVIISSENVPQRITSCLAGGAKDFIIKPLKLADVTKLKGHI-- 161
Query: 203 DVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSSPFRSPSILSSS 254
PP + S+S+ +S S P S +SS
Sbjct: 162 ------------------------KPPKDVVSTSANASSSGPVSSKRKISSG 189
>gi|297736479|emb|CBI25350.3| unnamed protein product [Vitis vinifera]
Length = 141
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 44/176 (25%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSINGFDGLKVD 86
+E HVLAVDD+ +DRK+IE+LL SC+VT ++G RAL++LGL D +Q+ + KV+
Sbjct: 7 DEPHVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVSKVN 66
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LIITDYCMPGMTGYELLK++K
Sbjct: 67 LIITDYCMPGMTGYELLKRVK--------------------------------------- 87
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
SS L+E+PVVIMSSENI RI++CLE+GA+ F++KP+K SDVK+++ YL
Sbjct: 88 ----QSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDVKKLRCYLKH 139
>gi|302804879|ref|XP_002984191.1| type A response regulator [Selaginella moellendorffii]
gi|300148040|gb|EFJ14701.1| type A response regulator [Selaginella moellendorffii]
Length = 272
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 134/251 (53%), Gaps = 52/251 (20%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+HVLAVDDS +DRKV+ERLL SS KVT VDS RAL+ LG+ + + +K++LI
Sbjct: 7 EIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVV-INAIKINLI 65
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDYCMP MTGY+LLKK+K
Sbjct: 66 ITDYCMPEMTGYDLLKKVK----------------------------------------- 84
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGN 208
+SSAL+EIPVVIMSSEN+ RI C+ +GA++FI+KP++++DVKR++ ++ R + +
Sbjct: 85 --ESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPLRVADVKRLRSHIQRHDDDDD 142
Query: 209 EGRGINKRKARESCDLS--SSPPSVITSS--SSPSSPSSPFRSPSILSSSAPCSPPSTLD 264
+ ESC L P++ +S SS P +P L+++ P
Sbjct: 143 ----DDDDDCVESCRLPCLKRKPTLTDASRLEEASSLKRPKAAPGNLTTATMADAPENTK 198
Query: 265 SPTSRLKMTIS 275
P + K TIS
Sbjct: 199 CPATSDKETIS 209
>gi|255647513|gb|ACU24220.1| unknown [Glycine max]
Length = 191
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 112/195 (57%), Gaps = 52/195 (26%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN---------G 79
+ HVLAVDDS +DR +IERLL SS VTA+DSG +AL+FLGL E++ N
Sbjct: 8 QFHVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLAEDEQRNKEPPSIALES 67
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+LIITDYCMP MTGY+LLKKIK
Sbjct: 68 HQDVEVNLIITDYCMPEMTGYDLLKKIK-------------------------------- 95
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+S +L++IPVVIMSSEN+ ARI+RCLEDGA++F +KPV+ SDV +++ +
Sbjct: 96 -----------ESKSLKDIPVVIMSSENVPARINRCLEDGADEFFLKPVQQSDVNKLRPH 144
Query: 200 LTRDVNLGNEGRGIN 214
L + E + IN
Sbjct: 145 LLKSKVKDEEVQQIN 159
>gi|242055597|ref|XP_002456944.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
gi|241928919|gb|EES02064.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
Length = 245
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 106/181 (58%), Gaps = 52/181 (28%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING---------FD 81
HVLAVDDS VDRK+IE LL SS +VT VDSG +AL+ LGL + + +
Sbjct: 11 HVLAVDDSIVDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDNGAEDASSPSSSSPDHQ 70
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
+ V+LIITDYCMPGMTGY+LLK++K
Sbjct: 71 EIDVNLIITDYCMPGMTGYDLLKRVK---------------------------------- 96
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
SS+L++IPVVIMSSEN+ ARI RCLEDGAE+F +KPVKL+D+K++K +L
Sbjct: 97 ---------GSSSLKDIPVVIMSSENVPARISRCLEDGAEEFFLKPVKLADMKKLKSHLL 147
Query: 202 R 202
+
Sbjct: 148 K 148
>gi|296090342|emb|CBI40161.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 110/188 (58%), Gaps = 59/188 (31%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCK---------------VTAVDSGRRALQFLGLDE 73
+ HVLAVDDS +DRK+IE+LL SS + VTAVDSG +AL+FLGL E
Sbjct: 8 QFHVLAVDDSLIDRKLIEKLLKTSSFQDSKLIEKLLKTSSFQVTAVDSGSKALEFLGLQE 67
Query: 74 EQSINGF-DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFI 132
E+ N +V+LIITDY MPGMTGY+LL+KIK
Sbjct: 68 EEQRNHHPQETEVNLIITDYSMPGMTGYDLLRKIK------------------------- 102
Query: 133 LSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 192
+SS+L++IPVVIMSSENI +RI+RCLE+GAEDF +KPV+LSD
Sbjct: 103 ------------------ESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSD 144
Query: 193 VKRIKDYL 200
V +++ +L
Sbjct: 145 VNKLRPHL 152
>gi|363807796|ref|NP_001242179.1| uncharacterized protein LOC100818762 [Glycine max]
gi|255633210|gb|ACU16961.1| unknown [Glycine max]
Length = 172
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 114/198 (57%), Gaps = 52/198 (26%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN---------G 79
+ VLAVDDS +DR +IERLL SS VTA+DSG +AL+FLGL E++ N
Sbjct: 8 QFQVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLVEDEQRNKEPPSIALES 67
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+LIITDYCMP MTGY+LLKKIK
Sbjct: 68 HQDVEVNLIITDYCMPEMTGYDLLKKIK-------------------------------- 95
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+S +L++IPVVIMSSEN+ ARI+RCLEDGA++F +KPV+ SDV +++ +
Sbjct: 96 -----------ESKSLKDIPVVIMSSENVPARINRCLEDGADEFFLKPVQQSDVNKLRPH 144
Query: 200 LTRDVNLGNEGRGINKRK 217
L + E + INK+K
Sbjct: 145 LLKSKVKDEEVQQINKKK 162
>gi|115442281|ref|NP_001045420.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|15528802|dbj|BAB64697.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273481|emb|CAI79408.1| Type A response regulator 4 [Oryza sativa Indica Group]
gi|87116386|dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa Japonica Group]
gi|113534951|dbj|BAF07334.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|118790806|tpd|FAA00262.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125529138|gb|EAY77252.1| hypothetical protein OsI_05226 [Oryza sativa Indica Group]
gi|125573340|gb|EAZ14855.1| hypothetical protein OsJ_04783 [Oryza sativa Japonica Group]
gi|215678767|dbj|BAG95204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 232
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 107/181 (59%), Gaps = 52/181 (28%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE---------QSINGFD 81
HVLAVDDS +DRK+IE LL SS +VT VDSG +AL+ LGL +E S
Sbjct: 11 HVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSPDHQ 70
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
+ V+LIITDYCMPGMTGY+LLK++K
Sbjct: 71 EIDVNLIITDYCMPGMTGYDLLKRVK---------------------------------- 96
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
SS+L++IPVVIMSSEN+ ARI+RCLEDGAE+F +KPVKL+D+K++K +L
Sbjct: 97 ---------GSSSLKDIPVVIMSSENVPARINRCLEDGAEEFFLKPVKLADMKKLKSHLL 147
Query: 202 R 202
+
Sbjct: 148 K 148
>gi|449437731|ref|XP_004136644.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 226
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 109/189 (57%), Gaps = 58/189 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS------------ 76
+ HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLGL +E
Sbjct: 8 QFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSF 67
Query: 77 ---INGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFIL 133
N ++V+LIITDYCMPGMTG++LLKK+K
Sbjct: 68 SSPNNHHQEVEVNLIITDYCMPGMTGFDLLKKVK-------------------------- 101
Query: 134 SICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
+S++LR IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+L DV
Sbjct: 102 -----------------ESTSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLCDV 144
Query: 194 KRIKDYLTR 202
++K ++ +
Sbjct: 145 NKLKPHMMK 153
>gi|449453183|ref|XP_004144338.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 261
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 105/181 (58%), Gaps = 52/181 (28%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS---------INGFD 81
HVLAVDDS +DRK+IE+LL SS +VT VDSG +AL+FLG D S +
Sbjct: 17 HVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDPGNSSIPSVSSNHHHHHQ 76
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
+ V+L+ITDYCMP MTGY+LLKKIK
Sbjct: 77 EVDVNLVITDYCMPEMTGYDLLKKIK---------------------------------- 102
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
S+ALR IPVVIMSSEN+ ARI+RCLE+GAE+F +KPV+LSDV R++ ++
Sbjct: 103 ---------GSTALRNIPVVIMSSENVPARINRCLEEGAEEFFLKPVQLSDVNRLRPHML 153
Query: 202 R 202
+
Sbjct: 154 K 154
>gi|449533717|ref|XP_004173818.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 255
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 105/181 (58%), Gaps = 52/181 (28%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS---------INGFD 81
HVLAVDDS +DRK+IE+LL SS +VT VDSG +AL+FLG D S +
Sbjct: 17 HVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDPGNSSIPSVSSNHHHHHQ 76
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
+ V+L+ITDYCMP MTGY+LLKKIK
Sbjct: 77 EVDVNLVITDYCMPEMTGYDLLKKIK---------------------------------- 102
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
S+ALR IPVVIMSSEN+ ARI+RCLE+GAE+F +KPV+LSDV R++ ++
Sbjct: 103 ---------GSTALRNIPVVIMSSENVPARINRCLEEGAEEFFLKPVQLSDVNRLRPHML 153
Query: 202 R 202
+
Sbjct: 154 K 154
>gi|357126832|ref|XP_003565091.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 213
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 107/183 (58%), Gaps = 54/183 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE-----------QSING 79
HVLAVDDS +DRK+IE LL SS +VT VDSG +AL+ LGL +E S
Sbjct: 12 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEGDSSSASSSPSSSSPD 71
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDYCMPGMTGY+LL+++K
Sbjct: 72 HQEVDVNLIITDYCMPGMTGYDLLRRVK-------------------------------- 99
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
SS+L++IPVVIMSSEN+ ARI+RCLEDGAE+F +KPVKL+D+K++K +
Sbjct: 100 -----------GSSSLKDIPVVIMSSENVPARINRCLEDGAEEFFLKPVKLADMKKLKSH 148
Query: 200 LTR 202
L R
Sbjct: 149 LLR 151
>gi|351724591|ref|NP_001236551.1| uncharacterized protein LOC100499827 [Glycine max]
gi|255626955|gb|ACU13822.1| unknown [Glycine max]
Length = 146
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 104/168 (61%), Gaps = 47/168 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE--EQSINGFDGLKVDLI 88
HVLAVDD+ +DRK++E+LL SSCKVT ++G RAL+ LGL + ++NG KV++I
Sbjct: 18 HVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNNMNGRS--KVNMI 75
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDYCMPGMTGYELLKKIK
Sbjct: 76 ITDYCMPGMTGYELLKKIK----------------------------------------- 94
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS ++E+PVVIMSSENI RI++CLE+GA+ FI+KP+K SDV+++
Sbjct: 95 --ESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDVRKL 140
>gi|225465887|ref|XP_002267375.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090339|emb|CBI40158.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 105/172 (61%), Gaps = 48/172 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ HVLAVDDS VDRK IE+LL SS +VT VDS +AL+FLGL E + KV+LI
Sbjct: 8 QFHVLAVDDSLVDRKWIEKLLKTSSFQVTVVDSVSKALEFLGLQEAEQER-----KVNLI 62
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDY MPGMTGY+LL+KIK
Sbjct: 63 ITDYSMPGMTGYDLLRKIK----------------------------------------- 81
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+S++L++IPVVIMSSENI +RI+RCLE+GAEDF +KPV+LSDV +++ +L
Sbjct: 82 --ESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVNKLRPHL 131
>gi|359807455|ref|NP_001241393.1| uncharacterized protein LOC100778707 [Glycine max]
gi|255637322|gb|ACU18991.1| unknown [Glycine max]
Length = 146
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 103/168 (61%), Gaps = 47/168 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE--EQSINGFDGLKVDLI 88
HVLAVDD+ +DRK++E+LL SSCKVT ++G RAL+ LGL + ++NG KV+++
Sbjct: 18 HVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNTMNGRS--KVNMV 75
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDYCMPGMTGYELLKKIK
Sbjct: 76 ITDYCMPGMTGYELLKKIK----------------------------------------- 94
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS +E+PVVIMSSENI RI++CLE+GA+ FI+KP+K SDVK++
Sbjct: 95 --ESSVTKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDVKKL 140
>gi|224146583|ref|XP_002326060.1| type-a response regulator [Populus trichocarpa]
gi|222862935|gb|EEF00442.1| type-a response regulator [Populus trichocarpa]
Length = 151
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 43/175 (24%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E+ HVLAVDDS +DRKVIERLL S+C+VT ++G+RAL++LGL + Q + LKV++
Sbjct: 17 EKPHVLAVDDSLIDRKVIERLLINSTCRVTTAENGKRALEYLGLADGQHPSHSQDLKVNM 76
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
IITDY MPGMTGYELLK+IK
Sbjct: 77 IITDYSMPGMTGYELLKRIK---------------------------------------- 96
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+S ++EIPVV++SSENI RI++C+E GA++F++KP++LSD +++ ++ +
Sbjct: 97 ---ESPTMKEIPVVVVSSENIPTRINQCMEGGAQEFLLKPLQLSDATKLRCHIKK 148
>gi|302804881|ref|XP_002984192.1| type A response regulator [Selaginella moellendorffii]
gi|300148041|gb|EFJ14702.1| type A response regulator [Selaginella moellendorffii]
Length = 278
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 134/256 (52%), Gaps = 56/256 (21%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI-----NGFDGL 83
E+HVLAVDDS +DRKV+ERLL SS KVT VDS RAL+ LG+ + + +
Sbjct: 7 EIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLAI 66
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
K++LIITDYCMP MTGY+LLKK+K
Sbjct: 67 KINLIITDYCMPEMTGYDLLKKVK------------------------------------ 90
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRD 203
+SSAL+EIPVVIMSSEN+ RI C+ +GA++FI+KP++++DVKR++ ++ R
Sbjct: 91 -------ESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPLRVADVKRLRSHIQRH 143
Query: 204 VNLGNEGRGINKRKARESCDLS--SSPPSVITSS--SSPSSPSSPFRSPSILSSSAPCSP 259
+ + + ESC L P++ +S SS P +P L+++
Sbjct: 144 DDDDD----DDDDDCVESCRLPCLKRKPTLTDASRLEEASSLKRPKAAPGNLTTATMADA 199
Query: 260 PSTLDSPTSRLKMTIS 275
P P + K TIS
Sbjct: 200 PENTKCPATSDKETIS 215
>gi|309951234|emb|CBX43987.1| putative A-type response regulator 5 [Populus x canadensis]
Length = 198
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 54/185 (29%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING--------- 79
+ HVLAVDD +DRK+IERLL SS +VTAVDSG +AL+FLGL+ E +
Sbjct: 16 QFHVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENELRDSEPASVSPD 75
Query: 80 --FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
+++++IITDYCMPGMTGY+LLKKIK
Sbjct: 76 PYHQHIEINMIITDYCMPGMTGYDLLKKIK------------------------------ 105
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+S ++IPVVIMSSEN+ +RI+RCL++GAE+F +KPV+LSDV +++
Sbjct: 106 -------------ESKYFKDIPVVIMSSENVPSRINRCLKEGAEEFFLKPVQLSDVNKLR 152
Query: 198 DYLTR 202
+L +
Sbjct: 153 PHLMK 157
>gi|357160996|ref|XP_003578944.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 225
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 49/180 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS-----INGFD-G 82
+ HVLAVDDS DRK+IERLL SS +VT VDSG +AL+FLG+ + + + D
Sbjct: 9 QFHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGTKALEFLGIHGQDTPISLHADHLDVE 68
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
+ V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 69 VNVNLIITDYCMPGMTGYDLLKKIK----------------------------------- 93
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS+LR+IPVVIMSSEN+ +RI+RCLE+GA +F +KPV+LSD+ ++K ++ +
Sbjct: 94 --------ESSSLRDIPVVIMSSENVPSRINRCLEEGANEFFLKPVRLSDMSKLKPHIMK 145
>gi|224053258|ref|XP_002297741.1| type-a response regulator [Populus trichocarpa]
gi|222844999|gb|EEE82546.1| type-a response regulator [Populus trichocarpa]
Length = 203
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 54/185 (29%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING--------- 79
+ HVLAVDD +DRK+IERLL SS +VTAVDSG +AL+FLGL+ E +
Sbjct: 16 QFHVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENELRDSKPASVSPD 75
Query: 80 --FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
+++++IITDYCMPGMTGY+LLKKIK
Sbjct: 76 PYHQHIEINMIITDYCMPGMTGYDLLKKIK------------------------------ 105
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+S ++IPVVIMSSEN+ +RI+RCL++GAE+F +KPV+LSDV +++
Sbjct: 106 -------------ESKYFKDIPVVIMSSENVPSRINRCLKEGAEEFFLKPVQLSDVNKLR 152
Query: 198 DYLTR 202
+L +
Sbjct: 153 PHLMK 157
>gi|356541574|ref|XP_003539249.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 187
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 109/183 (59%), Gaps = 52/183 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ---------SING 79
+ HVLAVDDS +DR +IERLL SS VTAVDSG +AL+FLGL EE+ ++
Sbjct: 8 QFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEEKRNEEPPPCIALES 67
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+LIITDYCMP MTGY+LL+KIK
Sbjct: 68 HQDVEVNLIITDYCMPEMTGYDLLRKIK-------------------------------- 95
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+S +L++IPVVIMSSEN+ ARI+RCLE+GA++F +KPV+ SDV +++ +
Sbjct: 96 -----------ESKSLKDIPVVIMSSENVPARINRCLEEGADEFFLKPVQQSDVNKLRPH 144
Query: 200 LTR 202
L +
Sbjct: 145 LMK 147
>gi|115484121|ref|NP_001065722.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|71273491|emb|CAI79413.1| Type A response regulator 9 [Oryza sativa Indica Group]
gi|87116388|dbj|BAE79353.1| typeA response regulator 9 [Oryza sativa Japonica Group]
gi|108863989|gb|ABA91415.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|113644426|dbj|BAF27567.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|118790795|tpd|FAA00260.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215765046|dbj|BAG86743.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185231|gb|EEC67658.1| hypothetical protein OsI_35072 [Oryza sativa Indica Group]
gi|222615502|gb|EEE51634.1| hypothetical protein OsJ_32929 [Oryza sativa Japonica Group]
Length = 201
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 108/177 (61%), Gaps = 48/177 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ-----SINGFDGLKV 85
HVLAVDDS DRK+IERLL SS +VT VDSG +AL+FLGL + + + + + V
Sbjct: 10 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVAV 69
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LIITDYCMPGMTGY+LLKKIK
Sbjct: 70 NLIITDYCMPGMTGYDLLKKIK-------------------------------------- 91
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS LR+IPVVIMSS+NI +RI+RCLE+GA++F +KPV+LSD+ ++K ++ +
Sbjct: 92 -----ESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILK 143
>gi|109631208|gb|ABG35780.1| SRR198 [Striga asiatica]
Length = 238
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 108/189 (57%), Gaps = 52/189 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING--------- 79
+ HVLAVDDS +DRK+IE+LL SS +VT VDSG +AL+FLG ++ N
Sbjct: 9 QFHVLAVDDSLIDRKLIEKLLKNSSFQVTTVDSGSKALEFLGWHRDERSNSKGTSVSPKT 68
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+L+ITDYCMPGMTGY+LLKK+K
Sbjct: 69 HQEVEVNLVITDYCMPGMTGYDLLKKMK-------------------------------- 96
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS+L+ IPVVI+SSEN+ +RI RCLE+GAE+F +KP+KL+DV ++ Y
Sbjct: 97 -----------ESSSLKNIPVVIVSSENVPSRITRCLEEGAEEFFLKPMKLTDVNKLWPY 145
Query: 200 LTRDVNLGN 208
+ R N
Sbjct: 146 MLRTKGQNN 154
>gi|346703374|emb|CBX25471.1| hypothetical_protein [Oryza glaberrima]
Length = 201
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 108/177 (61%), Gaps = 48/177 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ-----SINGFDGLKV 85
HVLAVDDS DRK+IERLL SS +VT VDSG +AL+FLGL + + + + + V
Sbjct: 10 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVAV 69
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LIITDYCMPGMTGY+LLKKIK
Sbjct: 70 NLIITDYCMPGMTGYDLLKKIK-------------------------------------- 91
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS LR+IPVVIMSS+NI +RI+RCLE+GA++F +KPV+LSD+ ++K ++ +
Sbjct: 92 -----ESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILK 143
>gi|346703189|emb|CBX25288.1| hypothetical_protein [Oryza brachyantha]
Length = 200
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 106/177 (59%), Gaps = 48/177 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ----SING-FDGLKV 85
HVLAVDDS DRK+IERLL SS +VT VDSG +AL+FLGL + S+ V
Sbjct: 10 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHGHEDSPISVQADQQEAAV 69
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LIITDYCMPGMTGY+LLKKIK
Sbjct: 70 NLIITDYCMPGMTGYDLLKKIK-------------------------------------- 91
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS LR+IPVVIMSSENI +RI+RCLE+GA++F +KPV+LSD+ ++K ++ +
Sbjct: 92 -----ESSYLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILK 143
>gi|449449356|ref|XP_004142431.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527272|ref|XP_004170636.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 173
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 115/211 (54%), Gaps = 60/211 (28%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING----- 79
SD HVLAVDDS VDRK+IERLL SS VT VDSG +AL+ LGL E+ NG
Sbjct: 6 SDQPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRER--NGTNHSS 63
Query: 80 ----------FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
++V+LIITDYCMP MTG++LL+KIK
Sbjct: 64 PISPEDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIK---------------------- 101
Query: 130 LFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
+S +L++IPVVIMSSEN+ +RI+RCLE+GAE+F++KPVK
Sbjct: 102 ---------------------ESDSLKDIPVVIMSSENVPSRINRCLEEGAEEFLLKPVK 140
Query: 190 LSDVKRIKDYLTRDVNLGNEGRGINKRKARE 220
LSDV ++K ++ R + KRK E
Sbjct: 141 LSDVNKLKPFICRGIKAKEMDFNHLKRKEME 171
>gi|359828772|gb|AEV76988.1| type A response regulator 4, partial [Triticum aestivum]
Length = 203
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 106/182 (58%), Gaps = 53/182 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE----------QSINGF 80
HVLAVDDS +DRK+IE LL SS +VT VDSG +AL+ LG +E + +
Sbjct: 11 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGFRDEGDDSSSPPSSSAPDHH 70
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
+ V+LIITDYCMPGMTGY+LL+++K
Sbjct: 71 QEVGVNLIITDYCMPGMTGYDLLRRVK--------------------------------- 97
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
SS+L++IPVVIMSSEN+ ARI RCLEDGAE+F +KPVKL+D+K++K +L
Sbjct: 98 ----------GSSSLKDIPVVIMSSENVPARISRCLEDGAEEFFLKPVKLADMKKLKSHL 147
Query: 201 TR 202
R
Sbjct: 148 VR 149
>gi|297612639|ref|NP_001066118.2| Os12g0139400 [Oryza sativa Japonica Group]
gi|87116390|dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa Japonica Group]
gi|108862172|gb|ABA96406.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|118790800|tpd|FAA00261.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218186409|gb|EEC68836.1| hypothetical protein OsI_37415 [Oryza sativa Indica Group]
gi|222616614|gb|EEE52746.1| hypothetical protein OsJ_35177 [Oryza sativa Japonica Group]
gi|255670034|dbj|BAF29137.2| Os12g0139400 [Oryza sativa Japonica Group]
Length = 201
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 108/177 (61%), Gaps = 48/177 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ-----SINGFDGLKV 85
HVLAVDDS DRK+IERLL SS +VT VDSG +AL+FLGL + + + + + V
Sbjct: 10 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVGV 69
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LIITDYCMPGMTGY+LLKKIK
Sbjct: 70 NLIITDYCMPGMTGYDLLKKIK-------------------------------------- 91
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS LR+IPVVIMSS+NI +RI+RCLE+GA++F +KPV+LSD+ ++K ++ +
Sbjct: 92 -----ESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPHILK 143
>gi|302798272|ref|XP_002980896.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
gi|300151435|gb|EFJ18081.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
Length = 222
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 103/173 (59%), Gaps = 48/173 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSC--KVTAVDSGRRALQFLGLDEEQSINGF---DGL 83
++HVLAVDDS VDR VIERLL SS KVTAVDS RAL+ LG+ + Q+ +G+
Sbjct: 52 QIHVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSALRALEILGIVDGQASPAAAPSEGI 111
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
++ +IITDYCMP MTGY+LLK++K
Sbjct: 112 QISMIITDYCMPHMTGYDLLKRVK------------------------------------ 135
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
S+L+EIPVVIMSSEN+ RI+ C E+GAEDFI+KPVKL+DVKR+
Sbjct: 136 -------GVSSLKEIPVVIMSSENVEQRINSCYEEGAEDFIIKPVKLADVKRL 181
>gi|302755905|ref|XP_002961376.1| type A response regulator [Selaginella moellendorffii]
gi|300170035|gb|EFJ36636.1| type A response regulator [Selaginella moellendorffii]
Length = 220
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 103/173 (59%), Gaps = 48/173 (27%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSC--KVTAVDSGRRALQFLGLDEEQSINGF---DGL 83
++HVLAVDDS VDR VIERLL SS KVTAVDS RAL+ LG+ + Q+ +G+
Sbjct: 50 QIHVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSALRALEILGIVDGQASPAAAPSEGI 109
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
++ +IITDYCMP MTGY+LLK++K
Sbjct: 110 QISMIITDYCMPHMTGYDLLKRVK------------------------------------ 133
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
S+L+EIPVVIMSSEN+ RI+ C E+GAEDFI+KPVKL+DVKR+
Sbjct: 134 -------GVSSLKEIPVVIMSSENVEQRINSCYEEGAEDFIIKPVKLADVKRL 179
>gi|168029974|ref|XP_001767499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681205|gb|EDQ67634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 100/169 (59%), Gaps = 43/169 (25%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK-VDL 87
E HVLAVDDS +DRKVIERLL SS KVT V+S RAL++LGL E S +G ++ V+L
Sbjct: 18 EYHVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGLSESCSSSGKPNVRAVNL 77
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
I+TDYCMPGMTGY+LLK +K T
Sbjct: 78 IMTDYCMPGMTGYDLLKIVKAET------------------------------------- 100
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
SA +E+PV++MSSEN RI CL +GAEDF++KPV+L DV+R+
Sbjct: 101 -----SAFKELPVIVMSSENDSNRIKSCLAEGAEDFLIKPVQLEDVQRL 144
>gi|255559713|ref|XP_002520876.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223540007|gb|EEF41585.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 155
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 107/168 (63%), Gaps = 44/168 (26%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL-DEEQSINGFDGLKVDLII 89
HVLAVDD+ +DRK++E+LL S CKVT ++G RAL++LGL D++++ + KV+LII
Sbjct: 23 HVLAVDDNLIDRKLVEKLLKNSCCKVTTAENGLRALEYLGLGDDDRNCLENNVSKVNLII 82
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TDYCMPGMTGYELLKKIK
Sbjct: 83 TDYCMPGMTGYELLKKIK------------------------------------------ 100
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
+SS ++E+PVVI+SSENI RI++CLE+GA+ F++KP+KLSDVK+++
Sbjct: 101 -ESSIMKEVPVVIVSSENIPTRINKCLEEGAQMFMLKPLKLSDVKKLR 147
>gi|109631210|gb|ABG35781.1| SRR197 [Striga asiatica]
Length = 211
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 44/174 (25%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ HV AVDDS +DRK+IERLL SS +VT VDSG +AL+FLG + N + ++V+L+
Sbjct: 9 QFHVFAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGESCDSPKNQQE-IEVNLV 67
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDYCMPGMTGY+LLKK+K
Sbjct: 68 ITDYCMPGMTGYDLLKKMK----------------------------------------- 86
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS LR+IPVVI+SSEN+ +RI+RCLE+G E+F +KPV+LSDV +++ ++ +
Sbjct: 87 --ESSFLRDIPVVILSSENVPSRINRCLEEGTEEFFLKPVRLSDVNKLRPHMMK 138
>gi|388492888|gb|AFK34510.1| unknown [Medicago truncatula]
Length = 167
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 115/198 (58%), Gaps = 53/198 (26%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF-------- 80
+ HVLAVDDS +DR +IERLL SS VT VDSG +AL+FLGL E++ N
Sbjct: 3 QFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSIAAET 62
Query: 81 -DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+LIITDYCMPGMTGY+LL+KIK
Sbjct: 63 DQVVEVNLIITDYCMPGMTGYDLLRKIK-------------------------------- 90
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+S++L++IPVVI SSEN+ +RI+RCLE+GAE+F +KPV+ SDV ++K +
Sbjct: 91 -----------ESNSLKDIPVVITSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPH 139
Query: 200 LTRDVNLGNEGRGINKRK 217
L + + NE IN ++
Sbjct: 140 LLK-TKVKNEDDLINNKR 156
>gi|357515051|ref|XP_003627814.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|92885116|gb|ABE87636.1| Response regulator receiver [Medicago truncatula]
gi|355521836|gb|AET02290.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|388516389|gb|AFK46256.1| unknown [Medicago truncatula]
Length = 177
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 114/201 (56%), Gaps = 54/201 (26%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD------- 81
+ HVLAVDDS +DR +IERLL SS VT VDS +AL+FLGL E++ + +D
Sbjct: 8 QFHVLAVDDSIIDRMLIERLLKTSSFNVTTVDSASKALKFLGLVEDE-MRTYDTHVASEI 66
Query: 82 --GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDYCMPGMTGY+LL+KIK
Sbjct: 67 NQDVDVNLIITDYCMPGMTGYDLLRKIK-------------------------------- 94
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+S + ++IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+LSDV ++K +
Sbjct: 95 -----------ESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVSKLKPH 143
Query: 200 LTRDVNLGNEGRGINKRKARE 220
L + + E KRK E
Sbjct: 144 LLKS-KVKEENEQPIKRKGME 163
>gi|309951230|emb|CBX43985.1| putative A-type response regulator 3 [Populus x canadensis]
Length = 242
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 111/184 (60%), Gaps = 56/184 (30%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG-LDEEQSING---------- 79
HVLAVDDSF+DRK++ERLL +SS +VT VDSG +AL++LG LD ++N
Sbjct: 46 HVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDNVNATSSSSSSQSP 105
Query: 80 -FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
+G+KV+LI+TDYCMPGM+GY+LLK++K
Sbjct: 106 QQEGMKVNLIMTDYCMPGMSGYDLLKRVK------------------------------- 134
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
S +++PVV+MSSENI +RI CLE+GAE+F++KP++LSDV++++
Sbjct: 135 -------------GSYWKDVPVVVMSSENIPSRIRMCLEEGAEEFLLKPLQLSDVEKLQT 181
Query: 199 YLTR 202
+L +
Sbjct: 182 HLLK 185
>gi|346703759|emb|CBX24427.1| hypothetical_protein [Oryza glaberrima]
Length = 207
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 107/183 (58%), Gaps = 54/183 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISS-------CKVTAVDSGRRALQFLGLDEEQ----SING 79
HVLAVDDS DRK+IERLL SS C VT VDSG +AL+FLGL + + S
Sbjct: 10 HVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDHEDSPISAQS 69
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 70 DQQVAVNLIITDYCMPGMTGYDLLKKIK-------------------------------- 97
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+SS LR+IPVVIMSS+NI +RI+RCLE+GA++F +KPV+LSD+ ++K +
Sbjct: 98 -----------ESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKPH 146
Query: 200 LTR 202
+ +
Sbjct: 147 ILK 149
>gi|224066817|ref|XP_002302230.1| type-a response regulator [Populus trichocarpa]
gi|222843956|gb|EEE81503.1| type-a response regulator [Populus trichocarpa]
Length = 243
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 56/187 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG-LDEEQSING---------- 79
HVLAVDDSF+DRK++ERLL +SS +VT VDSG +AL++LG LD ++N
Sbjct: 47 HVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDNVNATSSSSSSQSP 106
Query: 80 -FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
+G+KV+LI+TDYCMPGM+GY+LLK++K
Sbjct: 107 QQEGMKVNLIMTDYCMPGMSGYDLLKRVK------------------------------- 135
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
S +++PVV+MSSENI +RI CLE+GAE+F++KP++LSDV++++
Sbjct: 136 -------------GSYWKDVPVVVMSSENIPSRIRMCLEEGAEEFLLKPLQLSDVEKLQT 182
Query: 199 YLTRDVN 205
+L + ++
Sbjct: 183 HLLKSLD 189
>gi|356555024|ref|XP_003545839.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 114/202 (56%), Gaps = 54/202 (26%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD------- 81
+ HVLAVDDS +DR +IERLL SS VT VDS +AL+FLGL E++ + FD
Sbjct: 8 QFHVLAVDDSIIDRMLIERLLKTSSFHVTTVDSATKALKFLGLVEDE-LRTFDTTVASEI 66
Query: 82 --GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ ++LIITDYCMPGMTGY+LL+KIK
Sbjct: 67 HQDVDINLIITDYCMPGMTGYDLLRKIK-------------------------------- 94
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+S +L+ IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+ +DV ++K +
Sbjct: 95 -----------ESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQADVNKLKPH 143
Query: 200 LTRDVNLGNEGRGI-NKRKARE 220
L + + + NKRK E
Sbjct: 144 LMKSRAKEEQDQPFNNKRKDME 165
>gi|109390454|gb|ABG33766.1| reponse regulator 6 [Musa acuminata]
Length = 156
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 98/165 (59%), Gaps = 50/165 (30%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD-EEQSINGFDG------L 83
HVLAVDDS +DRK+IERLL SS +VT VDSG +ALQFLGL E+ SI+ +
Sbjct: 35 HVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDASISSVHADQLDVEV 94
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 95 NVNLIITDYCMPGMTGYDLLKKIK------------------------------------ 118
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+SS+ R+IPVVIMSSENI +RI+RCLE+GA +F +KPV
Sbjct: 119 -------ESSSFRDIPVVIMSSENIPSRINRCLEEGANEFFLKPV 156
>gi|108863990|gb|ABA91414.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
Length = 208
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 108/184 (58%), Gaps = 55/184 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISS-------CKVTAVDSGRRALQFLGLDEEQ-----SIN 78
HVLAVDDS DRK+IERLL SS C VT VDSG +AL+FLGL + + + +
Sbjct: 10 HVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDHEDSPISTQS 69
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
+ V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 70 DQQEVAVNLIITDYCMPGMTGYDLLKKIK------------------------------- 98
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
+SS LR+IPVVIMSS+NI +RI+RCLE+GA++F +KPV+LSD+ ++K
Sbjct: 99 ------------ESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLSDMSKLKP 146
Query: 199 YLTR 202
++ +
Sbjct: 147 HILK 150
>gi|302781008|ref|XP_002972278.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
gi|300159745|gb|EFJ26364.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
Length = 293
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 135/270 (50%), Gaps = 69/270 (25%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL----------------- 71
E+HVLAVDDS +DRKV+ERLL SS KVT VDS RAL+ LG+
Sbjct: 7 EIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLVH 66
Query: 72 --DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
+ +K++LIITDYCMP MTGY+LLKK+K
Sbjct: 67 FLCFLWLLLLLQAIKINLIITDYCMPEMTGYDLLKKVK---------------------- 104
Query: 130 LFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
+SSAL+EIPVVIMSSEN+ RI C+ +GA++FI+KP++
Sbjct: 105 ---------------------ESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPLR 143
Query: 190 LSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLS--SSPPSVITSS--SSPSSPSSPF 245
++DVKR++ ++ R + ++ + ESC L P++ +S SS P
Sbjct: 144 VADVKRLRSHIQRHDDDDDD---DDDDDCVESCRLPCLKRKPTLTDASRLEEASSLKRPK 200
Query: 246 RSPSILSSSAPCSPPSTLDSPTSRLKMTIS 275
+P L++++ P P + K TIS
Sbjct: 201 TAPGNLTTASMADAPENTKCPATSDKETIS 230
>gi|168002238|ref|XP_001753821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695228|gb|EDQ81573.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 124
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 100/166 (60%), Gaps = 43/166 (25%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS +D++VIERLL SS +VT V+S RAL LGL E +S + L ++LI+T
Sbjct: 2 HVLAVDDSSIDQRVIERLLKTSSYRVTTVNSAVRALDVLGLSESRSASS-TRLDINLIMT 60
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DYCMP MTGY+LLK++K T
Sbjct: 61 DYCMPEMTGYDLLKRVKAQT---------------------------------------- 80
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
SAL+EIPVV+MSSEN RI+RCL +GAE+FI+KPVK++DVKR+
Sbjct: 81 --SALKEIPVVLMSSENDSNRIERCLAEGAEEFIIKPVKMADVKRL 124
>gi|225465889|ref|XP_002266250.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 150
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 102/172 (59%), Gaps = 44/172 (25%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ HVLAVDDS +DRK IE+LL SS +VT V S +AL+FLGL + + N G KV+LI
Sbjct: 8 QFHVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHHQGTKVNLI 67
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
IT Y MPGMTGY+LLKKIK
Sbjct: 68 ITYYSMPGMTGYDLLKKIK----------------------------------------- 86
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+S++L+ IPVVIMSSENI +RI+RCLE G +DF +KPV+LSDV +++ +L
Sbjct: 87 --ESTSLKGIPVVIMSSENIPSRINRCLE-GEKDFFLKPVQLSDVNKLRPHL 135
>gi|296090340|emb|CBI40159.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 102/172 (59%), Gaps = 44/172 (25%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ HVLAVDDS +DRK IE+LL SS +VT V S +AL+FLGL + + N G KV+LI
Sbjct: 8 QFHVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHHQGTKVNLI 67
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
IT Y MPGMTGY+LLKKIK
Sbjct: 68 ITYYSMPGMTGYDLLKKIK----------------------------------------- 86
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+S++L+ IPVVIMSSENI +RI+RCLE G +DF +KPV+LSDV +++ +L
Sbjct: 87 --ESTSLKGIPVVIMSSENIPSRINRCLE-GEKDFFLKPVQLSDVNKLRPHL 135
>gi|226492050|ref|NP_001146776.1| uncharacterized protein LOC100280379 [Zea mays]
gi|223942947|gb|ACN25557.1| unknown [Zea mays]
gi|413951289|gb|AFW83938.1| response regulator 4 [Zea mays]
Length = 233
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 104/188 (55%), Gaps = 59/188 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING----------- 79
HVLAVDDS +DRK+IE LL SS +VT VDSG +AL+ LGL + + +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSSSSSSS 70
Query: 80 -----FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILS 134
+ V LIITDYCMPGMTGY+LLK++K
Sbjct: 71 SSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVK--------------------------- 103
Query: 135 ICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
SS+L++IPVVIMSSEN+ ARI RCL+DGAE+F +KPVK +D+K
Sbjct: 104 ----------------GSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKPADMK 147
Query: 195 RIKDYLTR 202
++K +L +
Sbjct: 148 KLKSHLLK 155
>gi|346703278|emb|CBX25376.1| hypothetical_protein [Oryza brachyantha]
Length = 215
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 106/184 (57%), Gaps = 55/184 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCK-------VTAVDSGRRALQFLGLDEEQ----SING 79
HVLAVDDS DRK+IERLL SS + VT VDSG +AL+FLGL + S+
Sbjct: 10 HVLAVDDSLPDRKLIERLLKTSSFQGFGFVGVVTTVDSGSKALEFLGLHAHEDSPISVQA 69
Query: 80 -FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
V+LIITDYCMPGMTGY+LLKKIK
Sbjct: 70 DQQEAAVNLIITDYCMPGMTGYDLLKKIK------------------------------- 98
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
+SS LR+IPVVIMSSENI +RI+RCLE+GA++F +KPV+LSD+ ++K
Sbjct: 99 ------------ESSCLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPVRLSDMSKLKP 146
Query: 199 YLTR 202
++ +
Sbjct: 147 HILK 150
>gi|356546360|ref|XP_003541594.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 53/183 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD------- 81
+ HVLAVDDS +DR +IERLL SS VT +DS +AL+FLGL E++ + FD
Sbjct: 8 QFHVLAVDDSIIDRMLIERLLKTSSFHVTTLDSATKALKFLGLVEDE-LRTFDTTVASEI 66
Query: 82 --GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDYCMPG+TGY+LL+KIK
Sbjct: 67 HQDVDVNLIITDYCMPGLTGYDLLRKIK-------------------------------- 94
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+S +L+ IPVVIMSSEN+ +RI+RCLE+GAE+F +KPV+ +DV ++K +
Sbjct: 95 -----------ESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQADVNKLKPH 143
Query: 200 LTR 202
L +
Sbjct: 144 LMK 146
>gi|168002910|ref|XP_001754156.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694710|gb|EDQ81057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 104/176 (59%), Gaps = 46/176 (26%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ----SINGFDGLK 84
+ HVLAVDDS +D++VIE+LL SS KVT V+S RAL+ LGL + + L
Sbjct: 1 QYHVLAVDDSRIDQRVIEKLLKTSSYKVTTVNSALRALELLGLSDSSPSSIKVPLLQKLD 60
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
++LI+TDYCMP MTGY+LLK++K
Sbjct: 61 INLIMTDYCMPEMTGYDLLKRVKA------------------------------------ 84
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
D+SAL+EIPVV+MSSEN RI+RCL +GAE+FI+KPV+++DVKR++ ++
Sbjct: 85 ------DTSALKEIPVVVMSSENDSNRIERCLAEGAEEFIIKPVQMADVKRLRGHI 134
>gi|168001998|ref|XP_001753701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695108|gb|EDQ81453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 132
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 100/169 (59%), Gaps = 43/169 (25%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN-GFDGLKVDL 87
E HVLAVDDS +DRKVIERLL SS KVT V+S RAL++LGL E S + + + V+L
Sbjct: 6 EYHVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGLSESCSTSVKANKVTVNL 65
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
I+TDYCMP MTGY+LLK +K T
Sbjct: 66 IMTDYCMPEMTGYDLLKIVKAET------------------------------------- 88
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
SA +E+PV++MSSEN RI RCLE+GA++F++KPV++ DV+R+
Sbjct: 89 -----SAFKELPVIVMSSENDSNRIKRCLEEGAKEFLIKPVQIEDVQRL 132
>gi|195644464|gb|ACG41700.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 234
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 104/187 (55%), Gaps = 58/187 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING----------- 79
HVLAVDDS +DRK+IE LL SS +VT V+SG +AL+ LGL + + +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSSSSSSS 70
Query: 80 ----FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSI 135
+ V LIITDYCMPGMTGY+LLK++K
Sbjct: 71 SSPDHQEIDVSLIITDYCMPGMTGYDLLKRVK---------------------------- 102
Query: 136 CFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
SS+L++IPVVIMSSEN+ ARI RCL+DGAE+F +KPVK +D+K+
Sbjct: 103 ---------------GSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKPADMKK 147
Query: 196 IKDYLTR 202
+K +L +
Sbjct: 148 LKSHLLK 154
>gi|33330866|gb|AAQ10676.1| type-A response regulator [Catharanthus roseus]
Length = 154
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 111/194 (57%), Gaps = 56/194 (28%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG----------- 70
++ D +E+HVLAVDD+ +DRK++E+LL SSCKVT ++G RAL++LG
Sbjct: 1 MADDDRKELHVLAVDDNIIDRKIVEKLLISSSCKVTTAENGIRALEYLGNLGVHSESQTP 60
Query: 71 -LDEEQSINGFDG-LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNL 128
L ++ +I G LKV+LIITDYC P MTGYELLKKIK
Sbjct: 61 ALHQDDAIPTAAGDLKVNLIITDYCKPEMTGYELLKKIK--------------------- 99
Query: 129 FLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+SS L++IPV++MSSENI RI +CLE+GA+ F++KP+
Sbjct: 100 ----------------------ESSILKDIPVIVMSSENIPTRIHKCLEEGAQMFMLKPL 137
Query: 189 KLSDVKRIKDYLTR 202
K SDV R++ L +
Sbjct: 138 KHSDVTRLRCQLMQ 151
>gi|357144070|ref|XP_003573159.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 135
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 96/168 (57%), Gaps = 53/168 (31%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+HVLAVDDS VDR +I RLL S +VT VDSG+RAL+ L L+ E V +I
Sbjct: 6 ELHVLAVDDSLVDRAIISRLLRSSKYQVTTVDSGKRALEVLSLERE----------VHMI 55
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDYCMP MTGYELLK++K
Sbjct: 56 ITDYCMPEMTGYELLKRVK----------------------------------------- 74
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+++ LREIPVVIMSSEN ARI RCLE+GAE+F++KPV+ SDV R+
Sbjct: 75 --ETAELREIPVVIMSSENSPARIRRCLEEGAEEFLIKPVRPSDVSRL 120
>gi|162459025|ref|NP_001104855.1| LOC541630 [Zea mays]
gi|12060384|dbj|BAB20579.1| response regulator 4 [Zea mays]
Length = 235
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 104/188 (55%), Gaps = 59/188 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING----------- 79
HVLAVDDS +DRK+IE LL SS +VT V+SG +AL+ LGL + + +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSSSSSSS 70
Query: 80 -----FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILS 134
+ V LIITDYCMPGMTGY+LLK++K
Sbjct: 71 SSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVK--------------------------- 103
Query: 135 ICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
SS+L++IPVVIMSSEN+ ARI RCL+DGAE+F +KPVK +D+K
Sbjct: 104 ----------------GSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKPADMK 147
Query: 195 RIKDYLTR 202
++K +L +
Sbjct: 148 KLKSHLLK 155
>gi|217075290|gb|ACJ86005.1| unknown [Medicago truncatula]
gi|388493820|gb|AFK34976.1| unknown [Medicago truncatula]
Length = 235
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 112/203 (55%), Gaps = 64/203 (31%)
Query: 20 FDLSPSD--TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE--- 74
L P + E HVLAVDDS +DR ++ERLL SSCKVT VDSG +AL++LGL+ +
Sbjct: 10 LQLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEIS 69
Query: 75 ---------------QSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
Q + +G KV+LI+TDYCMPGM+GY+LLK++K
Sbjct: 70 STKSSILESSSPSLPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVK------------ 117
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
S+ +++PVV+MSSEN+ +RI CLE+G
Sbjct: 118 --------------------------------GSSWKDVPVVVMSSENVPSRISMCLEEG 145
Query: 180 AEDFIVKPVKLSDVKRIKDYLTR 202
AE+F++KP++LSD+++++ Y +
Sbjct: 146 AEEFLMKPLQLSDLQKLQPYFLK 168
>gi|359495010|ref|XP_003634897.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR9-like [Vitis vinifera]
Length = 141
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 104/173 (60%), Gaps = 49/173 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ HVLAVDDS +DRK IE+LL SS +VT +DS +AL+FLG+ E + KV+LI
Sbjct: 8 QFHVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLGVQEAEQER-----KVNLI 62
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDY MPGMTGY+LL+KIK
Sbjct: 63 ITDYSMPGMTGYDLLRKIK----------------------------------------- 81
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVK-PVKLSDVKRIKDYL 200
+S++L++IPVVIMSSENI +RI RCLE+GAEDF +K PV+LSDV +++ +L
Sbjct: 82 --ESTSLKDIPVVIMSSENIPSRITRCLEEGAEDFFLKLPVQLSDVNKLRPHL 132
>gi|388511879|gb|AFK44001.1| unknown [Medicago truncatula]
Length = 235
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 112/203 (55%), Gaps = 64/203 (31%)
Query: 20 FDLSPSD--TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE--- 74
L P + E HVLAVDDS +DR ++ERLL SSCKVT VDSG +AL++LGL+ +
Sbjct: 10 LQLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEIS 69
Query: 75 ---------------QSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
Q + +G KV+LI+TDYCMPGM+GY+LLK++K
Sbjct: 70 STKSSILESSSPSLPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVK------------ 117
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
S+ +++PVV+MSSEN+ +RI CLE+G
Sbjct: 118 --------------------------------GSSWKDVPVVVMSSENVPSRISMCLEEG 145
Query: 180 AEDFIVKPVKLSDVKRIKDYLTR 202
AE+F++KP++LSD+++++ Y +
Sbjct: 146 AEEFLMKPLQLSDLQKLQPYFLK 168
>gi|356515915|ref|XP_003526642.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 232
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 113/202 (55%), Gaps = 63/202 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE---------------- 74
HVLAVDDS +DRK++ERLL SSCKVT VDSG +AL++LGL +E
Sbjct: 24 HVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTTLESESSHP 83
Query: 75 --QSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFI 132
Q + +G+KV+LI+TDYCMPGM+GY+LLK++K
Sbjct: 84 PPQPLQQ-EGIKVNLIMTDYCMPGMSGYDLLKRVK------------------------- 117
Query: 133 LSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 192
S+ +++PVVIMSSEN+ +RI CLE+GA++F++KP++LSD
Sbjct: 118 -------------------GSSWKDVPVVIMSSENVPSRISMCLEEGAQEFLLKPLQLSD 158
Query: 193 VKRIKDYLTRDVNLGNEGRGIN 214
+ +++ Y + ++ E N
Sbjct: 159 LDKLQPYFLKSLDNSCEKESAN 180
>gi|383792043|dbj|BAM10424.1| Type-a response regulator protein, partial [Salix japonica]
Length = 94
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 84/137 (61%), Gaps = 43/137 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLAVDDSFVDRKVIERLL ISSCKVT V+SG RALQ+LGLD E+S GF+ LK+ LI+TD
Sbjct: 1 VLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSVGFNDLKIHLIMTD 60
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
Y MPGMTGYELLKKIK +
Sbjct: 61 YSMPGMTGYELLKKIK-------------------------------------------E 77
Query: 152 SSALREIPVVIMSSENI 168
SSA REIPVVIMSSENI
Sbjct: 78 SSAFREIPVVIMSSENI 94
>gi|255646817|gb|ACU23880.1| unknown [Glycine max]
Length = 235
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 61/200 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE---------QSINGF-- 80
VLAVDDS +DRK++ERLL SSCKVT VDSG +AL++LGL +E +S +
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTPLESESSHPP 85
Query: 81 ------DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILS 134
+G+KV+LI+TDYCMPGM+GY+LLK++K
Sbjct: 86 PQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVK--------------------------- 118
Query: 135 ICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
S+ +++PVVIMSSEN+ +RI CLE+GAE+F++KP++LSD+
Sbjct: 119 -----------------GSSWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLQLSDLD 161
Query: 195 RIKDYLTRDVNLGNEGRGIN 214
+++ Y + V+ E N
Sbjct: 162 KLQPYFLKSVDNSCEKESAN 181
>gi|357496037|ref|XP_003618307.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355493322|gb|AES74525.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 207
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 112/196 (57%), Gaps = 20/196 (10%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
+S + + HVLAVDDS +DR +IERLL SS VT +DS +AL+FLGL E+ +
Sbjct: 3 ISMAAETQFHVLAVDDSIIDRMLIERLLKTSSFHVTTMDSASKALKFLGLVEDVASEVHG 62
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNF--LYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LII DYCMPGMTGY+LL+KIK N L I L+ L + F
Sbjct: 63 DVDVNLIIADYCMPGMTGYDLLRKIKGARKVNLGRLKLKIATKSKLRRLG----RVVFLG 118
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARID-------------RCLEDGAEDFIVK 186
NLE ++IPVVIMSSEN+ +RI +C E+GAE+F +K
Sbjct: 119 AKITTLGNLE-GIQTFKDIPVVIMSSENVSSRISSLTYYGLIVCNCIKCFEEGAEEFFLK 177
Query: 187 PVKLSDVKRIKDYLTR 202
PV+ SDV ++K +L +
Sbjct: 178 PVQQSDVNKLKPHLLK 193
>gi|388511259|gb|AFK43691.1| unknown [Lotus japonicus]
Length = 224
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 111/190 (58%), Gaps = 60/190 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE---------------Q 75
HVLAVDDS +DRK++ERLL SSCKVT VDSG +AL++LGL ++ Q
Sbjct: 23 HVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPISPQ 82
Query: 76 SINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSI 135
+ +G+KV+LI+TD+CMPGM+GY+LLK++K
Sbjct: 83 QVEQ-EGIKVNLIMTDFCMPGMSGYDLLKRVK---------------------------- 113
Query: 136 CFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
S+ +++PVV+MSSEN+ +RI CLE+GAE F++KP++LSD+++
Sbjct: 114 ----------------GSSWKDVPVVVMSSENVPSRISMCLEEGAEKFLLKPLQLSDLEK 157
Query: 196 IKDYLTRDVN 205
++ Y + ++
Sbjct: 158 LQPYFPKSLD 167
>gi|356509391|ref|XP_003523433.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 235
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 112/201 (55%), Gaps = 63/201 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE----------------- 74
VLAVDDS +DRK++ERLL SSCKVT VDSG +AL++LGL +E
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTSLESESSHPP 85
Query: 75 -QSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFIL 133
Q + +G+KV+LI+TDYCMPGM+GY+LLK++K
Sbjct: 86 PQPLQR-EGIKVNLIMTDYCMPGMSGYDLLKRVK-------------------------- 118
Query: 134 SICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
S+ +++PVVIMSSEN+ +RI CLE+GAE+F++KP++LSD+
Sbjct: 119 ------------------GSSWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLQLSDL 160
Query: 194 KRIKDYLTRDVNLGNEGRGIN 214
+++ Y + V+ E N
Sbjct: 161 DKLQPYFLKSVDNSCEKESAN 181
>gi|226499956|ref|NP_001141563.1| uncharacterized protein LOC100273679 [Zea mays]
gi|194705078|gb|ACF86623.1| unknown [Zea mays]
gi|413937888|gb|AFW72439.1| two-component response regulator ARR3 [Zea mays]
Length = 206
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 93/166 (56%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR +I +L S +VTAV+SG+RAL+ LG + V +IIT
Sbjct: 88 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEPN----------VSMIIT 137
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DYCMP MTGYELLKK+K
Sbjct: 138 DYCMPEMTGYELLKKVK------------------------------------------- 154
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAEDF+VKPV+ SDV R+
Sbjct: 155 ESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDVSRV 200
>gi|109631206|gb|ABG35779.1| SRR200 [Striga asiatica]
Length = 158
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 101/178 (56%), Gaps = 49/178 (27%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK------ 84
HVLAVDDS +DRK+IERLL SS +VT VDSG +AL+FLGL + N +
Sbjct: 11 HVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGVKALEFLGLLDNDDTNSKSVSQPRSNHI 70
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
VDLIITDY MP +TGY+LL+KIK
Sbjct: 71 VDLIITDYSMPALTGYDLLRKIK------------------------------------- 93
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+S L++IPVVIMSSENI +RI+ CLE GA++F VKPV+ SDV +++ +L R
Sbjct: 94 ------ESEILKDIPVVIMSSENIPSRINSCLEQGAQEFFVKPVQQSDVNKLRPHLMR 145
>gi|359492520|ref|XP_002284504.2| PREDICTED: two-component response regulator ARR9-like [Vitis
vinifera]
Length = 240
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 81/207 (39%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD------ 81
+ HVLAVDDS +DRK++E+LLT+SS VT V+SG +AL++LGL ++G D
Sbjct: 26 QHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGL-----LDGRDNDTTSS 80
Query: 82 --------------------------GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
GLKV+LI+TDYCMPGM+GY+LLK++K
Sbjct: 81 SSSSSSSSSSSSSSSSSSSAKPSQQEGLKVNLIMTDYCMPGMSGYDLLKRVK-------- 132
Query: 116 YSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRC 175
S+ +++PVV+MSSEN+ +RI+ C
Sbjct: 133 ------------------------------------GSSWKDVPVVVMSSENVPSRINMC 156
Query: 176 LEDGAEDFIVKPVKLSDVKRIKDYLTR 202
LE GAEDF++KPV+LSD+++++ +L +
Sbjct: 157 LEGGAEDFLLKPVQLSDLEKLQPHLLK 183
>gi|326531500|dbj|BAJ97754.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 96/170 (56%), Gaps = 55/170 (32%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL--KVD 86
E+HVLAVDDS VDR VI ++L S +VT VDS RAL+ LGL GL V+
Sbjct: 52 ELHVLAVDDSVVDRAVIAKILRSSKYRVTTVDSATRALELLGL----------GLITDVN 101
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+IITDY MPGMTGYELLK++K
Sbjct: 102 MIITDYWMPGMTGYELLKRVK--------------------------------------- 122
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS LREIPVVIMSSEN+ RI RCLE+GAEDF++KPV+ SDV R+
Sbjct: 123 ----ESSELREIPVVIMSSENVPNRITRCLEEGAEDFLLKPVRPSDVSRL 168
>gi|222629233|gb|EEE61365.1| hypothetical protein OsJ_15511 [Oryza sativa Japonica Group]
Length = 526
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 122/233 (52%), Gaps = 62/233 (26%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI +L S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEP----------NVSMIIT 65
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGYELLKK+K
Sbjct: 66 DYWMPEMTGYELLKKVK------------------------------------------- 82
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR----DVNL 206
+SS L+EIPVVIMSSEN+ RI+RCLE+GAEDF++KPV+ SDV R+ + R D N
Sbjct: 83 ESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRLCSRVLRIAYDDRNQ 142
Query: 207 GNEGRGI---NKRKARESCDLSSSPPSVITSSSSPSSPSSPFRSPSILSSSAP 256
I +K + + SS+ P + + P++P +PF P +L +++P
Sbjct: 143 KMRANDIISDSKTEFSGRDNNSSNHPKLSFKAILPTAPQTPF--PLLLRATSP 193
>gi|168043274|ref|XP_001774110.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674517|gb|EDQ61024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 131
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 102/172 (59%), Gaps = 44/172 (25%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ HVL VDDS +D++V+E+LL SS KVT V+S RAL+ LGL + S ++LI
Sbjct: 4 QYHVLTVDDSRIDQRVVEKLLMTSSFKVTTVNSALRALELLGLSD--SCPSSVKPDINLI 61
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TDYCMP MTGY+LLK++K
Sbjct: 62 MTDYCMPEMTGYDLLKRVKA---------------------------------------- 81
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
D+SAL+EIPVV+MSSEN RI+RCL +GAE+FI+KPV+++DVKR++ +L
Sbjct: 82 --DTSALKEIPVVVMSSENDSIRIERCLAEGAEEFIIKPVQMADVKRLRGHL 131
>gi|162458152|ref|NP_001104849.1| cytokinin response regulator2 [Zea mays]
gi|5689236|dbj|BAA82873.1| ZmRR2 [Zea mays]
gi|6009897|dbj|BAA85113.1| response regulator 2 [Zea mays]
Length = 157
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 102/188 (54%), Gaps = 56/188 (29%)
Query: 11 RLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG 70
+ ++ +D DL + EE HVLAVDDS VDR VI ++L S +VT VDS RAL+ L
Sbjct: 19 KAVAPPVDAVDLE-LELEEKHVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLA 77
Query: 71 LDEEQSINGFDGL--KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNL 128
L GL V++IITDY MPGMTGYELLK +K
Sbjct: 78 L----------GLVPDVNMIITDYWMPGMTGYELLKHVK--------------------- 106
Query: 129 FLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+SSALR IPVVIMSSEN+ RI RCLE+GAEDF++KPV
Sbjct: 107 ----------------------ESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPV 144
Query: 189 KLSDVKRI 196
+ +DV R+
Sbjct: 145 RPADVSRL 152
>gi|195641278|gb|ACG40107.1| two-component response regulator ARR3 [Zea mays]
Length = 136
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 93/166 (56%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR +I +L S +VTAV+SG+RAL+ LG + V +IIT
Sbjct: 18 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEP----------NVSMIIT 67
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DYCMP MTGYELLKK+K
Sbjct: 68 DYCMPEMTGYELLKKVK------------------------------------------- 84
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAEDF+VKPV+ SDV R+
Sbjct: 85 ESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDVSRV 130
>gi|242067106|ref|XP_002454842.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
gi|241934673|gb|EES07818.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
Length = 134
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 93/166 (56%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI RLL S +VT VDSG+RAL+ L LD+ V +IIT
Sbjct: 12 HVLAVDDSIVDRAVISRLLRSSKYRVTTVDSGKRALEVLSLDD----------SVHMIIT 61
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DYCMP M+GYELLK++K
Sbjct: 62 DYCMPEMSGYELLKRVK------------------------------------------- 78
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+S+ LREIPVV+MSSEN RI RCLE+GAE+F++KPV+ SDV R+
Sbjct: 79 ESAELREIPVVLMSSENSPTRIRRCLEEGAEEFLIKPVRASDVSRL 124
>gi|357142908|ref|XP_003572733.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 143
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 94/167 (56%), Gaps = 53/167 (31%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVLAVDDS VDR VI +L S +VTAVDSG+RAL+ LGL+ V +II
Sbjct: 24 LHVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGLEP----------NVSMII 73
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TDY MP MTGYELLKK+K
Sbjct: 74 TDYWMPEMTGYELLKKVK------------------------------------------ 91
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAEDF+VKPV+ SDV R+
Sbjct: 92 -ESSKLKQIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRV 137
>gi|388505720|gb|AFK40926.1| unknown [Lotus japonicus]
Length = 224
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 60/190 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE---------------Q 75
HVLAVDDS +DRK++ERLL SSCKVT VDSG +AL++LGL ++ Q
Sbjct: 23 HVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPISPQ 82
Query: 76 SINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSI 135
+ +G+KV+LI+TD+CMPG +GY+LLK++K
Sbjct: 83 QVEQ-EGIKVNLIMTDFCMPGKSGYDLLKRVK---------------------------- 113
Query: 136 CFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
S+ +++PVV+MSSEN+ +RI CLE+GAE F++KP++LSD+++
Sbjct: 114 ----------------GSSWKDVPVVVMSSENVPSRISMCLEEGAEKFLLKPLQLSDLEK 157
Query: 196 IKDYLTRDVN 205
++ Y + ++
Sbjct: 158 LQPYFPKSLD 167
>gi|357162610|ref|XP_003579464.1| PREDICTED: two-component response regulator ARR5-like [Brachypodium
distachyon]
Length = 163
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 98/172 (56%), Gaps = 55/172 (31%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL--K 84
+E+HVLAVDDS VDR VI ++L S +VT V+S RAL+ LGL GL
Sbjct: 40 VQELHVLAVDDSVVDRAVIAKILRSSKYRVTTVESATRALELLGL----------GLITN 89
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
V++IITDY MPGMTGYELLK++K
Sbjct: 90 VNMIITDYWMPGMTGYELLKRVK------------------------------------- 112
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L+EIPVVIMSSEN+ RI+RCLE+GAEDF++KPV+ SDV R+
Sbjct: 113 ------ESSELKEIPVVIMSSENVPNRINRCLEEGAEDFLLKPVRPSDVSRL 158
>gi|357164784|ref|XP_003580165.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 137
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 92/166 (55%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI +L S +VTAVDS +RAL+ LG G V +IIT
Sbjct: 19 HVLAVDDSSVDRAVITGILRSSKFRVTAVDSAKRALELLG----------SGANVSMIIT 68
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGYELLKK+K
Sbjct: 69 DYWMPDMTGYELLKKVK------------------------------------------- 85
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS LREIPVVIMSSEN+ RI+RCLE+GAEDF++KPV+ SDV R+
Sbjct: 86 ESSKLREIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRRSDVSRL 131
>gi|449464160|ref|XP_004149797.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 236
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 107/182 (58%), Gaps = 56/182 (30%)
Query: 33 LAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE------------QSINGF 80
LAVDDS +DRK++E+LLTISSC+VT V+SG +AL++LGL + ++
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
+KV+LI+TD+CMPGM+GY+LLK++K
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLK--------------------------------- 109
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
S ++IPVV+MSSEN +RI+ CLE+GAE+F++KP++LSDVK+++ +L
Sbjct: 110 -----------GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHL 158
Query: 201 TR 202
+
Sbjct: 159 QK 160
>gi|242065846|ref|XP_002454212.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
gi|241934043|gb|EES07188.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
Length = 151
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 92/166 (55%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR +I +L S +VTAV+SG+RAL+ LG + V +IIT
Sbjct: 33 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEP----------NVSMIIT 82
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGYELLKK+K
Sbjct: 83 DYWMPEMTGYELLKKVK------------------------------------------- 99
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAEDF+VKPV+ SDV R+
Sbjct: 100 ESSKLKQIPVVIMSSENVSTRISRCLEEGAEDFLVKPVRASDVSRV 145
>gi|162458935|ref|NP_001104854.1| aberrant phyllotaxy1 [Zea mays]
gi|11041692|dbj|BAB17300.1| response regulator [Zea mays]
gi|414586309|tpg|DAA36880.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 135
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 93/166 (56%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI +L S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 17 HVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLGTEP----------NVSMIIT 66
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGYELLKKIK
Sbjct: 67 DYWMPEMTGYELLKKIK------------------------------------------- 83
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L+EIPVVIMSSEN+ RI+RCLE+GAEDF++KPV+ SDV R+
Sbjct: 84 ESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPSDVSRL 129
>gi|115450024|ref|NP_001048613.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|48716336|dbj|BAD22948.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273479|emb|CAI79407.1| Type A response regulator 3 [Oryza sativa Indica Group]
gi|87116380|dbj|BAE79349.1| typeA response regulator 3 [Oryza sativa Japonica Group]
gi|113538144|dbj|BAF10527.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|118790834|tpd|FAA00265.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125541719|gb|EAY88114.1| hypothetical protein OsI_09552 [Oryza sativa Indica Group]
gi|125584256|gb|EAZ25187.1| hypothetical protein OsJ_08987 [Oryza sativa Japonica Group]
Length = 131
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 93/168 (55%), Gaps = 53/168 (31%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E HVLAVDDS VDR VI RLL S +VT VDSG+RAL+ L LD V +I
Sbjct: 10 EPHVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSLDR----------NVHMI 59
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDYCMP MTG++LLK++K
Sbjct: 60 ITDYCMPEMTGFDLLKRVK----------------------------------------- 78
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+S+ L+EIPVV+MSSEN RI RCLE+GAEDF++KPV+ SDV R+
Sbjct: 79 --ESAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLIKPVRPSDVSRL 124
>gi|242076534|ref|XP_002448203.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
gi|241939386|gb|EES12531.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
Length = 134
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 93/166 (56%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI +L S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 16 HVLAVDDSSVDRAVIAGILRSSHFRVTAVDSGKRALELLGTEP----------NVSMIIT 65
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGYELLKK+K
Sbjct: 66 DYWMPEMTGYELLKKVK------------------------------------------- 82
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L+EIPVVIMSSEN+ RI+RCLE+GAEDF++KPV+ +DV R+
Sbjct: 83 ESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPADVSRL 128
>gi|115459496|ref|NP_001053348.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|71273483|emb|CAI79409.1| Type A response regulator 5 [Oryza sativa Indica Group]
gi|87116378|dbj|BAE79348.1| typeA response regulator 5 [Oryza sativa Japonica Group]
gi|113564919|dbj|BAF15262.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|116310946|emb|CAH67883.1| OSIGBa0153E02-OSIGBa0093I20.12 [Oryza sativa Indica Group]
gi|118790846|tpd|FAA00266.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215741219|dbj|BAG97714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195239|gb|EEC77666.1| hypothetical protein OsI_16696 [Oryza sativa Indica Group]
Length = 134
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 93/166 (56%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI +L S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEP----------NVSMIIT 65
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGYELLKK+K
Sbjct: 66 DYWMPEMTGYELLKKVK------------------------------------------- 82
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L+EIPVVIMSSEN+ RI+RCLE+GAEDF++KPV+ SDV R+
Sbjct: 83 ESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRL 128
>gi|115447443|ref|NP_001047501.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|49389191|dbj|BAD26481.1| putative response regulator [Oryza sativa Japonica Group]
gi|87116382|dbj|BAE79350.1| typeA response regulator 11 [Oryza sativa Japonica Group]
gi|113537032|dbj|BAF09415.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|118790875|tpd|FAA00270.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218191220|gb|EEC73647.1| hypothetical protein OsI_08171 [Oryza sativa Indica Group]
gi|222623289|gb|EEE57421.1| hypothetical protein OsJ_07618 [Oryza sativa Japonica Group]
Length = 147
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 92/166 (55%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI +L S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 29 HVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGSEP----------NVSMIIT 78
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGYELLKK+K
Sbjct: 79 DYWMPEMTGYELLKKVK------------------------------------------- 95
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAEDF+VKPV+ SDV R+
Sbjct: 96 ESSKLKKIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRL 141
>gi|57834122|emb|CAE05717.2| OSJNBb0065J09.13 [Oryza sativa Japonica Group]
Length = 137
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 95/172 (55%), Gaps = 53/172 (30%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI +L S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEP----------NVSMIIT 65
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGYELLKK+K
Sbjct: 66 DYWMPEMTGYELLKKVK------------------------------------------- 82
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS L+EIPVVIMSSEN+ RI+RCLE+GAEDF++KPV+ SDV R+ + R
Sbjct: 83 ESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRLCSRVLR 134
>gi|413919924|gb|AFW59856.1| cytokinin response regulator2 [Zea mays]
Length = 159
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 90/166 (54%), Gaps = 51/166 (30%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI ++L S +VT VDS RAL+ L L +N +IIT
Sbjct: 40 HVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLALGLVPDVN--------MIIT 91
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MPGMTGYELLK +K
Sbjct: 92 DYWMPGMTGYELLKHVK------------------------------------------- 108
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SSALR IPVVIMSSEN+ RI RCLE+GAEDF++KPV+ +DV R+
Sbjct: 109 ESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADVSRL 154
>gi|359828774|gb|AEV76989.1| type A response regulator 5, partial [Triticum aestivum]
Length = 119
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 92/166 (55%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI +L S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 1 HVLAVDDSSVDRAVISGILRSSRFRVTAVDSGKRALELLGSEP----------NVSMIIT 50
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGYELLKK+K
Sbjct: 51 DYWMPEMTGYELLKKVK------------------------------------------- 67
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L+EIPVVIMSSEN+ RI RCLE+GAEDF++KPV+ SDV R+
Sbjct: 68 ESSKLKEIPVVIMSSENVPTRISRCLEEGAEDFLMKPVRPSDVSRL 113
>gi|357456553|ref|XP_003598557.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355487605|gb|AES68808.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|357595944|gb|AET86869.1| cytokinin resposne regulator 9 [Medicago truncatula]
Length = 164
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 110/198 (55%), Gaps = 56/198 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF-------- 80
+ HVLAVDDS +DR +IERLL SS VT VDSG +AL+FLGL E++ N
Sbjct: 3 QFHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSIAAET 62
Query: 81 -DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
++V+LIITDYCMPGMTGY+LL+KIK
Sbjct: 63 DQVVEVNLIITDYCMPGMTGYDLLRKIK-------------------------------- 90
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+S++L++IPVVIMSSEN+ + E+GAE+F +KPV+ SDV ++K +
Sbjct: 91 -----------ESNSLKDIPVVIMSSENVHQGL---TEEGAEEFFLKPVQQSDVNKLKPH 136
Query: 200 LTRDVNLGNEGRGINKRK 217
L + + NE IN ++
Sbjct: 137 LLK-TKVKNEDDLINNKR 153
>gi|90265238|emb|CAH67773.1| H0322F07.10 [Oryza sativa Indica Group]
gi|90399191|emb|CAH68178.1| H0403D02.6 [Oryza sativa Indica Group]
gi|125550193|gb|EAY96015.1| hypothetical protein OsI_17886 [Oryza sativa Indica Group]
Length = 170
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 95/170 (55%), Gaps = 55/170 (32%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL--KVD 86
E+HVLAVDDS VDR VI ++L S +VT V+S RAL+ L L GL V+
Sbjct: 49 EMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL----------GLVPNVN 98
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+IITDY MPGMTGYELLK++K
Sbjct: 99 MIITDYWMPGMTGYELLKRVK--------------------------------------- 119
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L+EIPVVIMSSEN+ RI RCLE+GAEDF++KPV+ SDV R+
Sbjct: 120 ----ESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRL 165
>gi|115461262|ref|NP_001054231.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|32488053|emb|CAE03227.1| OSJNBa0018M05.2 [Oryza sativa Japonica Group]
gi|70663953|emb|CAJ14992.1| OSJNBb0004A17.17 [Oryza sativa Japonica Group]
gi|71273485|emb|CAI79410.1| Type A response regulator 6 [Oryza sativa Indica Group]
gi|87116376|dbj|BAE79347.1| typeA response regulator 6 [Oryza sativa Japonica Group]
gi|113565802|dbj|BAF16145.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|118790854|tpd|FAA00267.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125592032|gb|EAZ32382.1| hypothetical protein OsJ_16592 [Oryza sativa Japonica Group]
gi|215765394|dbj|BAG87091.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 170
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 95/170 (55%), Gaps = 55/170 (32%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL--KVD 86
E+HVLAVDDS VDR VI ++L S +VT V+S RAL+ L L GL V+
Sbjct: 49 EMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL----------GLVPNVN 98
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+IITDY MPGMTGYELLK++K
Sbjct: 99 MIITDYWMPGMTGYELLKRVK--------------------------------------- 119
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L+EIPVVIMSSEN+ RI RCLE+GAEDF++KPV+ SDV R+
Sbjct: 120 ----ESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRL 165
>gi|260446968|emb|CBG76250.1| OO_Ba0005L10-OO_Ba0081K17.1 [Oryza officinalis]
Length = 151
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 95/170 (55%), Gaps = 55/170 (32%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL--KVD 86
E+HVLAVDDS VDR VI ++L S +VT V+S RAL+ L L GL V+
Sbjct: 30 EMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCL----------GLVPNVN 79
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+IITDY MPGMTGYELLK++K
Sbjct: 80 MIITDYWMPGMTGYELLKRVK--------------------------------------- 100
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L+EIPVVIMSSEN+ RI RCLE+GAEDF++KPV+ SDV R+
Sbjct: 101 ----ESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRL 146
>gi|296090341|emb|CBI40160.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 92/158 (58%), Gaps = 48/158 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ HVLAVDDS +DRK IE+LL SS +VT +DS +AL+FLG+ E + KV+LI
Sbjct: 8 QFHVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLGVQEAEQER-----KVNLI 62
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDY MPGMTGY+LL+KIK
Sbjct: 63 ITDYSMPGMTGYDLLRKIK----------------------------------------- 81
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVK 186
+S++L++IPVVIMSSENI +RI RCLE+GAEDF +K
Sbjct: 82 --ESTSLKDIPVVIMSSENIPSRITRCLEEGAEDFFLK 117
>gi|110617744|gb|ABG78591.1| response regulator [Oryza sativa Japonica Group]
Length = 210
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 92/166 (55%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+V+AVDDS VDR VI LL S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEP----------NVSMIIT 141
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGY+LLKKIK
Sbjct: 142 DYWMPEMTGYDLLKKIK------------------------------------------- 158
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAEDF++KPV+ +D+ RI
Sbjct: 159 ESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 204
>gi|125600088|gb|EAZ39664.1| hypothetical protein OsJ_24093 [Oryza sativa Japonica Group]
Length = 212
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 92/166 (55%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+V+AVDDS VDR VI LL S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 94 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEP----------NVSMIIT 143
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGY+LLKKIK
Sbjct: 144 DYWMPEMTGYDLLKKIK------------------------------------------- 160
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAEDF++KPV+ +D+ RI
Sbjct: 161 ESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 206
>gi|125558184|gb|EAZ03720.1| hypothetical protein OsI_25852 [Oryza sativa Indica Group]
Length = 211
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 92/166 (55%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+V+AVDDS VDR VI LL S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 93 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEP----------NVSMIIT 142
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGY+LLKKIK
Sbjct: 143 DYWMPEMTGYDLLKKIK------------------------------------------- 159
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAEDF++KPV+ +D+ RI
Sbjct: 160 ESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 205
>gi|3953605|dbj|BAA34730.1| response regulator 6 [Arabidopsis thaliana]
Length = 162
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 66/78 (84%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVLAVDDS VDRK IERLL +SSCKVT VDS RALQ+LGLD E+ GF+ LKV+LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 90 TDYCMPGMTGYELLKKIK 107
TDY MPGMTGYELLKKIK
Sbjct: 85 TDYSMPGMTGYELLKKIK 102
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Query: 163 MSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
M+ +L +I +CLE+GAEDF++KPVKLSDVKR++D L +
Sbjct: 92 MTGYELLKKI-KCLEEGAEDFLLKPVKLSDVKRLRDSLMK 130
>gi|356549441|ref|XP_003543102.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 211
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 53/179 (29%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN--------- 78
+ HVL VDDS +DRK++ERLL SSCK T VDSG +AL+FLGL ++ N
Sbjct: 16 QHFHVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKFLGLLDDDLDNSSSTSSESL 75
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
+G+KV++I+TDYCMPGM+GY+LLK+IK
Sbjct: 76 QLNGIKVNMIMTDYCMPGMSGYDLLKRIK------------------------------- 104
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
S+ +++PVVIMSSEN+ +RI CLE GAE F++KP++ SD+++++
Sbjct: 105 -------------GSSWKDVPVVIMSSENVPSRISMCLEGGAEKFLLKPLQQSDLEKLQ 150
>gi|7594516|emb|CAB88041.1| response regulator-like protein [Arabidopsis thaliana]
Length = 122
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 44/148 (29%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG-LKVD 86
EE+HVLAVDD+ +DRK++ER+L ISSCKVT ++G RAL++LGL + Q + +KV+
Sbjct: 18 EELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVN 77
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LIITDYCMPGMTG+ELLKK+K
Sbjct: 78 LIITDYCMPGMTGFELLKKVK--------------------------------------- 98
Query: 147 NLEQDSSALREIPVVIMSSENILARIDR 174
+SS L+E+PVVI+SSENI RI++
Sbjct: 99 ----ESSNLKEVPVVILSSENIPTRINK 122
>gi|224124816|ref|XP_002319429.1| type-a response regulator [Populus trichocarpa]
gi|222857805|gb|EEE95352.1| type-a response regulator [Populus trichocarpa]
Length = 131
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 99/181 (54%), Gaps = 57/181 (31%)
Query: 19 GFDLSPSDTEEVHVLAV---DDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ 75
GFD E++HVLAV DD +DRK IERLL S KVT ++ ++A+++LGL +
Sbjct: 2 GFDFD----EKLHVLAVEAVDDGLIDRKAIERLLINSEYKVTTAENKKKAIEYLGLADGH 57
Query: 76 SINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSI 135
N D LKV+LIITDYCM GMTGYELLK+IK
Sbjct: 58 HTNHGD-LKVNLIITDYCMRGMTGYELLKRIK---------------------------- 88
Query: 136 CFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
EIPVV++SSENI RI +C+E+GA++F++KP++LS V +
Sbjct: 89 ---------------------EIPVVVVSSENIPTRIKQCMEEGAQEFLLKPLQLSGVTK 127
Query: 196 I 196
+
Sbjct: 128 L 128
>gi|168064728|ref|XP_001784311.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664142|gb|EDQ50873.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 149
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 99/184 (53%), Gaps = 53/184 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ-------SINGFD 81
+ HVLAVDDS VD++VIE+LL VT VDS RAL LGL E + N F
Sbjct: 1 QYHVLAVDDSMVDQRVIEKLLKPLHA-VTTVDSAVRALDVLGLSETRPSSSKVLHFNSFV 59
Query: 82 GLK---VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
+K ++LI+TDY MP MTGY+LLK++K
Sbjct: 60 QIKKLDINLIMTDYFMPEMTGYDLLKRVKAK----------------------------- 90
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
SSAL+EIPVV+MSSEN RI RCL +GA+ F+ KPV+L+DVKR++
Sbjct: 91 -------------SSALKEIPVVLMSSENDSHRIRRCLAEGADAFLTKPVQLADVKRLRG 137
Query: 199 YLTR 202
Y+ R
Sbjct: 138 YIRR 141
>gi|168022134|ref|XP_001763595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685088|gb|EDQ71485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 146
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 101/185 (54%), Gaps = 55/185 (29%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCK---VTAVDSGRRALQFLGLDE----------EQ 75
E H+LAVDDS +D+KVIERLL +S K +T V+S RAL++LGL E +
Sbjct: 4 EYHILAVDDSRIDQKVIERLLKSASYKGTELTTVNSALRALKYLGLSESCASPVMPDVNR 63
Query: 76 SINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSI 135
+ V LI+TDYCMP MTGYELLK +K T
Sbjct: 64 ILCDLQRNAVHLIMTDYCMPEMTGYELLKIVKAET------------------------- 98
Query: 136 CFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
SA +++PV++MSSEN +RI+RCL +GAE+FI+KPV++ DV+R
Sbjct: 99 -----------------SAFKDVPVILMSSENDSSRIERCLAEGAEEFIIKPVQMKDVQR 141
Query: 196 IKDYL 200
++ ++
Sbjct: 142 LQGHI 146
>gi|357116980|ref|XP_003560254.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 172
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 94/166 (56%), Gaps = 53/166 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+V+AVDDS VDR VI LL S KVTAVDSG+RAL+ LD E +++ +IIT
Sbjct: 54 YVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEI--LDSEPNVS--------MIIT 103
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGY+LLKK+K
Sbjct: 104 DYWMPEMTGYDLLKKVK------------------------------------------- 120
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAE+F++KPV+ SD+ RI
Sbjct: 121 ESSELKQIPVVIMSSENVPTRITRCLEEGAEEFLLKPVRPSDISRI 166
>gi|115458564|ref|NP_001052882.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|87116392|dbj|BAE79355.1| typeA response regulator 1 [Oryza sativa Japonica Group]
gi|113564453|dbj|BAF14796.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|118790814|tpd|FAA00263.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215704280|dbj|BAG93120.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740726|dbj|BAG97382.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 231
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 93/171 (54%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
VL VDDS VDR+V++ LL+ S+C V AVDS ++A++FLGL EE +D+
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQA-----IDM 64
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++TDYCMP MTGYELLK IK +P
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSP------------------------------------ 88
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L+ IPV++MSSEN RI RC+ GAEDFIVKP++ DV+R+++
Sbjct: 89 -------LKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQSKDVQRLRN 132
>gi|71273475|emb|CAI79405.1| Type A response regulator 1 [Oryza sativa Indica Group]
gi|218194921|gb|EEC77348.1| hypothetical protein OsI_16028 [Oryza sativa Indica Group]
Length = 231
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 92/170 (54%), Gaps = 52/170 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
VL VDDS VDR+V++ LL+ S+C V AVDS ++A++FLGL EE +D+
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQA-----IDM 64
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++TDYCMP MTGYELLK IK +P
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSP------------------------------------ 88
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
L+ IPV++MSSEN RI RC+ GAEDFIVKP++ DV+R++
Sbjct: 89 -------LKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQSKDVQRLR 131
>gi|226532303|ref|NP_001149732.1| two-component response regulator ARR3 [Zea mays]
gi|195629894|gb|ACG36588.1| two-component response regulator ARR3 [Zea mays]
gi|195650489|gb|ACG44712.1| two-component response regulator ARR3 [Zea mays]
gi|414884446|tpg|DAA60460.1| TPA: two-component response regulator ARR3 [Zea mays]
Length = 148
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 90/165 (54%), Gaps = 53/165 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
V+AVDDS VDR ++ LL S +VTAVDSG+RAL+ LG + V +IITD
Sbjct: 30 VIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEP----------NVSMIITD 79
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
Y MP MTGY+LLKK+K +
Sbjct: 80 YWMPEMTGYDLLKKVK-------------------------------------------E 96
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
SS L+ IPVVIMSSEN+ RI RCLE+GAEDF++KPV+ SD+ RI
Sbjct: 97 SSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRI 141
>gi|255564944|ref|XP_002523465.1| receptor histidine kinase, putative [Ricinus communis]
gi|223537293|gb|EEF38924.1| receptor histidine kinase, putative [Ricinus communis]
Length = 185
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 98/171 (57%), Gaps = 44/171 (25%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ-SINGFDGLKVDLI 88
+HVLAVDD F+DRK++E+LL +S KVT+VD+G++A++ LGL +++ + ++ K+D+I
Sbjct: 19 IHVLAVDDCFLDRKIVEKLLKNASFKVTSVDNGKKAMEILGLSQDKVDKSTYNDQKIDII 78
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TDYCMP M GY+LL +K
Sbjct: 79 LTDYCMPEMNGYDLLMAVK----------------------------------------- 97
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
S ++ IPVVI+SSE RI RCL +GAEDF+ KP++ D+++++ Y
Sbjct: 98 --GHSNVKSIPVVIISSEYDPQRISRCLANGAEDFLQKPLQQKDLQKLRSY 146
>gi|222628933|gb|EEE61065.1| hypothetical protein OsJ_14923 [Oryza sativa Japonica Group]
Length = 231
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 94/174 (54%), Gaps = 58/174 (33%)
Query: 32 VLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDE---EQSINGFDGLK 84
VL VDDS VDR+V++ LL+ S+C V AVDS ++AL FLGL E EQ+I
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKALGFLGLKEKGKEQAI------- 62
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
D+++TDYCMP MTGYELLK IK +P
Sbjct: 63 -DMVLTDYCMPEMTGYELLKAIKALSP--------------------------------- 88
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L+ IPV++MSSEN RI RC+ GAEDFIVKP++ DV+R+++
Sbjct: 89 ----------LKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQSKDVQRLRN 132
>gi|224034623|gb|ACN36387.1| unknown [Zea mays]
gi|413918403|gb|AFW58335.1| RR1-Corn type-A response regulator [Zea mays]
Length = 232
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 91/173 (52%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ VL VDDS VDR+V + LL+ SC V AVDS R+A++FLGL +G + V
Sbjct: 14 MRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLK-----DGGEEQAV 68
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+++TDYCMP MTGY+LLK IK P
Sbjct: 69 DMVLTDYCMPEMTGYDLLKAIKALNP---------------------------------- 94
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L IPVV+MSSE+ RI RCL GAEDFIVKP++ DV+R+++
Sbjct: 95 ---------LEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDVQRLRN 138
>gi|195656043|gb|ACG47489.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 232
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 91/173 (52%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ VL VDDS VDR+V + LL+ SC V AVDS R+A++FLGL +G + V
Sbjct: 14 MRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLK-----DGGEEQAV 68
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+++TDYCMP MTGY+LLK IK P
Sbjct: 69 DMVLTDYCMPEMTGYDLLKAIKALNP---------------------------------- 94
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L IPVV+MSSE+ RI RCL GAEDFIVKP++ DV+R+++
Sbjct: 95 ---------LEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDVQRLRN 138
>gi|242074746|ref|XP_002447309.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
gi|241938492|gb|EES11637.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
Length = 170
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 90/166 (54%), Gaps = 51/166 (30%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI ++L S +VT V+S RAL+ L L +N +IIT
Sbjct: 51 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLALGLLPDVN--------MIIT 102
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MPGMTGYELLK +K
Sbjct: 103 DYWMPGMTGYELLKHVK------------------------------------------- 119
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS LREIPVVIMSSEN+ RI RCLE+GAEDF++KPV+ SDV R+
Sbjct: 120 ESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDVSRL 165
>gi|449457395|ref|XP_004146434.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
gi|449526784|ref|XP_004170393.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
Length = 162
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 102/175 (58%), Gaps = 51/175 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG-LDEEQSINGFD-------G 82
HVLAVDD+ VDRK++E+LL SSCKVT ++G AL+FLG LDE F+
Sbjct: 26 HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQQR 85
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
KV++IITDYCMPGM+GYELLKKIK
Sbjct: 86 SKVNMIITDYCMPGMSGYELLKKIK----------------------------------- 110
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
SS ++E+PVV++SSEN+ RI++CLE+GAE F++KP+K SDV ++K
Sbjct: 111 --------RSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLK 157
>gi|242043834|ref|XP_002459788.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
gi|241923165|gb|EER96309.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
Length = 168
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 90/165 (54%), Gaps = 53/165 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
V+AVDD VDR ++ LL S +VTAVDSG+RAL+ LG + V +IITD
Sbjct: 50 VIAVDDCSVDRALVTALLRRSKYRVTAVDSGKRALEILGSEP----------NVSMIITD 99
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
Y MP MTGY+LLKK+K +
Sbjct: 100 YWMPEMTGYDLLKKVK-------------------------------------------E 116
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
SS L++IPVVIMSSEN+ RI RCLE+GAEDF++KPV+ SD+ RI
Sbjct: 117 SSKLKQIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRI 161
>gi|195651747|gb|ACG45341.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 238
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 110/224 (49%), Gaps = 63/224 (28%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ VL VDDS VDR+V + LL+ +SC V AVDS ++A++FLGL + G +
Sbjct: 12 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKD-----GGKEQAI 66
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+++TDYCMP MTGY+LLK IK P
Sbjct: 67 DMVLTDYCMPEMTGYDLLKAIKALNP---------------------------------- 92
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVN 205
L+ IPV++MSSE+ RI RCL GAEDFIVKP++ DV+R++ N
Sbjct: 93 ---------LKPIPVIVMSSEDEPQRISRCLNAGAEDFIVKPLQSKDVQRLR-------N 136
Query: 206 LGNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSSPFRSPS 249
R NK A C+ + +V S++ PS+ SPS
Sbjct: 137 CSTAARPSNKGGATLPCEEN----AVAKWSNNKLPPSAGATSPS 176
>gi|219363715|ref|NP_001137062.1| uncharacterized protein LOC100217235 [Zea mays]
gi|194698206|gb|ACF83187.1| unknown [Zea mays]
gi|224029529|gb|ACN33840.1| unknown [Zea mays]
gi|414587101|tpg|DAA37672.1| TPA: RR1-Corn type-A response regulator [Zea mays]
Length = 244
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 99/198 (50%), Gaps = 59/198 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ VL VDDS VDR+V + LL+ +SC V AVDS ++A++FLGL + G +
Sbjct: 12 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKD-----GGKEQAI 66
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+++TDYCMP MTGY+LLK IK P
Sbjct: 67 DMVLTDYCMPEMTGYDLLKAIKALNP---------------------------------- 92
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVN 205
L+ IPV++MSSE+ RI RCL GAEDFIVKP++ DV+R++ N
Sbjct: 93 ---------LKPIPVIVMSSEDEPQRISRCLNAGAEDFIVKPLQSKDVQRLR-------N 136
Query: 206 LGNEGRGINKRKARESCD 223
GR NK A C+
Sbjct: 137 CSTVGRPSNKGGATLPCE 154
>gi|226497480|ref|NP_001147402.1| RR6 - Corn type-A response regulator [Zea mays]
gi|223946411|gb|ACN27289.1| unknown [Zea mays]
gi|414584832|tpg|DAA35403.1| TPA: response regulatorResponse regulator 1 [Zea mays]
Length = 156
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 92/168 (54%), Gaps = 51/168 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E HVLAVDDS VDR VI R+L S KVTAV+S RAL+ L L ++ +I
Sbjct: 35 EKHVLAVDDSSVDRAVIARILRGSRYKVTAVESATRALELLALGLLPDVS--------MI 86
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDY MPGMTGYELLK++K
Sbjct: 87 ITDYWMPGMTGYELLKRVK----------------------------------------- 105
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+S+ALR IPVVIMSSEN+ RI RCLE+GAE F++KPV+ +DV R+
Sbjct: 106 --ESAALRGIPVVIMSSENVSTRITRCLEEGAEGFLLKPVRPADVSRL 151
>gi|260765421|gb|ACX49754.1| cytokinin response regulator 11 [Zea mays]
Length = 156
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 92/168 (54%), Gaps = 51/168 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E HVLAVDDS VDR VI R+L S KVTAV+S RAL+ L L ++ +I
Sbjct: 35 EKHVLAVDDSSVDRTVIARILRGSRYKVTAVESATRALELLALGLLPDVS--------MI 86
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDY MPGMTGYELLK++K
Sbjct: 87 ITDYWMPGMTGYELLKRVK----------------------------------------- 105
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+S+ALR IPVVIMSSEN+ RI RCLE+GAE F++KPV+ +DV R+
Sbjct: 106 --ESAALRGIPVVIMSSENVSTRITRCLEEGAEGFLLKPVRPADVSRL 151
>gi|242073184|ref|XP_002446528.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
gi|241937711|gb|EES10856.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
Length = 249
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 92/173 (53%), Gaps = 51/173 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ VL VDDS VDR+V + LL+ +SC V AVDS ++A++FLGL + G +
Sbjct: 14 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKD----GGGKEQAI 69
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+++TDYCMP MTGY+LLK IK P
Sbjct: 70 DMVLTDYCMPEMTGYDLLKAIKALNP---------------------------------- 95
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L+ IPV++MSSE+ RI RCL GAEDFIVKP++ DV+R+++
Sbjct: 96 ---------LKPIPVIVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDVQRLRN 139
>gi|357163783|ref|XP_003579845.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 224
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 92/171 (53%), Gaps = 52/171 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ VL VDDS VDRKV+E +L S+C V AVDS ++A++FLGL +G + +
Sbjct: 10 MRVLLVDDSPVDRKVVELVLGSSACAGSFHVIAVDSAKKAMEFLGLK-----DGKEQQDI 64
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+++TDYCMP MTGY+LLK IK +P
Sbjct: 65 DMVLTDYCMPEMTGYDLLKAIKALSP---------------------------------- 90
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
L+ IPV++MSSEN RI RCL+ GAED+IVKP++ DV R+
Sbjct: 91 ---------LKPIPVIVMSSENEPQRISRCLKAGAEDYIVKPLRSKDVPRL 132
>gi|255545370|ref|XP_002513745.1| Two-component response regulator ARR9, putative [Ricinus communis]
gi|223546831|gb|EEF48328.1| Two-component response regulator ARR9, putative [Ricinus communis]
Length = 229
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 102/199 (51%), Gaps = 79/199 (39%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL--DEEQSING--------- 79
HVLAVDDS +DRK++ERLL +SS +VT VDSG +AL++LGL + E +
Sbjct: 41 HVLAVDDSLLDRKLLERLLRVSSYQVTCVDSGDKALEYLGLLNNLENATTASSSSSSFSQ 100
Query: 80 -------------FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQ 126
+G+KV+LI+TDYCMPGM+GY+LLK++K
Sbjct: 101 SAPPPPPPQQQQQQEGMKVNLIMTDYCMPGMSGYDLLKRVK------------------- 141
Query: 127 NLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVK 186
S +++PVV+M CLE GAE+F++K
Sbjct: 142 -------------------------GSPWKDVPVVVM-----------CLEGGAEEFLLK 165
Query: 187 PVKLSDVKRIKDYLTRDVN 205
PV+LSDV++++ +L + ++
Sbjct: 166 PVQLSDVEKLQTHLLKSLD 184
>gi|22831009|dbj|BAC15873.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273487|emb|CAI79411.1| Type A response regulator 7 [Oryza sativa Indica Group]
gi|87116384|dbj|BAE79351.1| typeA response regulator 7 [Oryza sativa Japonica Group]
gi|118790860|tpd|FAA00268.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 206
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 88/166 (53%), Gaps = 57/166 (34%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+V+AVDDS VDR VI LL S + DSG+RAL+ LG + V +IIT
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILGSEP----------NVSMIIT 137
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DY MP MTGY+LLKKIK
Sbjct: 138 DYWMPEMTGYDLLKKIK------------------------------------------- 154
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+SS L++IPVVIMSSEN+ RI RCLE+GAEDF++KPV+ +D+ RI
Sbjct: 155 ESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 200
>gi|195651177|gb|ACG45056.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 233
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 90/171 (52%), Gaps = 50/171 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVT--AVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+ VL VDDS VDR+V + LL+ SC + +DS R+A++FLGL +G + VD+
Sbjct: 14 MRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIDSARKAMEFLGLK-----DGGEEQAVDI 68
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++TDYCMP MTGY+LLK IK P
Sbjct: 69 VLTDYCMPEMTGYDLLKAIKALNP------------------------------------ 92
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L IPVV+MSSE+ RI RCL GAEDFIVKP++ DV+R+++
Sbjct: 93 -------LEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDVQRLRN 136
>gi|449526812|ref|XP_004170407.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 194
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 87/162 (53%), Gaps = 58/162 (35%)
Query: 56 VTAVDSGRRALQFLGLDEEQS---------------INGFDGLKVDLIITDYCMPGMTGY 100
VT VDSG +AL+FLGL +E N ++V+LIITDYCMPGMTG+
Sbjct: 3 VTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFSSPNNHHQEVEVNLIITDYCMPGMTGF 62
Query: 101 ELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPV 160
+LLKK+K +S++LR IPV
Sbjct: 63 DLLKKVK-------------------------------------------ESTSLRNIPV 79
Query: 161 VIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
VIMSSEN+ +RI+RCLE+GAE+F +KPV+L DV ++K ++ +
Sbjct: 80 VIMSSENVPSRINRCLEEGAEEFFLKPVRLCDVNKLKPHMMK 121
>gi|357149551|ref|XP_003575151.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 226
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 94/174 (54%), Gaps = 47/174 (27%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTI---SSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
E++ VL VDDS VDRK+++ LL S+ VT VDSG++A++ LG + Q+
Sbjct: 11 EKLRVLVVDDSPVDRKIVQLLLNNHRGSAFHVTVVDSGKKAMELLG-QKPQAQEEQQRRS 69
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
+D+++TDYCMP MTGY+LLK IK LN N
Sbjct: 70 IDIVLTDYCMPEMTGYDLLKAIKA--------------LNSPN----------------- 98
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
IPVV+MSSEN RI+RCL GAEDFIVKP++ DV+R+++
Sbjct: 99 ------------PIPVVVMSSENEPQRINRCLTAGAEDFIVKPLRTKDVQRLRN 140
>gi|242075916|ref|XP_002447894.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
gi|241939077|gb|EES12222.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
Length = 194
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 92/173 (53%), Gaps = 51/173 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ VL VDDS VDR+V + LL+ +SC V AVDS ++A++FLGL + G +
Sbjct: 14 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKD----GGGKEQTI 69
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+++TDYCMP MTGY+LL+ IK P
Sbjct: 70 DMVLTDYCMPEMTGYDLLRAIKALNP---------------------------------- 95
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L+ IPV++MSSE+ RI RCL GAED+IVKP++ DV+R+++
Sbjct: 96 ---------LKPIPVIVMSSEDEPQRISRCLNAGAEDYIVKPLQSKDVQRLRN 139
>gi|195611056|gb|ACG27358.1| RR6 - Corn type-A response regulator [Zea mays]
Length = 156
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 91/168 (54%), Gaps = 51/168 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E HVLAVDDS VDR VI R+L S KVTAV+S RAL+ L L ++ +I
Sbjct: 35 EKHVLAVDDSSVDRAVIARILRGSRYKVTAVESATRALELLALGLLPDVS--------MI 86
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDY MPGMTGYELLK++K
Sbjct: 87 ITDYWMPGMTGYELLKRVK----------------------------------------- 105
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+S+ALR IPVVIMSSEN+ RI R LE+GAE F++KPV+ +DV R+
Sbjct: 106 --ESAALRGIPVVIMSSENVSTRITRYLEEGAEGFLLKPVRPADVSRL 151
>gi|162463265|ref|NP_001104838.1| cytokinin response regulator1 [Zea mays]
gi|4512216|dbj|BAA75253.1| response regulator [Zea mays]
gi|6009895|dbj|BAA85112.1| response regulator 1 [Zea mays]
Length = 157
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 91/168 (54%), Gaps = 51/168 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E HVLAVDDS VDR VI R+L S +VTAV+S RAL+ L L ++ +I
Sbjct: 36 EKHVLAVDDSSVDRAVIARILRGSRYRVTAVESATRALELLALGLLPDVS--------MI 87
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDY MPGMTGYELLK +K
Sbjct: 88 ITDYWMPGMTGYELLKCVK----------------------------------------- 106
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+S+ALR IPVVIMSSEN+ RI RCLE+GAE F++KPV+ +DV R+
Sbjct: 107 --ESAALRGIPVVIMSSENVPTRITRCLEEGAEGFLLKPVRPADVSRL 152
>gi|359828770|gb|AEV76987.1| type A response regulator 1, partial [Triticum aestivum]
Length = 209
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 91/172 (52%), Gaps = 57/172 (33%)
Query: 32 VLAVDDSFVDRKVIERLLT----ISSCKVTAVDSGRRALQFLGLDE--EQSINGFDGLKV 85
VL VDDS VDRKV+E +L S V AVDS ++A++FLGL + EQ+ V
Sbjct: 5 VLLVDDSPVDRKVVELVLGSNTFAGSFHVVAVDSAKKAMEFLGLKDGKEQA--------V 56
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+++TDYCMP MTGY+LLK IK +P
Sbjct: 57 DMVLTDYCMPEMTGYDLLKAIKAMSP---------------------------------- 82
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
L+ IPV++MSSEN RI RCL+ GAED+IVKP++ DV R++
Sbjct: 83 ---------LKPIPVIVMSSENEPQRISRCLKAGAEDYIVKPLQSKDVPRLR 125
>gi|242049694|ref|XP_002462591.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
gi|241925968|gb|EER99112.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
Length = 123
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 93/175 (53%), Gaps = 53/175 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
DT HVL VDD+FVDR V R+L + +VT V+ ++AL+FL ++ + V
Sbjct: 2 DTVAPHVLIVDDTFVDRLVASRVLKNCNIQVTIVEGPKQALEFLDVEND----------V 51
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LI+TDYCMPGMTGY+LL ++K
Sbjct: 52 NLILTDYCMPGMTGYDLLLEVK-------------------------------------- 73
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+S L+ IPVVIMSS+NI R+ +CL+ GA+++I+KP+K DV RI Y+
Sbjct: 74 -----ESPKLKHIPVVIMSSDNIPERMQKCLDAGAKEYIIKPIKAVDVPRILSYI 123
>gi|162459462|ref|NP_001104858.1| response regulator 7 [Zea mays]
gi|12060390|dbj|BAB20582.1| response regulator 7 [Zea mays]
Length = 242
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 92/181 (50%), Gaps = 55/181 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCK-------VTAVDSGRRALQFLGLDEEQS-----I 77
V VL VDDS VDRKV+E LL + + VTAVDSG++A++ L L E+
Sbjct: 13 VRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCA 72
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
+ + +D+++TDYCMP MTGY+LLK IK + N
Sbjct: 73 ADANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPN------------------------ 108
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
IPVV+MSSEN RI RCL GAEDFI+KP+K DV+R++
Sbjct: 109 -------------------PIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLR 149
Query: 198 D 198
+
Sbjct: 150 N 150
>gi|194697208|gb|ACF82688.1| unknown [Zea mays]
gi|413922696|gb|AFW62628.1| response regulator 7 [Zea mays]
Length = 242
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 92/181 (50%), Gaps = 55/181 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCK-------VTAVDSGRRALQFLGLDEEQS-----I 77
V VL VDDS VDRKV+E LL + + VTAVDSG++A++ L L E+
Sbjct: 13 VRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCA 72
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
+ + +D+++TDYCMP MTGY+LLK IK + N
Sbjct: 73 ADANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPN------------------------ 108
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
IPVV+MSSEN RI RCL GAEDFI+KP+K DV+R++
Sbjct: 109 -------------------PIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLR 149
Query: 198 D 198
+
Sbjct: 150 N 150
>gi|414878657|tpg|DAA55788.1| TPA: hypothetical protein ZEAMMB73_373156 [Zea mays]
Length = 123
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 82/159 (51%), Gaps = 47/159 (29%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE----QSING 79
P HVLAVDDS VDRK+IE LL SS +VT VDSG +AL+ LGL + S
Sbjct: 4 PDAESRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPD 63
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+ V+LIITDYCMPGMTGY+LLK++K
Sbjct: 64 HQEIDVNLIITDYCMPGMTGYDLLKRVK-------------------------------- 91
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLED 178
SS+L++IPVVIMSSEN+ ARI R D
Sbjct: 92 -----------GSSSLKDIPVVIMSSENVPARISRSAPD 119
>gi|242061964|ref|XP_002452271.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
gi|241932102|gb|EES05247.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
Length = 168
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 90/172 (52%), Gaps = 52/172 (30%)
Query: 36 DDSFVDRKVIERLLT-----ISSCKVTAVDSGRRALQFLGLDEEQSING----FDGLKVD 86
DDS +DRKV+E LL + VTAVDSG++A++ L L E+ S++ + L VD
Sbjct: 21 DDSPIDRKVVELLLRNHKGGAAPFHVTAVDSGKKAMEHLRLMEQDSLDSSAAHANELTVD 80
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+++TDYCMP MTGY+LLK IK
Sbjct: 81 IVLTDYCMPEMTGYDLLKAIKAL------------------------------------- 103
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
S+ IPVV+MSSEN RI RCL GAEDFI+KP+K DV+R+++
Sbjct: 104 ------SSPTPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLRN 149
>gi|414870674|tpg|DAA49231.1| TPA: hypothetical protein ZEAMMB73_704016 [Zea mays]
Length = 123
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 53/175 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
DT HVL VDD+FVDR V R+L + +VT V+ ++AL FL ++ + V
Sbjct: 2 DTIGPHVLIVDDTFVDRLVASRVLKTCNIQVTMVEGPKQALDFLDVEND----------V 51
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+LI+TDYCMPGMTGY+LL ++K
Sbjct: 52 NLILTDYCMPGMTGYDLLMEVK-------------------------------------- 73
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+S L+ IPVV+MSS++I R+ +C++ GA+++I+KP+K DV RI Y+
Sbjct: 74 -----ESPKLKHIPVVVMSSDHIPQRMQKCMDAGAKEYIIKPIKAIDVPRILSYI 123
>gi|242081261|ref|XP_002445399.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
gi|241941749|gb|EES14894.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
Length = 123
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 88/170 (51%), Gaps = 53/170 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDD+FVDR V R+L + +VT V+ ++AL FL ++ + V LI+T
Sbjct: 7 HVLIVDDTFVDRLVASRVLKSCNIQVTIVEGPKQALDFLDVEND----------VKLILT 56
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DYCMPGMTGY+LL ++K
Sbjct: 57 DYCMPGMTGYDLLMEVK------------------------------------------- 73
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+S L IPVVIMSS+NI RI +CL A+++I+KP+K++DV RI Y+
Sbjct: 74 ESPKLNHIPVVIMSSDNIPERIQKCLAARAKEYIIKPIKVADVHRIFSYI 123
>gi|302141801|emb|CBI19004.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+ HVLAVDDS +DRK++E+LLT+SS VT V+SG +AL++LGL DG D
Sbjct: 16 QHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGL--------LDGRDNDT 67
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
+ + + + +Q L + ++ +C P +
Sbjct: 68 TSSSSSSSSSSSSSSSSSSSSSAKPSQQ--------EMQGLKVNLIMTDYCMPGMSGYDL 119
Query: 148 LEQ-DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L++ S+ +++PVV+MSSEN+ +RI+ CLE GAEDF++KPV+LSD+++++ +L +
Sbjct: 120 LKRVKGSSWKDVPVVVMSSENVPSRINMCLEGGAEDFLLKPVQLSDLEKLQPHLLK 175
>gi|46390908|dbj|BAD16423.1| putative response regulator 7 [Oryza sativa Japonica Group]
gi|71273477|emb|CAI79406.1| Type A response regulator 2 [Oryza sativa Indica Group]
gi|87116394|dbj|BAE79356.1| typeA response regulator 2 [Oryza sativa Japonica Group]
gi|118790824|tpd|FAA00264.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215697882|dbj|BAG92075.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 252
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 93/195 (47%), Gaps = 68/195 (34%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSC--------------KVTAVDSGRRALQFLGL- 71
E V VL VDDS VDR+V+E LL + C VTAVDSG++A++ LG
Sbjct: 3 AEAVRVLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRR 61
Query: 72 --DEEQ-------SINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D + + + +D+++TDYCMP MTGY+LLK IK N
Sbjct: 62 RGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPN--------- 112
Query: 123 LNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAED 182
IPVV+MSSEN RI RCL GAED
Sbjct: 113 ----------------------------------PIPVVVMSSENEPQRISRCLTAGAED 138
Query: 183 FIVKPVKLSDVKRIK 197
FI+KP+K++DV+R++
Sbjct: 139 FILKPLKMNDVQRLR 153
>gi|297599428|ref|NP_001047142.2| Os02g0557800 [Oryza sativa Japonica Group]
gi|255671003|dbj|BAF09056.2| Os02g0557800, partial [Oryza sativa Japonica Group]
Length = 306
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 93/195 (47%), Gaps = 68/195 (34%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSC--------------KVTAVDSGRRALQFLGL- 71
E V VL VDDS VDR+V+E LL + C VTAVDSG++A++ LG
Sbjct: 57 AEAVRVLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRR 115
Query: 72 --DEEQ-------SINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D + + + +D+++TDYCMP MTGY+LLK IK N
Sbjct: 116 RGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPN--------- 166
Query: 123 LNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAED 182
IPVV+MSSEN RI RCL GAED
Sbjct: 167 ----------------------------------PIPVVVMSSENEPQRISRCLTAGAED 192
Query: 183 FIVKPVKLSDVKRIK 197
FI+KP+K++DV+R++
Sbjct: 193 FILKPLKMNDVQRLR 207
>gi|37956247|gb|AAP32005.1| putative two-component system response regulator [Populus tremula x
Populus alba]
Length = 74
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 62/107 (57%), Gaps = 43/107 (40%)
Query: 93 CMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDS 152
CMPGMTGYELLKKIK +S
Sbjct: 1 CMPGMTGYELLKKIK-------------------------------------------ES 17
Query: 153 SALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
S+ REIPVVIMSSEN++ARIDRCLE+GAE+FI KPVKLSDVKR++DY
Sbjct: 18 SSFREIPVVIMSSENVMARIDRCLEEGAEEFIAKPVKLSDVKRLRDY 64
>gi|125539898|gb|EAY86293.1| hypothetical protein OsI_07664 [Oryza sativa Indica Group]
Length = 205
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 93/195 (47%), Gaps = 68/195 (34%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSC--------------KVTAVDSGRRALQFLGL- 71
E V VL VDDS VDR+V+E LL + C VTAVDSG++A++ LG
Sbjct: 3 AEAVRVLVVDDSPVDRRVVELLLR-AHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRR 61
Query: 72 --DEEQ-------SINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D + + + +D+++TDYCMP MTGY+LLK IK N
Sbjct: 62 RGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPN--------- 112
Query: 123 LNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAED 182
IPVV+MSSEN RI RCL GAED
Sbjct: 113 ----------------------------------PIPVVVMSSENEPQRISRCLTAGAED 138
Query: 183 FIVKPVKLSDVKRIK 197
FI+KP+K++DV+R++
Sbjct: 139 FILKPLKMNDVQRLR 153
>gi|27260981|dbj|BAC45098.1| putative response regulator [Oryza sativa Japonica Group]
gi|40253364|dbj|BAD05296.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273489|emb|CAI79412.1| Type A response regulator 8 [Oryza sativa Indica Group]
gi|87116396|dbj|BAE79357.1| typeA response regulator 8 [Oryza sativa Japonica Group]
gi|118790867|tpd|FAA00269.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 84/170 (49%), Gaps = 53/170 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDD+ VDR V+ L + +VTAV+S +AL FL D E VD+I++
Sbjct: 5 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL--DSEHD--------VDMIVS 54
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DYCMP MTGY LL ++K
Sbjct: 55 DYCMPDMTGYNLLMEVK------------------------------------------- 71
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
S L +PVVI SS+NI RI +CL+ GA+D+I+KPVK+ DV RI Y+
Sbjct: 72 KSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDVPRIMKYI 121
>gi|125561361|gb|EAZ06809.1| hypothetical protein OsI_29053 [Oryza sativa Indica Group]
Length = 185
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 84/170 (49%), Gaps = 53/170 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDD+ VDR V+ L + +VTAV+S +AL FL D E VD+I++
Sbjct: 69 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL--DSEHD--------VDMIVS 118
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DYCMP MTGY LL ++K
Sbjct: 119 DYCMPDMTGYNLLMEVK------------------------------------------- 135
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
S L +PVVI S+NI RI +CL+ GA+D+I+KPVK+ DV RI +Y+
Sbjct: 136 KSPTLAHLPVVIAFSDNIPERIRKCLDGGAKDYILKPVKIVDVPRIMNYI 185
>gi|87116398|dbj|BAE79358.1| typeA response regulator 12 [Oryza sativa Japonica Group]
gi|118790879|tpd|FAA00271.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 86/170 (50%), Gaps = 53/170 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDD+ VDR V+ L + +VTAV+S +AL F LD E +N +I++
Sbjct: 5 HVLVVDDTLVDRHVVSMALMRHNVRVTAVESVMQALMF--LDSEHDVN--------MIVS 54
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DYCMP MTGY+LL ++K
Sbjct: 55 DYCMPDMTGYDLLMEVK------------------------------------------- 71
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
S L +PVVI SS+NI RI +CL+ GA+D+I+KPVK+ D+ RI +Y+
Sbjct: 72 KSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDLPRILNYI 121
>gi|413951288|gb|AFW83937.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 127
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 80/160 (50%), Gaps = 59/160 (36%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING----------- 79
HVLAVDDS +DRK+IE LL SS +VT VDSG +AL+ LGL + + +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSSSSSSS 70
Query: 80 -----FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILS 134
+ V LIITDYCMPGMTGY+LLK++K
Sbjct: 71 SSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVK--------------------------- 103
Query: 135 ICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDR 174
SS+L++IPVVIMSSEN+ ARI R
Sbjct: 104 ----------------GSSSLKDIPVVIMSSENVPARISR 127
>gi|357463579|ref|XP_003602071.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355491119|gb|AES72322.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 128
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 20/109 (18%)
Query: 20 FDLSPSD--TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE--- 74
L P + E HVLAVDDS +DR ++ERLL SSCKVT VDSG +AL++LGL+ +
Sbjct: 10 LQLQPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEIS 69
Query: 75 ---------------QSINGFDGLKVDLIITDYCMPGMTGYELLKKIKV 108
Q + +G KV+LI+TDYCMPGM+GY+LLK++KV
Sbjct: 70 STKSSILESSSPSLPQPLQLQEGNKVNLIMTDYCMPGMSGYDLLKRVKV 118
>gi|87116400|dbj|BAE79359.1| typeA response regulator 13 [Oryza sativa Japonica Group]
Length = 121
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 86/170 (50%), Gaps = 53/170 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDD+ VDR VI L + +VTAV+S +AL F LD E +N +I++
Sbjct: 5 HVLVVDDTHVDRHVISMALMRHNVRVTAVESVMQALVF--LDSEHDVN--------MIVS 54
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
DYCMP MTGY+LL ++K
Sbjct: 55 DYCMPEMTGYDLLMEVK------------------------------------------- 71
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
S L +PV+I SS+NI RI +C + GA+D+I+KPVK++DV RI +Y+
Sbjct: 72 KSPRLVHLPVIIASSDNIPERIRKCFDGGAKDYILKPVKIADVPRILNYI 121
>gi|357138640|ref|XP_003570898.1| PREDICTED: two-component response regulator ARR8-like [Brachypodium
distachyon]
Length = 133
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 87/178 (48%), Gaps = 53/178 (29%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
P T HVL VDD+ DR V+ LL S +VTAV+ + AL+F LD + +N
Sbjct: 9 EPEGTRRPHVLVVDDTRGDRLVLTYLLQRSHVRVTAVEGVKEALEF--LDSQNDVN---- 62
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
+I++DYCMP M GY+LL ++K + P
Sbjct: 63 ----MIVSDYCMPEMNGYDLLMEVKNSPP------------------------------- 87
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
L IPVVI SS+NI RI +CL+ GA+++IVKPV++ DV RI Y+
Sbjct: 88 ------------LAHIPVVIASSDNIPERIQKCLDGGAKEYIVKPVQIPDVLRILRYI 133
>gi|226492361|ref|NP_001146526.1| uncharacterized protein LOC100280118 [Zea mays]
gi|219887677|gb|ACL54213.1| unknown [Zea mays]
Length = 127
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 79/160 (49%), Gaps = 59/160 (36%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING----------- 79
HVLAVDDS +DRK+IE LL SS +VT VDSG +AL+ LG + + +
Sbjct: 11 HVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGPRDNGAEDASPPSSSSSSSS 70
Query: 80 -----FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILS 134
+ V LIITDYCMPGMTGY+LLK++K
Sbjct: 71 SSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVK--------------------------- 103
Query: 135 ICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDR 174
SS+L++IPVVIMSSEN+ ARI R
Sbjct: 104 ----------------GSSSLKDIPVVIMSSENVPARISR 127
>gi|226875187|gb|ACO88941.1| cytokinin A-type response regulator 1 [Vitis vinifera]
Length = 65
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 50/54 (92%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRD 203
++SS RE PVVIMSSENIL RIDRCLE+GAEDFIVKPVKLSDVKR+KDY+TR+
Sbjct: 7 KESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTRE 60
>gi|449529439|ref|XP_004171707.1| PREDICTED: two-component response regulator ARR8-like, partial
[Cucumis sativus]
Length = 109
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 64/87 (73%), Gaps = 12/87 (13%)
Query: 33 LAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE------------QSINGF 80
LAVDDS +DRK++E+LLTISSC+VT V+SG +AL++LGL + ++
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIK 107
+KV+LI+TD+CMPGM+GY+LLK++K
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLK 109
>gi|32479678|emb|CAE02513.1| P0076O17.11 [Oryza sativa Japonica Group]
Length = 108
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 73/148 (49%), Gaps = 52/148 (35%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSC----KVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
VL VDDS VDR+V++ LL+ S+C V AVDS ++A++FLGL EE +D
Sbjct: 9 RVLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQA-----ID 63
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+++TDYCMP MTGYELLK IK +P
Sbjct: 64 MVLTDYCMPEMTGYELLKAIKALSP----------------------------------- 88
Query: 147 NLEQDSSALREIPVVIMSSENILARIDR 174
L+ IPV++MSSEN RI R
Sbjct: 89 --------LKPIPVIVMSSENEPQRISR 108
>gi|94966174|emb|CAJ29968.1| response regulator [Zea mays]
gi|413922105|gb|AFW62037.1| response regulator [Zea mays]
Length = 124
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 80/174 (45%), Gaps = 52/174 (29%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
T+ HVL VD S VD V +L + +VT AL+FL + VD
Sbjct: 3 TQSPHVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFLDANNSH---------VD 53
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LI+TDYCMP MTGY+LL+++K
Sbjct: 54 LILTDYCMPDMTGYDLLREVK--------------------------------------- 74
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+S L+ IPVVI ++ I RI C E GAE++++KP+K+SDV RI Y+
Sbjct: 75 ----ESPRLKHIPVVITCTDVIPERIIECFEGGAEEYMIKPLKVSDVPRILSYM 124
>gi|414586308|tpg|DAA36879.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 148
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 52/78 (66%), Gaps = 10/78 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS VDR VI +L S +VTAVDSG+RAL+ LG + V +IIT
Sbjct: 17 HVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLGTEP----------NVSMIIT 66
Query: 91 DYCMPGMTGYELLKKIKV 108
DY MP MTGYELLKKIK
Sbjct: 67 DYWMPEMTGYELLKKIKA 84
>gi|223942921|gb|ACN25544.1| unknown [Zea mays]
gi|413918402|gb|AFW58334.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 179
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 48/133 (36%)
Query: 66 LQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNL 125
++FLGL +G + VD+++TDYCMP MTGY+LLK IK P
Sbjct: 1 MEFLGLK-----DGGEEQAVDMVLTDYCMPEMTGYDLLKAIKALNP-------------- 41
Query: 126 QNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIV 185
L IPVV+MSSE+ RI RCL GAEDFIV
Sbjct: 42 -----------------------------LEPIPVVVMSSEDEPQRISRCLSAGAEDFIV 72
Query: 186 KPVKLSDVKRIKD 198
KP++ DV+R+++
Sbjct: 73 KPLQSKDVQRLRN 85
>gi|94966176|emb|CAJ29969.1| response regulator [Zea mays]
Length = 124
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 79/174 (45%), Gaps = 52/174 (29%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
T+ HVL VD S VD V +L + +VT AL+FL + VD
Sbjct: 3 TQSPHVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFLDANNSH---------VD 53
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LI+TDYCMP MTGY+LL+++K
Sbjct: 54 LILTDYCMPDMTGYDLLREVK--------------------------------------- 74
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+S L+ IPVV ++ I RI C E GAE++++KP+K+SDV RI Y+
Sbjct: 75 ----ESPRLKHIPVVXTCTDVIPERIIECFEGGAEEYMIKPLKVSDVPRILSYM 124
>gi|219888705|gb|ACL54727.1| unknown [Zea mays]
gi|413951287|gb|AFW83936.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 144
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 43/109 (39%)
Query: 94 MPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSS 153
MPGMTGY+LLK++K SS
Sbjct: 1 MPGMTGYDLLKRVK-------------------------------------------GSS 17
Query: 154 ALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+L++IPVVIMSSEN+ ARI RCL+DGAE+F +KPVK +D+K++K +L +
Sbjct: 18 SLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKPADMKKLKSHLLK 66
>gi|413918401|gb|AFW58333.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 170
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 43/114 (37%)
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
VD+++TDYCMP MTGY+LLK IK P
Sbjct: 6 VDMVLTDYCMPEMTGYDLLKAIKALNP--------------------------------- 32
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L IPVV+MSSE+ RI RCL GAEDFIVKP++ DV+R+++
Sbjct: 33 ----------LEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDVQRLRN 76
>gi|413918400|gb|AFW58332.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 168
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 43/114 (37%)
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
VD+++TDYCMP MTGY+LLK IK P
Sbjct: 4 VDMVLTDYCMPEMTGYDLLKAIKALNP--------------------------------- 30
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
L IPVV+MSSE+ RI RCL GAEDFIVKP++ DV+R+++
Sbjct: 31 ----------LEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDVQRLRN 74
>gi|27260986|dbj|BAC45103.1| response regulator-like protein [Oryza sativa Japonica Group]
gi|125603232|gb|EAZ42557.1| hypothetical protein OsJ_27123 [Oryza sativa Japonica Group]
Length = 167
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 53/152 (34%)
Query: 49 LTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKV 108
L S +VTAV+S +AL FL D E +N +I++DYCMP MTGY+LL ++K
Sbjct: 69 LARRSIRVTAVESVMQALMFL--DSEHDVN--------MIVSDYCMPDMTGYDLLMEVK- 117
Query: 109 TTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENI 168
S L +PVVI SS+NI
Sbjct: 118 ------------------------------------------KSPKLAHLPVVIASSDNI 135
Query: 169 LARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
RI +CL+ GA+D+I+KPVK+ D+ RI +Y+
Sbjct: 136 PERIRKCLDGGAKDYILKPVKIVDLPRILNYI 167
>gi|125561365|gb|EAZ06813.1| hypothetical protein OsI_29056 [Oryza sativa Indica Group]
Length = 167
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 53/152 (34%)
Query: 49 LTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKV 108
L S +VTAV+S +AL FL D E +N +I++DYCMP MTGY+LL ++K
Sbjct: 69 LARRSIRVTAVESVMQALMFL--DSEHDVN--------MIVSDYCMPDMTGYDLLMEVK- 117
Query: 109 TTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENI 168
S L +PVVI SS+NI
Sbjct: 118 ------------------------------------------KSPKLAHLPVVIASSDNI 135
Query: 169 LARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
RI +CL+ GA+D+I+KPVK+ D+ RI +Y+
Sbjct: 136 PERIRKCLDGGAKDYILKPVKIVDLPRILNYI 167
>gi|361066661|gb|AEW07642.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141474|gb|AFG52078.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141478|gb|AFG52080.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141482|gb|AFG52082.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141488|gb|AFG52085.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141490|gb|AFG52086.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141492|gb|AFG52087.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141494|gb|AFG52088.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141496|gb|AFG52089.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 48/52 (92%)
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS L+EIPVV+MSSEN+ +R RCL++GAE+FI+KPV++SDVKR+++Y++R
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYMSR 52
>gi|383141470|gb|AFG52076.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141472|gb|AFG52077.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141476|gb|AFG52079.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141486|gb|AFG52084.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 48/52 (92%)
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS L+EIPVV+MSSEN+ +R RCL++GAE+FI+KPV++SDVKR+++Y++R
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYMSR 52
>gi|383141480|gb|AFG52081.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 48/52 (92%)
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS L+EIPVV+MSSEN+ +R RCL++GAE+FI+KPV++SDVKR+++Y++R
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYMSR 52
>gi|383141484|gb|AFG52083.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 48/52 (92%)
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+SS L+EIPVV+MSSEN+ +R RCL++GAE+FI+KPV++SDVKR+++Y++R
Sbjct: 1 ESSKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLREYMSR 52
>gi|297726345|ref|NP_001175536.1| Os08g0358800 [Oryza sativa Japonica Group]
gi|38637522|dbj|BAD03775.1| putative response regulator [Oryza sativa Japonica Group]
gi|118790937|tpd|FAA00272.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125603143|gb|EAZ42468.1| hypothetical protein OsJ_27037 [Oryza sativa Japonica Group]
gi|255678389|dbj|BAH94264.1| Os08g0358800 [Oryza sativa Japonica Group]
Length = 135
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 53/149 (35%)
Query: 52 SSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTP 111
+ +VTAV+S +AL FL D E +N +I++DYCMP MTGY+LL ++K
Sbjct: 40 ENTRVTAVESVMQALVFL--DSEHDVN--------MIVSDYCMPEMTGYDLLMEVK---- 85
Query: 112 FNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILAR 171
S L +PV+I SS+NI R
Sbjct: 86 ---------------------------------------KSPRLVHLPVIIASSDNIPER 106
Query: 172 IDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
I +C + GA+D+I+KPVK++DV RI +Y+
Sbjct: 107 IRKCFDGGAKDYILKPVKIADVPRILNYI 135
>gi|222623065|gb|EEE57197.1| hypothetical protein OsJ_07146 [Oryza sativa Japonica Group]
Length = 158
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 43/113 (38%)
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
+D+++TDYCMP MTGY+LLK IK N
Sbjct: 30 IDIVLTDYCMPEMTGYDLLKAIKALGSPN------------------------------- 58
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIK 197
IPVV+MSSEN RI RCL GAEDFI+KP+K++DV+R++
Sbjct: 59 ------------PIPVVVMSSENEPQRISRCLTAGAEDFILKPLKMNDVQRLR 99
>gi|357167771|ref|XP_003581325.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 81
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 10/78 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+V+AVDDS VDR VI LL S KVTAVDSG+RAL+ LD E + V +IIT
Sbjct: 7 YVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEI--LDSEPN--------VSMIIT 56
Query: 91 DYCMPGMTGYELLKKIKV 108
DY MP MTGY LLKKIK+
Sbjct: 57 DYWMPEMTGYNLLKKIKM 74
>gi|357471533|ref|XP_003606051.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355507106|gb|AES88248.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 153
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
Query: 113 NFLYSTIIVF----LNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENI 168
N LYS + F +N + F F S+ F + N + +S++L++IPVVIMSSEN+
Sbjct: 36 NILYSQLPTFAADTINSMH-FKFNASVDDVFIWSNNKNGIYTESNSLKDIPVVIMSSENV 94
Query: 169 LARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRK 217
+RI+RCLE+GAE+F +KPV+ SDV ++K +L + + NE IN ++
Sbjct: 95 PSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLK-TKVKNEDDLINNKR 142
>gi|222640462|gb|EEE68594.1| hypothetical protein OsJ_27121 [Oryza sativa Japonica Group]
Length = 123
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 43/116 (37%)
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
VD+I++DYCMP MTGY LL ++K
Sbjct: 51 VDMIVSDYCMPDMTGYNLLMEVK------------------------------------- 73
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
S L +PVVI SS+NI RI +CL+ GA+D+I+KPVK+ DV RI Y+
Sbjct: 74 ------KSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYILKPVKIVDVPRIMKYI 123
>gi|218191229|gb|EEC73656.1| hypothetical protein OsI_08184 [Oryza sativa Indica Group]
Length = 54
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
Q+SS L++IPV IMSSEN+ RI RCLE+GAEDF+VKPV+ SDV R+
Sbjct: 2 QESSKLKKIPVAIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRL 48
>gi|146161471|ref|XP_001007239.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146146737|gb|EAR86994.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 847
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 55/193 (28%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+ +HVL +D R + +LT+ +VTAV++GR L DE + +D+
Sbjct: 7 QSIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGR-----LARDELLKADS----NIDI 57
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++ D MP M G ELL
Sbjct: 58 VLLDLYMPEMDGIELLL------------------------------------------- 74
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVN-- 205
L Q+ L+ IPV++MS +N R+ C+ +GA+D++VKP+++ +VK + Y+ + N
Sbjct: 75 LMQEHEHLKRIPVIMMSFDNEQERVAYCIANGAKDYLVKPLRIQNVKGLAKYVEYNPNNT 134
Query: 206 -LGNEGRGINKRK 217
+GN G G+ K
Sbjct: 135 TVGNGGVGLQSYK 147
>gi|413915888|gb|AFW55820.1| hypothetical protein ZEAMMB73_931489 [Zea mays]
Length = 157
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVLAVDDS DRK+IERLL SS +VT VDSG +ALQFLGL ++ S + ++
Sbjct: 70 HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDST--VPPVHTHQLVR 127
Query: 91 DYCMPGMTGYELLKK 105
+P + YEL+ +
Sbjct: 128 RRWLPLPSSYELVGQ 142
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 53/180 (29%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
P+ T +VHVL VDD + R V LL +VT +SG AL+ L G
Sbjct: 16 GPTATSDVHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELL----------RRG 65
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
+ L++TD MPG+ G LL+ ++
Sbjct: 66 TEFHLLLTDVMMPGIDGPALLQIVR----------------------------------- 90
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ LR++PV++MS+ + RC++ GAED+++KPV VK + ++ R
Sbjct: 91 --------NDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLLKPVSRKAVKHMWQHVWR 142
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 53/212 (25%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ +HVL +D R + +LT+ + +VT V++GR A L L E+ +I
Sbjct: 7 ENRNIHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDEL-LKEDSNI-------- 57
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+++ D MP M G+ELL C
Sbjct: 58 DVVLLDLWMPEMDGWELL----------------------------------C------- 76
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVN 205
L Q+ LR IPV++MS++N ++ CL GA+D++VKP+++ VK I +++
Sbjct: 77 --LMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKDYLVKPIRIQMVKGIANHVISSNK 134
Query: 206 LG-NEGRGINKRKARESCDLSSSPPSVITSSS 236
L N G + +K R +S ++ S+
Sbjct: 135 LKTNPGGKVTYKKIRTLGQGASGSVELVQRSN 166
>gi|310639938|ref|YP_003944696.1| sensor protein [Paenibacillus polymyxa SC2]
gi|309244888|gb|ADO54455.1| Sensor protein [Paenibacillus polymyxa SC2]
Length = 1046
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLAVDD V+ +V+E LL + C V AVD ALQ L NG + DL+ITD
Sbjct: 715 VLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL--------NG--RARFDLVITD 764
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+ MP M+G EL ++I+ +
Sbjct: 765 WMMPEMSGIELCRRIR-------------------------------------------E 781
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
+L E+PV+++++ ++ I GA DF+ KPV ++K R++ L
Sbjct: 782 GYSLSELPVLLLTARDLPGDIHAGFMAGANDFLRKPVDAEELKARVRTLL 831
>gi|332664021|ref|YP_004446809.1| guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332332835|gb|AEE49936.1| adenylate/guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1609
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 53/163 (32%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
SD+E+VH+L VDD V+++V++ L + ++T V SG ALQ L D+
Sbjct: 1193 SDSEKVHILIVDDEVVNQQVLKNFLNKAIYRITQVLSGEEALQVLDDDD----------T 1242
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
+DL++ D MP M+GYE+ +KI+ P
Sbjct: 1243 IDLVLLDVMMPRMSGYEVCQKIREK--------------------------------HLP 1270
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
S E+PV++++++N ++ + L GA D+I KP
Sbjct: 1271 S-----------ELPVLMITAKNQVSDLVTGLNTGANDYIAKP 1302
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 56/173 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE--EQSINGFDGLKVDL 87
+HVL +D R + +LT+ +VTAV++GR L DE +Q N +D+
Sbjct: 3 IHVLVAEDDNFQRLALIDILTLCDYQVTAVENGR-----LARDELLKQDSN------IDI 51
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++ D MP M G+ELL +
Sbjct: 52 VLLDLYMPEMDGFELL-------------------------------------------S 68
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
L Q+ L++IPV++MSS+ ++ C+ GA+D+I KP+++ +VK I Y+
Sbjct: 69 LMQEHENLQKIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRVQNVKAIAKYV 121
>gi|15225720|ref|NP_178754.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|4309766|gb|AAD15535.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250959|gb|AEC06053.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 136
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ +++ +S+A R I VVIMSSEN+ RI RCLE GAE+F +KPVKL D ++K ++ +
Sbjct: 3 ARDVKWESAAFRSIHVVIMSSENVPTRISRCLEKGAEEFFLKPVKLVDHTKLKPHMMK 60
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 53/179 (29%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P T +VHVL VDD + R V LL +VT +SG AL+ L G
Sbjct: 24 PVTTSDVHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLR----------RGT 73
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
+ +++TD MPG+ G LL+ ++
Sbjct: 74 EFHMLLTDVMMPGIDGPALLQIVR------------------------------------ 97
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ LR++PVV+MS+ + RC++ GAED+++KPV VK + ++ R
Sbjct: 98 -------NDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPVSRRAVKHMWTHVWR 149
>gi|308067232|ref|YP_003868837.1| regulator of cell autolysis [Paenibacillus polymyxa E681]
gi|305856511|gb|ADM68299.1| Putative regulator of cell autolysis [Paenibacillus polymyxa E681]
Length = 1039
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLAVDD V+ +V+E LL + C V AVD AL L NG + DL+ITD
Sbjct: 707 VLAVDDDEVNLRVLEELLYTTGCSVVAVDHAEEALHML--------NG--RTRFDLVITD 756
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+ MP M+G EL ++I+ +
Sbjct: 757 WMMPEMSGIELCRRIR-------------------------------------------E 773
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
+L E+PV+++++ ++ I GA DF+ KPV ++K R++ L
Sbjct: 774 RYSLSELPVLLLTARDLPGDIRAGFMAGANDFLRKPVDAEELKARVRTLL 823
>gi|449529114|ref|XP_004171546.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 127
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 43/51 (84%)
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
S ++IPVV+MSSEN +RI+ CLE+GAE+F++KP++LSDVK+++ +L +
Sbjct: 1 GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQK 51
>gi|242081263|ref|XP_002445400.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
gi|241941750|gb|EES14895.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
Length = 141
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 53/169 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ VD V LL + +V AV +AL+ L + V LI+++
Sbjct: 26 VLIVENCQVDYFVTSYLLRGHNVQVIAVQGPLQALELLNAEHN----------VKLILSN 75
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
Y MP MTGY+LL ++K
Sbjct: 76 YWMPNMTGYDLLMEMK-------------------------------------------K 92
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
S L +PVVI S + + +CL+ GA+D+I+KP+K +DV RI ++
Sbjct: 93 SPKLSHLPVVITSFDKSPEVVKKCLDGGAKDYIIKPIKHADVPRILSFI 141
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 51/172 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDD + R V+ LL +VT+ G AL+ L G L++T
Sbjct: 49 HVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLL--------RGSAPDTFQLVLT 100
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D CMP + G +LL +K Q
Sbjct: 101 DVCMPELNGIQLLSCVK------------------------------------------Q 118
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
D++ LR +PVV+MSS + + C++ GAE+++VKPV +V+ I ++ R
Sbjct: 119 DAN-LRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTKKEVQHIWQHVWR 169
>gi|386039129|ref|YP_005958083.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
gi|343095167|emb|CCC83376.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
Length = 1046
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLAVDD V+ +V+E LL + C V AVD ALQ L NG + DL+ITD
Sbjct: 715 VLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL--------NG--RARFDLVITD 764
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+ MP M+G L ++I+ +
Sbjct: 765 WMMPEMSGIGLCRRIR-------------------------------------------E 781
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
+L E+PV+++++ ++ I GA DF+ KPV ++K R++ L
Sbjct: 782 GYSLSELPVLLLTARDLPGDIHAGFMAGANDFLRKPVDAEELKARVRTLL 831
>gi|281209484|gb|EFA83652.1| histidine kinase [Polysphondylium pallidum PN500]
Length = 1067
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 49/189 (25%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
SP D E+ VL VDD+ V+R+V ++L C V V SG AL + +
Sbjct: 928 SPHDKLEMRVLVVDDNMVNRQVAYKMLQSMGCNVDVVSSGMEAL-----------DRIEK 976
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
+ D+I D MPGM G+++ K+I+
Sbjct: 977 VTYDMIFLDIMMPGMDGFQVTKEIR----------------------------------- 1001
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L++ S+ + IP++ M++ +C+ G +D++ KP+K+++ + + +
Sbjct: 1002 --ERELKR-SNGTKHIPIIAMTANAFKEDEVKCINSGMDDYLSKPIKITEFRLLMSKWRQ 1058
Query: 203 DVNLGNEGR 211
++ L + +
Sbjct: 1059 NIFLATQTK 1067
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+D R V+ LL S KVTAV +G +A + L E NG +DL++
Sbjct: 73 IKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVL----EDPENG-----IDLVL 123
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI
Sbjct: 124 TEVAMPILSGIGLLCKI------------------------------------------- 140
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 141 MSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVWR 193
>gi|431929412|ref|YP_007242446.1| PAS domain-containing protein [Pseudomonas stutzeri RCH2]
gi|431827699|gb|AGA88816.1| PAS domain S-box [Pseudomonas stutzeri RCH2]
Length = 801
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
S D + +L VDD R+V ++L V DSG ALQ LG +G
Sbjct: 674 SQEDNSQHRILLVDDDHAVREVTAQMLQNLGFAVIEADSGEHALQLLG----------EG 723
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTP 111
++VDL++ D+ MPGM G EL + ++V P
Sbjct: 724 IEVDLLLADFAMPGMNGGELARAVRVGQP 752
>gi|339782123|gb|AEK07903.1| putative type A response regulator [Elaeis guineensis]
Length = 82
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 58/84 (69%), Gaps = 7/84 (8%)
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYS-TIIVFLNLQ---NLFLFILSICFCFPFFFP 144
ITDYCMP MTGY+LLKKIKV T +YS +++ +++ +L L +++I + +
Sbjct: 1 ITDYCMPEMTGYDLLKKIKVPTIVVQIYSLWLLIKFDMKEFCSLALMLVAIKRAYEDYLI 60
Query: 145 SNNLEQDSSALREIPVVIMSSENI 168
+ E +SS+L++IPVVIMSSEN+
Sbjct: 61 A---ELESSSLKDIPVVIMSSENV 81
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 49/172 (28%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E HVL V+D V K +E+LL + KVT +GR A++ L + G+KVDLI
Sbjct: 2 EFHVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVL------TACRHSGVKVDLI 55
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+TD MP +TG++L+ ++ + FC
Sbjct: 56 LTDILMPEVTGFDLINEV-------------------------VHGDTFC---------- 80
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
++PVV+MSS++ + + + GA D+++KP++ +++ + ++
Sbjct: 81 --------DVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATLWQHV 124
>gi|443315490|ref|ZP_21044978.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442784916|gb|ELR94768.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 1118
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 55/189 (29%)
Query: 14 SDE-IDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
+DE + + S+ ++ VL VDD ++R+V+ L++ + +T +G+ AL+ + D
Sbjct: 693 ADEMVQALPIPSSNGAQIKVLIVDDEPINRQVLINNLSLYNYAITEASNGQEALKII--D 750
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFI 132
E G DLI+ D MP MTGYE+ KKI+
Sbjct: 751 E--------GFLPDLILLDVMMPRMTGYEVCKKIRDR----------------------- 779
Query: 133 LSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 192
FPS E+P+V+++++N +A I E GA D++ KP++ +
Sbjct: 780 ----------FPS----------YELPIVMLTAKNQVADIVEGFESGANDYLCKPIQKQE 819
Query: 193 -VKRIKDYL 200
+ RIK +L
Sbjct: 820 MLARIKTHL 828
>gi|400595315|gb|EJP63120.1| putative histidine kinase HHK6p [Beauveria bassiana ARSEF 2860]
Length = 1379
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 51/251 (20%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQF-LGLDEEQSING 79
DL S+ H+L V+D+ V++K+ R + +VTA +GR AL++ LG E +++
Sbjct: 1095 DLPRSERAAFHILVVEDNAVNQKIATRTIRKLGFQVTAAWNGREALEYVLGASEGRNV-- 1152
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
K D+I+ D MP + GY+ ++ P+ L
Sbjct: 1153 ----KPDIILMDVQMPIIDGYKCTHLMRHHRPYKGL------------------------ 1184
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR--IK 197
+ +P+V M++ I ++C G +D++ KPV +S ++R I+
Sbjct: 1185 ---------------IHNVPIVAMTASAIQGDREKCKRAGMDDYLAKPVTMSILERMLIR 1229
Query: 198 DYLTRDVNLGNEGRGINK-RKARESCDLSSSPPSVITSSSSPSSPSSPFRSPSI-LSSSA 255
++R R ++ + E CD SS P + ++++ S S + + + S+
Sbjct: 1230 WCVSRRRESSVADRAVSDCSELSEHCDASSIPHIAVGNNATVSQNSLDYGNETQDDSTGG 1289
Query: 256 PCSP-PSTLDS 265
P +P P+T +
Sbjct: 1290 PVTPTPATANG 1300
>gi|323493067|ref|ZP_08098201.1| histidine kinase [Vibrio brasiliensis LMG 20546]
gi|323312715|gb|EGA65845.1| histidine kinase [Vibrio brasiliensis LMG 20546]
Length = 1088
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 52/183 (28%)
Query: 15 DEIDGFDLSPSDTEEVH--VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
++I+ D + S+ E+ H +L VDD +R V++R LT + G+ ALQ
Sbjct: 811 EQIEHKDRAGSEPEQKHGLILVVDDQVTNRDVLQRQLTYLGYQCEMATQGQEALQMWQTG 870
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFI 132
E DLI+TD MP M GYE K+++
Sbjct: 871 E-----------FDLILTDCHMPVMDGYEFSKQVR------------------------- 894
Query: 133 LSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 192
+E A IP++ +++ ++ ++C+ G +D++ KPV+LS
Sbjct: 895 --------------KIENQDKARGHIPIIAITANAMVEASEQCMISGMDDYLTKPVELST 940
Query: 193 VKR 195
+ R
Sbjct: 941 LNR 943
>gi|413924848|gb|AFW64780.1| hypothetical protein ZEAMMB73_536209 [Zea mays]
Length = 122
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%), Gaps = 2/50 (4%)
Query: 150 QDSSALREIPVVIMSSENILARID--RCLEDGAEDFIVKPVKLSDVKRIK 197
+DSS+LR+IPVVIMSSEN +RI+ RCLE+GA++ +KPV+LSD+ IK
Sbjct: 11 KDSSSLRDIPVVIMSSENNPSRINRTRCLEEGADESFLKPVRLSDMSNIK 60
>gi|238011048|gb|ACR36559.1| unknown [Zea mays]
Length = 154
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 47/105 (44%), Gaps = 43/105 (40%)
Query: 94 MPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSS 153
MP MTGY+LLK IK + N
Sbjct: 1 MPEMTGYDLLKAIKALSSPN---------------------------------------- 20
Query: 154 ALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKD 198
IPVV+MSSEN RI RCL GAEDFI+KP+K DV+R+++
Sbjct: 21 ---PIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLRN 62
>gi|440467612|gb|ELQ36823.1| sensory/regulatory protein rpfC [Magnaporthe oryzae Y34]
Length = 1436
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 44/183 (24%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
DLS +D E+HVL V+D+ + +++ + + KV AV +G+ AL +L E + +G
Sbjct: 1120 DLSMADRAEMHVLLVEDNLIIQQIAIKNIKKLGFKVDAVWNGKEALAYL----EGAQDGK 1175
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
+ K D+I+ D MP + GY + ++ +F Y T +
Sbjct: 1176 N-PKPDIILMDVQMPVLDGYRTVHLLR----HHFPYKTYV-------------------- 1210
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
++P+V M++ I +RC++ G +D++ KPVK ++++
Sbjct: 1211 ---------------NDVPIVAMTASAIQGDRERCMQAGMDDYLAKPVKSKLLEKMLVRW 1255
Query: 201 TRD 203
T+D
Sbjct: 1256 TKD 1258
>gi|254283593|ref|ZP_04958561.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
gi|219679796|gb|EED36145.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
Length = 479
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 54/156 (34%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+LAVDD +R++I RLL S V +SG AL+ LG + VD+++ D
Sbjct: 127 ILAVDDMPENRELISRLLHRSGHTVITAESGEEALELLGT-----------MAVDVVLLD 175
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPG+ G E+L+++K D
Sbjct: 176 LMMPGIGGAEVLRRLK-------------------------------------------D 192
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
LR PVV++S + +I C++ GA+D+++KP
Sbjct: 193 DPELRATPVVMISGRQDMQQIIGCIQAGADDYLLKP 228
>gi|389633229|ref|XP_003714267.1| sensory/regulatory protein rpfC [Magnaporthe oryzae 70-15]
gi|351646600|gb|EHA54460.1| sensory/regulatory protein rpfC [Magnaporthe oryzae 70-15]
Length = 1412
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 44/183 (24%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
DLS +D E+HVL V+D+ + +++ + + KV AV +G+ AL +L E + +G
Sbjct: 1096 DLSMADRAEMHVLLVEDNLIIQQIAIKNIKKLGFKVDAVWNGKEALAYL----EGAQDGK 1151
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
+ K D+I+ D MP + GY + ++ +F Y T +
Sbjct: 1152 N-PKPDIILMDVQMPVLDGYRTVHLLR----HHFPYKTYV-------------------- 1186
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
++P+V M++ I +RC++ G +D++ KPVK ++++
Sbjct: 1187 ---------------NDVPIVAMTASAIQGDRERCMQAGMDDYLAKPVKSKLLEKMLVRW 1231
Query: 201 TRD 203
T+D
Sbjct: 1232 TKD 1234
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VLAVDD V K++ER L + T V R AL L E+ DG + DL+I
Sbjct: 10 LRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDML---RERK----DGNQFDLVI 62
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+D MP M G++LL+ I LE
Sbjct: 63 SDVVMPNMDGFKLLELI----------------------------------------GLE 82
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRD 203
D +PV+++S+ N I + ++ GA D+IVKPV+L ++ I ++ ++
Sbjct: 83 MD------LPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLRGIWTHVVKN 130
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VD R+V+ LL +V ++G++A +L D + SI DL++
Sbjct: 61 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-EDMQNSI--------DLVL 111
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MPG++G LL +I +IC
Sbjct: 112 TEVVMPGVSGISLLSRI------------------------MNHNIC------------- 134
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 135 ------KNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 181
>gi|440477281|gb|ELQ58381.1| sensory/regulatory protein rpfC [Magnaporthe oryzae P131]
Length = 1354
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 44/183 (24%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
DLS +D E+HVL V+D+ + +++ + + KV AV +G+ AL +L E + +G
Sbjct: 1038 DLSMADRAEMHVLLVEDNLIIQQIAIKNIKKLGFKVDAVWNGKEALAYL----EGAQDGK 1093
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
+ K D+I+ D MP + GY + ++ +F Y T +
Sbjct: 1094 N-PKPDIILMDVQMPVLDGYRTVHLLR----HHFPYKTYV-------------------- 1128
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
++P+V M++ I +RC++ G +D++ KPVK ++++
Sbjct: 1129 ---------------NDVPIVAMTASAIQGDRERCMQAGMDDYLAKPVKSKLLEKMLVRW 1173
Query: 201 TRD 203
T+D
Sbjct: 1174 TKD 1176
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+D R V+ LL S +VTAV +G +A + L E NG +DL++
Sbjct: 90 IKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVL----EDPENG-----IDLVL 140
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI
Sbjct: 141 TEVAMPILSGIGLLCKI------------------------------------------- 157
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 158 MSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVWR 210
>gi|346320308|gb|EGX89909.1| autoinducer 2 sensor kinase/phosphatase luxQ [Cordyceps militaris
CM01]
Length = 1379
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 46/177 (25%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQF-LGLDEEQSING 79
DL S+ H+L V+D+ V++K+ R + +VTA +GR AL++ LG E ++
Sbjct: 1094 DLPRSERAAFHILVVEDNAVNQKIATRTIRKLGFQVTATWNGREALEYVLGASEGRNA-- 1151
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
K D+I+ D MP + GY+ ++ P+ L
Sbjct: 1152 ----KPDIILMDVQMPIIDGYKCTHLMRHHRPYKGL------------------------ 1183
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+ ++P+V M++ I ++C + G +D++ KPV +S ++R+
Sbjct: 1184 ---------------IHDVPIVAMTASAIQGDREKCKKAGMDDYLAKPVTMSILERM 1225
>gi|119505208|ref|ZP_01627283.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
gi|119458899|gb|EAW39999.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
Length = 482
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 55/166 (33%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
L PS+ V +LAVDD +R+++ RLL + V + +SG AL+ L D
Sbjct: 121 LLPSEEPGV-ILAVDDLPENRELVSRLLQKTGHTVISAESGEEALELL-----------D 168
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
+ VD+++ D MPG+ G E+LK++K
Sbjct: 169 TMGVDVVLLDLVMPGIGGAEVLKRLK---------------------------------- 194
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+ LR PVV++S + + +I C+E GA+D+++KP
Sbjct: 195 ---------EDERLRATPVVMISGQQDMDQIVMCIEAGADDYLLKP 231
>gi|224102357|ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
gi|222852468|gb|EEE90015.1| type-b response regulator [Populus trichocarpa]
Length = 642
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD K++E++L S +VT R AL L + G+D ++I+D
Sbjct: 20 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLL----RERKGGYD-----IVISD 70
Query: 92 YCMPGMTGYELLKKIKVTTPF----NFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
MP M G++LL+++ + F T+ + N +L I C + +
Sbjct: 71 VYMPDMDGFKLLEQVGLEMDLPVISRFFSLTLEFYFNANIFYLRIHIPMSCLHYIYIGIL 130
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++ +S ++ +MS + +R+ + ++ GA D+++KP+++ +++ I ++ R
Sbjct: 131 IQLLTSCACQL--TVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFR 183
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R V+ LL S +VTAV +G A +FL E S N VD+++T+
Sbjct: 79 VLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFL---ENLSNN------VDIVLTE 129
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP +TG LL KI
Sbjct: 130 VVMPSLTGIGLLDKI-------------------------------------------MS 146
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 147 HMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 197
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VD R+V+ LL +V ++G++A +L D + SI DL++
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-EDMQNSI--------DLVL 112
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MPG++G LL +I +IC
Sbjct: 113 TEVVMPGVSGISLLSRI------------------------MNHNIC------------- 135
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 136 ------KNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 182
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDD R V+ LL +VTAV +G +A + L E+ G ++DL++
Sbjct: 74 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKAL---ED------PGNRIDLVL 124
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI S I
Sbjct: 125 TEVAMPFVSGIGLLCKI---------MSHI------------------------------ 145
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
AL+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 146 ----ALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWR 194
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDD R V+ LL +VTAV +G +A + L E+ G ++DL++
Sbjct: 86 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKAL---ED------PGNRIDLVL 136
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI S I
Sbjct: 137 TEVAMPFVSGIGLLCKI---------MSHI------------------------------ 157
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
AL+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 158 ----ALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWR 206
>gi|328874987|gb|EGG23352.1| histidine kinase [Dictyostelium fasciculatum]
Length = 1142
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 75/191 (39%), Gaps = 55/191 (28%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
SP D E+ VL VDD+ V+R+V R++ + C SG AL + +
Sbjct: 1002 SPHDLMEIRVLVVDDNGVNRQVALRMMQSAGCNADLASSGMEAL-----------DKMET 1050
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
D+I D MP M G+++ K+I+
Sbjct: 1051 THYDIIFLDIMMPQMDGFQVTKEIR----------------------------------- 1075
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK----RIKD 198
E R IP+V M++ +CL+ G D+I KP+K+S V+ + K
Sbjct: 1076 ----EREVQKGVTRMIPIVAMTANAFKEDEAQCLKCGMNDYIPKPMKISQVRLMINKWKH 1131
Query: 199 YLTRDVNLGNE 209
Y+ NL N+
Sbjct: 1132 YIFNQ-NLSNQ 1141
>gi|90020314|ref|YP_526141.1| response regulator receiver domain-containing protein [Saccharophagus
degradans 2-40]
gi|89949914|gb|ABD79929.1| GGDEF domain [Saccharophagus degradans 2-40]
Length = 1526
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 56/187 (29%)
Query: 23 SPSDTEEV-HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
S SDT H+L VDD V+RKV+ L++ V V SG A+ ++ +
Sbjct: 1136 SKSDTARTYHILIVDDEPVNRKVLANYLSLKYYTVHEVRSGMEAITYVR----------N 1185
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
G KVDLI+ D MP M+GYE K+
Sbjct: 1186 GPKVDLILLDIMMPKMSGYEACKQ------------------------------------ 1209
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
L Q SA E+P++++++ + ++ + GA DFI KP+ + + R+ +L
Sbjct: 1210 ------LRQQYSA-NELPIILLTARSQVSDLVTGFNSGANDFITKPIAKEELLARVHTHL 1262
Query: 201 T-RDVNL 206
RD+ L
Sbjct: 1263 QLRDITL 1269
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VD R+V+ LL +V ++G++A +L D + SI DL++
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-EDMQNSI--------DLVL 112
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MPG++G LL +I +IC
Sbjct: 113 TEVVMPGVSGISLLSRI------------------------MNHNIC------------- 135
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 136 ------KNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 182
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VD R+V+ LL +V ++G++A +L D + SI DL++
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-EDMQNSI--------DLVL 112
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MPG++G LL +I +IC
Sbjct: 113 TEVVMPGVSGISLLSRI------------------------MNHNIC------------- 135
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 136 ------KNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 182
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VD R+V+ LL +V ++G++A +L D + SI DL++
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-EDMQNSI--------DLVL 112
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MPG++G LL +I +IC
Sbjct: 113 TEVVMPGVSGISLLSRI------------------------MNHNIC------------- 135
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 136 ------KNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 182
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 56/171 (32%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+++V+ VDD V ++ R+L S +V AVD ++AL L + + +DLI
Sbjct: 15 KINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRD---------NIDLI 65
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
ITDY MPGM G +L K+I
Sbjct: 66 ITDYYMPGMNGLQLKKQI------------------------------------------ 83
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+ +PV++MSS+ + + L GA FI KP+ +D+ +I +
Sbjct: 84 ---TQEFGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPTDLTKIYQF 129
>gi|408399309|gb|EKJ78418.1| hypothetical protein FPSE_01392 [Fusarium pseudograminearum CS3096]
Length = 1368
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 44/169 (26%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
+L PS+ ++HVL V+D+ +++K+ + + +VTA +G+ AL++L ++ IN
Sbjct: 1094 ELPPSERAKIHVLVVEDNPINQKIATKTIGRLGFQVTAAWNGKEALEYLA-GVQKGIN-- 1150
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
K D+I+ D MP + GY+ ++ P+ L
Sbjct: 1151 --QKPDIILMDVQMPIIDGYKCTHLLRHHMPYKPL------------------------- 1183
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
++++P+V M++ I ++C + G +D++ KPV+
Sbjct: 1184 --------------VQDVPIVAMTASAIQGDREKCTKAGMDDYLAKPVR 1218
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 72/180 (40%), Gaps = 54/180 (30%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P+D VH+L VDD + R V+ LL S KVT SG AL+ L G
Sbjct: 1 APND---VHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEIL--------RGQPP 49
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
LI+TD MP + G ELL+ ++
Sbjct: 50 GTFSLILTDVMMPDVDGIELLRHVR----------------------------------- 74
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
A +PV++MS+ + C+ GAED+++KPV +V+ + ++ R
Sbjct: 75 --------GDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMWQHVWR 126
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 52/175 (29%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E ++VL V+ R+V+ LL +V + ++G++A +L E++ N +DL
Sbjct: 49 ETLNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYL---EDKRNN------IDL 99
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++T+ MPG++G LL +I S+N
Sbjct: 100 VLTEVFMPGVSGISLLSRIM-------------------------------------SHN 122
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ + IPV++MSS + ++ + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 123 I------CKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 171
>gi|189207673|ref|XP_001940170.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976263|gb|EDU42889.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1362
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 45/184 (24%)
Query: 23 SPSDTEE---VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING 79
SP+D+ +HVL V+D+ V++KV+ + LT + C ++ D+G AL+ L++ N
Sbjct: 1217 SPNDSPNETCLHVLVVEDNLVNQKVLCKQLTKAGCHISTADNGVWALKH--LEKTNFRNN 1274
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+G+ + +I+ D MP M G +KI+
Sbjct: 1275 TNGIPLSIILMDCEMPEMDGLTCCRKIR-------------------------------- 1302
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKD 198
+EQ+ R +P++ +++ +ID E G ++ I KP ++ D + ++K
Sbjct: 1303 -------EMEQNGELNRHVPIIAVTANIRGGQIDTAKEAGMDEVIGKPFRIPDLLAKMKG 1355
Query: 199 YLTR 202
L R
Sbjct: 1356 LLER 1359
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 57/192 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VLAVDD+ V K++ LL KVTA AL+ L + E D++I
Sbjct: 148 LRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRE---------NFDIVI 198
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M G+ LLK I LE
Sbjct: 199 TDVKMPDMDGFTLLKII----------------------------------------GLE 218
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
D IPV++ S + + + + + GA D+++KPV++ ++K I ++ R NL +
Sbjct: 219 MD------IPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHVVRK-NLFDS 271
Query: 210 GR-GINKRKARE 220
G+ G+ + KA E
Sbjct: 272 GKPGVKEEKAME 283
>gi|334137368|ref|ZP_08510806.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333605141|gb|EGL16517.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1040
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD V+ +V+ LL++ ++ AVD G +A+ +G G +DL+I D
Sbjct: 704 VLLVDDDPVNLQVLYNLLSVEGYRLIAVDGGAKAMAHIG----------SGQSIDLVIAD 753
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+ MPGM+G EL + I+
Sbjct: 754 WMMPGMSGLELCRAIRARL----------------------------------------- 772
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
+L E+PV+++++ ++ + + GA DF+ KPV +++ R++ L
Sbjct: 773 --SLAELPVLLLTARSLPEDVRTGFQAGANDFLRKPVDADELRARVRTLL 820
>gi|411118667|ref|ZP_11391047.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
gi|410710530|gb|EKQ68037.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
Length = 351
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 54/162 (33%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D E +L VDD +R ++ R L KVT +GR AL GL ++QS
Sbjct: 2 DFELGSLLVVDDMEANRDLLTRRLQRQGHKVTVATNGREAL---GLIKQQSF-------- 50
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DLI+ D MP M GY++L+++K
Sbjct: 51 DLILCDIMMPEMDGYQVLEELKA------------------------------------- 73
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
LR IPV+++S+ + + + RC+E GAED++ KP
Sbjct: 74 ------DPGLRHIPVIMISALDDMESVVRCIELGAEDYLFKP 109
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V ++G++A +L D + SI DL++
Sbjct: 61 IKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL-EDMQNSI--------DLVL 111
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MPG++G LL +I +IC
Sbjct: 112 TEVVMPGVSGISLLSRI------------------------MNHNIC------------- 134
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 135 ------KNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 181
>gi|428217823|ref|YP_007102288.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
gi|427989605|gb|AFY69860.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
Length = 243
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 82/218 (37%), Gaps = 80/218 (36%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDDS ++R + R L CK+T G+ AL+ L S F DLI+ D
Sbjct: 8 VLIVDDSEMNRDTLARRLRQQGCKITMAADGKEALKIL------SKQLF-----DLILLD 56
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP + GY +L K+K
Sbjct: 57 IMMPEVDGYTVLGKVKA------------------------------------------- 73
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGR 211
S L+ +PV+++S+ L + RC+E GAED++ KP D +K + R
Sbjct: 74 SETLQHMPVIMISALEELDSVMRCMEMGAEDYLTKPF---DPVLLKAAIAR--------- 121
Query: 212 GINKRKARESCDLSSSPPSVITSSSSPSSPSSPFRSPS 249
LS +PP T +P P++P P
Sbjct: 122 -----------SLSKNPPRATT---APEIPAAPLAKPQ 145
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 54/178 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG-LKVDLI 88
+ VL V+ + R++I LL S +V AV G A + L DG +DLI
Sbjct: 41 LRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETLK----------DGPNNIDLI 90
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+T+ +P ++GY LL ++ FC
Sbjct: 91 LTEVDLPLISGYALL--------------------------TLVMEHDFC---------- 114
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNL 206
+ IPV++MSS + ++++ +C+ GA DF++KPV+ +++K + ++ R L
Sbjct: 115 -------KNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELKNLWQHVWRRQTL 165
>gi|428309074|ref|YP_007120051.1| serine phosphatase RsbU, regulator of sigma subunit [Microcoleus
sp. PCC 7113]
gi|428250686|gb|AFZ16645.1| serine phosphatase RsbU, regulator of sigma subunit [Microcoleus
sp. PCC 7113]
Length = 974
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 54/176 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D ++++L VDD V+R+V L + + + +G AL L GLK
Sbjct: 595 DGSKINILIVDDEPVNRQVFANYLALHNYGINQASNGLEALALLE----------RGLKP 644
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DL++ D MP +TGYE+ +KI+ T N
Sbjct: 645 DLVLLDVMMPRLTGYEVTRKIRETWQAN-------------------------------- 672
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
E+PV+++S++N ++ + LE GA D++ KP+ + + RIK +L
Sbjct: 673 -----------ELPVLLLSAKNQVSDLVVGLEVGANDYLTKPISKDELLARIKTHL 717
>gi|118351766|ref|XP_001009158.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila]
gi|89290925|gb|EAR88913.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila SB210]
Length = 135
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 53/172 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVL +D R + +L + + +VTAV++GR A L L ++Q K+D+++
Sbjct: 3 IHVLFAEDDNFQRLAVTHILQLCNYQVTAVENGRIARDIL-LKQDQ--------KIDIVL 53
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MP M ELL + ++
Sbjct: 54 LDIRMPEMDALELL------------------------------------------SFMQ 71
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
+ S L++IPVVI+S ++ I LE GA+DFI+KP+K+ + K I Y+
Sbjct: 72 EHSENLQKIPVVIISLNDL--EIQTFLERGAKDFIIKPMKIQNAKAIAKYVQ 121
>gi|302765190|ref|XP_002966016.1| hypothetical protein SELMODRAFT_84824 [Selaginella moellendorffii]
gi|300166830|gb|EFJ33436.1| hypothetical protein SELMODRAFT_84824 [Selaginella moellendorffii]
Length = 740
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 23 SPSDT-EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
+P D + +LAVDD+ V+R VI RLL CK T V+SG L+ L + + +
Sbjct: 612 APGDNFHSLKILAVDDNAVNRTVIRRLLNNLGCKSTVVESGETCLKTLAAEGPSAYS--- 668
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLY 116
+++ D CMP M GYEL +I+ P L+
Sbjct: 669 -----IVLVDLCMPEMDGYELTAEIQKLYPREGLH 698
>gi|254412597|ref|ZP_05026370.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196180332|gb|EDX75323.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 1116
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 54/171 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L VDD + +VI L++ + +T S AL+ + L G K DLI+
Sbjct: 711 HILIVDDEPTNLQVIVNHLSLQNYAITQASSALEALELIRL----------GFKPDLILL 760
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D MP MTGYEL KK++ F P+
Sbjct: 761 DIMMPQMTGYELCKKLREQ--------------------------------FLPN----- 783
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYL 200
E+P+V+++++N ++ + GA D++ KPV K + RIK +L
Sbjct: 784 ------ELPIVLLTAKNQISDLVEGFAVGANDYLTKPVLKNELLARIKTHL 828
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 66/217 (30%)
Query: 14 SDEIDGFDLSPSDTEEV-----HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQF 68
S E+ G DL+ SD+ E+ VL VDD + KV+E +L + +VT +G+ AL+
Sbjct: 33 SGEMSGEDLARSDSWEMFPAGLKVLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAALEK 92
Query: 69 LGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNL 128
L ++S++ DL+++D MP M G++LL+ I
Sbjct: 93 L---RDRSVH------FDLVLSDVYMPDMDGFKLLEHI---------------------- 121
Query: 129 FLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
LE D +PV++MSS + R + GA DF++KPV
Sbjct: 122 ------------------GLELD------LPVIMMSSNGETNVVLRGVTHGAVDFLIKPV 157
Query: 189 KLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLS 225
++ +++ + ++ R R +AR+S D+S
Sbjct: 158 RVEELRNVWQHVVR------RKRDQAVSQARDSRDIS 188
>gi|46107708|ref|XP_380913.1| hypothetical protein FG00737.1 [Gibberella zeae PH-1]
Length = 1370
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 44/169 (26%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
+L PS+ ++HVL V+D+ +++K+ + + +VTA +G+ AL++L ++ +N
Sbjct: 1094 ELLPSERAKIHVLVVEDNPINQKIATKTIGRLGFQVTAAWNGKEALEYLA-GVQKGVN-- 1150
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
K D+I+ D MP + GY+ ++ P+ L
Sbjct: 1151 --QKPDIILMDVQMPIIDGYKCTHLLRHHMPYKPL------------------------- 1183
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
++++P+V M++ I ++C + G +D++ KPV+
Sbjct: 1184 --------------VQDVPIVAMTASAIQGDREKCTKAGMDDYLAKPVR 1218
>gi|312281623|dbj|BAJ33677.1| unnamed protein product [Thellungiella halophila]
Length = 59
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 36/55 (65%)
Query: 1 MTTTNGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCK 55
M GV+ LR G + +P D +EVHVLAVDDS VDR VIERLL I+SCK
Sbjct: 1 MARDGGVSCLRRSEMMKVGMESAPLDLDEVHVLAVDDSLVDRIVIERLLRITSCK 55
>gi|403381459|ref|ZP_10923516.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
JC66]
Length = 1069
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V+ +V+E +L+ + +VT V SG+ AL L D + DL+I+D
Sbjct: 746 ILMVDDDPVNLQVMEAILSPDNYEVTMVTSGKEALAML-----------DKKEWDLVISD 794
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M+GYEL +KI+ +
Sbjct: 795 IMMPQMSGYELTRKIR-------------------------------------------E 811
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
L E+PV+++++ + I GA D++ KPV+ +++ D LT
Sbjct: 812 RFTLTELPVLLLTARDQGKDIQAGFLAGANDYVAKPVEALEIRSRVDMLT 861
>gi|386827283|ref|ZP_10114390.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Beggiatoa alba B18LD]
gi|386428167|gb|EIJ41995.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Beggiatoa alba B18LD]
Length = 1322
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 53/157 (33%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD ++ V+ LT ++ SG LQ L DG+K DLI+ D
Sbjct: 705 ILLVDDELINLHVLSNYLTPHGYELIHATSGHEVLQILE----------DGVKPDLILLD 754
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP MTGYE+ KK++ N
Sbjct: 755 IMMPKMTGYEVCKKVRARYNAN-------------------------------------- 776
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
E+P++I+S++N + + L GA D++VKPV
Sbjct: 777 -----ELPIIIISAKNQVNDLVSGLNAGANDYLVKPV 808
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 82/192 (42%), Gaps = 57/192 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VLAVDD+ V K++ LL KVTA AL+ L E N D++I
Sbjct: 156 LRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEML---RENRXN------FDIVI 206
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M G+ LLK I LE
Sbjct: 207 TDVKMPDMDGFTLLKII----------------------------------------GLE 226
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
D IPV++ S + + + + + GA D+++KPV++ ++K I ++ R NL +
Sbjct: 227 MD------IPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHVVRK-NLFDS 279
Query: 210 GR-GINKRKARE 220
G+ G+ + KA E
Sbjct: 280 GKPGVKEEKAME 291
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R V+ LL S +V AV +G +A + L + +N DL++T+
Sbjct: 76 VLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKIL-----EDMNNH----TDLVLTE 126
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI+ +
Sbjct: 127 VVMPILSGIGLLCKIR-------------------------------------------N 143
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
LR IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 144 HKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 194
>gi|300867045|ref|ZP_07111713.1| putative adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
gi|300334942|emb|CBN56879.1| putative adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
Length = 1122
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 54/183 (29%)
Query: 20 FDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING 79
D ++ ++ VL VDD ++R+V+ L++ + +T +G+ AL +
Sbjct: 701 LDPKINNEKQFKVLIVDDEPINRQVLINNLSLYNYAITEASNGQEALTAME--------- 751
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
+G DLI+ D MP MTGYE+ +KI+ F
Sbjct: 752 -NGFIPDLILLDLMMPQMTGYEVCQKIRAR-----------------------------F 781
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKD 198
P + E+P+V+++++N +A I E GA D++ KP++ + + RIK
Sbjct: 782 PTY--------------ELPIVMLTAKNQVADIVEGFESGANDYLSKPIQKQEMLARIKT 827
Query: 199 YLT 201
+++
Sbjct: 828 HIS 830
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R V+ LL S +VTAV +G A + L E S N VD+++T+
Sbjct: 79 VLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVL---ENLSNN------VDIVLTE 129
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI S I
Sbjct: 130 VVMPSLSGIGLLDKI---------MSHI-------------------------------- 148
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 149 --TLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 197
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V++ R+V+ LL +V + ++G A Q+L ++ Q+ ++DL++
Sbjct: 82 LRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYL--EDLQN-------RIDLVL 132
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI +S C
Sbjct: 133 TEVAMPCLSGISLLSKI--------------------------MSHKIC----------- 155
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 156 ------KDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHIWR 202
>gi|443318409|ref|ZP_21047662.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442781999|gb|ELR92086.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 1182
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D + +L VDD V+R+VI L++ S +VT +G AL L +GL
Sbjct: 781 DARQFLILVVDDEPVNRQVIVNHLSVHSYRVTQASNGPEALAMLS----------NGLLP 830
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQN 127
DLI+ D MP MTGYE+ ++++ P Y+ IV L +N
Sbjct: 831 DLILLDVMMPRMTGYEVCRQVREQHP---AYALPIVMLTAKN 869
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 53/192 (27%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
+S +G++ P ++ VL V+D R V+ LL +V +G +A L D
Sbjct: 26 LSQRGEGWENLPP-YRQLKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLL--D 82
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFI 132
+ ++DL++TD MPG++G LL KI + N Q
Sbjct: 83 DRNR-------EIDLVLTDVVMPGLSGLGLLSKI-------------MHHKNHQ------ 116
Query: 133 LSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 192
++PVV+MSS + + +CL GA DF+VKPV+ ++
Sbjct: 117 ------------------------KVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKNE 152
Query: 193 VKRIKDYLTRDV 204
+K + + R
Sbjct: 153 LKNLWQHAWRKA 164
>gi|428311538|ref|YP_007122515.1| signal transduction histidine kinase [Microcoleus sp. PCC 7113]
gi|428253150|gb|AFZ19109.1| signal transduction histidine kinase [Microcoleus sp. PCC 7113]
Length = 1099
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 55/180 (30%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
L+P++ + +L VDD V+ +V+ L++ + +T +G AL+ +
Sbjct: 686 LAPAN-KGFQILIVDDEPVNLQVLVNHLSLQNYAITQAANGMEALELID----------R 734
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
G K DLI+ D MP MTGYEL +KI+
Sbjct: 735 GFKPDLILLDIMMPKMTGYELCQKIRER-------------------------------- 762
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYL 200
FP+N E+PVV+++++N ++ + GA D++ KPV K + RIK ++
Sbjct: 763 -FPAN----------ELPVVLLTAKNQVSDLVEGFSAGANDYLTKPVLKNELLARIKTHI 811
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 53/181 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL + R VI LL V A G +A + L +E+S N +DL++
Sbjct: 39 VRVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAWEIL---KEKSFN------IDLVL 89
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P M+G+ L STI+
Sbjct: 90 TEVELPAMSGF-------------LLLSTIM----------------------------- 107
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
+ A + IPV++MSS + ++ + +C+ GA DF+VKP++ ++++ + ++ R L N
Sbjct: 108 -EHEACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK-QLSNG 165
Query: 210 G 210
G
Sbjct: 166 G 166
>gi|410593829|ref|YP_006950556.1| Heme response regulator hssR [Streptococcus agalactiae SA20-06]
gi|421532302|ref|ZP_15978667.1| DNA-binding response regulator [Streptococcus agalactiae
STIR-CD-17]
gi|403642475|gb|EJZ03317.1| DNA-binding response regulator [Streptococcus agalactiae
STIR-CD-17]
gi|410517468|gb|AFV71612.1| Heme response regulator hssR [Streptococcus agalactiae SA20-06]
Length = 164
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 57/174 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+D+ V +K+I LT + +G+ AL N D +V LII
Sbjct: 2 IKILVVEDNIVQQKIITTKLTQEGYQFITASNGQEAL-----------NCLDTEEVQLII 50
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M GY+L+++++
Sbjct: 51 TDIMMPMMDGYQLIQELR------------------------------------------ 68
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLTR 202
SA +P+++M++++ + + + GA+D++VKPV+L ++ RIK L R
Sbjct: 69 ---SAAYNVPIIVMTAKSQMEDMTKGFGLGADDYMVKPVQLQELALRIKALLRR 119
>gi|157376078|ref|YP_001474678.1| response regulator receiver modulated serine phosphatase
[Shewanella sediminis HAW-EB3]
gi|157318452|gb|ABV37550.1| response regulator receiver modulated serine phosphatase
[Shewanella sediminis HAW-EB3]
Length = 470
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
TE + VL V+D+ +R I LL + KVT+ SG E++I + K
Sbjct: 15 QTEGLSVLVVEDTHSERCFITHLLEMMGLKVTSCSSG-----------EEAIESYQQEKA 63
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQN 127
D+II+D+ MPGMTG EL + +K P S I+ L N
Sbjct: 64 DMIISDWRMPGMTGPELCQYLKNIDP-----SLYIILLTANN 100
>gi|374603703|ref|ZP_09676679.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
gi|374390674|gb|EHQ62020.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
Length = 995
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 55/173 (31%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+H+LAVDD V+ V+ +L+ +T V S R L+ LG + DL+I
Sbjct: 667 IHILAVDDDPVNLNVLVGILSTEPYTITTVQSAREVLELLGTQQ-----------WDLLI 715
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MP M+GYEL ++++
Sbjct: 716 ADVMMPHMSGYELTQRVR------------------------------------------ 733
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLT 201
+ ++ E+P++++++ + A I GA D++ KPV ++K RIK T
Sbjct: 734 -EHYSVSELPILLLTARSQPADIYTGFSAGANDYVTKPVDALELKSRIKALTT 785
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V+ R+V+ LL +V AV G +A G+ E++ DL++T+
Sbjct: 46 VLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAW---GVMRERA------YAFDLVLTE 96
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G ELL +I
Sbjct: 97 VTMPTLSGIELLSRIVA------------------------------------------- 113
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
S + IPV++MSS++ + + RC++ GA DF+VKPV+ ++++ + ++ R
Sbjct: 114 SDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVWR 164
>gi|334340222|ref|YP_004545202.1| PAS sensor protein [Desulfotomaculum ruminis DSM 2154]
gi|334091576|gb|AEG59916.1| PAS sensor protein [Desulfotomaculum ruminis DSM 2154]
Length = 1276
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 58/188 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V+VL V+D+ ++K+IE LLT KVT V++G+ AL L D + D+++
Sbjct: 1053 VNVLLVEDNSFNQKLIEHLLTGDGYKVTMVENGQEALAAL-----------DQGEYDIVL 1101
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MP M GYE ++I+ N+E
Sbjct: 1102 MDMQMPVMDGYEATRQIR---------------------------------------NME 1122
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYLTRDVNLGN 208
+ +++PV+ +++ + ++CL G +D++ KPV K +K IK + +
Sbjct: 1123 K----YKKLPVIALTAHAMKGDCEKCLSAGCDDYLAKPVNKDMLIKTIKKFTD---SPAE 1175
Query: 209 EGRGINKR 216
E RG R
Sbjct: 1176 ESRGKKTR 1183
Score = 38.1 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 62/162 (38%), Gaps = 57/162 (35%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
T E VL ++D + +++I L + V A D G++AL + + D
Sbjct: 791 TREGVVLVIEDDWTTKQLITNYLEKAGYTVIATDHGKQALTLAKI-----------YQPD 839
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
II D +P ++G+++L K+K T
Sbjct: 840 AIILDILLPDLSGWDILVKMKKT------------------------------------- 862
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+++IPV++ S +L +R GA D+I KP+
Sbjct: 863 ------EEIQQIPVIVCS---VLPEKERAFSLGAVDYIEKPI 895
>gi|361129951|gb|EHL01827.1| putative Hybrid signal transduction histidine kinase K [Glarea
lozoyensis 74030]
Length = 474
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%), Gaps = 54/207 (26%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL-------GLDEEQSINGFDGL 83
HVL V+D+ V++KV+ + L + C V + GR AL+FL GL++E G+
Sbjct: 308 HVLVVEDNLVNQKVLSKQLRAAGCIVAVANHGREALEFLQTTHFWTGLEDE-------GV 360
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
K+ +++ D MP M G ++KI+
Sbjct: 361 KLSIVLMDLEMPVMDGLTCVQKIR------------------------------------ 384
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRD 203
L+++ +PV+ +++ +I E G + + KP ++ ++ D + R
Sbjct: 385 ---ELQKEGKMTSHVPVIAVTANARSEQIANAKEHGMDSVVTKPFRIPELLPEMDRVLRR 441
Query: 204 VNLGNEGRGINKRKARESCDLSSSPPS 230
G + + +R R+ C + PS
Sbjct: 442 AR-GEDRPVVGERSLRKHCTSDLNEPS 467
>gi|392423698|ref|YP_006464692.1| signal transduction histidine kinase [Desulfosporosinus acidiphilus
SJ4]
gi|391353661|gb|AFM39360.1| signal transduction histidine kinase [Desulfosporosinus acidiphilus
SJ4]
Length = 914
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL-GLDEEQSING 79
DL + E +++L VDD+ +R + L ++CKV +V++GR L+ L GL +E
Sbjct: 635 DLQSTSLEGLNLLIVDDNESNRMIFREYLKETNCKVMSVNNGREGLEILKGLGDENL--- 691
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
+I+ DY MP MTG E KK+K F +
Sbjct: 692 -----PQIILVDYMMPEMTGIEFGKKVKEIERFKHI 722
>gi|34496645|ref|NP_900860.1| sensor/response regulator hybrid [Chromobacterium violaceum ATCC
12472]
gi|34330304|gb|AAQ58865.2| probable sensor/response regulator hybrid [Chromobacterium
violaceum ATCC 12472]
Length = 1105
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 52/158 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L VDDS ++R+V +R+ V + G+ AL +LGL G +VD+++
Sbjct: 777 LRLLVVDDSDINREVAQRIFEDEGASVALANDGKEALDWLGL---------HGGEVDIVL 827
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MP M GYE + I+ T
Sbjct: 828 MDVQMPVMDGYEATRAIRAT---------------------------------------- 847
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
AL +PVV +++ LA+ D E G D+I KP
Sbjct: 848 ---PALAHLPVVALTAGAFLAQQDAAREAGMSDYIAKP 882
Score = 37.4 bits (85), Expect = 6.8, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQ--FLGLDEEQS 76
G LS + +++VL DD+ + R+ + + KV +V+SGR A++ LD +Q+
Sbjct: 624 GIRLSSPEMADLNVLIADDNPIARETLGVTASELGWKVRSVESGRLAVEKVMAMLDGDQA 683
Query: 77 INGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
VD+++ D+ MP M G + I+
Sbjct: 684 --------VDVVVLDWKMPDMDGLAAAQAIR 706
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 64/223 (28%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD + KV+E++L KVTA + + AL+ L +E+ D++++D
Sbjct: 7 VLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEE---------FDIVLSD 57
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M G++LL+ I+ F L+
Sbjct: 58 VHMPDMDGFKLLEIIQ-----------------------FELA----------------- 77
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGR 211
+PV++MS+ + + + R + GA D+++KPV++ +++ I ++ R R
Sbjct: 78 ------LPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHVVR--------R 123
Query: 212 GINKRKARESCDLSSSPPSVITSSSSPSSPSSPF-RSPSILSS 253
+ K+ S D+ +S PS +S +S S R+ S +SS
Sbjct: 124 DYSSAKSSGSEDVEASSPSKRAKTSGSNSKSEEVDRTASEMSS 166
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+D R V+ LL + +VT V +G A GL EE + N DL++
Sbjct: 306 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAW---GLLEEANSN------FDLVL 356
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP ++G LL K+
Sbjct: 357 TDVVMPYLSGVGLLSKM------------------------------------------- 373
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
A + +P+VIMSS + L + RCL GA D++VKPV+ +++K + ++ R
Sbjct: 374 MKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVWR 426
>gi|186473153|ref|YP_001860495.1| response regulator receiver protein [Burkholderia phymatum STM815]
gi|184195485|gb|ACC73449.1| response regulator receiver protein [Burkholderia phymatum STM815]
Length = 706
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 23/114 (20%)
Query: 8 ASLRLISDEIDGFDLSPSDTE---EVHV---------LAVDDSFVDRKVIERLLTISSCK 55
A+LR I D G D P+ + VHV L VDD+ V+RKV+ R L + +
Sbjct: 428 AALRRICDAHGGADDKPAVHDVPLRVHVRPPSNRPNILVVDDNDVNRKVLARQLDVLGYR 487
Query: 56 VTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVT 109
+ SG AL L +VDL+ITD MPGM+G EL ++++ +
Sbjct: 488 CVSASSGEEALGVLRRG-----------RVDLLITDLQMPGMSGVELARRVRAS 530
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
++VL V+ R+V+ LL +V + ++G++A +L E++ N +D+++
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---EDKQNN------IDIVL 130
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ MPG++G LL +I +IC
Sbjct: 131 IEVFMPGVSGISLLSRI------------------------MSHNIC------------- 153
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 154 ------KNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 200
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
++VL V+ R+V+ LL +V + ++G++A +L E++ N +D+++
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---EDKQNN------IDIVL 130
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ MPG++G LL +I +IC
Sbjct: 131 IEVFMPGVSGISLLSRI------------------------MSHNIC------------- 153
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 154 ------KNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 200
>gi|339496246|ref|YP_004716539.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|338803618|gb|AEJ07450.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 801
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
S + + +L VDD R+V ++L VT +SG ALQ L DG
Sbjct: 674 SHDENSQHRILLVDDDHSVREVTAQMLENLGFAVTEAESGDHALQLL----------RDG 723
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTP 111
VDL++ D+ MPGM G EL + ++V P
Sbjct: 724 AAVDLLLADFAMPGMNGGELARAVRVRRP 752
>gi|146284495|ref|YP_001174648.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri A1501]
gi|145572700|gb|ABP81806.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri A1501]
Length = 801
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
S + + +L VDD R+V ++L VT +SG ALQ L DG
Sbjct: 674 SHDENSQHRILLVDDDHSVREVTAQMLENLGFAVTEAESGDHALQLL----------RDG 723
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTP 111
VDL++ D+ MPGM G EL + ++V P
Sbjct: 724 AAVDLLLADFAMPGMNGGELARAVRVRRP 752
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
++VL V+ R+V+ LL +V + ++G++A +L E++ N +D+++
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---EDKQNN------IDIVL 130
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ MPG++G LL +I +IC
Sbjct: 131 IEVFMPGVSGISLLSRI------------------------MSHNIC------------- 153
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 154 ------KNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 200
>gi|407687435|ref|YP_006802608.1| sensor protein [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407290815|gb|AFT95127.1| putative sensor protein [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 1260
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 52/210 (24%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E ++L VDD+ ++R+V + +L K+ G + FL E + G ++
Sbjct: 919 ENANLLIVDDNMINREVAKGVLESLPVKLFTCSDGEEVVAFLTKCESK------GRRIHS 972
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
I+ D MP M GY+ + I+
Sbjct: 973 ILMDCQMPNMNGYDATRAIR---------------------------------------- 992
Query: 148 LEQDSSAL-REIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV--KRIKDYLTRDV 204
E + A+ +++P++ M++ +L ++CLE G +DF KPV ++DV ++K +L +
Sbjct: 993 -EGKAGAMHKDVPIIAMTANAMLGEKEKCLEAGMDDFATKPV-MADVLIPKVKQWLVHQI 1050
Query: 205 NLGNEGRGINKRKARESCDLSSSPPSVITS 234
+ +N R S +++S P ++ S
Sbjct: 1051 TVLASAE-LNDTDTRSSTGITASEPPLVDS 1079
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VLAVDD V K++ER L + T V R AL L +E G + DL+I
Sbjct: 10 LRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKE-------GNQFDLVI 62
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+D MP M G++LL+ I LE
Sbjct: 63 SDVIMPNMDGFKLLELI----------------------------------------GLE 82
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRD 203
D +PV+++S+ + I + ++ GA D++VKPV+L ++ I ++ ++
Sbjct: 83 MD------LPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGIWTHVVKN 130
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+D R V+ LL + +VT V +G A GL EE + N DL++
Sbjct: 186 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAW---GLLEEANSN------FDLVL 236
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP ++G LL K+
Sbjct: 237 TDVVMPYLSGVGLLSKM------------------------------------------- 253
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
A + +P+VIMSS + L + RCL GA D++VKPV+ +++K + ++ R
Sbjct: 254 MKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVWR 306
>gi|254513978|ref|ZP_05126039.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
gi|219676221|gb|EED32586.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
Length = 496
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 54/156 (34%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+LAVDD +R+++ R LT S V G AL+ L VD+++ D
Sbjct: 144 ILAVDDREENRELLARYLTRSGHFVVTAPGGAEALEMLA-----------NADVDVVLLD 192
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM G E+L++IK
Sbjct: 193 RMMPGMDGREVLRRIKA------------------------------------------- 209
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
LR PV+++S E + I C+E GA+D++ KP
Sbjct: 210 EPKLRATPVIMISGEQDMQGIIECIEAGADDYLFKP 245
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+H+L VDD RKV++ LL+ VT V S A L + K DL++
Sbjct: 145 IHILVVDDDITQRKVLQNLLSKVFYNVTLVSSAEEAWNML---------IYGTTKFDLVL 195
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP +TG++LL++I
Sbjct: 196 TDVMMPQVTGFDLLQRIN------------------------------------------ 213
Query: 150 QDSSALREIPVVIMSSENILARI-DRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ ++ IPV++MS + + + ++ G +DF+ KP+ +K+ D L R
Sbjct: 214 -EHPEIKNIPVILMSGTALDCKYANDTIKIGGQDFVTKPIAKELLKKKIDILLR 266
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 29/173 (16%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HV+ V+D + KV+E+LL S +V+ G AL+ L D +Q G KVDLI+T
Sbjct: 7 HVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVL-ADCKQR-----GDKVDLILT 60
Query: 91 DYCMPGMTGYELLKKIKVTTPF-NFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MP +TG++L+ ++ F + FL + ++ C
Sbjct: 61 DILMPEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRC----------- 109
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+MSS++ + + + GA D+++KP++ +++ + ++ R
Sbjct: 110 -----------QVMSSQDSQESVLQAFQAGAADYLIKPIRKNELATLWQHVWR 151
>gi|429334014|ref|ZP_19214694.1| response regulator receiver protein [Pseudomonas putida CSV86]
gi|428761270|gb|EKX83504.1| response regulator receiver protein [Pseudomonas putida CSV86]
Length = 134
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE-EQSINGFDGLKVDLIIT 90
VL VDD +V ++E +L + +V +G AL+ L D+ E + + ++V+L+IT
Sbjct: 4 VLVVDDEYVICDILEFILEEAGYQVKKASNGLGALKILKPDQHENAEEPQEKIRVELLIT 63
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFL 115
DY MP M G EL +K++V FN L
Sbjct: 64 DYMMPLMNGEELARKLRVDPQFNTL 88
>gi|220933691|ref|YP_002512590.1| adenylate/guanylate cyclase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995001|gb|ACL71603.1| adenylate/guanylate cyclase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 380
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V+R ++ R L + +V DSG +ALQ L EQS++G ++ D
Sbjct: 28 LLVVDDQEVNRLILARHLELLGHRVLQADSGPQALQIL---REQSVDG--------VVLD 76
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQ 126
M GM GYE+ ++IK F+ ++ LN Q
Sbjct: 77 VVMRGMDGYEVCRRIKADPETWFIPVVMVTVLNNQ 111
>gi|398797682|ref|ZP_10557002.1| signal transduction histidine kinase [Pantoea sp. GM01]
gi|398102408|gb|EJL92589.1| signal transduction histidine kinase [Pantoea sp. GM01]
Length = 1195
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 22 LSPSDTEE-VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
LS D E +HVL VDD +R ++ + L + +V A +SG +AL+ L
Sbjct: 950 LSADDDERSMHVLIVDDHSPNRLLLTQQLEMMGHQVIAAESGEQALEIL----------H 999
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIK 107
G+ +DLI TD MPGM G+EL + I+
Sbjct: 1000 SGVAIDLITTDVTMPGMDGFELTRHIR 1026
>gi|374578742|ref|ZP_09651836.1| putative regulator of cell autolysis [Desulfosporosinus youngiae
DSM 17734]
gi|374414824|gb|EHQ87259.1| putative regulator of cell autolysis [Desulfosporosinus youngiae
DSM 17734]
Length = 1020
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 73/187 (39%), Gaps = 66/187 (35%)
Query: 20 FDLSPSDTEE-----------VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQF 68
+DLSPS T E +LAVDD + + K + +LT+ VT + + AL
Sbjct: 670 YDLSPSLTYEKLPHTVNVGSKFSILAVDDEYSNLKALLNMLTVCQYNVTVAGNAKSALLL 729
Query: 69 LGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK-VTTPFNFLYSTIIVFLNLQN 127
L L+ DL I D MPGM GYE +KI+ V +P
Sbjct: 730 LK----------GALQYDLCILDVMMPGMDGYEACRKIREVYSPL--------------- 764
Query: 128 LFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
E+P+++++++ + ++ GA DFI KP
Sbjct: 765 -----------------------------ELPILLLTAKALPDELEAGFRAGANDFIAKP 795
Query: 188 VKLSDVK 194
+ ++K
Sbjct: 796 FEARELK 802
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 53/181 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL + R VI LL +V A G +A L +E+S N VDL++
Sbjct: 43 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLL---KEKSFN------VDLVL 93
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P M+G+ L STI +E
Sbjct: 94 TEVELPLMSGF-------------LLLSTI----------------------------ME 112
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
D+S + IPV++MSS + ++ + +C+ GA DF+VKP++ ++++ + ++ R L N
Sbjct: 113 HDAS--KNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRK-QLANG 169
Query: 210 G 210
G
Sbjct: 170 G 170
>gi|153867938|ref|ZP_01998111.1| two component system response regulator [Beggiatoa sp. SS]
gi|152144742|gb|EDN71889.1| two component system response regulator [Beggiatoa sp. SS]
Length = 258
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+LAVDD V+ +V+ LL++ + V V G + L EQ G K DLI+ D
Sbjct: 26 ILAVDDEPVNLQVVTNLLSLENYTVKTVMGGAETFELL----EQ------GEKPDLILLD 75
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP MTGYE+ +K++ EQ
Sbjct: 76 IMMPKMTGYEVCQKLR-----------------------------------------EQY 94
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
S+ E+P+++++++N ++ + L GA D+I KPV ++ + RIK +L
Sbjct: 95 SAT--ELPIMLLTAKNQVSDLVEGLNVGANDYITKPVSKNELLARIKTHL 142
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 57/192 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VLAVDD+ V K++ LL KVTA AL+ L + E D++I
Sbjct: 19 LRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENREN---------FDIVI 69
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M G+ LLK I LE
Sbjct: 70 TDVKMPDMDGFTLLKII----------------------------------------GLE 89
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
D IPV++ S + + + + + GA D+++KPV++ ++K I ++ R NL +
Sbjct: 90 MD------IPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHVVRK-NLFDS 142
Query: 210 GR-GINKRKARE 220
G+ G+ + KA E
Sbjct: 143 GKPGVKEEKAME 154
>gi|255534918|ref|YP_003095289.1| PAS/PAC domain protein [Flavobacteriaceae bacterium 3519-10]
gi|255341114|gb|ACU07227.1| PAS/PAC domain protein [Flavobacteriaceae bacterium 3519-10]
Length = 915
Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 12/96 (12%)
Query: 16 EIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ 75
E + +DLS +D + V L VDD+ +RK+++R+L + +V DSG +AL +
Sbjct: 632 EEEEYDLSLTDIKRV--LIVDDNENNRKILKRMLERKNIEVVECDSGLKALLLI------ 683
Query: 76 SINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTP 111
D + D+II DY MP M G E ++K+K TP
Sbjct: 684 ----MDKSEFDVIIMDYHMPIMDGIETIRKMKDITP 715
>gi|302409538|ref|XP_003002603.1| ethylene receptor [Verticillium albo-atrum VaMs.102]
gi|261358636|gb|EEY21064.1| ethylene receptor [Verticillium albo-atrum VaMs.102]
Length = 1373
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 44/175 (25%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
DL S+ ++HVL V+D+ +++++ + + V AV +G+ AL +L ++
Sbjct: 1064 DLPASERSKIHVLVVEDNAINQQIATKTIMKLGFSVVAVWNGKEALDYLVAAQQGKKT-- 1121
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
K D+I+ D MP + GY+ ++ P+ S
Sbjct: 1122 ---KPDIILMDVQMPVIDGYKCTHLLRRHAPYKTFVS----------------------- 1155
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
+IP+V M++ I ++C + G +D++ KPVK ++R
Sbjct: 1156 ----------------DIPIVAMTASAIQGDREKCRKAGMDDYLAKPVKGKTLER 1194
>gi|386022911|ref|YP_005940936.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri DSM 4166]
gi|327482884|gb|AEA86194.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri DSM 4166]
Length = 801
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD R+V ++L VT +SG ALQ L DG VDL++ D
Sbjct: 683 ILLVDDDHSVREVTAQMLENLGFAVTEAESGDHALQLL----------RDGAAVDLLLAD 732
Query: 92 YCMPGMTGYELLKKIKVTTP 111
+ MPGM G EL + ++V P
Sbjct: 733 FAMPGMNGGELARAVRVRRP 752
>gi|392951366|ref|ZP_10316921.1| hypothetical protein WQQ_09930 [Hydrocarboniphaga effusa AP103]
gi|391860328|gb|EIT70856.1| hypothetical protein WQQ_09930 [Hydrocarboniphaga effusa AP103]
Length = 1327
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
D+ D + VL VDD R++IE L +V +VDSG AL+ + EEQ
Sbjct: 1195 DVRAVDLSGLRVLVVDDDRDARELIEHALADCGAEVLSVDSGAEALRVI---EEQ----- 1246
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIK 107
+ L+I+D MPGM GYELL++++
Sbjct: 1247 ---RPQLLISDIGMPGMDGYELLRRVR 1270
>gi|339302489|ref|ZP_08651538.1| DNA-binding response regulator [Streptococcus agalactiae ATCC
13813]
gi|319744078|gb|EFV96455.1| DNA-binding response regulator [Streptococcus agalactiae ATCC
13813]
Length = 223
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 57/174 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+D+ V +K+I LT + +G+ AL N D +V LII
Sbjct: 2 IKILVVEDNIVQQKIITTKLTQEGYQFITASNGQEAL-----------NCLDTEEVQLII 50
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M GY+L+++++
Sbjct: 51 TDIMMPMMDGYQLIQELR------------------------------------------ 68
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLTR 202
SA +P+++M++++ + + + GA+D++VKPV+L ++ RIK L R
Sbjct: 69 ---SAAYNVPIIVMTAKSQMEDMTKGFGLGADDYMVKPVQLQELALRIKALLRR 119
>gi|346972197|gb|EGY15649.1| two-component system protein A [Verticillium dahliae VdLs.17]
Length = 1374
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 44/175 (25%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
DL S+ ++HVL V+D+ +++++ + + V AV +G+ AL +L ++
Sbjct: 1065 DLPASERSKIHVLVVEDNAINQQIATKTIMKLGFSVVAVWNGKEALDYLVAAQQGKKT-- 1122
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
K D+I+ D MP + GY+ ++ P+ S
Sbjct: 1123 ---KPDIILMDVQMPVIDGYKCTHLLRRHAPYKTFVS----------------------- 1156
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
+IP+V M++ I ++C + G +D++ KPVK ++R
Sbjct: 1157 ----------------DIPIVAMTASAIQGDREKCKKAGMDDYLAKPVKGKTLER 1195
>gi|22536308|ref|NP_687159.1| DNA-binding response regulator [Streptococcus agalactiae 2603V/R]
gi|77412156|ref|ZP_00788478.1| DNA-binding response regulator [Streptococcus agalactiae CJB111]
gi|417004187|ref|ZP_11942920.1| DNA-binding response regulator [Streptococcus agalactiae FSL
S3-026]
gi|22533130|gb|AAM99031.1|AE014196_27 DNA-binding response regulator [Streptococcus agalactiae 2603V/R]
gi|77161774|gb|EAO72763.1| DNA-binding response regulator [Streptococcus agalactiae CJB111]
gi|341577986|gb|EGS28383.1| DNA-binding response regulator [Streptococcus agalactiae FSL
S3-026]
Length = 223
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 57/174 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+D+ V +K+I LT + +G+ AL N D +V LII
Sbjct: 2 IKILVVEDNIVQQKIITTKLTQEGYQFITASNGQEAL-----------NCLDTEEVQLII 50
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M GY+L+++++
Sbjct: 51 TDIMMPMMDGYQLIQELR------------------------------------------ 68
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLTR 202
SA +P+++M++++ + + + GA+D++VKPV+L ++ RIK L R
Sbjct: 69 ---SAAYNVPIIVMTAKSQMEDMTKGFGLGADDYMVKPVQLQELALRIKALLRR 119
>gi|332664922|ref|YP_004447710.1| guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332333736|gb|AEE50837.1| adenylate/guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1603
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 55/190 (28%)
Query: 12 LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL 71
++ + G +L SD VH+L VDD ++++V++ L+ +T+ +G AL+ L
Sbjct: 1174 VVQNGTKGLELLQSDAP-VHILVVDDEPINQQVLKSHLSALKYDITSALNGEDALKALS- 1231
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLF 131
+G DL++ D MP M+GYE+ ++I+
Sbjct: 1232 ---------NGKHFDLVLLDVMMPRMSGYEVCEQIRKK---------------------- 1260
Query: 132 ILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 191
F PS E+PV++++++N + + L GA D+I KP
Sbjct: 1261 ----------FLPS-----------ELPVIMITAKNQVQDLVHGLNTGANDYITKPFTKD 1299
Query: 192 D-VKRIKDYL 200
+ + R+K +L
Sbjct: 1300 EFLARVKTHL 1309
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 62/219 (28%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V+ R++I LL S KV AV G +A + L +DLI+T+
Sbjct: 46 VLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPH---------NIDLILTE 96
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+P ++GY LL + IC
Sbjct: 97 VELPSISGYALL------------------------TLIMEHEIC--------------- 117
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGR 211
+ IPV++MSS++ ++ + +C+ GA D++VKP++ ++++ + ++ R
Sbjct: 118 ----KNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKNELRNLWQHVWRR-------- 165
Query: 212 GINKRKARESCDLSSSPPSVITSSSSPSSPSSPFRSPSI 250
ARE+C S ++S ++P S S +
Sbjct: 166 --QSSLARENCPQEESVGQDTAEATSENNPESNHSSGDV 202
>gi|25010196|ref|NP_734591.1| DNA-binding response regulator [Streptococcus agalactiae NEM316]
gi|76786780|ref|YP_328847.1| DNA-binding response regulator [Streptococcus agalactiae A909]
gi|77409199|ref|ZP_00785910.1| DNA-binding response regulator [Streptococcus agalactiae COH1]
gi|77414552|ref|ZP_00790696.1| DNA-binding response regulator [Streptococcus agalactiae 515]
gi|406708645|ref|YP_006763371.1| DNA-binding response regulator [Streptococcus agalactiae
GD201008-001]
gi|421146582|ref|ZP_15606291.1| DNA-binding response regulator [Streptococcus agalactiae GB00112]
gi|424050134|ref|ZP_17787683.1| DNA-binding response regulator [Streptococcus agalactiae ZQ0910]
gi|23094547|emb|CAD45766.1| Unknown [Streptococcus agalactiae NEM316]
gi|76561837|gb|ABA44421.1| DNA-binding response regulator [Streptococcus agalactiae A909]
gi|77159393|gb|EAO70560.1| DNA-binding response regulator [Streptococcus agalactiae 515]
gi|77172207|gb|EAO75365.1| DNA-binding response regulator [Streptococcus agalactiae COH1]
gi|389648363|gb|EIM69871.1| DNA-binding response regulator [Streptococcus agalactiae ZQ0910]
gi|401686771|gb|EJS82742.1| DNA-binding response regulator [Streptococcus agalactiae GB00112]
gi|406649530|gb|AFS44931.1| DNA-binding response regulator [Streptococcus agalactiae
GD201008-001]
Length = 223
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 57/174 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+D+ V +K+I LT + +G+ AL N D +V LII
Sbjct: 2 IKILVVEDNIVQQKIITTKLTQEGYQFITASNGQEAL-----------NCLDTEEVQLII 50
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M GY+L+++++
Sbjct: 51 TDIMMPMMDGYQLIQELR------------------------------------------ 68
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLTR 202
SA +P+++M++++ + + + GA+D++VKPV+L ++ RIK L R
Sbjct: 69 ---SAAYNVPIIVMTAKSQMEDMTKGFGLGADDYMVKPVQLQELALRIKALLRR 119
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 54/186 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R++I LL S KV AV G A + L +E+S ++DLI+
Sbjct: 26 LKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETL---KEKSN------EIDLIL 76
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P ++G+ LL L
Sbjct: 77 TELDLPAISGFALLA-------------------------------------------LV 93
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNL--G 207
+ A + IPV++MSSE+ + + +C+ GA D+++KP++ +++K + ++ R + + G
Sbjct: 94 MEHEACKNIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKNELKNLWQHVWRRLAVRDG 153
Query: 208 NEGRGI 213
+ G G+
Sbjct: 154 HNGHGL 159
>gi|330936571|ref|XP_003305441.1| hypothetical protein PTT_18287 [Pyrenophora teres f. teres 0-1]
gi|311317524|gb|EFQ86457.1| hypothetical protein PTT_18287 [Pyrenophora teres f. teres 0-1]
Length = 1259
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 44/181 (24%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN-GFDG 82
P + +HVL V+D+ V++KV+ + LT + C V+ D+G AL+ L E+ ++ +G
Sbjct: 1118 PPNEACLHVLVVEDNLVNQKVLCKQLTKAGCNVSTADNGVWALKHL---EKTNLRVDTNG 1174
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
+ + +I+ D MP M G +KI+
Sbjct: 1175 IPLSIILIDCEMPEMDGLTCCRKIR----------------------------------- 1199
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYLT 201
+EQ+ + +P++ +++ +ID E G ++ I KP ++ D + ++K L
Sbjct: 1200 ----EMEQNGKLTKHVPIIAVTANIRGGQIDTAKEAGMDEVIGKPFRIPDLLAKMKGLLE 1255
Query: 202 R 202
R
Sbjct: 1256 R 1256
>gi|427723530|ref|YP_007070807.1| adenylate/guanylate cyclase with integral membrane sensor
[Leptolyngbya sp. PCC 7376]
gi|427355250|gb|AFY37973.1| adenylate/guanylate cyclase with integral membrane sensor
[Leptolyngbya sp. PCC 7376]
Length = 1278
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 59/196 (30%)
Query: 11 RLISDEIDGFDLSP----SDTEEVH-VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRA 65
RL+ D GF P +D EE + +L VDD V+ +V+ L++ + +G A
Sbjct: 707 RLVGDAERGFLTDPETLRADHEERYSILIVDDEPVNVQVLVNHLSLQDYAIAQASNGIEA 766
Query: 66 LQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNL 125
LQ + G+K D+++ D MP MTGYE+ KK++
Sbjct: 767 LQLIE----------SGIKPDIVLLDIMMPRMTGYEVCKKLR------------------ 798
Query: 126 QNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIV 185
+ +L E+PVV+++++N + + GA D++
Sbjct: 799 -------------------------EKYSLDELPVVMLTAKNQVNDLVAGFNCGANDYLT 833
Query: 186 KPVKLSD-VKRIKDYL 200
KP+ ++ + RIK +L
Sbjct: 834 KPISKTELLARIKTHL 849
>gi|302923768|ref|XP_003053746.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734687|gb|EEU48033.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1371
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 46/170 (27%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL-GLDEEQSING 79
+L PS+ ++H+L V+D+ +++K+ + + +VTA +G+ AL++L G+ Q I
Sbjct: 1095 ELPPSERAKIHILVVEDNPINQKIATKTIGRLGFQVTAAWNGKEALEYLSGV--HQGIK- 1151
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
K D+I+ D MP + GY+ ++ P+ +
Sbjct: 1152 ---PKPDIILMDVQMPIIDGYKCTHLLRHHLPYKPI------------------------ 1184
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
++++P+V M++ I ++C G +D++ KPV+
Sbjct: 1185 ---------------VQDVPIVAMTASAIQGDREKCTRAGMDDYLAKPVR 1219
>gi|153870385|ref|ZP_01999797.1| Response regulator receiver protein [Beggiatoa sp. PS]
gi|152073147|gb|EDN70201.1| Response regulator receiver protein [Beggiatoa sp. PS]
Length = 855
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 56/181 (30%)
Query: 23 SPSDTEE--VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
SP + E +L VDD V+ V+ L+++ SGR AL L EE
Sbjct: 552 SPQEEESDVFKILIVDDEAVNLHVLANHLSLNHYATIQAASGREALSIL---EE------ 602
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
GL DLI+ D MP MTGYE+ +KI+ N
Sbjct: 603 -GLIPDLILLDVMMPHMTGYEVTQKIREHWEAN--------------------------- 634
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDY 199
E+P+V+++++N ++ + LE GA D+++KP+ ++ + RIK +
Sbjct: 635 ----------------ELPIVLLTAKNQVSDLVMGLEVGANDYLIKPISKNELLARIKTH 678
Query: 200 L 200
L
Sbjct: 679 L 679
>gi|220906186|ref|YP_002481497.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
gi|219862797|gb|ACL43136.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
Length = 406
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 54/156 (34%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD+ ++R ++ R L V ++G++ALQ L E QS DL++ D
Sbjct: 176 ILVVDDTLINRDLLSRRLERQGHTVKLSENGQQALQLL---ESQSF--------DLVLLD 224
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M G ELL+ +K D
Sbjct: 225 VIMPKMNGLELLRLMK-------------------------------------------D 241
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+ ++IPV+++S+ + + RC+E GAED++ KP
Sbjct: 242 TPNWKDIPVIMISALDEVESAVRCIELGAEDYLTKP 277
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 56/177 (31%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
SPS +VH+L VDD V RK++E L VT V +G A L ING
Sbjct: 177 SPS---KVHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNIL-------ING--N 224
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
K DL++TD MP ++G++LL++I
Sbjct: 225 TKYDLVLTDVMMPNISGFDLLQRI------------------------------------ 248
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILAR-IDRCLEDGAEDFIVKPVKLSDVKRIKD 198
D + ++ +PV++MS I + + ++ G +DF+ KP+ +K+ D
Sbjct: 249 -------NDHAEIKNVPVILMSGTAIDYKYANDTIKIGGQDFLTKPIAKELLKKKID 298
>gi|294507115|ref|YP_003571173.1| signal transduction histidine kinase [Salinibacter ruber M8]
gi|294343443|emb|CBH24221.1| Signal transduction histidine kinase [Salinibacter ruber M8]
Length = 659
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 15 DEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE 74
D +D P+ E V +L VDD + R + RLLT+S +V SG +AL+
Sbjct: 529 DPVDEPSDEPAAPEGVSILVVDDEEMVRSTVTRLLTLSGHEVDRAASGAKALEM------ 582
Query: 75 QSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTP 111
F D++ TD+ MP MTG EL +K P
Sbjct: 583 -----FSAGAYDIVFTDFGMPEMTGAELAHALKDEAP 614
>gi|407921335|gb|EKG14486.1| hypothetical protein MPH_08335 [Macrophomina phaseolina MS6]
Length = 357
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 42/175 (24%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
LS D +L DD+ ++R + RL++ V V+ GR AL FL E S N +
Sbjct: 214 LSDLDRAGKQILIADDNEINRHIALRLISKRGFSVNLVEDGRSALDFL---IESSDNEWR 270
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
+ DLI+ D MP M GYE + I+ F+ + P+
Sbjct: 271 --RPDLILMDLQMPRMDGYEATQAIRKGAMFDKM------------------------PW 304
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+R IP++ M++ I +C G DFI+KP++ + +I
Sbjct: 305 -------------VRGIPIIAMTASAIPEEEAKCRSSGMNDFILKPLRAESLDKI 346
>gi|332712429|ref|ZP_08432355.1| signal transduction histidine kinase [Moorea producens 3L]
gi|332348724|gb|EGJ28338.1| signal transduction histidine kinase [Moorea producens 3L]
Length = 1156
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 55/202 (27%)
Query: 1 MTTTNGVASLRLISDEIDGFD-LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAV 59
M +A + +++E F + +D+ + +L VDD V+R+VI L++ + +
Sbjct: 715 MLPIESIAPVPDLTNETPNFTGVLAADSGYIKILIVDDEPVNRQVISNYLSMENYAIATA 774
Query: 60 DSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
+G AL+ L G + DLI+ D MP MTGYE+ KI+
Sbjct: 775 TNGLEALEMLS----------TGFQPDLILLDVMMPRMTGYEVCAKIRQK---------- 814
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
F PS E+PV+++++ N ++ + G
Sbjct: 815 ----------------------FLPS-----------ELPVIMLTANNQISDLVEGFTFG 841
Query: 180 AEDFIVKPV-KLSDVKRIKDYL 200
D++ KP K + RIK +L
Sbjct: 842 VNDYLTKPCSKHELLARIKSHL 863
>gi|226357660|ref|YP_002787400.1| response regulator, CheY [Deinococcus deserti VCD115]
gi|226319651|gb|ACO47646.1| putative response regulator, CheY [Deinococcus deserti VCD115]
Length = 146
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 12/87 (13%)
Query: 31 HVLAVDDSFVDRKVIE-RLLTIS-SCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
H+L +DD+ +DR++ E LL ++ +T +SG +A+Q L + GL+ DLI
Sbjct: 14 HILLIDDNPLDRELTELALLEVAPGSSLTLAESGIQAMQLL----------WAGLRTDLI 63
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFL 115
+ D MPGM G+++L+ ++ T N +
Sbjct: 64 LLDVNMPGMHGFDVLQALRADTSLNHI 90
>gi|257129263|gb|ACV42481.1| putative adenylate/guanylate cyclase [Lyngbya majuscula 19L]
Length = 1156
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 55/202 (27%)
Query: 1 MTTTNGVASLRLISDEIDGFD-LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAV 59
M +A + +++E F + +D+ + +L VDD V+R+VI L++ + +
Sbjct: 715 MLPIESIAPVPDLTNETPNFTGVLAADSGYIKILIVDDEPVNRQVISNYLSMENYAIATA 774
Query: 60 DSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
+G AL+ L G + DLI+ D MP MTGYE+ KI+
Sbjct: 775 TNGLEALEMLS----------TGFQPDLILLDVMMPRMTGYEVCAKIRQK---------- 814
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
F PS E+PV+++++ N ++ + G
Sbjct: 815 ----------------------FLPS-----------ELPVIMLTANNQISDLVEGFTFG 841
Query: 180 AEDFIVKPV-KLSDVKRIKDYL 200
D++ KP K + RIK +L
Sbjct: 842 VNDYLTKPCSKHELLARIKSHL 863
>gi|83815508|ref|YP_445249.1| FixL-related histidine kinase [Salinibacter ruber DSM 13855]
gi|83756902|gb|ABC45015.1| FixL-related histidine kinase [Salinibacter ruber DSM 13855]
Length = 601
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 15 DEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE 74
D +D P+ E V +L VDD + R + RLLT+S +V SG +AL+
Sbjct: 471 DPVDEPSDEPAAPEGVSILVVDDEEMVRSTVTRLLTLSGHEVDRAASGAKALEM------ 524
Query: 75 QSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTP 111
F D++ TD+ MP MTG EL +K P
Sbjct: 525 -----FSAGAYDIVFTDFGMPEMTGAELAHALKDEAP 556
>gi|456735763|gb|EMF60489.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia EPM1]
Length = 910
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 52/159 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL DD +R V++RLL + KVT V+ G L L EQ+ D I
Sbjct: 647 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQA-------SYDAAI 695
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G +LLK+++V
Sbjct: 696 VDLHMPGMSGLDLLKQLRV----------------------------------------- 714
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+S + +PV+++S++ I RC + GA F+ KPV
Sbjct: 715 MQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 753
>gi|408822682|ref|ZP_11207572.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Pseudomonas geniculata N1]
Length = 910
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 52/159 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL DD +R V++RLL + KVT V+ G L L EQ+ D I
Sbjct: 647 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQA-------SYDAAI 695
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G +LLK+++V
Sbjct: 696 VDLHMPGMSGLDLLKQLRV----------------------------------------- 714
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+S + +PV+++S++ I RC + GA F+ KPV
Sbjct: 715 MQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 753
>gi|424668616|ref|ZP_18105641.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
gi|401068878|gb|EJP77402.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
Length = 907
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 52/159 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL DD +R V++RLL + KVT V+ G L L EQ+ D I
Sbjct: 644 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQA-------SYDAAI 692
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G +LLK+++V
Sbjct: 693 VDLHMPGMSGLDLLKQLRV----------------------------------------- 711
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+S + +PV+++S++ I RC + GA F+ KPV
Sbjct: 712 MQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 750
>gi|254521065|ref|ZP_05133120.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
gi|219718656|gb|EED37181.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
Length = 910
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 52/159 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL DD +R V++RLL + KVT V+ G L L EQ+ D I
Sbjct: 647 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQA-------SYDAAI 695
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G +LLK+++V
Sbjct: 696 VDLHMPGMSGLDLLKQLRV----------------------------------------- 714
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+S + +PV+++S++ I RC + GA F+ KPV
Sbjct: 715 MQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 753
>gi|190574186|ref|YP_001972031.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Stenotrophomonas maltophilia
K279a]
gi|190012108|emb|CAQ45731.1| putative histidine kinase/response regulator fusion protein,
regulation of pathogenicity factors [Stenotrophomonas
maltophilia K279a]
Length = 883
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 52/159 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL DD +R V++RLL + KVT V+ G L L EQ+ D I
Sbjct: 620 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQA-------SYDAAI 668
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G +LLK+++V
Sbjct: 669 VDLHMPGMSGLDLLKQLRV----------------------------------------- 687
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+S + +PV+++S++ I RC + GA F+ KPV
Sbjct: 688 MQASGMPYVPVMVLSADVTPESILRCEQAGARAFLAKPV 726
>gi|386817120|ref|ZP_10104338.1| integral membrane sensor hybrid histidine kinase [Thiothrix nivea
DSM 5205]
gi|386421696|gb|EIJ35531.1| integral membrane sensor hybrid histidine kinase [Thiothrix nivea
DSM 5205]
Length = 792
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 54/166 (32%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L VDD ++R LL + TAVDSG A+ L E+ + DLI
Sbjct: 670 HILLVDDDEMNRFFGRELLNRLNATTTAVDSGAEAIHQL---EQHTF--------DLIFM 718
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D MP M GYE +KI+ F
Sbjct: 719 DVSMPEMDGYETTRKIRTDPRFA------------------------------------- 741
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
++P++ +++ I +RCL+ G D++ KP L D++ +
Sbjct: 742 ------KLPIIALTAHAITGEKERCLDAGMNDYLTKPFALVDMQTL 781
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 52/185 (28%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R++I LL + KV AV G +A + L +DLI+
Sbjct: 56 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPR---------SIDLIL 106
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P ++GY LL T+I+ + IC
Sbjct: 107 TEVDLPAISGYALL--------------TLIMEHD----------IC------------- 129
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
+ IPV++MSS++ ++ + +C+ GA D++VKP+++++++ + ++ R
Sbjct: 130 ------KSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQTQSAA 183
Query: 210 GRGIN 214
GIN
Sbjct: 184 TAGIN 188
>gi|219117662|ref|XP_002179622.1| ethylene receptor 1 [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408675|gb|EEC48608.1| ethylene receptor 1 [Phaeodactylum tricornutum CCAP 1055/1]
Length = 833
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
+ P L VDDS ++ KV++++L+ + ++ SG+ ALQ++ + +
Sbjct: 688 IQPQQAASFRTLIVDDSTINLKVMKQMLSRLGVQQILVAHSGKEALQYIKESSKMHVP-- 745
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIK 107
+LI+TD MPGMTGYELLK+++
Sbjct: 746 -----NLILTDLQMPGMTGYELLKQLR 767
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 56/179 (31%)
Query: 18 DGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI 77
+G + SPS +V +L VDD V RKV+E LL VT V +G A + ++
Sbjct: 100 EGEEYSPS---KVRILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAWDNISSGQQ--- 153
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICF 137
K DL++TD MP +TG++LL++I
Sbjct: 154 ------KYDLVLTDVMMPHITGFDLLQRI------------------------------- 176
Query: 138 CFPFFFPSNNLEQDSSALREIPVVIMSSENI-LARIDRCLEDGAEDFIVKPVKLSDVKR 195
D + IPV++MS + + ++ G +DF+ KP+ +K+
Sbjct: 177 ------------NDHPIYKNIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKK 223
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V+ R+V+ LL +V AV G +A + + DL++T+
Sbjct: 20 VLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMR---------GRAYAFDLVLTE 70
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G +LL +I ++ C
Sbjct: 71 VDMPTLSGIDLLARI--------------------------VAAHEC------------- 91
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS++ + + RC+++GA DF+VKPV+ ++++ + ++ R
Sbjct: 92 ----KNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKNELRNLWQHVWR 138
>gi|428217824|ref|YP_007102289.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
gi|427989606|gb|AFY69861.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
Length = 334
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 55/163 (33%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCK-VTAVDSGRRALQFLGLDEEQSINGFDGLK 84
+ E+ ++L VDD+ ++R V+ R L + + A ++G+ AL+ L G
Sbjct: 3 NHEDFNLLIVDDNEMNRDVLRRHLVRQGYQQILAAENGKEALEMLS-----------GHN 51
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
DLI+ D MP M GYELL +K
Sbjct: 52 FDLILLDIQMPQMNGYELLAYLKADLK--------------------------------- 78
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
L IPV+++S+ + + + RC+E GAED++ KP
Sbjct: 79 ----------LSHIPVIMISAVDEIDSVVRCIEMGAEDYLHKP 111
>gi|406893933|gb|EKD38867.1| sensory box histidine kinase/response regulator [uncultured
bacterium]
Length = 879
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 38/160 (23%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+D+F+++ V ++L C+V A D+GR+AL + +EQS DLI
Sbjct: 737 IRILLVEDNFINQTVAMQILKNLGCRVVAADNGRQALDAI---KEQSF--------DLIF 785
Query: 90 TDYCMPGMTGYELLKKIKV-TTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
D MP M G E + I+ N ++ I +
Sbjct: 786 MDVQMPEMDGLEATRAIRQWEARRNANHAGRI--------------------------DD 819
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
D S R IP++ +++ ++ +CL+ G +D++ KPV
Sbjct: 820 PADHSRDRRIPIIALTAHAMVGDRQKCLDAGMDDYLAKPV 859
>gi|88706905|ref|ZP_01104604.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
gi|88698827|gb|EAQ95947.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
Length = 495
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 54/156 (34%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+LAVDD +R ++ R LT S V SG AL+ L VD+++ D
Sbjct: 143 ILAVDDREENRALLARYLTRSGHFVVTAPSGEEALEMLA-----------NADVDVVLLD 191
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM G E+L++IK
Sbjct: 192 RMMPGMDGREVLRRIKA------------------------------------------- 208
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
LR PV+++S E + I C++ GA+D++ KP
Sbjct: 209 EPRLRATPVIMISGEQDMQGIIECIKAGADDYLFKP 244
>gi|357009921|ref|ZP_09074920.1| two-component hybrid sensor and regulator [Paenibacillus elgii B69]
Length = 998
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 55/173 (31%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V++LAVDD V+ V+ +L+ ++T S R L+ L D + DL+I
Sbjct: 667 VNILAVDDDPVNLNVLVGILSSEPYRITTAHSAREVLELL-----------DTQQWDLLI 715
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MP M+GYEL +K++ E
Sbjct: 716 ADVMMPQMSGYELTQKVR-----------------------------------------E 734
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLT 201
Q S L E+PV+++++ + A I + GA D++ KPV +++ RI+ +T
Sbjct: 735 QYS--LSELPVLLLTARSQPADIYTGFKSGANDYVTKPVDALELQYRIRALIT 785
>gi|428210719|ref|YP_007083863.1| serine phosphatase RsbU, regulator of sigma subunit [Oscillatoria
acuminata PCC 6304]
gi|427999100|gb|AFY79943.1| serine phosphatase RsbU, regulator of sigma subunit [Oscillatoria
acuminata PCC 6304]
Length = 970
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 63/190 (33%)
Query: 21 DLSPSDTE---------EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL 71
DL+P E +L VDD ++ +V+ +L++ + V +G AL+ L
Sbjct: 577 DLNPEPLEPRVIASHKGSAKLLIVDDEPINLQVLVNMLSLQNYTVIQAKNGLDALELL-- 634
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLF 131
G K DL++ D MP MTGYE+ +KI+
Sbjct: 635 --------HKGFKPDLVLLDVMMPKMTGYEVTQKIR------------------------ 662
Query: 132 ILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 191
++ E+PV++++++N L+ + E GA D++ KPV+
Sbjct: 663 -------------------ETWQASEMPVLLLTAKNQLSDLVAGFESGANDYLTKPVEKD 703
Query: 192 D-VKRIKDYL 200
+ + RIK +L
Sbjct: 704 ELLARIKTHL 713
>gi|325179822|emb|CCA14225.1| protein kinase putative [Albugo laibachii Nc14]
Length = 935
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 57/174 (32%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCK--VTAVDSGRRALQFLGLDEEQSINGFDGL 83
D +V +L V+D R I + + SCK V+AV++G+ ALQ L +QS +
Sbjct: 2 DPSDVRILVVEDDAFTR--IATIDILQSCKYNVSAVENGKEALQTL----QQSYQQY--- 52
Query: 84 KVDLIITDYCMPGMTGYELLKKIKV-TTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
DL++ D +P MTG ELL+ I+ T FN
Sbjct: 53 --DLVLCDVMLPCMTGIELLEAIQAHPTRFN----------------------------- 81
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
IP+V+ S + + CL GA+D+++KP++++ K +
Sbjct: 82 --------------HIPIVMTSCNEGMDVVKNCLSKGAKDYLIKPIQVNTAKTL 121
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R V+ LL S +VTAV +G +A + L E N +D+++T+
Sbjct: 97 VLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKIL----EDLTN-----HIDIVLTE 147
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI F
Sbjct: 148 VVMPFISGIGLLCKIMSHKTF--------------------------------------- 168
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 169 ----KNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 215
>gi|297819166|ref|XP_002877466.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323304|gb|EFH53725.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 199
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 64/178 (35%)
Query: 30 VHVLAVDDSFVDRKVIERLL--------TISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
++V+ VDD V +++ R+L ++ V VD ++AL L + +
Sbjct: 16 INVMVVDDDHVFLQILARMLEKNKYIDPSVMEITVITVDDPKKALSTLEIQRDN------ 69
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
+DLIITDY MPGM G +L KKI
Sbjct: 70 ---IDLIITDYYMPGMNGVQLKKKI----------------------------------- 91
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+ +PV++MSS+ + + L GA FI KP+K SD+ +I +
Sbjct: 92 ----------TEKFGNLPVLVMSSDT--NKEEESLSGGAMGFITKPIKPSDLTKIYQF 137
>gi|149910672|ref|ZP_01899309.1| Chemotaxis protein CheY (2 CheY domains) [Moritella sp. PE36]
gi|149806299|gb|EDM66275.1| Chemotaxis protein CheY (2 CheY domains) [Moritella sp. PE36]
Length = 265
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRAL 66
A+L I E DL D + +L VDDS RK I R+L ++ VT ++G AL
Sbjct: 124 ATLSFIEPEEIELDLY--DVTTLKILVVDDSLTARKHICRVLFSMGIVGVTTAENGVEAL 181
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
++L N FD LI+TDY MP M G EL++KI+ ++L
Sbjct: 182 EYLAQ------NTFD-----LIVTDYNMPEMDGKELVEKIRTNPELSYL 219
>gi|194365606|ref|YP_002028216.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
gi|194348410|gb|ACF51533.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
Length = 907
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 52/159 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL DD +R V++RLL + KVT V+ G L L EQ+ D I
Sbjct: 644 LRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL----EQA-------SYDAAI 692
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G +LLK+++V
Sbjct: 693 VDLHMPGMSGLDLLKQLRV----------------------------------------- 711
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+S + +PV+++S++ I RC + GA F+ KPV
Sbjct: 712 MQASGMPYVPVMVLSADVTPDSILRCEQAGARAFLAKPV 750
>gi|242278764|ref|YP_002990893.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
gi|242121658|gb|ACS79354.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
Length = 822
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L V+DS +E +L KV+ V +G ALQ L + VDL+I+
Sbjct: 5 HILVVEDSLTQAVKLEYILFEKGFKVSLVSNGENALQLL-----------EDKDVDLVIS 53
Query: 91 DYCMPGMTGYELLKKIKVTTPFN 113
D MPGM GYEL +KI+ + +
Sbjct: 54 DVVMPGMDGYELCEKIRKNSRYK 76
>gi|359434788|ref|ZP_09225034.1| sensor protein [Pseudoalteromonas sp. BSi20652]
gi|357918534|dbj|GAA61283.1| sensor protein [Pseudoalteromonas sp. BSi20652]
Length = 679
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 50/165 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D H+L VDD+ ++ +V + +L + K+T G AL+ L L+EEQ+
Sbjct: 551 DLSAYHLLLVDDNMINIEVAKAILKRTKVKITCASDGIEALEALRLNEEQAF-------- 602
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTP-FNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
D+I+ D MP + GY+ +I+ + ++ Y
Sbjct: 603 DIILMDCQMPNLNGYDTTSEIRNSKAGVDYTY---------------------------- 634
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
IP++ M++ + +RCL G D+I KP+K
Sbjct: 635 -------------IPIIAMTASAMEGDRERCLTAGMNDYITKPIK 666
>gi|354581917|ref|ZP_09000820.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
gi|353200534|gb|EHB65994.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
lactis 154]
Length = 1038
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 62/200 (31%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEV-----HVLAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
ASL L DEI SP+ + H+L VDD V+ +V+E +L +T SG
Sbjct: 684 ASLEL--DEIIPSTSSPTTLSGMSGYRPHLLIVDDDPVNLRVLEAILPTGEYDLTMATSG 741
Query: 63 RRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
+ AL L D + DL+ITD MP M+GYEL ++I+
Sbjct: 742 KEALALL-----------DRKEWDLVITDIMMPQMSGYELTRRIR--------------- 775
Query: 123 LNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAED 182
+ L E+P++++++ + I GA D
Sbjct: 776 ----------------------------ERFTLTELPILLLTARSQPNDIQSGFMAGAND 807
Query: 183 FIVKPVKLSDVK-RIKDYLT 201
++ KPV+ +++ RI+ T
Sbjct: 808 YVTKPVEALEIRSRIQALTT 827
>gi|410622201|ref|ZP_11333039.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410158149|dbj|GAC28413.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 268
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRAL 66
ASL+LI+ D DL+ D ++V VL VDDS + R I R+L + KV ++G AL
Sbjct: 125 ASLQLIN--TDEIDLNYFDAQDVRVLLVDDSRLARNHIRRVLEGMGLSKVMEAENGAHAL 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
L +E DL+ITDY MP M G EL + I+
Sbjct: 183 TLLKDNE-----------FDLVITDYNMPEMDGRELSEFIR 212
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 53/181 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL + R VI LL +V A G +A L +E+S N +DL++
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDIL---KEKSFN------IDLVL 94
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P M+G+ LL I +E
Sbjct: 95 TEVELPLMSGFLLLSTI-----------------------------------------ME 113
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
D+S + IPV++MSS + ++ + +C+ GA DF+VKP++ ++++ + ++ R L N
Sbjct: 114 HDAS--KNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNELRNLWQHVWRK-QLANG 170
Query: 210 G 210
G
Sbjct: 171 G 171
>gi|332709747|ref|ZP_08429706.1| signal transduction histidine kinase [Moorea producens 3L]
gi|332351574|gb|EGJ31155.1| signal transduction histidine kinase [Moorea producens 3L]
Length = 1135
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 69/206 (33%)
Query: 4 TNGVASLRLISDE-IDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
++ + S LISD I +LS + +L VDD V+ +V+ L++ + K+T
Sbjct: 702 SDHLMSDHLISDHLISDQNLSSPSMKAFKILIVDDEPVNLQVLVNHLSLHNYKIT----- 756
Query: 63 RRALQFLGLDEEQSINGFD-------GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
Q++NG D G + DLI+ D MP MTGYE KKI+
Sbjct: 757 ------------QAVNGLDAFTKIRQGYRPDLILLDIMMPKMTGYEFCKKIRNK------ 798
Query: 116 YSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRC 175
+ P+ E+PVV+++++N ++ +
Sbjct: 799 --------------------------YLPN-----------ELPVVLLTAKNQISDLVAG 821
Query: 176 LEDGAEDFIVKPVKLSD-VKRIKDYL 200
GA D++ KP+ ++ + RIK +L
Sbjct: 822 FAAGANDYLTKPISKNELLARIKTHL 847
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R V+ LL S +VTAV +G +A + L E N +D+++T+
Sbjct: 97 VLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKIL----EDLTN-----HIDIVLTE 147
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI F
Sbjct: 148 VVMPFISGIGLLCKIMSHKTF--------------------------------------- 168
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 169 ----KNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 215
>gi|381157613|ref|ZP_09866847.1| PAS domain S-box, partial [Thiorhodovibrio sp. 970]
gi|380881476|gb|EIC23566.1| PAS domain S-box, partial [Thiorhodovibrio sp. 970]
Length = 1266
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 11/77 (14%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL +DD+ + K+I+ +L + + T VD+G AL FL ++Q+ VD+ I
Sbjct: 791 HVLVIDDNLNNGKIIQDMLDLVGVRCTTVDNGPAALTFL---QQQA--------VDIAIV 839
Query: 91 DYCMPGMTGYELLKKIK 107
DY MP M G E++++I+
Sbjct: 840 DYQMPVMDGLEVIRRIR 856
>gi|254445390|ref|ZP_05058866.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198259698|gb|EDY84006.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 517
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P+ +E HVL VDD V R ++ LL + VT ++ A Q L QS GF
Sbjct: 3 APTSSERPHVLLVDDDRVFRTLVGSLLNRCNYLVTTAETAAEAWQSL-----QS-KGFGN 56
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKV 108
D++++DY MPG TG +LLK I++
Sbjct: 57 F--DVVVSDYWMPGQTGLDLLKSIQL 80
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 53/181 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL + R VI LL +V A G +A L +E+S N +DL++
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDIL---KEKSFN------IDLVL 94
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P M+G+ LL I +E
Sbjct: 95 TEVELPLMSGFLLLSTI-----------------------------------------ME 113
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
D+S + IPV++MSS + ++ + +C+ GA DF+VKP++ ++++ + ++ R L N
Sbjct: 114 HDAS--KNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNELRNLWQHVWRK-QLANG 170
Query: 210 G 210
G
Sbjct: 171 G 171
>gi|406896406|gb|EKD40694.1| hypothetical protein ACD_74C00242G0001 [uncultured bacterium]
Length = 366
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 55/177 (31%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P + +H+L +D+ V++KV + LL + V ++GR AL+ G ++
Sbjct: 233 PGHSPTLHILLAEDNIVNQKVAQGLLEKAGHCVVVANNGREALEKYGAED---------- 282
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
DLI+ D MP M G+E KI+
Sbjct: 283 -FDLILMDVQMPEMDGFEATTKIRAH---------------------------------- 307
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
EQ S R IP++ +++ + ++CL G + ++ KP ++K++ D L
Sbjct: 308 -----EQGSE--RHIPIIALTAHAMKGYREKCLAAGMDGYVSKPF---NIKKLADLL 354
>gi|66044540|ref|YP_234381.1| PAS [Pseudomonas syringae pv. syringae B728a]
gi|63255247|gb|AAY36343.1| multi-sensor hybrid histidine kinase [Pseudomonas syringae pv.
syringae B728a]
Length = 1209
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P DT +H+L VDD +R V+ R L +VTAV+ G+ AL N +G
Sbjct: 960 APVDTRSLHLLVVDDMSANRLVLTRQLEFLGHQVTAVEDGKAALS----------NWCEG 1009
Query: 83 LKVDLIITDYCMPGMTGYELLKKIK 107
D +ITD MPG++GY L + I+
Sbjct: 1010 -AFDAVITDCNMPGISGYALTQAIR 1033
>gi|336316382|ref|ZP_08571282.1| chemotaxis signal transduction protein [Rheinheimera sp. A13L]
gi|335879504|gb|EGM77403.1| chemotaxis signal transduction protein [Rheinheimera sp. A13L]
Length = 307
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
+D +++ VL DDS V R ++R L+ V V+ GR AL +L + Q + G +
Sbjct: 174 ADFKDLTVLVADDSAVARNQVKRALSTIGINVETVNDGRLALNWLEA-KAQELGGDISSR 232
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
V LII+D MP M GY L ++K ++ II+ +L +F
Sbjct: 233 VPLIISDIEMPEMDGYTLTAEVKANEHLRHVH--IILHSSLSGVF 275
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R V+ LL + TAV +G +A + L Q + +DL++T+
Sbjct: 91 VLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLL-----QDLTNH----IDLVLTE 141
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL I +S C
Sbjct: 142 VAMPCLSGIGLLSNI--------------------------MSHKTC------------- 162
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
R IPV++MSS + + + RCL GA DF+VKP++ +++K + ++ R
Sbjct: 163 ----RNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNELKILWQHVWR 209
>gi|345866620|ref|ZP_08818645.1| sensory box protein [Bizionia argentinensis JUB59]
gi|344048964|gb|EGV44563.1| sensory box protein [Bizionia argentinensis JUB59]
Length = 884
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 18/95 (18%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD+ +RK++ R+L I +V DSG +AL + + E D+II D
Sbjct: 614 VLIVDDNENNRKILRRMLEIKDIEVEEADSGLKALMIMMKESE----------FDVIIMD 663
Query: 92 YCMPGMTGYELLKKIK--------VTTPFNFLYST 118
Y MP M G E ++KIK PF LYS+
Sbjct: 664 YHMPVMDGIETIRKIKGLQQPSDTREQPFIVLYSS 698
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 58/180 (32%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H++ DD RK+++ +L VTA + G LQ L EE +DLI+
Sbjct: 4 HIVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLLRQSEE---------SIDLILL 54
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D MPG +G+ELL+ I+ + P
Sbjct: 55 DIKMPGFSGFELLEMIRASYP--------------------------------------- 75
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK----LSDVKRIKDYLTRDVNL 206
+IP+V++++ N L + + GA D++ KPV + VKR+ D ++ L
Sbjct: 76 ------QIPIVMITAFNDLDTGMKAMRMGASDYLAKPVHREALFATVKRVLDEAEKEQQL 129
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 52/177 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ + R++I LL KV AV G A + L +E+S N +DLI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL---KEKSHN------IDLIL 87
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P ++G+ LL L
Sbjct: 88 TELDLPSISGFALLA-------------------------------------------LV 104
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNL 206
+ A + IPV++MSS++ + + +C+ GA D+++KP++ +++K + ++ R + L
Sbjct: 105 MEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTL 161
>gi|254415722|ref|ZP_05029480.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196177428|gb|EDX72434.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 974
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 54/177 (30%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
S T E +L VDD ++ +V+ L++ + + SG AL + EQ G K
Sbjct: 573 SKTGEFTILVVDDEPINLQVVTNHLSVHNYAIVQATSGIEALAKI----EQ------GFK 622
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
DL+I D MP M+GYE+ +KI+ CFP
Sbjct: 623 PDLVILDIMMPKMSGYEVCQKIRQ-----------------------------CFP---- 649
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
E+P+++++++ ++ + L GA D++ KP+ + + RIK +L
Sbjct: 650 ----------ATEMPIILLTAKEQVSDLVEGLSLGANDYLTKPISKHELIARIKTHL 696
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 52/177 (29%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ + R++I LL KV AV G A + L +E+S N +DLI+
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL---KEKSHN------IDLIL 87
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P ++G+ LL L
Sbjct: 88 TELDLPSISGFALLA-------------------------------------------LV 104
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNL 206
+ A + IPV++MSS++ + + +C+ GA D+++KP++ +++K + ++ R + L
Sbjct: 105 MEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTL 161
>gi|381171602|ref|ZP_09880745.1| sensory/regulatory protein RpfC [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687975|emb|CCG37232.1| sensory/regulatory protein RpfC [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 726
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 52/159 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KVT V+ + L + DE+ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVMA-DED----------FDAVI 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G ++LK+++V
Sbjct: 511 VDLHMPGMSGLDMLKQLRV----------------------------------------- 529
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+S +R PVV++S++ I C + GA F+ KPV
Sbjct: 530 MQASGIRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 568
>gi|357417568|ref|YP_004930588.1| RpfC protein [Pseudoxanthomonas spadix BD-a59]
gi|355335146|gb|AER56547.1| RpfC protein [Pseudoxanthomonas spadix BD-a59]
Length = 742
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 55/171 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+H+L DD +R V++RLL + +V+ V+ G L + + + D +I
Sbjct: 474 MHILVADDHQANRMVLQRLLQKAGHRVSCVNGGEDVLDAMAMSD-----------YDAVI 522
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G +LLK+++V P
Sbjct: 523 IDLHMPGMSGLDLLKELRVMQAGG-------------------------GPI-------- 549
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
PV+++S++ I RC + GA F+ KPV S ++ DYL
Sbjct: 550 --------TPVMVLSADVTPESISRCEQAGAYAFLAKPVAAS---KLLDYL 589
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+++ LL +V ++G +A L D + +I DL++
Sbjct: 21 IRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARL-QDMQDNI--------DLVL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
++ MPG++G LL+KI ++C
Sbjct: 72 SEVVMPGLSGISLLEKI------------------------MAHNVC------------- 94
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 95 ------KDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNELKNLWQHVWR 141
>gi|422671275|ref|ZP_16730641.1| PAS protein [Pseudomonas syringae pv. aceris str. M302273]
gi|330969015|gb|EGH69081.1| PAS protein [Pseudomonas syringae pv. aceris str. M302273]
Length = 1188
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P DT +H+L VDD +R V+ R L +VTAV+ G+ AL N +G
Sbjct: 939 APVDTRSLHLLVVDDMSANRLVLTRQLEFLGHQVTAVEDGKAALS----------NWCEG 988
Query: 83 LKVDLIITDYCMPGMTGYELLKKIK 107
D +ITD MPG++GY L + I+
Sbjct: 989 -AFDAVITDCNMPGISGYALTQAIR 1012
>gi|154252497|ref|YP_001413321.1| two component sigma-54 specific Fis family transcriptional
regulator [Parvibaculum lavamentivorans DS-1]
gi|154156447|gb|ABS63664.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Parvibaculum lavamentivorans DS-1]
Length = 511
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 53/157 (33%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD R+++E ++ + VD G AL +L G G ++ L+I D
Sbjct: 5 ILIVDDDPAQRRILEEVVNRDGYRAIPVDGGEAALAYL--------EGPGGAEISLVILD 56
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPG+ G E+LK++ P
Sbjct: 57 LVMPGIDGMEVLKRVHPNKP---------------------------------------- 76
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+PV+++++ + + + +GA DF+VKPV
Sbjct: 77 -----NLPVIVLTAHGGIETVVNVMREGASDFVVKPV 108
>gi|406836798|ref|ZP_11096392.1| PAS domain S-box [Schlesneria paludicola DSM 18645]
Length = 800
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 58/202 (28%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+++ VL VDD+ +R +++ +L + + TAVDS ALQ L +SI + DL
Sbjct: 533 KDLRVLIVDDNATNRLILQEILNSWAMRPTAVDSAPAALQELS----RSIQANE--PYDL 586
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
+++D MP + G+EL I+ F +ST+I+ L+ S
Sbjct: 587 VLSDVHMPDVDGFELASTIRQDRRF---HSTVIMMLS--------------------SGA 623
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLG 207
D++ RC E GA ++KP+K SD+ +LT LG
Sbjct: 624 SSGDAA--------------------RCRELGAAAHLMKPIKQSDL-----HLTIATTLG 658
Query: 208 NEGRGINKRKARESCDLSSSPP 229
N KR A++S + S+ P
Sbjct: 659 NAA----KRAAQQSTKIDSTCP 676
>gi|424066487|ref|ZP_17803951.1| multi-sensor hybrid histidine kinase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|408002220|gb|EKG42482.1| multi-sensor hybrid histidine kinase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 478
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P DT +H+L VDD +R V+ R L +VTAV+ GR AL + +G
Sbjct: 229 TPVDTRSLHLLVVDDMSANRLVLTRQLEFLGHQVTAVEDGRAALS----------SWCEG 278
Query: 83 LKVDLIITDYCMPGMTGYELLKKIK 107
D +ITD MPG++GY L + I+
Sbjct: 279 -AFDAVITDCNMPGISGYALTQAIR 302
>gi|119487004|ref|ZP_01620876.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
gi|119455933|gb|EAW37067.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
Length = 355
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 54/163 (33%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
+D E VL VDD+ V+R ++ R +T +V +G AL+ +
Sbjct: 3 ADLESSLVLIVDDNEVNRDLLARRITREGYQVMLASNGFEALEMM-----------RSQP 51
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
+DL++ D MP M GY++L+ +K
Sbjct: 52 LDLVLLDIMMPQMNGYQVLEAVKA------------------------------------ 75
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+LR IP++++S+ N + + RC+E GAED++ KP
Sbjct: 76 -------DQSLRYIPMIMISAVNDIESVVRCIELGAEDYLSKP 111
>gi|183219846|ref|YP_001837842.1| putative two-component sensor protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189909977|ref|YP_001961532.1| two component response regulator sensor histidine kinase/response
regulator subunits [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774653|gb|ABZ92954.1| Sensor and regulator protein of a two component response regulator
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778268|gb|ABZ96566.1| Putative two-component sensor protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 710
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 51/165 (30%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+LAVDD+ V+ ++I R L + +V D G +ALQ L L+ K DLIIT
Sbjct: 582 RILAVDDNSVNLEIILRQLKVFGLEVDGADDGEKALQ-LWLNN----------KYDLIIT 630
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D MP GY L K+I+ N+E+
Sbjct: 631 DCHMPIKDGYTLTKEIR---------------------------------------NIEK 651
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
S + IP++ ++ ++ + CL G ++ ++KP +LS+++
Sbjct: 652 -SKFEKRIPIIGYTANALVEEREYCLSIGMDELLIKPARLSNLRE 695
>gi|428319185|ref|YP_007117067.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
gi|428242865|gb|AFZ08651.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
Length = 352
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 54/160 (33%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+E VL VDD+ V+R ++ R L VT + G +AL+ L D DL
Sbjct: 4 DEGSVLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRRD-----------PFDL 52
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++ D MP M GY++L+ +K
Sbjct: 53 VLLDIMMPQMNGYQVLESLKA--------------------------------------- 73
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
LR IPV+++S+ + + I RC+E GAED++ KP
Sbjct: 74 ----DENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|402813381|ref|ZP_10862976.1| Two-component hybrid sensor and regulator [Paenibacillus alvei DSM
29]
gi|402509324|gb|EJW19844.1| Two-component hybrid sensor and regulator [Paenibacillus alvei DSM
29]
Length = 1018
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 61/227 (26%)
Query: 1 MTTTNGVASLRLISDEIDGFDLSPSDT-EEVHVLAVDDSFVDRKVIERLLTISSCKVTAV 59
+ +T V + +ISDE+ + T + +L VDD V+ K++ +L+ +V
Sbjct: 663 IVSTQAVRDMNMISDELHVVQQQTASTLYKPMILIVDDDRVNLKILGDILSADQYEVVRA 722
Query: 60 DSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
SG+ AL L D + DLII+D MP M+GYEL + I+
Sbjct: 723 ASGKEALSKL-----------DTAQWDLIISDVMMPHMSGYELTRLIR------------ 759
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
+ ++ E+P++I+++ + I G
Sbjct: 760 -------------------------------ERFSILELPILILTARSNAEDIHSGFMAG 788
Query: 180 AEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLSS 226
A D++ KPV +++ +R L R +N+R E+ L +
Sbjct: 789 ANDYVTKPVDAMELR------SRVHALTELKRAVNERLRMEAAYLQA 829
>gi|367044060|ref|XP_003652410.1| hypothetical protein THITE_2113885 [Thielavia terrestris NRRL 8126]
gi|346999672|gb|AEO66074.1| hypothetical protein THITE_2113885 [Thielavia terrestris NRRL 8126]
Length = 466
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 44/175 (25%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
L S+ +HVL VDD+ V+RK R++ +V AV +G+ AL ++ +E ++
Sbjct: 301 LPRSERANIHVLVVDDNPVNRKYAVRVIEKLGFQVAAVCNGKEALDYIAAAKEGTLR--- 357
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
K D+I+ D MP + GYE + ++ N Y T +
Sbjct: 358 --KPDIILMDVHMPIIDGYECTQYLR----HNLDYKTYV--------------------- 390
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
++PVV +++ ++C G +D++ +PV + ++R+
Sbjct: 391 --------------SQVPVVALTASATQDDREKCERAGMDDYLPRPVTVRSLERM 431
>gi|90426074|ref|YP_534444.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris
BisB18]
gi|90108088|gb|ABD90125.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris
BisB18]
Length = 783
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
++++ +L VDD + R LL V SG +ALQ LG D + D
Sbjct: 663 SQQLRILLVDDDPLVRMNTAYLLMDLGHSVMEAQSGAQALQLLGSDA----------RFD 712
Query: 87 LIITDYCMPGMTGYELLKKIKVTTP 111
+++TDY MPGMTG +L ++K+ P
Sbjct: 713 VLLTDYAMPGMTGLDLATRVKIVKP 737
>gi|89893206|ref|YP_516693.1| hypothetical protein DSY0460 [Desulfitobacterium hafniense Y51]
gi|219666479|ref|YP_002456914.1| signal transduction histidine kinase LytS [Desulfitobacterium
hafniense DCB-2]
gi|89332654|dbj|BAE82249.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536739|gb|ACL18478.1| signal transduction histidine kinase, LytS [Desulfitobacterium
hafniense DCB-2]
Length = 1018
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 53/166 (31%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E +L VDD F + K + +LT++ VT +G AL L DL
Sbjct: 689 EFSILVVDDEFSNLKALMNILTLNQYNVTVAINGEAALHLLK----------GAFHYDLC 738
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
I D MPG++GYE+ +KI+ T YS +
Sbjct: 739 ILDVMMPGISGYEVCRKIRET------YSPL----------------------------- 763
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
E+P+++++++ + ++ GA DFI KP ++ ++K
Sbjct: 764 --------ELPILLLTAKALPEDMEAGFRAGANDFIEKPFEVRELK 801
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 56/173 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL--KVDLII 89
VL V++ R+V+ LL S +VTAV +G +A L D L VDL++
Sbjct: 74 VLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSIL-----------DDLTNHVDLVL 122
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P ++G LL KI
Sbjct: 123 AEVALPSLSGIGLLCKI------------------------------------------- 139
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ A + IPV++MSS + + + +CL GA DF VKP++ +++K + ++ R
Sbjct: 140 MNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHVWR 192
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 54/171 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
++ +DDS R V+ LL S +V +G +A + L E N +DL++T+
Sbjct: 83 LVEIDDST--RHVVTALLRNCSYEVIEAANGLQAWKIL----EDLTN-----HIDLVLTE 131
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPG++G LL KI + T
Sbjct: 132 VAMPGLSGIGLLYKI-------MGHKT--------------------------------- 151
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPVV+MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 152 ---RKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 199
>gi|297813131|ref|XP_002874449.1| cytokinin-independent 1 [Arabidopsis lyrata subsp. lyrata]
gi|297320286|gb|EFH50708.1| cytokinin-independent 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1113
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 24 PSDTE---EVHVLAVDDSFVDRKV-IERLLTISSCKVTAVDSGRRALQFL--GLDEEQSI 77
PSD E E VL VDD+F+ RKV I +L + +V D+G+ AL+ + GL + +
Sbjct: 964 PSDDEFLREKRVLVVDDNFLTRKVAIGKLKKMGVSEVKQCDNGKEALRLVTEGLTQRREE 1023
Query: 78 NG-FDGLKVDLIITDYCMPGMTGYELLKKIK 107
G D L D I D MP M GYE ++I+
Sbjct: 1024 QGSVDNLPFDYIFMDCQMPDMDGYEATREIR 1054
>gi|254785366|ref|YP_003072795.1| CheV [Teredinibacter turnerae T7901]
gi|237683486|gb|ACR10750.1| putative CheV [Teredinibacter turnerae T7901]
Length = 316
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL-KVDLII 89
HVL VDDS + RK I++++ CK T G ALQFL EE G D ++ L+I
Sbjct: 180 HVLIVDDSTIARKQIQKVMQSLGCKTTLRKDGSEALQFL---EEMLSEGKDPYHELLLVI 236
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
+D MP M GY +++ + L+ +I+ +L +F
Sbjct: 237 SDIEMPEMDGYTFTAELRANSRLKNLH--VILHTSLSGVF 274
>gi|428316606|ref|YP_007114488.1| adenylate/guanylate cyclase with integral membrane sensor
[Oscillatoria nigro-viridis PCC 7112]
gi|428240286|gb|AFZ06072.1| adenylate/guanylate cyclase with integral membrane sensor
[Oscillatoria nigro-viridis PCC 7112]
Length = 1131
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+TE++ VL VDD ++ +VI L+I + ++T +G A+ +G G K
Sbjct: 716 ETEKIKVLVVDDEPINIQVIINSLSIENYEITQASNGLEAVNLIG----------SGFKP 765
Query: 86 DLIITDYCMPGMTGYELLKKIK 107
DLI+ D MP MTGYE+ ++++
Sbjct: 766 DLILLDVMMPQMTGYEVCREVR 787
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 56/173 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL--KVDLII 89
VL V++ R+V+ LL S +VTAV +G +A L D L VDL++
Sbjct: 96 VLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSIL-----------DDLTNHVDLVL 144
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P ++G LL KI
Sbjct: 145 AEVALPSLSGIGLLCKI------------------------------------------- 161
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ A + IPV++MSS + + + +CL GA DF VKP++ +++K + ++ R
Sbjct: 162 MNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHVWR 214
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 52/175 (29%)
Query: 36 DDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMP 95
+D R V+ LL + +VT+V +G A GL EE + N DL++TD MP
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAW---GLLEEANSN------FDLVLTDVVMP 239
Query: 96 GMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSAL 155
++G +L K+ L+++ A
Sbjct: 240 CLSGVGILSKM-----------------------------------------LKRE--AC 256
Query: 156 REIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEG 210
+ +P+VIMSS + L + RCL GA D++VKPV+ +++K + ++ R + G+ G
Sbjct: 257 KRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRKCHSGSVG 311
>gi|403175312|ref|XP_003334153.2| hypothetical protein PGTG_15390 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171549|gb|EFP89734.2| hypothetical protein PGTG_15390 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 2271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 42/182 (23%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+++ HVL V+D+ ++ KVI+R LT+ V+ GR AL L D ++ + +D
Sbjct: 2131 SQQTHVLVVEDNTINVKVIKRQLTLKGYMVSVAMDGREALNRLYADASET---SELPPID 2187
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+++ D MP M G E + ++
Sbjct: 2188 IVLMDIQMPVMNGLEAITHLRAA------------------------------------- 2210
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNL 206
E+ + PV+ ++ + ++CL G + VKP K+ DV+ + L ++ L
Sbjct: 2211 --EKTGEIKKRYPVIAVTGNARKEQTEQCLASGFDSICVKPYKIDDVQSRMEALLANLEL 2268
Query: 207 GN 208
+
Sbjct: 2269 ND 2270
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL DD+ R ++ +L+ V AVD G++A Q L+ + D++++D
Sbjct: 1468 VLIADDNSDMRAFLKSVLSRYYNVVEAVD-GQQAYQLAKLN-----------RPDILVSD 1515
Query: 92 YCMPGMTGYELLKKIKV 108
MPGM G+ELL+++K
Sbjct: 1516 VMMPGMDGFELLRRLKA 1532
>gi|372209578|ref|ZP_09497380.1| integral membrane sensor hybrid histidine kinase [Flavobacteriaceae
bacterium S85]
Length = 245
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L V+DS+ I+ +L S V V+ G +AL+ + D +DL+IT
Sbjct: 13 QILVVEDSYESVLYIKSILDSKSYNVLEVNCGEKALEII-----------DTQPIDLVIT 61
Query: 91 DYCMPGMTGYELLKKIKVTTPFNF 114
DY MP M GYEL+K+I+ +NF
Sbjct: 62 DYLMPKMNGYELIKEIR-KRNYNF 84
>gi|226315436|ref|YP_002775332.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226098386|dbj|BAH46828.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1050
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V+ +V+E +L +VT V SG+ AL LG E DL+I+D
Sbjct: 711 LLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAILGTGE-----------WDLVISD 759
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M+GYEL + I+ +
Sbjct: 760 IMMPQMSGYELTRMIR-------------------------------------------E 776
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
L E+PV+++++ + I GA D++ KP++ ++K + LT
Sbjct: 777 RFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPIEGMEIKSRIEALT 826
>gi|77406220|ref|ZP_00783289.1| DNA-binding response regulator [Streptococcus agalactiae H36B]
gi|77175170|gb|EAO77970.1| DNA-binding response regulator [Streptococcus agalactiae H36B]
Length = 223
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 57/174 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+D+ V +K+I LT + +G+ AL N D +V LII
Sbjct: 2 IKILVVEDNIVQQKIITTKLTQEGYQFITASNGQEAL-----------NCLDTEEVQLII 50
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M GY+L+++++
Sbjct: 51 TDIMMPMMDGYQLIQELR------------------------------------------ 68
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLTR 202
SA +P+++M++++ + + + G +D++VKPV+L ++ RIK L R
Sbjct: 69 ---SAAYNVPIIVMTAKSQMEDMTKGFGLGXDDYMVKPVQLQELALRIKALLRR 119
>gi|71906195|ref|YP_283782.1| response regulator receiver [Dechloromonas aromatica RCB]
gi|71845816|gb|AAZ45312.1| Response regulator receiver [Dechloromonas aromatica RCB]
Length = 266
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 56/184 (30%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSING 79
D+ ++ E + VL VDDS R+ + RLL + ++T +G+ A+ L EQS+
Sbjct: 137 DIDVTEIENLRVLLVDDSLASRRHLRRLLEELGIERITEAVNGKEAVSLL----EQSM-- 190
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
VDL+ITDY MP M G EL + I+
Sbjct: 191 -----VDLVITDYNMPEMDGRELTEYIRT------------------------------- 214
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR-IKD 198
S E+PV++++SE + R+ G KP + +++R I D
Sbjct: 215 ------------QSWQAEVPVLMVTSEQNMGRLAAVERAGVSAICDKPFEAGNIRRLISD 262
Query: 199 YLTR 202
LTR
Sbjct: 263 SLTR 266
>gi|423073142|ref|ZP_17061885.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
gi|361855972|gb|EHL07906.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Desulfitobacterium hafniense DP7]
Length = 702
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 64/187 (34%)
Query: 19 GFDLSPSDTEE-----VHV------LAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQ 67
G+D S S E VHV L VDD F + K + +LT++ VT +G AL
Sbjct: 352 GYDASESLATEALPQTVHVGGEFSILVVDDEFSNLKALMNILTLNQYNVTVAINGEAALH 411
Query: 68 FLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQN 127
L DL I D MPG++GYE+ +KI+ T YS +
Sbjct: 412 LLK----------GAFHYDLCILDVMMPGISGYEVCRKIRET------YSPL-------- 447
Query: 128 LFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
E+P+++++++ + ++ GA DFI KP
Sbjct: 448 -----------------------------ELPILLLTAKALPEDMEAGFRAGANDFIEKP 478
Query: 188 VKLSDVK 194
++ ++K
Sbjct: 479 FEVRELK 485
>gi|334117422|ref|ZP_08491513.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460531|gb|EGK89139.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
Length = 352
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 54/160 (33%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+E VL VDD+ V+R ++ R L VT + G +AL+ L D DL
Sbjct: 4 DEGSVLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRSD-----------PFDL 52
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++ D MP M GY++L+ +K
Sbjct: 53 VLLDIMMPQMNGYQVLESLKA--------------------------------------- 73
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
LR IPV+++S+ + + I RC+E GAED++ KP
Sbjct: 74 ----DENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|329896811|ref|ZP_08271727.1| Adenylate cyclase [gamma proteobacterium IMCC3088]
gi|328921566|gb|EGG28946.1| Adenylate cyclase [gamma proteobacterium IMCC3088]
Length = 452
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 69/189 (36%), Gaps = 61/189 (32%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P +T +L VDD +R V+ RLL+ V DSG AL+ L
Sbjct: 93 PRNTNVGSILVVDDQNDNRAVLNRLLSRVGHTVYTADSGEAALEQLSTQ----------- 141
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
+D+++ D MPGM G L KIK
Sbjct: 142 AIDVVLLDLSMPGMGGKTALTKIKA----------------------------------- 166
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP-------VKLSDVKRI 196
LR IPV+++S L + C+ GA+D++ KP +++
Sbjct: 167 --------DPKLRSIPVIVISGHQELDSVVECITAGADDYLFKPFNSVLLHARIAAGLER 218
Query: 197 KDYLTRDVN 205
K + R+VN
Sbjct: 219 KQWHDREVN 227
>gi|333993277|ref|YP_004525890.1| sensory transduction histidine kinase [Treponema azotonutricium
ZAS-9]
gi|333734347|gb|AEF80296.1| sensory transduction histidine kinase [Treponema azotonutricium
ZAS-9]
Length = 727
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 38/193 (19%)
Query: 12 LISDEIDGFDLSPSDT-EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG 70
+I+ E DLS D E+ H+L +D ++R+++ LL + K+ ++G +AL+
Sbjct: 571 IIAAERADQDLSAEDHFEDYHMLLAEDVEINREIVITLLEPTGLKIDCAENGSKALEMFR 630
Query: 71 LDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFL 130
D + K LI D MP M GYE KI+ F
Sbjct: 631 SDPD---------KYQLIFMDVQMPEMDGYEATSKIRAFEAERFE--------------- 666
Query: 131 FILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKL 190
F S ++ L +P++ M++ ++RCL G D + KP+ +
Sbjct: 667 ---------GLEFASQTPQK---KLTPVPIIAMTANVFREDVERCLASGMNDHVGKPLDI 714
Query: 191 SDV-KRIKDYLTR 202
++V +++ YL +
Sbjct: 715 NEVLDKLRSYLRK 727
>gi|94264870|ref|ZP_01288645.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93454691|gb|EAT04956.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 1211
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
L P D + VL VDD+ R+V+ + L S +V DSGRRAL L E D
Sbjct: 653 LPPVDLRGLRVLVVDDNATARQVLRQTLASFSFRVEEADSGRRALSLLARAAE------D 706
Query: 82 GLKVDLIITDYCMPGMTGYE 101
G +L+I D+ MP G E
Sbjct: 707 GRPYELVILDWVMPEFDGLE 726
>gi|124004919|ref|ZP_01689762.1| signal transduction histidine kinase [Microscilla marina ATCC 23134]
gi|123989597|gb|EAY29143.1| signal transduction histidine kinase [Microscilla marina ATCC 23134]
Length = 1367
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 17 IDGFDLSPSD---TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE 73
+D +D S D +L VDD+ V+RKV +L + C ++ +SG +A LD+
Sbjct: 1090 MDDWDFSSKDHFGDYRPRILIVDDNIVNRKVASEILNNAGCIISLAESGYQA-----LDK 1144
Query: 74 EQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFIL 133
Q+ + DLI D MPGM G E + IK L ++ L
Sbjct: 1145 VQAHS------YDLIFMDIQMPGMDGVETTRAIK--------------GLGIEQL----- 1179
Query: 134 SICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD- 192
P P+V M++ ++ +R +E+G +D++ KPVK
Sbjct: 1180 ------P------------------PIVAMTAYSMKEDRERFMEEGLDDYVSKPVKAQTL 1215
Query: 193 VKRIKDYLTRDVNL 206
++++++Y+ N+
Sbjct: 1216 IQKVQEYILGKSNV 1229
>gi|114564683|ref|YP_752197.1| response regulator receiver protein [Shewanella frigidimarina NCIMB
400]
gi|114335976|gb|ABI73358.1| response regulator receiver protein [Shewanella frigidimarina NCIMB
400]
Length = 265
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 18 DGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL--GLDEEQ 75
D DLS D + VL VDDS + R VI+R + G +Q + +D EQ
Sbjct: 133 DELDLSHFDVHNIRVLVVDDSRMARNVIKRTI------------GNLGMQLITEAVDGEQ 180
Query: 76 SINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+IN DL+ITDY MP + G L + I+
Sbjct: 181 AINLMKENMYDLVITDYNMPSVDGLALTQYIR 212
>gi|189423458|ref|YP_001950635.1| multi-sensor hybrid histidine kinase [Geobacter lovleyi SZ]
gi|189419717|gb|ACD94115.1| multi-sensor hybrid histidine kinase [Geobacter lovleyi SZ]
Length = 1068
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 51/161 (31%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L +D ++R V+ RLL +V AV++GRR L EE + G+ DL+I
Sbjct: 810 VRILLAEDQAINRLVLSRLLNDLGHQVVAVENGRRLL------EELAQGGY-----DLVI 858
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP + G++ ++ I+ S L
Sbjct: 859 TDVSMPELDGFQAVRAIR-------------------------------------SRQLP 881
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKL 190
SA IPV+ M++ + +RCLE G + ++ KPV +
Sbjct: 882 GIDSA---IPVLAMTAHALGEDRERCLESGMDGYLSKPVDI 919
>gi|379011725|ref|YP_005269537.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
gi|375302514|gb|AFA48648.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
Length = 124
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 54/175 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L +DDS V RK+I + + + +S + AL L E K++LI D
Sbjct: 3 MLTIDDSAVVRKIISAAVVVLGHECLEAESAQDALDLLKGPE----------KIELIFLD 52
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+ MPGM G E LK IK + F
Sbjct: 53 WNMPGMNGLEFLKTIKKSDQF--------------------------------------- 73
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYLTRDVN 205
+ IPVV++++EN+ + ++ G +I KP + + +K+I D L +VN
Sbjct: 74 ----KHIPVVMVTTENMPESVIEAVKAGVTQYITKPFSIEELMKKIIDSLGGEVN 124
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 52/185 (28%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R++I LL + KV AV G +A + L + FD LI+
Sbjct: 20 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL----KGRPRNFD-----LIL 70
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P ++GY LL I +E
Sbjct: 71 TEVDLPSVSGYALLSLI-----------------------------------------ME 89
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
D+ + IPV++MSS++ ++ + +C+ GA D++VKP+++++++ + ++ R +
Sbjct: 90 HDT--CKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSQSTA 147
Query: 210 GRGIN 214
GIN
Sbjct: 148 TAGIN 152
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+ R V+ LL +VTAV +G A GL E+ + N DL++
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAW---GLLEDANSN------FDLVL 233
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP ++G LL K+
Sbjct: 234 TDVVMPRLSGVGLLSKM------------------------------------------- 250
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
A R +P+VIMSS + L + RCL GA D++VKPV+ ++++ + ++ R
Sbjct: 251 MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVWR 303
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 56/169 (33%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
+ SPS +V +L DD V RK++ LL VT V +G A +++ ++
Sbjct: 154 EYSPS---KVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQ------ 204
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
K DL++TD MP +TG++LL++I
Sbjct: 205 ---KYDLVLTDVMMPHITGFDLLQRI---------------------------------- 227
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENI-LARIDRCLEDGAEDFIVKPV 188
D R IPV++MS + + ++ G +DF+ KP+
Sbjct: 228 ---------NDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI 267
>gi|15226594|ref|NP_182265.1| histidine kinase CKI1 [Arabidopsis thaliana]
gi|75097398|sp|O22267.1|CKI1_ARATH RecName: Full=Histidine kinase CKI1; AltName: Full=Protein
CYTOKININ-INDEPENDENT 1
gi|1679803|dbj|BAA13416.1| histidine kinase homolog [Arabidopsis thaliana]
gi|2529684|gb|AAC62867.1| putative histidine kinase [Arabidopsis thaliana]
gi|330255746|gb|AEC10840.1| histidine kinase CKI1 [Arabidopsis thaliana]
Length = 1122
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 24 PSDTEEVH---VLAVDDSFVDRKVIE-RLLTISSCKVTAVDSGRRALQFL--GLDEEQSI 77
PSD E + VL VDD+F+ RKV +L + +V DSG+ AL+ + GL + +
Sbjct: 977 PSDDEFLRGKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQ 1036
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
D L D I D MP M GYE ++I+
Sbjct: 1037 GSVDKLPFDYIFMDCQMPEMDGYEATREIR 1066
>gi|440744251|ref|ZP_20923555.1| PAS protein [Pseudomonas syringae BRIP39023]
gi|440374265|gb|ELQ11001.1| PAS protein [Pseudomonas syringae BRIP39023]
Length = 1187
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P DT +H+L VDD +R V+ R L +VTAV+ GR AL + +G
Sbjct: 938 APVDTRSLHLLVVDDMSANRLVLTRQLEFLGHQVTAVEDGRAALS----------SWCEG 987
Query: 83 LKVDLIITDYCMPGMTGYELLKKIK 107
D +ITD MPG++GY L + I+
Sbjct: 988 -AFDAVITDCNMPGISGYALTQAIR 1011
>gi|226875193|gb|ACO88944.1| cytokinin A-type response regulator 4 [Vitis vinifera]
Length = 42
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
++SS+L+ +P SSENI +RI+RCLE+GAEDF +KPV
Sbjct: 3 KESSSLKTLPSCDQSSENIPSRINRCLEEGAEDFFLKPV 41
>gi|120554103|ref|YP_958454.1| CheW protein [Marinobacter aquaeolei VT8]
gi|387814514|ref|YP_005430000.1| chemotaxis protein CheV [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|120323952|gb|ABM18267.1| putative CheW protein [Marinobacter aquaeolei VT8]
gi|381339530|emb|CCG95577.1| putative chemotaxis protein (cheV) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 309
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDDS V R+ IER LT +V + G++AL +L + D L LII+D
Sbjct: 183 VLVVDDSSVARRQIERCLTAIGMEVVTKNDGKQALHYLKEITQDGSRANDHLS--LIISD 240
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
MP M GY L+ +IK +Y +++ +L +F
Sbjct: 241 VEMPEMDGYTLVTRIKEDPALKDMY--VMLHTSLSGVF 276
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+ R V+ LL +VTAV +G A GL E+ + N DL++
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAW---GLLEDANSN------FDLVL 233
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP ++G LL K+
Sbjct: 234 TDVVMPRLSGVGLLSKM------------------------------------------- 250
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
A R +P+VIMSS + L + RCL GA D++VKPV+ ++++ + ++ R
Sbjct: 251 MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVWR 303
>gi|406864097|gb|EKD17143.1| hsp90-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1183
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL V+D+ V++KV+ R L C V+ + G+ AL FL N F G+++ +++
Sbjct: 1036 HVLVVEDNIVNQKVLSRQLQSVGCLVSVANHGKEALSFLEKSRFWKGNEFRGIELSVVLM 1095
Query: 91 DYCMPGMTGYELLKKIK 107
D MP M G +K I+
Sbjct: 1096 DLEMPVMDGLTCVKHIR 1112
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 52/185 (28%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R++I LL + KV AV G +A + L + FD LI+
Sbjct: 45 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL----KGRPRNFD-----LIL 95
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P ++GY LL I +E
Sbjct: 96 TEVDLPSVSGYALLSLI-----------------------------------------ME 114
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
D+ + IPV++MSS++ ++ + +C+ GA D++VKP+++++++ + ++ R +
Sbjct: 115 HDT--CKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSQSTA 172
Query: 210 GRGIN 214
GIN
Sbjct: 173 TAGIN 177
>gi|452750207|ref|ZP_21949959.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri NF13]
gi|452005857|gb|EMD98137.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri NF13]
Length = 801
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
S D + +L VDD R+V +L VT DSG ALQ L D
Sbjct: 674 SREDNAQHSILLVDDDPSVREVTALMLQDLGFAVTEADSGDHALQLLAGD---------- 723
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTP 111
++VDL++ D+ MPGM G EL + +++ P
Sbjct: 724 IEVDLLLADFAMPGMNGGELARAVRMRHP 752
>gi|345877022|ref|ZP_08828780.1| hypothetical protein Rifp1Sym_al00170 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225953|gb|EGV52298.1| hypothetical protein Rifp1Sym_al00170 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 1142
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L VDD ++ LL C+VTAVD+ ++AL+ +D +S DL+I+
Sbjct: 1022 HLLVVDDEHSLIDYLQDLLQSQGCRVTAVDNAQKALECF-MDAPESF--------DLVIS 1072
Query: 91 DYCMPGMTGYELLKKIKVTTP 111
D MP MTG EL +++ P
Sbjct: 1073 DQIMPNMTGSELARRLLAIRP 1093
>gi|294666715|ref|ZP_06731951.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603540|gb|EFF46955.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 726
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KVT V+ + L + DE+ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVMA-DED----------FDAVI 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 511 VDLHMPGMSGLDMLKQLRVMQASGIRYTPVVVL 543
>gi|113476924|ref|YP_722985.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110167972|gb|ABG52512.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1207
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 54/179 (30%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
S E +L VDD V+ ++ L++ + +V ++G++AL L D
Sbjct: 732 SSKKESEFQILIVDDEPVNLTLLSNQLSLHNYQVIQANNGQKALDILAQD---------- 781
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
DLI+ D MPGMTGYE+ +K++
Sbjct: 782 FLPDLILLDVMMPGMTGYEVTQKVR----------------------------------- 806
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYL 200
++ L ++P+++++++N ++ + LE GA D++ KP K + RIK ++
Sbjct: 807 --------ETWLLHQLPIIMLTAKNRVSDLVMGLEVGANDYLSKPFHKKELLARIKTHI 857
>gi|294624915|ref|ZP_06703570.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600794|gb|EFF44876.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 726
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KVT V+ + L + DE+ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVMA-DED----------FDAVI 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 511 VDLHMPGMSGLDMLKQLRVMQASGIRYTPVVVL 543
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V+ R+V+ LL +V AV G +A + + DL++T+
Sbjct: 57 VLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMR---------GRAYAFDLVLTE 107
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G +LL +I
Sbjct: 108 VAMPSLSGIQLLSRIVA------------------------------------------- 124
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ + IPV++MSS++ + + +C++ GA DF+VKPV+ ++++ + ++ R
Sbjct: 125 ADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELRNLWQHVWR 175
>gi|442611604|ref|ZP_21026310.1| Chemotaxis regulator-transmits chemoreceptor signals to flagelllar
motor components CheY [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441747532|emb|CCQ12372.1| Chemotaxis regulator-transmits chemoreceptor signals to flagelllar
motor components CheY [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 265
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 12/91 (13%)
Query: 20 FDLSPSDTEEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSIN 78
+L D +++ +L VDDS + R I R+LT + + +T + G +AL L DE+
Sbjct: 135 LELDLYDVQDIRILLVDDSRLARNHIRRVLTNLGAQHITEAEDGAQALAIL--DEQM--- 189
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVT 109
DLI+TDY MP + G EL +KI+ +
Sbjct: 190 ------FDLIVTDYNMPQVNGQELTEKIRAS 214
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 54/179 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
++ DDS R++I LL S KV AV G +A + L +DL++T+
Sbjct: 43 LVEADDST--RQIIAALLRKCSYKVAAVSDGLKAWETLKGRPH---------NIDLVLTE 91
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+P ++G+ LL T+I +E D
Sbjct: 92 VELPSISGFALL--------------TLI---------------------------MEHD 110
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEG 210
+ IPV++MSS + + + +C+ GA DF++KPV+ ++++ + ++ R L G
Sbjct: 111 --VCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLWQHVWRRQTLTGGG 167
>gi|39726322|gb|AAR30106.1| putative histidine kinase M3YPp [Botryotinia fuckeliana]
Length = 992
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 50/203 (24%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI----- 77
SP+ + H+L V+D+ V++KV+ + L + C V+ + G AL+FL E+S
Sbjct: 823 SPASSAPKHILIVEDNIVNQKVLSKQLRSAGCIVSVANHGLEALEFL----EKSTFSTSL 878
Query: 78 -NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSIC 136
G G+ ++++ D MP M G +++I+
Sbjct: 879 PEGVSGIPCNILLMDLEMPIMDGLTCVRQIR----------------------------- 909
Query: 137 FCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKR 195
E++ +PV+ +++ +I R E G + + KP ++ + V
Sbjct: 910 ----------KWEREGRVKGRVPVIAVTANARSEQIARAKEAGMDSVVTKPFRIGELVPE 959
Query: 196 IKDYLTRDVNLGNEGRGINKRKA 218
++ +L R V L G +A
Sbjct: 960 MERWLIRGVVLDRAKEGARDERA 982
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 52/178 (29%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V+ R+V+ LL +V AV G +A + + DL++T+
Sbjct: 40 VLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMR---------GRAYAFDLVLTE 90
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G +LL +I ++ C
Sbjct: 91 VNMPTLSGIDLLSRI--------------------------VAADEC------------- 111
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNE 209
+ IPV++MSS++ + + +C+++GA DF+VKPV+ ++++ + ++ R ++ ++
Sbjct: 112 ----KNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKNELRNLWQHVWRRHSMNSQ 165
>gi|427738854|ref|YP_007058398.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
gi|427373895|gb|AFY57851.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
Length = 1146
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 54/182 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L VDD V+ +V+ L++ +VT +GR AL +D+E+ K+DLI+
Sbjct: 736 HILIVDDEPVNLQVLNNHLSLHKYRVTQALNGREALNI--VDKEE--------KIDLILL 785
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D MP M+GYE +C +P++ L
Sbjct: 786 DIMMPKMSGYE---------------------------------VCAALREKYPAHQL-- 810
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYLTRDVNLGNE 209
PV++++++N + I + GA D++ KP + + RIK +L +
Sbjct: 811 --------PVIMLTAKNQVTDIVTGFKFGANDYLTKPFHKDELLTRIKSHLKLSQTSKSY 862
Query: 210 GR 211
GR
Sbjct: 863 GR 864
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 13/95 (13%)
Query: 12 LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL 71
+ISD++ + SPS +VH+L VDD V R ++ +L + VT V +G A L
Sbjct: 154 VISDQLPA-EYSPS---KVHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNGEEAWDTL-- 207
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKI 106
+NG + DL++TD MP +TG++LL++I
Sbjct: 208 -----LNG--KVMYDLVLTDVMMPMVTGFDLLQRI 235
>gi|452966564|gb|EME71574.1| chemotaxis response regulator protein-glutamate methylesterase
[Magnetospirillum sp. SO-1]
Length = 619
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 58/197 (29%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
P E V VL VDD+ ++R ++E LL + +V V+SG + L + +
Sbjct: 238 PPGLESVRVLVVDDNLMNRVLMETLLLRMGVGRVETVESGEKGLAAIARE---------- 287
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
K DLI+ D MPGM G+E+ ++++ P
Sbjct: 288 -KPDLILLDVMMPGMDGFEMCRQLRRRHP------------------------------- 315
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L E+PV+ +++ + A C + G D + KP+ D + +
Sbjct: 316 ------------LTELPVIFVTALDGPADRTACFQAGGSDMVTKPI---DAHEVAARVGV 360
Query: 203 DVNLGNEGRGINKRKAR 219
+ LG G+ + R
Sbjct: 361 HLRLGQAMDGLKAYRER 377
>gi|428316607|ref|YP_007114489.1| adenylate/guanylate cyclase with integral membrane sensor
[Oscillatoria nigro-viridis PCC 7112]
gi|428240287|gb|AFZ06073.1| adenylate/guanylate cyclase with integral membrane sensor
[Oscillatoria nigro-viridis PCC 7112]
Length = 1091
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 54/177 (30%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
+ V +L VDD V+ +V+ L + + SGR AL + G K
Sbjct: 675 QENSRVKILIVDDEAVNIQVLANNLLLEKYALAKASSGREALALID----------RGYK 724
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
DLI+ D MP MTGYE+ +KI+
Sbjct: 725 PDLILLDLMMPRMTGYEVCEKIR------------------------------------- 747
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP-VKLSDVKRIKDYL 200
+ +A+ E+P+V+++++N ++ + + GA DF+ KP VK + RIK ++
Sbjct: 748 -----EKFTAI-EVPIVMLTAKNQVSDLVQGFNAGANDFLTKPFVKNELLARIKTHI 798
>gi|376297750|ref|YP_005168980.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans ND132]
gi|323460312|gb|EGB16177.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans ND132]
Length = 317
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL----KVDL 87
VL DDS + RK+I +LT + KV A ++G ALQ+L + +S +G+ V+L
Sbjct: 185 VLLADDSTMARKMIANILTTAGFKVHAEENGELALQYLLKAKARS--RAEGMPLAHYVNL 242
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFL 115
++TD MP M G+ L ++IK T L
Sbjct: 243 VVTDIEMPSMDGHSLTRRIKEDTDLRHL 270
>gi|334136361|ref|ZP_08509829.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333606089|gb|EGL17435.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1054
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 54/180 (30%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
LS + H+L VDD ++ +V+E +L +VT V SG+ AL L D
Sbjct: 709 LSEVHRDRPHLLIVDDDPINLQVLETILPPEEYEVTLVTSGKEALAVL-----------D 757
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
+ DL+I+D MP M+GYEL + I+
Sbjct: 758 TKEWDLVISDIMMPQMSGYELTRIIR---------------------------------- 783
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
L E+P++++++ + I GA D++ KPV+ ++K + LT
Sbjct: 784 ---------KRFTLTELPILLLTARSQPKDIQSGFLAGANDYVTKPVEAIEIKSRIEALT 834
>gi|15240724|ref|NP_196338.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
gi|7546699|emb|CAB87277.1| putative protein [Arabidopsis thaliana]
gi|332003739|gb|AED91122.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
Length = 621
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 64/179 (35%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCK--------VTAVDSGRRALQFLGLDEEQSINGF 80
+++V+ VDD V ++ R+L S + V AVD ++AL L + +
Sbjct: 15 KINVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRD------ 68
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
+DLIITDY MPGM G +L K+I
Sbjct: 69 ---NIDLIITDYYMPGMNGLQLKKQI---------------------------------- 91
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDY 199
+ +PV++MSS+ + + L GA FI KP+ +D+ +I +
Sbjct: 92 -----------TQEFGNLPVLVMSSD--TNKEEESLSCGAMGFIPKPIHPTDLTKIYQF 137
>gi|39656345|gb|AAR29895.1| putative histidine kinase HHK16p [Cochliobolus heterostrophus]
gi|451998081|gb|EMD90546.1| hypothetical protein COCHEDRAFT_79388 [Cochliobolus heterostrophus
C5]
Length = 1251
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 42/167 (25%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
T+++HVL V+D+ +++K++ + LT + C D+G AL +L + + N G+ +
Sbjct: 1108 TQQLHVLVVEDNHLNQKILCKQLTKAGCITATADNGVHALDYLTKTQFCTPN---GIPLS 1164
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+++ D MP M G +KI+
Sbjct: 1165 MVLMDCEMPEMDGLTCCRKIR--------------------------------------- 1185
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
+EQ L +P++ +++ +ID E G +D I KP ++ ++
Sbjct: 1186 EMEQRKQVLGHVPIIAVTANIRCGQIDEARESGMDDVIGKPFRIPEL 1232
>gi|153869727|ref|ZP_01999263.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
gi|152073808|gb|EDN70738.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
Length = 207
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 69/171 (40%), Gaps = 53/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDDS V V+ LT++ KV SG ALQF+ N K DLI+ D
Sbjct: 7 ILIVDDSAVSTTVLSHFLTLNDFKVLVERSGDEALQFM--------NSASS-KPDLILLD 57
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPG++G+E K++K T
Sbjct: 58 VMMPGISGFETCKELKQNTK---------------------------------------- 77
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV-KRIKDYLT 201
+EIP++ M++ + + E GA D++ KP + +V RI +LT
Sbjct: 78 ---TQEIPIIFMTALSDTGDKIKAFELGAVDYVTKPFQQEEVLARINTHLT 125
>gi|433650285|ref|YP_007295287.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Mycobacterium smegmatis JS623]
gi|433300062|gb|AGB25882.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Mycobacterium smegmatis JS623]
Length = 369
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 62/175 (35%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLAVDD + K+++ +LT +V SG ALQ L ++ +DL++ D
Sbjct: 7 VLAVDDQLTNLKLLDAVLTPRGHRVLTAQSGAEALQLLETED-----------IDLVLLD 55
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M GYE+ ++I+ FL
Sbjct: 56 ILMPQMDGYEVCRRIRSIPATEFL------------------------------------ 79
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP-------VKLSDVKRIKDY 199
PVV++++ R+ LE GA+DF+ KP +++ + RIK Y
Sbjct: 80 -------PVVMITASGSEQRLA-ALEAGADDFVTKPFDKSELLARVASLTRIKRY 126
>gi|430748143|ref|YP_007207272.1| PAS domain-containing protein [Singulisphaera acidiphila DSM 18658]
gi|430019863|gb|AGA31577.1| PAS domain S-box [Singulisphaera acidiphila DSM 18658]
Length = 1519
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 52/173 (30%)
Query: 24 PSDTEEVH---VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
P + E+VH VL VDD+ +R+++E +LT K T V GR A+ L E +
Sbjct: 1110 PVEPEQVHGLPVLIVDDNATNRRILEEMLTNWGMKPTTVAGGREAIATLA--EARGA--- 1164
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
G L++ D MPGM G+ L ++IK
Sbjct: 1165 -GRPFALVLLDAMMPGMDGFTLAEQIK--------------------------------- 1190
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
QD SAL ++++SS N RC E G +++KP++ S +
Sbjct: 1191 ---------QD-SALTGSTLMMLSSANRREDAARCQELGVATYLMKPIRESSL 1233
>gi|146307874|ref|YP_001188339.1| putative CheW protein [Pseudomonas mendocina ymp]
gi|421506249|ref|ZP_15953174.1| putative CheW protein [Pseudomonas mendocina DLHK]
gi|145576075|gb|ABP85607.1| putative CheW protein [Pseudomonas mendocina ymp]
gi|400343031|gb|EJO91416.1| putative CheW protein [Pseudomonas mendocina DLHK]
Length = 310
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK-VDLII 89
HVL VDDS V RK + R L +VTA++ GR AL +L ++ + G D K + ++I
Sbjct: 180 HVLIVDDSSVARKQVSRCLQTVGVEVTALNDGREALNYL---KKMADEGRDPDKELLMLI 236
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
+D MP M GY L +I+ + L+ I++ +L +F
Sbjct: 237 SDIEMPEMDGYTLTTEIRSDSRMQKLH--ILLHTSLSGVF 274
>gi|409438237|ref|ZP_11265324.1| Sensor protein [Rhizobium mesoamericanum STM3625]
gi|408750103|emb|CCM76491.1| Sensor protein [Rhizobium mesoamericanum STM3625]
Length = 944
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P + + HVL VDD+ V+R+++ L + A + G A L E GL
Sbjct: 647 PVNVKGAHVLVVDDNAVNRQILTEQLALWGFDGAAAEDGPAAFAVLEAAHEF------GL 700
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNL 128
VD ++ DY +PGM G E+ +K++ + F L I+FL ++
Sbjct: 701 AVDAVVLDYQIPGMNGAEIARKLRADSRFERL---AIIFLTSMDM 742
>gi|418294749|ref|ZP_12906631.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379066114|gb|EHY78857.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 754
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D + +L VDD R+V +L VT +SG ALQ L D ++V
Sbjct: 630 DNSQHSILLVDDDHSVREVTALMLQDLGFAVTEAESGAHALQLLASD----------IEV 679
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTP 111
DL++ D+ MPGM G EL + +V P
Sbjct: 680 DLLLADFAMPGMNGGELARAARVRHP 705
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 53/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVL VDD + R V ++L +VT +SG A++ L G + +L++
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLR----------RGTEFNLLL 100
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP + G +LL+ ++ + F+
Sbjct: 101 TDVMMPDIDGPKLLQHVRHHSQFS------------------------------------ 124
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++PV++MS+ + C+ GA+D+++KPV + VK + ++ R
Sbjct: 125 -------QLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHVWR 170
>gi|373458202|ref|ZP_09549969.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
gi|371719866|gb|EHO41637.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
Length = 748
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 53/163 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
++VL +DD+ ++R +++L + +VT +S +AL+ L ++ + DLII
Sbjct: 482 LNVLLIDDNPINRSYFQKILEKNKLQVTTAESAFKALEILKTNQ----------RFDLII 531
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M G+EL +I+ +
Sbjct: 532 TDAQMPEMDGFELSTQIRALKNY------------------------------------- 554
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 192
+++P+++++S + +RC + G ++ KPVKL+D
Sbjct: 555 ------KKVPIILLTSSGMRGDSERCKQIGINAYLPKPVKLTD 591
>gi|372273146|ref|ZP_09509194.1| response regulator receiver modulated CheW protein [Marinobacterium
stanieri S30]
Length = 313
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG-- 70
+SDE+ ++ E HVL VDDS V R ++R L KV+ ++GR+ALQ L
Sbjct: 165 VSDEVATHEVRERAREH-HVLIVDDSAVARNQMQRSLEDLGVKVSVANNGRQALQMLHEL 223
Query: 71 LDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLY 116
LD + + ++I+D MP M GY L I+ T + L+
Sbjct: 224 LDRQVDVEKL----FLMVISDIEMPEMDGYTLTSMIREDTRMSKLH 265
>gi|392544812|ref|ZP_10291949.1| sensor histidine kinase [Pseudoalteromonas rubra ATCC 29570]
Length = 1387
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 54/168 (32%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P D HVL VDD + + +LL VT D+G+ AL+ L E+
Sbjct: 1253 PVDLSGFHVLLVDDDLRNTYALSKLLKEQGLDVTMADNGQLALEKLQQSEQ--------- 1303
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
DL++ D MP M G+E ++ I+
Sbjct: 1304 -FDLVLMDIMMPIMDGFEAMRHIRADIS-------------------------------- 1330
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 191
+ +P++ ++++ + RCLE GA D++ KPV ++
Sbjct: 1331 ------------QSLPIIALTAKAMSEDKQRCLEAGASDYLAKPVDIN 1366
>gi|430743735|ref|YP_007202864.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Singulisphaera acidiphila DSM 18658]
gi|430015455|gb|AGA27169.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Singulisphaera acidiphila DSM 18658]
Length = 150
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSC--KVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
H+L V+DS D +IER L + ++T + GR+A+ +L + + GL+ DLI
Sbjct: 6 HILLVEDSRADVMIIERALHDGNVPHRLTVIHDGRKAIDYLV--RLRDVKSDPGLEPDLI 63
Query: 89 ITDYCMPGMTGYELLKKIK 107
+ D +PG+ GY++L +IK
Sbjct: 64 LLDLNLPGIDGYQVLTQIK 82
>gi|409992372|ref|ZP_11275566.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
gi|291568228|dbj|BAI90500.1| two-component hybrid sensor and regulator [Arthrospira platensis
NIES-39]
gi|409936762|gb|EKN78232.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
Length = 1336
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 56/206 (27%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
G LSP D+ + +L VDD ++ +V+ L + + VT +G AL+ L
Sbjct: 861 GSKLSP-DSNQFKILIVDDDPINLQVLANYLYLENYAVTQATNGMEALEILE-------- 911
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
G DLI+ D MP MTGYE+ +KI+ P +
Sbjct: 912 --SGFIPDLILLDVMMPRMTGYEVTEKIREDWPPH------------------------- 944
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIK 197
++P+++++++N ++ + LE GA D++ KP+ + + RIK
Sbjct: 945 ------------------QLPIMMLTAKNRISDLVVGLELGANDYLSKPLNKEELLARIK 986
Query: 198 DYLTRDVNLGNEGRGINKRKARESCD 223
++ R L E I K R D
Sbjct: 987 THI-RIKKLRTEKAHIRKTFGRYVTD 1011
>gi|428215705|ref|YP_007088849.1| ATPase [Oscillatoria acuminata PCC 6304]
gi|428004086|gb|AFY84929.1| putative ATPase [Oscillatoria acuminata PCC 6304]
Length = 2263
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 54/173 (31%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E +L VDD ++ +V+ L++ + + +G AL + +GL+ DLI
Sbjct: 1848 EFQILIVDDEPINLQVLVNHLSLENYAIATASNGPEALAEME----------NGLRPDLI 1897
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+ D MP MTGYE+ ++I+ FP+N
Sbjct: 1898 LLDVMMPKMTGYEVCQRIREK---------------------------------FPAN-- 1922
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
E+PVV++++ N + + GA D++ KP+ ++ + RIK ++
Sbjct: 1923 --------ELPVVLLTARNQASDMMEAFGSGANDYLTKPISKNELLARIKMHI 1967
>gi|381160286|ref|ZP_09869518.1| PAS domain S-box [Thiorhodovibrio sp. 970]
gi|380878350|gb|EIC20442.1| PAS domain S-box [Thiorhodovibrio sp. 970]
Length = 1126
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 11/77 (14%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL +DD+ + K+I+ +L + T VD+G AL FL ++Q+ VD+ I
Sbjct: 659 HVLVIDDNLNNGKIIQDMLELVGVPCTTVDNGLAALSFL---QQQA--------VDIAIV 707
Query: 91 DYCMPGMTGYELLKKIK 107
DY MP M G E++ KI+
Sbjct: 708 DYQMPFMDGLEVIGKIR 724
Score = 44.3 bits (103), Expect = 0.052, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 68/190 (35%)
Query: 74 EQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFIL 133
E+++ F DL++ D MPGM GY+ +I+
Sbjct: 868 EEAVRHFTKNTPDLVLMDVQMPGMNGYDATGQIRA------------------------- 902
Query: 134 SICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
+ R +P++ +++ + +RCL+ G +D++ KP+ +
Sbjct: 903 ------------------RESGRRVPIIALTAGTLKGEKERCLQAGMDDYLTKPIAADQL 944
Query: 194 KR-IKDYLTRDVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPSSPSSPFRSPSILS 252
+ ++ +LTR + + LS+ PS SSS S + S
Sbjct: 945 RECLQHWLTR----------------QPAPQLSTPAPSTPVPSSSASD--------ELAS 980
Query: 253 SSAPCSPPST 262
S+ P PP++
Sbjct: 981 SAPPKQPPAS 990
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 54/171 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
++ DDS R V+ LL S +V +G +A + L E N +DLI+T+
Sbjct: 85 LVEYDDST--RHVVTALLRNCSYEVIDAANGLQAWKIL----EDLTN-----HIDLILTE 133
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPG++G LL KI + T
Sbjct: 134 VAMPGLSGIGLLYKI-------MGHKT--------------------------------- 153
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPVV+MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 154 ---RKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 201
>gi|345871972|ref|ZP_08823913.1| response regulator receiver modulated CheW protein [Thiorhodococcus
drewsii AZ1]
gi|343919783|gb|EGV30526.1| response regulator receiver modulated CheW protein [Thiorhodococcus
drewsii AZ1]
Length = 308
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDDS V RK +ER + + GR AL+FL EE + ++++ITD
Sbjct: 182 ILIVDDSLVARKQVERAIVELGFRTETRSDGRAALEFL---EELAAEDAVDTSIEMVITD 238
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
MP M GY L +KI+ + L
Sbjct: 239 IEMPRMDGYTLTRKIRENSKLKHL 262
>gi|392556611|ref|ZP_10303748.1| two-component response regulator [Pseudoalteromonas undina NCIMB
2128]
Length = 311
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 56/170 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD ++R ++ER L+ +V V SG AL F+ +VDLII D
Sbjct: 7 ILIVDDDALNRIILERTLS-DEHEVYLVASGEEALTFV-----------KHTQVDLIILD 54
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM GY++L ++K + S+ P F S N +
Sbjct: 55 IMMPGMNGYDVLVELKES------------------------SLSHAIPIIFISANSSHE 90
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
A + LE GA D+IVKP S VK R+++ L
Sbjct: 91 DEA-------------------KGLELGAMDYIVKPFCASIVKVRVRNQL 121
>gi|153870115|ref|ZP_01999582.1| adenylate/guanylate cyclase [Beggiatoa sp. PS]
gi|152073419|gb|EDN70418.1| adenylate/guanylate cyclase [Beggiatoa sp. PS]
Length = 396
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 80/183 (43%), Gaps = 55/183 (30%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
GF+ + E+ HVL VDD ++ +++E L + + +T +G AL+ L
Sbjct: 240 GFN-TVQGREDFHVLIVDDDPINLQILENQLRVENYAITRATTGHDALKALE-------- 290
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
G+ +I+ D MP M+G+E+ + I+ T P N
Sbjct: 291 --SGIPFAIILLDIMMPKMSGFEVCQIIRQTYPAN------------------------- 323
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIK 197
++P+++++++N ++ + + ++ GA D++ KP + + RIK
Sbjct: 324 ------------------QLPIIMLTAKNQVSDLVQGMQAGANDYLTKPFSKGELITRIK 365
Query: 198 DYL 200
++
Sbjct: 366 THI 368
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A Q L ++ Q+ +DL++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL--EDLQN-------HIDLVLTE 133
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI IC
Sbjct: 134 VVMPRLSGIGLLSKITS------------------------HKIC--------------- 154
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 155 ----KDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 201
>gi|428209660|ref|YP_007094013.1| CheA signal transduction histidine kinase [Chroococcidiopsis
thermalis PCC 7203]
gi|428011581|gb|AFY90144.1| CheA signal transduction histidine kinase [Chroococcidiopsis
thermalis PCC 7203]
Length = 888
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 15/121 (12%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEV-HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRAL 66
A++R S + F + TEE+ +L VDD+ R+++ER+LT + KV G+ AL
Sbjct: 744 ATIRQESSRQETFS---ATTEEIPKILIVDDAIAFRRILERILTAAGYKVVQCRDGQEAL 800
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQ 126
+ L EE + DL I+D MP + G LL++I+ ++ + L +IV + +
Sbjct: 801 EKLSSSEE---------RFDLAISDLEMPRVDGLSLLREIRASSQWQKL--PVIVLTSRE 849
Query: 127 N 127
N
Sbjct: 850 N 850
>gi|301061357|ref|ZP_07202137.1| PAS domain S-box protein [delta proteobacterium NaphS2]
gi|300444534|gb|EFK08519.1| PAS domain S-box protein [delta proteobacterium NaphS2]
Length = 492
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 56/164 (34%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
++ HVL VDD V R R+L+ ++T ++G +AL+ LG + +D
Sbjct: 2 AKKTHVLVVDDEKVVRDGCRRVLSGRGYEITTAENGSQALEILGAEH-----------ID 50
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
+++ D MP M+G E+L++ + T P
Sbjct: 51 ILLLDLKMPVMSGEEVLERTRDTHP----------------------------------- 75
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKL 190
+IPV++++ + C++ GA DFI KP ++
Sbjct: 76 ----------DIPVIVITGHGTVDTAVECMKKGAYDFITKPFQI 109
>gi|357010943|ref|ZP_09075942.1| two-component hybrid sensor and regulator [Paenibacillus elgii B69]
Length = 1037
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 54/167 (32%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+++++LAVDD V+ KV+ +L+ V V SG+ AL+ L D DL
Sbjct: 702 DKMNILAVDDDPVNLKVLVGILSTEPYHVRTVSSGQEALELL-----------DTEPWDL 750
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
+I D MP M+GYEL ++++ YS
Sbjct: 751 LIADVMMPHMSGYELTRRVRTH------YS------------------------------ 774
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
+ E+PV+++++ + A I GA D++ KPV ++K
Sbjct: 775 -------ISELPVLLLTARSQPADIYTGFLSGANDYVTKPVDALELK 814
>gi|451849751|gb|EMD63054.1| hypothetical protein COCSADRAFT_120032 [Cochliobolus sativus ND90Pr]
Length = 1356
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 66/274 (24%)
Query: 4 TNGVASLRLISDEI-DGF-DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDS 61
+NG ++ + I D F LS S+ + VHVL V+D+ +++++ + + V AV +
Sbjct: 1008 SNGTSAYPMFKSAIPDQFMSLSESERQNVHVLVVEDNHINQQIALKTIKKLHFSVNAVWN 1067
Query: 62 GRRALQFLGLDEEQSINGFDGL--KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
G+ AL++L + F L + D+I+ D MP GY I+ P+
Sbjct: 1068 GQEALEYLAKE-------FGPLHPRPDIILMDVQMPIRDGYSATHAIRTEAPW------- 1113
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
++ ++ +P+V M++ I ++C+ G
Sbjct: 1114 ------------------------------RNMPKVQGVPIVAMTASAIQGDKEKCVSCG 1143
Query: 180 AEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPS 239
+D++ KPVK ++++ V EGR ++ ARE + T+
Sbjct: 1144 MDDYLAKPVKGKILEKML------VKWALEGR---RKAARE---------TPCTNDKDRR 1185
Query: 240 SPSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMT 273
S + P S +S P + +L+S T+ +T
Sbjct: 1186 SKTVPNPGNSFSASDHPRTAGMSLESETTAQALT 1219
>gi|291278839|ref|YP_003495674.1| two-component system, chemotaxis family, sensor kinase CheA
[Deferribacter desulfuricans SSM1]
gi|290753541|dbj|BAI79918.1| two-component system, chemotaxis family, sensor kinase CheA
[Deferribacter desulfuricans SSM1]
Length = 694
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSC-KVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
T +++V+ VDDS DRK+++RLL + V + +G+ AL L++
Sbjct: 570 TNKMNVMVVDDSATDRKIMKRLLNNTGWLNVVEITNGKDALA-----------AIKNLQI 618
Query: 86 DLIITDYCMPGMTGYELLKKIK 107
D +ITD MP M GYEL K ++
Sbjct: 619 DFVITDVFMPDMDGYELAKSLR 640
>gi|410663017|ref|YP_006915388.1| chemotaxis protein CheV [Simiduia agarivorans SA1 = DSM 21679]
gi|409025374|gb|AFU97658.1| chemotaxis protein CheV [Simiduia agarivorans SA1 = DSM 21679]
Length = 332
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 13 ISDEIDGFDLSPSDTEEV---HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL 69
I++EI + E V HVL DDS + RK I+R++ K T GR AL+FL
Sbjct: 174 INEEISAGVIEDGIAERVVQKHVLIADDSTIARKQIQRVIESMGLKTTLCKDGREALEFL 233
Query: 70 -GLDEEQSINGFDGLKVD----LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLN 124
GL +E G KV L+I+D MP M GY +++ L+ II+ +
Sbjct: 234 EGLAKE-------GKKVSEELLLVISDIEMPEMDGYTFTAEVRANPALKDLH--IILHTS 284
Query: 125 LQNLF 129
L +F
Sbjct: 285 LSGVF 289
>gi|328877192|pdb|3MM4|A Chain A, Crystal Structure Of The Receiver Domain Of The Histidine
Kinase Cki1 From Arabidopsis Thaliana
gi|328877193|pdb|3MMN|A Chain A, Crystal Structure Of The Receiver Domain Of The Histidine
Kinase Cki1 From Arabidopsis Thaliana Complexed With
Mg2+
Length = 206
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 24 PSDTE---EVHVLAVDDSFVDRKVIE-RLLTISSCKVTAVDSGRRALQFL--GLDEEQSI 77
PSD E VL VDD+F+ RKV +L + +V DSG+ AL+ + GL + +
Sbjct: 53 PSDDEFLRGKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQ 112
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
D L D I D MP M GYE ++I+
Sbjct: 113 GSVDKLPFDYIFMDCQMPEMDGYEATREIR 142
>gi|392308986|ref|ZP_10271520.1| two-component response regulator [Pseudoalteromonas citrea NCIMB
1889]
Length = 300
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 56/171 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD ++R V++ L+ +++ +S +AL FL + KVDLII+D
Sbjct: 7 ILIVDDDPLNRVVLDNTLS-EEYQISQCESAEQALTFLADN-----------KVDLIISD 54
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM+GY+LL+++K +Q
Sbjct: 55 IRMPGMSGYDLLERLKA----------------------------------------KQH 74
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLT 201
+ A IPV+I+S+ N + L+ GA D+I KP VK R+K++L
Sbjct: 75 TYA---IPVIIISASNSYNDEAKGLQMGAMDYITKPFSPLIVKARVKNHLA 122
>gi|347836543|emb|CCD51115.1| histidine kinase-group XI protein, partial sequence [Botryotinia
fuckeliana]
Length = 631
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 50/203 (24%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI----- 77
SP+ + H+L V+D+ V++KV+ + L + C V+ + G AL+FL E+S
Sbjct: 462 SPASSAPKHILIVEDNIVNQKVLSKQLRSAGCIVSVANHGLEALEFL----EKSTFSTSL 517
Query: 78 -NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSIC 136
G G+ ++++ D MP M G +++I+
Sbjct: 518 PEGVSGIPCNILLMDLEMPIMDGLTCVRQIR----------------------------- 548
Query: 137 FCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKR 195
E++ +PV+ +++ +I R E G + + KP ++ + V
Sbjct: 549 ----------KWEREGRVKGRVPVIAVTANARSEQIARAKEAGMDSVVTKPFRIGELVPE 598
Query: 196 IKDYLTRDVNLGNEGRGINKRKA 218
++ +L R V L G +A
Sbjct: 599 MERWLIRGVVLDRAKEGARDERA 621
>gi|325284790|ref|YP_004264253.1| CheA signal transduction histidine kinase [Deinococcus proteolyticus
MRP]
gi|324316279|gb|ADY27393.1| CheA signal transduction histidine kinase [Deinococcus proteolyticus
MRP]
Length = 1136
Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDDS R+++ R+L +V + G+ AL L LD + DL+I+D
Sbjct: 1017 VLLVDDSLSVRRLVSRMLERGGYEVVTANDGQEALDLLQLDT----------RFDLVISD 1066
Query: 92 YCMPGMTGYELLKKIK 107
MP M GYELL ++
Sbjct: 1067 LEMPRMNGYELLSALR 1082
>gi|163644182|dbj|BAF95741.1| ethylene receptor homolog [Physcomitrella patens]
Length = 777
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
L+ D + + VL DD+ V+R V +RLL C T V+SG++ L L Q +GF
Sbjct: 633 QLNKEDLKGLKVLVTDDNSVNRIVTKRLLDRLGCYTTVVESGQQCLAAL----SQPGSGF 688
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIK 107
L +DL CMP M GYE+ + IK
Sbjct: 689 RVLLLDL-----CMPEMDGYEVARIIK 710
>gi|406998918|gb|EKE16744.1| hypothetical protein ACD_10C00825G0003 [uncultured bacterium]
Length = 322
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG--LDEEQSINGFD 81
P D +V V DDS V RK IER L + K + +GR+ + + QSI
Sbjct: 177 PLDRPDVTVFYCDDSSVARKQIERTLAVMGVKSVSAVNGRQMWEEMEKIASYAQSIGQSA 236
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFN 113
+ L++TD MP M GY L KKIK FN
Sbjct: 237 SSVISLVLTDIEMPEMDGYILTKKIKSDARFN 268
>gi|168033977|ref|XP_001769490.1| ETR2 ethylene receptor [Physcomitrella patens subsp. patens]
gi|162679201|gb|EDQ65651.1| ETR2 ethylene receptor [Physcomitrella patens subsp. patens]
Length = 753
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
L+ D + + VL DD+ V+R V +RLL C T V+SG++ L L Q +GF
Sbjct: 609 QLNKEDLKGLKVLVTDDNSVNRIVTKRLLDRLGCYTTVVESGQQCLAALS----QPGSGF 664
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIK 107
L +DL CMP M GYE+ + IK
Sbjct: 665 RVLLLDL-----CMPEMDGYEVARIIK 686
>gi|344345123|ref|ZP_08775980.1| response regulator receiver modulated CheW protein [Marichromatium
purpuratum 984]
gi|343803380|gb|EGV21289.1| response regulator receiver modulated CheW protein [Marichromatium
purpuratum 984]
Length = 310
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDDS V RK IER + +V GR AL FL EE + G ++++I+D
Sbjct: 181 ILVVDDSMVARKQIERAIGEIGFQVETRSDGRAALDFL---EELAETGDVSETIEMVISD 237
Query: 92 YCMPGMTGYELLKKIK 107
MP M GY L +KI+
Sbjct: 238 IEMPRMDGYTLTRKIR 253
>gi|392423317|ref|YP_006459921.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri CCUG 29243]
gi|390985505|gb|AFM35498.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri CCUG 29243]
Length = 801
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D + +L VDD R+V +L VT DSG ALQ L D ++V
Sbjct: 677 DNAQHSILLVDDDPSVREVTALMLQDLGFAVTEADSGDHALQLLAGD----------IEV 726
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTP 111
DL++ D+ MPGM G EL + ++ P
Sbjct: 727 DLLLADFAMPGMNGGELARAVRTRNP 752
>gi|424071140|ref|ZP_17808566.1| Signal transduction histidine kinase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999451|gb|EKG39835.1| Signal transduction histidine kinase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 1188
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 12 LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL 71
L +DE+ +P DT +H+L VDD +R V+ R L +VTAV+ G+ AL
Sbjct: 931 LPADEVTD---TPVDTRSLHLLVVDDMSANRLVLTRQLEFLGHQVTAVEDGKAALS---- 983
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ +G D +ITD MPG++GY L + I+
Sbjct: 984 ------SWCEG-AFDAVITDCNMPGISGYALTQAIR 1012
>gi|119490790|ref|ZP_01623122.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
gi|119453774|gb|EAW34932.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
Length = 1111
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 54/176 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D+ E +L VDD V+ +VI L++ + +T +G AL + G K
Sbjct: 712 DSGEFKILVVDDEPVNIQVIANNLSLQNYAITQATNGLEALTLIE----------KGFKP 761
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DLI+ D MP MTGYE+ +K++ +L+S
Sbjct: 762 DLILLDVMMPRMTGYEVCQKLRE----KYLHS---------------------------- 789
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
E+P+++++++N + + L GA D++ KP + + RIK +L
Sbjct: 790 -----------ELPILMLTAKNQVTDLVDGLSSGANDYLSKPFSKQELLARIKTHL 834
>gi|304309736|ref|YP_003809334.1| histidine kinase [gamma proteobacterium HdN1]
gi|301795469|emb|CBL43667.1| predicted histidine kinase [gamma proteobacterium HdN1]
Length = 658
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 47/167 (28%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P DT ++H+L V+D+ V++ VI L C V ++G+ + LG D + F
Sbjct: 505 PDDTLKLHILVVEDNKVNQMVINGYLKKMGCSVEVANNGQEGVDRLG-DTTTNRPSF--- 560
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
DLI+ D MP M G+E ++I+ P
Sbjct: 561 --DLILMDCQMPVMDGFEATRRIR------------------------------ALP--- 585
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKL 190
+ AL +P++ +++ + +RCL+ G D++ KP+ L
Sbjct: 586 --------NPALAALPIIAVTANAMEGDRERCLQAGMNDYLSKPIDL 624
>gi|329922247|ref|ZP_08277949.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328942284|gb|EGG38554.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1049
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 71/178 (39%), Gaps = 58/178 (32%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
PSD +L VDD V+ KVI LL ++ AV ALQ L EQ
Sbjct: 716 PSDGR---LLIVDDDPVNLKVIHHLLADEGYRIVAVTRAEEALQLL----EQG------- 761
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
+ DLII+D MP M+GYEL + I+
Sbjct: 762 EWDLIISDVMMPQMSGYELSRTIR------------------------------------ 785
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
L E+P++++++ N I GA D+++KPV ++K R++ L
Sbjct: 786 -------QRYMLSELPILLLTARNRPEDIHMGFISGANDYLIKPVDHLELKTRVRALL 836
>gi|424909943|ref|ZP_18333320.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845974|gb|EJA98496.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 440
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD+ R + +L + KV+ SG RAL+ L D + L+ITD
Sbjct: 136 VLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEILAQDP----------SIQLVITD 185
Query: 92 YCMPGMTGYELLKKIK 107
Y MP M GYEL ++I+
Sbjct: 186 YHMPDMDGYELTRRIR 201
>gi|434406173|ref|YP_007149058.1| signal transduction histidine kinase [Cylindrospermum stagnale PCC
7417]
gi|428260428|gb|AFZ26378.1| signal transduction histidine kinase [Cylindrospermum stagnale PCC
7417]
Length = 1165
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 54/174 (31%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
++ E +L VDD V+R+V+ L++ + ++T SG AL L GLK
Sbjct: 726 TNNPEWSILIVDDEPVNRQVLVNHLSLYNYEITEAASGIEALAILE----------GGLK 775
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
DLI+ D MP MTGY++ ++I+ T +
Sbjct: 776 PDLILLDVMMPRMTGYDVTRQIRQTWQAS------------------------------- 804
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIK 197
E+P+V++++ N ++ + E GA D++ KP+ + + RIK
Sbjct: 805 ------------ELPIVLLTARNQVSDLVVGFEAGANDYLTKPISKDELLARIK 846
>gi|86607232|ref|YP_475995.1| response regulator [Synechococcus sp. JA-3-3Ab]
gi|86555774|gb|ABD00732.1| response regulator [Synechococcus sp. JA-3-3Ab]
Length = 332
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG-LDEEQSINGFDGLKVDLIIT 90
+ +DD V+R+ I +L S+ +V + +SG+ A + L LDE + DLII
Sbjct: 8 IWVIDDDPVNRRYIGEVLKSSNYRVESWESGQLAWEHLQTLDESEW--------PDLIIC 59
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTII 120
D+ MPG++G EL +++K F+Y ++
Sbjct: 60 DWVMPGLSGVELCRRLKNLPAGQFIYFILL 89
>gi|302846523|ref|XP_002954798.1| volvoxopsin-5, sensory rhodopsin with histidine kinase domain
[Volvox carteri f. nagariensis]
gi|300259981|gb|EFJ44204.1| volvoxopsin-5, sensory rhodopsin with histidine kinase domain
[Volvox carteri f. nagariensis]
Length = 1238
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
++V VL+VDD V++ VI+ LL ++ G+ ALQ L +E D+
Sbjct: 759 DKVRVLSVDDDPVNQLVIQNLLAPVGYEILQAMDGQEALQVLKSEERLP---------DV 809
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFN 113
I+ D MPGM+GYE+ +K++ P +
Sbjct: 810 ILLDVMMPGMSGYEVCRKLREMYPLS 835
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A Q L E N +DL++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQN-----HIDLVLTE 133
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI IC
Sbjct: 134 VVMPRLSGIGLLSKITS------------------------HKIC--------------- 154
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 155 ----KDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 201
>gi|408788802|ref|ZP_11200516.1| two component response regulator [Rhizobium lupini HPC(L)]
gi|408485240|gb|EKJ93580.1| two component response regulator [Rhizobium lupini HPC(L)]
Length = 440
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD+ R + +L + KV+ SG RAL+ L D + L+ITD
Sbjct: 136 VLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEILAQDP----------SIQLVITD 185
Query: 92 YCMPGMTGYELLKKIK 107
Y MP M GYEL ++I+
Sbjct: 186 YHMPDMDGYELTRRIR 201
>gi|78186193|ref|YP_374236.1| PAS/PAC sensor hybrid histidine kinase [Chlorobium luteolum DSM
273]
gi|78166095|gb|ABB23193.1| PAS/PAC sensor hybrid histidine kinase [Chlorobium luteolum DSM
273]
Length = 967
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 76/202 (37%), Gaps = 67/202 (33%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLT-------ISSCKVTAVDSGRRALQFLGL 71
G PS ++VL V+DS V+R V +L ++ C A+++ RR
Sbjct: 699 GASQPPSAASPLNVLVVEDSMVNRNVAVSMLKKLGYSPDVAVCGTAALEAMRRK------ 752
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLF 131
DL+ D MP M GYE + I+
Sbjct: 753 ------------AYDLVFMDCQMPEMDGYEATRHIRE----------------------- 777
Query: 132 ILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 191
++D R +PVV M++ + ++C+ G +D+I KP++ S
Sbjct: 778 -----------------DEDLKGSRSVPVVAMTANAMKGDREKCINAGMDDYIAKPLRKS 820
Query: 192 DVKRIKD--YLTRDVNLGNEGR 211
D K I D + D +L +GR
Sbjct: 821 DFKTIMDRYFPGMDRSLSEDGR 842
>gi|46581622|ref|YP_012430.1| sigma-54 dependent transcriptional regulator/response regulator
[Desulfovibrio vulgaris str. Hildenborough]
gi|387154820|ref|YP_005703756.1| two component Fis family sigma54-specific transcriptional regulator
[Desulfovibrio vulgaris RCH1]
gi|46451045|gb|AAS97690.1| sigma-54 dependent transcriptional regulator/response regulator
[Desulfovibrio vulgaris str. Hildenborough]
gi|311235264|gb|ADP88118.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio vulgaris RCH1]
Length = 459
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+E H+L +DD V+E LLT + VTA++ AL FL E+S +VD
Sbjct: 2 SETTHILVIDDEKNYLLVLEALLTDAGYAVTALNDPETALAFL----EES-------EVD 50
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPF 112
++ITD MP +TG E+L+++K T P
Sbjct: 51 VVITDMKMPRVTGREVLERVKKTWPH 76
>gi|120601219|ref|YP_965619.1| Fis family transcriptional regulator [Desulfovibrio vulgaris DP4]
gi|120561448|gb|ABM27192.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio vulgaris DP4]
Length = 459
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+E H+L +DD V+E LLT + VTA++ AL FL E+S +VD
Sbjct: 2 SETTHILVIDDEKNYLLVLEALLTDAGYAVTALNDPETALAFL----EES-------EVD 50
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPF 112
++ITD MP +TG E+L+++K T P
Sbjct: 51 VVITDMKMPRVTGREVLERVKKTWPH 76
>gi|17547798|ref|NP_521200.1| composite two component sensor histidine kinase and response
regulator hybrid transcription regulator protein
[Ralstonia solanacearum GMI1000]
gi|17430103|emb|CAD16788.1| probable composite two component regulatory (sensor histidine
kinase and response regulator hybrid) transcription
regulator protein [Ralstonia solanacearum GMI1000]
Length = 994
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 56/194 (28%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
++T +H+L +D ++R++I R L + +VT + G ALQ L +
Sbjct: 730 AETPGMHILVAEDHPINRELITRQLRLLGYRVTLAEDGAAALQRLC-----------ETR 778
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
D ++TD CMP + G++L ++I+
Sbjct: 779 FDALLTDCCMPRLDGFDLARQIR------------------------------------- 801
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDV 204
EQ + R +P++ +++ + RC G + +++KP L+ ++D L+R
Sbjct: 802 --QREQQAPGGRRLPILAITATTLAEEHARCRTVGMDGYVLKPTTLAT---LQDALSR-- 854
Query: 205 NLGNEGRGINKRKA 218
LGN + KA
Sbjct: 855 -LGNAAVSPDAAKA 867
>gi|357450665|ref|XP_003595609.1| Two-component response regulator ARR17 [Medicago truncatula]
gi|355484657|gb|AES65860.1| Two-component response regulator ARR17 [Medicago truncatula]
Length = 125
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG 70
HVLAVDD+ +DR ++E+ L SSCKVT ++ +AL+++G
Sbjct: 52 HVLAVDDNIIDRTLVEKHLKNSSCKVTTAENRLKALEYIG 91
>gi|288940404|ref|YP_003442644.1| response regulator receiver modulated CheW protein [Allochromatium
vinosum DSM 180]
gi|288895776|gb|ADC61612.1| response regulator receiver modulated CheW protein [Allochromatium
vinosum DSM 180]
Length = 307
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDDS V RK IER +T + + G+ AL++L EE + ++L+I D
Sbjct: 182 ILVVDDSLVARKQIERAITALGFRTESRSDGKAALEYL---EELAEADMVDASIELVIAD 238
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
MP M GY L +KI+ L
Sbjct: 239 IEMPRMDGYTLTRKIREHAKLKHL 262
>gi|414069439|ref|ZP_11405433.1| sensor protein [Pseudoalteromonas sp. Bsw20308]
gi|410808242|gb|EKS14214.1| sensor protein [Pseudoalteromonas sp. Bsw20308]
Length = 1000
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 62/164 (37%), Gaps = 48/164 (29%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D +VL VDD+ ++ +V + +L + K+T G AL+ L L E Q+
Sbjct: 872 DLSNYNVLLVDDNMINVEVAKAILKHTKVKITTASDGLEALEVLKLHEGQTF-------- 923
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+I+ D MP + GY+ I+
Sbjct: 924 DIILMDCQMPNLNGYDTTSAIRSGKA---------------------------------- 949
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
S +P++ M++ + DRCL G D+I KP+K
Sbjct: 950 ------GSEYSYVPIIAMTASAMEGDRDRCLAAGMNDYITKPIK 987
>gi|402078664|gb|EJT73929.1| hypothetical protein GGTG_07783 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1479
Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 44/169 (26%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
DL ++HVL V+D+ +++++ + + V+AV +G+ AL++L E++ +G
Sbjct: 1127 DLDMDARAKIHVLVVEDNAINQEIATKTIKRLGFTVSAVWNGKEALEYL----EKAQDG- 1181
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
L+ D+I+ D MP + GY ++ TP+
Sbjct: 1182 QALRPDIILMDVQMPVIDGYRCTHVLRHHTPYK--------------------------- 1214
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
+ ++ +P+V M++ I ++C + G +D++ KPV+
Sbjct: 1215 ------------AYVKNVPIVAMTASAIQGDREKCRKAGMDDYLAKPVR 1251
>gi|91788256|ref|YP_549208.1| response regulator receiver domain-containing protein [Polaromonas
sp. JS666]
gi|91697481|gb|ABE44310.1| response regulator receiver domain protein (CheY-like) [Polaromonas
sp. JS666]
Length = 159
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 56/170 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD + +++E+LL S+ T V S L+ GL E + DLI+ D
Sbjct: 12 ILVVDDQAANVQLLEQLL--SNTGYTRVRSTMNPLEVAGLHAEH--------RYDLILLD 61
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM G+++++++K T ++L
Sbjct: 62 LKMPGMDGFQVMQELKKNTSDDYL------------------------------------ 85
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
PV+++++E R LE GA+DFI KP L +VK RI + L
Sbjct: 86 -------PVIVLTAEP--GHKLRALEAGAKDFISKPFDLVEVKTRIHNML 126
>gi|374701786|ref|ZP_09708656.1| chemotaxis protein CheW [Pseudomonas sp. S9]
Length = 311
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS V RK + R L +VTA++ GR AL +L ++ D L +II+
Sbjct: 180 HVLIVDDSSVARKQVSRCLQTVGVEVTALNDGREALDYLRKMADEGKRPADELL--MIIS 237
Query: 91 DYCMPGMTGYELLKKIK 107
D MP M GY L I+
Sbjct: 238 DIEMPEMDGYTLTTAIR 254
>gi|428309356|ref|YP_007120333.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428250968|gb|AFZ16927.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 971
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 54/173 (31%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
++ +L VDD ++ +V+ L++ + + SG AL+ + +GL+ DLI
Sbjct: 577 QLTILVVDDEAINLQVVANHLSLQNYGIVQASSGIEALEKI----------HNGLRPDLI 626
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+ D MP M+GY++ +KI+ FP++
Sbjct: 627 LLDIMMPKMSGYQVCQKIREQ---------------------------------FPAS-- 651
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYL 200
E+PVV+++++N ++ + L+ GA D++ KP+ K + RIK ++
Sbjct: 652 --------EMPVVMLTAKNQVSNLVAGLDAGANDYLTKPILKNELLARIKTHI 696
>gi|442609712|ref|ZP_21024446.1| putative two-component hybrid sensor and regulator [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441748728|emb|CCQ10508.1| putative two-component hybrid sensor and regulator [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 1267
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D + +HVL VDD+ +R+VI LT + AVDSGR+AL+ L+E Q+ F
Sbjct: 983 DLKSLHVLVVDDNQTNREVICGQLTNWGIESVAVDSGRQALE--TLNEYQNKRSF----- 1035
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
+L I D MP M G +L + I+ F+ L
Sbjct: 1036 NLAILDMQMPSMDGEQLGRAIREQARFDSL 1065
>gi|428214819|ref|YP_007087963.1| transmembrane sensor domain-containing protein [Oscillatoria
acuminata PCC 6304]
gi|428003200|gb|AFY84043.1| putative transmembrane sensor domain protein [Oscillatoria
acuminata PCC 6304]
Length = 1108
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 54/177 (30%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
S+ E +L VDD ++ +V+ L++ + +T +G +AL+ + +G K
Sbjct: 692 SEGAEFKILIVDDEPINLQVLANTLSLQNYAITRAANGLKALEIIE----------NGFK 741
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
DLI+ D MP MTGYE+ +KI+
Sbjct: 742 PDLILLDVMMPRMTGYEVCEKIR------------------------------------- 764
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
Q +A+ ++P+V+++++N ++ + GA D+++KP ++ + RIK ++
Sbjct: 765 -----QKFAAI-DLPIVMLTAKNQVSDLVEGFSAGANDYLMKPFNKNELLTRIKTHI 815
>gi|325180319|emb|CCA14722.1| protein kinase putative [Albugo laibachii Nc14]
Length = 977
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 48/211 (22%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D EV VL V+D R +L +V AV++G+ AL L +E + K
Sbjct: 2 DPTEVCVLVVEDDEFTRMATIDILRSCRYEVFAVENGKEALD--ALMQEPT-------KY 52
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DL++ D +P M G +LL + F +S
Sbjct: 53 DLVLCDVMLPVMNGIQLLAAMMERNGFTSTHSL--------------------------- 85
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVN 205
AL IPVV+ SS + + CL GA+D+++KP++++ K L R V
Sbjct: 86 --------ALHHIPVVMTSSNEEMDVVTNCLSKGAKDYLIKPIQVNTAKT----LVRHVW 133
Query: 206 LGNEGRGINKRKARESCDLSSSPPSVITSSS 236
L + +S LS S + + S
Sbjct: 134 LSQQQEQQRAFPPNQSASLSFSQNQHLANGS 164
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A Q L E N +DL++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQN-----HIDLVLTE 133
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI IC
Sbjct: 134 VVMPRLSGIGLLSKITS------------------------HKIC--------------- 154
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 155 ----KDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 201
>gi|168004397|ref|XP_001754898.1| ETR6 ethylene receptor protein [Physcomitrella patens subsp.
patens]
gi|162694002|gb|EDQ80352.1| ETR6 ethylene receptor protein [Physcomitrella patens subsp.
patens]
Length = 737
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
+D V +L DD+ V+R V LL C+VT SGR LQ + +Q F
Sbjct: 600 TDCSGVKILVTDDNGVNRMVTRGLLMRLGCEVTLAASGRECLQLI----QQRNQAF---- 651
Query: 85 VDLIITDYCMPGMTGYELLKKIK 107
+L++ D CMP M GYE+ +I+
Sbjct: 652 -NLLLLDVCMPEMDGYEVAVQIQ 673
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ + R V+ LL S +V +G +A + L E N ++DL++T+
Sbjct: 90 VLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRIL----EDLTN-----QIDLVLTE 140
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI
Sbjct: 141 VVMPCLSGIGLLYKI-------------------------------------------MS 157
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ +PV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 158 HKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 208
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|345859615|ref|ZP_08811956.1| his Kinase A domain protein [Desulfosporosinus sp. OT]
gi|344327299|gb|EGW38736.1| his Kinase A domain protein [Desulfosporosinus sp. OT]
Length = 990
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 53/160 (33%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+ VLAVDD + +V++ LLT KV SG A++ + D +DL
Sbjct: 657 QSFKVLAVDDEATNLRVLKSLLTGDGYKVLTASSGIEAIEIIK----------DHDDIDL 706
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++ D MP M+GYE +KI+
Sbjct: 707 VLMDVMMPKMSGYEACRKIR---------------------------------------- 726
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+ +L ++P++I++ N L I E GA DF+ KP
Sbjct: 727 ---EDYSLYDLPLLILTVRNTLEDITVGFEAGANDFVSKP 763
>gi|337285567|ref|YP_004625040.1| response regulator receiver protein [Thermodesulfatator indicus DSM
15286]
gi|335358395|gb|AEH44076.1| response regulator receiver protein [Thermodesulfatator indicus DSM
15286]
Length = 125
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 30 VHVLAVDDSFVDRKVIER-LLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ VL VDD R++I+ LL + + D G A + L G KVDLI
Sbjct: 5 MKVLVVDDFATMRRIIKNILLQLGFKNIIEADDGTTAWEILN----------KGEKVDLI 54
Query: 89 ITDYCMPGMTGYELLKKIK 107
I+D+ MP MTG ELLKK++
Sbjct: 55 ISDWNMPKMTGIELLKKVR 73
>gi|94263977|ref|ZP_01287779.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93455649|gb|EAT05831.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 1211
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
L P D + VL VDD+ R+V+ + L S +V DSGRRAL L E+
Sbjct: 653 LPPVDLRGLRVLVVDDNATARQVLRQTLASFSFRVEEADSGRRALSLLARAAEE------ 706
Query: 82 GLKVDLIITDYCMPGMTGYE 101
G +L+I D+ MP G E
Sbjct: 707 GQPYELVILDWVMPEFDGLE 726
>gi|417860505|ref|ZP_12505561.1| two component response regulator [Agrobacterium tumefaciens F2]
gi|338823569|gb|EGP57537.1| two component response regulator [Agrobacterium tumefaciens F2]
Length = 430
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD+ R + +L + +V+ SG+RAL+ L D + L+ITD
Sbjct: 126 VLVVDDARTARSGLVEILERQNFRVSEAHSGKRALEILSQDP----------SIQLVITD 175
Query: 92 YCMPGMTGYELLKKIK 107
Y MP M GYEL ++I+
Sbjct: 176 YHMPDMDGYELTRRIR 191
>gi|94263691|ref|ZP_01287499.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93455890|gb|EAT06049.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 1211
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
L P D + VL VDD+ R+V+ + L S +V DSGRRAL L E+
Sbjct: 653 LPPVDLRGLRVLVVDDNATARQVLRQTLASFSFRVEEADSGRRALSLLARAAEE------ 706
Query: 82 GLKVDLIITDYCMPGMTGYE 101
G +L+I D+ MP G E
Sbjct: 707 GQPYELVILDWVMPEFDGLE 726
>gi|156743120|ref|YP_001433249.1| GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase
[Roseiflexus castenholzii DSM 13941]
gi|156234448|gb|ABU59231.1| adenylate/guanylate cyclase with GAF and PAS/PAC sensors
[Roseiflexus castenholzii DSM 13941]
Length = 971
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 54/167 (32%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
TE H+LAVDD R++++ LLT + +V+ +G AL +L L + D
Sbjct: 2 TELAHILAVDDDASVRRMLQILLTNAGYRVSVASTGEEALAYLEL-----------VTPD 50
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
L++ D +PG++G +++++K + P PF
Sbjct: 51 LVLMDVSLPGLSGQHVMERVK-SDPDR--------------------------PF----- 78
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
IPV++++ L+ GA+DF+VKPV L+++
Sbjct: 79 -----------IPVILITGYGDPEAKVAALDAGADDFLVKPVDLTEL 114
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|94270842|ref|ZP_01291836.1| PAS:Response regulator receiver [delta proteobacterium MLMS-1]
gi|93450644|gb|EAT01749.1| PAS:Response regulator receiver [delta proteobacterium MLMS-1]
Length = 650
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L V+D R+++E +L+ S KVT +G AL + EE+ GL+ DL+IT
Sbjct: 533 HILVVEDEASLRELLEAILSRSGYKVTLAANGGEALLLM---EEK------GLQPDLVIT 583
Query: 91 DYCMPGMTGYELLKKIKVTTP 111
D MPGM+G L ++++ P
Sbjct: 584 DVVMPGMSGSVLTERLRRKQP 604
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|390992972|ref|ZP_10263178.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372552287|emb|CCF70153.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 721
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KVT VD G EQ ++ D+ I
Sbjct: 458 LQILVADDHAANRMVLQRLLQKAGHKVTCVDGG-----------EQVLDTLADADFDVAI 506
Query: 90 TDYCMPGMTGYELLKKIKV 108
D MPG++G +LLK+++V
Sbjct: 507 VDLHMPGVSGLDLLKQLRV 525
>gi|440226990|ref|YP_007334081.1| two-component response regulator protein [Rhizobium tropici CIAT
899]
gi|440038501|gb|AGB71535.1| two-component response regulator protein [Rhizobium tropici CIAT
899]
Length = 279
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ ++G +AL+ L + + L++T
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAENGAKALEILKASSD----------IGLMVT 192
Query: 91 DYCMPGMTGYELLKKIKVTT 110
DY MP M G+EL ++I+ TT
Sbjct: 193 DYNMPDMDGFELTRRIRATT 212
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|373487561|ref|ZP_09578228.1| ATP-binding region ATPase domain protein [Holophaga foetida DSM
6591]
gi|372008636|gb|EHP09261.1| ATP-binding region ATPase domain protein [Holophaga foetida DSM
6591]
Length = 768
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 56/182 (30%)
Query: 14 SDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE 73
++ + G +L+ S+ + +L VDDS ++ +V +LTI+ +VT+ G +AL+ L +
Sbjct: 631 AESLQGLELALSN-QGRRILLVDDSAMNLEVFAEMLTITGHQVTSALDGFQALEIL---Q 686
Query: 74 EQSINGFDGLKVDLIITDYCMPGMTGYELLKKI-KVTTPFNFLYSTIIVFLNLQNLFLFI 132
++S DL++ D MP M G+E ++I K+ P
Sbjct: 687 QESF--------DLVLMDCQMPNMDGFESTRRIRKLDLP--------------------- 717
Query: 133 LSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 192
C P + N QD A RCL G DF+ KPV+ D
Sbjct: 718 ---CSQVPVIALTGNASQDDRA-------------------RCLGAGMNDFLTKPVRSKD 755
Query: 193 VK 194
++
Sbjct: 756 LQ 757
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|153870538|ref|ZP_01999919.1| sensory box sensor histidine kinase/response regulator [Beggiatoa
sp. PS]
gi|152072999|gb|EDN70084.1| sensory box sensor histidine kinase/response regulator [Beggiatoa
sp. PS]
Length = 980
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 54/178 (30%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P + VDD V+ +V+ LT+ + ++ +G AL + G
Sbjct: 718 PQQPGHFKIFVVDDEPVNIQVLINHLTLQNYAISIASNGLEALAQVE----------KGY 767
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
K D+I+ D MP MTGYE+ +K++ P N
Sbjct: 768 KPDIILLDVMMPKMTGYEVCRKLREVFPVN------------------------------ 797
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYL 200
E+P+V+++++N ++ + LE GA D++ KP+ K + R+K +L
Sbjct: 798 -------------ELPIVMLTAKNQVSDLVEGLESGANDYLTKPISKHELIARLKMHL 842
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|329908335|ref|ZP_08274848.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Oxalobacteraceae
bacterium IMCC9480]
gi|327546732|gb|EGF31677.1| Chemotaxis regulator - transmits chemoreceptor signals to
flagelllar motor components CheY [Oxalobacteraceae
bacterium IMCC9480]
Length = 152
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 29 EVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E++ L VDD R++I LL I K+ + G AL+ L QS G+ +D
Sbjct: 21 ELNFLVVDDFSTMRRIISGLLKEIGHSKIHEAEDGAAALRLL-----QSAQT-HGVPIDF 74
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFL 115
+ITD+ MP M G ELLK+I++ N L
Sbjct: 75 VITDWNMPVMDGLELLKRIRLDPALNHL 102
>gi|59714207|ref|YP_206982.1| two-component response regulator, sigma factor PP2C-like
phosphatase [Vibrio fischeri ES114]
gi|59482455|gb|AAW88094.1| two-component response regulator, sigma factor PP2C-like
phosphatase [Vibrio fischeri ES114]
Length = 505
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 17/100 (17%)
Query: 20 FDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING 79
++ SPS + H+L V+D + K+++ L S+ +TA +GR ALQFL +
Sbjct: 134 WERSPSH-KHPHILIVEDDAIQSKLLQAYLK-SNFSITATTNGREALQFLQHN------- 184
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIK----VTTPFNFL 115
VDLII+D MP M+G EL +++ + PF FL
Sbjct: 185 ----TVDLIISDIQMPEMSGLELRSQLEKENNFSIPFIFL 220
>gi|84685761|ref|ZP_01013657.1| response regulator [Maritimibacter alkaliphilus HTCC2654]
gi|84665854|gb|EAQ12328.1| response regulator [Rhodobacterales bacterium HTCC2654]
Length = 433
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 54/158 (34%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
VL VDDS R+V+ LT V +SG AL LG +DL+++
Sbjct: 22 QVLVVDDSRAQRRVLVATLTRLGFDVIEAESGEEALLILG-----------STHIDLVLS 70
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D+ MPGMTG EL ++ + + Y FIL
Sbjct: 71 DWMMPGMTGLELCRQFRKMPRDQYGY--------------FIL----------------- 99
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
++S+N + R L+ GA+DF+ KP+
Sbjct: 100 ------------LTSKNEKGAVARGLDIGADDFLTKPI 125
>gi|168019826|ref|XP_001762445.1| ETR3 ethylene receptor protein [Physcomitrella patens subsp.
patens]
gi|162686523|gb|EDQ72912.1| ETR3 ethylene receptor protein [Physcomitrella patens subsp.
patens]
gi|163644180|dbj|BAF95740.1| ethylene receptor homolog [Physcomitrella patens]
Length = 747
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
S +D V +L DD+ V+R V LL C+VT SGR LQ + +Q F
Sbjct: 608 SRTDFSGVRILVTDDNGVNRMVTRGLLMRLGCEVTLAASGRECLQLI----QQRNQAF-- 661
Query: 83 LKVDLIITDYCMPGMTGYELLKKIK 107
++++ D CMP M GYE+ +I+
Sbjct: 662 ---NVLLLDVCMPEMDGYEVATQIQ 683
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L D + + + LL S +VTAV + R + L + G ++DLI+
Sbjct: 21 VRILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSVLNTE---------GREIDLIL 71
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
+ +P G+++LK I +T
Sbjct: 72 AEVDLPKSKGFKMLKYITRST--------------------------------------- 92
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IP+V+MS+++ +A + +CL+ GA D++VKP++++++ + ++ R
Sbjct: 93 ----CLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMWR 141
>gi|260576146|ref|ZP_05844139.1| response regulator receiver modulated serine phosphatase
[Rhodobacter sp. SW2]
gi|259021626|gb|EEW24929.1| response regulator receiver modulated serine phosphatase
[Rhodobacter sp. SW2]
Length = 422
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS RK++ LL +VT SG A L L +E S D+I++
Sbjct: 22 HVLVVDDSKAQRKILSMLLLRWGYRVTEAGSGEEA---LALCQETSF--------DIILS 70
Query: 91 DYCMPGMTGYELLKKIK 107
D+ MPGMTG E + +
Sbjct: 71 DWMMPGMTGVEFCRSFR 87
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 52/167 (31%)
Query: 36 DDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMP 95
+D R V+ LL + +VT+V +G A GL EE + N DL++TD MP
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAW---GLLEEANSN------FDLVLTDVVMP 239
Query: 96 GMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSAL 155
++G +L K+ L+++ A
Sbjct: 240 CLSGVGILSKM-----------------------------------------LKRE--AC 256
Query: 156 REIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ +P+VIMSS + L + RCL GA D++VKPV+ +++K + ++ R
Sbjct: 257 KRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWR 303
>gi|427706828|ref|YP_007049205.1| multi-sensor hybrid histidine kinase [Nostoc sp. PCC 7107]
gi|427359333|gb|AFY42055.1| multi-sensor hybrid histidine kinase [Nostoc sp. PCC 7107]
Length = 902
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+H+L VDD K + +L KV+A+ SG +AL+FL K D+++
Sbjct: 780 LHILVVDDDLDTGKFLTVVLEQLGAKVSAIASGSQALEFLATS-----------KADILL 828
Query: 90 TDYCMPGMTGYELLKKIKVTTP 111
+D MPG+ GY L++ I+ P
Sbjct: 829 SDIGMPGIDGYMLMRLIRALPP 850
>gi|335036577|ref|ZP_08529902.1| two component response regulator [Agrobacterium sp. ATCC 31749]
gi|333791960|gb|EGL63332.1| two component response regulator [Agrobacterium sp. ATCC 31749]
Length = 430
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD+ R + +L + KV+ SG RAL+ L D + L+ITD
Sbjct: 126 VLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEILSQDP----------SIQLVITD 175
Query: 92 YCMPGMTGYELLKKIK 107
Y MP M GYEL ++I+
Sbjct: 176 YHMPDMDGYELTRRIR 191
>gi|226228075|ref|YP_002762181.1| putative two-component hybrid sensor and regulator [Gemmatimonas
aurantiaca T-27]
gi|226091266|dbj|BAH39711.1| putative two-component hybrid sensor and regulator [Gemmatimonas
aurantiaca T-27]
Length = 711
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 17 IDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS 76
I+G + + V VL VDD R + R+L + C+V A SG AL L D
Sbjct: 576 IEGTSTVGTRSGGVRVLLVDDDEHVRDAVSRILRHADCEVEAHPSGTSALNVLRTDPT-- 633
Query: 77 INGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ D++ITD+ MPGM+G EL + I+
Sbjct: 634 -------RYDVVITDFTMPGMSGLELAEAIQ 657
>gi|159184597|ref|NP_354083.2| two component response regulator [Agrobacterium fabrum str. C58]
gi|159139899|gb|AAK86868.2| two component response regulator [Agrobacterium fabrum str. C58]
Length = 430
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD+ R + +L + KV+ SG RAL+ L D + L+ITD
Sbjct: 126 VLVVDDARTARSGLVEILERQNFKVSEAHSGNRALEILSQDP----------SIQLVITD 175
Query: 92 YCMPGMTGYELLKKIK 107
Y MP M GYEL ++I+
Sbjct: 176 YHMPDMDGYELTRRIR 191
>gi|374629884|ref|ZP_09702269.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoplanus limicola DSM 2279]
gi|373907997|gb|EHQ36101.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoplanus limicola DSM 2279]
Length = 442
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 54/166 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+DS + + +L C+V + GR AL IN + K D+++
Sbjct: 13 IKILVVEDSRTQAEFLRYILEEEGCRVMLAEDGREALG--------EINSY---KPDIVL 61
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP + GYEL ++IK
Sbjct: 62 TDIVMPEIDGYELCRRIK------------------------------------------ 79
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR 195
++IPV++++ A + + LE GA++FI+KP + SD+++
Sbjct: 80 -SDDNTKDIPVILVTQLYDPADVIKGLESGADNFIIKPYEQSDIQK 124
>gi|23014142|ref|ZP_00053975.1| COG0784: FOG: CheY-like receiver [Magnetospirillum magnetotacticum
MS-1]
Length = 619
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
P E V VL VDD+ ++R ++E LL + +V AV+SG E+ + +
Sbjct: 238 PLGLEAVRVLVVDDNKMNRVLMETLLLRMGVGRVEAVESG-----------EKGLAAIER 286
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLN 124
K DL++ D MPGM G+E+ ++++ P L + L+
Sbjct: 287 EKPDLVLLDVMMPGMDGFEMCRRLRRIHPLTELPVIFVTALD 328
>gi|434400626|ref|YP_007134630.1| response regulator receiver sensor hybrid histidine kinase
[Stanieria cyanosphaera PCC 7437]
gi|428271723|gb|AFZ37664.1| response regulator receiver sensor hybrid histidine kinase
[Stanieria cyanosphaera PCC 7437]
Length = 731
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 11/76 (14%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V+D R++I R L +VTAV++GR+AL+ + L DLII+D
Sbjct: 600 VLVVEDDDNTREIIARQLIKEGWQVTAVENGRKALEAINLQTP-----------DLIISD 648
Query: 92 YCMPGMTGYELLKKIK 107
MP M G+EL+ +++
Sbjct: 649 LMMPEMDGFELIHELR 664
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A Q L E N +DL++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQN-----HIDLVLTE 133
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI IC
Sbjct: 134 VVMPRLSGIGLLSKI------------------------TSHKIC--------------- 154
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 155 ----KDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 201
>gi|297545222|ref|YP_003677524.1| metal dependent phosphohydrolase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842997|gb|ADH61513.1| metal dependent phosphohydrolase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 373
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD K I RL S V DSG AL+ L D KVD+I+ D
Sbjct: 5 LLFVDDEKQILKAIRRLYLDSDYCVYTADSGEEALKIL-----------DNTKVDVIVVD 53
Query: 92 YCMPGMTGYELLKKIKVTTP 111
MP M GYELLK++K P
Sbjct: 54 MKMPTMDGYELLKRVKQKYP 73
>gi|322421165|ref|YP_004200388.1| Fis family two component sigma54 specific transcriptional regulator
[Geobacter sp. M18]
gi|320127552|gb|ADW15112.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter sp. M18]
Length = 468
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+++L VDD V R+ + R+L + V A +G A++ L +Q + DLII
Sbjct: 1 MNILVVDDESVIREGLSRILEGDTYTVDAAKNGHAAIELL----QQK-------QFDLII 49
Query: 90 TDYCMPGMTGYELLKKIKVTTP 111
TD MPGM G+E+L +K+ P
Sbjct: 50 TDLKMPGMNGFEVLNAVKILQP 71
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A Q L E N +DL++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQN-----HIDLVLTE 133
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI IC
Sbjct: 134 VVMPRLSGIGLLSKI------------------------TSHKIC--------------- 154
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 155 ----KDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 201
>gi|417777752|ref|ZP_12425566.1| response regulator receiver domain protein [Leptospira weilii str.
2006001853]
gi|410782049|gb|EKR66614.1| response regulator receiver domain protein [Leptospira weilii str.
2006001853]
Length = 257
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 6 GVASLRLISDEIDGFDLSPSDTEEVH---VLAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
G+ L+L+ EI F + TE+ +L VDDS ++ ++ ++L + A G
Sbjct: 112 GIEELKLVIKEIIKFSYQKNSTEQRKFGKILIVDDSELNLLLLGKILERNGYSFQAFTEG 171
Query: 63 RRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
++A ++L QS G + I+TD+ MPG +G EL++ I+ F+ + T+I
Sbjct: 172 KKAYEYL-----QSF----GENISYILTDWIMPGFSGQELVEAIRKQEKFDKIPITVITG 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|409407499|ref|ZP_11255950.1| two component hybrid sensor histidine kinase/response regulator
protein [Herbaspirillum sp. GW103]
gi|386433250|gb|EIJ46076.1| two component hybrid sensor histidine kinase/response regulator
protein [Herbaspirillum sp. GW103]
Length = 1508
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 52/166 (31%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ E VH+L V+D+ V+R+V LL++ +T+ D+G + L D E+
Sbjct: 1147 ELEGVHILLVEDNAVNRQVASGLLSLCGAHITSADNGSTGVA-LASDPERHF-------- 1197
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DLI+ D MPG+ G E ++I+
Sbjct: 1198 DLILMDLQMPGIDGIEATRRIR-------------------------------------- 1219
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 191
+QD LR IP++ M++ RC++ G I KP+ +S
Sbjct: 1220 --RQQD---LRHIPILAMTANASPEDRRRCIDAGMAGHIAKPIDVS 1260
>gi|254459178|ref|ZP_05072600.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|373868639|ref|ZP_09605037.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|207084071|gb|EDZ61361.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|372470740|gb|EHP30944.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
Length = 639
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 53/156 (33%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDDS + R +I LL V + G+ AL L + + ++L+ITD
Sbjct: 127 ILVVDDSALFRLMISNLLRRHKFHVLEAEDGKIALNILNKNPD----------INLVITD 176
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
Y MP M G EL+K ++ +
Sbjct: 177 YEMPNMNGLELIKSVR-------------------------------------------N 193
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+ L++IP++++SS + + I C++ GA D++ KP
Sbjct: 194 NHKLKDIPMIVISSVDAQSTIVDCMKHGANDYLHKP 229
>gi|357472487|ref|XP_003606528.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355507583|gb|AES88725.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 830
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDD R V+ LL +V AV +G +A + L E+ G +DL++
Sbjct: 89 IKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVL---EDP------GNHIDLVL 139
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFL--YSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
T+ MP +TG LL KI + S L +FL IL I F+ + +
Sbjct: 140 TEIAMPFVTGIGLLCKIMSHKTLKNIPVISKCHSKPKLCTIFLCILIIAHLV--FWCTEH 197
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+E +MS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 198 IEM---------YAVMSCHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWR 243
>gi|451845529|gb|EMD58841.1| hypothetical protein COCSADRAFT_153475 [Cochliobolus sativus ND90Pr]
Length = 1234
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 45/191 (23%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
I D +D P T ++HVL V+D+ +++KV+ + LT + C D+G AL +
Sbjct: 1079 IHDNLDEQTNKP--TRQLHVLVVEDNHLNQKVLCKQLTKAGCITATADNGVHALNHIA-- 1134
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFI 132
+ DG+ + +++ D MP M G +KI+
Sbjct: 1135 -KTQFCTPDGIPLSMVLMDCEMPEMDGLTCCRKIR------------------------- 1168
Query: 133 LSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD 192
+EQ + +P++ +++ +ID G +D I KP ++ +
Sbjct: 1169 --------------EMEQRKQVVGHVPIIAVTANIRCGQIDEARASGMDDVIGKPFRIPE 1214
Query: 193 -VKRIKDYLTR 202
+++++ L R
Sbjct: 1215 LLEKMRGLLER 1225
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 61/191 (31%)
Query: 12 LISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGL 71
LI+ E+D F + + VLAVDD V KV+E LL VTA + AL+ L
Sbjct: 14 LIAREMDQFPVG------MRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITALKLLRE 67
Query: 72 DEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLF 131
+++ DL+I+D MP M G++LL+ +
Sbjct: 68 NKDM---------FDLVISDVHMPDMDGFKLLELV------------------------- 93
Query: 132 ILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 191
LE D +PV+++S + + + GA D+++KPV++
Sbjct: 94 ---------------GLEMD------LPVIMLSVNGETKTVLKGITHGACDYLLKPVRIE 132
Query: 192 DVKRIKDYLTR 202
+++ + ++ R
Sbjct: 133 ELRNVWQHVVR 143
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A Q L E N +DL++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQN-----HIDLVLTE 133
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI IC
Sbjct: 134 VVMPRLSGIGLLSKI------------------------TSHKIC--------------- 154
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 155 ----KDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 201
>gi|386718407|ref|YP_006184733.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia D457]
gi|384077969|emb|CCH12558.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia D457]
Length = 725
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 52/159 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + +V VD G L L E D +I
Sbjct: 460 MQILVADDHEANRMVLQRLLQKAGHRVLCVDGGEAVLDALADSE-----------FDAVI 508
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G ++LK+++V
Sbjct: 509 VDLHMPGMSGLDMLKELRVM---------------------------------------- 528
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
Q R PV+++S++ I RC + GA F+ KPV
Sbjct: 529 QAGGGPR-TPVLVLSADVTPEAIQRCTQAGAHAFLAKPV 566
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L V+ R V+ LL +VTAV +G A GL E+ + N DL++
Sbjct: 12 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAW---GLLEDANSN------FDLVL 62
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP ++G LL K+
Sbjct: 63 TDVVMPRLSGVGLLSKM------------------------------------------- 79
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
A R +P+VIMSS + L + RCL GA D++VKPV+ ++++ + ++ R
Sbjct: 80 MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVWR 132
>gi|333901293|ref|YP_004475166.1| chemotaxis protein CheW [Pseudomonas fulva 12-X]
gi|333116558|gb|AEF23072.1| response regulator receiver modulated CheW protein [Pseudomonas
fulva 12-X]
Length = 307
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 16/105 (15%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL------GLDEEQSINGFDGLK 84
HVL VDDS V RK + R L +VTA++ GR+AL +L G EQ +
Sbjct: 180 HVLIVDDSSVARKQVMRCLQTVGVEVTALNDGRQALDYLQAMVAEGKSPEQELL------ 233
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
++I+D MP M GY L I+ L+ I++ +L +F
Sbjct: 234 --MMISDIEMPEMDGYTLTAAIRADARMQKLH--ILLHTSLSGVF 274
>gi|39656325|gb|AAR29885.1| putative histidine kinase HHK6p [Cochliobolus heterostrophus]
Length = 1364
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 59/274 (21%), Positives = 114/274 (41%), Gaps = 66/274 (24%)
Query: 4 TNGVASLRLISDEI-DGF-DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDS 61
+NG ++ + I D F LS S+ + VHVL V+D+ +++++ + + V AV +
Sbjct: 1008 SNGTSAYPMFKSAIPDQFMSLSESERQNVHVLVVEDNHINQQIALKTIKKLQFSVNAVWN 1067
Query: 62 GRRALQFLGLDEEQSINGFDGL--KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTI 119
G+ AL++L + F L + D+I+ D MP GY I+ P+
Sbjct: 1068 GQEALEYLAKE-------FGPLHPRPDIILMDVQMPIRDGYSATHAIRTEAPW------- 1113
Query: 120 IVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDG 179
++ ++ +P+V M++ I ++C+ G
Sbjct: 1114 ------------------------------RNMPEVQGVPIVAMTASAIQGDKEKCVSCG 1143
Query: 180 AEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGRGINKRKARESCDLSSSPPSVITSSSSPS 239
+D++ KPVK ++++ V EGR ++ ARE + T+
Sbjct: 1144 MDDYLAKPVKGKILEKML------VKWALEGR---RKAARE---------TPCTNDKDRR 1185
Query: 240 SPSSPFRSPSILSSSAPCSPPSTLDSPTSRLKMT 273
S + P + +S P + +L+S T+ +T
Sbjct: 1186 SKTVPNPGNNFSASDHPRTAGMSLESETTAQALT 1219
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A Q L E N +DL++T+
Sbjct: 83 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL----EDLQN-----HIDLVLTE 133
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI IC
Sbjct: 134 VVMPRLSGIGLLSKITSH------------------------KIC--------------- 154
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 155 ----KDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 201
>gi|410613169|ref|ZP_11324237.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola psychrophila 170]
gi|410167311|dbj|GAC38126.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola psychrophila 170]
Length = 266
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRAL 66
ASL LI+ D DL D EV VL VDDS + R I R+L + K+ ++G +AL
Sbjct: 125 ASLDLINS--DELDLELFDVHEVRVLLVDDSKLARNHIRRVLNGLGLQKILEAENGAQAL 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYEL 102
L N FD L++TDY MP M G EL
Sbjct: 183 TVL------KENTFD-----LVVTDYNMPEMDGREL 207
>gi|94265875|ref|ZP_01289604.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93453570|gb|EAT03969.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 329
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L V+D R ++E +L+ S KVT +G AL + EE+ GL+ DL+IT
Sbjct: 212 HILVVEDEASLRGLLEAILSRSGYKVTLAANGGEALLLM---EEK------GLQPDLVIT 262
Query: 91 DYCMPGMTGYELLKKIKVTTP 111
D MPGM+G L ++++ P
Sbjct: 263 DVVMPGMSGSVLTERLRRKQP 283
>gi|333923713|ref|YP_004497293.1| multi-sensor hybrid histidine kinase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333749274|gb|AEF94381.1| multi-sensor hybrid histidine kinase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 1274
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 62/214 (28%)
Query: 9 SLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQF 68
SL + I G D + + +VL V+D+ ++++I+ LL + +VT ++G++AL+
Sbjct: 1032 SLLIKDRSISGSDAPDNKNKITNVLLVEDNQFNQRLIQHLLADNGYRVTLAENGQQALEM 1091
Query: 69 LGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNL 128
L QS D+++ D MP M GYE + I+ +
Sbjct: 1092 L----NQS-------NFDIVLMDMQMPVMDGYETTRVIRSDERY---------------- 1124
Query: 129 FLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+ +P++ +++ + ++CL G +D++ KPV
Sbjct: 1125 ---------------------------KSLPIIALTAHAMKGDNEKCLAAGCDDYLAKPV 1157
Query: 189 KLSD-VKRIKDYLTRDVNLGNEGRGINKRKARES 221
K +K IK Y+ G+ + K + R++
Sbjct: 1158 KRDILIKTIKKYI-------QPGQRVKKSRIRDT 1184
>gi|359453737|ref|ZP_09243042.1| response regulator [Pseudoalteromonas sp. BSi20495]
gi|414072166|ref|ZP_11408117.1| response regulator [Pseudoalteromonas sp. Bsw20308]
gi|358049171|dbj|GAA79291.1| response regulator [Pseudoalteromonas sp. BSi20495]
gi|410805383|gb|EKS11398.1| response regulator [Pseudoalteromonas sp. Bsw20308]
Length = 549
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 54/160 (33%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVL VDD ++R ++ ++L K++ +G AL+ L E Q I D+I+
Sbjct: 2 IHVLIVDDQALNRILLSKMLEEDGYKISMAYNGLEALKVL---ETQDI--------DIIL 50
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MP M G+E +KIK F+ +Y
Sbjct: 51 LDVIMPVMDGFEAAQKIK--QRFDEVY--------------------------------- 75
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
+P++ ++S + +RCLE G +DFI KP +
Sbjct: 76 --------LPIIFITSLDDQGSFERCLEVGGDDFIQKPFE 107
>gi|27377399|ref|NP_768928.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
USDA 110]
gi|27350543|dbj|BAC47553.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
USDA 110]
Length = 527
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 54/161 (33%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
TE +L VDD +R ++ R LT +V++V G++ALQ L DE D
Sbjct: 180 TETGSILVVDDIEANRDLLSRRLTRDGHRVSSVAGGQQALQALANDE-----------FD 228
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
L++ D MP + G ++L ++K
Sbjct: 229 LVLLDLMMPDINGLDVLVRMKA-------------------------------------- 250
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
LR IPV+++++ RC+E GAED++ KP
Sbjct: 251 -----DERLRRIPVIMITALAETESAVRCIEAGAEDYLPKP 286
>gi|330502729|ref|YP_004379598.1| putative CheW protein [Pseudomonas mendocina NK-01]
gi|328917015|gb|AEB57846.1| putative CheW protein [Pseudomonas mendocina NK-01]
Length = 310
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING-FDGLKVDLII 89
HVL VDDS V RK + R L +VTA++ GR AL +L ++ + G F ++ ++I
Sbjct: 180 HVLIVDDSSVARKQVSRCLQTVGVEVTALNDGREALNYL---KKMADEGRFPDKELLMLI 236
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
+D MP M GY L +I+ L+ I++ +L +F
Sbjct: 237 SDIEMPEMDGYTLTTEIRSDPRMQKLH--ILLHTSLSGVF 274
>gi|408791240|ref|ZP_11202850.1| stage II sporulation protein E [Leptospira meyeri serovar Hardjo
str. Went 5]
gi|408462650|gb|EKJ86375.1| stage II sporulation protein E [Leptospira meyeri serovar Hardjo
str. Went 5]
Length = 1048
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 54/177 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D E++ VL VDD ++R+V++ L + C V +G A++ + D
Sbjct: 672 DGEKIKVLVVDDEPINRQVLKNHLKLIGCDVHEASNGGDAIRMVR----------DDGPF 721
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
+L++ D MPGM+GY+ +C
Sbjct: 722 ELMLLDIMMPGMSGYD---------------------------------VCTVL------ 742
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYLT 201
++S +L ++P++ ++++N + I LE G D++ KP K V R K+ +T
Sbjct: 743 ----RESYSLYQLPILFLTAKNQITDIIASLEAGGNDYLAKPFDKRELVSRAKNLIT 795
>gi|398814805|ref|ZP_10573483.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
gi|398035893|gb|EJL29119.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
Length = 1042
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V+ +V+E +L +VT V SG+ AL L D + DL+I+D
Sbjct: 703 LLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAIL-----------DTKEWDLVISD 751
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M+GYEL + I+ +
Sbjct: 752 IMMPQMSGYELTRMIR-------------------------------------------E 768
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
L E+PV+++++ + I GA D++ KPV+ ++K + LT
Sbjct: 769 RFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEGMEIKSRIEALT 818
>gi|323701833|ref|ZP_08113503.1| multi-sensor hybrid histidine kinase [Desulfotomaculum nigrificans
DSM 574]
gi|323533137|gb|EGB23006.1| multi-sensor hybrid histidine kinase [Desulfotomaculum nigrificans
DSM 574]
Length = 1274
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 62/214 (28%)
Query: 9 SLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQF 68
SL + I G D + + +VL V+D+ ++++I+ LL + +VT ++G++AL+
Sbjct: 1032 SLLIKDRSISGSDAPDNKNKITNVLLVEDNQFNQRLIQHLLADNGYRVTLAENGQQALEM 1091
Query: 69 LGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNL 128
L QS D+++ D MP M GYE + I+ +
Sbjct: 1092 L----NQS-------NFDIVLMDMQMPVMDGYETTRVIRSDERY---------------- 1124
Query: 129 FLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+ +P++ +++ + ++CL G +D++ KPV
Sbjct: 1125 ---------------------------KSLPIIALTAHAMKGDNEKCLAAGCDDYLAKPV 1157
Query: 189 KLSD-VKRIKDYLTRDVNLGNEGRGINKRKARES 221
K +K IK Y+ G+ + K + R++
Sbjct: 1158 KRDILIKTIKKYI-------QPGQRVKKSRIRDT 1184
>gi|197337437|ref|YP_002158690.1| transcriptional regulator [Vibrio fischeri MJ11]
gi|197314689|gb|ACH64138.1| transcriptional regulator [Vibrio fischeri MJ11]
Length = 505
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 23/117 (19%)
Query: 3 TTNGVASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
TT +L L+ D I PS ++ H+L V+D + K+++ L S +TA +G
Sbjct: 123 TTTKNNTLSLLWDRI------PSQ-KQPHILIVEDDVIQSKILQAYLN-SDFSITAKPNG 174
Query: 63 RRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK----VTTPFNFL 115
R ALQFL + VDLII+D MP M+G EL +++ + PF FL
Sbjct: 175 REALQFLQHN-----------SVDLIISDIQMPEMSGLELRSQLEKENNFSIPFIFL 220
>gi|78047475|ref|YP_363650.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346724803|ref|YP_004851472.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv.
citrumelo F1]
gi|78035905|emb|CAJ23596.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346649550|gb|AEO42174.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 726
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ EQ ++ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVACVNGA-----------EQVLDAMAEEDFDAVI 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 511 VDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVL 543
>gi|302185533|ref|ZP_07262206.1| PAS [Pseudomonas syringae pv. syringae 642]
Length = 1187
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P DT +H+L VDD +R V+ L +VTAV+ G+ AL GFD
Sbjct: 938 APVDTRSLHLLVVDDMSANRLVLTGQLEFLGHQVTAVEDGKAALS------SWCEGGFDA 991
Query: 83 LKVDLIITDYCMPGMTGYELLKKIK 107
+ITD MPG++GY L + I+
Sbjct: 992 -----VITDCNMPGISGYALTQAIR 1011
>gi|404497776|ref|YP_006721882.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
gi|418066217|ref|ZP_12703583.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter metallireducens RCH3]
gi|78195375|gb|ABB33142.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
gi|373560892|gb|EHP87141.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter metallireducens RCH3]
Length = 470
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E + VL VDD V R+ + R+L V SG+ AL+ + +E++ + L
Sbjct: 2 ENIDVLVVDDEAVIREGLRRILEKEGFHVETSASGQIALERM---QEENFS--------L 50
Query: 88 IITDYCMPGMTGYELLKKIKVTTP 111
+ITD MPGM+G E+LK IKV P
Sbjct: 51 VITDLKMPGMSGMEVLKAIKVLQP 74
>gi|359447585|ref|ZP_09237176.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20439]
gi|358038576|dbj|GAA73425.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20439]
Length = 311
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 56/170 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD ++R ++E+ L+ ++ V SG AL F+ +VDLII D
Sbjct: 7 ILIVDDDALNRIILEKTLS-DEHEIYLVTSGEEALAFV-----------KHTQVDLIILD 54
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM GY++L ++K + S+ P F S N +
Sbjct: 55 IMMPGMNGYDVLVELKES------------------------SLSHAIPIIFISANSSHE 90
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
A + LE GA D+IVKP S VK R+++ L
Sbjct: 91 DEA-------------------KGLELGAMDYIVKPFCASIVKVRVRNQL 121
>gi|124003289|ref|ZP_01688139.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
gi|123991387|gb|EAY30818.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
Length = 1269
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 53/173 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+V +L VDD V+ +V+E L+I + +T G +AL+ + +E D+I
Sbjct: 884 QVKILVVDDEPVNLQVLENHLSIQNYNITQASDGLKALKIIKESKE---------PFDII 934
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+ D MP M+GYE+ + I+ P
Sbjct: 935 LLDVMMPKMSGYEVCRTIRERFP------------------------------------- 957
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYL 200
L E+PV++++++N I + GA D++ KP K+ + RIK ++
Sbjct: 958 ------LVELPVLMLTAKNQPKDIVEGFDAGANDYLTKPFSKVELLSRIKTHV 1004
>gi|119944738|ref|YP_942418.1| sensor histidine kinase [Psychromonas ingrahamii 37]
gi|119863342|gb|ABM02819.1| amino acid-binding domain sensor hybrid histidine kinase
[Psychromonas ingrahamii 37]
Length = 1574
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
L P +H L VDD+ V KVIE++L VT +SG +AL L N
Sbjct: 1064 LLPPALRGLHALVVDDNPVTLKVIEKMLIHLKFNVTTTESGEKALSVLE-------NALG 1116
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIK 107
VDL I D+ M G+ G E KKIK
Sbjct: 1117 NNTVDLAIIDWQMGGIDGIETAKKIK 1142
>gi|77361535|ref|YP_341110.1| two-component response regulator [Pseudoalteromonas haloplanktis
TAC125]
gi|76876446|emb|CAI87668.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis TAC125]
Length = 299
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 55/161 (34%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+++ VL VDD ++R V+E+ L+ +V V SG AL F+ + VD
Sbjct: 2 SKKAKVLIVDDDALNRIVLEKTLS-DEHEVFLVKSGDEALTFIKTTQ-----------VD 49
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LII D MPGM GYE+L K+K
Sbjct: 50 LIILDIVMPGMNGYEVLVKLK--------------------------------------- 70
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+ SA + IPV+ +S+ + + LE GA D+I KP
Sbjct: 71 ----EDSATQMIPVIFISANSSHDDESKGLELGAMDYITKP 107
>gi|344207296|ref|YP_004792437.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
JV3]
gi|343778658|gb|AEM51211.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
JV3]
Length = 724
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 52/159 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + +V VD G L L E D +I
Sbjct: 460 MQILVADDHEANRMVLQRLLQKAGHRVLCVDGGEAVLDALADSE-----------FDAVI 508
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MPGM+G ++LK+++V
Sbjct: 509 VDLHMPGMSGLDMLKELRVM---------------------------------------- 528
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
Q R PV+++S++ I RC + GA F+ KPV
Sbjct: 529 QAGGGPR-TPVLVLSADVTPEAIQRCTQAGAHAFLAKPV 566
>gi|390949064|ref|YP_006412823.1| signal transduction histidine kinase [Thiocystis violascens DSM
198]
gi|390425633|gb|AFL72698.1| signal transduction histidine kinase [Thiocystis violascens DSM
198]
Length = 907
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 51/165 (30%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P D + VL VDD+ +R+V+ +L+ ++T GR ALQ L E + F
Sbjct: 618 PQDLRDKRVLLVDDNATNRRVLGKLVVQWEMRLTEAADGREALQVL---EANASTPF--- 671
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
D+++ DY MP M G+EL +K
Sbjct: 672 --DVLLIDYHMPRMDGFELAAALK------------------------------------ 693
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
QD+ R++ ++++SS ++ RC E G + F+ KPV
Sbjct: 694 ------QDAR-FRDLKLIMLSSASVRGLGMRCRELGIDAFLTKPV 731
>gi|429333886|ref|ZP_19214569.1| two-component hybrid sensor and regulator [Pseudomonas putida CSV86]
gi|428761409|gb|EKX83640.1| two-component hybrid sensor and regulator [Pseudomonas putida CSV86]
Length = 1373
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 20 FDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING 79
DL+P D + VL VDDS ++++ L+ + +VT +G AL+ L
Sbjct: 1243 LDLTPGDFSGLKVLIVDDSEDILEIMKALMELEGAEVTLASNGLEALERL---------- 1292
Query: 80 FDGLKV-DLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
DG V DL+++D MP M G EL+ +I+ + FN L
Sbjct: 1293 -DGDSVFDLVLSDLGMPVMNGLELIGRIRADSRFNAL 1328
>gi|346308400|ref|ZP_08850517.1| hypothetical protein HMPREF9457_02226 [Dorea formicigenerans
4_6_53AFAA]
gi|345903120|gb|EGX72889.1| hypothetical protein HMPREF9457_02226 [Dorea formicigenerans
4_6_53AFAA]
Length = 853
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
S+ E +HVL V+D+ ++ ++ LL S +VTA +G+ AL EQ I
Sbjct: 724 SNVEGMHVLLVEDNELNLEIARYLLEESGVQVTAAKNGQEALDIFEQSGEQEI------- 776
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTT 110
DLI+ D MP M G E ++I+ T
Sbjct: 777 -DLILMDIMMPVMDGLEATRRIRTCT 801
>gi|338214468|ref|YP_004658529.1| multi-sensor hybrid histidine kinase [Runella slithyformis DSM 19594]
gi|336308295|gb|AEI51397.1| multi-sensor hybrid histidine kinase [Runella slithyformis DSM 19594]
Length = 1205
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD+FV+RKV +L S C V DSG++A+Q +DE I G D I D
Sbjct: 943 LLLVDDNFVNRKVASEILKKSGCVVDTADSGKQAIQL--VDE---IFSSSGPYYDAIFMD 997
Query: 92 YCMPGMTGYELLKKIK 107
MP M G E ++++
Sbjct: 998 IQMPDMDGIETTQRLR 1013
>gi|325925186|ref|ZP_08186599.1| Signal transduction histidine kinase [Xanthomonas perforans 91-118]
gi|325544440|gb|EGD15810.1| Signal transduction histidine kinase [Xanthomonas perforans 91-118]
Length = 719
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ EQ ++ D +I
Sbjct: 455 MRMLVADDHEANRMVLQRLLEKAGHKVACVNGA-----------EQVLDAMAEEDFDAVI 503
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 504 VDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVL 536
>gi|406860380|gb|EKD13439.1| hsp90-like protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1001
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 43/175 (24%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG---LDEEQSINGFDGLKV 85
+ H+L V+D+ V++KV+ + L + C V + G AL FL L + S +G G+ +
Sbjct: 856 KYHILLVEDNLVNQKVLSKQLRNAGCVVHIANHGVEALDFLARTSLWTDCSKSGI-GIIL 914
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
L++ D MP M G + ++I+
Sbjct: 915 TLVLMDLEMPVMDGLQCTRRIR-------------------------------------- 936
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYL 200
+LE++ +P++ +S+ + ++D ++ G +D + KP ++ ++ + D L
Sbjct: 937 -DLEREGKVDGHVPIIAVSANTRVEQLDMAIQAGMDDVVAKPFQIPELMQKMDRL 990
>gi|392554223|ref|ZP_10301360.1| signal transduction histidine kinase two-component system with
Protein-glutamate methylesterase domain
[Pseudoalteromonas undina NCIMB 2128]
Length = 918
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 52/163 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L V+D+ ++R+VI ++L + V + G +AL L +EQS DLI+
Sbjct: 799 HILLVEDNAINRQVISKMLEPTKAVVVMAEDGIKALDVL---KEQSF--------DLILM 847
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D MP M GYE + I+V + L+ +
Sbjct: 848 DCQMPNMDGYECTRTIRV--------------MELKTGW--------------------- 872
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
+P+V +++ RCL G +DFI KP+ D+
Sbjct: 873 ------RVPIVAITANAYEEDKQRCLIAGMDDFIAKPINSDDL 909
>gi|149374964|ref|ZP_01892737.1| Chemotaxis signal transduction protein [Marinobacter algicola
DG893]
gi|149360853|gb|EDM49304.1| Chemotaxis signal transduction protein [Marinobacter algicola
DG893]
Length = 310
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL-KVDLIIT 90
VL VDDS V R+ IER LT +V + GR+AL +L +E + +G + + LII+
Sbjct: 183 VLVVDDSAVARRQIERCLTAIGMEVVTKNDGRQALDYL---KEVTADGSRAVDHLCLIIS 239
Query: 91 DYCMPGMTGYELLKKIK 107
D MP M GY L+ K K
Sbjct: 240 DVEMPEMDGYTLVTKCK 256
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 52/147 (35%)
Query: 56 VTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
V + +G++A +L E++ N +DL++T+ MPG++G LL +I
Sbjct: 37 VISAKNGQQAWAYL---EDKGNN------IDLVLTEVFMPGVSGISLLSRIM-------- 79
Query: 116 YSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRC 175
N+F + IPV++MSS + ++ + +C
Sbjct: 80 ---------RHNIF--------------------------KNIPVIMMSSSDDMSTVFKC 104
Query: 176 LEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L GA DF+VKP++ +++K + ++ R
Sbjct: 105 LSKGAVDFLVKPIRKNELKNLWQHVWR 131
>gi|254491422|ref|ZP_05104601.1| CheW-like domain protein [Methylophaga thiooxidans DMS010]
gi|224462900|gb|EEF79170.1| CheW-like domain protein [Methylophaga thiooxydans DMS010]
Length = 306
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 21 DLSPSDTE-EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING 79
DL+ +T+ H+L DDS V RK I+R L T +G+ AL+ L EQ +
Sbjct: 170 DLAEKNTQARKHILVADDSSVARKQIKRTLVQIGLDATIAKNGKEALEILKGWAEQGLTV 229
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ V L+I+D MP M GY L +I+
Sbjct: 230 SE--HVSLLISDIEMPEMDGYTLTSEIR 255
>gi|242277862|ref|YP_002989991.1| Fis family transcriptional regulator [Desulfovibrio salexigens DSM
2638]
gi|242120756|gb|ACS78452.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio salexigens DSM 2638]
Length = 447
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
++L V+D + R + ++T + V AV SG ALQ +G E +L+
Sbjct: 4 HANILIVEDEAIARDNLTHVMTEAGHMVVAVSSGTEALQKIGKQE-----------FELV 52
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF--PSN 146
+TD +PGM G ELL+ IK P + +IV ++ ++++ + P N
Sbjct: 53 LTDLMLPGMNGIELLEHIKEIQP----STQVIVITGHASVDTAVIAMQKGAHSYIAKPLN 108
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDF 183
E + + +S E + R+ + LE+G +DF
Sbjct: 109 LDELRAQVFNALERQALSVE--VLRLRQVLEEGKQDF 143
>gi|261410004|ref|YP_003246245.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261286467|gb|ACX68438.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1045
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L +DD V+ +V+E +L +VT SG+ AL L D + DL+I+D
Sbjct: 722 LLIIDDDPVNLQVLEAILPPDEYEVTMATSGKEALAVL-----------DAKEWDLVISD 770
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M+GYEL ++I+ +
Sbjct: 771 IMMPQMSGYELTRRIR-------------------------------------------E 787
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
L E+PV+++++ + I GA D++ KPV+ +++ + LT
Sbjct: 788 RFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEALEIRSRIEALT 837
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL + R +I LL +V A G +A L +E+S N +DL++
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDIL---KEKSFN------IDLVL 93
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P M+G+ LL I +E
Sbjct: 94 TEVELPLMSGFLLLSTI-----------------------------------------ME 112
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
D A + IPV++MSS + ++ + +C+ GA DF+VKP++ ++++ + ++ R
Sbjct: 113 HD--ACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 163
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL + R +I LL +V A G +A L +E+S N +DL++
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDIL---KEKSFN------IDLVL 93
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ +P M+G+ L STI +E
Sbjct: 94 TEVELPLMSGF-------------LLLSTI----------------------------ME 112
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
D A + IPV++MSS + ++ + +C+ GA DF+VKP++ ++++ + ++ R
Sbjct: 113 HD--ACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWR 163
>gi|389683444|ref|ZP_10174776.1| sensory box histidine kinase/response regulator [Pseudomonas
chlororaphis O6]
gi|388552957|gb|EIM16218.1| sensory box histidine kinase/response regulator [Pseudomonas
chlororaphis O6]
Length = 1191
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 17 IDGFDLSPSDTEE------VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG 70
++ F SP T E + VL VDD +R V+ + L KV A+DS AL
Sbjct: 938 VEAFSQSPQVTSERPQSRRMSVLVVDDVRANRMVLSQQLMFLGHKVVALDSAEAALA--- 994
Query: 71 LDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ G DL++TD MPGM+GY+L + I+
Sbjct: 995 --------RWQGEAFDLVMTDCHMPGMSGYQLSEAIR 1023
>gi|359438460|ref|ZP_09228480.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20311]
gi|358026875|dbj|GAA64729.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20311]
Length = 311
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 56/170 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD ++R ++E+ L+ ++ V SG AL F+ +VDLII D
Sbjct: 7 ILIVDDDALNRIILEKTLS-DEHEIYLVTSGEEALAFV-----------KHTQVDLIILD 54
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM GY++L ++K + S+ P F S N +
Sbjct: 55 IMMPGMNGYDVLVELKES------------------------SLSHAIPIIFISANSSHE 90
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
A + LE GA D+IVKP S VK R+++ L
Sbjct: 91 DEA-------------------KGLELGAMDYIVKPFCASIVKVRVRNQL 121
>gi|255039493|ref|YP_003090114.1| multi-sensor hybrid histidine kinase [Dyadobacter fermentans DSM
18053]
gi|254952249|gb|ACT96949.1| multi-sensor hybrid histidine kinase [Dyadobacter fermentans DSM
18053]
Length = 1204
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 57/199 (28%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD+ V+RKV +L S C+ +SG +A++ + G+ D+I D
Sbjct: 947 ILLVDDNAVNRKVANEILKKSGCETDMAESGFKAIEMVEKRYHSDAKGY-----DIIFMD 1001
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M G E +++K ++
Sbjct: 1002 IQMPDMDGVETTQELK-----------------------------------------KRF 1020
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYLTRDVNLGN-E 209
S L P+V M++ ++ DR + G +D+I KP++ V+++KD +GN E
Sbjct: 1021 SKGLP--PIVAMTAYSMKEDRDRFMSQGMDDYIAKPIRAQTLVQKVKDL------MGNIE 1072
Query: 210 GRGINKRKARESCDLSSSP 228
GR + ++K +E + SP
Sbjct: 1073 GRKL-EQKQKEIAQEAMSP 1090
>gi|427738852|ref|YP_007058396.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
gi|427373893|gb|AFY57849.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
Length = 1048
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 54/188 (28%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
S + ++L VDD V+ +V+ L++ +VT SG AL+ + +G K
Sbjct: 729 SKNSKYNILIVDDEPVNLQVLNNHLSLQKYRVTQASSGAEALEIIE----------NGDK 778
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
VDL++ D MP M+GY++ K++
Sbjct: 779 VDLMLLDIMMPKMSGYKVCAKLR------------------------------------- 801
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYLTRD 203
+ A ++PVV+++++N + I + GA D++ KP + + RIK +L
Sbjct: 802 ------EKYAPHQLPVVMLTAKNQVTNIVTGFKFGANDYLTKPFHKDELLTRIKSHLKLS 855
Query: 204 VNLGNEGR 211
+ GR
Sbjct: 856 QTSKSYGR 863
>gi|392410312|ref|YP_006446919.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
gi|390623448|gb|AFM24655.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
Length = 1147
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 23 SPSDT---EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING 79
+P+D E + VL VDD+ +R+++E L K T VD G AL + E+
Sbjct: 740 APADVSALENLPVLVVDDNATNRRILENTLLQWQTKPTIVDGGEAALHAMKSAHEE---- 795
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKI 106
G L+ITD MP M G+EL+++I
Sbjct: 796 --GRPFKLVITDCMMPEMDGFELVRRI 820
>gi|398977249|ref|ZP_10687006.1| signal transduction histidine kinase [Pseudomonas sp. GM25]
gi|398138491|gb|EJM27512.1| signal transduction histidine kinase [Pseudomonas sp. GM25]
Length = 1071
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+HVL +D+ +++ +++ L C+VT +G +ALQ D+ D++
Sbjct: 842 ELHVLVAEDNLINQAILKEQLESLGCEVTVTGNGLQALQVWNQDD-----------FDVV 890
Query: 89 ITDYCMPGMTGYELLKKIKVT 109
++D MP M GYEL ++I+ T
Sbjct: 891 LSDVNMPVMNGYELTRQIRQT 911
>gi|329924374|ref|ZP_08279491.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328940725|gb|EGG37042.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1021
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V+ +V+E +L +VT SG+ AL L D DL+I+D
Sbjct: 698 LLIVDDDPVNLQVLEAILPPDEYEVTMATSGKEALAVL-----------DAKAWDLVISD 746
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M+GYEL ++I+ +
Sbjct: 747 IMMPQMSGYELTRRIR-------------------------------------------E 763
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
L E+PV+++++ + I GA D++ KPV+ +++ + LT
Sbjct: 764 RFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEALEIRSRIEALT 813
>gi|332535746|ref|ZP_08411492.1| response regulator [Pseudoalteromonas haloplanktis ANT/505]
gi|332034854|gb|EGI71386.1| response regulator [Pseudoalteromonas haloplanktis ANT/505]
Length = 549
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 54/158 (34%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVL VDD ++R ++ ++L K++ +G AL L ++ +D+++
Sbjct: 2 IHVLIVDDQALNRILLSKMLEQEGYKISVAYNGLDALNVLKREQ-----------IDIVL 50
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MP M G+E +KIK YS +
Sbjct: 51 LDVLMPVMDGFEAAEKIKQQ------YSEVY----------------------------- 75
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+P++ ++S + A +RCLE G +DFI KP
Sbjct: 76 --------LPIIFITSLDDQASFERCLEVGGDDFIHKP 105
>gi|420242507|ref|ZP_14746545.1| PAS domain S-box [Rhizobium sp. CF080]
gi|398067331|gb|EJL58853.1| PAS domain S-box [Rhizobium sp. CF080]
Length = 1251
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 60/247 (24%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P +T +L VDD+ V+R+++ LT+ A DSG L L E I G+
Sbjct: 932 PINTSGARILVVDDNPVNRRILTEQLTMWGFDTVAADSGAEGLAI--LSEAARI----GV 985
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
VD I+ DY MP M G + K ++ F+ T +VFL
Sbjct: 986 FVDAIVLDYHMPEMNGLDFAKHLRRDARFD---GTGVVFLT------------------- 1023
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRD 203
S ++ D S + +S NI A ++KP + + ++ + R
Sbjct: 1024 -SMDMAGDDS--------MFASLNIQAH------------LMKPARANLLRSTIIDVVRS 1062
Query: 204 VNLGNEGRGINKRKARESCDLSSSP-PSVITSSSSPSSPSSPFRSPSILSS--SAPCSPP 260
+ KR+A E+ ++ P P + + +P + ++ RS +++ +AP S P
Sbjct: 1063 IR--------TKRRAVEAEQAATRPQPRPVVQAVAPVALAAQPRSTPVITEEPAAPVSTP 1114
Query: 261 STLDSPT 267
+PT
Sbjct: 1115 PMQAAPT 1121
>gi|423688279|ref|ZP_17663082.1| transcriptional regulator [Vibrio fischeri SR5]
gi|371492782|gb|EHN68388.1| transcriptional regulator [Vibrio fischeri SR5]
Length = 505
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 20 FDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING 79
+D PS ++ H+L V+D + K+++ L S +TA +GR ALQFL +
Sbjct: 134 WDRIPSQ-KQPHILIVEDDVIQSKILQAYLN-SDFSITAKPNGREALQFLQHN------- 184
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIK----VTTPFNFL 115
VDLII+D MP M+G EL +++ + PF FL
Sbjct: 185 ----SVDLIISDIQMPEMSGLELRSQLEKENNFSIPFIFL 220
>gi|298528407|ref|ZP_07015811.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512059|gb|EFI35961.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 127
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
S + + +L VDD R++I+ +L + + D G A + L D
Sbjct: 2 SSNKNIRILVVDDFSTMRRIIKNILRQLGYNNIVEADDGTTAWEILNKD----------- 50
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPF 112
K+D I++D+ MP MTG ELL+K++ + F
Sbjct: 51 KIDFIVSDWNMPKMTGIELLRKVRSSEEF 79
>gi|356553458|ref|XP_003545073.1| PREDICTED: histidine kinase 2-like [Glycine max]
Length = 1225
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L VDD+ V+R+V + +L KVTAV+SGR AL+ L L + FD +DL
Sbjct: 1084 QILVVDDNAVNRRVAKGVLQKYGAKVTAVESGRAALKMLKLP-----HNFDACFMDL--- 1135
Query: 91 DYCMPGMTGYELLKKIK-VTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
MP M G+E ++I+ + + N I +F
Sbjct: 1136 --QMPEMDGFEATRQIRCLESEVN---EKIACGQASAEMF-------------------- 1170
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
S + IP++ M++++ + + C++ G +D++ KP
Sbjct: 1171 -GSISYWHIPILAMTADSTQSSNEECIKCGMDDYVSKP 1207
>gi|372490073|ref|YP_005029638.1| Response regulator receiver domain protein,histidine kinase
[Dechlorosoma suillum PS]
gi|359356626|gb|AEV27797.1| Response regulator receiver domain protein,histidine kinase
[Dechlorosoma suillum PS]
Length = 389
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 55/171 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L DDS +DR + +LL V AV G Q++ DGL+ DL++ D
Sbjct: 13 ILLADDSALDRHLFTQLLQRYGHTVHAVADG-----------AQALAALDGLQPDLVLLD 61
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M+G EL K+K
Sbjct: 62 IRMPDMSGLELCAKLKA------------------------------------------- 78
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLT 201
A R+IPV+ +S+ + + + G D+I KP+K +V+ R+ +LT
Sbjct: 79 DPATRDIPVIFISAASAVEDRIQAFSSGGVDYIGKPIKSEEVQARVTTHLT 129
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V++ R ++ LL S +V V +G +A + L + +N +D+++
Sbjct: 84 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVL-----EDLNNH----IDIVL 134
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI LN +
Sbjct: 135 TEVVMPYLSGISLLCKI----------------LNHK----------------------- 155
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ R IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 156 ----SRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWR 204
>gi|152987767|ref|YP_001348377.1| RcsC [Pseudomonas aeruginosa PA7]
gi|150962925|gb|ABR84950.1| RcsC [Pseudomonas aeruginosa PA7]
Length = 1083
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+ VL +D+ V++ ++ L C V+ GR+ALQ FD + DL+
Sbjct: 848 ELRVLVAEDNPVNQALLREQLEELGCHVSLASDGRQALQL-----------FDHQRFDLL 896
Query: 89 ITDYCMPGMTGYELLKKIK 107
++D MP MTGYEL + ++
Sbjct: 897 LSDVNMPNMTGYELTQALR 915
>gi|89094260|ref|ZP_01167202.1| chemotaxis protein CheY/response regulator receiver domain protein
[Neptuniibacter caesariensis]
gi|89081515|gb|EAR60745.1| chemotaxis protein CheY/response regulator receiver domain protein
[Neptuniibacter caesariensis]
Length = 264
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRAL 66
++L L+S+ D DL D + VL VDDS + R VI ++L + +T G A+
Sbjct: 125 STLDLLSN--DELDLEYYDPASLRVLVVDDSRMARNVIIKVLGNLGITHITQAVDGSEAM 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
Q L NGFD L++TDY MP + G +L + I+ + ++ L
Sbjct: 183 QLLP-------NGFD-----LVVTDYNMPEVNGLQLAEYIRSSIDYSHL 219
>gi|359437210|ref|ZP_09227280.1| signal transduction histidine kinase two-component system with
Protein-glutamate methylesterase domain
[Pseudoalteromonas sp. BSi20311]
gi|359446653|ref|ZP_09236304.1| hypothetical protein P20439_2642 [Pseudoalteromonas sp. BSi20439]
gi|358028034|dbj|GAA63529.1| signal transduction histidine kinase two-component system with
Protein-glutamate methylesterase domain
[Pseudoalteromonas sp. BSi20311]
gi|358039459|dbj|GAA72553.1| hypothetical protein P20439_2642 [Pseudoalteromonas sp. BSi20439]
Length = 918
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 52/163 (31%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L V+D+ ++R+VI ++L + V + G +AL L +EQS DLI+
Sbjct: 799 HILLVEDNAINRQVISKMLEPTKAVVVMAEDGIKALDVL---KEQSF--------DLILM 847
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D MP M GYE + I+V + L+ +
Sbjct: 848 DCQMPNMDGYECTRTIRV--------------MELKTGW--------------------- 872
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
+P+V +++ RCL G +DFI KP+ D+
Sbjct: 873 ------RVPIVAITANAYEEDKQRCLIAGMDDFIAKPINSDDL 909
>gi|119484778|ref|ZP_01619260.1| two-component response regulator [Lyngbya sp. PCC 8106]
gi|119457596|gb|EAW38720.1| two-component response regulator [Lyngbya sp. PCC 8106]
Length = 215
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD F R I L IS V + ++G+ AL+ + D K LI+TD
Sbjct: 5 ILVVDDDFGTRLSISDYLEISGYTVISAENGQEALELV-----------DKHKPHLIVTD 53
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
MP M GY+L+K+I+ F L
Sbjct: 54 ITMPEMDGYDLVKRIRSRPAFRLL 77
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R ++ LL S +VTAV A + L ++E+S +DL++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRIL--EDEKSC-------IDLVLTE 116
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP +G LL KI
Sbjct: 117 VDMPVHSGTGLLSKI-------------------------------------------MS 133
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL +GA DF+VKP++ +++K + ++ R
Sbjct: 134 HKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWR 184
>gi|289579017|ref|YP_003477644.1| metal dependent phosphohydrolase [Thermoanaerobacter italicus Ab9]
gi|289528730|gb|ADD03082.1| metal dependent phosphohydrolase [Thermoanaerobacter italicus Ab9]
Length = 373
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD K I RL S V DSG AL+ L D KVD+I+ D
Sbjct: 5 LLFVDDEKQILKAIRRLYLDSDYCVYTADSGDEALKIL-----------DNTKVDVIVVD 53
Query: 92 YCMPGMTGYELLKKIKVTTP 111
MP M GYELLK++K P
Sbjct: 54 MKMPTMDGYELLKRVKQKHP 73
>gi|39995705|ref|NP_951656.1| sigma-54-dependent transcriptional response regulator [Geobacter
sulfurreducens PCA]
gi|409911152|ref|YP_006889617.1| sigma-54-dependent transcriptional response regulator [Geobacter
sulfurreducens KN400]
gi|39982469|gb|AAR33929.1| sigma-54-dependent transcriptional response regulator [Geobacter
sulfurreducens PCA]
gi|298504717|gb|ADI83440.1| sigma-54-dependent transcriptional response regulator [Geobacter
sulfurreducens KN400]
gi|406893320|gb|EKD38414.1| hypothetical protein ACD_75C00742G0004 [uncultured bacterium]
Length = 470
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E + VL VDD + R+ + R+L V SG+ AL+ L DE L
Sbjct: 2 ENIDVLVVDDEAIIREGLRRILEKEGYHVETSASGQIALERLQ-DENYG----------L 50
Query: 88 IITDYCMPGMTGYELLKKIKVTTP 111
+ITD MPGM+G E+LK IKV P
Sbjct: 51 VITDLKMPGMSGMEVLKAIKVLQP 74
>gi|119477958|ref|ZP_01618058.1| chemotaxis protein CheV [marine gamma proteobacterium HTCC2143]
gi|119448871|gb|EAW30113.1| chemotaxis protein CheV [marine gamma proteobacterium HTCC2143]
Length = 179
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+H+L VDDS V I+R + K TA++ GR+AL +L + ++S+N + +I
Sbjct: 47 MHLLIVDDSAVAYNQIKRCVEGIGVKTTALNDGRQALSYLQVLADESVNVANEFLA--VI 104
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLY 116
+D MP M GY L I+ LY
Sbjct: 105 SDIAMPEMDGYTLTAAIRADPRLADLY 131
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V++ R ++ LL S +V V +G +A + L + +N +D+++
Sbjct: 95 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVL-----EDLNNH----IDIVL 145
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI LN +
Sbjct: 146 TEVVMPYLSGVGLLCKI----------------LNHK----------------------- 166
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ R IPV++MSS + + I +CL GA DF+VKP++ +++K + ++ R
Sbjct: 167 ----SRRNIPVIMMSSHDSMGLIFKCLSKGAVDFLVKPIRKNELKILWQHVWR 215
>gi|392537227|ref|ZP_10284364.1| response regulator [Pseudoalteromonas marina mano4]
Length = 668
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD + + R+L + KV+ +SG AL++L + V +I+TD
Sbjct: 5 ILLVDDEVNVLRSLRRVLQRAGFKVSVAESGPEALEYLKTSD-----------VSIIVTD 53
Query: 92 YCMPGMTGYELLKKIKVTTP 111
Y MP MTG +LL+++K+ P
Sbjct: 54 YRMPNMTGADLLREVKIHWP 73
>gi|330921689|ref|XP_003299527.1| hypothetical protein PTT_10535 [Pyrenophora teres f. teres 0-1]
gi|311326752|gb|EFQ92366.1| hypothetical protein PTT_10535 [Pyrenophora teres f. teres 0-1]
Length = 1358
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 44/188 (23%)
Query: 4 TNGVASLRLISDEIDG--FDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDS 61
+NG ++ +I I LS S+ ++VH+L V+D+ +++++ + + V AV +
Sbjct: 1008 SNGNSAYPMIKPTIPDHLISLSESERQQVHILVVEDNHINQQIALKTIKKLHFSVNAVWN 1067
Query: 62 GRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIV 121
G+ AL++L + S + D+I+ D MP GY I+ P+
Sbjct: 1068 GQEALEYLTQEFSPS-----HPRPDIILMDVQMPIRDGYSATHAIRTEAPW--------- 1113
Query: 122 FLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAE 181
++ ++ +P+V M++ I ++C+ G +
Sbjct: 1114 ----------------------------RNMPEIQGVPIVAMTASAIQGDKEKCVSCGMD 1145
Query: 182 DFIVKPVK 189
D++ KPVK
Sbjct: 1146 DYLAKPVK 1153
>gi|403382341|ref|ZP_10924398.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
JC66]
Length = 1041
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 54/163 (33%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD + KV+ +L V AV SG+ AL + + KVDL+I D
Sbjct: 713 ILVVDDEPANLKVLIIMLQSLHYSVIAVGSGQEALDVITTE-----------KVDLLILD 761
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP MTGYE+ K ++ QD
Sbjct: 762 LMMPHMTGYEVCKTVR------------------------------------------QD 779
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
L E+PV+I+++ L+ + + GA D++ KPV L +++
Sbjct: 780 YD-LVELPVIILTASGQLSDLVASFQFGANDYLQKPVNLKELE 821
>gi|302037442|ref|YP_003797764.1| putative histidine kinase [Candidatus Nitrospira defluvii]
gi|300605506|emb|CBK41839.1| putative Histidine kinase with protein phosphatase region
[Candidatus Nitrospira defluvii]
Length = 563
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 62/203 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L DD+ V+R+++E LL V + G++A+ ++EQ DL+I D
Sbjct: 3 ILVADDTIVNRRILEALLGKDGHTVVLAEDGKQAVALF--EQEQP---------DLVIMD 51
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M GY+ K IK T F+ P F
Sbjct: 52 LMMPEMDGYQATKLIKQQTGSRFV------------------------PVIF-------- 79
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP-------VKLSDVKRIKDYLTRDV 204
+ +++E++LA +C+ G +DF+ KP K++ +RI++
Sbjct: 80 --------LTAVTNEDVLA---KCIAHGGDDFLTKPYNHTILRAKIAAWERIQNLHATVT 128
Query: 205 NLGNEGRGINKRKARESCDLSSS 227
+E G + R E D++S+
Sbjct: 129 AQKDELEGHHARFLHEQ-DVAST 150
>gi|422665038|ref|ZP_16724911.1| PAS protein, partial [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330975457|gb|EGH75523.1| PAS protein [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 290
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
DT +H+L VDD +R V+ R L +VTAV+ G+ AL + +G+
Sbjct: 44 DTRSLHLLVVDDMSANRLVLTRQLEFLGHQVTAVEDGKAALS----------SWCEGV-F 92
Query: 86 DLIITDYCMPGMTGYELLKKIK 107
D +ITD MPG++GY L + I+
Sbjct: 93 DAVITDCNMPGISGYALTQAIR 114
>gi|218779452|ref|YP_002430770.1| response regulator receiver protein [Desulfatibacillum alkenivorans
AK-01]
gi|218760836|gb|ACL03302.1| Protein with response regulator receiver domain [Desulfatibacillum
alkenivorans AK-01]
Length = 243
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQ 67
A L L +E+D D +L VDD K RLL S V AV G RA+
Sbjct: 111 AELALRQEELDQQDRKT-------ILIVDDDNQVLKSFSRLLRHSPWNVYAVSHGERAMN 163
Query: 68 FLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
L ++ KVDL++TD MPG+ G EL+ +I+
Sbjct: 164 LLNVE-----------KVDLVVTDIKMPGIHGLELISRIR 192
>gi|119471019|ref|ZP_01613578.1| response regulator [Alteromonadales bacterium TW-7]
gi|119445859|gb|EAW27140.1| response regulator [Alteromonadales bacterium TW-7]
Length = 668
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD + + R+L + KV+ +SG AL++L + V +I+TD
Sbjct: 5 ILLVDDEVNVLRSLRRVLQRAGFKVSVAESGPEALEYLKTSD-----------VSIIVTD 53
Query: 92 YCMPGMTGYELLKKIKVTTP 111
Y MP MTG +LL+++K+ P
Sbjct: 54 YRMPNMTGADLLREVKIHWP 73
>gi|381168224|ref|ZP_09877424.1| Putative two-component sensor histidine kinase, unorthodox system
[Phaeospirillum molischianum DSM 120]
gi|380682735|emb|CCG42242.1| Putative two-component sensor histidine kinase, unorthodox system
[Phaeospirillum molischianum DSM 120]
Length = 1865
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VLA +D+ V+R V++ +LT++ +T GR AL L E++ F D+++TD
Sbjct: 1616 VLAAEDNEVNRLVLDEMLTLTGAVLTLAVDGREALAIL---EQKGEAAF-----DVVLTD 1667
Query: 92 YCMPGMTGYELLKKIKVTTP 111
MP M GYEL +++ P
Sbjct: 1668 IQMPEMDGYELARRLSALAP 1687
>gi|407801786|ref|ZP_11148629.1| sensor histidine kinase/response regulator [Alcanivorax sp. W11-5]
gi|407024103|gb|EKE35847.1| sensor histidine kinase/response regulator [Alcanivorax sp. W11-5]
Length = 781
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 66/173 (38%), Gaps = 50/173 (28%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
D SP+ + VL V+D+ V++ V+ LL T G AL+ L
Sbjct: 644 DPSPTSFVGIKVLLVEDNAVNQMVVRALLGRLGVSATLASGGEEALELLA---------- 693
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFP 140
G + DLI+ D MPG+ GYE ++I+
Sbjct: 694 AGDRFDLILMDCEMPGLDGYETTRRIR--------------------------------- 720
Query: 141 FFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
L + S L P++ +++ + +RCL G +D + KP+ L V
Sbjct: 721 -------LLERSGRLPHRPIIALTAHALSEHRERCLAAGMDDHLSKPLTLQQV 766
>gi|291295292|ref|YP_003506690.1| response regulator receiver protein [Meiothermus ruber DSM 1279]
gi|290470251|gb|ADD27670.1| response regulator receiver protein [Meiothermus ruber DSM 1279]
Length = 295
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDDS RKV+E+LL+ VT +S EQ ++ + +L+I D
Sbjct: 6 VLVVDDSTSVRKVLEKLLSSRGLVVTTSESA-----------EQGLDAINHHAPNLVIAD 54
Query: 92 YCMPGMTGYELLKKIK 107
MPGM+G+EL + +K
Sbjct: 55 VVMPGMSGFELCQMLK 70
>gi|410089109|ref|ZP_11285737.1| sensory box histidine kinase/response regulator [Pseudomonas
viridiflava UASWS0038]
gi|409763636|gb|EKN48592.1| sensory box histidine kinase/response regulator [Pseudomonas
viridiflava UASWS0038]
Length = 1194
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P+D +H+L VDD +R V+ R L +V VD G E ++N +
Sbjct: 945 TPADQRSLHLLVVDDLSANRMVLTRQLEFLGHQVVPVDGG-----------ETALNVWRE 993
Query: 83 LKVDLIITDYCMPGMTGYELLKKIK 107
+ D +ITD MPG++GY L + I+
Sbjct: 994 GEFDAVITDCNMPGISGYALTEAIR 1018
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V++ R ++ LL S +V +G +A + L + +N +D+++
Sbjct: 85 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL-----EDLNNH----IDIVL 135
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI LN +
Sbjct: 136 TEVIMPYLSGISLLSKI----------------LNHK----------------------- 156
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ R IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 157 ----SRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWR 205
>gi|357470051|ref|XP_003605310.1| hypothetical protein MTR_4g028380 [Medicago truncatula]
gi|355506365|gb|AES87507.1| hypothetical protein MTR_4g028380 [Medicago truncatula]
Length = 197
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFI 132
G KV+L+ITD+CMPGM YELLKKIKV+ + V L+N F I
Sbjct: 61 GSKVNLVITDHCMPGMRDYELLKKIKVSLKVSIFACGCFVTNYLRNKFWRI 111
>gi|399520589|ref|ZP_10761361.1| chemotaxis protein CheV [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399111078|emb|CCH37920.1| chemotaxis protein CheV [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 310
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS V RK + R L +VTA++ GR AL +L ++ N L ++I+
Sbjct: 180 HVLIVDDSSVARKQVLRCLQTVGVEVTALNDGREALNYLKKMADEGHNPDKELL--MLIS 237
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
D MP M GY L +I+ L+ I++ +L +F
Sbjct: 238 DIEMPEMDGYTLTTEIRSDPRMQKLH--ILLHTSLSGVF 274
>gi|410460497|ref|ZP_11314174.1| integral membrane sensor hybrid histidine kinase [Bacillus
azotoformans LMG 9581]
gi|409927016|gb|EKN64164.1| integral membrane sensor hybrid histidine kinase [Bacillus
azotoformans LMG 9581]
Length = 1023
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 55/184 (29%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D E ++ VDD+ + +V+ L + + AVD+G+ A F L++ I
Sbjct: 676 DPEGKKIMIVDDNHSNLRVLIEALNSENYYIIAVDNGKDA--FTQLEQHPDI-------- 725
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DLI+ D MPG+ G+E+ KKI+
Sbjct: 726 DLILLDIMMPGLNGFEVCKKIR-------------------------------------- 747
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDY-LTRD 203
+ +L E+PV+++++ + + + GA DF+ KP++L+++K R+K+ L +D
Sbjct: 748 -----EKYSLTELPVLMLTAAILAEDMVAGFQAGANDFLHKPIELNELKTRMKNLILMKD 802
Query: 204 VNLG 207
L
Sbjct: 803 TALA 806
>gi|291280728|ref|YP_003497562.1| two-component system, chemotaxis family, sensor kinase CheA
[Deferribacter desulfuricans SSM1]
gi|290755430|dbj|BAI81806.1| two-component system, chemotaxis family, sensor kinase CheA
[Deferribacter desulfuricans SSM1]
Length = 704
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
+ ++ ++++ +DDS DRK+++RLL I S + + +G+ AL
Sbjct: 579 NQSQNLNIMIIDDSATDRKIMKRLLNNIGSFNIIEITNGKDALA-----------AAKQF 627
Query: 84 KVDLIITDYCMPGMTGYELLKKIK 107
+ DLIITD MP M G+E+ KK++
Sbjct: 628 QFDLIITDIYMPDMDGFEIAKKLR 651
>gi|171057589|ref|YP_001789938.1| two component LuxR family transcriptional regulator [Leptothrix
cholodnii SP-6]
gi|170775034|gb|ACB33173.1| two component transcriptional regulator, LuxR family [Leptothrix
cholodnii SP-6]
Length = 235
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLL--TISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
SP+ ++H+L VDD + R+ ++R+L T + V SG +AL+ + Q I
Sbjct: 6 SPNPLHDLHILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVM---RHQPI--- 59
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTP 111
DL I D MPGM G +L+K+I+ P
Sbjct: 60 -----DLAIVDLSMPGMNGLDLIKRIRTEFP 85
>gi|315649065|ref|ZP_07902158.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315275500|gb|EFU38855.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 888
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 55/177 (31%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
SD + +L VDD V+ KVI LL+ +T V AL+ L EQ+ +
Sbjct: 550 SDQDVFRLLVVDDDPVNLKVIRGLLSGEGYWITVVTQAEEALRLL----EQA-------E 598
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
DLII+D MP M+GYEL ++I+
Sbjct: 599 WDLIISDVMMPQMSGYELSRRIR------------------------------------- 621
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
L E+P++++++ + I GA D+++KPV ++K R++ L
Sbjct: 622 ------QRYMLAELPILLLTARSQPEDIHMGFMSGANDYLIKPVDHLELKTRVRALL 672
>gi|22298565|ref|NP_681812.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
gi|22294745|dbj|BAC08574.1| two-component hybrid sensor & regulator [Thermosynechococcus
elongatus BP-1]
Length = 871
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 52/167 (31%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
SP VL VDDS R++++R+L + V G+ AL FL +Q
Sbjct: 733 SPQQPITPQVLIVDDSITVRRLLDRVLRQAGYNVVQCRDGKEALDFLLAAGDQ------- 785
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFF 142
V L+ITD MP + GY+LL+ I++
Sbjct: 786 --VSLVITDIEMPRLDGYDLLEAIRL---------------------------------- 809
Query: 143 FPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
S+ LR +PV +++S + L+ GA +I KP +
Sbjct: 810 ---------SARLRHLPVAMLTSRGGDTHRQKALQLGANGYITKPFQ 847
>gi|297171027|gb|ADI22041.1| FOG: CheY-like receiver [uncultured myxobacterium HF0200_05J13]
Length = 393
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD +R VI L S +T +SG+RAL+ L E V +I+TD
Sbjct: 10 ILYVDDDEANR-VIFDLTFKGSFNITTAESGKRALEILASQE-----------VSVILTD 57
Query: 92 YCMPGMTGYELLKKIKVTTP 111
MPGMTG ELLK +K P
Sbjct: 58 QRMPGMTGNELLKHVKDNHP 77
>gi|218662845|ref|ZP_03518775.1| two-component response regulator protein [Rhizobium etli IE4771]
Length = 274
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+ HVL VDDS R ++ L + +V+ DSG +AL+ L + + +
Sbjct: 131 NQRHHVLIVDDSATARALLSSRLKRYNFRVSVADSGGKALEILKANRD----------IG 180
Query: 87 LIITDYCMPGMTGYELLKKIKVT 109
L+ITDY MP + G+EL ++I+
Sbjct: 181 LMITDYNMPDIDGFELTRRIRAN 203
>gi|218463677|ref|ZP_03503768.1| two-component response regulator protein [Rhizobium etli Kim 5]
Length = 262
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ DSG +AL+ L + + + L+IT
Sbjct: 129 HVLIVDDSATARALLSSRLKRYNFRVSVADSGGKALEILKANRD----------IGLMIT 178
Query: 91 DYCMPGMTGYELLKKIKVT 109
DY MP + G+EL ++I+
Sbjct: 179 DYNMPDIDGFELTRRIRAN 197
>gi|322435954|ref|YP_004218166.1| response regulator receiver protein [Granulicella tundricola
MP5ACTX9]
gi|321163681|gb|ADW69386.1| response regulator receiver protein [Granulicella tundricola
MP5ACTX9]
Length = 133
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 54/168 (32%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAV---DSGRRALQFLGLDEEQSINGFDGLKVD 86
+ VL VDDS V RKV+ER L S +TAV + G++AL L ++ + D
Sbjct: 1 MRVLIVDDSAVMRKVVERALRQSGLPITAVLQANDGQQALDLLREPTQEPL--------D 52
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LI+TD MPG+ G + L++ N Q+L P
Sbjct: 53 LILTDINMPGLGGLDFLEQ-----------------RNQQSL--------------APGT 81
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
PVV++++E A + R + GA+ +I KP ++
Sbjct: 82 ------------PVVMITTEGSEALVHRAIAAGAKGYICKPFTAEQIR 117
>gi|443476008|ref|ZP_21065934.1| multi-sensor hybrid histidine kinase, partial [Pseudanabaena biceps
PCC 7429]
gi|443019063|gb|ELS33214.1| multi-sensor hybrid histidine kinase, partial [Pseudanabaena biceps
PCC 7429]
Length = 862
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 58/163 (35%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E H+L VDD + +R V+ LL T ++G++ ++ +EQS DL
Sbjct: 699 ERQHLLVVDDRWENRAVLMNLLEPLGFTFTEAENGKKGIE---KAKEQSF--------DL 747
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
I+TD MP M G+E+LKK++
Sbjct: 748 IVTDLAMPVMDGFEMLKKLR---------------------------------------- 767
Query: 148 LEQDSSALREIPVVIMSSENILARIDR--CLEDGAEDFIVKPV 188
+ AL+ + V++ S+ ++ IDR LE G +DF+ KPV
Sbjct: 768 ---NDEALKWLRVIVSSAS--VSEIDRQISLEAGGDDFLAKPV 805
>gi|421615431|ref|ZP_16056455.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri KOS6]
gi|409782504|gb|EKN62059.1| sensory box histidine kinase/response regulator [Pseudomonas
stutzeri KOS6]
Length = 793
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD R+V ++L VT DSG ALQ L N D VDL++ D
Sbjct: 675 ILLVDDDHSVREVTAQMLKNLGFAVTTADSGDEALQRLA-------NATD---VDLLLAD 724
Query: 92 YCMPGMTGYELLKKIKVTTP 111
+ MPGM G EL + ++ P
Sbjct: 725 FAMPGMNGGELARTVRARHP 744
>gi|428298236|ref|YP_007136542.1| response regulator receiver modulated diguanylate cyclase
[Calothrix sp. PCC 6303]
gi|428234780|gb|AFZ00570.1| response regulator receiver modulated diguanylate cyclase
[Calothrix sp. PCC 6303]
Length = 349
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 30/184 (16%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L DD R ++ + +V V +G++ LQ F +K DLI+ D
Sbjct: 16 ILVADDDKTIRLLLREFMEKEGYRVVEVGNGKQCLQ-----------AFQEMKPDLILMD 64
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M G+ K + N ++ N +N F SN +
Sbjct: 65 AIMPEMDGFTCCKHLIQIARNNL----VLALANFEN------------GDSFGSNII--- 105
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNLGNEGR 211
SS + P+++++ N +DR E GA DF+ KP+ + +++ L + L +
Sbjct: 106 SSLWEKTPILMITGLNDPESVDRAFESGASDFVTKPIHWAVLRQRVRRLLQQAQLYKQLE 165
Query: 212 GINK 215
N+
Sbjct: 166 AANQ 169
>gi|50400707|sp|Q9ZVD3.2|ARR13_ARATH RecName: Full=Putative two-component response regulator ARR13
Length = 572
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCK---VTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+++V+ VDD+ V + R+L S + V AVD ++AL L + +
Sbjct: 15 KINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRD---------NI 65
Query: 86 DLIITDYCMPGMTGYELLKKI 106
DLIITDY MPGM G +L K+I
Sbjct: 66 DLIITDYYMPGMNGLQLKKQI 86
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R ++ LL S V AV G +A + EE++ N D+I+
Sbjct: 73 LRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIV---EEKNFN------FDIIL 123
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
++ +P +G LL KI T LS
Sbjct: 124 SEVEVPSFSGINLLSKIMGTE----------------------LS--------------- 146
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
R IPV++MSS++ ++ + +C++ GA DF+VKPV+ ++++ + ++ R
Sbjct: 147 ------RSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVWR 193
>gi|197118029|ref|YP_002138456.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
gi|197087389|gb|ACH38660.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
Length = 406
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDDS DRK+I C+V +G++ L+ + K DLII
Sbjct: 1 MKVLVVDDSRNDRKIIRYNFEWHGCEVLEASNGKQGLELAAAE-----------KPDLII 49
Query: 90 TDYCMPGMTGYELLKKIK-----VTTPFNFLYSTI 119
+D MP M G++ L +IK T PF F YS +
Sbjct: 50 SDCLMPVMDGFQFLHEIKKFQDTKTIPFIF-YSAV 83
>gi|346306035|gb|AEO22193.1| RpfC [Xanthomonas campestris pv. pelargonii]
Length = 724
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ EQ ++ D +I
Sbjct: 460 MRMLVADDHEANRMVLQRLLEKAGHKVRCVNGA-----------EQVLDAMAEKDFDAVI 508
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 509 VDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVL 541
>gi|288960047|ref|YP_003450387.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
gi|288912355|dbj|BAI73843.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
Length = 748
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
+ H+L VDDS R + + +L +VT GR AL+ L +G++V+L
Sbjct: 627 DRAHILVVDDSITTRTLEKSILEAHGYRVTLCVDGREALERLS----------EGMEVEL 676
Query: 88 IITDYCMPGMTGYELLKKIKV 108
II+D MP M G+ LL+ +K
Sbjct: 677 IISDVEMPRMDGFALLQAVKA 697
>gi|241767083|ref|ZP_04764858.1| response regulator receiver modulated CheW protein [Acidovorax
delafieldii 2AN]
gi|241362354|gb|EER58337.1| response regulator receiver modulated CheW protein [Acidovorax
delafieldii 2AN]
Length = 319
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL-GLDEEQSINGFDGL-KVDLII 89
VLA DDSFV R +IE+ L I V SG+ A L L + + G L KV L++
Sbjct: 190 VLAADDSFVARSLIEQELQILQAPFEMVKSGQEAWDRLNALAVQAAAEGKTVLDKVSLVL 249
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFL 115
TD MP M G+ L + IK F L
Sbjct: 250 TDLEMPEMDGFTLTRHIKQDARFQGL 275
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A ++L E+ N +DL++T+
Sbjct: 85 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL---EDLQNN------IDLVLTE 135
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI IC
Sbjct: 136 VFMPCLSGIGLLSKITSHK------------------------IC--------------- 156
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MS+ + ++ + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 157 ----KDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWR 203
>gi|339498727|ref|YP_004696762.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
gi|338833076|gb|AEJ18254.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
Length = 242
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 54/163 (33%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
++ H+L V+DS+V ++++L + + + G AL+ L + D
Sbjct: 4 SQHKHILIVEDSYVQAAGLQKILEQAGYSIVRAEHGLEALELLQKEH-----------FD 52
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
L+I+D MP M GY L K IK N LY
Sbjct: 53 LVISDVMMPKMDGYTLCKTIKT----NELY------------------------------ 78
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
+ +PV++++S + A I R +E GA+ FI KP K
Sbjct: 79 ---------KHLPVILVTSLSEPADIIRGIESGADSFIPKPYK 112
>gi|307568303|pdb|3M6M|D Chain D, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
gi|307568304|pdb|3M6M|E Chain E, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
gi|307568305|pdb|3M6M|F Chain F, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
Length = 143
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L DD +R V++RLL + KV V+ EQ ++ D +I D
Sbjct: 17 MLVADDHEANRMVLQRLLEKAGHKVLCVNGA-----------EQVLDAMAEEDYDAVIVD 65
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
MPGM G ++LK+++V Y+ ++V
Sbjct: 66 LHMPGMNGLDMLKQLRVMQASGMRYTPVVVL 96
>gi|336310686|ref|ZP_08565658.1| chemotaxis protein CheV [Shewanella sp. HN-41]
gi|335866416|gb|EGM71407.1| chemotaxis protein CheV [Shewanella sp. HN-41]
Length = 306
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
ISDE++ L+ T+ H++ +DDS V RK I R L + ++ GR AL L
Sbjct: 163 ISDEVNE-QLTLDRTQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAI 221
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ N D ++ LII+D MP M GY L +I+
Sbjct: 222 ASEMNNVAD--EIPLIISDIEMPEMDGYTLTAEIR 254
>gi|87122617|ref|ZP_01078494.1| putative two domain protein: response regulator receiver domain
protein [Marinomonas sp. MED121]
gi|86162075|gb|EAQ63363.1| putative two domain protein: response regulator receiver domain
protein [Marinomonas sp. MED121]
Length = 265
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 26/115 (22%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQ 67
A++ +IS+ D +L DT+ + VL VDDS + RK I R+L
Sbjct: 126 ATIDIISE--DEIELELFDTKLLRVLIVDDSRLARKHISRVLD----------------- 166
Query: 68 FLGLDE-EQSINGFDGLKV------DLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
+G+ E +Q+ NG + +K+ DLIITDY MP M G EL + ++ + F+ +
Sbjct: 167 GMGIQEPKQAENGVEAIKLLQTEAFDLIITDYNMPEMDGRELTEAVRNSGEFSHI 221
>gi|408672306|ref|YP_006872054.1| multi-sensor hybrid histidine kinase [Emticicia oligotrophica DSM
17448]
gi|387853930|gb|AFK02027.1| multi-sensor hybrid histidine kinase [Emticicia oligotrophica DSM
17448]
Length = 1101
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD+ V+RKV +L + C+V DSG +A++ G +G D+I D
Sbjct: 842 ILLVDDNQVNRKVASEILIKAGCEVLTADSGAKAIEVFG----------EGHGFDVIFMD 891
Query: 92 YCMPGMTGYELLKKIK 107
MP M G E K+++
Sbjct: 892 IQMPEMDGIETTKRLR 907
>gi|410644220|ref|ZP_11354702.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola agarilytica NO2]
gi|410136068|dbj|GAC03101.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola agarilytica NO2]
Length = 1172
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 49/164 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
++L V+D+F++++V+ +L C V ++G+ A+ L E + GF DLI+
Sbjct: 1050 NILLVEDNFINQQVVIEMLKKLHCSVQVAENGQEAIHTL----EDADKGF-----DLILM 1100
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D MP M GYE +KI+ NNL
Sbjct: 1101 DCQMPIMDGYEASRKIR--------------------------------------NNLHS 1122
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
+ ++ +P++ +++ + + CL G ++ KP+ L+++K
Sbjct: 1123 NYAS--TLPIIALTANAMKGDREACLSAGMNAYLSKPIILAELK 1164
>gi|399005776|ref|ZP_10708344.1| PAS domain S-box [Pseudomonas sp. GM17]
gi|398125046|gb|EJM14537.1| PAS domain S-box [Pseudomonas sp. GM17]
Length = 958
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 17 IDGFDLSPSDTEE------VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG 70
++ F SP T E + VL VDD +R V+ + L KV A+DS AL
Sbjct: 705 VEDFSQSPQVTRERPQSRRMSVLVVDDVRANRMVLSQQLMFLGHKVVALDSAEAALA--- 761
Query: 71 LDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ G DL++TD MPGM+GY+L + I+
Sbjct: 762 --------RWQGEAFDLVMTDCHMPGMSGYQLSEAIR 790
>gi|32481651|gb|AAP84165.1| RcsC [Pseudomonas aeruginosa PA14]
Length = 1084
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
++ VL +D+ V++ ++ L C+V+ GR+ALQ FD + DL+
Sbjct: 850 DLEVLVAEDNPVNQALLREQLEELGCRVSLAGDGRQALQL-----------FDSGRFDLL 898
Query: 89 ITDYCMPGMTGYELLKKIK 107
++D MP MTGYEL + ++
Sbjct: 899 LSDVNMPNMTGYELTQALR 917
>gi|117618949|ref|YP_856744.1| two-component system sensor protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560356|gb|ABK37304.1| two-component system sensor protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 1060
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 5 NGVASLRLISDEIDGFDLSPSDTEE-----VHVLAVDDSFVDRKVIERLLTISSCKVTAV 59
N VA RLI ++ + DL S VH+L VDDS ++ +V RLL +V
Sbjct: 705 NAVA--RLIHEKREHVDLLESGQRRLRLPGVHILLVDDSDINLEVATRLLQREGAEVITA 762
Query: 60 DSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
G RAL L D Q ++DL++ D MP M GYE ++++
Sbjct: 763 IDGERALTCLA-DPAQ--------RIDLVLMDVQMPVMDGYEATRRLR 801
>gi|116052651|ref|YP_792966.1| kinase sensor protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|421176764|ref|ZP_15634423.1| putative kinase sensor protein [Pseudomonas aeruginosa CI27]
gi|237651846|gb|AAM15534.2|AF482691_3 putative sensor kinase [Pseudomonas aeruginosa]
gi|115587872|gb|ABJ13887.1| putative kinase sensor protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|404530401|gb|EKA40401.1| putative kinase sensor protein [Pseudomonas aeruginosa CI27]
Length = 1084
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
++ VL +D+ V++ ++ L C+V+ GR+ALQ FD + DL+
Sbjct: 850 DLEVLVAEDNPVNQALLREQLEELGCRVSLAGDGRQALQL-----------FDSGRFDLL 898
Query: 89 ITDYCMPGMTGYELLKKIK 107
++D MP MTGYEL + ++
Sbjct: 899 LSDVNMPNMTGYELTQALR 917
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R ++ LL S +V A +G A + L E N +DL++T+
Sbjct: 91 VLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKML----EDLTN-----HIDLVLTE 141
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI +
Sbjct: 142 VVMPCLSGIGLLCKI-------------------------------------------MN 158
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 159 HKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 209
>gi|332307944|ref|YP_004435795.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola sp. 4H-3-7+YE-5]
gi|410639810|ref|ZP_11350355.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola chathamensis
S18K6]
gi|332175273|gb|AEE24527.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola sp. 4H-3-7+YE-5]
gi|410140691|dbj|GAC08542.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola chathamensis
S18K6]
Length = 1172
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 49/164 (29%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
++L V+D+F++++V+ +L C V ++G+ A+ L E + GF DLI+
Sbjct: 1050 NILLVEDNFINQQVVIEMLKKLHCSVQVAENGQEAIHTL----EDADKGF-----DLILM 1100
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQ 150
D MP M GYE +KI+ NNL
Sbjct: 1101 DCQMPIMDGYEASRKIR--------------------------------------NNLHS 1122
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
+ ++ +P++ +++ + + CL G ++ KP+ L+++K
Sbjct: 1123 NYAS--TLPIIALTANAMKGDREACLSAGMNAYLSKPIILAELK 1164
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V++ R ++ LL S +V V +G +A + L + +N +D+++
Sbjct: 74 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVL-----EDLNNH----IDIVL 124
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI LN +
Sbjct: 125 TEVVMPYLSGIGLLCKI----------------LNHK----------------------- 145
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ R IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 146 ----SRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWR 194
>gi|15225844|ref|NP_180275.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
gi|3885337|gb|AAC77865.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330252838|gb|AEC07932.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
Length = 575
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCK---VTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+++V+ VDD+ V + R+L S + V AVD ++AL L + +
Sbjct: 15 KINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRD---------NI 65
Query: 86 DLIITDYCMPGMTGYELLKKI 106
DLIITDY MPGM G +L K+I
Sbjct: 66 DLIITDYYMPGMNGLQLKKQI 86
>gi|293606829|ref|ZP_06689180.1| sensor histidine kinase with CheB and CheR activity [Achromobacter
piechaudii ATCC 43553]
gi|292814833|gb|EFF73963.1| sensor histidine kinase with CheB and CheR activity [Achromobacter
piechaudii ATCC 43553]
Length = 1372
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDDS ++ LL + VTAV SGR ALQ F+ DL++
Sbjct: 1252 LKVLIVDDSEDILHIMRELLEMEEASVTAVGSGRDALQ-----------AFETTSFDLLL 1300
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFL 115
+D M M GYEL++ I+ P N L
Sbjct: 1301 SDIGMADMDGYELIRAIREKYPDNAL 1326
>gi|119483445|ref|ZP_01618859.1| adenylate cyclase [Lyngbya sp. PCC 8106]
gi|119458212|gb|EAW39334.1| adenylate cyclase [Lyngbya sp. PCC 8106]
Length = 1361
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 56/205 (27%)
Query: 21 DLSPS-DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING 79
+L+PS + + +L VDD ++ +V+ L + + VT SG A++ L
Sbjct: 880 NLTPSLNHNQFKILIVDDDPINLQVLVNYLCLQNYAVTQASSGIEAMEILEA-------- 931
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCF 139
G DLI+ D MP MTGYE+ ++I+ T P +
Sbjct: 932 --GYIPDLILLDVMMPRMTGYEVTRRIRETWPPH-------------------------- 963
Query: 140 PFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKD 198
++P+++++++N ++ + LE GA D++ KP+ + + RIK
Sbjct: 964 -----------------QLPIMMLTAKNQVSDLVAGLEVGANDYLSKPLNKDELLARIKT 1006
Query: 199 YLTRDVNLGNEGRGINKRKARESCD 223
++ R L E I K R D
Sbjct: 1007 HI-RIKQLRTEKAHIRKTFGRYVTD 1030
>gi|17228134|ref|NP_484682.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
gi|17129984|dbj|BAB72596.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 820
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 60/166 (36%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDE-EQSINGFDGLKVDLII 89
H+L VDD + +R V+ LL +T ++G+ GLD+ +Q + DL+I
Sbjct: 617 HILVVDDRWENRAVLLNLLEPLGFIITEAENGQ-----AGLDQLQQHLP-------DLVI 664
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD MP M G+E+L+KI+ E
Sbjct: 665 TDLVMPVMDGFEMLRKIR-----------------------------------------E 683
Query: 150 QDSSALREIPVVIMSSENILARIDR--CLEDGAEDFIVKPVKLSDV 193
Q+ LR + +++ S+ +A+ID+ ++ G +DF+ KPV+++D+
Sbjct: 684 QEQ--LRSLKILVSSAS--VAQIDQQMSIDAGGDDFLAKPVQVNDL 725
>gi|226310343|ref|YP_002770237.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226093291|dbj|BAH41733.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1067
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ ++LA+DD V+ +V++R+L+ S ++T S R AL L ++ DL+
Sbjct: 729 KANILAIDDDPVNLRVLDRMLSSSHYQITTCASPRDALDLLFTEQ-----------WDLL 777
Query: 89 ITDYCMPGMTGYELLKKIK 107
I D MP M+GYEL ++++
Sbjct: 778 IIDVMMPHMSGYELTQRVR 796
>gi|144898932|emb|CAM75796.1| response regulator/GGDEF domain protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 415
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ + VDD+ RK I LL + +V +G +ALQ L D + L+I
Sbjct: 124 IRAMVVDDATTARKYIADLLALYQFQVVEATNGEQALQRLA----------DTDNIRLVI 173
Query: 90 TDYCMPGMTGYELLKKIKVT 109
TDY MP M G++L+K I+ T
Sbjct: 174 TDYHMPVMDGFQLIKNIRKT 193
>gi|261408948|ref|YP_003245189.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261285411|gb|ACX67382.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1049
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 70/178 (39%), Gaps = 58/178 (32%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
PSD +L VDD V+ KVI LL ++ V ALQ L EQ
Sbjct: 716 PSDGR---LLIVDDDPVNLKVIHHLLADEGYRIVTVTRAEEALQLL----EQG------- 761
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFF 143
+ DLII+D MP M+GYEL + I+
Sbjct: 762 EWDLIISDVMMPQMSGYELSRTIR------------------------------------ 785
Query: 144 PSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
L E+P++++++ N I GA D+++KPV ++K R++ L
Sbjct: 786 -------QRYMLSELPILLLTARNRPEDIHMGFISGANDYLIKPVDHLELKTRVRALL 836
>gi|430744391|ref|YP_007203520.1| PAS domain-containing protein [Singulisphaera acidiphila DSM 18658]
gi|430016111|gb|AGA27825.1| PAS domain S-box [Singulisphaera acidiphila DSM 18658]
Length = 1159
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 56/170 (32%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
+ + + VL VDDS R+++ L S +V +G AL + LD +G
Sbjct: 649 ELQGLRVLVVDDSGTSREILTDALESMSFEVGVATTGAEAL--VALDRAAD----EGRPF 702
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DL++ DY MPGM G E ++IK
Sbjct: 703 DLVLMDYKMPGMDGIEAARRIK-------------------------------------- 724
Query: 146 NNLEQDSSALREIPVVIMSS----ENILARIDRCLEDGAEDFIVKPVKLS 191
SS L + P V+M + E I++R +R G E F++KPV S
Sbjct: 725 -----KSSRLHQAPTVVMVTAYGREEIMSRAERV---GVEGFLIKPVGQS 766
>gi|444427882|ref|ZP_21223247.1| hypothetical protein B878_18021 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444238888|gb|ELU50474.1| hypothetical protein B878_18021 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 281
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRAL-QFLGLDEEQSINGFDGLKVDLIIT 90
VL DDS V RK +ER +T +V +V G+ A + L + +E SI +D ++ L+I+
Sbjct: 157 VLIADDSTVARKQVERAITSIGFEVVSVKDGKEAYNKLLEMAQEGSI--YD--QISLVIS 212
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
D MP M GY L +I+ LY +I+ +L +F
Sbjct: 213 DIEMPEMDGYTLTAEIRRNADLKNLY--VILHSSLSGVF 249
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R ++ LL S +VTAV A + L ++E S +DL++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVL--EDENSC-------IDLVLTE 116
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP +G LL KI + T
Sbjct: 117 VVMPVNSGTGLLSKI-------MSHQT--------------------------------- 136
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL +GA DF+VKP++ +++K + ++ R
Sbjct: 137 ---LKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWR 184
>gi|325922143|ref|ZP_08183933.1| Signal transduction histidine kinase [Xanthomonas gardneri ATCC
19865]
gi|325547378|gb|EGD18442.1| Signal transduction histidine kinase [Xanthomonas gardneri ATCC
19865]
Length = 724
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ EQ ++ D +I
Sbjct: 460 MRMLVADDHEANRMVLQRLLEKAGHKVRCVNGA-----------EQVLDAMAEEDFDAVI 508
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 509 VDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVL 541
>gi|345865788|ref|ZP_08817959.1| PAS/PAC sensor hybrid histidine kinase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345123112|gb|EGW53021.1| PAS/PAC sensor hybrid histidine kinase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 750
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L VDD ++ LL C+VTAVD+ ++AL+ +D +S DL+I+
Sbjct: 630 HLLVVDDEHSLIDYLQDLLQSQGCRVTAVDNAQKALECF-MDAPESF--------DLVIS 680
Query: 91 DYCMPGMTGYELLKKIKVTTP 111
D MP MTG EL +++ P
Sbjct: 681 DQIMPNMTGSELARRLLAIRP 701
>gi|325916716|ref|ZP_08178973.1| Signal transduction histidine kinase [Xanthomonas vesicatoria ATCC
35937]
gi|325537065|gb|EGD08804.1| Signal transduction histidine kinase [Xanthomonas vesicatoria ATCC
35937]
Length = 726
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ EQ ++ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGA-----------EQVLDAMAEEDFDAVI 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 511 VDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVL 543
>gi|309790612|ref|ZP_07685166.1| PAS/PAC sensor hybrid histidine kinase [Oscillochloris trichoides
DG-6]
gi|308227340|gb|EFO81014.1| PAS/PAC sensor hybrid histidine kinase [Oscillochloris trichoides
DG6]
Length = 973
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 15 DEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE 74
D+I LS T ++HVL VDD R V+ RLL +VT V G AL + E
Sbjct: 831 DQIIQAALSVVATRQLHVLVVDDDRYVRPVLVRLLQRHGFRVTNVADGLTALTII----E 886
Query: 75 QSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLN 124
Q+ + D+++ D MPG+ G E+L++IK P + II+ N
Sbjct: 887 QA-------RPDVVLLDVKMPGIDGTEVLRRIK-ENPLTAMTRVIILTAN 928
>gi|254444474|ref|ZP_05057950.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198258782|gb|EDY83090.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 482
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 55/170 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD+ R+ IE LLT S + DSG AL+ L EE + D+I+ D
Sbjct: 9 ILVVDDNLGARRSIEALLTQESYRFLLADSGVVALELL---EEHT--------PDVILLD 57
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM+G+E +KI+
Sbjct: 58 VMMPGMSGFETCQKIRA------------------------------------------- 74
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYL 200
+S + EIP++++++ + + + ++ GA+DF+ KP+ K+ RI+ L
Sbjct: 75 NSRVSEIPIIMITALDDEESMIQGIDAGADDFLSKPISKIELRSRIRSIL 124
>gi|94500236|ref|ZP_01306769.1| probable chemotaxis protein [Oceanobacter sp. RED65]
gi|94427535|gb|EAT12512.1| probable chemotaxis protein [Oceanobacter sp. RED65]
Length = 315
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL DDS + RK + R L +VTA++ G++A + L IN D L+++D
Sbjct: 182 VLIADDSKIARKQVTRCLEALGVEVTAMNDGKQAFEHLKQMLADGINPVD--HYALMVSD 239
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
MP M GY L KI+ N ++ II+ +L +F
Sbjct: 240 IEMPEMDGYTLTTKIRSDDALNKMH--IILHTSLSGVF 275
>gi|421099140|ref|ZP_15559800.1| response regulator receiver domain protein [Leptospira
borgpetersenii str. 200901122]
gi|410797874|gb|EKR99973.1| response regulator receiver domain protein [Leptospira
borgpetersenii str. 200901122]
Length = 257
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 6 GVASLRLISDEIDGFDLSPSDTEEVHV---LAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
G+ L+L+ EI F + E+ V L VDDS ++ ++ ++L + A G
Sbjct: 112 GIDELKLVIKEIIKFSYQKNSIEQRKVGKILIVDDSELNLLLLGKILERNGYSFQAFTEG 171
Query: 63 RRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
++A ++L EE + I+TD+ MPG +G EL++ I+ F+ + T+I
Sbjct: 172 KKAYEYLQSSEEN---------ISYILTDWIMPGFSGQELVEAIRKQEKFDTIPITVITG 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|425897733|ref|ZP_18874324.1| sensory box histidine kinase/response regulator [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397892234|gb|EJL08712.1| sensory box histidine kinase/response regulator [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 1191
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 17 IDGFDLSPSDTEE------VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG 70
++ F SP T E + VL VDD +R V+ + L KV A+DS AL
Sbjct: 938 VEDFSQSPQVTRERPQSRRMSVLVVDDVRANRMVLSQQLMFLGHKVVALDSAEAALA--- 994
Query: 71 LDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ G DL++TD MPGM+GY+L + I+
Sbjct: 995 --------RWQGEAFDLVMTDCHMPGMSGYQLSEAIR 1023
>gi|392535193|ref|ZP_10282330.1| response regulator [Pseudoalteromonas arctica A 37-1-2]
Length = 549
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 54/158 (34%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+HVL VDD ++R ++ ++L K++ +G AL L ++ +D+++
Sbjct: 2 IHVLIVDDQALNRILLSKMLEQEGYKISVAYNGLDALNVLKREQ-----------IDVVL 50
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
D MP M G+E +KIK YS +
Sbjct: 51 LDVLMPVMDGFEAAEKIKQQ------YSEVY----------------------------- 75
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+P++ ++S A +RCLE G +DFI KP
Sbjct: 76 --------LPIIFITSLEDQASFERCLEVGGDDFIHKP 105
>gi|302843336|ref|XP_002953210.1| hypothetical protein VOLCADRAFT_93905 [Volvox carteri f.
nagariensis]
gi|300261597|gb|EFJ45809.1| hypothetical protein VOLCADRAFT_93905 [Volvox carteri f.
nagariensis]
Length = 1844
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L+VDD V++ V++ LL + +V AV SG AL+++ DL++ D
Sbjct: 774 LLSVDDDHVNQSVVKSLLGSTGYEVVAVPSGPEALRYVATAPALP---------DLVLLD 824
Query: 92 YCMPGMTGYELLKKIKVTTP 111
MP M GYE+L++++ TP
Sbjct: 825 CMMPEMDGYEVLQRLRAMTP 844
>gi|357469965|ref|XP_003605267.1| hypothetical protein MTR_4g027810 [Medicago truncatula]
gi|355506322|gb|AES87464.1| hypothetical protein MTR_4g027810 [Medicago truncatula]
Length = 165
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFL 130
G KV+L+ITD+CMPGM YELLKKIKV+ + V L+N F
Sbjct: 29 GSKVNLVITDHCMPGMRDYELLKKIKVSLKVSIFACGCFVTNYLRNKFW 77
>gi|253701180|ref|YP_003022369.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter sp. M21]
gi|251776030|gb|ACT18611.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter sp. M21]
Length = 406
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDDS DRK+I C+V +G++ L+ + K DLI+
Sbjct: 1 MKVLVVDDSRNDRKIIRYNFEWHGCEVLEASNGKQGLELAAAE-----------KPDLIV 49
Query: 90 TDYCMPGMTGYELLKKIK-----VTTPFNFLYSTI 119
+D MP M G++ L +IK T PF F YS +
Sbjct: 50 SDCLMPVMDGFQFLHEIKKFQDTKTIPFIF-YSAV 83
>gi|218782319|ref|YP_002433637.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
gi|218763703|gb|ACL06169.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
Length = 301
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 55/170 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L +DDS + V + +LT +VT +G E+ + +K DLI+ D
Sbjct: 4 ILVIDDSRLIAHVAKNMLTARGHEVTVATNG-----------EEGLEAVATIKPDLILLD 52
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM GY + +KIK
Sbjct: 53 LIMPGMDGYAVCEKIK-------------------------------------------G 69
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
S A +IPV++++S+ A R LE GA D++ KP + + V R+ +L
Sbjct: 70 SPATADIPVIMLTSKAETADKVRGLEAGASDYVTKPFEEGELVARVNTHL 119
>gi|452853162|ref|YP_007494846.1| Response regulator receiver modulated diguanylate cyclase
[Desulfovibrio piezophilus]
gi|451896816|emb|CCH49695.1| Response regulator receiver modulated diguanylate cyclase
[Desulfovibrio piezophilus]
Length = 419
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
++ L VDDS R I RLL +V +G AL+ LG + E + LI
Sbjct: 129 DIKALVVDDSKTMRDSIVRLLKTQLYQVFEAGNGNEALEVLGANPE----------IKLI 178
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFN 113
++DY MP M G+EL+K+++ T N
Sbjct: 179 VSDYEMPEMDGFELIKRVRETYSKN 203
>gi|392545933|ref|ZP_10293070.1| response regulator receiver protein [Pseudoalteromonas rubra ATCC
29570]
Length = 266
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRAL 66
A+L ++S E DL D +E+ +L VDDS + R I R+L + + +++ + G AL
Sbjct: 125 ATLDILSPEELELDLY--DIQELRILVVDDSRLARNHIRRVLNNLGATRISEAEHGAEAL 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
L + DLIITD+ MP + G EL + I+ + N +
Sbjct: 183 TIL-----------EDTMFDLIITDFNMPEVNGQELAEAIRNSNEHNHV 220
>gi|406892098|gb|EKD37544.1| hypothetical protein ACD_75C01094G0008 [uncultured bacterium]
Length = 476
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD R ++ LL KV D+G +AL+ LG QS+ D++++D
Sbjct: 20 VLVVDDERSMRDFLKILLEKEGHKVVTADNGDKALEILG---NQSL--------DVVVSD 68
Query: 92 YCMPGMTGYELLKKIKVTTP 111
MPG+TG ELL+ IK +P
Sbjct: 69 IRMPGITGIELLELIKKESP 88
>gi|418936407|ref|ZP_13490125.1| response regulator receiver modulated diguanylate cyclase
[Rhizobium sp. PDO1-076]
gi|375056835|gb|EHS53041.1| response regulator receiver modulated diguanylate cyclase
[Rhizobium sp. PDO1-076]
Length = 441
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL VDD R ++ LL + +V ++G +AL L D ++L+I
Sbjct: 143 VGVLVVDDVASARAMLVDLLRVQKFQVYDAETGAQALTLLA----------DNPHIELVI 192
Query: 90 TDYCMPGMTGYELLKKIK 107
TDY MP M GYEL ++I+
Sbjct: 193 TDYHMPDMNGYELTRRIR 210
>gi|374629999|ref|ZP_09702384.1| putative PAS/PAC sensor protein [Methanoplanus limicola DSM 2279]
gi|373908112|gb|EHQ36216.1| putative PAS/PAC sensor protein [Methanoplanus limicola DSM 2279]
Length = 1172
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 15/89 (16%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISS-CKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
E + VL +DD + K + L ++ KVTA +S +AL+ L DE K D
Sbjct: 11 EIISVLYIDDELIFLKAGQIYLEFNNDFKVTACESAAKALKLLS-DE----------KFD 59
Query: 87 LIITDYCMPGMTGYELLKKIKV---TTPF 112
II+DY MPGM+G ELL++I+ TPF
Sbjct: 60 AIISDYQMPGMSGTELLRQIRAGSDKTPF 88
>gi|359443561|ref|ZP_09233397.1| sensor protein [Pseudoalteromonas sp. BSi20429]
gi|358034607|dbj|GAA69646.1| sensor protein [Pseudoalteromonas sp. BSi20429]
Length = 986
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 50/165 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D H+L VDD+ ++ +V + +L + K+T G AL+ L + EQ+
Sbjct: 858 DLSAYHILLVDDNMINIEVAKAILKRTKVKITCASDGVEALEALRENTEQAF-------- 909
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTP-FNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
D+I+ D MP + GY+ +I+ + ++ Y
Sbjct: 910 DVILMDCQMPNLNGYDTTSEIRNSKAGVDYTY---------------------------- 941
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
IP++ M++ + +RCL G D+I KP+K
Sbjct: 942 -------------IPIIAMTASAMEGDRERCLTAGMNDYITKPIK 973
>gi|300022157|ref|YP_003754768.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299523978|gb|ADJ22447.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans ATCC 51888]
Length = 456
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 55/168 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD + K++E L +V +SGR+AL L E +S VD+++ D
Sbjct: 5 VLVVDDILANVKLLEARLQAEYFEVLTANSGRQALDLL---ERES--------VDVVLLD 53
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MPGM G+E + IK
Sbjct: 54 VMMPGMDGFETCRHIKA------------------------------------------- 70
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKD 198
S A IPVV++++ + + + LE GA+DF+ KPV ++ V R+K+
Sbjct: 71 SHATHHIPVVMVTALDQPSDKVQGLESGADDFLTKPVDDIALVTRVKN 118
>gi|359452219|ref|ZP_09241574.1| sensor protein [Pseudoalteromonas sp. BSi20495]
gi|358050813|dbj|GAA77823.1| sensor protein [Pseudoalteromonas sp. BSi20495]
Length = 1000
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 48/164 (29%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D +VL VDD+ ++ +V + +L + K+T G AL+ L L E Q+
Sbjct: 872 DLSNFNVLLVDDNMINVEVAKAILKHTKVKITTASDGLEALEVLKLHEGQTF-------- 923
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
D+I+ D MP + GY+ I+
Sbjct: 924 DIILMDCQMPNLNGYDTTSAIRSGKA---------------------------------- 949
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
S +P++ M++ + +RCL G D+I KP+K
Sbjct: 950 ------GSEYSYVPIIAMTASAMEGDRERCLAAGMNDYITKPIK 987
>gi|407922836|gb|EKG15928.1| hypothetical protein MPH_06894 [Macrophomina phaseolina MS6]
Length = 1310
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 40/176 (22%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL--GLDEEQSINGFDGLKVDL 87
+HVL V+D+ ++++V+ L C V+ + G AL FL + + ++G + +D+
Sbjct: 1167 IHVLLVEDNLINQRVLANQLRSKGCLVSVANHGAEALDFLRGTIYAREPLDGKVPILLDV 1226
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
I+ D+ MP M G +++I+ +Q
Sbjct: 1227 ILMDWEMPVMDGLTAVREIR----------------RMQR-------------------- 1250
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV-KRIKDYLTR 202
E D IPV+ +++ +I + +E G +D + KP ++ ++ R+++ ++R
Sbjct: 1251 -EPDGVLRGHIPVIAVTANVRNEQISKAMEAGMDDVVSKPFRVPELCTRMRELISR 1305
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL V++ R V+ LL +V +G +A + L E ++DL++
Sbjct: 84 VRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIEN---------RIDLVL 134
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI
Sbjct: 135 TEVVMPCVSGIALLFKI------------------------------------------- 151
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ + +PVV+MSS + + + +CL GA DF+VKP++ +++K + +L R
Sbjct: 152 MSHKSRKNVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHLWR 204
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 43/117 (36%)
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DL++T+ MP ++G ELL +I
Sbjct: 15 DLVLTEVTMPTLSGIELLSRIVA------------------------------------- 37
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
S + IPV++MSS++ + + RC++ GA DF+VKPV+ ++++ + ++ R
Sbjct: 38 ------SDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVWR 88
>gi|88603927|ref|YP_504105.1| PAS/PAC sensor protein [Methanospirillum hungatei JF-1]
gi|88189389|gb|ABD42386.1| putative PAS/PAC sensor protein [Methanospirillum hungatei JF-1]
Length = 385
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 16/90 (17%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
++VL VDD +++R ++E+LLT V + + G +AL+ L + VDLII
Sbjct: 1 MNVLIVDDQYINRYLLEKLLTGYGYSVLSTEDGMQALETLRTEH-----------VDLII 49
Query: 90 TDYCMPGMTGYELLKKIK-----VTTPFNF 114
+D +P M G++L +++K PF F
Sbjct: 50 SDILLPKMDGFQLCREVKKDPELAKIPFIF 79
>gi|429217977|ref|YP_007179621.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Deinococcus peraridilitoris DSM
19664]
gi|429128840|gb|AFZ65855.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Deinococcus peraridilitoris DSM
19664]
Length = 255
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
VL VDDS RK +E +L + V +SG AL L Q+ K DL+I
Sbjct: 3 QVLVVDDSLSVRKALETILRPLAYTVRMAESGEAALTSLA----QT-------KADLVIA 51
Query: 91 DYCMPGMTGYELLKKIKVT 109
D MPGM+G+EL ++IK +
Sbjct: 52 DVLMPGMSGFELCQQIKAS 70
>gi|66768644|ref|YP_243406.1| RpfC protein [Xanthomonas campestris pv. campestris str. 8004]
gi|338817932|sp|P0C0F7.2|RPFC_XANC8 RecName: Full=Sensory/regulatory protein RpfC
gi|7688441|emb|CAB89845.1| fused two-component sensor-regulator protein [Xanthomonas
campestris]
gi|66573976|gb|AAY49386.1| RpfC protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 726
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ EQ ++ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGA-----------EQVLDAMAEEDYDAVI 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM G ++LK+++V Y+ ++V
Sbjct: 511 VDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVL 543
>gi|410626121|ref|ZP_11336889.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola mesophila KMM 241]
gi|410154340|dbj|GAC23658.1| PAS/PAC sensor hybrid histidine kinase [Glaciecola mesophila KMM 241]
Length = 1172
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L V+D+F++++V+ +L C V ++G+ A+ L EE + K D I+
Sbjct: 1050 HILLVEDNFINQQVVIEMLKKLQCSVQVAENGQEAIHTL---EESEV------KFDAILM 1100
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFL 123
D MP M GYE + I+ + N+ + I+ L
Sbjct: 1101 DCQMPIMDGYEASRTIRKSQHINYTSTLPIIAL 1133
>gi|21231304|ref|NP_637221.1| RpfC protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|338817933|sp|P0C0F6.2|RPFC_XANCP RecName: Full=Sensory/regulatory protein RpfC
gi|21112958|gb|AAM41145.1| RpfC protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
Length = 726
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ EQ ++ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGA-----------EQVLDAMAEEDYDAVI 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM G ++LK+++V Y+ ++V
Sbjct: 511 VDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVL 543
>gi|188991538|ref|YP_001903548.1| Sensory/regulatory protein RpfC [Xanthomonas campestris pv.
campestris str. B100]
gi|167733298|emb|CAP51497.1| Sensory/regulatory protein RpfC [Xanthomonas campestris pv.
campestris]
Length = 726
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ EQ ++ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGA-----------EQVLDAMAEEDYDAVI 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM G ++LK+++V Y+ ++V
Sbjct: 511 VDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVL 543
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 43/117 (36%)
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DL++T+ MP ++G ELL +I
Sbjct: 15 DLVLTEVTMPTLSGIELLSRIVA------------------------------------- 37
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
S + IPV++MSS++ + + RC++ GA DF+VKPV+ ++++ + ++ R
Sbjct: 38 ------SDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVWR 88
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R ++ LL S +V A +G A + L E N +DL++T+
Sbjct: 91 VLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKML----EDLTN-----HIDLVLTE 141
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI +
Sbjct: 142 VVMPCLSGIGLLCKI-------------------------------------------MN 158
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 159 HKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 209
>gi|374333877|ref|YP_005090564.1| signal transduction histidine kinase [Oceanimonas sp. GK1]
gi|372983564|gb|AEX99813.1| signal transduction histidine kinase [Oceanimonas sp. GK1]
Length = 751
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 55/175 (31%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
L+PS E +L V+D+ V+++V LL +VT D G ALQ L EQ
Sbjct: 467 LAPS-MAEASLLLVEDNAVNQEVARALLEKMGLEVTVADGGEAALQ---LCREQ------ 516
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
+ DL++ D MPGM G E +++++ C P
Sbjct: 517 --RFDLVLMDIQMPGMDGMETVRQLR------------------------------CQP- 543
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
+ + L P++ M++ + +RCL G +D++ KPV ++R+
Sbjct: 544 ---------EGAGL---PIIAMTANVMPGERERCLAAGMDDYLSKPVNPEILRRM 586
>gi|356499485|ref|XP_003518570.1| PREDICTED: histidine kinase 2-like [Glycine max]
Length = 1282
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 10/77 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L VDD+ V+R+V + +L KVTAV+SGR AL+ L L + FD +DL
Sbjct: 1141 QILVVDDNAVNRRVAKGVLQKYGAKVTAVESGRAALKMLELP-----HNFDACFMDLQ-- 1193
Query: 91 DYCMPGMTGYELLKKIK 107
MP M G+E +KI+
Sbjct: 1194 ---MPEMDGFEATRKIR 1207
>gi|384427755|ref|YP_005637114.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas campestris pv. raphani 756C]
gi|341936857|gb|AEL06996.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas campestris pv. raphani 756C]
Length = 726
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + KV V+ EQ ++ D +I
Sbjct: 462 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGA-----------EQVLDAMAEEDYDAVI 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM G ++LK+++V Y+ ++V
Sbjct: 511 VDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVL 543
>gi|114048969|ref|YP_739519.1| response regulator receiver protein [Shewanella sp. MR-7]
gi|113890411|gb|ABI44462.1| response regulator receiver protein [Shewanella sp. MR-7]
Length = 265
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRAL 66
A++ L+S D DLS D +V VL VDDS + R VI+R + + ++T + G +A+
Sbjct: 125 ATIDLLSH--DELDLSHFDVHDVRVLVVDDSRMARNVIKRTIGNLGIKQITEAEDGAQAI 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ + N F DLIITDY MP + G L + I+
Sbjct: 183 ELM------RNNMF-----DLIITDYNMPSVDGLALTQFIR 212
>gi|114566147|ref|YP_753301.1| signal transduction histidine kinase-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114337082|gb|ABI67930.1| multi-sensor hybrid histidine kinase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 1442
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 18 DGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI 77
D P++ + VL VDD+ +RK+I L + C V DS +A+ L ++
Sbjct: 1051 DTLPFEPAELKGARVLIVDDNSSNRKIIRTYLEDAQCLVEESDSAEKAITI--LLSASAV 1108
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
F D++I D+ MP M G+EL +K
Sbjct: 1109 KSF-----DVVIVDFQMPAMNGHELAAALK 1133
>gi|390568287|ref|ZP_10248596.1| response regulator receiver protein [Burkholderia terrae BS001]
gi|389939747|gb|EIN01567.1| response regulator receiver protein [Burkholderia terrae BS001]
Length = 699
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L DD+ V+RKV+ R L + + SG AL L + VDL++TD
Sbjct: 461 ILVTDDNEVNRKVLARQLDVLGYRCLVASSGDEALDVLSRE-----------AVDLLVTD 509
Query: 92 YCMPGMTGYELLKKIKVTT 110
MPGM+G EL + ++ T+
Sbjct: 510 LQMPGMSGVELARHVRATS 528
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R ++ LL S +VTAV A + L ++E+S +DL++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRIL--EDEKSC-------IDLVLTE 116
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP +G LL KI + T
Sbjct: 117 VDMPVHSGTGLLSKI-------MSHKT--------------------------------- 136
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL +GA DF+VKP++ +++K + ++ R
Sbjct: 137 ---LKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWR 184
>gi|303247860|ref|ZP_07334128.1| response regulator receiver modulated CheW protein [Desulfovibrio
fructosovorans JJ]
gi|302490761|gb|EFL50662.1| response regulator receiver modulated CheW protein [Desulfovibrio
fructosovorans JJ]
Length = 304
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 18 DGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI 77
DG D+ + + L V+DS + R +I+ L ++ +V G++AL L
Sbjct: 164 DGADMPAPSEKRLRALVVEDSGMMRHMIKGRLEAANFEVVQAGDGQQALDLL-------- 215
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
G DG + D++++D MP M GY L + IK
Sbjct: 216 RGEDGGRFDIVVSDIEMPRMDGYTLTRNIK 245
>gi|443645054|ref|ZP_21128904.1| Two component sensory box histidine kinase/response regulator
[Pseudomonas syringae pv. syringae B64]
gi|443285071|gb|ELS44076.1| Two component sensory box histidine kinase/response regulator
[Pseudomonas syringae pv. syringae B64]
Length = 1209
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
DT +H+L VDD +R V+ R L +VTAV+ G+ AL + +G+
Sbjct: 963 DTRSLHLLVVDDMSANRLVLTRQLEFLGHQVTAVEDGKAALS----------SWCEGV-F 1011
Query: 86 DLIITDYCMPGMTGYELLKKIK 107
D +ITD MPG++GY L + I+
Sbjct: 1012 DAVITDCNMPGISGYALTQAIR 1033
>gi|376007461|ref|ZP_09784656.1| Two-component hybrid sensor and regulator [Arthrospira sp. PCC 8005]
gi|375324097|emb|CCE20409.1| Two-component hybrid sensor and regulator [Arthrospira sp. PCC 8005]
Length = 1336
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 56/206 (27%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
G L+P D + ++ VDD ++ +V+ L + + VT +G AL+ L
Sbjct: 861 GSKLAP-DNNQFKIMIVDDDPINLQVLANYLYLENYAVTQATNGMEALKILE-------- 911
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
G DLI+ D MP MTGYE+ +KI+ P +
Sbjct: 912 --SGFIPDLILLDVMMPRMTGYEVTEKIREDWPPH------------------------- 944
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIK 197
++P+++++++N ++ + LE GA D++ KP+ + + RIK
Sbjct: 945 ------------------QLPIMMLTAKNRISDLVVGLELGANDYLSKPLNKEELLARIK 986
Query: 198 DYLTRDVNLGNEGRGINKRKARESCD 223
++ R L E I K R D
Sbjct: 987 THI-RIKKLRTEKAHIRKTFGRYVTD 1011
>gi|168043876|ref|XP_001774409.1| ETR7 ethylene receptor [Physcomitrella patens subsp. patens]
gi|162674261|gb|EDQ60772.1| ETR7 ethylene receptor [Physcomitrella patens subsp. patens]
gi|163644186|dbj|BAF95743.1| ethylene receptor homolog [Physcomitrella patens]
Length = 763
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
+D V VL DD+ V+R V LLT C+VT V SG LQ + G
Sbjct: 625 TDFSGVKVLVTDDNGVNRMVTRGLLTRLGCEVTVVSSGSECLQVISQ---------PGQN 675
Query: 85 VDLIITDYCMPGMTGYELLKKIK 107
+++ D CMP M GYE+ +I+
Sbjct: 676 FQVLLLDVCMPEMDGYEVAIRIQ 698
>gi|1360642|emb|CAA66459.1| rpfC [Xanthomonas oryzae]
Length = 676
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + +V V+ EQ ++ D +I
Sbjct: 412 MRMLVADDHEANRMVLQRLLEKAGHRVMCVNGA-----------EQVLDAMADEDFDAVI 460
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 461 VDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVL 493
>gi|456864566|gb|EMF82965.1| response regulator receiver domain protein [Leptospira weilii
serovar Topaz str. LT2116]
Length = 257
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 6 GVASLRLISDEIDGFDLSPSDTEEVHV---LAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
G+ L+L+ EI F + E+ V L VDDS ++ ++ ++L + A G
Sbjct: 112 GIEELKLVIKEIIKFSYQKNSIEQRKVGKILIVDDSELNLLLLGKILERNGYSFQAFTEG 171
Query: 63 RRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
++A ++L QS G + I+TD+ MPG +G EL++ I+ F+ + T+I
Sbjct: 172 KKAYEYL-----QSF----GENISYILTDWIMPGFSGQELVEAIRKQEKFDKIPITVITG 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|410699688|gb|AAQ16277.3| histidine kinase rhodopsin 1 [Chlamydomonas reinhardtii]
Length = 1396
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 53/173 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+V VL+VDD V++ VI+ LL ++ G+ AL+ L EE+ + D+I
Sbjct: 674 KVRVLSVDDDPVNQLVIQNLLAPVGYEILQAMDGQEALKVL--TEEERLP-------DVI 724
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+ D MPGM+GYE+ +K++ P
Sbjct: 725 LLDVMMPGMSGYEVCRKLREMYP------------------------------------- 747
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV-KRIKDYL 200
L IPV+++S+++ I L G+ D++VKP ++ RI +L
Sbjct: 748 ------LSCIPVIMISAKSKEEHIVEGLAAGSNDYVVKPFGRQEILARIAAHL 794
>gi|153834472|ref|ZP_01987139.1| CheV [Vibrio harveyi HY01]
gi|156973579|ref|YP_001444486.1| hypothetical protein VIBHAR_01282 [Vibrio harveyi ATCC BAA-1116]
gi|269961594|ref|ZP_06175956.1| chemotaxis protein CheV [Vibrio harveyi 1DA3]
gi|424045222|ref|ZP_17782788.1| response regulator [Vibrio cholerae HENC-03]
gi|148869168|gb|EDL68200.1| CheV [Vibrio harveyi HY01]
gi|156525173|gb|ABU70259.1| hypothetical protein VIBHAR_01282 [Vibrio harveyi ATCC BAA-1116]
gi|269833635|gb|EEZ87732.1| chemotaxis protein CheV [Vibrio harveyi 1DA3]
gi|408886665|gb|EKM25335.1| response regulator [Vibrio cholerae HENC-03]
Length = 308
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRAL-QFLGLDEEQSINGFDGLKVDLIIT 90
VL DDS V RK +ER +T +V +V G+ A + L + +E SI +D ++ L+I+
Sbjct: 184 VLIADDSTVARKQVERAITSIGFEVVSVKDGKEAYNKLLEMAQEGSI--YD--QISLVIS 239
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
D MP M GY L +I+ LY +I+ +L +F
Sbjct: 240 DIEMPEMDGYTLTAEIRRNADLKNLY--VILHSSLSGVF 276
>gi|17232561|ref|NP_489109.1| two-component response regulator [Nostoc sp. PCC 7120]
gi|17134207|dbj|BAB76768.1| two-component response regulator [Nostoc sp. PCC 7120]
Length = 245
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD R I L +S V + G+ AL + + DLI+TD
Sbjct: 23 ILVVDDDLGTRLSISDYLELSGYSVITANDGQEALTMV-----------EAYHPDLIVTD 71
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
MP M GYEL+++++ PF L
Sbjct: 72 IVMPRMNGYELVRRVRQQPPFRLL 95
>gi|428316305|ref|YP_007114187.1| CheA signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
gi|428239985|gb|AFZ05771.1| CheA signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
Length = 936
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 21 DLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGF 80
++ PS ++ +L VDDS+ R+++ LT + +V G AL+ L
Sbjct: 804 EIPPSSSKSPQILVVDDSYTIRQLLSLTLTRARYRVVQAKDGLDALEKLQ---------- 853
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIKVTTPF 112
+GL L I D MP M G+ELL+ I+ T F
Sbjct: 854 NGLDCSLAIVDIEMPRMDGFELLRSIRSTERF 885
>gi|402849616|ref|ZP_10897844.1| two-component hybrid sensor and regulator [Rhodovulum sp. PH10]
gi|402500093|gb|EJW11777.1| two-component hybrid sensor and regulator [Rhodovulum sp. PH10]
Length = 806
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L VDD + R +L+ +V SG +AL LG E DL+I
Sbjct: 675 VFILLVDDEPLVRATTVAMLSDLGHRVLEAGSGAQALDLLGAGESP----------DLVI 724
Query: 90 TDYCMPGMTGYELLKKIKVTTP 111
TDY MP MTG EL ++I+ P
Sbjct: 725 TDYLMPAMTGAELAREIRARKP 746
>gi|367469501|ref|ZP_09469252.1| PAS/PAC sensor hybrid histidine kinase [Patulibacter sp. I11]
gi|365815424|gb|EHN10571.1| PAS/PAC sensor hybrid histidine kinase [Patulibacter sp. I11]
Length = 541
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L V+D R++ R+L + +V AVD+G AL+ L ++ VDL++TD
Sbjct: 413 ILLVEDEPSGRRIARRILERAGYRVIAVDAGAAALEVLAGEDH---------AVDLLLTD 463
Query: 92 YCMPGMTGYELLKKI 106
MPGM G EL ++
Sbjct: 464 VIMPGMLGTELADRV 478
>gi|372488541|ref|YP_005028106.1| diguanylate cyclase domain-containing protein [Dechlorosoma suillum
PS]
gi|359355094|gb|AEV26265.1| diguanylate cyclase (GGDEF) domain-containing protein [Dechlorosoma
suillum PS]
Length = 846
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 15 DEIDGFDLS-PSDTEEVHVLAVDDSFVDRKVI-----ERLLTISSCKVTAVDSGRRALQF 68
DEI G+ S P EE+ ++ + + +I +R L + + + + +R L+
Sbjct: 544 DEIQGYYFSRPVPAEEMEIMLENGKTIPEDLIHPRERKRTLLLVDDEENILSAMKRLLRK 603
Query: 69 LGLDEEQSINGFDGLK------VDLIITDYCMPGMTGYELLKKIKVTTP 111
G D + G +GLK VD+II+D MPGMTG E L++ KV P
Sbjct: 604 EGYDIRIASGGEEGLKLLAEHPVDVIISDQRMPGMTGVEFLRRAKVLHP 652
>gi|95931065|ref|ZP_01313792.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfuromonas acetoxidans DSM 684]
gi|95132874|gb|EAT14546.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfuromonas acetoxidans DSM 684]
Length = 471
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V R+ ++R+L +V SG AL+ + +D+ ++I+D
Sbjct: 6 ILVVDDEAVIREAVKRILEQEGYEVITATSGHTALEKVQIDD-----------FTVVISD 54
Query: 92 YCMPGMTGYELLKKIKVTTP 111
MPGM G E+LK IK+ P
Sbjct: 55 LKMPGMGGMEVLKSIKILQP 74
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R ++ LL S +VTAV A + L ++E+S +DL++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRIL--EDEKSC-------IDLVLTE 116
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP +G LL KI + T
Sbjct: 117 VDMPVHSGTGLLSKI-------MSHKT--------------------------------- 136
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL +GA DF+VKP++ +++K + ++ R
Sbjct: 137 ---LKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWR 184
>gi|418937798|ref|ZP_13491394.1| response regulator receiver protein [Rhizobium sp. PDO1-076]
gi|375055482|gb|EHS51734.1| response regulator receiver protein [Rhizobium sp. PDO1-076]
Length = 296
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD+ V+R+++ L+I AV+ G AL+ L ++ N GL +D++I D
Sbjct: 1 MLVVDDNAVNRRIVTEQLSIWGFDGLAVEDGETALKILA----EAFN--TGLHIDVVIID 54
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
Y MP M G ++ + I+ F+ L
Sbjct: 55 YHMPVMNGIDVARAIRSDGRFDDL 78
>gi|260775691|ref|ZP_05884587.1| diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with
PAS/PAC sensor(s) [Vibrio coralliilyticus ATCC BAA-450]
gi|260608107|gb|EEX34276.1| diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with
PAS/PAC sensor(s) [Vibrio coralliilyticus ATCC BAA-450]
Length = 541
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD R + R L V ++ +AL+ L D +DLIITD
Sbjct: 6 ILIVDDEMSIRNALRRELRFKVATVHTAENAAQALEVL-----------DAHHIDLIITD 54
Query: 92 YCMPGMTGYELLKKIKVTTP 111
Y MP MTG ELL ++K P
Sbjct: 55 YRMPRMTGTELLLEVKQRHP 74
>gi|113968893|ref|YP_732686.1| response regulator receiver protein [Shewanella sp. MR-4]
gi|113883577|gb|ABI37629.1| response regulator receiver protein [Shewanella sp. MR-4]
Length = 265
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRAL 66
A++ L+S D DLS D +V VL VDDS + R VI+R + + ++T + G +A+
Sbjct: 125 ATIDLLSH--DELDLSHFDVHDVRVLVVDDSRMARNVIKRTIGNLGIKQITEAEDGAQAI 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ + N F DLIITDY MP + G L + I+
Sbjct: 183 ELM------RNNMF-----DLIITDYNMPSVDGLALTQFIR 212
>gi|188575996|ref|YP_001912925.1| two component sensor-regulator hybrid protein RpfC [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188520448|gb|ACD58393.1| two component sensor-regulator hybrid protein RpfC [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 718
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + +V V+ EQ ++ D +I
Sbjct: 454 MRMLVADDHEANRMVLQRLLEKAGHRVMCVNGA-----------EQVLDAMADEDFDAVI 502
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 503 VDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVL 535
>gi|86158766|ref|YP_465551.1| response regulator receiver domain-containing protein
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85775277|gb|ABC82114.1| response regulator receiver domain protein (CheY-like)
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 135
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL V+D +R+++ +LT S C V + SG+ L+ L E SI D+++
Sbjct: 14 VRVLLVEDDDDNRELMAEVLTASGCLVLSAASGQEGLKTL---SEHSI--------DVVV 62
Query: 90 TDYCMPGMTGYELLKKIKVTTP 111
TD MPGM G E+ + K P
Sbjct: 63 TDVGMPGMGGLEMARAAKAIAP 84
>gi|16124976|ref|NP_419540.1| sensor histidine kinase / response regulator [Caulobacter
crescentus CB15]
gi|13421950|gb|AAK22708.1| sensor histidine kinase / response regulator [Caulobacter
crescentus CB15]
Length = 591
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
S + +L VDD V+RKVI +L C++ D+G+RAL L E
Sbjct: 467 SGEHPLRLLVVDDYAVNRKVIAMMLAPLGCEIVEADNGQRALDLLAERE----------- 515
Query: 85 VDLIITDYCMPGMTGYELLKKIKV 108
VD ++ D+ MP M G E ++++
Sbjct: 516 VDAVLLDFNMPVMGGLETTRRLRA 539
>gi|189502365|ref|YP_001958082.1| hypothetical protein Aasi_0999 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497806|gb|ACE06353.1| hypothetical protein Aasi_0999 [Candidatus Amoebophilus asiaticus
5a2]
Length = 2272
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG-LDEEQSINGFDGLKVDLII 89
H+L V+D+ V++K++ R L + T D+G++A++ +G L+E ++ ++ DLI+
Sbjct: 2122 HILVVEDNIVNQKILRRQLEAAGYTCTVADNGQKAIEAIGALEEVETSEQWNLAAFDLIL 2181
Query: 90 TDYCMPGMTGYELLKKIK 107
D MP M G E + I+
Sbjct: 2182 MDLEMPVMGGLEATEWIR 2199
>gi|117928992|ref|YP_873543.1| response regulator receiver protein [Acidothermus cellulolyticus
11B]
gi|117649455|gb|ABK53557.1| response regulator receiver protein [Acidothermus cellulolyticus
11B]
Length = 120
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L VDDS R++IER+L ++ + A++ L EQ DLI+
Sbjct: 1 MRILVVDDSRAMRRIIERMLVLAGYDHHDIVHAADAVEATRLMAEQ--------PPDLIL 52
Query: 90 TDYCMPGMTGYELLKKIK---VTTPFNFLYS 117
D+ MPG G E L I+ TTPF F+ S
Sbjct: 53 CDWNMPGTNGLEFLTAIRRAGWTTPFGFITS 83
>gi|58582493|ref|YP_201509.1| RpfC protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84624381|ref|YP_451753.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427087|gb|AAW76124.1| RpfC protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368321|dbj|BAE69479.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 725
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + +V V+ EQ ++ D +I
Sbjct: 461 MRMLVADDHEANRMVLQRLLEKAGHRVMCVNGA-----------EQVLDAMADEDFDAVI 509
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 510 VDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVL 542
>gi|254409963|ref|ZP_05023743.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196182999|gb|EDX77983.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 1525
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V+R+++ L++ + ++ +GR AL + +G + DLI+ D
Sbjct: 979 ILIVDDDTVNRQILVNYLSLENYQLAQAANGREALDIIN----------NGFQPDLILLD 1028
Query: 92 YCMPGMTGYELLKKIKVTTP 111
MP MTGY++ KK++ P
Sbjct: 1029 AIMPRMTGYDVCKKLREFYP 1048
>gi|183220358|ref|YP_001838354.1| putative two-component response regulator [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910473|ref|YP_001962028.1| two component response regulator sensor histidine kinase/response
regulator subunits [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775149|gb|ABZ93450.1| Sensor histidine kinase and response regulator of a two component
complex [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778780|gb|ABZ97078.1| Putative two-component response regulator; putative membrane
protein; putative signal peptide [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 1065
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 54/174 (31%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
++ V+ VDD ++R+V++ LT+ C+V +G A++ + D +L+
Sbjct: 692 KLRVIVVDDEPINRQVLKNHLTLIGCEVREAANGVDAIRLVR----------DEGPFELM 741
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+ D MPGM+GY+ +C
Sbjct: 742 VLDIMMPGMSGYD---------------------------------VCTVL--------- 759
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDYLT 201
++S +L ++P++ ++++N +A I LE G D++ KP K + R K+ +T
Sbjct: 760 -RESYSLYQLPILFLTAKNQIADIIAALEAGGNDYLAKPFDKRELISRAKNLIT 812
>gi|384419210|ref|YP_005628570.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462123|gb|AEQ96402.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas oryzae pv. oryzicola BLS256]
Length = 725
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + +V V+ EQ ++ D +I
Sbjct: 461 MRMLVADDHEANRMVLQRLLEKAGHRVMCVNGA-----------EQVLDAMADEDFDAVI 509
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPGM+G ++LK+++V Y+ ++V
Sbjct: 510 VDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVL 542
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V ++G +A +L + QS +DL++
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQS-------NIDLVL 85
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 86 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 109
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS N + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 110 -------KDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 156
>gi|253699327|ref|YP_003020516.1| Fis family transcriptional regulator [Geobacter sp. M21]
gi|251774177|gb|ACT16758.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter sp. M21]
Length = 469
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+++L VDD V R + R+L S V SG A++ L E DLII
Sbjct: 1 MNILVVDDESVIRDGLARILEGDSFTVDTAKSGHVAIEHLQQKE-----------FDLII 49
Query: 90 TDYCMPGMTGYELLKKIKVTTP 111
TD MPGM+G+E+L +K P
Sbjct: 50 TDLKMPGMSGFEVLAAVKTLQP 71
>gi|160877046|ref|YP_001556362.1| response regulator receiver protein [Shewanella baltica OS195]
gi|378710261|ref|YP_005275155.1| response regulator receiver protein [Shewanella baltica OS678]
gi|418022379|ref|ZP_12661366.1| response regulator receiver protein [Shewanella baltica OS625]
gi|160862568|gb|ABX51102.1| response regulator receiver protein [Shewanella baltica OS195]
gi|315269250|gb|ADT96103.1| response regulator receiver protein [Shewanella baltica OS678]
gi|353538604|gb|EHC08159.1| response regulator receiver protein [Shewanella baltica OS625]
Length = 265
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCK-VTAVDSGRRAL 66
A++ L+S D DLS D ++V VL VDDS + R VI+R + K +T + G +A+
Sbjct: 125 ATIDLLSH--DELDLSNFDVQDVRVLVVDDSRMARNVIKRTIGNLGMKLITEAEDGAQAI 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ + N F DL+ITDY MP + G L + I+
Sbjct: 183 ELM------KNNMF-----DLVITDYNMPSVDGLALTQYIR 212
>gi|334119878|ref|ZP_08493962.1| two component transcriptional regulator, LuxR family [Microcoleus
vaginatus FGP-2]
gi|333457519|gb|EGK86142.1| two component transcriptional regulator, LuxR family [Microcoleus
vaginatus FGP-2]
Length = 244
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L DD F R I L I+ V A ++G+ AL + D + LI+TD
Sbjct: 5 ILVADDDFATRLSITDYLEITGYSVIAAENGKEALGLV-----------DEFQPHLIVTD 53
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
MP M GYE +++++ F L
Sbjct: 54 ITMPEMDGYEFVRRVRTRPAFRLL 77
>gi|77360565|ref|YP_340140.1| sensor protein [Pseudoalteromonas haloplanktis TAC125]
gi|76875476|emb|CAI86697.1| putative sensor protein [Pseudoalteromonas haloplanktis TAC125]
Length = 1019
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 48/165 (29%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
+D HVL VDD+ ++ +V + +L + K+T G AL+ L +++Q N
Sbjct: 890 ADLSAYHVLLVDDNMINIEVAKAILKHTKVKITCASDGLEALEALKSNKQQPFN------ 943
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
+I+ D MP + GY+ +I+ N + +I
Sbjct: 944 --VILMDCQMPNLNGYDTTSEIR----------------NAKAGIEYI------------ 973
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
+P++ M++ + +RCL G D+I KP+K
Sbjct: 974 ------------HVPIIAMTASAMEGDRERCLTAGMNDYITKPIK 1006
>gi|423063221|ref|ZP_17052011.1| multi-sensor hybrid histidine kinase [Arthrospira platensis C1]
gi|406715343|gb|EKD10499.1| multi-sensor hybrid histidine kinase [Arthrospira platensis C1]
Length = 1338
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 56/206 (27%)
Query: 19 GFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
G L+P D + ++ VDD ++ +V+ L + + VT +G AL+ L
Sbjct: 863 GSKLAP-DNNQFKIMIVDDDPINLQVLANYLYLENYAVTQATNGMEALKILE-------- 913
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFC 138
G DLI+ D MP MTGYE+ +KI+ P +
Sbjct: 914 --SGFIPDLILLDVMMPRMTGYEVTEKIREDWPPH------------------------- 946
Query: 139 FPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIK 197
++P+++++++N ++ + LE GA D++ KP+ + + RIK
Sbjct: 947 ------------------QLPIMMLTAKNRISDLVVGLELGANDYLSKPLNKEELLARIK 988
Query: 198 DYLTRDVNLGNEGRGINKRKARESCD 223
++ R L E I K R D
Sbjct: 989 THI-RIKKLRTEKAHIRKTFGRYVTD 1013
>gi|126172757|ref|YP_001048906.1| response regulator receiver protein [Shewanella baltica OS155]
gi|153002322|ref|YP_001368003.1| response regulator receiver protein [Shewanella baltica OS185]
gi|217974910|ref|YP_002359661.1| response regulator receiver protein [Shewanella baltica OS223]
gi|373948001|ref|ZP_09607962.1| response regulator receiver protein [Shewanella baltica OS183]
gi|386326153|ref|YP_006022270.1| response regulator receiver protein [Shewanella baltica BA175]
gi|386339530|ref|YP_006035896.1| response regulator receiver protein [Shewanella baltica OS117]
gi|125995962|gb|ABN60037.1| response regulator receiver protein [Shewanella baltica OS155]
gi|151366940|gb|ABS09940.1| response regulator receiver protein [Shewanella baltica OS185]
gi|217500045|gb|ACK48238.1| response regulator receiver protein [Shewanella baltica OS223]
gi|333820298|gb|AEG12964.1| response regulator receiver protein [Shewanella baltica BA175]
gi|334861931|gb|AEH12402.1| response regulator receiver protein [Shewanella baltica OS117]
gi|373884601|gb|EHQ13493.1| response regulator receiver protein [Shewanella baltica OS183]
Length = 265
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCK-VTAVDSGRRAL 66
A++ L+S D DLS D ++V VL VDDS + R VI+R + K +T + G +A+
Sbjct: 125 ATIDLLSH--DELDLSNFDVQDVRVLVVDDSRMARNVIKRTIGNLGMKLITEAEDGAQAI 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ + N F DL+ITDY MP + G L + I+
Sbjct: 183 ELM------KNNMF-----DLVITDYNMPSVDGLALTQYIR 212
>gi|15614110|ref|NP_242413.1| hypothetical protein BH1547 [Bacillus halodurans C-125]
gi|10174164|dbj|BAB05266.1| BH1547 [Bacillus halodurans C-125]
Length = 661
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 55/167 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V+ KVI +L + +V V SG E++I D + DL++ D
Sbjct: 332 ILVVDDEPVNLKVIASILANEAYEVKTVISG-----------EEAIAVLDTKEWDLVVAD 380
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M+GYEL K I+
Sbjct: 381 VMMPKMSGYELTKNIR-------------------------------------------Q 397
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIK 197
L E+P++++++ + I+ GA D++ KPV L +++ RIK
Sbjct: 398 RFTLTELPILLITARSRPEDIENGFRAGANDYLTKPVNLLELRARIK 444
>gi|367028332|ref|XP_003663450.1| hypothetical protein MYCTH_2305403 [Myceliophthora thermophila ATCC
42464]
gi|347010719|gb|AEO58205.1| hypothetical protein MYCTH_2305403 [Myceliophthora thermophila ATCC
42464]
Length = 371
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 30 VHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFL-GLDEEQSINGFDGLKVDL 87
+HVL DD ++ V LLT + +VT V G+ AL FL E++S K D+
Sbjct: 214 IHVLFADDDASNQTVARNLLTHLGFSQVTTVRDGKEALDFLLAAAEDKSQR-----KPDI 268
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTI-IVFLNLQNLFL------FILSICFCFP 140
I D MP M G+E + ++ P+N YS I IV + +N L F + P
Sbjct: 269 IFLDTEMPVMDGFECARILRREFPYNTDYSNIPIVGMAYRNPMLENRERWFAAGMSGFLP 328
Query: 141 FFFPSNNLEQ 150
+LEQ
Sbjct: 329 LPIQERDLEQ 338
>gi|376295960|ref|YP_005167190.1| two component Fis family sigma54-specific transcriptional regulator
[Desulfovibrio desulfuricans ND132]
gi|323458521|gb|EGB14386.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio desulfuricans ND132]
Length = 443
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 56/163 (34%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L ++D + R+ + +LT S +VTA+ S E+ + D + DL+ITD
Sbjct: 6 ILVIEDERIARENLTHVLTGSGYEVTAIASA-----------EEGLRELDKKEFDLVITD 54
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+PGM G ++L+ I+ P
Sbjct: 55 LMLPGMDGIQILEHIRAHHPLTI------------------------------------- 77
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK 194
V++++ +A + ++ GA +I KP+KL +++
Sbjct: 78 --------VIVVTGHATVANAVKAMQKGAHSYIAKPLKLDELR 112
>gi|392532646|ref|ZP_10279783.1| sensor protein [Pseudoalteromonas arctica A 37-1-2]
Length = 1012
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 50/165 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D H+L VDD+ ++ +V + +L + K+T G AL+ L + EQ+
Sbjct: 884 DLSAYHILLVDDNMINIEVAKAILKRTKVKITCASDGVEALEALRENTEQAF-------- 935
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTP-FNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
D+I+ D MP + GY+ +I+ + ++ Y
Sbjct: 936 DVILMDCQMPNLNGYDTTSEIRNSKAGVDYTY---------------------------- 967
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVK 189
IP++ M++ + +RCL G D+I KP+K
Sbjct: 968 -------------IPIIAMTASAMEGDRERCLTAGMNDYITKPIK 999
>gi|388602940|ref|ZP_10161336.1| hypothetical protein VcamD_24009 [Vibrio campbellii DS40M4]
Length = 308
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRAL-QFLGLDEEQSINGFDGLKVDLIIT 90
VL DDS V RK +ER +T +V +V G+ A + L + +E SI +D ++ L+I+
Sbjct: 184 VLIADDSTVARKQVERAVTSIGFEVVSVKDGKEAYNKLLEMAQEGSI--YD--QISLVIS 239
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
D MP M GY L +I+ LY +I+ +L +F
Sbjct: 240 DIEMPEMDGYTLTAEIRRNADLKNLY--VILHSSLSGVF 276
>gi|251794919|ref|YP_003009650.1| signal transduction histidine kinase LytS [Paenibacillus sp. JDR-2]
gi|247542545|gb|ACS99563.1| signal transduction histidine kinase, LytS [Paenibacillus sp.
JDR-2]
Length = 1112
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 52/161 (32%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
T EV +L VDD + KV++ L S V +G AL+ + + +
Sbjct: 768 TGEVKILLVDDDSSNIKVLQELFPSSRYHVFVAYNGEDALKLIKQHRGE---------LS 818
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
L++ D MPG++GYE+ ++I+ P
Sbjct: 819 LVLLDVMMPGLSGYEVCRRIREENP----------------------------------- 843
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
L ++PV++++ N A I E GA DF+VKP
Sbjct: 844 --------LYQLPVLLLTVRNSPADIALGFEAGANDFLVKP 876
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 52/175 (29%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V+ R++I LL S +V AV G A + L +DLI+T+
Sbjct: 46 VLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGGPH---------NIDLILTE 96
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+P ++GY LL T++ +
Sbjct: 97 VELPLISGYALL--------------TLVT-----------------------------E 113
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTRDVNL 206
+ + IPV++MSS++ ++ + +C+ GA DF++KPV+ ++++ + ++ R L
Sbjct: 114 HAVCKNIPVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELRNLWQHVWRRQTL 168
>gi|167746502|ref|ZP_02418629.1| hypothetical protein ANACAC_01212 [Anaerostipes caccae DSM 14662]
gi|167653462|gb|EDR97591.1| response regulator receiver domain protein [Anaerostipes caccae DSM
14662]
Length = 635
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L +D+ ++R++ L+ +S +VTAV++G AL N D DLI+
Sbjct: 513 HILIAEDNEINREIAVELVAMSGAEVTAVENGEEALNIF--------NASDPGFFDLILM 564
Query: 91 DYCMPGMTGYELLKKIK 107
D MP + GYE +KI+
Sbjct: 565 DIQMPVLDGYEAARKIR 581
>gi|108758095|ref|YP_633648.1| response regulator [Myxococcus xanthus DK 1622]
gi|108461975|gb|ABF87160.1| response regulator [Myxococcus xanthus DK 1622]
Length = 231
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD + ++RLL +V +G AL+ L +G D+++TD
Sbjct: 6 VLVVDDEQPIARALQRLLKREGFEVQIAFNGNEALERL-----------EGFSPDIVLTD 54
Query: 92 YCMPGMTGYELLKKIKVTTPF 112
+ MPGMTG ELL+++K + P
Sbjct: 55 FRMPGMTGSELLQRLKRSHPL 75
>gi|408420706|ref|YP_006762120.1| two component system sensor histidine kinase, hybrid [Desulfobacula
toluolica Tol2]
gi|405107919|emb|CCK81416.1| two component system sensor histidine kinase, hybrid [Desulfobacula
toluolica Tol2]
Length = 1164
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P D + VL VDD+ R++I ++ KV SG +AL L E N +
Sbjct: 663 PKDLRGLSVLVVDDNQAAREIISEIIVSFQMKVETASSGEQALFML----ENGNNTY--- 715
Query: 84 KVDLIITDYCMPGMTGYELLKKIK 107
DLI+ D+ MPGM G E ++IK
Sbjct: 716 --DLILLDWKMPGMNGIETARQIK 737
>gi|317471316|ref|ZP_07930675.1| response regulator receiver domain-containing protein [Anaerostipes
sp. 3_2_56FAA]
gi|316901209|gb|EFV23164.1| response regulator receiver domain-containing protein [Anaerostipes
sp. 3_2_56FAA]
Length = 640
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+L +D+ ++R++ L+ +S +VTAV++G AL N D DLI+
Sbjct: 518 HILIAEDNEINREIAVELVAMSGAEVTAVENGEEALNIF--------NASDPGFFDLILM 569
Query: 91 DYCMPGMTGYELLKKIK 107
D MP + GYE +KI+
Sbjct: 570 DIQMPVLDGYEAARKIR 586
>gi|159487203|ref|XP_001701623.1| chlamyopsin-5 sensory rhodopsin [Chlamydomonas reinhardtii]
gi|158280842|gb|EDP06598.1| chlamyopsin-5 sensory rhodopsin [Chlamydomonas reinhardtii]
Length = 1441
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 53/173 (30%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+V VL+VDD V++ VI+ LL ++ G+ AL+ L EE+ + D+I
Sbjct: 719 KVRVLSVDDDPVNQLVIQNLLAPVGYEILQAMDGQEALKVL--TEEERLP-------DVI 769
Query: 89 ITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
+ D MPGM+GYE+ +K++ P
Sbjct: 770 LLDVMMPGMSGYEVCRKLREMYP------------------------------------- 792
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV-KRIKDYL 200
L IPV+++S+++ I L G+ D++VKP ++ RI +L
Sbjct: 793 ------LSCIPVIMISAKSKEEHIVEGLAAGSNDYVVKPFGRQEILARIAAHL 839
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V ++G +A +L + QS +DL++
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQS-------NIDLVL 85
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 86 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 109
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS N + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 110 -------KDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 156
>gi|440679978|ref|YP_007154773.1| two component transcriptional regulator, LuxR family [Anabaena
cylindrica PCC 7122]
gi|428677097|gb|AFZ55863.1| two component transcriptional regulator, LuxR family [Anabaena
cylindrica PCC 7122]
Length = 227
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD R I L +S V D G+ AL + +E Q DLI+TD
Sbjct: 5 ILVVDDDLGTRLSISDYLELSGYAVIMADDGQEALAMV--EENQP---------DLIVTD 53
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
MP M GYEL+++++ + F L
Sbjct: 54 IVMPRMNGYELVRRVRKQSEFRLL 77
>gi|291278597|ref|YP_003495432.1| hypothetical protein DEFDS_0164 [Deferribacter desulfuricans SSM1]
gi|290753299|dbj|BAI79676.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 775
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 54/156 (34%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDDS RK ++ +LT + KV G +AL+ L L+ +V IITD
Sbjct: 654 VLIVDDSISVRKYLKDILTKNGYKVLEAKDGLQALETLELN-----------RVPYIITD 702
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP + GYEL+ KI+ NN+ QD
Sbjct: 703 LEMPNLNGYELIDKIR--------------------------------------NNI-QD 723
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
S + + +++S + LE GA+ FIVKP
Sbjct: 724 KS----VKIYVITSRGTEKHRSKALELGADGFIVKP 755
>gi|218887100|ref|YP_002436421.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758054|gb|ACL08953.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 126
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
P DT + VL VDD R++I+ +L + V D G A + L D
Sbjct: 2 PYDTN-MRVLVVDDFSTMRRIIKNILRQLGFTNVVEADDGTTAWEILNKD---------- 50
Query: 83 LKVDLIITDYCMPGMTGYELLKKIKVTTPF 112
+++ +I+D+ MP MTG ELL+K++ + F
Sbjct: 51 -RIEFVISDWNMPQMTGIELLRKVRASEEF 79
>gi|70728487|ref|YP_258236.1| sensory box histidine kinase/response regulator [Pseudomonas
protegens Pf-5]
gi|68342786|gb|AAY90392.1| sensory box histidine kinase/response regulator [Pseudomonas
protegens Pf-5]
Length = 1200
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 7 VASLRLISDEI-DGFDLSPSDTEE------VHVLAVDDSFVDRKVIERLLTISSCKVTAV 59
V SL L + + D F+ P+ T+E + VL VDD +R V+ + L +V A
Sbjct: 937 VVSLELYLERVSDDFESGPASTQERPPSRSMEVLVVDDLSANRMVLCQQLMFLGHRVVAC 996
Query: 60 DSGRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
D+ R ALQ + G D+++TD MP M+GY L + I+
Sbjct: 997 DNAREALQ-----------QWRGGTFDVVMTDCNMPDMSGYALAEAIR 1033
>gi|315127117|ref|YP_004069120.1| signal transduction histidine kinase two-component system with
Protein-glutamate methylesterase domain
[Pseudoalteromonas sp. SM9913]
gi|315015631|gb|ADT68969.1| putative signal transduction histidine kinase two-component system
with Protein-glutamate methylesterase domain
[Pseudoalteromonas sp. SM9913]
Length = 918
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 52/162 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L V+D+ ++R+VI ++L + +T + G +AL+ L + QS DLI+ D
Sbjct: 800 ILLVEDNAINRQVIAKMLEPTKASLTMAEDGLKALEVL---KSQSF--------DLILMD 848
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M GYE + I+ T +
Sbjct: 849 CQMPNMDGYECTRAIRTT----------------------------------------EI 868
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
+ LR +P+V +++ RCL G +DFI KP+ D+
Sbjct: 869 KTGLR-VPIVAITANAYEEDKQRCLIVGMDDFIAKPINSDDL 909
>gi|254477960|ref|ZP_05091345.1| sensor histidine kinase/response regulator [Ruegeria sp. R11]
gi|214028545|gb|EEB69381.1| sensor histidine kinase/response regulator [Ruegeria sp. R11]
Length = 760
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E ++VL VDD ++R ++ L AV SG AL+ L LD +G D+
Sbjct: 481 EGLNVLVVDDLELNRIILNERLDTWGVNTVAVASGDAALETL-LDARH-----EGRSFDI 534
Query: 88 IITDYCMPGMTGYELLKKIK 107
I+ D+ MPGM G+EL ++I+
Sbjct: 535 ILQDFQMPGMDGHELARRIR 554
>gi|197121933|ref|YP_002133884.1| response regulator receiver protein [Anaeromyxobacter sp. K]
gi|220916726|ref|YP_002492030.1| response regulator receiver protein [Anaeromyxobacter dehalogenans
2CP-1]
gi|196171782|gb|ACG72755.1| response regulator receiver protein [Anaeromyxobacter sp. K]
gi|219954580|gb|ACL64964.1| response regulator receiver protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 127
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V VL V+D +R+++ +LT S C V + SG+ L+ L E SI D+++
Sbjct: 6 VRVLLVEDDDDNRELMAEVLTASGCLVLSAASGQEGLKTL---SEHSI--------DVVV 54
Query: 90 TDYCMPGMTGYELLKKIKVTTP 111
TD MPGM G E+ + K P
Sbjct: 55 TDVGMPGMGGLEMARAAKAIAP 76
>gi|221233697|ref|YP_002516133.1| two component sensor histidine kinase [Caulobacter crescentus
NA1000]
gi|220962869|gb|ACL94225.1| two component sensor histidine kinase [Caulobacter crescentus
NA1000]
Length = 566
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
S + +L VDD V+RKVI +L C++ D+G+RAL L E
Sbjct: 442 SGEHPLRLLVVDDYAVNRKVIAMMLAPLGCEIVEADNGQRALDLLAERE----------- 490
Query: 85 VDLIITDYCMPGMTGYELLKKIK 107
VD ++ D+ MP M G E ++++
Sbjct: 491 VDAVLLDFNMPVMGGLETTRRLR 513
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLSRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|424871123|ref|ZP_18294785.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393166824|gb|EJC66871.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 276
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ +SG +AL+ L + + + L+IT
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKANRD----------IGLVIT 192
Query: 91 DYCMPGMTGYELLKKIKVT 109
DY MP + G+EL ++I+ +
Sbjct: 193 DYNMPDIDGFELTRRIRAS 211
>gi|359440992|ref|ZP_09230900.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20429]
gi|392533411|ref|ZP_10280548.1| two-component response regulator [Pseudoalteromonas arctica A
37-1-2]
gi|358037189|dbj|GAA67149.1| two-component system, cell cycle response regulator
[Pseudoalteromonas sp. BSi20429]
Length = 299
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 71/175 (40%), Gaps = 56/175 (32%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
++ VL VDD ++R V+E+ L + V V+SG +AL F+ +VD
Sbjct: 2 SKRAKVLIVDDDPINRLVLEKTLKVEH-DVFLVESGEKALTFV-----------KTAQVD 49
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LII D MPG+ GYE+L ++K P I P F S
Sbjct: 50 LIILDVIMPGIDGYEVLVQLK-ENP-----------------------ITQSIPVIFISA 85
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
N D A + LE GA D+I KP S V+ R+++ L
Sbjct: 86 NRSHDDEA-------------------KGLELGAMDYITKPFSPSIVRVRVRNQL 121
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|424882057|ref|ZP_18305689.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518420|gb|EIW43152.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium leguminosarum bv. trifolii WU95]
Length = 276
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ +SG +AL+ L + + + L+IT
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKANRD----------IGLVIT 192
Query: 91 DYCMPGMTGYELLKKIKVT 109
DY MP + G+EL ++I+ +
Sbjct: 193 DYNMPDIDGFELTRRIRAS 211
>gi|257094985|ref|YP_003168626.1| response regulator receiver protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047509|gb|ACV36697.1| response regulator receiver protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 122
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 72 DEEQSINGFD-GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
+ E+++ F G+KVDL+ITD MPGM G EL+KK++ + FL
Sbjct: 34 NAEEALKKFSAGVKVDLLITDLNMPGMNGIELIKKVRALPAYRFL 78
>gi|409438987|ref|ZP_11266050.1| Response regulator receiver protein [Rhizobium mesoamericanum
STM3625]
gi|408749647|emb|CCM77228.1| Response regulator receiver protein [Rhizobium mesoamericanum
STM3625]
Length = 268
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ DSG +AL+ L + + + L+IT
Sbjct: 135 HVLIVDDSPTARALLSSRLKRYNFRVSTADSGAKALEILKANRD----------IGLMIT 184
Query: 91 DYCMPGMTGYELLKKIKVT 109
DY MP + G+EL ++I+ +
Sbjct: 185 DYNMPDIDGFELTRRIRAS 203
>gi|338536628|ref|YP_004669962.1| response regulator [Myxococcus fulvus HW-1]
gi|337262724|gb|AEI68884.1| response regulator [Myxococcus fulvus HW-1]
Length = 231
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD + ++RLL +V SG AL+ L + D+++TD
Sbjct: 6 VLVVDDEQPIARALQRLLKREGFEVQIAFSGNEALERL-----------EAFSPDIVLTD 54
Query: 92 YCMPGMTGYELLKKIKVTTPF 112
+ MPGMTG ELL++IK + P
Sbjct: 55 FRMPGMTGSELLQRIKRSHPL 75
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R+V+ LL +V ++G A ++L E+ N +DL++T+
Sbjct: 85 VLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL---EDLQNN------IDLVLTE 135
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP ++G LL KI IC
Sbjct: 136 VFMPCLSGIGLLSKITSHK------------------------IC--------------- 156
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MS+ + ++ + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 157 ----KDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWR 203
>gi|241205123|ref|YP_002976219.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859013|gb|ACS56680.1| response regulator receiver protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 276
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ +SG +AL+ L + + + L+IT
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKANRD----------IGLVIT 192
Query: 91 DYCMPGMTGYELLKKIKVT 109
DY MP + G+EL ++I+ +
Sbjct: 193 DYNMPDIDGFELTRRIRAS 211
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|414561784|ref|NP_716185.2| two component signal transduction system response regulator
[Shewanella oneidensis MR-1]
gi|410519529|gb|AAN53630.2| two component signal transduction system response regulator
[Shewanella oneidensis MR-1]
Length = 265
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCK-VTAVDSGRRAL 66
A++ L+S D DLS D +V VL VDDS + R VI+R + K +T + G +A+
Sbjct: 125 ATIDLLSH--DELDLSHFDVHDVRVLVVDDSRMARNVIKRTIGNLGIKLITEAEDGAQAI 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ + N F DLIITDY MP + G L + I+
Sbjct: 183 ELM------RHNMF-----DLIITDYNMPSVDGLALTQFIR 212
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|218194915|gb|EEC77342.1| hypothetical protein OsI_16022 [Oryza sativa Indica Group]
Length = 65
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 43/90 (47%)
Query: 85 VDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
+D+++TDYCMP MTGYELLK IK +P
Sbjct: 19 IDMVLTDYCMPEMTGYELLKAIKALSP--------------------------------- 45
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDR 174
L+ IPV++MSSEN RI R
Sbjct: 46 ----------LKPIPVIVMSSENEPQRISR 65
>gi|399035550|ref|ZP_10732965.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF122]
gi|398066681|gb|EJL58240.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Rhizobium sp. CF122]
Length = 276
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ DSG +AL+ L + + + L+IT
Sbjct: 143 HVLIVDDSPTARALLSSRLKRYNFRVSTADSGAKALEILKANRD----------IGLMIT 192
Query: 91 DYCMPGMTGYELLKKIKVT 109
DY MP + G+EL ++I+ +
Sbjct: 193 DYNMPDIDGFELTRRIRAS 211
>gi|317050807|ref|YP_004111923.1| response regulator receiver [Desulfurispirillum indicum S5]
gi|316945891|gb|ADU65367.1| response regulator receiver [Desulfurispirillum indicum S5]
Length = 327
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEE--QSINGFDGLKVDLII 89
VLAVDDS RK+IE+ L + +V + + G A L E+ S G G V LII
Sbjct: 197 VLAVDDSAFIRKLIEKTLITAGYRVISANDGAEAYDMLMEFEQIAHSEGGNIGDHVSLII 256
Query: 90 TDYCMPGMTGYELLKKIK 107
+D MP M G L+K+++
Sbjct: 257 SDVEMPRMDGMHLVKRLR 274
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|121998005|ref|YP_001002792.1| nitrogen metabolism transcriptional regulator NtrC [Halorhodospira
halophila SL1]
gi|121589410|gb|ABM61990.1| nitrogen metabolism transcriptional regulator, NtrC, Fis Family
[Halorhodospira halophila SL1]
Length = 471
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E V VDD R V+E+ L S V +SG AL+ L +E D++
Sbjct: 5 ESQVWVVDDDRSIRWVLEKALRRSGHGVRTFESGDAALEALRREEP-----------DVL 53
Query: 89 ITDYCMPGMTGYELLKKIKVTTP 111
ITD MPG+ G++LL++++ +TP
Sbjct: 54 ITDLRMPGLGGHDLLQQVQASTP 76
>gi|115526851|ref|YP_783762.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris
BisA53]
gi|115520798|gb|ABJ08782.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris
BisA53]
Length = 723
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 24 PSDTEEV-----HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
P DT E+ VL VDD R V +L C V SG AL L D
Sbjct: 585 PEDTLELSGAARRVLLVDDDSAVRDVAASMLREQGCVVVEAGSGGAALDLLERDP----- 639
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTP 111
+ DL++ D+ MPGMTG E+ +++K+ P
Sbjct: 640 ----VPFDLMVIDFAMPGMTGAEVAREVKLRRP 668
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|410632605|ref|ZP_11343260.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola arctica BSs20135]
gi|410147842|dbj|GAC20127.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola arctica BSs20135]
Length = 266
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRAL 66
ASL LI+ D DL D +V VL VDDS + R I R+L ++ K+ ++G AL
Sbjct: 125 ASLDLINS--DELDLDLFDVHDVRVLLVDDSKLARNHIRRVLNSLGLQKILEAENGAEAL 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYEL 102
L N FD L++TDY MP M G EL
Sbjct: 183 TLL------KDNTFD-----LVVTDYNMPEMDGREL 207
>gi|381158594|ref|ZP_09867827.1| chemotaxis signal transduction protein [Thiorhodovibrio sp. 970]
gi|380879952|gb|EIC22043.1| chemotaxis signal transduction protein [Thiorhodovibrio sp. 970]
Length = 308
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD-GLKVDLIIT 90
VL +DDS V R I+R L + T ++ GR+AL+ + E+ +G D ++I+
Sbjct: 178 VLVIDDSSVARHQIQRALEQLGIECTLMNDGRQALELI---EQMVADGIDIASHFLMVIS 234
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLY 116
D MP M GYEL +I+ N +Y
Sbjct: 235 DIEMPEMDGYELTTQIRANPGTNNIY 260
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|386347440|ref|YP_006045689.1| multi-sensor hybrid histidine kinase [Spirochaeta thermophila DSM
6578]
gi|339412407|gb|AEJ61972.1| multi-sensor hybrid histidine kinase [Spirochaeta thermophila DSM
6578]
Length = 1078
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 57/191 (29%)
Query: 11 RLISDEIDGFDLSPSD------TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRR 64
RL+ +E +G P+ + + VL V+D+ V+ V RLL +V +SG+
Sbjct: 792 RLVLEEAEGEAAPPAKGQVPRVSRAMRVLVVEDNRVNALVARRLLEHLGHRVLVAESGKD 851
Query: 65 ALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLN 124
AL LG +E VD + D MPGM G+E ++I+
Sbjct: 852 ALALLGREE-----------VDAVFMDVEMPGMDGFECARRIRAG--------------- 885
Query: 125 LQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFI 184
+ R +PV +++ + DR E G + +
Sbjct: 886 -------------------------EAGGRARMVPVFALTAHAVGEIQDRVDEVGMDGVV 920
Query: 185 VKPVKLSDVKR 195
+KPV + D+ R
Sbjct: 921 LKPVGIEDLAR 931
>gi|303245624|ref|ZP_07331907.1| response regulator receiver modulated diguanylate cyclase
[Desulfovibrio fructosovorans JJ]
gi|302492887|gb|EFL52752.1| response regulator receiver modulated diguanylate cyclase
[Desulfovibrio fructosovorans JJ]
Length = 418
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
VH+L DDS R + RLLT V D G AL L E + ++I
Sbjct: 127 VHILVADDSQTVRHHLVRLLTAHEFIVHEADDGPYALSVLERHPE----------IKVVI 176
Query: 90 TDYCMPGMTGYELLKKIK 107
TDY MPGM G EL ++I+
Sbjct: 177 TDYFMPGMDGVELTRQIR 194
>gi|224368990|ref|YP_002603154.1| two-component hybrid sensor and response regulator histidine kinase
[Desulfobacterium autotrophicum HRM2]
gi|223691707|gb|ACN14990.1| two-component hybrid sensor and response regulator histidine kinase
[Desulfobacterium autotrophicum HRM2]
Length = 701
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 54/187 (28%)
Query: 7 VASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRAL 66
V + +LI+ + L+ +L VDD+ V++++ +L+ + KVT+ D+GR+ L
Sbjct: 560 VTTTKLITTHL----LAEQAKRSAAILLVDDNPVNQRMATIMLSKAGYKVTSADNGRQTL 615
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQ 126
+ +E + DLI+ D MP M G+E ++I+
Sbjct: 616 ELCRSSKE---------RFDLILMDIFMPEMDGFETTRQIRA------------------ 648
Query: 127 NLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVK 186
LE DS +P+V ++ + +RCL G +DF+ K
Sbjct: 649 ---------------------LEGDSGV--RVPIVAFTANVLPLFKERCLVAGMDDFLTK 685
Query: 187 PVKLSDV 193
P + D+
Sbjct: 686 PFRREDI 692
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|87118378|ref|ZP_01074277.1| Response regulator receiver [Marinomonas sp. MED121]
gi|86166012|gb|EAQ67278.1| Response regulator receiver [Marinomonas sp. MED121]
Length = 301
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+LAVDD ++ +++E L+ S +VT S +A +L + Q D+++
Sbjct: 7 HLLAVDDEEINLRILEHYLSDSDYQVTFAQSSNQAWDYLTNADYQ---------FDVLLL 57
Query: 91 DYCMPGMTGYELLKKIK 107
D+ MP + G ELLKK K
Sbjct: 58 DWVMPDVDGLELLKKAK 74
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|218528322|ref|YP_002419138.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium extorquens
CM4]
gi|218520625|gb|ACK81210.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium extorquens
CM4]
Length = 766
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 7 VASLRLISDEI--DGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRR 64
VA R +DE+ D + + VLAVDD + +L V SG
Sbjct: 611 VAEAREETDEVAADVVQKVGAAARSLTVLAVDDDALVLANTAAMLDDLGHVVLEASSGEE 670
Query: 65 ALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTP 111
AL FL G KVDL+ITDY MPGMTG L + I+ P
Sbjct: 671 ALTFL----------RRGRKVDLVITDYAMPGMTGQHLAEAIRAEWP 707
>gi|157961509|ref|YP_001501543.1| response regulator receiver modulated diguanylate cyclase
[Shewanella pealeana ATCC 700345]
gi|157846509|gb|ABV87008.1| response regulator receiver modulated diguanylate cyclase
[Shewanella pealeana ATCC 700345]
Length = 400
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
+ V VL DDS V RK I LL +V D G AL+ L D +
Sbjct: 119 NQSVKVLVADDSLVSRKFIRSLLEQHLFQVIEADDGISALETLN----------DNPDIK 168
Query: 87 LIITDYCMPGMTGYELLKKIK 107
L+ITDY MPG+ G+ L+ K++
Sbjct: 169 LLITDYNMPGLDGFGLIIKVR 189
>gi|405378802|ref|ZP_11032715.1| PAS domain S-box [Rhizobium sp. CF142]
gi|397324732|gb|EJJ29084.1| PAS domain S-box [Rhizobium sp. CF142]
Length = 691
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 21 DLSPSDTEEV----HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQS 76
D P+D ++V +L VDD + +LT +V SG+ AL+ LG
Sbjct: 563 DAMPADPDKVSGPKRILLVDDDILIAMSSADMLTDLGHEVVEAHSGKEALECLG------ 616
Query: 77 INGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTP 111
G DL+ITDY MPGMTG +L K + P
Sbjct: 617 ----SGADFDLMITDYSMPGMTGGDLAKAARTIAP 647
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|94500870|ref|ZP_01307396.1| Chemotaxis protein CheY (2 CheY domains) [Bermanella marisrubri]
gi|94426989|gb|EAT11971.1| Chemotaxis protein CheY (2 CheY domains) [Oceanobacter sp. RED65]
Length = 263
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 17/103 (16%)
Query: 16 EIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAV---DSGRRALQFLGLD 72
E++ L D +E+ L VDDS RK I +LL ++C + ++ D+G+ A+ L +
Sbjct: 130 EVNDIPLENYDVDELVALIVDDSSTARKHIAKLL--NNCGIESILFADNGQAAIDVLHNE 187
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
KVD +ITDY MP M G L++ I+ ++ F++L
Sbjct: 188 -----------KVDFVITDYNMPEMDGEALVQYIQ-SSDFSYL 218
>gi|436843244|ref|YP_007327622.1| Acetoacetate metabolism regulatory protein AtoC [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432172150|emb|CCO25523.1| Acetoacetate metabolism regulatory protein AtoC [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 444
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L +DD + R+ + +LT AV++G ALQ L +E +L++TD
Sbjct: 7 ILIIDDELIARENLVHVLTKEGYNAVAVETGVEALQQLEKNE-----------YELVLTD 55
Query: 92 YCMPGMTGYELLKKIKVTTP 111
MPGM G ++L+ IK P
Sbjct: 56 LMMPGMNGIQILEHIKEMQP 75
>gi|315644147|ref|ZP_07897317.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315280522|gb|EFU43811.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 1048
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD V+ +V+E +L VT SG+ L L D + DL+I+D
Sbjct: 722 LLIVDDDPVNLQVLEAILPPDEYDVTMATSGKEVLAVL-----------DAQEWDLVISD 770
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M+GYEL ++I+ +
Sbjct: 771 IMMPQMSGYELTRRIR-------------------------------------------E 787
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLT 201
L E+PV+++++ + I GA D++ KPV+ +++ + LT
Sbjct: 788 RFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEAIEIRSRIEALT 837
>gi|302037960|ref|YP_003798282.1| putative response regulator [Candidatus Nitrospira defluvii]
gi|300606024|emb|CBK42357.1| putative Response regulator [Candidatus Nitrospira defluvii]
Length = 496
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L DDS RKV ERLLT + VT +G AL L D + DLI++D
Sbjct: 4 ILIADDSIAVRKVAERLLTEAGMGVTLAANGSEALALLSKD-----------RPDLIVSD 52
Query: 92 YCMPGMTGYELLKKIK 107
MP +GYE+ I+
Sbjct: 53 VIMPDKSGYEVCAYIR 68
>gi|225872621|ref|YP_002754078.1| chemotaxis protein CheY [Acidobacterium capsulatum ATCC 51196]
gi|225791309|gb|ACO31399.1| chemotaxis protein CheY [Acidobacterium capsulatum ATCC 51196]
Length = 129
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 14/81 (17%)
Query: 29 EVHVLAVDDSFVDRKVIERLL---TISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
E+ VL VDDS V RK++ER L ++ +V SG+ AL+ L +V
Sbjct: 3 EIKVLIVDDSAVMRKIVERSLRSAGLALAQVWEAGSGKEALEVL-----------QAQQV 51
Query: 86 DLIITDYCMPGMTGYELLKKI 106
DLI +D MP M G E L ++
Sbjct: 52 DLIFSDINMPEMNGLEFLAQV 72
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|152994395|ref|YP_001339230.1| multi-sensor hybrid histidine kinase [Marinomonas sp. MWYL1]
gi|150835319|gb|ABR69295.1| multi-sensor hybrid histidine kinase [Marinomonas sp. MWYL1]
Length = 1310
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 6 GVASLRLISDEIDGFDLSPS-DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRR 64
G S+ LI +G D+S S + VL V+D+ ++R++ E LL+ S T+ +G+
Sbjct: 919 GPESVSLIDHRSNGNDISFSYELAGAKVLLVEDNEINRELAEELLSRSGILFTSATNGQE 978
Query: 65 ALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPF 112
A+ LG D+ D I+ D MP M GY KKI+ T +
Sbjct: 979 AISLLGSDD-----------FDCILMDCQMPIMDGYTATKKIRTMTQY 1015
>gi|262404070|ref|ZP_06080625.1| sensory box sensor histidine kinase/response regulator VieS [Vibrio
sp. RC586]
gi|262349102|gb|EEY98240.1| sensory box sensor histidine kinase/response regulator VieS [Vibrio
sp. RC586]
Length = 630
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL DD ++R +I+R L+ T V+ G +AL+ L + EQ DL+IT
Sbjct: 402 HVLVADDDAINRLLIKRQLSELGLSATLVNDGLQALEKLQANPEQ---------YDLLIT 452
Query: 91 DYCMPGMTGYELLKKIK 107
D MP + G+ L +K+K
Sbjct: 453 DGHMPNLDGFALTRKVK 469
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|157963542|ref|YP_001503576.1| response regulator receiver protein [Shewanella pealeana ATCC
700345]
gi|157848542|gb|ABV89041.1| response regulator receiver protein [Shewanella pealeana ATCC
700345]
Length = 265
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 14/101 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCK-VTAVDSGRRAL 66
A++ L+S D DL+ D +++ VL VDDS + R +I+R +T + +T + G++A+
Sbjct: 125 ATIDLLSH--DELDLTHFDVQDLRVLVVDDSKMARNIIKRTITNLGLRLITEAEDGQQAI 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ + +Q + DL+ITDY MP + G L + I+
Sbjct: 183 ELM----QQQM-------FDLVITDYNMPSVDGLALTQFIR 212
>gi|83816521|ref|YP_446721.1| nitrogen regulation protein NtrC [Salinibacter ruber DSM 13855]
gi|83757915|gb|ABC46028.1| nitrogen regulation protein NtrC [Salinibacter ruber DSM 13855]
Length = 524
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+LAVDD + V ERL +VTA SG A++ L + DL++
Sbjct: 27 HILAVDDEVMLHDVFERLFPREGIEVTACSSGTEAIELL-----------EDAAFDLVLA 75
Query: 91 DYCMPGMTGYELLKKIKVTTP 111
+ MPG G ELL I+ P
Sbjct: 76 THQMPGPDGMELLDHIQEHHP 96
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R ++ LL S ++TAV A + L ++E+S +DL++T+
Sbjct: 66 VLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRIL--EDEKSC-------IDLVLTE 116
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP +G LL KI + T
Sbjct: 117 VDMPVHSGTGLLSKI-------MSHKT--------------------------------- 136
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL +GA DF+VKP++ +++K + ++ R
Sbjct: 137 ---LKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWR 184
>gi|332534442|ref|ZP_08410281.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036095|gb|EGI72571.1| putative two-component response regulator [Pseudoalteromonas
haloplanktis ANT/505]
Length = 299
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 71/175 (40%), Gaps = 56/175 (32%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
++ VL VDD ++R V+E+ L + V V+SG +AL F+ +VD
Sbjct: 2 SKRAKVLIVDDDPINRLVLEKTLKVEH-DVFLVESGEKALTFV-----------KTAQVD 49
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LII D MPG+ GYE+L ++K P I P F S
Sbjct: 50 LIILDVIMPGIDGYEVLVQLK-ENP-----------------------ITQSIPVIFISA 85
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
N D A + LE GA D+I KP S V+ R+++ L
Sbjct: 86 NRSHDDEA-------------------KGLELGAMDYITKPFSPSIVRVRVRNQL 121
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|119898694|ref|YP_933907.1| two-component response regulator [Azoarcus sp. BH72]
gi|119671107|emb|CAL95020.1| probable two-component response regulator [Azoarcus sp. BH72]
Length = 301
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 55/175 (31%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
E +L VDD ++RK++ LL V SG +AL+ + D VD
Sbjct: 3 VERHRILVVDDERINRKLLSELLE-EHHDVVIAKSGEQALERVQADS----------AVD 51
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
LI+ D MPGM+G+++L+++K
Sbjct: 52 LILLDVVMPGMSGHDVLRRLKA-------------------------------------- 73
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
S A +++PV+ ++S N + + L+ GA D+I KP V+ R++++L
Sbjct: 74 -----SDATKDVPVIFITSLNSVDDEEIGLDLGAADYITKPFHPGIVRLRVENHL 123
>gi|409405789|ref|ZP_11254251.1| chemotaxis regulator protein [Herbaspirillum sp. GW103]
gi|386434338|gb|EIJ47163.1| chemotaxis regulator protein [Herbaspirillum sp. GW103]
Length = 135
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 54/180 (30%)
Query: 31 HVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ L VDD R+++ LL + K+ D G AL+ L L V ++
Sbjct: 7 YFLVVDDFSTMRRIVSGLLKELEYTKMVEADDGSSALKILEAG---------ALPVTFVL 57
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
TD+ MPGM G LLKKI+ T PS
Sbjct: 58 TDWNMPGMDGLTLLKKIRAT----------------------------------PS---- 79
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYLTRDVNLGN 208
L +PV+++++E I + GA+ +IVKP + +K +I+ L R ++ N
Sbjct: 80 -----LAHLPVLMITAEAKKENIVVAAQSGADGYIVKPFTAATLKEKIEKILARRASMAN 134
>gi|260777959|ref|ZP_05886852.1| signal transduction histidine kinase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605972|gb|EEX32257.1| signal transduction histidine kinase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 619
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 54/180 (30%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
LSP + VL V+D+ V+++VI+ +L + +V ++G AL++ +E
Sbjct: 468 LSPKYKTGLKVLVVEDTRVNQQVIQVMLNLLGLEVDIANNGVEALEYCQQNE-------- 519
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
VD I+ D MP M GYE +KI+
Sbjct: 520 ---VDAILMDCHMPVMDGYEATQKIR---------------------------------- 542
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKR-IKDYL 200
Q +P++ +++ I +RC E G F+ KPVK +++ + DY+
Sbjct: 543 --------QLEGWAAYVPIIAVTANVIKEDRERCFEIGMNGFLSKPVKPKEIEEALIDYV 594
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|297828473|ref|XP_002882119.1| cytokinin-independent 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327958|gb|EFH58378.1| cytokinin-independent 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1125
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 24 PSDTEEVH---VLAVDDSFVDRKVIE-RLLTISSCKVTAVDSGRRALQFL--GLDEEQSI 77
PSD E + VL VDD+F+ RKV +L + +V DSG+ AL+ + GL +++
Sbjct: 977 PSDDEFLRGKRVLVVDDNFLTRKVATGKLKKMGVSEVLQCDSGKEALRLVTEGLTQKEEQ 1036
Query: 78 NGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ L D I D MP M GYE ++I+
Sbjct: 1037 CSVNKLPFDYIFMDCQMPEMDGYEATREIR 1066
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|148656813|ref|YP_001277018.1| putative PAS/PAC sensor protein [Roseiflexus sp. RS-1]
gi|148568923|gb|ABQ91068.1| putative PAS/PAC sensor protein [Roseiflexus sp. RS-1]
Length = 969
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 54/167 (32%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
TE H+L VDD R++++ LL+ + +V+ +G AL +L L + D
Sbjct: 2 TELAHILVVDDDASVRRMLQILLSNAGYRVSLATTGEEALAYLEL-----------VTPD 50
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSN 146
L++ D +PG++G +++++IK + P PF
Sbjct: 51 LVLLDVALPGVSGRQVMERIK-SDPDR--------------------------PF----- 78
Query: 147 NLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
IPV++++ + L+ GA+DF+VKPV L+++
Sbjct: 79 -----------IPVILVTGHSDPEAKVAALDAGADDFLVKPVDLAEL 114
>gi|405354623|ref|ZP_11023984.1| response regulator [Chondromyces apiculatus DSM 436]
gi|397092338|gb|EJJ23112.1| response regulator [Myxococcus sp. (contaminant ex DSM 436)]
Length = 231
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E VL VDD + ++RL +V +G AL+ L +G D+
Sbjct: 2 EAFKVLIVDDEPPIARALQRLFRREGFEVQIAFNGNEALERL-----------EGFHPDI 50
Query: 88 IITDYCMPGMTGYELLKKIKVTTPF 112
++TD+ MPGMTG ELL+++K + P
Sbjct: 51 VLTDFRMPGMTGSELLQRVKRSHPL 75
>gi|374999155|ref|YP_004974653.1| Chemotaxis sensor histidine kinase CheA [Azospirillum lipoferum 4B]
gi|357426580|emb|CBS89509.1| Chemotaxis sensor histidine kinase CheA [Azospirillum lipoferum 4B]
Length = 747
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
H+L VDDS R + + +L +VT GR AL+ L +G++V LII
Sbjct: 628 AHILVVDDSITTRTLEKSILEAHGYRVTLCVDGREALERLS----------EGMEVGLII 677
Query: 90 TDYCMPGMTGYELLKKIKV 108
+D MP M G+ LL+ +K
Sbjct: 678 SDVEMPRMDGFALLQAVKA 696
>gi|220903479|ref|YP_002478791.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219867778|gb|ACL48113.1| response regulator receiver modulated CheW protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 346
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL--GLDEEQSINGFDGLKVD 86
+ H+L DDS R +I+ L S +VTAV SGR A ++L +E Q+ V
Sbjct: 210 QFHLLVADDSNSLRHIIKSSLQKSGFRVTAVASGREAWEYLQTARNEAQAQGKELTDMVH 269
Query: 87 LIITDYCMPGMTGYELLKKIKVT 109
L+I+D MP M G+ L +I+ T
Sbjct: 270 LVISDIEMPEMDGHMLTAQIRDT 292
>gi|209515313|ref|ZP_03264180.1| Hpt sensor hybrid histidine kinase [Burkholderia sp. H160]
gi|209504294|gb|EEA04283.1| Hpt sensor hybrid histidine kinase [Burkholderia sp. H160]
Length = 721
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
DT +H+L VDD +R++I L + DSG AL+ F+
Sbjct: 485 DTHVIHILVVDDQLANRELIVAQLATLGYEADMADSGGAALRR-----------FNERHY 533
Query: 86 DLIITDYCMPGMTGYELLKKIK 107
DL++TD MPGM GY L + ++
Sbjct: 534 DLVMTDINMPGMDGYALAQCLR 555
>gi|218888023|ref|YP_002437344.1| chemotaxis protein CheW [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758977|gb|ACL09876.1| response regulator receiver modulated CheW protein [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 323
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL----GLDEEQSINGF 80
+ E+ HVL DDS R +I L + +VT SGR A L EE+ + +
Sbjct: 179 TQGEQWHVLIADDSSAIRNMIGSTLEKAGFRVTRTSSGREAWDVLVDWRKRSEEERKHIY 238
Query: 81 DGLKVDLIITDYCMPGMTGYELLKKIK 107
D VDL+++D MP M G+ L ++IK
Sbjct: 239 D--YVDLVVSDIEMPEMDGHNLTRRIK 263
>gi|254227634|ref|ZP_04921065.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262395682|ref|YP_003287535.1| sensory box sensor histidine kinase/response regulator [Vibrio sp.
Ex25]
gi|151939676|gb|EDN58503.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262339276|gb|ACY53070.1| putative sensory box sensor histidine kinase/response regulator
[Vibrio sp. Ex25]
Length = 873
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 51/168 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D +H+L +DS ++R +IE++L + K+T + G A++ + L
Sbjct: 737 DFSSLHLLVAEDSHINRILIEKMLQDTGVKLTLAEDGVEAVEL-----------YKQLSP 785
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DL+ITD MP G+ + K I+
Sbjct: 786 DLVITDISMPNKDGFGVTKDIREL------------------------------------ 809
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDV 193
Q+S A P+V S+ + + + + G +D++ KPV+ SD+
Sbjct: 810 ----QESGAFPWCPIVAFSAHAMQEQQQKSIALGMDDYLTKPVQKSDL 853
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|372488378|ref|YP_005027943.1| chemotaxis signal transduction protein [Dechlorosoma suillum PS]
gi|359354931|gb|AEV26102.1| chemotaxis signal transduction protein [Dechlorosoma suillum PS]
Length = 322
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 15 DEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL----- 69
DE + P D E V DDS V RK IER L + K A +GR+A + L
Sbjct: 168 DEFMYRSIVPIDKPECTVFFADDSVVARKQIERTLQAMNVKYVAAINGRQAWEELEKMAA 227
Query: 70 -GLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ + +N V L++TD MP M GY L KK+K
Sbjct: 228 YAVSLGRPVNEM----VSLVLTDIEMPEMDGYILTKKVK 262
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220907975|ref|YP_002483286.1| response regulator receiver sensor signal transduction histidine
kinase [Cyanothece sp. PCC 7425]
gi|219864586|gb|ACL44925.1| response regulator receiver sensor signal transduction histidine
kinase [Cyanothece sp. PCC 7425]
Length = 381
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
L PS E H+L VDDS + +I+ +L +V+ G+ AL EQ +N
Sbjct: 6 LLPSARRE-HILVVDDSADNLFLIQTILESEGYEVSTATHGKAAL-------EQVVNA-- 55
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFL 115
DL++ D MPGM GYE+ ++I++ F+
Sbjct: 56 --PPDLVLLDVMMPGMNGYEVTRRIRLNKSLPFM 87
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V V++G +A +L + QS +DL++
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL--QDMQS-------NIDLVL 93
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 94 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 117
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS + + + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 118 -------KDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 164
>gi|315644507|ref|ZP_07897639.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
gi|315280014|gb|EFU43311.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
Length = 1031
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 54/170 (31%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD V+ +V+ LL + + +G +AL+ + G +DL+ITD
Sbjct: 699 VLLVDDDPVNLQVLRSLLFAENYNLLTASNGVQALEHIR----------SGQGIDLVITD 748
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+ MPGM+G +L + ++ +
Sbjct: 749 WMMPGMSGLQLCRTVR-------------------------------------------E 765
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
L E+P++++++ ++ + L+ GA DF+ KPV +++ R+++ L
Sbjct: 766 QHTLFELPILMLTARSLPEDVRTGLQAGANDFLRKPVDADELRARVRNLL 815
>gi|160899194|ref|YP_001564776.1| response regulator receiver modulated CheW protein [Delftia
acidovorans SPH-1]
gi|333914688|ref|YP_004488420.1| response regulator receiver modulated CheW protein [Delftia sp.
Cs1-4]
gi|160364778|gb|ABX36391.1| response regulator receiver modulated CheW protein [Delftia
acidovorans SPH-1]
gi|333744888|gb|AEF90065.1| response regulator receiver modulated CheW protein [Delftia sp.
Cs1-4]
Length = 323
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 22 LSPSDTEEVH---------------VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRAL 66
+SP+D +E+ VLA DDSFV R +IE+ L + + SG+ A
Sbjct: 169 VSPTDAQEITPEKVGARLKLKPGAIVLAADDSFVARSLIEKELKVLQAPYEMLKSGKEAW 228
Query: 67 QFLG--LDEEQSINGFDGL----KVDLIITDYCMPGMTGYELLKKIKVTTPFN 113
L D Q+ +GL KV L++TD MP M G+ L + IK F+
Sbjct: 229 DRLNAIADSAQA----EGLTVADKVALVLTDLEMPEMDGFTLTRHIKQDARFH 277
>gi|156742122|ref|YP_001432251.1| multi-sensor hybrid histidine kinase [Roseiflexus castenholzii DSM
13941]
gi|156233450|gb|ABU58233.1| multi-sensor hybrid histidine kinase [Roseiflexus castenholzii DSM
13941]
Length = 819
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD R ++ RLLT + T V SG A + + ++S DLI+TD
Sbjct: 693 ILVVDDEEAVRALLARLLTDLGHRPTTVASGEAAFEIIA---QRSF--------DLILTD 741
Query: 92 YCMPGMTGYELLKKIKVTTPF 112
MPGMTG+EL + I+ P
Sbjct: 742 IKMPGMTGFELYQHIRQRDPH 762
>gi|116252628|ref|YP_768466.1| two component response regulator transcriptional regulatory protein
[Rhizobium leguminosarum bv. viciae 3841]
gi|115257276|emb|CAK08371.1| putative two component response regulator transcriptional
regulatory protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 262
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ +SG +AL+ L + + + L+IT
Sbjct: 129 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKANRD----------IGLVIT 178
Query: 91 DYCMPGMTGYELLKKIKVT 109
DY MP + G+EL ++I+
Sbjct: 179 DYNMPDIDGFELTRRIRAN 197
>gi|71906373|ref|YP_283960.1| response regulator receiver:CheW-like protein [Dechloromonas
aromatica RCB]
gi|71845994|gb|AAZ45490.1| Response regulator receiver:CheW-like protein [Dechloromonas
aromatica RCB]
Length = 322
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLG-- 70
I +EI + P D E V DDS V RK IER L+ K + +GR+ +
Sbjct: 166 IDNEIMYRGVVPVDRPECTVFYCDDSSVARKQIERTLSAMGVKGISAVNGRQMWDEMEKV 225
Query: 71 LDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFN 113
QSI + L++TD MP M GY L KKIK FN
Sbjct: 226 ATYAQSIGKTASSIISLVLTDIEMPEMDGYILTKKIKSDPRFN 268
>gi|24374763|ref|NP_718806.1| chemotaxis signal transduction system response regulator CheV
[Shewanella oneidensis MR-1]
gi|24349429|gb|AAN56250.1| chemotaxis signal transduction system response regulator CheV
[Shewanella oneidensis MR-1]
Length = 306
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 13 ISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLD 72
IS+E++ L+ T+ H++ +DDS V RK I R L + ++ GR AL L
Sbjct: 163 ISEEVNQ-QLTIDRTQHYHIMVIDDSAVARKQIIRSLESLNLQIDTAKDGREALDKLKAI 221
Query: 73 EEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ N D ++ LII+D MP M GY L +I+
Sbjct: 222 ASEMNNVAD--EIPLIISDIEMPEMDGYTLTAEIR 254
>gi|440720362|ref|ZP_20900780.1| PAS protein [Pseudomonas syringae BRIP34876]
gi|440726490|ref|ZP_20906743.1| PAS protein [Pseudomonas syringae BRIP34881]
gi|440365887|gb|ELQ02974.1| PAS protein [Pseudomonas syringae BRIP34876]
gi|440366072|gb|ELQ03157.1| PAS protein [Pseudomonas syringae BRIP34881]
Length = 1187
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
DT +H+L VDD +R V+ R L +VTAV+ G+ AL + +G+
Sbjct: 941 DTRSLHLLVVDDMSANRLVLTRQLEFLGHQVTAVEDGKAALW----------SWCEGV-F 989
Query: 86 DLIITDYCMPGMTGYELLKKIK 107
D +ITD MPG++GY L + I+
Sbjct: 990 DAVITDCNMPGISGYALTQAIR 1011
>gi|315127663|ref|YP_004069666.1| two-component response regulator [Pseudoalteromonas sp. SM9913]
gi|315016177|gb|ADT69515.1| two-component response regulator [Pseudoalteromonas sp. SM9913]
Length = 299
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 69/171 (40%), Gaps = 58/171 (33%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD ++R ++E+ L+ V V SG AL F+ +VDLII D
Sbjct: 7 ILIVDDDALNRIILEKTLS-DEHDVYLVTSGEDALAFV-----------KHTQVDLIILD 54
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS-NNLEQ 150
MPGM GYE+L ++K SI P F S NN +
Sbjct: 55 IMMPGMNGYEVLVQLKEN------------------------SISQAIPIIFISANNRHE 90
Query: 151 DSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVK-RIKDYL 200
D + + LE GA D+I KP + VK R+++ L
Sbjct: 91 DEA--------------------KGLELGAMDYIGKPFSAAIVKVRVRNQL 121
>gi|423695415|ref|ZP_17669905.1| sensor histidine kinase/response regulator [Pseudomonas fluorescens
Q8r1-96]
gi|388009643|gb|EIK70894.1| sensor histidine kinase/response regulator [Pseudomonas fluorescens
Q8r1-96]
Length = 795
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P D + HVL VDD + + + LL V+ +G AL L EQSI
Sbjct: 660 TPFDGQGKHVLLVDDIEQNSEWLYDLLAGYGFDVSMAANGEDALACLA---EQSI----- 711
Query: 83 LKVDLIITDYCMPGMTGYELLKKIK 107
DL+I+D MPGM G+ELL++++
Sbjct: 712 ---DLLISDQMMPGMDGWELLRQVR 733
>gi|193216053|ref|YP_001997252.1| CheA signal transduction histidine kinase [Chloroherpeton thalassium
ATCC 35110]
gi|193089530|gb|ACF14805.1| CheA signal transduction histidine kinase [Chloroherpeton thalassium
ATCC 35110]
Length = 2433
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E++ VLA DDS RK I+ +L + V +VD G AL N DL
Sbjct: 2313 EKITVLAADDSPSVRKYIQSVLHQADIDVVSVDDGLNAL-----------NKLPTANCDL 2361
Query: 88 IITDYCMPGMTGYELLKKIKVTTPF 112
IITD MP M G+EL+ +++ + +
Sbjct: 2362 IITDLEMPRMNGFELVSEVRKLSQY 2386
>gi|95931290|ref|ZP_01314007.1| CheA signal transduction histidine kinases [Desulfuromonas
acetoxidans DSM 684]
gi|95132650|gb|EAT14332.1| CheA signal transduction histidine kinases [Desulfuromonas
acetoxidans DSM 684]
Length = 749
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 55/169 (32%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDDS RK +L + +V +G AL+ L DE KVD+I+TD
Sbjct: 630 VLVVDDSLSIRKYASMILEANGVEVLLATNGHEALEVLE-DE----------KVDMILTD 678
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M GYELL ++ N E
Sbjct: 679 LEMPVMHGYELLSEL---------------------------------------NRREN- 698
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV-KLSDVKRIKDY 199
LR IP V+++S + ++ + GA D++VKP + S ++ I++Y
Sbjct: 699 ---LRMIPTVVITSRSGGHHQEKAFKLGASDYLVKPFDEESLIRMIREY 744
>gi|46581630|ref|YP_012438.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120601211|ref|YP_965611.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|387154828|ref|YP_005703764.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
gi|46451053|gb|AAS97698.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120561440|gb|ABM27184.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|311235272|gb|ADP88126.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
Length = 126
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 30 VHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ +L VDD R++I+ +L + V D G A + L D +VD +
Sbjct: 7 MRILVVDDFSTMRRIIKNILRQLGFSNVIEADDGTTAWETLNKD-----------RVDFV 55
Query: 89 ITDYCMPGMTGYELLKKIKVTTPF 112
I+D+ MP MTG ELL+K++ + F
Sbjct: 56 ISDWNMPNMTGIELLRKVRASEEF 79
>gi|424045552|ref|ZP_17783117.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
protein [Vibrio cholerae HENC-03]
gi|408886254|gb|EKM24932.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
protein [Vibrio cholerae HENC-03]
Length = 775
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 45 IERLLTISSCKVTAVDSGRRALQFL----GLDEEQSINGFDGLK------VDLIITDYCM 94
I+ + + + V VD R LQF G+D +I+G D L+ D+I+TD M
Sbjct: 653 IDSFVGVKALVVDDVDFNREVLQFHLKEKGIDSRSAIDGVDALERLDRESFDIILTDVSM 712
Query: 95 PGMTGYELLKKIKVTTP 111
P M G EL K+++V P
Sbjct: 713 PNMDGIELAKRVRVIAP 729
>gi|359729269|ref|ZP_09267965.1| response regulator [Leptospira weilii str. 2006001855]
Length = 257
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 6 GVASLRLISDEIDGFDLSPSDTEEVH---VLAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
G+ L+L+ EI F + E+ +L VDDS ++ ++ ++L + A G
Sbjct: 112 GIEELKLVIKEIIKFSYQKNSIEQRKFGKILIVDDSELNLLLLGKILERNGYSFQAFTEG 171
Query: 63 RRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
++A ++L QS G + I+TD+ MPG +G EL++ I+ F+ + T+I
Sbjct: 172 KKAYEYL-----QSF----GENISYILTDWIMPGFSGQELVEAIRKQEKFDKIPITVITG 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|345303921|ref|YP_004825823.1| two component, sigma54 specific, Fis family transcriptional
regulator [Rhodothermus marinus SG0.5JP17-172]
gi|345113154|gb|AEN73986.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus SG0.5JP17-172]
Length = 476
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 62/217 (28%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
++ E H+L VDD + + ERL T ++T+ + +AL+ L ++ + FD
Sbjct: 4 MAAPQREAPHILLVDDEHLLHTLFERLFTRHGMRLTSCYNALQALEVL----KKEADAFD 59
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPF 141
L+ITD+ MP M G ELL I+ P
Sbjct: 60 -----LVITDFKMPDMDGLELLAYIRQEHP------------------------------ 84
Query: 142 FFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
++ V+++++ + R +++GA D+I KP + V+R++ L
Sbjct: 85 ---------------DLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAAL 129
Query: 201 TR------DVNLGNEGRGINKRKARESCDLSSSPPSV 231
R +VN R + KR+ + + + P++
Sbjct: 130 ARRRKQQEEVNNRTPAR-LAKRRRKPTIEYVGEHPTI 165
>gi|333997599|ref|YP_004530211.1| MmoS protein [Treponema primitia ZAS-2]
gi|333740313|gb|AEF85803.1| MmoS [Treponema primitia ZAS-2]
Length = 808
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 53/173 (30%)
Query: 21 DLSPSDTEE-----VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQ 75
D +P++TE V VL V+D+ ++ +++ LL+ +VT +G+ AL L +
Sbjct: 667 DTAPANTENAVLHGVRVLLVEDNEINAMIVQELLSAVGMEVTTAQNGQEALDILSDKAKS 726
Query: 76 SINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSI 135
+ FD L++ D MP M GYE + IK T +
Sbjct: 727 QLPPFD-----LVLMDLQMPVMDGYEATRIIKETPEY----------------------- 758
Query: 136 CFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+++PV +++ +RC+ G ED + KP+
Sbjct: 759 --------------------KDMPVYALTAHAFPEEKERCIALGMEDHLTKPI 791
>gi|303247833|ref|ZP_07334101.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
gi|302490734|gb|EFL50635.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
Length = 129
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 17/90 (18%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISS-CKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
++ VL VDDS V R +I ++L + +V GR+AL L VD
Sbjct: 4 QLKVLVVDDSKVMRGIIRKMLCMKGDAEVLEAAGGRQALDVLAKS-----------PVDC 52
Query: 88 IITDYCMPGMTGYELLKKIK-----VTTPF 112
II+D+ MPGM G +LL++++ TPF
Sbjct: 53 IISDWNMPGMKGIDLLRRVRGDGVLAETPF 82
>gi|429214636|ref|ZP_19205799.1| putative chemotaxis protein [Pseudomonas sp. M1]
gi|428154922|gb|EKX01472.1| putative chemotaxis protein [Pseudomonas sp. M1]
Length = 310
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDDS V RK + R L +V A++ GR+AL + L + + G G ++ ++I+D
Sbjct: 181 VLVVDDSSVARKQLIRCLETVGVEVLALNDGRQALDY--LQQMLAAGGNPGQELLMVISD 238
Query: 92 YCMPGMTGYELLKKIK 107
MP M GY L +I+
Sbjct: 239 IEMPEMDGYTLTAEIR 254
>gi|206889988|ref|YP_002248238.1| chemotaxis protein histidine kinase CheA, [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741926|gb|ACI20983.1| chemotaxis protein histidine kinase CheA, putative
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 742
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 54/156 (34%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDDS RK ++ +L +V G AL L + KVD+++TD
Sbjct: 624 VLVVDDSISVRKTLQSVLEAKKLRVYTAKDGVEALNLLERN-----------KVDMVVTD 672
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
MP M GYEL+ +++ F
Sbjct: 673 LEMPVMHGYELISRLRKDARF--------------------------------------- 693
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKP 187
+ +P+++++S ++ E GA+ +IVKP
Sbjct: 694 ----KNLPIIVLTSRGTKKHEEKAFELGADGYIVKP 725
>gi|46578528|ref|YP_009336.1| response regulator [Desulfovibrio vulgaris str. Hildenborough]
gi|120603890|ref|YP_968290.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|387152010|ref|YP_005700946.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
gi|46447939|gb|AAS94595.1| response regulator [Desulfovibrio vulgaris str. Hildenborough]
gi|120564119|gb|ABM29863.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|311232454|gb|ADP85308.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
Length = 268
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
VH L VDDS R +I +LL + V ++G L L + + V L+I
Sbjct: 131 VHALVVDDSRTQRGIIRQLLEVQCVNVLEAENGVEGLAVLEANPQ----------VTLVI 180
Query: 90 TDYCMPGMTGYELLKKIK 107
TDY MP M G EL+++++
Sbjct: 181 TDYQMPEMDGIELVRELR 198
>gi|443311958|ref|ZP_21041580.1| chemotaxis protein histidine kinase-like protein [Synechocystis sp.
PCC 7509]
gi|442778033|gb|ELR88304.1| chemotaxis protein histidine kinase-like protein [Synechocystis sp.
PCC 7509]
Length = 892
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
PS + + +L VDDS RK++++LL+ S +V G+ A++ L
Sbjct: 764 FKPSSSAKATILIVDDSIAVRKLLDQLLSKSGYQVMQCRDGKEAVEVLNR---------S 814
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVT 109
G DL+I+D MP M G+ LL++I+ +
Sbjct: 815 GDFYDLVISDIEMPRMDGFTLLREIRTS 842
>gi|89094469|ref|ZP_01167408.1| Response regulator receiver [Neptuniibacter caesariensis]
gi|89081205|gb|EAR60438.1| Response regulator receiver [Oceanospirillum sp. MED92]
Length = 266
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 32 VLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
VL VDDS + R I+++L ++S + G ALQ + DG + DLIIT
Sbjct: 144 VLVVDDSTMSRNYIKQMLDSLSIHSIDTAADGSDALQMID----------DGARYDLIIT 193
Query: 91 DYCMPGMTGYELLKKIK 107
DY MP + G EL++ I+
Sbjct: 194 DYNMPNVDGKELIEHIR 210
>gi|21242622|ref|NP_642204.1| RpfC protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21108086|gb|AAM36740.1| RpfC protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 725
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L DD +R V++RLL + +VT VD G E ++ D I
Sbjct: 460 MQILVADDHLANRLVLQRLLQKAGHRVTCVDGG-----------EAVLDALADTDYDAAI 508
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
D MPG++G ++LK+++V + ++V
Sbjct: 509 VDLHMPGVSGLDMLKQLRVMQAGGASVTQVVVL 541
>gi|294508655|ref|YP_003572714.1| nitrogen regulation protein NtrC [Salinibacter ruber M8]
gi|294344984|emb|CBH25762.1| nitrogen regulation protein NtrC [Salinibacter ruber M8]
Length = 512
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
H+LAVDD + V ERL +VTA SG A++ L + DL++
Sbjct: 15 HILAVDDEVMLHDVFERLFPREGIEVTACSSGTEAIELL-----------EDAAFDLVLA 63
Query: 91 DYCMPGMTGYELLKKIKVTTP 111
+ MPG G ELL I+ P
Sbjct: 64 THQMPGPDGMELLDHIQEHHP 84
>gi|413943652|gb|AFW76301.1| hypothetical protein ZEAMMB73_695347 [Zea mays]
Length = 106
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDD V KV+ER L + V V R AL+ L E + DG + DL+I
Sbjct: 10 LRVLVVDDDRVCLKVLERQLKCCNYNVMVVTDARTALEMLR--ERKD----DGDQFDLVI 63
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFI 132
+D MP M G+ELL+ I V + + + + + + L I
Sbjct: 64 SDVVMPNMDGFELLELIGVEMDLPVISKALALPIFMHGILLII 106
>gi|410616347|ref|ZP_11327339.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola polaris LMG 21857]
gi|410164056|dbj|GAC31477.1| two-component system, chemotaxis family, response regulator CheY
[Glaciecola polaris LMG 21857]
Length = 266
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLT-ISSCKVTAVDSGRRAL 66
ASL LI+ E DL+ D +V VL VDDS + R I+R+L + ++ ++G AL
Sbjct: 125 ASLDLINTE--ELDLNLFDVRQVRVLLVDDSKLARNHIKRVLQGLGIAQIIEAENGAMAL 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTT 110
L N FD L++TDY MP M G EL + I+ T
Sbjct: 183 TKL------KENTFD-----LVVTDYNMPEMDGRELSEFIRFNT 215
>gi|307719332|ref|YP_003874864.1| autoinducer 2 sensor kinase/phosphatase LuxQ [Spirochaeta
thermophila DSM 6192]
gi|306533057|gb|ADN02591.1| autoinducer 2 sensor kinase/phosphatase LuxQ [Spirochaeta
thermophila DSM 6192]
Length = 1078
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 11 RLISDEIDGFDLSPSD------TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRR 64
R++ +E +G P+ + + VL V+D+ V+ V RLL +V SGR
Sbjct: 792 RIVLEEAEGEAAPPAKGQVSRASRAMRVLVVEDNRVNALVARRLLEHLGHRVLVAGSGRE 851
Query: 65 ALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
AL LG +E VD + D MPGM G+E ++I+
Sbjct: 852 ALDLLGREE-----------VDAVFMDVEMPGMDGFECARRIR 883
>gi|347732938|ref|ZP_08866007.1| response regulator [Desulfovibrio sp. A2]
gi|347518309|gb|EGY25485.1| response regulator [Desulfovibrio sp. A2]
Length = 120
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 30 VHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ VL VDD R++I+ +L + V D G A + L D ++D +
Sbjct: 1 MRVLVVDDFSTMRRIIKNILRQLGFTNVVEADDGTTAWEVLNKD-----------RIDFV 49
Query: 89 ITDYCMPGMTGYELLKKIKVTTPF 112
I+D+ MP MTG ELL+K++ + F
Sbjct: 50 ISDWNMPKMTGIELLRKVRASEEF 73
>gi|226875191|gb|ACO88943.1| cytokinin A-type response regulator 3 [Vitis vinifera]
Length = 33
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 29/33 (87%)
Query: 164 SSENILARIDRCLEDGAEDFIVKPVKLSDVKRI 196
SSENI RI++CLE+GA+ F++KP+K SDVK++
Sbjct: 1 SSENIPTRINKCLEEGAQMFMLKPLKQSDVKKL 33
>gi|220903605|ref|YP_002478917.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219867904|gb|ACL48239.1| response regulator receiver protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 126
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 30 VHVLAVDDSFVDRKVIERLL-TISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
+ VL VDD R+++ +L I V D G A + L + K+D I
Sbjct: 7 MRVLVVDDFSTMRRIVRNILRQIGFQNVVEADDGTTAWEVLNRE-----------KIDFI 55
Query: 89 ITDYCMPGMTGYELLKKIKVTTPF 112
++D+ MP MTG ELL+K++ + F
Sbjct: 56 VSDWNMPNMTGIELLRKVRASEQF 79
>gi|452978334|gb|EME78098.1| hypothetical protein MYCFIDRAFT_145090, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 412
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL-GLDEEQSI-NGFDGLKVDLI 88
H+L V+D+ V++K++ L + C V + G AL L G D QS + + K+DL+
Sbjct: 263 HILLVEDNLVNQKILANQLRKAKCTVIVANHGEEALNILEGSDCWQSRSDDAEAEKIDLL 322
Query: 89 ITDYCMPGMTGYELLKKIK 107
+ D+ MP M G +KI+
Sbjct: 323 LMDWEMPVMDGLTCTRKIR 341
>gi|288939999|ref|YP_003442239.1| multi-sensor hybrid histidine kinase [Allochromatium vinosum DSM
180]
gi|288895371|gb|ADC61207.1| multi-sensor hybrid histidine kinase [Allochromatium vinosum DSM
180]
Length = 1023
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 65/201 (32%)
Query: 6 GVASLRLISDEIDGFDLSPSDTEE----VHVLAVDDSFVDRKVIERLLTISSCKVTAVDS 61
G L ++ D +D +P+D E +L +D+ ++++VI +LL + +VT ++
Sbjct: 645 GARDLPVVQDRVD----TPADHGERLRGARILVAEDNEINQEVILQLLQATGARVTLAEN 700
Query: 62 GRRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIV 121
GR AL E+ N + DL++ D MP M G E + I+ +
Sbjct: 701 GREAL------EQVCANAY-----DLVLMDVQMPVMDGLEATRAIRARAEY--------- 740
Query: 122 FLNLQNLFLFILSICFCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAE 181
RE+P++ M++ + +C+E G
Sbjct: 741 ----------------------------------RELPILAMTANAFESDRRQCIEAGMN 766
Query: 182 DFIVKPVKLSDVKRIKDYLTR 202
D + KP+ + +R+ + L R
Sbjct: 767 DHLAKPI---EPERLTETLAR 784
>gi|28897547|ref|NP_797152.1| chemotaxis CheV [Vibrio parahaemolyticus RIMD 2210633]
gi|153839682|ref|ZP_01992349.1| CheV [Vibrio parahaemolyticus AQ3810]
gi|260364606|ref|ZP_05777208.1| chemotaxis protein CheV [Vibrio parahaemolyticus K5030]
gi|260878289|ref|ZP_05890644.1| chemotaxis protein CheV [Vibrio parahaemolyticus AN-5034]
gi|260898119|ref|ZP_05906615.1| protein CheV [Vibrio parahaemolyticus Peru-466]
gi|260901948|ref|ZP_05910343.1| chemotaxis protein CheV [Vibrio parahaemolyticus AQ4037]
gi|417320496|ref|ZP_12107042.1| chemotaxis CheV [Vibrio parahaemolyticus 10329]
gi|433657043|ref|YP_007274422.1| Chemotaxis protein CheV [Vibrio parahaemolyticus BB22OP]
gi|5361003|gb|AAD42910.1|U12817_4 chemotaxis CheV homolog [Vibrio parahaemolyticus]
gi|28805759|dbj|BAC59036.1| chemotaxis CheV [Vibrio parahaemolyticus RIMD 2210633]
gi|149746792|gb|EDM57780.1| CheV [Vibrio parahaemolyticus AQ3810]
gi|308086122|gb|EFO35817.1| protein CheV [Vibrio parahaemolyticus Peru-466]
gi|308090149|gb|EFO39844.1| chemotaxis protein CheV [Vibrio parahaemolyticus AN-5034]
gi|308106772|gb|EFO44312.1| chemotaxis protein CheV [Vibrio parahaemolyticus AQ4037]
gi|308115124|gb|EFO52664.1| chemotaxis protein CheV [Vibrio parahaemolyticus K5030]
gi|328473459|gb|EGF44307.1| chemotaxis CheV [Vibrio parahaemolyticus 10329]
gi|432507731|gb|AGB09248.1| Chemotaxis protein CheV [Vibrio parahaemolyticus BB22OP]
Length = 308
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRAL-QFLGLDEEQSINGFDGLKVDLIIT 90
+L DDS V RK +ER +T +V +V G+ A + L + +E SI +D ++ L+I+
Sbjct: 184 ILIADDSTVARKQVERAITSIGFEVVSVKDGKEAYNKLLEMAQEGSI--YD--QISLVIS 239
Query: 91 DYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
D MP M GY L +I+ LY +I+ +L +F
Sbjct: 240 DIEMPEMDGYTLTAEIRRNADLKDLY--VILHSSLSGVF 276
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V+ R+V+ LL +V ++G +A +L + QS +DL++
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL--QDMQS-------NIDLVL 81
Query: 90 TDYCMPG-MTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNL 148
T+ M G ++G +LL +I +N + +C
Sbjct: 82 TEVFMHGGLSGIDLLGRI----------------MNHE--------VC------------ 105
Query: 149 EQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
++IPV++MSS +++ + CL +GA DF+ KP++ +++K + ++ R
Sbjct: 106 -------KDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 152
>gi|407000092|gb|EKE17512.1| hypothetical protein ACD_10C00419G0001, partial [uncultured
bacterium]
Length = 879
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E+ +L VDDS + R V+ ++L C+V+ +SG +A+ + E+ F D++
Sbjct: 671 EIDILVVDDSELARTVLSQMLKKQGCRVSTANSGDQAIDLI---RERLDKPF-----DIV 722
Query: 89 ITDYCMPGMTGYELLKKIK 107
I D MPGM G EL + ++
Sbjct: 723 ILDLVMPGMDGIELSRHLR 741
>gi|408672837|ref|YP_006872585.1| PAS/PAC sensor hybrid histidine kinase [Emticicia oligotrophica DSM
17448]
gi|387854461|gb|AFK02558.1| PAS/PAC sensor hybrid histidine kinase [Emticicia oligotrophica DSM
17448]
Length = 920
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P++ + + +L V+D+ ++++ +ER++ S SG A+Q FD
Sbjct: 668 PTNFQNLRILVVEDNLLNQQYLERVMNKWSVNYDVAKSGEEAIQI-----------FDKK 716
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTP---FNFLYSTIIVF 122
+ DL+ D +PG+ G+E K++ P F + T +VF
Sbjct: 717 RFDLVFMDLQLPGIDGFETAVKLRTNFPERTFIIIAMTAVVF 758
>gi|390948827|ref|YP_006412586.1| chemotaxis signal transduction protein [Thiocystis violascens DSM
198]
gi|390425396|gb|AFL72461.1| chemotaxis signal transduction protein [Thiocystis violascens DSM
198]
Length = 307
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDDS V RK IER + + GR AL++L EE + ++++I D
Sbjct: 182 ILVVDDSLVARKQIERAIMELGFRTETRSDGRAALEYL---EELAAADMVESSIEMVIAD 238
Query: 92 YCMPGMTGYELLKKIK 107
MP M GY L +KI+
Sbjct: 239 IEMPRMDGYTLTRKIR 254
>gi|383317280|ref|YP_005378122.1| chemotaxis signal transduction protein [Frateuria aurantia DSM
6220]
gi|379044384|gb|AFC86440.1| chemotaxis signal transduction protein [Frateuria aurantia DSM
6220]
Length = 314
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFL-----GLDEEQSINGFDGLKVD 86
VL VDDS V R+ I RLL + + G +AL L D E GFD
Sbjct: 186 VLVVDDSAVARRQITRLLDQLNLDYMTANDGAQALSLLEDRSAQPDPEHGPAGFD----- 240
Query: 87 LIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLF 129
L+I+D MP M GY L +KI+ T L I++ +L +F
Sbjct: 241 LVISDIEMPQMDGYTLSRKIRETASLRTL--PILLHSSLSGVF 281
>gi|427730967|ref|YP_007077204.1| PAS domain-containing protein [Nostoc sp. PCC 7524]
gi|427366886|gb|AFY49607.1| PAS domain S-box [Nostoc sp. PCC 7524]
Length = 1071
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D + VL VDD R+ + +L + +V V S ALQ L QS ++
Sbjct: 945 DLNGIKVLVVDDDADAREFVAFVLQMYQAEVITVSSALEALQVLA----QS-------QL 993
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTP-FN 113
+++++D MP M GYELL +I+ T P FN
Sbjct: 994 NILVSDIGMPHMDGYELLHQIRTTAPDFN 1022
>gi|294678968|ref|YP_003579583.1| sensor histidine kinase/response regulator receiver protein
[Rhodobacter capsulatus SB 1003]
gi|294477788|gb|ADE87176.1| sensor histidine kinase/response regulator receiver protein
[Rhodobacter capsulatus SB 1003]
Length = 743
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
L VDD V+R ++ER L VT SG AL+ L DE G + DL++TD
Sbjct: 471 ALVVDDLLVNRVILERQLQTYGLDVTLCRSGTEALKVL--DE--------GTRFDLVLTD 520
Query: 92 YCMPGMTGYELLKKIKVT---TPFNFLYS 117
+ MP + G EL ++++ TP L S
Sbjct: 521 HHMPDLDGLELTRRLRAMGHDTPILLLTS 549
>gi|89073675|ref|ZP_01160189.1| hypothetical putative regulatory component of sensory transduction
system [Photobacterium sp. SKA34]
gi|89050450|gb|EAR55942.1| hypothetical putative regulatory component of sensory transduction
system [Photobacterium sp. SKA34]
Length = 324
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 55/161 (34%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E +H+L VDD +R +E L V + SG+ AL N + DL
Sbjct: 2 EPMHILLVDDVLSERMYLELRLKNLGHVVKSFSSGQDAL-----------NSYASFDPDL 50
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++ D CMP M G EL +KI+ CFP +
Sbjct: 51 VVLDICMPDMKGTELAQKIRT-----------------------------CFPEW----- 76
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPV 188
+P++ +S+ + I ++ G +D++ KPV
Sbjct: 77 ----------VPIIFLSAHSEPELIAEAIDKGGDDYLTKPV 107
>gi|289208109|ref|YP_003460175.1| chemotaxis protein CheW [Thioalkalivibrio sp. K90mix]
gi|288943740|gb|ADC71439.1| response regulator receiver modulated CheW protein
[Thioalkalivibrio sp. K90mix]
Length = 309
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
++ VDDS V RK IE + + GR AL FL EEQ+ G V+L+I+D
Sbjct: 184 IVIVDDSVVARKQIEGAIKGLGWEYLVFKDGREALDFL---EEQAEAGTVNEVVELVISD 240
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
MP M GY L +I+ L
Sbjct: 241 IEMPRMDGYTLTARIRANDHLKGL 264
>gi|172036100|ref|YP_001802601.1| two-component hybrid sensor and regulator [Cyanothece sp. ATCC
51142]
gi|171697554|gb|ACB50535.1| two-component hybrid sensor and regulator [Cyanothece sp. ATCC
51142]
Length = 850
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 25 SDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLK 84
+D + VLAVDDS R ++E LLT + + V SG L L FD
Sbjct: 723 TDLRGIKVLAVDDSEDTRHLLEMLLTSYGAETSVVASGTEVLTHL--------KTFDP-- 772
Query: 85 VDLIITDYCMPGMTGYELLKKIKV 108
D++I D MP M GY LL++I+V
Sbjct: 773 -DVLICDISMPDMDGYTLLQEIRV 795
>gi|332186517|ref|ZP_08388261.1| response regulator [Sphingomonas sp. S17]
gi|332013500|gb|EGI55561.1| response regulator [Sphingomonas sp. S17]
Length = 125
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+H+L +D V R+ + R LT S +VTAVD G AL L D DL++
Sbjct: 2 LHILLAEDDEVMREYLTRALTRSGYRVTAVDRGTAALPLL-----------DTEHFDLLL 50
Query: 90 TDYCMPGMTGYELLKKIKVTTP 111
TD MP M G EL ++ P
Sbjct: 51 TDIVMPEMDGIELAQRAAALVP 72
>gi|338175720|ref|YP_004652530.1| chemotaxis protein histidine kinase and related kinases CheA
[Parachlamydia acanthamoebae UV-7]
gi|336480078|emb|CCB86676.1| chemotaxis protein histidine kinase and related kinases CheA
[Parachlamydia acanthamoebae UV-7]
Length = 734
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDDS + R +++ L + +VT + G +AL+ L +K D +ITD
Sbjct: 617 ILLVDDSTISRVILKHALEEKNYQVTIAEDGLQALELL-----------QEMKFDAMITD 665
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIV 121
MP M G EL I+ T +N++ II+
Sbjct: 666 VEMPRMNGLELTSHIR-TQDYNYILPIIII 694
>gi|282890754|ref|ZP_06299274.1| hypothetical protein pah_c026o085 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499347|gb|EFB41646.1| hypothetical protein pah_c026o085 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 734
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDDS + R +++ L + +VT + G +AL+ L +K D +ITD
Sbjct: 617 ILLVDDSTISRVILKHALEEKNYQVTIAEDGLQALELL-----------QEMKFDAMITD 665
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIV 121
MP M G EL I+ T +N++ II+
Sbjct: 666 VEMPRMNGLELTSHIR-TQDYNYILPIIII 694
>gi|404493599|ref|YP_006717705.1| sigma-54-dependent transcriptional response regulator [Pelobacter
carbinolicus DSM 2380]
gi|404398002|gb|ABA89201.2| sigma-54-dependent transcriptional response regulator [Pelobacter
carbinolicus DSM 2380]
Length = 460
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
+L ++D +R+ I LL + +VT ++G +AL+ L S F+ +I+T
Sbjct: 6 QILVIEDEAANREAIALLLGNAGYQVTTAETGEKALEIL------SKTPFE-----VILT 54
Query: 91 DYCMPGMTGYELLKKIKVTTPF 112
D +PG++G E+LK++K PF
Sbjct: 55 DLFLPGVSGIEILKRVKEQWPF 76
>gi|329847928|ref|ZP_08262956.1| response regulator [Asticcacaulis biprosthecum C19]
gi|328842991|gb|EGF92560.1| response regulator [Asticcacaulis biprosthecum C19]
Length = 256
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL +DDS R + +R + +V+ DS E++ + D VDL++
Sbjct: 133 HVLVIDDSSTIRMIAQRAYAGAGYRVSCADS-----------MEEAFSNVDIAHVDLVLC 181
Query: 91 DYCMPGMTGYELLKKIKVTTP 111
D MPGM G++ ++ IK T P
Sbjct: 182 DVFMPGMGGFKGMRTIKTTWP 202
>gi|345870300|ref|ZP_08822253.1| response regulator receiver protein [Thiorhodococcus drewsii AZ1]
gi|343921872|gb|EGV32581.1| response regulator receiver protein [Thiorhodococcus drewsii AZ1]
Length = 241
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAV-DSGRRALQFLGLDEEQSINGFDGLKVDL 87
++ VL VDD R+V+ ++L+ K A+ ++G+ AL FL E VDL
Sbjct: 9 DLRVLLVDDDAFLRRVVSQVLSGLKLKQIAIAENGQEALTFLSNHE-----------VDL 57
Query: 88 IITDYCMPGMTGYELLKKIKV 108
+ITD MP M G EL+K+I++
Sbjct: 58 LITDIQMPKMNGLELIKQIRL 78
>gi|422608913|ref|ZP_16680872.1| PAS protein [Pseudomonas syringae pv. mori str. 301020]
gi|330894540|gb|EGH27201.1| PAS protein [Pseudomonas syringae pv. mori str. 301020]
Length = 1037
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDG 82
+P DT + +L VDD +R+V+ R L +V AV+ G+ AL EE
Sbjct: 788 APVDTRSLRLLVVDDMSANRRVLTRQLEFLGHQVVAVEDGKAALSRWC--EE-------- 837
Query: 83 LKVDLIITDYCMPGMTGYELLKKIK 107
D +ITD MPG++GY L + I+
Sbjct: 838 -PFDAVITDCNMPGISGYALTEAIR 861
>gi|219848501|ref|YP_002462934.1| GAF sensor-containing adenylate/guanylate cyclase [Chloroflexus
aggregans DSM 9485]
gi|219542760|gb|ACL24498.1| adenylate/guanylate cyclase with GAF sensor(s) [Chloroflexus
aggregans DSM 9485]
Length = 981
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 58/167 (34%)
Query: 27 TEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVD 86
TE H+L V+D R++ + +L+ +V+ V+SG AL FL L + D
Sbjct: 2 TEPAHILVVEDDPDIRRIFQAVLSRDGFRVSIVNSGEEALSFLQL-----------ITPD 50
Query: 87 LIITDYCMPGMTGYELLKKIKV--TTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFP 144
LI+ D +PG+ G E+ ++IK + PF
Sbjct: 51 LILLDLALPGIGGDEVTRRIKSDRSKPF-------------------------------- 78
Query: 145 SNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLS 191
IPV+I+S+ L L+ GA+D +VKPV +
Sbjct: 79 -------------IPVIIVSAHADLDTSVSNLDAGADDVLVKPVDFN 112
>gi|398332257|ref|ZP_10516962.1| response regulator [Leptospira alexanderi serovar Manhao 3 str. L
60]
Length = 257
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 6 GVASLRLISDEIDGFDLSPSDTEEVHV---LAVDDSFVDRKVIERLLTISSCKVTAVDSG 62
G+ L+L+ EI F + E+ V L VDDS ++ ++ ++L + A G
Sbjct: 112 GIDELKLVIKEIIKFSYQKNSIEQRKVGKILIVDDSELNLLLLGKILERNGYSFQAFTEG 171
Query: 63 RRALQFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
++A ++L QS G + I+TD+ MPG +G EL++ I+ F+ + T+I
Sbjct: 172 KKAYEYL-----QS----SGENISYILTDWIMPGFSGQELVEAIRKQEKFDKIPITVITG 222
Query: 123 L 123
L
Sbjct: 223 L 223
>gi|335044504|ref|ZP_08537529.1| chemotaxis signal transduction protein [Methylophaga
aminisulfidivorans MP]
gi|333787750|gb|EGL53634.1| chemotaxis signal transduction protein [Methylophaga
aminisulfidivorans MP]
Length = 306
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL-KVDLII 89
H+L VDDS V R I+R L ++T +G+ AL L + NG D K+ L+I
Sbjct: 181 HILVVDDSSVARNQIKRTLEQIGLEITLAKNGKEALDML---KAWKANGEDIYEKIALMI 237
Query: 90 TDYCMPGMTGYELLKKIK 107
+D MP M GY L +++
Sbjct: 238 SDIEMPEMDGYTLTSEVR 255
>gi|190892206|ref|YP_001978748.1| two-component response regulator protein [Rhizobium etli CIAT 652]
gi|190697485|gb|ACE91570.1| two-component response regulator protein [Rhizobium etli CIAT 652]
Length = 262
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ +SG +AL+ L + + + L+IT
Sbjct: 129 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKANRD----------IGLMIT 178
Query: 91 DYCMPGMTGYELLKKIKVT 109
DY MP + G+EL ++I+
Sbjct: 179 DYNMPDIDGFELTRRIRAN 197
>gi|148657135|ref|YP_001277340.1| nitrogen specific signal transduction histidine kinase NtrB
[Roseiflexus sp. RS-1]
gi|148569245|gb|ABQ91390.1| signal transduction histidine kinase, nitrogen specific, NtrB
[Roseiflexus sp. RS-1]
Length = 819
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD ++ RLLT + T V SG AL + QS DLI+TD
Sbjct: 693 ILVVDDEEAVSALLARLLTDLGHRPTTVASGEAALAAIA---RQSF--------DLILTD 741
Query: 92 YCMPGMTGYELLKKIKVTTPF 112
MPGMTG+EL + IK P
Sbjct: 742 IKMPGMTGFELYQHIKEHNPH 762
>gi|443302653|gb|AGC82268.1| cAMP phosphodiesterase [Dictyostelium lacteum]
Length = 698
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 20 FDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSING 79
F+ SPS VH+L DD + RK++E +L V +G A + L +
Sbjct: 81 FEYSPS---RVHILVADDDVIQRKILENVLKKFHYNV---HNGEEAWECLEKGQ------ 128
Query: 80 FDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFN 113
+K DL++TD MP + G++L KI + FN
Sbjct: 129 ---VKYDLVLTDVMMPEINGFDLCTKINLHPVFN 159
>gi|408419820|ref|YP_006761234.1| two component system response regulator, sigma54-specific
[Desulfobacula toluolica Tol2]
gi|405107033|emb|CCK80530.1| two component system response regulator, sigma54-specific
[Desulfobacula toluolica Tol2]
Length = 444
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P E+ +L VDD+ + +VI+R L +S +V A S A+Q L
Sbjct: 2 PDPVEKEAILIVDDNIITCEVIQRNLKMSGYQVFATHSVPDAIQVL-----------KHR 50
Query: 84 KVDLIITDYCMPGMTGYELLKKI 106
KVDL+ITDY MP TG EL++ +
Sbjct: 51 KVDLLITDYKMPKHTGLELIRYV 73
>gi|392410144|ref|YP_006446751.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
gi|390623280|gb|AFM24487.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
Length = 1125
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 24 PSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGL 83
P+ E + VL VDD+ +R+++E +LT AV SG AL+ L E++ G
Sbjct: 725 PNSLEGISVLVVDDNATNRRILEEVLTQWDMHPVAVSSGMEALR--SLREKRDA----GE 778
Query: 84 KVDLIITDYCMPGMTGYELLKKIKVTTPF 112
DL I D MP M G++L +I+ F
Sbjct: 779 SFDLAIVDCMMPEMNGFQLSAEIRSEPDF 807
>gi|194292537|ref|YP_002008444.1| two-component sensor response receiver component, histidine kinase
[Cupriavidus taiwanensis LMG 19424]
gi|193226441|emb|CAQ72390.1| two-component sensor response receiver component, histidine kinase
[Cupriavidus taiwanensis LMG 19424]
Length = 1122
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ +L VDD +R ++E+ L C+ T DSG AL + + DL++
Sbjct: 876 LEILVVDDHPYNRLLMEQQLDRLGCRATLADSGEAALAL-----------WPQRRFDLVL 924
Query: 90 TDYCMPGMTGYELLKKIK---VTTPFNFLYSTI 119
TD MPGM G EL ++++ VT P L ++I
Sbjct: 925 TDVHMPGMDGNELCRRLRARGVTVPIVGLTASI 957
>gi|409992973|ref|ZP_11276134.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
gi|409936155|gb|EKN77658.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
Length = 1288
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 54/176 (30%)
Query: 26 DTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKV 85
D ++ +L DD V+ +VI L++ + + + +G ++ L L EE G K
Sbjct: 715 DDRQIKILIADDEPVNLQVISNYLSLENYTIVSALNG---IEALALIEE-------GFKP 764
Query: 86 DLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPS 145
DL++ D MP MTGYE+ +K++ F +
Sbjct: 765 DLVLLDLMMPQMTGYEVCEKLRE---------------------------------HFEA 791
Query: 146 NNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
N L P+++++++N ++ + L GA D++ KP+ + + RIK +L
Sbjct: 792 NQL----------PILMLTAKNQVSDLVHGLGVGANDYLTKPISKHELLARIKTHL 837
>gi|398951625|ref|ZP_10674198.1| PAS domain S-box [Pseudomonas sp. GM33]
gi|398156269|gb|EJM44692.1| PAS domain S-box [Pseudomonas sp. GM33]
Length = 1470
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL VDD+ R+++ + +V +SGR AL+ L E+ D L DL++
Sbjct: 979 IRVLVVDDNASAREILSGMAHSFGVEVDVAESGRMALRMLAQAEK------DSLPFDLVL 1032
Query: 90 TDYCMPGMTGYELLKKIK 107
D+ MPGM G E +++++
Sbjct: 1033 MDWRMPGMDGVETVRQMR 1050
>gi|386828527|ref|ZP_10115634.1| signal transduction histidine kinase [Beggiatoa alba B18LD]
gi|386429411|gb|EIJ43239.1| signal transduction histidine kinase [Beggiatoa alba B18LD]
Length = 811
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD+ + +V+ ++L + +V V +G++AL D + DLI+ D
Sbjct: 10 ILIVDDTLANLQVLTQMLNVEGYRVRPVSTGKKALA-----------AIDAMLPDLILLD 58
Query: 92 YCMPGMTGYELLKKIK 107
MP M GYE+ K++K
Sbjct: 59 INMPEMNGYEVCKQLK 74
>gi|417111614|ref|ZP_11964188.1| response regulator receiver protein [Rhizobium etli CNPAF512]
gi|327187968|gb|EGE55200.1| response regulator receiver protein [Rhizobium etli CNPAF512]
Length = 276
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIIT 90
HVL VDDS R ++ L + +V+ +SG +AL+ L + + + L+IT
Sbjct: 143 HVLIVDDSATARALLSSRLKRYNFRVSVAESGGKALEILKANRD----------IGLMIT 192
Query: 91 DYCMPGMTGYELLKKIKVT 109
DY MP + G+EL ++I+
Sbjct: 193 DYNMPDIDGFELTRRIRAN 211
>gi|209965547|ref|YP_002298462.1| sensory/regulatory protein R PFC [Rhodospirillum centenum SW]
gi|209959013|gb|ACI99649.1| sensory/regulatory protein R PFC [Rhodospirillum centenum SW]
Length = 741
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V+D V+R V ++L +V V+SG +AL+ L + +VD+I+ D
Sbjct: 489 VLLVEDEAVNRFVASQILERHGFRVVQVESGPQALELLARE-----------RVDIILMD 537
Query: 92 YCMPGMTGYELLKKIK------VTTPFNFLYSTII 120
MPGM G E+ +I+ TTP L ++++
Sbjct: 538 LGMPGMDGLEVAARIRAMDGPAATTPIVALTASVL 572
>gi|344171158|emb|CCA83633.1| response regulator receiver ATP-binding histidine kinase, cheA
family [blood disease bacterium R229]
Length = 775
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 31 HVLAVDDSFVDRKVIERLLTISSCKVT-AVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
HVL VDDS R++ +LL VT AVD G+D N G DLI+
Sbjct: 650 HVLVVDDSLTVRELERKLLEKRGYAVTVAVD---------GMDGMDGWNALRGTPFDLIV 700
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVF 122
TD MP M G EL+ IK L I+ +
Sbjct: 701 TDIDMPRMDGIELVTLIKRDAALKALPVMIVSY 733
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 52/171 (30%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL V++ R ++ LL S +V AV A + L ++E+S +DL++T+
Sbjct: 68 VLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRIL--EDEKSC-------IDLVLTE 118
Query: 92 YCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLEQD 151
+P +G LL KI
Sbjct: 119 VVLPVHSGTGLLSKI-------------------------------------------MS 135
Query: 152 SSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
L+ IPV++MSS + + + +CL +GA DF+VKP++ +++K + ++ R
Sbjct: 136 HKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWR 186
>gi|156035793|ref|XP_001586008.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154698505|gb|EDN98243.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1059
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 50/191 (26%)
Query: 23 SPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSI----- 77
SP+ H+L V+D+ V++KV+ + L + C V+ + G AL+FL E+S
Sbjct: 890 SPASPTPKHILIVEDNIVNQKVLSKQLRGAGCTVSVANHGLEALEFL----EKSTFSTTL 945
Query: 78 -NGFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSIC 136
G G+ ++++ D MP M G +++I+
Sbjct: 946 PEGDPGIPCNILLMDLEMPIMDGLTCVREIR----------------------------- 976
Query: 137 FCFPFFFPSNNLEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKR 195
E++ +PV+ +++ +I R E G + + KP ++ + V
Sbjct: 977 ----------KWEKEGKVKGRVPVIAVTANARSEQIARAKEAGMDSVVTKPFRIGELVPE 1026
Query: 196 IKDYLTRDVNL 206
++ +L R V L
Sbjct: 1027 MERWLVRGVVL 1037
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 52/173 (30%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL V++ R ++ LL S +V +G +A + L + +N +D+++
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL-----EDLNNH----IDIVL 128
Query: 90 TDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNNLE 149
T+ MP ++G LL KI LN +
Sbjct: 129 TEVIMPYLSGIGLLCKI----------------LNHK----------------------- 149
Query: 150 QDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSDVKRIKDYLTR 202
+ R IPV++MSS + + + +CL GA DF+VKP++ +++K + ++ R
Sbjct: 150 ----SRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWR 198
>gi|120597448|ref|YP_962022.1| response regulator receiver protein [Shewanella sp. W3-18-1]
gi|146294411|ref|YP_001184835.1| response regulator receiver protein [Shewanella putrefaciens CN-32]
gi|386315140|ref|YP_006011305.1| response regulator receiver protein [Shewanella putrefaciens 200]
gi|120557541|gb|ABM23468.1| response regulator receiver protein [Shewanella sp. W3-18-1]
gi|145566101|gb|ABP77036.1| response regulator receiver protein [Shewanella putrefaciens CN-32]
gi|319427765|gb|ADV55839.1| response regulator receiver protein [Shewanella putrefaciens 200]
Length = 265
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 8 ASLRLISDEIDGFDLSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCK-VTAVDSGRRAL 66
A++ L+S D DLS D +V VL VDDS + R VI+R + K +T + G +A+
Sbjct: 125 ATIDLLSH--DELDLSHFDVHDVRVLVVDDSRMARNVIKRTIGNLGIKLITEAEDGAQAI 182
Query: 67 QFLGLDEEQSINGFDGLKVDLIITDYCMPGMTGYELLKKIK 107
+ + N F DL+ITDY MP + G L + I+
Sbjct: 183 ELM------RNNMF-----DLVITDYNMPSIDGLALTQFIR 212
>gi|68637867|emb|CAI36072.1| sensory box histidine kinase/response regulator [Pseudomonas
syringae pv. phaseolicola]
Length = 786
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 22 LSPSDTEEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFD 81
LS +D+ HVL VDD R+V + LL+ V SG AL + L +E
Sbjct: 665 LSYADSCPKHVLLVDDDDAVREVTQLLLSSLGHHVVTASSGHDAL--IKLTQE------- 715
Query: 82 GLKVDLIITDYCMPGMTGYELLKKIKVTTP 111
+D+++TDY MPGMTG +L +I P
Sbjct: 716 ---IDIVVTDYSMPGMTGSDLALEIYTRRP 742
>gi|420245765|ref|ZP_14749333.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
sp. CF080]
gi|398045621|gb|EJL38325.1| diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
sp. CF080]
Length = 454
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
VL VDD+ R + ++ + +V SG+ AL L D+ SI +L+ITD
Sbjct: 143 VLVVDDARWARSGLVEIMQRQNFRVLEALSGKEALDML--DQNPSI--------ELVITD 192
Query: 92 YCMPGMTGYELLKKIKVTTP 111
Y MP M G+EL ++I+ T P
Sbjct: 193 YNMPDMDGHELTRRIRATRP 212
>gi|428225724|ref|YP_007109821.1| LuxR family two component transcriptional regulator [Geitlerinema
sp. PCC 7407]
gi|427985625|gb|AFY66769.1| two component transcriptional regulator, LuxR family [Geitlerinema
sp. PCC 7407]
Length = 218
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L +D R IE L +S V A ++G+ AL+ + + LI+TD
Sbjct: 5 ILVAEDDPGTRLSIEHYLELSGYSVVAAENGKEALELVS-----------SYQPHLIVTD 53
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
MP M GYE +++++ PF L
Sbjct: 54 VVMPQMDGYEFVRRVRQQPPFRLL 77
>gi|410724256|ref|ZP_11363454.1| signal transduction histidine kinase [Clostridium sp. Maddingley
MBC34-26]
gi|410602261|gb|EKQ56742.1| signal transduction histidine kinase [Clostridium sp. Maddingley
MBC34-26]
Length = 706
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
V +L V+DS +++K++E +L C+V ++G+ AL N KVDLI+
Sbjct: 462 VKILLVEDSVINQKLVENILKKQGCQVITANNGKEAL-----------NTLKDTKVDLIL 510
Query: 90 TDYCMPGMTGYELLKKIKVTTPF 112
D +P G E+ K I+ + +
Sbjct: 511 MDVQLPETNGMEVTKVIRESEHY 533
>gi|268591166|ref|ZP_06125387.1| sensor kinase protein RcsC [Providencia rettgeri DSM 1131]
gi|291313393|gb|EFE53846.1| sensor kinase protein RcsC [Providencia rettgeri DSM 1131]
Length = 924
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 13/80 (16%)
Query: 29 EVHVLAVDDSFVDRKVI-ERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
E HVL VDD ++R ++ E+L TI TA+D G AL++L D VD+
Sbjct: 808 EHHVLIVDDHPINRALLSEQLATIGFTTGTAID-GLDALKYL-----------DNHHVDI 855
Query: 88 IITDYCMPGMTGYELLKKIK 107
++TD MP M GY+L K+++
Sbjct: 856 VLTDVNMPNMDGYQLAKELR 875
>gi|428308590|ref|YP_007119567.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428250202|gb|AFZ16161.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 1286
Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 54/174 (31%)
Query: 28 EEVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDL 87
++ ++ VDD V+ +V+ L++ + +T +G AL + EQ G K D+
Sbjct: 878 QQFQIMIVDDEPVNLQVLINHLSLQNYAITQASNGIDALAMI----EQ------GFKPDI 927
Query: 88 IITDYCMPGMTGYELLKKIKVTTPFNFLYSTIIVFLNLQNLFLFILSICFCFPFFFPSNN 147
++ D MP MTGYE+ +K++ FP +
Sbjct: 928 VLLDVMMPRMTGYEVCQKLREK-----------------------------FPAY----- 953
Query: 148 LEQDSSALREIPVVIMSSENILARIDRCLEDGAEDFIVKPVKLSD-VKRIKDYL 200
E+PVV+++++N + + GA D++ KP+ ++ + RIK +L
Sbjct: 954 ---------ELPVVMLTAKNQVTDLVEGFSVGANDYLSKPISKNELLARIKTHL 998
>gi|359432389|ref|ZP_09222769.1| cyclic di-GMP phosphodiesterase Gmr [Pseudoalteromonas sp.
BSi20652]
gi|357920958|dbj|GAA59018.1| cyclic di-GMP phosphodiesterase Gmr [Pseudoalteromonas sp.
BSi20652]
Length = 677
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 29 EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLI 88
E H+L VDD + + R+L + KV SG A+++L + V +I
Sbjct: 2 EPHILLVDDEVNVLRSLRRVLERAGFKVAIATSGPEAIEYLNVK-----------VVPVI 50
Query: 89 ITDYCMPGMTGYELLKKIKVTTP 111
+TD+ MP MTG +LL+++KV P
Sbjct: 51 VTDFRMPNMTGADLLREVKVHWP 73
>gi|298529787|ref|ZP_07017190.1| response regulator receiver modulated diguanylate cyclase
[Desulfonatronospira thiodismutans ASO3-1]
gi|298511223|gb|EFI35126.1| response regulator receiver modulated diguanylate cyclase
[Desulfonatronospira thiodismutans ASO3-1]
Length = 427
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 30 VHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLII 89
+ VL DDS V RK+I LL + + V GR AL L + ++ +++
Sbjct: 137 IKVLVADDSSVSRKIIRDLLEVWNFTVLEAGDGREALDILNRQD----------RIGIVL 186
Query: 90 TDYCMPGMTGYELLKKIKVT 109
DY MP M G EL+K+++ T
Sbjct: 187 ADYNMPEMDGMELVKELRRT 206
>gi|75908541|ref|YP_322837.1| two component LuxR family transcriptional regulator [Anabaena
variabilis ATCC 29413]
gi|75702266|gb|ABA21942.1| two component transcriptional regulator, LuxR family [Anabaena
variabilis ATCC 29413]
Length = 245
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 32 VLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSINGFDGLKVDLIITD 91
+L VDD R I L +S V + G+ AL + + DLI+TD
Sbjct: 23 ILVVDDDLGTRLSISDYLELSGYSVITANDGQEALTMV-----------EVYHPDLIVTD 71
Query: 92 YCMPGMTGYELLKKIKVTTPFNFL 115
MP M GYEL+++++ PF L
Sbjct: 72 IVMPRMNGYELVRRVRQQPPFRLL 95
>gi|89092755|ref|ZP_01165707.1| signal transduction histidine kinase, partial [Neptuniibacter
caesariensis]
gi|89082780|gb|EAR62000.1| signal transduction histidine kinase [Oceanospirillum sp. MED92]
Length = 463
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 24 PSDTE-----EVHVLAVDDSFVDRKVIERLLTISSCKVTAVDSGRRALQFLGLDEEQSIN 78
P+DT+ + VL VDDS +R V + +L + V SG E++I+
Sbjct: 204 PADTQHNLSLKGTVLVVDDSATNRLVAKTMLDNAGVDVICACSG-----------EEAID 252
Query: 79 GFDGLKVDLIITDYCMPGMTGYELLKKIKVTTPF 112
+ G KVDLI+ D MPGM+G E + +K +T +
Sbjct: 253 LYAGNKVDLILMDISMPGMSGVETFQYLKSSTGW 286
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,115,226,007
Number of Sequences: 23463169
Number of extensions: 170874128
Number of successful extensions: 1337979
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 10602
Number of HSP's that attempted gapping in prelim test: 1308185
Number of HSP's gapped (non-prelim): 33449
length of query: 276
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 136
effective length of database: 9,074,351,707
effective search space: 1234111832152
effective search space used: 1234111832152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)